Your job contains 1 sequence.
>026925
MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG
RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA
VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD
LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVGC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026925
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2153564 - symbol:AT5G05450 species:3702 "Arabi... 852 3.8e-85 1
TAIR|locus:2825324 - symbol:AT1G71370 species:3702 "Arabi... 725 1.1e-71 1
UNIPROTKB|E2R316 - symbol:DDX55 "Uncharacterized protein"... 480 1.0e-45 1
UNIPROTKB|F1P8J6 - symbol:DDX55 "Uncharacterized protein"... 480 1.0e-45 1
UNIPROTKB|F6XWM4 - symbol:DDX55 "Uncharacterized protein"... 480 2.5e-45 1
UNIPROTKB|F1NJA0 - symbol:DDX55 "ATP-dependent RNA helica... 475 3.4e-45 1
UNIPROTKB|Q5ZLN8 - symbol:DDX55 "ATP-dependent RNA helica... 475 3.4e-45 1
UNIPROTKB|F1MW45 - symbol:DDX55 "ATP-dependent RNA helica... 472 7.1e-45 1
UNIPROTKB|Q2NL08 - symbol:DDX55 "ATP-dependent RNA helica... 472 7.1e-45 1
MGI|MGI:1915098 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) bo... 471 9.1e-45 1
UNIPROTKB|F5H5U2 - symbol:DDX55 "ATP-dependent RNA helica... 470 1.2e-44 1
UNIPROTKB|Q8NHQ9 - symbol:DDX55 "ATP-dependent RNA helica... 470 1.2e-44 1
RGD|2324094 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box po... 466 3.1e-44 1
UNIPROTKB|F1RFL5 - symbol:DDX55 "Uncharacterized protein"... 465 3.9e-44 1
ZFIN|ZDB-GENE-021212-1 - symbol:ddx55 "DEAD (Asp-Glu-Ala-... 464 5.0e-44 1
TAIR|locus:2032338 - symbol:AT1G71280 species:3702 "Arabi... 440 1.7e-41 1
DICTYBASE|DDB_G0291588 - symbol:ddx55 "DEAD/DEAH box heli... 355 1.8e-35 2
FB|FBgn0037561 - symbol:CG9630 species:7227 "Drosophila m... 378 1.9e-34 1
ASPGD|ASPL0000034540 - symbol:spb4 species:162425 "Emeric... 321 7.5e-33 2
POMBASE|SPBC24C6.02 - symbol:SPBC24C6.02 "ATP-dependent R... 329 4.8e-29 1
CGD|CAL0000625 - symbol:SPB4 species:5476 "Candida albica... 325 1.5e-28 1
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 324 4.5e-28 1
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 322 7.3e-28 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 316 1.3e-27 1
SGD|S000001894 - symbol:SPB4 "Putative ATP-dependent RNA ... 315 1.7e-27 1
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 317 2.5e-27 1
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 316 3.2e-27 1
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 315 3.8e-27 1
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 315 4.1e-27 1
WB|WBGene00013983 - symbol:ZK512.2 species:6239 "Caenorha... 309 6.3e-27 1
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 305 4.9e-26 1
GENEDB_PFALCIPARUM|PFF1500c - symbol:PFF1500c "DEAD/DEAH ... 300 7.0e-26 1
UNIPROTKB|C6KTE4 - symbol:PFF1500c "DEAD/DEAH box ATP-dep... 300 7.0e-26 1
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 302 1.0e-25 1
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 302 1.0e-25 1
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 290 1.4e-25 1
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 297 1.5e-25 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 272 2.5e-25 2
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 295 4.4e-25 1
UNIPROTKB|Q8EIE5 - symbol:dbpA "ATP-dependent RNA helicas... 287 5.8e-25 1
TIGR_CMR|SO_0897 - symbol:SO_0897 "ATP-dependent RNA heli... 287 5.8e-25 1
UNIPROTKB|F1SV16 - symbol:F1SV16 "Uncharacterized protein... 279 2.0e-24 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 244 2.2e-24 2
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 282 8.0e-24 1
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 284 8.8e-24 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 278 9.8e-24 1
POMBASE|SPAC823.08c - symbol:SPAC823.08c "ATP-dependent R... 249 1.6e-23 2
FB|FBgn0030855 - symbol:CG5800 species:7227 "Drosophila m... 281 1.6e-23 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 251 1.7e-23 2
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 277 2.0e-23 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 278 2.2e-23 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 277 2.8e-23 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 277 2.9e-23 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 245 3.0e-23 2
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 249 3.8e-23 2
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 274 3.9e-23 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 274 3.9e-23 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 273 4.5e-23 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 275 4.7e-23 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 246 4.9e-23 2
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 274 5.7e-23 1
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 274 6.3e-23 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 245 7.4e-23 2
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 274 8.1e-23 1
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 273 9.5e-23 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 272 9.9e-23 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 272 1.0e-22 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 272 1.0e-22 1
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 272 1.0e-22 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 272 1.1e-22 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 271 1.3e-22 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 240 1.8e-22 2
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 240 1.8e-22 2
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 240 1.9e-22 2
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 240 1.9e-22 2
TIGR_CMR|VC_2564 - symbol:VC_2564 "ATP-dependent RNA heli... 249 2.1e-22 2
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 266 2.5e-22 1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel... 263 2.8e-22 1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he... 263 2.8e-22 1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 247 2.8e-22 2
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 267 3.1e-22 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 268 3.8e-22 1
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 258 5.2e-22 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 240 5.2e-22 2
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 266 6.5e-22 1
TAIR|locus:2160225 - symbol:AT5G54910 species:3702 "Arabi... 262 1.5e-21 1
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 258 2.2e-21 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 254 2.9e-21 1
TIGR_CMR|CPS_1125 - symbol:CPS_1125 "ATP-dependent RNA he... 254 3.2e-21 1
UNIPROTKB|Q83DM8 - symbol:rhlE "ATP-dependent RNA helicas... 251 4.4e-21 1
TIGR_CMR|CBU_0670 - symbol:CBU_0670 "ATP-dependent RNA he... 251 4.4e-21 1
UNIPROTKB|Q48AV0 - symbol:CPS_0042 "ATP-dependent RNA hel... 250 5.8e-21 1
TIGR_CMR|CPS_0042 - symbol:CPS_0042 "ATP-dependent RNA he... 250 5.8e-21 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 223 6.1e-21 2
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 256 7.3e-21 1
ASPGD|ASPL0000062195 - symbol:AN10125 species:162425 "Eme... 256 7.7e-21 1
TAIR|locus:2173517 - symbol:AT5G60990 species:3702 "Arabi... 249 1.1e-20 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 256 1.2e-20 1
UNIPROTKB|E2R4Z9 - symbol:DDX59 "Uncharacterized protein"... 251 1.3e-20 1
UNIPROTKB|E2R4Y9 - symbol:DDX59 "Uncharacterized protein"... 251 1.6e-20 1
WARNING: Descriptions of 701 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 170/227 (74%), Positives = 195/227 (85%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QIY+VAQPF+STL +V SVLLVGG EVKAD+K IEEEG N+LIGTPG
Sbjct: 92 MGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIMERM++LDFRNLEIL+LDEADRLL+MGFQ+Q++YIISRLPK RRTGLFSATQTE
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEG 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
VEEL+KAGLRNPVRVEVRA+SKS SSQQL +SKTP GLHLEY+ECE D+K SQLVD
Sbjct: 212 VEELAKAGLRNPVRVEVRAKSKSE----SSQQLTNSKTPSGLHLEYMECEADKKSSQLVD 267
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
LL +FMTCA VDYWG+VL ++ LKS+SLIP+HG MKQ
Sbjct: 268 LLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQ 314
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 150/229 (65%), Positives = 177/229 (77%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+PF+STLP+V SVLLVGG EV+AD+ +EEEGANLLIGTPG
Sbjct: 92 MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
V +L+KAGLRN + V AESKS KT GL+ EYL+CE D+K SQLV
Sbjct: 212 VADLAKAGLRNAMEVISGAESKS-------------KTSSGLYCEYLKCEADQKSSQLVH 258
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVG 229
LL +FMTCACVDYWG+VL ++ LKS+S HGKM Q G
Sbjct: 259 LLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKG 307
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ Q+ V F + P +L +GG DV + +E+G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRL 145
Query: 63 YDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R ++ LD ++LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVESLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENYYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A++KS+ ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLIFFSTCACVEYYGKALE--ALVKSVKIMCIHGKMK 304
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ Q+ V F + P +L +GG DV + +E+G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRL 145
Query: 63 YDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R ++ LD ++LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVESLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENYYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A++KS+ ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLIFFSTCACVEYYGKALE--ALVKSVKIMCIHGKMK 304
>UNIPROTKB|F6XWM4 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969
Ensembl:ENSCAFT00000035837 EMBL:AAEX03014637 OMA:DADNVFA
Uniprot:F6XWM4
Length = 734
Score = 480 (174.0 bits), Expect = 2.5e-45, P = 2.5e-45
Identities = 107/229 (46%), Positives = 147/229 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ Q+ V F + P +L +GG DV + +E+G N+++ TPGRL
Sbjct: 221 IIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGRL 280
Query: 63 YDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R ++ LD ++LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 281 EDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 340
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 341 TQEVESLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENYYMVCKADEKFNQ 392
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A++KS+ ++ +HGKMK
Sbjct: 393 LVHFLRNHKQEKHLIFFSTCACVEYYGKALE--ALVKSVKIMCIHGKMK 439
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 106/229 (46%), Positives = 145/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I++ LPK RRTGLFSATQ
Sbjct: 146 EDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+A++ Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAATNTQ----KTPTRLENYYMICKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRQHKQEKHLVFFSTCACVEYYGKALESL--IKQVKIMCIHGKMK 304
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 106/229 (46%), Positives = 145/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I++ LPK RRTGLFSATQ
Sbjct: 146 EDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+A++ Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAATNTQ----KTPTRLENYYMICKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRQHKQEKHLVFFSTCACVEYYGKALESL--IKQVKIMCIHGKMK 304
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 108/229 (47%), Positives = 142/229 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGRL
Sbjct: 86 IIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENHYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLVFFSTCACVEYYGKALETL--VKGVKIMCIHGKMK 304
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 108/229 (47%), Positives = 142/229 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGRL
Sbjct: 86 IIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENHYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLVFFSTCACVEYYGKALETL--VKGVKIMCIHGKMK 304
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/229 (45%), Positives = 144/229 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENHYMICKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A+LK + ++ +HGKMK
Sbjct: 258 LVHFLRSRQQEKHLVFFSTCACVEYYGKALE--ALLKKVKILCIHGKMK 304
>UNIPROTKB|F5H5U2 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AC055713 EMBL:AC117503
HGNC:HGNC:20085 ChiTaRS:DDX55 IPI:IPI01010332
ProteinModelPortal:F5H5U2 SMR:F5H5U2 Ensembl:ENST00000538744
ArrayExpress:F5H5U2 Bgee:F5H5U2 Uniprot:F5H5U2
Length = 569
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 107/229 (46%), Positives = 145/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVRV V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRVSVKEKG----VAASSAQ----KTPSRLENYYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLVFFSTCACVEYYGKALEVL--VKGVKIMCIHGKMK 304
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 107/229 (46%), Positives = 145/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVRV V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRVSVKEKG----VAASSAQ----KTPSRLENYYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLVFFSTCACVEYYGKALEVL--VKGVKIMCIHGKMK 304
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 102/229 (44%), Positives = 145/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGRL
Sbjct: 86 IVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGRL 145
Query: 63 YDIMER----MDVLDF-RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R +D+ + ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + V+ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----VAASSTQ----KTPSRLENHYMICKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A+++ + ++ +HGKMK
Sbjct: 258 LVHFLRSRQQEKHLVFFSTCACVEYYGKALE--ALVQRVKILCIHGKMK 304
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 105/229 (45%), Positives = 143/229 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGRL
Sbjct: 86 IIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIIVATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ VE L +AGLRNPVR+ V+ + +ASS Q KTP L Y+ C+ DEK +Q
Sbjct: 206 TQEVENLVRAGLRNPVRISVKEKG----AAASSTQ----KTPSRLENYYMVCKADEKFNQ 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L A+++S+ ++ +HGKMK
Sbjct: 258 LVHFLRNHKQEKHLVFFSTCACVEYYGKALE--ALVRSVKIMCIHGKMK 304
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 107/229 (46%), Positives = 146/229 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F+ P +LL+GG DV+K++ +GAN++I TPGRL
Sbjct: 86 LIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGRL 145
Query: 63 YDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSATQ
Sbjct: 146 EDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSATQ 205
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
T+ +E+L +AGLRNPVR+ V+ + V+ASS Q KTP L Y C +EK +
Sbjct: 206 TQELEKLVRAGLRNPVRITVKEKG----VAASSVQ----KTPAKLSNYYTMCRAEEKFNT 257
Query: 178 LVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
LV L +F TCACV+Y+G L L +K++S+ +HGKMK
Sbjct: 258 LVAFLRQHKHEKQLVFFSTCACVEYFGKALEVL--VKNVSIHCIHGKMK 304
>TAIR|locus:2032338 [details] [associations]
symbol:AT1G71280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008266
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC016162
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
IPI:IPI00539204 PIR:E96737 RefSeq:NP_177284.1 UniGene:At.70351
ProteinModelPortal:Q9FVV4 SMR:Q9FVV4 PRIDE:Q9FVV4
EnsemblPlants:AT1G71280.1 GeneID:843469 KEGG:ath:AT1G71280
GeneFarm:1442 TAIR:At1g71280 InParanoid:Q9FVV4 OMA:NDASIVC
PhylomeDB:Q9FVV4 ArrayExpress:Q9FVV4 Genevestigator:Q9FVV4
Uniprot:Q9FVV4
Length = 465
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/143 (65%), Positives = 114/143 (79%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+ + EV+AD+ +EEEGANLLIGTPG
Sbjct: 93 MGVIISPTRELSAQIHKVARAVRLDFAKCR--------EVEADMNTLEEEGANLLIGTPG 144
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 145 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 204
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V +L+KAGLRNP ++ A+ KS
Sbjct: 205 VADLAKAGLRNPY-LKCEADQKS 226
Score = 216 (81.1 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 58/167 (34%), Positives = 81/167 (48%)
Query: 68 RMDVLDFRNLE--ILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELS 125
R+D R +E + L+E L +G ++S ++ R+ L L EA + L
Sbjct: 115 RLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEA-DRLL 173
Query: 126 KAGLRNPVRVEVRAESKSHHV---SASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
G + V + K SA+ Q + GL YL+CE D+K SQLV LL
Sbjct: 174 DMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLL 233
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVG 229
+FMTCACVDYWG+V+ ++ LKS+S P HGKM Q G
Sbjct: 234 IENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKG 280
>DICTYBASE|DDB_G0291588 [details] [associations]
symbol:ddx55 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0291588 GO:GO:0005524
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14809
OMA:HEKKVET RefSeq:XP_635318.1 ProteinModelPortal:Q54EC2
STRING:Q54EC2 EnsemblProtists:DDB0234215 GeneID:8628262
KEGG:ddi:DDB_G0291588 ProtClustDB:CLSZ2429585 Uniprot:Q54EC2
Length = 663
Score = 355 (130.0 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 82/202 (40%), Positives = 116/202 (57%)
Query: 28 DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLD----FRNLEILVLD 83
++ S+LL+GG ++ D+ + G N+LIGTPGR + + R+ D F+ E+L+LD
Sbjct: 155 EISSLLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKFKEFEMLILD 214
Query: 84 EADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
EADRLLDMGF I+ I+ +LPK RRTGLFSATQT V+EL++ G+RNP +V V +
Sbjct: 215 EADRLLDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELARTGMRNPFKVSVSVK--- 271
Query: 144 HHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD-LLXXXXXXXXXXYFMTCACVDY 202
H+ Q P L Y+ +E+ +QLV LL YF+TC+ VDY
Sbjct: 272 -HIETHEDQ----SIPTTLDNRYMIVPVEERLNQLVHFLLNHIDKNKIIIYFLTCSTVDY 326
Query: 203 WGVVLPRLAVLKSLSLIPLHGK 224
+ +L + VL LHGK
Sbjct: 327 FFKILQSVKVLSGKPFFSLHGK 348
Score = 58 (25.5 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 3 MIISPTRELSSQIYHVAQPFISTL 26
+IISPTREL+ QI V F++ L
Sbjct: 87 IIISPTRELAIQIQQVLLEFLNDL 110
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 378 (138.1 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 96/233 (41%), Positives = 132/233 (56%)
Query: 3 MIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++ISPTREL+ QI V F+ L + L+VGG ++ D+ + E +L+ TPG
Sbjct: 86 LVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTPG 145
Query: 61 RLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
RL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFSA
Sbjct: 146 RLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFSA 205
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
TQT V +L +AGLRNPV V V+ + AS TP L Y EP+ K
Sbjct: 206 TQTTEVTDLIRAGLRNPVLVSVKEK-------------ASVNTPARLQNFYRIVEPELKF 252
Query: 176 SQLVDLLXXXXXXXXXX--YFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
L++ L +F TCACV+YW LP L L +++ +HGKMK
Sbjct: 253 VALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPL--LPKRTVLGIHGKMK 303
>ASPGD|ASPL0000034540 [details] [associations]
symbol:spb4 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001306 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AACD01000052
HOGENOM:HOG000268803 KO:K14809 OMA:CACVEYW RefSeq:XP_660780.1
ProteinModelPortal:Q5B8F4 STRING:Q5B8F4
EnsemblFungi:CADANIAT00009893 GeneID:2873958 KEGG:ani:AN3176.2
OrthoDB:EOG46MFT3 Uniprot:Q5B8F4
Length = 638
Score = 321 (118.1 bits), Expect = 7.5e-33, Sum P(2) = 7.5e-33
Identities = 81/204 (39%), Positives = 111/204 (54%)
Query: 24 STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVL-DFRNLEILVL 82
S L V +LL G D+ + NLL+ TPGRL +++ V + E+LVL
Sbjct: 137 SVLRVVPQLLLGGSTSPAEDLSTFLKRSPNLLVATPGRLLELLSSPHVYCPQSSFEMLVL 196
Query: 83 DEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
DEADRLLD+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ +
Sbjct: 197 DEADRLLDLGFKETLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVVVKVKGA 256
Query: 143 SHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLLXXXXXXXXXXYFM--TCACV 200
S + +TP L + YL P K L +L F TC+ V
Sbjct: 257 SG--------VDDKRTPASLQMTYLTQPPTGKFPALKHILNSVQPTPSKSIFFVSTCSGV 308
Query: 201 DYWGVVLPRLAVLKSLSLIPLHGK 224
DY V+LP L + LIPLHGK
Sbjct: 309 DYLSVILP-LILGNDFQLIPLHGK 331
Score = 68 (29.0 bits), Expect = 7.5e-33, Sum P(2) = 7.5e-33
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVL 33
+I+SPTREL+SQIY+V ++ P +V+
Sbjct: 91 IIVSPTRELASQIYNVLTSLLAFHPASAAVI 121
>POMBASE|SPBC24C6.02 [details] [associations]
symbol:SPBC24C6.02 "ATP-dependent RNA helicase Spb4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC24C6.02 GO:GO:0005524 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
OMA:CACVEYW OrthoDB:EOG46MFT3 PIR:T39966 RefSeq:NP_595956.1
ProteinModelPortal:O74764 STRING:O74764 EnsemblFungi:SPBC24C6.02.1
GeneID:2540598 KEGG:spo:SPBC24C6.02 NextBio:20801723 Uniprot:O74764
Length = 606
Score = 329 (120.9 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 85/234 (36%), Positives = 129/234 (55%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDV-----KSV--LLVGGV-EVKADVKKIEEEGANL 54
+I++PTREL++QI++V + ++ PD K V + +GG + D+ E+ ++
Sbjct: 76 LIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFREKNPSV 135
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
+IGTPGRL +++ + ++LEIL+LDEAD L+DMGFQ+ + IIS+LPK RRTGLFS
Sbjct: 136 VIGTPGRLNEMLSH---ISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLFS 192
Query: 115 ATQTEAVEELSK-AGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDE 173
AT + V K AGLRN VRV V SK ++TP L ++ L P
Sbjct: 193 ATMNDTVSSFLKIAGLRNSVRVSVTVTSKK----------IDTRTPSSLAIQSLVIPPIY 242
Query: 174 KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
K ++ LL +F +CA V+Y+ + L ++ LHG+ Q
Sbjct: 243 KVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLF--LTYKLPFEIVALHGQQVQ 294
>CGD|CAL0000625 [details] [associations]
symbol:SPB4 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K14809 EMBL:AACQ01000202 EMBL:AACQ01000200
RefSeq:XP_711358.1 RefSeq:XP_711406.1 ProteinModelPortal:Q59NP8
STRING:Q59NP8 GeneID:3647008 GeneID:3647042 KEGG:cal:CaO19.11631
KEGG:cal:CaO19.4154 CGD:CAL0005749 Uniprot:Q59NP8
Length = 631
Score = 325 (119.5 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 80/235 (34%), Positives = 129/235 (54%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSV-----LLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ K LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEK 174
AT + A + + G+ NPV+V+V+ SK++ +Q S +P L L Y+ P+ K
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVK--SKNYF----GEQ---SNSPKSLQLSYMMINPELK 265
Query: 175 PSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKS----LSLIPLHGKM 225
+ L+ +L YF TC V ++ + ++ +S L LHG++
Sbjct: 266 ITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQL 320
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 324 (119.1 bits), Expect = 4.5e-28, P = 4.5e-28
Identities = 84/226 (37%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+NP V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKNPEYVWVHEKAKY-------------STPATLEQNYIVCELQQKISVLYSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +SL+ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGVSLLALHGRQQQM 352
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 322 (118.4 bits), Expect = 7.3e-28, P = 7.3e-28
Identities = 82/226 (36%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+NP + V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKNPEYIWVHEKAKY-------------STPATLEQNYIVCELQQKISVLYSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGISILALHGRQQQM 352
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 316 (116.3 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 80/226 (35%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 204 IVVSPTRELALQIFGVARELLTAHSQTYGIV-IGGANRRAEAEKLTK-GVNLLIATPGRL 261
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ II LP R+T LFSATQT V
Sbjct: 262 LDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQTTKV 321
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H T GL Y+ CE D++ L
Sbjct: 322 EDLARISLR-PGPLYINVDHRKEH-----------STVEGLEQGYVICEADKRFLLLFSF 369
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C CV Y +L + L ++ LHGK KQ
Sbjct: 370 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLDLHGKQKQ 411
>SGD|S000001894 [details] [associations]
symbol:SPB4 "Putative ATP-dependent RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000470 "maturation of LSU-rRNA" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001894
GO:GO:0005524 GO:GO:0005730 EMBL:D50617 EMBL:BK006940 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 GeneTree:ENSGT00550000074969
OMA:MDSSANI OrthoDB:EOG46MFT3 EMBL:X16147 PIR:S14942
RefSeq:NP_116654.1 ProteinModelPortal:P25808 SMR:P25808
DIP:DIP-5423N IntAct:P25808 MINT:MINT-525740 STRING:P25808
PaxDb:P25808 EnsemblFungi:YFL002C GeneID:850549 KEGG:sce:YFL002C
CYGD:YFL002c NextBio:966324 Genevestigator:P25808
GermOnline:YFL002C Uniprot:P25808
Length = 606
Score = 315 (115.9 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 87/234 (37%), Positives = 118/234 (50%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLLI 56
+II+PTRELS QI V F+ P +K LLVG E V+ DV +LI
Sbjct: 87 LIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQILI 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
A ++ K GLRNPVR+ V +++++ P L L Y P EK
Sbjct: 206 MRSAGSDIFKTGLRNPVRITVNSKNQA---------------PSSLKLNYCVVNPAEKLQ 250
Query: 177 QLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLA----VLKSLSLIPLHGKMK 226
LV +L YF TC V Y+ + L ++ + + LHGK++
Sbjct: 251 LLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQ 304
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 317 (116.6 bits), Expect = 2.5e-27, P = 2.5e-27
Identities = 82/226 (36%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKDPEYVWVHEKAKY-------------STPATLEQNYIICELHQKISVLFSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLTKKSIVFFSSCKEVQYLYRVFCRLR--PGISILALHGRQQQM 352
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 316 (116.3 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 82/226 (36%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKDPEYVWVHEKAKY-------------STPATLEQNYIICELHQKISVLFSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGISILALHGRQQQM 352
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 315 (115.9 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 81/226 (35%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+NP V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKNPEYVWVHEKAKY-------------STPATLEQNYIVCELQQKISVLYSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGVSILALHGRQQQM 352
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 315 (115.9 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 81/226 (35%), Positives = 124/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+NP V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKNPEYVWVHEKAKY-------------STPATLEQNYIVCELQQKISVLYSFL 308
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGVSILALHGRQQQM 352
>WB|WBGene00013983 [details] [associations]
symbol:ZK512.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017038 "protein import" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:Z22177 eggNOG:COG0513 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809 PIR:B88549 PIR:S40763
RefSeq:NP_001254980.1 ProteinModelPortal:P34640 SMR:P34640
STRING:P34640 PaxDb:P34640 EnsemblMetazoa:ZK512.2a.1
EnsemblMetazoa:ZK512.2a.2 GeneID:176292 KEGG:cel:CELE_ZK512.2
UCSC:ZK512.2 CTD:176292 WormBase:ZK512.2
GeneTree:ENSGT00550000074969 InParanoid:P34640 OMA:HEKKVET
NextBio:891956 Uniprot:P34640
Length = 578
Score = 309 (113.8 bits), Expect = 6.3e-27, P = 6.3e-27
Identities = 79/225 (35%), Positives = 119/225 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SP+REL SQI V QPF L ++ + GG +V ++K + + N+L+ TPGRL
Sbjct: 84 LILSPSRELCSQIVSVIQPFAEKL-NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRL 142
Query: 63 YDIMERMDVL---DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
+ I++ L R L++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ +
Sbjct: 143 FQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQVK 202
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLV 179
++L GLRN +V+V E +S P L Y+EC DEK S +
Sbjct: 203 EEDDLMVFGLRNAKQVKVAQER-------------NSAAPSTLKNYYVECRADEKTSVCL 249
Query: 180 DLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGK 224
+ + +F +C V Y+ + R L L +HGK
Sbjct: 250 EFIRQRTDKKILIFFPSCNSVRYFYKIFERC--LGKRPLFAVHGK 292
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 305 (112.4 bits), Expect = 4.9e-26, P = 4.9e-26
Identities = 79/226 (34%), Positives = 121/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + +KI N++I TPGRL
Sbjct: 146 LIISPTRELAYQTFEVLRK-VGKNHEFSAGLVIGGKDLKDESEKIHR--TNIIICTPGRL 202
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L +LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT +V+
Sbjct: 203 LQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTRSVK 262
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE +K + L L
Sbjct: 263 DLARLSLKDPEYVWVHEQAKF-------------STPATLEQNYVVCELHQKVNMLYSFL 309
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F C V Y + RL +S++ LHGK +Q+
Sbjct: 310 RSHLQKKIIVFFACCKEVQYLFRIFCRLR--PGISVLALHGKQQQM 353
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 300 (110.7 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 63/135 (46%), Positives = 87/135 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + KK G N+LI TPGRL
Sbjct: 224 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKKFIH-GINILIATPGRL 281
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ II RLPK R+T LFSATQT VE
Sbjct: 282 LDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQTALFSATQTTKVE 341
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 342 SLIRLSLQKPIFIEV 356
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 300 (110.7 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 63/135 (46%), Positives = 87/135 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + KK G N+LI TPGRL
Sbjct: 224 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKKFIH-GINILIATPGRL 281
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ II RLPK R+T LFSATQT VE
Sbjct: 282 LDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQTALFSATQTTKVE 341
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 342 SLIRLSLQKPIFIEV 356
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 302 (111.4 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 80/226 (35%), Positives = 122/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+LI TPGRL
Sbjct: 149 LIISPTRELAFQTFKVLRK-VGKNHDFSAGLIIGGKDLKEESERIHH--INMLICTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE K + L L
Sbjct: 266 DLARLSLKDPEYVWVHEKAKF-------------STPATLDQNYIVCELQHKINVLYSFL 312
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V +L L ++ LHGK +Q+
Sbjct: 313 RSHLKKKSIVFFASCKEVQYLFRVFCKLQ--PGLPVLALHGKQQQM 356
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 302 (111.4 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 80/226 (35%), Positives = 122/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+LI TPGRL
Sbjct: 149 LIISPTRELAFQTFKVLRK-VGKNHDFSAGLIIGGKDLKEESERIHH--INMLICTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE K + L L
Sbjct: 266 DLARLSLKDPEYVWVHEKAKF-------------STPATLDQNYIVCELQHKINVLYSFL 312
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+F +C V Y V +L L ++ LHGK +Q+
Sbjct: 313 RSHLKKKSIVFFASCKEVQYLFRVFCKLQ--PGLPVLALHGKQQQM 356
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 70/160 (43%), Positives = 105/160 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+SQI + L +K+ ++ GGV +A V IE G ++L+ TPGRL
Sbjct: 79 LILTPTRELASQIMQNIDDYSDGL-GLKTKVVYGGVGRQAQVDSIEL-GLDILVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++E D+ +F+ LE+ VLDEAD +LDMGF K + IIS+LPK R+T LFSAT +E
Sbjct: 137 LDLIETGDI-NFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIE 195
Query: 123 ELSKAGLRNPVRVEVRAESKSHH-VSASSQQL-ASSKTPL 160
L++A L +P ++++ AE+ + V+ S L S+K PL
Sbjct: 196 ILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPL 235
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 77/226 (34%), Positives = 123/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + ++ +GG K + +++E+ G NLL+ TPGRL
Sbjct: 195 IIISPTRELALQIYGVARELMKYHTQTHGIV-IGGASKKPEEERLEK-GVNLLVATPGRL 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ +NL+ L++DEADR+L++GF++++ II ++PK R+T LFSATQT V+
Sbjct: 253 LDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTRQTMLFSATQTRKVD 312
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+++K L N PV V V E + +S T GL Y+ C + + L
Sbjct: 313 DIAKVSLNNSPVYVGVDDERE---IS----------TVEGLEQGYVVCPSERRFLLLYTF 359
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L + +C V Y +L + + ++ LHG+ KQ
Sbjct: 360 LKKNLSKKIIVFLSSCNAVKYTAELLNYI----DIPVLELHGRQKQ 401
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 272 (100.8 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 67/167 (40%), Positives = 97/167 (58%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL+ QI + ST+ V+ ++VGG+++ A + ++ ++++ TPGR
Sbjct: 117 GLVLAPTRELAYQISQAFETLGSTI-GVRCAVIVGGMDMVAQSIALGKK-PHIIVATPGR 174
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D +E RNL+ L +DEADRLLDM F + + II LP+ R T LFSAT + V
Sbjct: 175 LLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFSATMSTKV 234
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSA-SSQQLASSKTPLGLHLEYL 167
E L +A L NPVRV V SK VS S + L+L YL
Sbjct: 235 ESLQRASLSNPVRVSV--SSKYQTVSTLQSSYICIPHKHKNLYLVYL 279
Score = 39 (18.8 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 209 RLA-VLKSLSL--IPLHGKMKQ 227
R+A +L++L IPLHG++ Q
Sbjct: 300 RVAFMLRALGFGAIPLHGQLSQ 321
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 295 (108.9 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 79/225 (35%), Positives = 121/225 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR+
Sbjct: 124 LIVSPTRELAVQIFEVLTK-IGKYNTFSAGLVTGGKDVQFEKERVSR--MNILVGTPGRI 180
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+E+V
Sbjct: 181 SQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFSATQSESVN 240
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L NP ++ V +S Q++ S TP L Y++ DEK L +
Sbjct: 241 DLARLSLTNPNKIGV----------SSDQEV--SATPESLEQYYVKVPLDEKLDVLWSFI 288
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+F + V Y L +SL+ L+G+ KQ
Sbjct: 289 KSHLKSKILVFFSSSKQVQYTYETFRTLQ--PGISLMKLYGRHKQ 331
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 287 (106.1 bits), Expect = 5.8e-25, P = 5.8e-25
Identities = 64/171 (37%), Positives = 104/171 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 132 VDHLDR-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPL-GLHLEYLECEPD 172
++K + NPV V+ + + + QL K+ + L L LE +P+
Sbjct: 191 SIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPE 241
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 287 (106.1 bits), Expect = 5.8e-25, P = 5.8e-25
Identities = 64/171 (37%), Positives = 104/171 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 132 VDHLDR-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPL-GLHLEYLECEPD 172
++K + NPV V+ + + + QL K+ + L L LE +P+
Sbjct: 191 SIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPE 241
>UNIPROTKB|F1SV16 [details] [associations]
symbol:F1SV16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000016375 OMA:SAREVPM Uniprot:F1SV16
Length = 301
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 62/144 (43%), Positives = 94/144 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERINN--INILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+L++ L+NP V V ++K +V
Sbjct: 262 DLARLSLKNPEYVWVHEKAKYRYV 285
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 244 (91.0 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 52/141 (36%), Positives = 89/141 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S + + +V+ VGGV++ A + ++++ TPGRL
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVI-VGGVDMAAQAMALARR-PHIIVATPGRL 173
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + + L+ L++DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+ V
Sbjct: 174 VDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVS 233
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+L +A LR+P RV V + K+
Sbjct: 234 KLERASLRDPARVSVSSRYKT 254
Score = 62 (26.9 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 25/82 (30%), Positives = 34/82 (41%)
Query: 146 VSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGV 205
VS SS+ KT L Y+ K + LV LL + TCA V
Sbjct: 246 VSVSSRY----KTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAV 301
Query: 206 VLPRLAVLKSLSLIPLHGKMKQ 227
+L +L + +PLHG+M Q
Sbjct: 302 MLRQLG----MQAVPLHGQMSQ 319
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 282 (104.3 bits), Expect = 8.0e-24, P = 8.0e-24
Identities = 76/226 (33%), Positives = 120/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q Y V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 242 IILSPTRELAMQTYGVLKELMNHHVHTYG-LIMGGSNRSAEAQKLGN-GINIIVATPGRL 299
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+L++GF++++ II LPK R+T LFSATQT VE
Sbjct: 300 LDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVE 359
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L+K L+ P+ V V ++ V GL Y+ C +++ L
Sbjct: 360 DLAKISLKKEPLYVGVDDNKETATVD-------------GLEQGYVVCPSEKRFLLLFTF 406
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HGK KQ
Sbjct: 407 LKKNRKKKLMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQ 448
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 284 (105.0 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 75/225 (33%), Positives = 118/225 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ V + + + L++GG V+ + KI N+LI TPGRL
Sbjct: 217 IVLSPTRELAIQIFDVLKA-VGKYHTFSAGLIIGGRNVQQEKDKIN--AMNILIATPGRL 273
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ D NL+ILVLDEADR+LD+GF K ++ I+ LP+ R+T LFSATQT+++
Sbjct: 274 LQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRERQTLLFSATQTKSIR 333
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+ P + V + ++ + Q L + + L + K + L +
Sbjct: 334 DLARLSLQEPEYISVYEKD----ITTTPQNLTQTLCVIPLEM---------KLNMLFSFI 380
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+F +C V + L +L PLHGKMKQ
Sbjct: 381 KTHLTSKIIVFFASCKQVRFAHETFKLLN--PGTTLFPLHGKMKQ 423
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 278 (102.9 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 74/227 (32%), Positives = 122/227 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI+ VA+ + ++ +GG + + +K+ + G N+LI TPGRL
Sbjct: 118 IVITPTRELALQIFGVARELMEFHSQTFGIV-IGGANRRQEAEKLMK-GVNMLIATPGRL 175
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F+NL+ L++DEADR+L++GF+ ++ II LP R++ LFSATQT V
Sbjct: 176 LDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKV 235
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ LR P+ + V E+ + T GL Y+ C+ D++ L
Sbjct: 236 EDLARISLRPGPLFINVVPET-------------DNSTADGLEQGYVVCDSDKRFLLLFS 282
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L + +C V Y+ +L + L ++ LHGK KQ
Sbjct: 283 FLKRNQKKKIIVFLSSCNSVKYYAELLNYI----DLPVLELHGKQKQ 325
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 249 (92.7 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 56/138 (40%), Positives = 87/138 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + ++ V+SV++VGG+++ + ++ ++L+ TPGRL
Sbjct: 118 VVLAPTRELAYQISEQFEAIGGSI-GVRSVVIVGGMDMVTQAVALSKK-PHVLVCTPGRL 175
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E +NL+ L++DEADRLLDM F I I+ +P RRT LFSAT T VE
Sbjct: 176 MDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVE 235
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L PVRV V ++
Sbjct: 236 KLQRASLHQPVRVAVSSK 253
Score = 47 (21.6 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 209 RLAVL-KSL--SLIPLHGKMKQ 227
RLA+L ++L S IPLHG++ Q
Sbjct: 300 RLAILLRTLGFSAIPLHGQLSQ 321
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 281 (104.0 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 73/228 (32%), Positives = 121/228 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGRL
Sbjct: 148 IIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGRL 204
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + + +E+LVLDEADR LDMGFQK ++ II P +R+T LFSATQT V+
Sbjct: 205 LQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQ 264
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT---PLGLHLEYLECEPDEKPSQLV 179
+L++ L++PV V + SAS+++ ++ P L Y+ ++K + L
Sbjct: 265 DLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLW 324
Query: 180 DLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+ + +C Y + +L L+ L+G + Q
Sbjct: 325 SFIKNHLKQKIIVFVASCKQAKYLYEIFCKLR--PGSPLLALYGTLHQ 370
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 251 (93.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 53/135 (39%), Positives = 93/135 (68%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S + +K ++VGG+++ A ++ ++ +++I TPGRL
Sbjct: 133 LVLTPTRELAFQIGEQFEALGSGI-GIKCCVVVGGMDMVAQGLQLAKK-PHIIIATPGRL 190
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E M + + ++ LV+DEADR+L+M F+ ++ I+ LP+ RRT LFSAT T+ V+
Sbjct: 191 VDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVK 250
Query: 123 ELSKAGLRNPVRVEV 137
+L +A L++PV+VEV
Sbjct: 251 KLQRASLKDPVKVEV 265
Score = 47 (21.6 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 162 LHLEYLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPL 221
L YL K LV +L + TC ++L L L+ IPL
Sbjct: 275 LQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG----LAAIPL 330
Query: 222 HGKMKQ 227
HG+M Q
Sbjct: 331 HGQMSQ 336
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 277 (102.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 78/226 (34%), Positives = 120/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ VA+ + ++ +GG +A+ K+ + G NLL+ TPGRL
Sbjct: 165 IIISPTRELALQIFGVAKELLKYHHQTFGIV-IGGANRRAEADKLVK-GVNLLVATPGRL 222
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ FRNL LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 223 LDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKV 282
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ L+ P + V +S + T GL Y+ + D++ L
Sbjct: 283 EDLARISLK-PGPLYVNVDSGK-----------PTSTVEGLEQGYVVVDSDKRFLLLFSF 330
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L + +CA V Y +L + L ++ LHGK KQ
Sbjct: 331 LKRNLKKKVIVFMSSCASVKYMAELLNYI----DLPVLDLHGKQKQ 372
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 278 (102.9 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 76/226 (33%), Positives = 123/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+V+K+ G N+++ TPGRL
Sbjct: 245 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEVQKLLN-GINIIVATPGRL 302
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 303 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVE 362
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + +++A T GL Y+ C +++ L
Sbjct: 363 DLARISLKKEPLYVGVDDD----------KEVA---TVDGLEQGYVVCPSEKRFLLLFTF 409
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HGK KQ
Sbjct: 410 LKKNRKKKVMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQ 451
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 277 (102.6 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 76/226 (33%), Positives = 123/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+V+K+ G N+++ TPGRL
Sbjct: 247 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEVQKLLN-GINIVVATPGRL 304
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 305 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVE 364
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + +++A T GL Y+ C +++ L
Sbjct: 365 DLARISLKKEPLYVGVDDD----------KEVA---TVDGLEQGYVVCPSEKRFLLLFTF 411
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HGK KQ
Sbjct: 412 LKKNRKKKVMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQ 453
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 277 (102.6 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 76/226 (33%), Positives = 123/226 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+V+K+ G N+++ TPGRL
Sbjct: 259 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEVQKLLN-GINIVVATPGRL 316
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 317 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVE 376
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + +++A T GL Y+ C +++ L
Sbjct: 377 DLARISLKKEPLYVGVDDD----------KEVA---TVDGLEQGYVVCPSEKRFLLLFTF 423
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HGK KQ
Sbjct: 424 LKKNRKKKVMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQ 465
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 245 (91.3 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 51/138 (36%), Positives = 91/138 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V S ++VGG++ + + ++ +++I TPGRL
Sbjct: 97 LVLTPTRELAFQISEQFEALGSSI-GVHSAVIVGGIDSMSQSLALAKK-PHIIIATPGRL 154
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 155 VDHLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKQVQ 214
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 215 KLQRAALKNPVKCAVSSK 232
Score = 48 (22.0 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 174 KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
K S LV +L + TC ++L L + IPLHG+M Q
Sbjct: 251 KDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQMSQ 300
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 249 (92.7 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 52/138 (37%), Positives = 92/138 (66%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI S++ VK+ ++VGG+++ + + ++ +++I TPGRL
Sbjct: 151 LVLTPTRELAFQIAEQFDALGSSI-GVKTAVIVGGIDMMSQALVLAKK-PHVVIATPGRL 208
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ME + R L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+ V+
Sbjct: 209 IDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQ 268
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L++PV+ V ++
Sbjct: 269 KLQRAALQDPVKCSVSSK 286
Score = 46 (21.3 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 174 KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
K LV +L + TC ++L L + + IPLHG+M Q
Sbjct: 305 KDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGI----TAIPLHGQMSQ 354
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 274 (101.5 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 76/227 (33%), Positives = 123/227 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI+ VA+ + ++ +GG + + + K+ + G NLL+ TPGRL
Sbjct: 184 IIITPTRELALQIFGVARELMQFHSQTCGIV-IGGADRRQEATKLAK-GVNLLVATPGRL 241
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ + F NL+ LV+DEADR+L++GF+ ++ II LP + R++ LFSATQT V
Sbjct: 242 LDHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQTTKV 300
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ LR P+ + V E VS + GL Y+ C+ D++ L
Sbjct: 301 EDLARISLRPGPLYINVVPEKD---VSTAD----------GLEQGYVVCDSDKRFLLLFS 347
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L + +C V ++ +L + L ++ LHGK KQ
Sbjct: 348 FLKRNVKKKIIVFLSSCNSVKFYSELLNYI----DLPVLDLHGKQKQ 390
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 274 (101.5 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 76/227 (33%), Positives = 123/227 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI+ VA+ + ++ +GG + + + K+ + G NLL+ TPGRL
Sbjct: 184 IIITPTRELALQIFGVARELMQFHSQTCGIV-IGGADRRQEATKLAK-GVNLLVATPGRL 241
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ + F NL+ LV+DEADR+L++GF+ ++ II LP + R++ LFSATQT V
Sbjct: 242 LDHLKNTQFV-FSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSATQTTKV 300
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ LR P+ + V E VS + GL Y+ C+ D++ L
Sbjct: 301 EDLARISLRPGPLYINVVPEKD---VSTAD----------GLEQGYVVCDSDKRFLLLFS 347
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L + +C V ++ +L + L ++ LHGK KQ
Sbjct: 348 FLKRNVKKKIIVFLSSCNSVKFYSELLNYI----DLPVLDLHGKQKQ 390
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 273 (101.2 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 75/226 (33%), Positives = 117/226 (51%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTRELS Q Y V + ++ L++GG A+ K+ + G ++L+ TPGRL
Sbjct: 144 IIVSPTRELSMQTYGVLSELLEG-SNLTYGLVMGGSNRSAEKDKLAK-GVSILVATPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D RN++ L++DEADR+LD+GF+ ++ ++ LPK R++ LFSAT + V+
Sbjct: 202 LDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVD 261
Query: 123 ELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
EL K L NPVRV V H + A T GL Y+ D++ L
Sbjct: 262 ELVKLALHSNPVRVSV-------H------EKAEEATVEGLQQGYIVAPSDKRLLLLFTF 308
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V + +L + + + +HGK KQ
Sbjct: 309 LKKNKTKKVMVFFSSCNSVKFHHELLNYI----DIPCMSIHGKQKQ 350
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 275 (101.9 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 74/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 255 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLGN-GINIIVATPGRL 312
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 313 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 372
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 373 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 419
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HGK KQ
Sbjct: 420 LKKNRKKKLMVFFSSCMSVKYHYELLNYI----DLPVLAIHGKQKQ 461
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 246 (91.7 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 51/138 (36%), Positives = 92/138 (66%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+S ++VGG++ + + ++ +++I TPGRL
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-PHIIIATPGRL 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 154 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 213
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 214 KLQRAALKNPVKCAVSSK 231
Score = 45 (20.9 bits), Expect = 4.9e-23, Sum P(2) = 4.9e-23
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 174 KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
K + LV +L + TC ++L L + IPLHG+M Q
Sbjct: 250 KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQMSQ 299
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 274 (101.5 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 73/226 (32%), Positives = 122/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ Q Y V + ++ L++GG A+ +K+ G N+L+ TPGRL
Sbjct: 237 IVLSPTRELAMQTYGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GVNILVATPGRL 294
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL+ L++DEADR+L++GF++++ II LPK R++ LFSATQT VE
Sbjct: 295 LDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQSMLFSATQTRKVE 354
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V ++K + T GL Y+ C +++ L
Sbjct: 355 DLARISLKKEPLYVGVD-DNKD------------TATVEGLEQGYVVCPSEKRFLLLFTF 401
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V + +L + L ++ +HGK KQ
Sbjct: 402 LKKNRKKKLMVFFSSCMSVKFHYELLNYI----DLPVMAIHGKQKQ 443
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 274 (101.5 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 76/226 (33%), Positives = 121/226 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTRELS Q + V + ++ L++GG + + +K+ + G N+L+ TPGRL
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTYG-LVMGGSNRQVESEKLGK-GINILVATPGRL 320
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ ++NL+ L++DE DR+L++GF++++ II+ LPK R+T LFSATQT +E
Sbjct: 321 LDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIE 380
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
LSK L++ P+ V V H +Q A T GL Y+ C +++ L
Sbjct: 381 ALSKLALKSEPIYVGV-------H---DNQDTA---TVDGLEQGYIVCPSEKRLLVLFTF 427
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y + + L + +HGK KQ
Sbjct: 428 LKKNRKKKVMVFFSSCMSVKYHHELFNYI----DLPVTSIHGKQKQ 469
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 245 (91.3 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 51/138 (36%), Positives = 92/138 (66%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+S ++VGG++ + + ++ +++I TPGRL
Sbjct: 122 LVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-PHIVIATPGRL 179
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 180 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 239
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 240 KLQRAALKNPVKCAVSSK 257
Score = 46 (21.3 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
YL K + LV +L + TC ++L L + IPLHG+M
Sbjct: 268 YLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQM 323
Query: 226 KQ 227
Q
Sbjct: 324 SQ 325
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 274 (101.5 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 78/225 (34%), Positives = 121/225 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY V I + + L++GG +VK ++++I N+LIGTPGR+
Sbjct: 117 LIISPTRELAMQIYEVLTK-IGSHTSFSAGLVIGGKDVKFELERISR--INILIGTPGRI 173
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ L+ NL++LVLDEADR LDMGF+K + I+S L R+T LFSATQ+++V
Sbjct: 174 LQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSATQSQSVA 233
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L + V +H V S +S TP L Y+E +K L +
Sbjct: 234 DLARLSLTDYKTVG------THDVMDGSVNKEAS-TPETLQQFYIEVPLADKLDILFSFI 286
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+ + V + ++ +SL+ LHG+ KQ
Sbjct: 287 KSHLKCKMIVFLSSSKQVHFVYETFRKMQ--PGISLMHLHGRQKQ 329
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 273 (101.2 bits), Expect = 9.5e-23, P = 9.5e-23
Identities = 76/225 (33%), Positives = 116/225 (51%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ Q + I L + L++GG K + +++ N+L+ TPGRL
Sbjct: 115 LVISPTRELAIQTFETLVK-IGRLHSFSAGLIIGGNNYKEEKERLSR--MNILVCTPGRL 171
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ D L++L+LDEADR+LDMGF+ + I+S LP R+T LFSATQT++V+
Sbjct: 172 LQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVK 231
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L+NP + V H SS TP L+ YL EK L +
Sbjct: 232 DLARLSLQNPDFISV------HENDTSS-------TPSNLNQFYLTVPLTEKLDILFGFI 278
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+ +C V + R+ +SL+ LHGK KQ
Sbjct: 279 RTHLKFKTIVFLSSCKQVRFVYETFRRMR--PGISLLHLHGKQKQ 321
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 272 (100.8 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 252 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GINIVVATPGRL 309
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 310 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 369
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 370 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 416
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 417 LKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 458
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 255 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GINIVVATPGRL 312
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 313 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 372
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 373 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 419
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 420 LKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 461
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GINIVVATPGRL 313
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 314 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 373
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 374 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 420
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 421 LKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 462
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 259 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GINIVVATPGRL 316
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 317 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 376
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 377 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 423
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 424 LKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 465
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 73/226 (32%), Positives = 119/226 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + ++ L++GG A+ +K+ G N+++ TPGRL
Sbjct: 281 LILSPTRELAMQTFGVLKELMTHHVHTYG-LIMGGSNRSAEAQKLAN-GINIVVATPGRL 338
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT VE
Sbjct: 339 LDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVE 398
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 399 DLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFTF 445
Query: 182 LXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 446 LKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 487
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 271 (100.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 74/227 (32%), Positives = 121/227 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSV-LLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ Q + V + + + V + L++GG A+ +K+ G N+++ TPGR
Sbjct: 254 LILSPTRELAMQTFGVLKELM--MYHVHTYGLIMGGSNRSAEAQKLGN-GINIIVATPGR 310
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ ++NL+ LV+DEADR+LD+GF++++ II LP R+T LFSATQT V
Sbjct: 311 LLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKV 370
Query: 122 EELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ L+ P+ V V + + V GL Y+ C +++ L
Sbjct: 371 EDLARISLKKEPLYVGVDDDKANATVD-------------GLEQGYVVCPSEKRFLLLFT 417
Query: 181 LLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +F +C V Y +L + L ++ +HG+ KQ
Sbjct: 418 FLKKNRKKKLMVFFSSCKSVKYHYELLNYI----DLPVLAIHGRQKQ 460
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 240 (89.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 50/138 (36%), Positives = 91/138 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+ ++VGG++ + + ++ +++I TPGRL
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSI-GVQCAVIVGGIDSMSQSLALAKK-PHIVIATPGRL 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 154 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 213
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 214 KLQRAALKNPVKCAVSSK 231
Score = 46 (21.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
YL K + LV +L + TC ++L L + IPLHG+M
Sbjct: 242 YLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQM 297
Query: 226 KQ 227
Q
Sbjct: 298 SQ 299
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 240 (89.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 50/138 (36%), Positives = 91/138 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+ ++VGG++ + + ++ +++I TPGRL
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSI-GVQCAVIVGGIDSMSQSLALAKK-PHIVIATPGRL 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 154 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 213
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 214 KLQRAALKNPVKCAVSSK 231
Score = 46 (21.3 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
YL K + LV +L + TC ++L L + IPLHG+M
Sbjct: 242 YLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQM 297
Query: 226 KQ 227
Q
Sbjct: 298 SQ 299
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 240 (89.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 50/138 (36%), Positives = 91/138 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+ ++VGG++ + + ++ +++I TPGRL
Sbjct: 95 LVLTPTRELAFQISEQFEALGSSI-GVQCAVIVGGIDSMSQSLALAKK-PHIVIATPGRL 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 153 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 212
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 213 KLQRAALKNPVKCAVSSK 230
Score = 46 (21.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
YL K + LV +L + TC ++L L + IPLHG+M
Sbjct: 241 YLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQM 296
Query: 226 KQ 227
Q
Sbjct: 297 SQ 298
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 240 (89.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 50/138 (36%), Positives = 91/138 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + S++ V+ ++VGG++ + + ++ +++I TPGRL
Sbjct: 98 LVLTPTRELAFQISEQFEALGSSI-GVQCAVIVGGIDSMSQSLALAKK-PHIVIATPGRL 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+ V+
Sbjct: 156 IDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQ 215
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A L+NPV+ V ++
Sbjct: 216 KLQRAALKNPVKCAVSSK 233
Score = 46 (21.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
YL K + LV +L + TC ++L L + IPLHG+M
Sbjct: 244 YLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG----FTAIPLHGQM 299
Query: 226 KQ 227
Q
Sbjct: 300 SQ 301
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 249 (92.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 54/149 (36%), Positives = 93/149 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + ++K + L GG+ + + +E GA++L+GTPGR+
Sbjct: 76 LVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEH-GAHILVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + D +D L LVLDEADR+L+MGFQ+ + II+ P R+T LFSAT ++E
Sbjct: 135 LDHLSK-DRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLFSATYPASIE 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+++++ RN + ++V A +H S+ Q
Sbjct: 194 QIAQSVTRNALMIKVEA---THDTSSIRQ 219
Score = 36 (17.7 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 217 SLIPLHGKMKQ 227
S+I LHG M+Q
Sbjct: 269 SVIELHGDMEQ 279
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 266 (98.7 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 53/135 (39%), Positives = 91/135 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVGESVETYGKYLP-LRSAVVFGGVPINPQINKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++++ + + F LEILVLDEADR+LDMGF + I I++ LP R+ +FSAT ++ +
Sbjct: 135 LDLVQQ-NAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + +PV + V
Sbjct: 194 ELAKGLVNHPVEISV 208
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 263 (97.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 58/135 (42%), Positives = 91/135 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 263 (97.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 58/135 (42%), Positives = 91/135 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 247 (92.0 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 57/164 (34%), Positives = 95/164 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI S++ ++S +VGG+++ + + + ++++ TPGR+
Sbjct: 195 LVLAPTRELTFQIKDTFDALGSSM-GLRSSCIVGGMDMMDQARDLMRK-PHVIVATPGRI 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E +NL+ LV+DEADRLLDM F + I+ +P R T LFSAT T +E
Sbjct: 253 MDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIE 312
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHL 164
+L +A L NPVRV V ++ ++ S L + K + +HL
Sbjct: 313 KLQRASLHNPVRVAVSSKYQTADNLVQSMMLVNDGYKNTILIHL 356
Score = 41 (19.5 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 210 LAVLKSLSLIPLHGKMKQ 227
LA + + +PLHG++ Q
Sbjct: 381 LARILGFNAVPLHGQLSQ 398
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 267 (99.0 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 56/135 (41%), Positives = 88/135 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I PTREL+ Q Y VA+ + + +GG + K + + I +G NLL+ TPGRL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKYHSQTVGKV-IGGEKRKTEAE-ILAKGVNLLVATPGRL 287
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + F+NL+ LV+DEADR+L+ F++ + I++ LPK R+T LFSATQ+ VE
Sbjct: 288 LDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVE 347
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L +PV ++V
Sbjct: 348 DLARVSLTSPVYIDV 362
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 268 (99.4 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 61/165 (36%), Positives = 101/165 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ Q + V + I + L++GG V+ + + + N+LIGTPGR+
Sbjct: 125 LVLSPTRELAVQTFQVLRK-IGRHHLFSAGLVIGGKSVREEAEALSR--MNILIGTPGRI 181
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ D NL++LVLDEADR++D+GFQ+ + ++ LP R+T LFSATQ++ V
Sbjct: 182 LQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTRQTLLFSATQSKKVS 241
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYL 167
+L++ L++P V V AE+ + + S+ Q TPL L+ L
Sbjct: 242 DLARLSLKDPEYVSVHAEATT--ATPSTLQQHYIVTPLPEKLDTL 284
Score = 217 (81.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/176 (31%), Positives = 91/176 (51%)
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
N+LIGTPGR+ +++ D NL++LVLDEADR++D+GFQ+ + ++ LP R+T L
Sbjct: 172 NILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTRQTLL 231
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPD 172
FSATQ++ V +L++ L++P V V AE A++ TP L Y+
Sbjct: 232 FSATQSKKVSDLARLSLKDPEYVSVHAE-------------ATTATPSTLQQHYIVTPLP 278
Query: 173 EKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
EK L + + + V + V + + L+ +HG+ KQ+
Sbjct: 279 EKLDTLWGFIKANLKSKMVVFLSSGKQVRF--VYESFRQMQPGIPLLHMHGRQKQL 332
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 258 (95.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 59/141 (41%), Positives = 87/141 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q+ + L D+ S+ + GGV+ + +++ G ++L+ TPGRL
Sbjct: 82 LILVPTRELAVQVEASISQYAKYL-DISSMAMYGGVDAQEQKQRLIW-GVDILVATPGRL 139
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M VL F L++LVLDEADR+LDMGF I+ II RLP+ R+ LFSAT +E V
Sbjct: 140 LD-MTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNLLFSATMSEEVR 198
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L+K + PV + + A+ S
Sbjct: 199 GLAKRTIHKPVEISIGADKAS 219
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 240 (89.5 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 53/143 (37%), Positives = 94/143 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+SQI V + + +V + + GG +K D+KK+++ G + GTPGR+
Sbjct: 95 LILSPTRELASQIGQVVKN-LGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLD--MGFQKQISYIISRLPKLRRTGLFSATQTEA 120
D++++ +L RN+++LVLDEAD LL +GF++QI I ++LPK + + SAT +
Sbjct: 154 LDMIKKQ-MLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKD 212
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
+ E+++ + +PV++ V+ + S
Sbjct: 213 ILEVTRKFMNDPVKILVKRDEIS 235
Score = 37 (18.1 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 207 LPRLAVLKSLSLIPLHGKMKQ 227
L + + + +++ +HG MKQ
Sbjct: 281 LSQRLIQSNFAVVSMHGDMKQ 301
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 266 (98.7 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 65/165 (39%), Positives = 98/165 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+
Sbjct: 124 LIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGRM 180
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ + NL++LVLDEADR++DMGFQK + II LP R+T LFSATQT+ V
Sbjct: 181 LQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFSATQTKKVS 240
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYL 167
+L++ L++P V V + S S Q TPL L+ L
Sbjct: 241 DLARLSLQDPEYVAVHEAASSATPSKLQQHYVV--TPLPQKLDTL 283
Score = 210 (79.0 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 60/177 (33%), Positives = 90/177 (50%)
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
N+L+ TPGR+ +++ + NL++LVLDEADR++DMGFQK + II LP R+T L
Sbjct: 171 NILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLL 230
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPD 172
FSATQT+ V +L++ L++P V V H + ASS TP L Y+
Sbjct: 231 FSATQTKKVSDLARLSLQDPEYVAV-------H------EAASSATPSKLQQHYVVTPLP 277
Query: 173 EKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVG 229
+K L + + + V + V + + L+ LHG+ KQ G
Sbjct: 278 QKLDTLWSFIRSNLKSKTIVFMSSGKQVRF--VYESFRHMQPGIPLLHLHGRQKQGG 332
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 262 (97.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 61/139 (43%), Positives = 88/139 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL++Q + V + + LL+GG E DV+K N+L+ PGRL
Sbjct: 147 IIISPTRELAAQTFGVLNK-VGKFHKFSAGLLIGGRE-GVDVEKERVHEMNILVCAPGRL 204
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + L+IL+LDEADR+LD F+ Q+ IIS+LPK R+T LFSATQT+ V+
Sbjct: 205 LQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVK 264
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L++ LR+P + V AE+
Sbjct: 265 DLARLSLRDPEYISVHAEA 283
Score = 224 (83.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 68/195 (34%), Positives = 98/195 (50%)
Query: 33 LLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMG 92
LL+GG E DV+K N+L+ PGRL M+ + L+IL+LDEADR+LD
Sbjct: 176 LLIGGRE-GVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSA 234
Query: 93 FQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
F+ Q+ IIS+LPK R+T LFSATQT+ V++L++ LR+P + V AE+ V+A
Sbjct: 235 FKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEA----VTA---- 286
Query: 153 LASSKTPLGLHLEYLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAV 212
TP L + ++K L + + T V + +L
Sbjct: 287 -----TPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLR- 340
Query: 213 LKSLSLIPLHGKMKQ 227
+ L LHGKM Q
Sbjct: 341 -PGIPLKSLHGKMSQ 354
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 258 (95.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 53/135 (39%), Positives = 90/135 (66%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I PTREL+ Q +VA+ + S +++GG +++ ++I G+NL+I TPGRL
Sbjct: 165 IVICPTRELAIQTKNVAEELLKHHSQTVS-MVIGGNNRRSEAQRIAS-GSNLVIATPGRL 222
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ +++L+ LV+DEADR+L+ F++ ++ I+ LPK R+T LFSATQT V+
Sbjct: 223 LDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQTALFSATQTSKVK 282
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L +PV V+V
Sbjct: 283 DLARVSLTSPVHVDV 297
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 254 (94.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 56/146 (38%), Positives = 95/146 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + + L +++S+++ GGV + + K+ G ++L+ TPGRL
Sbjct: 79 LILTPTRELAAQIGENVRDYSKYL-NIRSLVVFGGVSINPQMMKLRG-GVDVLVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ E + + +EILVLDEADR+LDMGF I ++++LP R+ LFSAT ++ ++
Sbjct: 137 LDL-EHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIK 195
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVS 147
L++ L NP+ +EV R + S V+
Sbjct: 196 ALAEKLLHNPLEIEVARRNTASDQVT 221
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 254 (94.5 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 53/141 (37%), Positives = 92/141 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + + L ++ S+++ GGV++ + ++ + G ++L+ TPGRL
Sbjct: 84 LILTPTRELAAQISESIEVYGKYL-NLHSMVVFGGVKINPQIARLRQ-GVDVLVATPGRL 141
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LE+ +LDEADR+LDMGF + I +++ LPK R+ LFSAT + +
Sbjct: 142 LDLYNQRAV-KFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQNLLFSATFSPEIR 200
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L+K + NP+ + V AE+ +
Sbjct: 201 ALAKGMVNNPLEISVDAENST 221
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 251 (93.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 53/135 (39%), Positives = 87/135 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q++ + + LP +K+ ++ GGV +K + + G ++L+ TPGRL
Sbjct: 90 LILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQINHLRR-GVDILVATPGRL 147
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + VL+ +E VLDEADR+LDMGF I I+ LP+ R+ LFSAT ++ ++
Sbjct: 148 LDLVNQ-GVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATFSKEIK 206
Query: 123 ELSKAGLRNPVRVEV 137
EL+ L +P +EV
Sbjct: 207 ELTDKLLHSPALIEV 221
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 251 (93.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 53/135 (39%), Positives = 87/135 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q++ + + LP +K+ ++ GGV +K + + G ++L+ TPGRL
Sbjct: 90 LILTPTRELAVQVFECVRAYGKYLP-LKATVVHGGVSIKPQINHLRR-GVDILVATPGRL 147
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + VL+ +E VLDEADR+LDMGF I I+ LP+ R+ LFSAT ++ ++
Sbjct: 148 LDLVNQ-GVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATFSKEIK 206
Query: 123 ELSKAGLRNPVRVEV 137
EL+ L +P +EV
Sbjct: 207 ELTDKLLHSPALIEV 221
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 250 (93.1 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 55/141 (39%), Positives = 88/141 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ H + DV + GGV K + +++ G ++LI TPGRL
Sbjct: 80 LVLTPTRELAQQV-HKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV-GVDILIATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ R + + N+E LV DEADR+LDMGF+++I I LPK ++T LFSAT + +
Sbjct: 138 LDLL-RTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSATFADDIY 196
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
++SK L P VE+ ++K+
Sbjct: 197 KMSKNILVEPKMVEIDEKNKA 217
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 250 (93.1 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 55/141 (39%), Positives = 88/141 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ H + DV + GGV K + +++ G ++LI TPGRL
Sbjct: 80 LVLTPTRELAQQV-HKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV-GVDILIATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ R + + N+E LV DEADR+LDMGF+++I I LPK ++T LFSAT + +
Sbjct: 138 LDLL-RTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSATFADDIY 196
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
++SK L P VE+ ++K+
Sbjct: 197 KMSKNILVEPKMVEIDEKNKA 217
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 223 (83.6 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 51/141 (36%), Positives = 86/141 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI +V + + ++ + +GG V DVKK+++ G ++ GTPGR+
Sbjct: 98 LILSPTRELAIQIQNVVK-HLGDYMNIHTHACIGGKNVGEDVKKLQQ-GQQIVSGTPGRV 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R + L RN+++L+LDEAD L GF++QI I LP + + SAT V
Sbjct: 156 IDVIKRRN-LQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPREVL 214
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
E++ +PV++ V+ + S
Sbjct: 215 EMTSKFTTDPVKILVKRDEIS 235
Score = 46 (21.3 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 161 GLHLEYLECEPDE-KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLI 219
G+ Y++CE ++ K L DL + T V++ + + ++ +++
Sbjct: 238 GIKQYYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKK----QNFTVV 293
Query: 220 PLHGKMKQ 227
+HG MKQ
Sbjct: 294 AMHGDMKQ 301
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 256 (95.2 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 58/141 (41%), Positives = 87/141 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q + VA S D+K L VGG+ +K ++ +++I TPGR
Sbjct: 330 VILAPTRELAIQCHAVATKLASHT-DIKFCLAVGGLSLKVQESELRLR-PDVIIATPGRF 387
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M +EILVLDEADR+L+ GF +++ I++ LPK R+T LFSAT T +V+
Sbjct: 388 IDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVD 447
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L + GL PVR+ V ++ K+
Sbjct: 448 NLIRVGLNKPVRLMVDSQKKT 468
Score = 191 (72.3 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 61/179 (34%), Positives = 87/179 (48%)
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
+++I TPGR D M +EILVLDEADR+L+ GF +++ I++ LPK R+T L
Sbjct: 378 DVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTML 437
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEP- 171
FSAT T +V+ L + GL PVR+ V SQ+ KT + L E++ P
Sbjct: 438 FSATMTSSVDNLIRVGLNKPVRLMV-----------DSQK----KTVVTLTQEFVRLRPG 482
Query: 172 -DEKP-SQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+EK LV L +F + ++ L LS LHG M Q+
Sbjct: 483 REEKRMGYLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLG----LSCAELHGSMSQI 537
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 256 (95.2 bits), Expect = 7.7e-21, P = 7.7e-21
Identities = 56/134 (41%), Positives = 87/134 (64%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I+ PTREL+ Q Y+VA ++T D+ LVGG ++ + + + ++ +++I TPGR
Sbjct: 374 ILMPTRELAVQCYNVATK-LATYTDITFCQLVGGFSLR-EQENVLKKRPDVIIATPGRFI 431
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D M LEILVLDEADR+L+ GF +++ I++ +PK R+T LFSAT T++V++
Sbjct: 432 DHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMTDSVDK 491
Query: 124 LSKAGLRNPVRVEV 137
L + GL PVR+ V
Sbjct: 492 LIRVGLNRPVRLMV 505
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 249 (92.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 66/179 (36%), Positives = 103/179 (57%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDV--KSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++SPTREL+ QI A+ F + D+ + +LVGG++ + + ++++ TPGR
Sbjct: 94 VLSPTRELAIQI---AEQFEALGADISLRCAVLVGGIDRMQQTIALGKR-PHVIVATPGR 149
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L+D M ++L+ LVLDEADRLL+ F+K ++ I+ +P R+T LFSAT T+ V
Sbjct: 150 LWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFSATMTKKV 209
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQ--LASSKTPLGLHLEYLECEPDEKPSQL 178
+L +A LRNPV++E A SK V QQ ++K +L Y+ E E S +
Sbjct: 210 RKLQRACLRNPVKIE--AASKYSTVDTLKQQYRFVAAKYK-DCYLVYILSEMPESTSMI 265
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 256 (95.2 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 55/135 (40%), Positives = 89/135 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI A F + L GG +K++E GA++++ TPGRL
Sbjct: 511 LILAPTRELATQIQDEALRF-GRSSRISCTCLYGGAPKGPQLKELER-GADIVVATPGRL 568
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+E M ++DF+ + +LVLDEADR+LDMGF+ QI I++ +P R+T +++AT + V
Sbjct: 569 NDILE-MKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVR 627
Query: 123 ELSKAGLRNPVRVEV 137
+++ L NPV+V +
Sbjct: 628 KIASDLLVNPVQVNI 642
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 251 (93.4 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 54/133 (40%), Positives = 90/133 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI + A+ +S LP +K+VLLVGG+ + + ++ + ++I TPGRL
Sbjct: 276 LILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQH-VKVIIATPGRL 334
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+++ V + ++I+V+DEAD +L MGFQ+Q+ I+ +P +T L SAT ++E
Sbjct: 335 LDIIKQSSV-ELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIE 393
Query: 123 ELSKAGLRNPVRV 135
+L+ L NPVR+
Sbjct: 394 QLASQLLHNPVRI 406
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 251 (93.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 54/133 (40%), Positives = 90/133 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI + A+ +S LP +K+VLLVGG+ + + ++ + ++I TPGRL
Sbjct: 276 LILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQH-VKVIIATPGRL 334
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+++ V + ++I+V+DEAD +L MGFQ+Q+ I+ +P +T L SAT ++E
Sbjct: 335 LDIIKQSSV-ELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIE 393
Query: 123 ELSKAGLRNPVRV 135
+L+ L NPVR+
Sbjct: 394 QLASQLLHNPVRI 406
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 250 (93.1 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 54/133 (40%), Positives = 90/133 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI A+ +S LP +K+VLLVGG+ + + ++++ ++I TPGRL
Sbjct: 275 LILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH-VKVIIATPGRL 333
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+++ V + ++I+V+DEAD +L MGFQ+Q+ I+ +P +T L SAT ++E
Sbjct: 334 LDIIKQSSV-ELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIE 392
Query: 123 ELSKAGLRNPVRV 135
+L+ L NPVR+
Sbjct: 393 QLASQLLHNPVRI 405
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 252 (93.8 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 54/135 (40%), Positives = 84/135 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q + VA I++ D+ L +GG+ +K +++ + +++I TPGR
Sbjct: 334 LILCPTRELAMQCHSVATK-IASFTDIMVCLCIGGLSLKLQEQELRKR-PDIVIATPGRF 391
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M N+EI+V+DEADR+L+ GF +++ II PK R+T LFSAT T+ V+
Sbjct: 392 IDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQTMLFSATMTDKVD 451
Query: 123 ELSKAGLRNPVRVEV 137
+L + L PVRV V
Sbjct: 452 DLIRLSLNRPVRVFV 466
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 252 (93.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 57/137 (41%), Positives = 88/137 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q V + ++ ++ S L+VGG+ KA ++ + +++I TPGRL
Sbjct: 265 LILLPTRELALQCQSVMEN-LAQFSNITSCLIVGGLSNKAQEVELRKS-PDVVIATPGRL 322
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +LEIL+LDEADRLLDMGF+ +I+ I+ P R+T LFSAT + V+
Sbjct: 323 IDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVK 382
Query: 123 ELSKAGLRNPVRVEVRA 139
L+K L+ P+RV+V A
Sbjct: 383 TLAKLSLQQPIRVQVDA 399
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 250 (93.1 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 54/133 (40%), Positives = 90/133 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI A+ +S LP +K+VLLVGG+ + + ++++ ++I TPGRL
Sbjct: 275 LILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQH-VKVIIATPGRL 333
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+++ V + ++I+V+DEAD +L MGFQ+Q+ I+ +P +T L SAT ++E
Sbjct: 334 LDIIKQSSV-ELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIE 392
Query: 123 ELSKAGLRNPVRV 135
+L+ L NPVR+
Sbjct: 393 QLASQLLHNPVRI 405
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 252 (93.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 63/180 (35%), Positives = 102/180 (56%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q Y + + ++KS+L++GG + + I ++++ TPGR
Sbjct: 113 LILSPTRELAVQTYKFIKE-LGRFMELKSILVLGGDSMDSQFSAIHT-CPDVIVATPGRF 170
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ MD L ++E +V DEADRL +MGF +Q++ + RLP R+T +FSAT + +
Sbjct: 171 LHLCVEMD-LKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLV 229
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
E ++AGL +PV + + ESK P L L++L C PD++ + LV LL
Sbjct: 230 EFARAGLNDPVLIRLDVESK---------------LPDALALKFLYCRPDDRYTALVVLL 274
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 253 (94.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 54/143 (37%), Positives = 89/143 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I++PTREL+ QI+ +PF+ TL +++V GG +K + ++ GA +++ T G
Sbjct: 453 IGLILTPTRELAVQIFRDCKPFLKTL-GLRAVCAYGGPPIKDQIADLKR-GAEIVVATTG 510
Query: 61 RLYDIMERMD--VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
R+ D++ V+ R +VLDEADR+ DMGF+ Q+ I + + R+T LFSAT
Sbjct: 511 RMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFSATMP 570
Query: 119 EAVEELSKAGLRNPVRVEVRAES 141
+ ++ L K L+NPV +EV +S
Sbjct: 571 KIMDALVKKVLKNPVEIEVGGKS 593
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 229 (85.7 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 53/138 (38%), Positives = 80/138 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I PTREL+ Q+ + ++K + L GGV + +E GA++++GTPGR+
Sbjct: 78 LVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEH-GAHIIVGTPGRI 136
Query: 63 YDIMERMD-VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + VLD L LVLDEADR+LDMGF I II + P R+T LFSAT +
Sbjct: 137 QQHLRKGSLVLD--GLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFSATYPVGI 194
Query: 122 EELSKAGLRNPVRVEVRA 139
++L+ +R+P V+ A
Sbjct: 195 KQLASKFMRDPQTVKAEA 212
Score = 38 (18.4 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 166 YLECEPDEKPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
+ E P+E+ S + +L + T V + L K +S + LHG +
Sbjct: 223 FYEISPEERMSAVTKVLHHFRPASCVAFCFTKQQVQE---TVDHLTA-KGISAVGLHGDL 278
Query: 226 KQ 227
+Q
Sbjct: 279 EQ 280
>UNIPROTKB|Q2KEF1 [details] [associations]
symbol:MGCH7_ch7g1085 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
GO:GO:0008026 ProteinModelPortal:Q2KEF1 Uniprot:Q2KEF1
Length = 568
Score = 248 (92.4 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 77/234 (32%), Positives = 116/234 (49%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QI A+ + LP K +GG A+ ++I G +LIGTPGRL
Sbjct: 154 LVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRILR-GCQILIGTPGRL 212
Query: 63 YDIMERMDVLDF-RNLEILVLDEADRLLDMGFQKQISYIISRLP---KLRRTG-LFSATQ 117
D +E V + ++++ VLDEADRLLDMGF Q+ I++ LP K+ R G LFSAT
Sbjct: 213 MDHLEEQSVAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALPNRQKVPRQGMLFSATV 272
Query: 118 TEAVEELSKAGLRNPVR-VEV--RAESKSHH-VSASSQQLASSKTPLGLHLEYLECEPDE 173
E V ++S L + + + ES +H V ++ + + + L E E
Sbjct: 273 AEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFSDTMAALVGALRHELAE 332
Query: 174 KPSQLVDLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+Q + T A VD++ VL L + + + LH +M Q
Sbjct: 333 SANQ--------DEFKAIVFAPTAALVDFYAAVLEGLPNMPRI--LTLHSRMTQ 376
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 245 (91.3 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 55/136 (40%), Positives = 88/136 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI + + L +++ V++ GG ++ ++++E GA++L+ TPGRL
Sbjct: 84 LVLAPTRELAGQIATSFGTYGAGL-NLRVVMVCGGAKIGGQIRQLER-GAHILVATPGRL 141
Query: 63 YDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
D+ME+ V LD +E L+LDEAD++LD+GF + I +P R+T FSAT +AV
Sbjct: 142 IDLMEQRAVSLD--KVETLILDEADQMLDLGFIHALRAIAKNVPSKRQTLFFSATMPKAV 199
Query: 122 EELSKAGLRNPVRVEV 137
E L+ LRNP V V
Sbjct: 200 ESLAATFLRNPAEVSV 215
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 250 (93.1 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 53/133 (39%), Positives = 86/133 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI+ + Q ++ D+K L+VGG+ V+ + + + ++++ TPGR+
Sbjct: 242 LILTPTRELAVQIHSMIQN-LAQFTDIKCGLIVGGLSVR-EQEVVLRSMPDIVVATPGRM 299
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + +D +L +L+LDEADRLL GF +I+ ++ PK R+T LFSAT TE V+
Sbjct: 300 IDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVK 359
Query: 123 ELSKAGLRNPVRV 135
EL K L P+R+
Sbjct: 360 ELVKLSLNKPLRL 372
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 244 (91.0 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 61/173 (35%), Positives = 100/173 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI++ A+P +++ +K+ L GG + K++ G ++LIGT GR+
Sbjct: 88 IIMAPTRELAIQIFNDAEPLLAST-GLKAALAYGGESYDKQLAKLQS-GVDILIGTTGRI 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP--KLRRTGLFSATQTEA 120
D ++ V + +++ +VLDEADR+ D+GF K I ++ R+P K R LFSAT +
Sbjct: 146 IDFYKQR-VFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYR 204
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECE-PD 172
V+EL+ + NP V V E K+ H S++ + L +E E PD
Sbjct: 205 VQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPD 257
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 244 (91.0 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 61/173 (35%), Positives = 100/173 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI++ A+P +++ +K+ L GG + K++ G ++LIGT GR+
Sbjct: 88 IIMAPTRELAIQIFNDAEPLLAST-GLKAALAYGGESYDKQLAKLQS-GVDILIGTTGRI 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP--KLRRTGLFSATQTEA 120
D ++ V + +++ +VLDEADR+ D+GF K I ++ R+P K R LFSAT +
Sbjct: 146 IDFYKQR-VFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYR 204
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECE-PD 172
V+EL+ + NP V V E K+ H S++ + L +E E PD
Sbjct: 205 VQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPD 257
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 249 (92.7 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 74/225 (32%), Positives = 112/225 (49%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + + L++GG +V + +I G N+++ TPGRL
Sbjct: 152 LIISPTRELALQTFSTINA-VGAHHGFSCGLVIGGSDVAFERNRIS--GINIIVCTPGRL 208
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + +L++LVLDEADR+LDMGF KQ++ II+ LP R+T LFSATQT V+
Sbjct: 209 LQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVK 268
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L + +PV V V H +AS+ TP L Y+ E + K + L +
Sbjct: 269 DLCRVCTNDPVFVSV-------HENASAA------TPDNLKQSYVIVEEEHKINALWSFI 315
Query: 183 XXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+ +C + +L L ++ L G M Q
Sbjct: 316 EAHRKKKSLVFVSSCKQARFLTEAFSQLR--PGLPVMGLWGTMNQ 358
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 249 (92.7 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 53/139 (38%), Positives = 85/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ V + L VGG++VK + G ++LI TPGRL
Sbjct: 255 LVLVPTRELGIQVHSVTKQ-LAQFSSVTTCLAVGGLDVKTQEAALRS-GPDILIATPGRL 312
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II + R+T LFSAT TE V+
Sbjct: 313 IDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVK 372
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NP R+ V + +
Sbjct: 373 DLASVSLKNPTRIFVNSNT 391
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 249 (92.7 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 53/139 (38%), Positives = 85/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ V + L VGG++VK + G ++LI TPGRL
Sbjct: 256 LVLVPTRELGIQVHSVTKQ-LAQFSSVTTCLAVGGLDVKTQEAALRS-GPDILIATPGRL 313
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II + R+T LFSAT TE V+
Sbjct: 314 IDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTEEVK 373
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NP R+ V + +
Sbjct: 374 DLASVSLKNPTRIFVNSNT 392
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 250 (93.1 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 62/156 (39%), Positives = 99/156 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SP+REL+ Q ++V + F +++SVLL GG ++ + +++I TPGR
Sbjct: 211 VILSPSRELAMQTFNVFKDFARGT-ELRSVLLTGGDSLEEQFGMMMTN-PDVIIATPGRF 268
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M+ LD +++E +V DEADRL +MGFQ+Q++ +++ LP R+T LFSAT ++
Sbjct: 269 LHLKVEMN-LDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTRQTLLFSATLPNSLV 327
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQL-ASSK 157
+ KAGL NPV V + AE+K VS + + L SSK
Sbjct: 328 DFVKAGLVNPVLVRLDAETK---VSENLEMLFLSSK 360
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 243 (90.6 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 53/135 (39%), Positives = 86/135 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q+ + LP + ++ + GGV+ K++ E G +LL+ TPGRL
Sbjct: 77 IILTPTRELALQVEQNINQYAKYLP-LTAMAMYGGVDAAPQKKRLIE-GVDLLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M + F + +LVLDEADR+LDMGF + I+ II +LP+ R+ LFSAT ++ V+
Sbjct: 135 LD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVK 193
Query: 123 ELSKAGLRNPVRVEV 137
L+K + + + +E+
Sbjct: 194 ALAKTAIPDAIEIEI 208
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 243 (90.6 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 53/135 (39%), Positives = 86/135 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q+ + LP + ++ + GGV+ K++ E G +LL+ TPGRL
Sbjct: 77 IILTPTRELALQVEQNINQYAKYLP-LTAMAMYGGVDAAPQKKRLIE-GVDLLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M + F + +LVLDEADR+LDMGF + I+ II +LP+ R+ LFSAT ++ V+
Sbjct: 135 LD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVK 193
Query: 123 ELSKAGLRNPVRVEV 137
L+K + + + +E+
Sbjct: 194 ALAKTAIPDAIEIEI 208
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 248 (92.4 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/174 (35%), Positives = 100/174 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q + + +++ L++GG + + E +++IGTPGRL
Sbjct: 152 LILTPTRELALQTMKFTKE-LGKFTGLRTALILGGDSMDDQFAALHEN-PDIIIGTPGRL 209
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ M+ L +++E +V DEADRL +MGF +Q+ II RLP R+T LFSAT + +
Sbjct: 210 MHVIQEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQTLLFSATLPKLIV 268
Query: 123 ELSKAGLRNPVRVEVRAESK-SHHVSASSQQLASSKTP-LGLHLEYLECEPDEK 174
E ++AGL PV + + ++K S + S L P L LHL +P E+
Sbjct: 269 EFARAGLTEPVLIRLDVDTKLSEQLKLSFFSLRLDDKPALLLHLLRNVVKPQEQ 322
Score = 207 (77.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 51/133 (38%), Positives = 79/133 (59%)
Query: 50 EGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRR 109
E +++IGTPGRL +++ M+ L +++E +V DEADRL +MGF +Q+ II RLP R+
Sbjct: 197 ENPDIIIGTPGRLMHVIQEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQ 255
Query: 110 TGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLEC 169
T LFSAT + + E ++AGL PV + + ++K S+QL L +
Sbjct: 256 TLLFSATLPKLIVEFARAGLTEPVLIRLDVDTKL------SEQLK---------LSFFSL 300
Query: 170 EPDEKPSQLVDLL 182
D+KP+ L+ LL
Sbjct: 301 RLDDKPALLLHLL 313
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 246 (91.7 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 60/185 (32%), Positives = 109/185 (58%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTL------PDVKSVLLVGGVEVKADVKKIEEEGANLL 55
G+I+ P+REL+ Q Y + F + L P ++++L +GG++++ + + I ++G +++
Sbjct: 301 GLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLR-EQEHIFKKGVHMI 359
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
I TPGRL D++ + + +F+ + L LDEADRL+D+GF+ I ++ R+T LFSA
Sbjct: 360 IATPGRLLDLLNKKKI-NFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFTNQRQTLLFSA 418
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEK 174
T + ++E +++ L PV V V RA + + +V+ Q++ K P + LEC
Sbjct: 419 TMPKKIQEFARSALVLPVEVNVGRAGAANLNVT---QEVEFVK-PEAKIVYLLECLQKTP 474
Query: 175 PSQLV 179
P L+
Sbjct: 475 PPVLI 479
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 242 (90.2 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 56/135 (41%), Positives = 80/135 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++K + + GGV + +E GA+++IGTPGRL
Sbjct: 76 LVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEH-GAHVVIGTPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR+LDMGFQ IS +I+ P R+T LFSAT +++
Sbjct: 135 LDHLRRGS-LDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFSATYPDSIA 193
Query: 123 ELSKAGLRNPVRVEV 137
+S R PV V V
Sbjct: 194 AMSAGVQREPVEVSV 208
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 245 (91.3 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 52/133 (39%), Positives = 87/133 (65%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI A+ + LP +++ LLVGG+ + ++ + ++I TPGRL
Sbjct: 263 LVLTPTRELAIQIERQAKELMGGLPRMRTALLVGGLPAPPQLHRLRQR-VQVIIATPGRL 321
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DIM++ V D N++I+V+DEAD +L MGFQ+Q+ ++ +P+ +T L SAT +E
Sbjct: 322 LDIMKQSSV-DLGNIKIVVVDEADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIE 380
Query: 123 ELSKAGLRNPVRV 135
+L+ L +PVRV
Sbjct: 381 QLASRLLHDPVRV 393
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 243 (90.6 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 57/133 (42%), Positives = 84/133 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI A F S+ +K+ + GGV V+ +++ G ++I TPGRL
Sbjct: 176 LVLAPTRELAVQIQQEASKFGSS-SKIKTTCIYGGVPKGPQVRDLQK-GVEIVIATPGRL 233
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ME + + R + LVLDEADR+LDMGF QI I+S + R+T +SAT + VE
Sbjct: 234 IDMMESNNT-NLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVE 292
Query: 123 ELSKAGLRNPVRV 135
+LSK L NP +V
Sbjct: 293 QLSKKFLYNPYKV 305
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 245 (91.3 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 53/133 (39%), Positives = 88/133 (66%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI A+ +S LP +K+VLLVGG+ + + ++ + ++I TPGRL
Sbjct: 275 LILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQH-VKVIIATPGRL 333
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+++ V ++I+V+DEAD +L MGFQ+Q+ ++ P +T L SAT +++E
Sbjct: 334 LDIIKQSSV-SLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTILVSATIPDSIE 392
Query: 123 ELSKAGLRNPVRV 135
+L+ L NPVR+
Sbjct: 393 QLTDQLLHNPVRI 405
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 240 (89.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 51/145 (35%), Positives = 85/145 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ + + V+S ++GG+ A ++ + + ++ TPGRL
Sbjct: 77 LVLTPTRELAQQVTDAVRTY-GAFMRVRSGAILGGMPYHAQLRLLSAP-VDFIVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R LD LE+LVLDEADR+LDMGF + I + P R+T LF+AT A+
Sbjct: 135 VDLLDRRS-LDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQTLLFTATMDSAMA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSH-HV 146
L+ LR P R+++ +H H+
Sbjct: 194 RLAGRLLREPERIDIAGTKTTHEHI 218
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 52/145 (35%), Positives = 87/145 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M+I PTREL+ Q+ + + ++K + L GG + +E GA++++GTPGRL
Sbjct: 82 MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEH-GAHVIVGTPGRL 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ + + L NL +LVLDEADR+L+MGFQ + I+ R P R+T LFSAT + ++
Sbjct: 141 EEHVIK-GTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFSATFPDQIK 199
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVS 147
+S++ + +PV V++ + +S
Sbjct: 200 SISESIMTDPVMVKIASSEDQSTIS 224
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 52/145 (35%), Positives = 87/145 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M+I PTREL+ Q+ + + ++K + L GG + +E GA++++GTPGRL
Sbjct: 82 MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEH-GAHVIVGTPGRL 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ + + L NL +LVLDEADR+L+MGFQ + I+ R P R+T LFSAT + ++
Sbjct: 141 EEHVIK-GTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFSATFPDQIK 199
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVS 147
+S++ + +PV V++ + +S
Sbjct: 200 SISESIMTDPVMVKIASSEDQSTIS 224
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 243 (90.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 52/139 (37%), Positives = 86/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ VA+ ++ + + L VGG+++K+ + G ++LI TPGRL
Sbjct: 276 LVLVPTRELGIQVHTVARQ-LAQFTTISTCLAVGGLDLKSQEAALRA-GPDVLIATPGRL 333
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +EIL+LDEADR+LD F++Q+ II R+T LFSAT +E V+
Sbjct: 334 IDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRMCAYQRQTMLFSATMSEEVK 393
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+ PVR+ V + +
Sbjct: 394 DLASVSLKQPVRIFVNSNT 412
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 243 (90.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 62/157 (39%), Positives = 93/157 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SP REL+ Q V + F S D++SV +VGGV ++ + + ++++ TPGR
Sbjct: 143 LILSPNRELALQTVKVVKDF-SKGTDLRSVAIVGGVSLEEQFSLLSGK-PDIVVATPGRF 200
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M L+ ++E +V DEADRL +MGF Q++ I+ LP R+T LFSAT +
Sbjct: 201 LHLKVEMK-LELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFSATLPRTLV 259
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQ-LASSKT 158
+ +KAGL++PV V + ESK VSA Q S KT
Sbjct: 260 DFAKAGLQDPVLVRLDVESK---VSADLQSAFFSVKT 293
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 240 (89.5 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 52/147 (35%), Positives = 93/147 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + I ++ + GG+ K D +I G +++IGTPGRL
Sbjct: 188 LVMAPTRELAQQIEEVCKTSIRGT-SIRQLCAYGGLG-KIDQSRILRNGVDIVIGTPGRL 245
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + + +++ LVLDEADR+LDMGF QI +I ++PK R+T +FSAT + V+
Sbjct: 246 NDLLRKHHL---SSVQYLVLDEADRMLDMGFMPQIESLIDQIPKERQTLMFSATWPKEVK 302
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSAS 149
L+ L++P+++ V ++ + ++ +
Sbjct: 303 LLASKFLKDPIKITVGSQELTGSINVT 329
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 228 (85.3 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 58/176 (32%), Positives = 98/176 (55%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q + Q + + +L+GG + K++ ++ + G N+LI TPGRL
Sbjct: 182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK-GINILISTPGRL 240
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP---KLRRTGLFSATQTE 119
D ++ + F + LV+DEADR+LD+GF+K ++ I++ + + R+ L SAT TE
Sbjct: 241 VDHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTE 300
Query: 120 AVEELSKAGLRNPVRVEVRAES--KSHHVSASSQQLASSKTPLGLHLEYLECEPDE 173
V L+ L NPV + V +S + + +S QL S P L +Y+ P +
Sbjct: 301 GVTRLADISLHNPVSISVLDKSWDQPNPKEVASIQLDSFAIPESLD-QYVVLVPSK 355
Score = 37 (18.1 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 216 LSLIPLHGKMKQ 227
L + LHG MKQ
Sbjct: 417 LKFLRLHGNMKQ 428
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 241 (89.9 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 61/153 (39%), Positives = 98/153 (64%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 300 ISLVLAPTRELALQIYDEARKF-SYRSHVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 357
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LD+ N LVLDEADR+LDMGF+ QI I+ + PK LR+T +FSA
Sbjct: 358 RLLDMMERGKIGLDYCNY--LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSA 415
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + + V R S S +++
Sbjct: 416 TFPKEIQILARDFLEDYIFLAVGRVGSTSENIT 448
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 235 (87.8 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 58/152 (38%), Positives = 90/152 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP--DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++ PTREL+ Q V Q F+ D++ + GGV ++A + + G ++LI TPG
Sbjct: 79 LVLVPTRELALQ---VQQSFVKYAKGTDIRVGIAYGGVSIEAQ-QAVFNAGIDVLIATPG 134
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R L+ L LV DEADR+LDMGF +I ++ ++P R+T LFSAT ++
Sbjct: 135 RLLDHL-RQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDS 193
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
+ SK LR+P R+EV +K + +A +Q
Sbjct: 194 IFSFSKNLLRDPKRIEV---AKPNTTAAQIEQ 222
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 235 (87.8 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 58/152 (38%), Positives = 90/152 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP--DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++ PTREL+ Q V Q F+ D++ + GGV ++A + + G ++LI TPG
Sbjct: 79 LVLVPTRELALQ---VQQSFVKYAKGTDIRVGIAYGGVSIEAQ-QAVFNAGIDVLIATPG 134
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R L+ L LV DEADR+LDMGF +I ++ ++P R+T LFSAT ++
Sbjct: 135 RLLDHL-RQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDS 193
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
+ SK LR+P R+EV +K + +A +Q
Sbjct: 194 IFSFSKNLLRDPKRIEV---AKPNTTAAQIEQ 222
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 244 (91.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 52/143 (36%), Positives = 90/143 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I++PTREL++QI+ +PF+ L ++++V GG +K + +++ GA +++ TPG
Sbjct: 616 IGLIMTPTRELATQIHKDCKPFLKAL-NLRAVCAYGGAPIKDQIAELKR-GAEIIVCTPG 673
Query: 61 RLYDIMERMD--VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
R+ D++ V + R + +VLDEADR+ DMGF+ Q+ I+S + R+T LFSAT
Sbjct: 674 RMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFP 733
Query: 119 EAVEELSKAGLRNPVRVEVRAES 141
+E L++ L P+ + V S
Sbjct: 734 RNMEALARKTLTKPIEIVVGGRS 756
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 241 (89.9 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 51/139 (36%), Positives = 86/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ ++ + L VGG++VK+ + ++LI TPGRL
Sbjct: 262 LVLVPTRELGIQVHSVTKQ-LAQFCNITTCLAVGGLDVKSQEAALRA-APDILIATPGRL 319
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+ V+
Sbjct: 320 IDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVK 379
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NPVR+ V + +
Sbjct: 380 DLASVSLKNPVRIFVNSNT 398
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 51/139 (36%), Positives = 86/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ ++ + L VGG++VK+ + ++LI TPGRL
Sbjct: 283 LVLVPTRELGIQVHSVTKQ-LAQFCNITTCLAVGGLDVKSQEAALRA-APDILIATPGRL 340
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+ V+
Sbjct: 341 IDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVK 400
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NPVR+ V + +
Sbjct: 401 DLASVSLKNPVRIFVNSNT 419
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 51/139 (36%), Positives = 86/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ ++ + L VGG++VK+ + ++LI TPGRL
Sbjct: 293 LVLVPTRELGIQVHSVTRQ-LAQFCNITTCLAVGGLDVKSQEAALRA-APDILIATPGRL 350
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+ V+
Sbjct: 351 IDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVK 410
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NPVR+ V + +
Sbjct: 411 DLASVSLKNPVRIFVNSNT 429
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 216 (81.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 54/145 (37%), Positives = 85/145 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI+ A+P ++ +K L GG +K +E G ++LIGT GRL
Sbjct: 88 LIMAPTRELAVQIHADAEP-LAEATGLKLGLAYGGDGYDKQLKVLES-GVDILIGTTGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSATQTEA 120
D ++ + + ++++VLDEADR+ D+GF K I ++ R+P R LFSAT +
Sbjct: 146 IDYAKQNHI-NLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYR 204
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
V EL+ + N +EV E K+ H
Sbjct: 205 VRELAFEQMNNAEYIEVEPEQKTGH 229
Score = 39 (18.8 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 165 EYLECEPDEK 174
EY+E EP++K
Sbjct: 217 EYIEVEPEQK 226
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 240 (89.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 49/133 (36%), Positives = 85/133 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q++ V + +ST ++ L GG+++KA + G ++++ TPGRL
Sbjct: 223 LVLVPTRELAIQVFQVFRK-LSTFIQLEVCLCAGGLDLKAQEAALRS-GPDVVVATPGRL 280
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + N+E+LVLDEADR+L+ F+ Q++ +I + R+T LFSAT TE ++
Sbjct: 281 IDHLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEID 340
Query: 123 ELSKAGLRNPVRV 135
EL+ L+ PV++
Sbjct: 341 ELASMSLQKPVKI 353
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 240 (89.5 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 51/139 (36%), Positives = 85/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ + + L VGG++VK+ + ++LI TPGRL
Sbjct: 259 LVLVPTRELGIQVHSVTKQ-LAQFCSITTCLAVGGLDVKSQEAALRA-APDILIATPGRL 316
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+ V+
Sbjct: 317 IDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVK 376
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NPVR+ V + +
Sbjct: 377 DLASVSLKNPVRIFVNSNT 395
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 240 (89.5 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 51/139 (36%), Positives = 85/139 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q++ V + ++ + + L VGG++VK+ + ++LI TPGRL
Sbjct: 262 LVLVPTRELGIQVHSVTKQ-LAQFCSITTCLAVGGLDVKSQEAALRA-APDILIATPGRL 319
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+ V+
Sbjct: 320 IDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVK 379
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L+ L+NPVR+ V + +
Sbjct: 380 DLASVSLKNPVRIFVNSNT 398
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 239 (89.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL SQIY ++ F S V++ ++ GG ++ ++ ++ G +LL+ TPGRL
Sbjct: 273 LVMAPTRELVSQIYEESKKF-SYRSWVRACVVYGGADIGQQMRNMDR-GCDLLVATPGRL 330
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR--LP--KLRRTGLFSATQT 118
D+++R V N+ LVLDEADR+LDMGF+ QI YI+ +P K R+T +FSAT
Sbjct: 331 KDLLDRGKV-SLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFP 389
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQL 178
++ L++ L++ V + V V ++S+ + + L E DEK S +
Sbjct: 390 RDIQMLARDFLKDYVFLSVG------RVGSTSENITQ---------KILYVEDDEKKSVI 434
Query: 179 VDLL 182
+DLL
Sbjct: 435 LDLL 438
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 233 (87.1 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 54/141 (38%), Positives = 87/141 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q+ + + +KS+ + GGV+ +A +++ + G ++L+ TPGRL
Sbjct: 77 LILVPTRELAMQVAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQRLID-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F +E++VLDEADR+LDMGF + I+ II LP + LFSAT + V
Sbjct: 135 MDLYGQRAVY-FEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVR 193
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
EL+K +R+P + + A S
Sbjct: 194 ELAKTAVRDPHEISIAANQAS 214
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 233 (87.1 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 54/141 (38%), Positives = 87/141 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q+ + + +KS+ + GGV+ +A +++ + G ++L+ TPGRL
Sbjct: 77 LILVPTRELAMQVAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQRLID-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F +E++VLDEADR+LDMGF + I+ II LP + LFSAT + V
Sbjct: 135 MDLYGQRAVY-FEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVR 193
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
EL+K +R+P + + A S
Sbjct: 194 ELAKTAVRDPHEISIAANQAS 214
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 241 (89.9 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 53/140 (37%), Positives = 90/140 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SP+REL+ Q Y + F S +++S++L+GG ++ D K+ + ++++ TPGR
Sbjct: 172 VILSPSRELALQTYKQVKEF-SHGTNLQSIVLIGGDSLEEDFSKMMTK-PDIIVCTPGRF 229
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M D ++ +V DEADRL +MGF +Q++ +++ LP R++ LFSAT ++
Sbjct: 230 LHLKVEMQY-DLMTVQYIVFDEADRLFEMGFAEQLNELLASLPSNRQSLLFSATLPRSLV 288
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+ +KAGL NPV V + AESK
Sbjct: 289 DFAKAGLTNPVLVRLDAESK 308
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 239 (89.2 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 52/142 (36%), Positives = 86/142 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFI-STLPDVKSV--LLVGGVEVKADVKKIEEEGANLLIGTP 59
+++ PTREL Q++ V + S+L + ++ L GG++VK+ + ++LI TP
Sbjct: 286 LVLVPTRELGIQVHSVTKQLAQSSLCVITTISGLFAGGLDVKSQEAALRAAXPDILIATP 345
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL D + ++E+L+LDEADR+LD F++Q+ II R+T LFSAT T+
Sbjct: 346 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSLHRQTMLFSATMTD 405
Query: 120 AVEELSKAGLRNPVRVEVRAES 141
V++L+ L+NPVR+ V + +
Sbjct: 406 EVKDLASVSLKNPVRIFVNSNT 427
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 238 (88.8 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 60/164 (36%), Positives = 97/164 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + L V S + GGV + V+ + G ++L+ PGRL
Sbjct: 83 LVLTPTRELAAQVHDSFKLYARDLKFV-SACIFGGVGMNPQVQAMAR-GVDVLVACPGRL 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V D ++EILVLDEADR+LDMGF + +++RLP R+ LFSAT ++ +
Sbjct: 141 LDLAGQGSV-DLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDIT 199
Query: 123 ELSKAGLRNPVRVEVRAESKS-HHVSASSQQL-ASSKTPLGLHL 164
+L+ L NP R+EV + + + +L AS K L HL
Sbjct: 200 DLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLAHL 243
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 238 (88.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 61/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG E+ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGAEIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 238 (88.8 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 61/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG E+ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGAEIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 240 (89.5 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 56/141 (39%), Positives = 88/141 (62%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+I+SP+REL+ Q V + + D+KSVLLVGG ++ + +++I TPGR
Sbjct: 164 GLILSPSRELALQTLKVVKE-LGKGTDLKSVLLVGGDSLEEQFGMMAGN-PDIVIATPGR 221
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M+ LD +++ +V DEADRL +MGF Q++ I+ LP R+T LFSAT +++
Sbjct: 222 FLHLKVEMN-LDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLFSATLPKSL 280
Query: 122 EELSKAGLRNPVRVEVRAESK 142
E ++AGL++P V + ESK
Sbjct: 281 VEFARAGLQDPTLVRLDTESK 301
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 237 (88.5 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 57/141 (40%), Positives = 89/141 (63%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I+SPTREL+SQI+ A+ F S VK V+ GG + ++++E G ++L+ TPG
Sbjct: 239 LAVILSPTRELASQIHDEAKKF-SYQTGVKVVVAYGGTPINQQLRELER-GVDILVATPG 296
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL---PK-LRRTGLFSAT 116
RL D++ER V + + L LDEADR+LDMGF+ QI I+ ++ P+ +R+T LFSAT
Sbjct: 297 RLNDLLERARV-SMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSAT 355
Query: 117 QTEAVEELSKAGLRNPVRVEV 137
++ L+ L N + + V
Sbjct: 356 FPREIQRLAADFLANYIFLAV 376
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 237 (88.5 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 57/141 (40%), Positives = 87/141 (61%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I+SPTREL+ QI+ A+ F S VK V+ GG V ++++E G ++L+ TPG
Sbjct: 226 LAVILSPTRELACQIHDEARKF-SYQTGVKVVVAYGGTPVNQQIRELER-GVDILVATPG 283
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL----PKLRRTGLFSAT 116
RL D++ER V + + L LDEADR+LDMGF+ QI I+ ++ P +R+T LFSAT
Sbjct: 284 RLNDLLERGRV-SLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSAT 342
Query: 117 QTEAVEELSKAGLRNPVRVEV 137
++ L+ L N + + V
Sbjct: 343 FPREIQRLASDFLSNYIFLAV 363
>UNIPROTKB|F1NM06 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:AADN02026504
EMBL:AADN02026505 EMBL:AADN02026506 EMBL:AADN02026507
EMBL:AADN02026508 EMBL:AADN02026509 EMBL:AADN02026510
IPI:IPI00573288 ProteinModelPortal:F1NM06
Ensembl:ENSGALT00000005588 Uniprot:F1NM06
Length = 690
Score = 237 (88.5 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 50/141 (35%), Positives = 85/141 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q + Q + + +L+GG + K++ ++ + G N+LI TPGRL
Sbjct: 175 LVLVPTRELALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRK-GINILISTPGRL 233
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTG---LFSATQTE 119
D ++ + + FR + L++DEADR+LD+GF+K ++ I++ L R T L SAT TE
Sbjct: 234 VDHIKSTECIHFRRTQWLIIDEADRILDLGFEKDVTVILNALNAERETRQNVLLSATLTE 293
Query: 120 AVEELSKAGLRNPVRVEVRAE 140
V L+ L +P+R+ + E
Sbjct: 294 GVTRLADISLNDPIRISIADE 314
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 233 (87.1 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 53/139 (38%), Positives = 89/139 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ Q + LP +K++ + GG + K +E+ G ++L+ TPGRL
Sbjct: 76 LVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQ-GVDILVATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+DI+ + + LD ++ LV+DEADR+LD+GF + I + + + +T LFSAT ++AV+
Sbjct: 134 FDIIGQFN-LDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVK 192
Query: 123 ELSKAGLRNPVRVEVRAES 141
+LS L P V V AE+
Sbjct: 193 QLSHKMLNQPQWVNV-AEN 210
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 233 (87.1 bits), Expect = 6.3e-19, P = 6.3e-19
Identities = 53/139 (38%), Positives = 89/139 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ Q + LP +K++ + GG + K +E+ G ++L+ TPGRL
Sbjct: 76 LVMTPTRELAIQVCANIQKYSQFLP-LKTLAVYGGANMNPQRKGVEQ-GVDILVATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+DI+ + + LD ++ LV+DEADR+LD+GF + I + + + +T LFSAT ++AV+
Sbjct: 134 FDIIGQFN-LDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVK 192
Query: 123 ELSKAGLRNPVRVEVRAES 141
+LS L P V V AE+
Sbjct: 193 QLSHKMLNQPQWVNV-AEN 210
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 234 (87.4 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 62/165 (37%), Positives = 89/165 (53%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I++PTREL+ QI + +L V+S +VGG+ + + + + +++I TPGRL
Sbjct: 154 ILAPTRELAQQIKETFDS-LGSLMGVRSTCIVGGMNMMDQARDLMRK-PHIIIATPGRLM 211
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTG-LFSATQTEAVE 122
D +E R L+ LV+DEADRLLDM F + I+ +P RT LFSAT T ++
Sbjct: 212 DHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKID 271
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYL 167
+L +A L NPV+ V +K V Q L P GL YL
Sbjct: 272 KLQRASLTNPVKCAV--SNKYQTVDTLVQTLMV--VPGGLKNTYL 312
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 236 (88.1 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 52/134 (38%), Positives = 89/134 (66%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL+ QI A+ +S LP +++ LLVGG+ ++ + ++I TPGR
Sbjct: 275 GLVLTPTRELAIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQR-IQVIIATPGR 333
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI+++ V + +++I+V+DEAD +L MGFQ+Q+ ++ +LP +T L SAT +V
Sbjct: 334 LLDIIKQRSV-ELGSIKIVVVDEADTMLKMGFQQQVLDVLEQLPHDCQTVLASATIPASV 392
Query: 122 EELSKAGLRNPVRV 135
E+L+ LR+PV +
Sbjct: 393 EQLACQLLRDPVAI 406
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 236 (88.1 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 59/164 (35%), Positives = 96/164 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + L V S + GGV + V+ + G ++L+ PGRL
Sbjct: 83 LVLTPTRELAAQVHESFKLYARDLKFV-SACIFGGVGMNPQVQAMSR-GVDVLVACPGRL 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V D ++EILVLDEADR+LDMGF + +++RLP R+ LFSAT + +
Sbjct: 141 LDLAGQGSV-DLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSNDIT 199
Query: 123 ELSKAGLRNPVRVEVRAESKS-HHVSASSQQLASS-KTPLGLHL 164
L+ L NP R+EV + + + +LA++ K L HL
Sbjct: 200 SLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLLAHL 243
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 238 (88.8 bits), Expect = 7.3e-19, P = 7.3e-19
Identities = 61/179 (34%), Positives = 99/179 (55%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ Q + V + + ++ LVGG +++ I E ++L+ TPGRL
Sbjct: 97 LMVSPTRELALQTFKVVKE-LGRFTGLRCACLVGGDQIEEQFSTIHEN-PDILLATPGRL 154
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
++ MD L ++ +V DEADRL +MGFQ Q++ + R+P+ R+T LFSAT + +
Sbjct: 155 LHVIVEMD-LRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPKMLV 213
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+ +KAGL +P+ V + + K S K L + + C PDEK L+ L
Sbjct: 214 DFAKAGLTDPMLVRLDVDEK-----------VSDK----LSMVFCMCRPDEKLFALLHL 257
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 235 (87.8 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 46/139 (33%), Positives = 89/139 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q V + F + P + ++ L GG + +++++ G ++ +GTPGR+
Sbjct: 182 LVLAPTRELARQ---VEKEFRESAPSLDTICLYGGTPIGQQMRQLDY-GVDVAVGTPGRV 237
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+M+R L+ ++ +VLDEAD++L +GF + + I+ +LP+ R++ +FSAT +
Sbjct: 238 IDLMKR-GALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFSATMPSWIR 296
Query: 123 ELSKAGLRNPVRVEVRAES 141
L+K L NP+ V++ +S
Sbjct: 297 SLTKKYLNNPLTVDLVGDS 315
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 88 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 146
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 147 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 205
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 206 EVTKKFMRDPIRILVKKE 223
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 235 (87.8 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 52/135 (38%), Positives = 82/135 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL++QI A F + L GG ++ +E GA++++ TPGRL
Sbjct: 234 LVLSPTRELATQIQEEAVKF-GRSSRISCTCLYGGAPKGPQLRDLER-GADIVVATPGRL 291
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+E M + R + LVLDEADR+LDMGF+ QI I+ +P R+T +++AT + V
Sbjct: 292 NDILE-MRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVR 350
Query: 123 ELSKAGLRNPVRVEV 137
+++ L NP +V +
Sbjct: 351 KIAADLLVNPAQVNI 365
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 226 (84.6 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 230 (86.0 bits), Expect = 8.7e-19, P = 8.7e-19
Identities = 52/138 (37%), Positives = 88/138 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI VA +S +++ VGG + DVKK+E G +++ GTPGR+
Sbjct: 104 LILSPTRELAQQIQKVALA-LSEFMNIQVHACVGGKNLSDDVKKLET-GVHIVSGTPGRV 161
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ R L R++++++LDEAD +L +GFQ+QI+ + LP + L SAT T+ V
Sbjct: 162 LDMITRKS-LPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVV 220
Query: 123 ELSKAGLRNPVRVEVRAE 140
+++ + PVR+ ++ +
Sbjct: 221 SMTEKFMTKPVRILLKRD 238
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 236 (88.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 56/160 (35%), Positives = 92/160 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q + Q + + +L+GG + K++ ++ + G N+LI TPGRL
Sbjct: 211 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK-GINILISTPGRL 269
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP---KLRRTGLFSATQTE 119
D ++ + FR + L+LDEADR+LD+GF+K ++ I++ + + R+ L SAT TE
Sbjct: 270 VDHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLTVILNAVNAECQERQNVLLSATLTE 329
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
V L+ L +PV + V ES H VS+ + +P
Sbjct: 330 GVARLADISLHDPVSISVLDES--HDVSSPESEAFLEASP 367
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 235 (87.8 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 263 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 320
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 321 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 378
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 379 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 411
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 235 (87.8 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 266 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 323
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 324 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 381
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 382 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 414
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 235 (87.8 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 266 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 323
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 324 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 381
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 382 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 414
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 235 (87.8 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 267 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 324
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 325 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 382
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 383 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 415
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 235 (87.8 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 267 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 324
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 325 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 382
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 383 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 415
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 235 (87.8 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 235 (87.8 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 235 (87.8 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 235 (87.8 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 269 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 326
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 327 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 384
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 385 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 417
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 236 (88.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 53/136 (38%), Positives = 85/136 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFIS-TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL +Q+Y V + T DV L +GG++VKA + + + +++I TPGR
Sbjct: 233 LVLVPTRELGAQVYQVTKQLCQFTTIDVG--LAIGGLDVKAQ-EAVLRQNPDIVIATPGR 289
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ ++E+L+LDEADR+LD F +Q+ II+ K R+T LFSAT +E V
Sbjct: 290 LIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQV 349
Query: 122 EELSKAGLRNPVRVEV 137
++L+ L P++V V
Sbjct: 350 KDLAAVSLDKPIKVFV 365
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 229 (85.7 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 49/138 (35%), Positives = 84/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V L +KS +GG ++ D++ ++ G ++++GTPGR+
Sbjct: 96 LIIAPTRELAQQIQKVVLALGEYL-HIKSYACIGGTKITDDIQALQS-GVHVVVGTPGRV 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
++++ R +++ + I LDEAD +L GF+ QI I LPK + GLFSAT T+
Sbjct: 154 FEMLSR-GIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGLFSATMTDETL 212
Query: 123 ELSKAGLRNPVRVEVRAE 140
++ ++NPV + V+ +
Sbjct: 213 GITSKFMQNPVSILVKKD 230
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 233 (87.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 51/143 (35%), Positives = 89/143 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTL-----PDVKSVLLVGGVEVKADVKKIEEEGANLL 55
+ ++I P+REL+ Q Y V + F+++L P ++S+L +GGV++++ + +++ G +++
Sbjct: 175 IALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKK-GVHIV 233
Query: 56 IGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
+ TPGRL DI+ + + LD L L LDEADRL+D+GF+ I ++ R+T LFS
Sbjct: 234 VATPGRLKDILAKKKMSLDACRL--LTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFS 291
Query: 115 ATQTEAVEELSKAGLRNPVRVEV 137
AT ++ + + L PV V V
Sbjct: 292 ATMPAKIQIFATSALVKPVTVNV 314
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 234 (87.4 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 49/141 (34%), Positives = 82/141 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M+++PTREL+ Q+ + F + ++ L GG +++E GA +++GTPGRL
Sbjct: 87 MVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLER-GAQVVVGTPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R L L + VLDEAD +L+MGF + I +I+ +PK + LFSAT A+
Sbjct: 146 MDHLRRKS-LKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSATMPPAIR 204
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+++ L++P ++V A K+
Sbjct: 205 KIANRFLKDPEHIKVAAVKKA 225
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 235 (87.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 60/153 (39%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 310 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 367
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 368 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 425
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 426 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 458
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 233 (87.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 65/184 (35%), Positives = 109/184 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ A+ F S VK V+ GG + ++++E G ++L+ TPGRL
Sbjct: 233 VILSPTRELACQIHDEAKKF-SYQTGVKVVVAYGGTPIHQQLRELER-GCDILVATPGRL 290
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL---PK-LRRTGLFSATQT 118
D++ER V + + L LDEADR+LDMGF+ QI I+ ++ P+ +R+T LFSAT
Sbjct: 291 NDLLERARV-SMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFP 349
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQL 178
++ L+ A+ S+++ + ++ SS + +E+++ E D++ S L
Sbjct: 350 SQIQRLA-------------ADFMSNYIFLAVGRVGSSTDLITQRVEFVQ-ESDKR-SHL 394
Query: 179 VDLL 182
+DLL
Sbjct: 395 MDLL 398
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 234 (87.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 75/231 (32%), Positives = 121/231 (52%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVE-VKADVKKIEEEGANLLIGTPGR 61
+++SPTRELS QI++ ++ F P + S LL GG E K + K+ G ++LI TPGR
Sbjct: 319 LVLSPTRELSLQIFNESRKFAYRTP-ITSALLYGGRENYKDQIHKLRL-GCHILIATPGR 376
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII--SRLPKL--RRTGLFSATQ 117
L D+M++ ++ LVLDEADR+LDMGF+ QI I+ +R+P R T +FSAT
Sbjct: 377 LIDVMDQ-GLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATF 435
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQ 177
+ ++ L++ L K ++V + ++ S+ + + ++E DEK S
Sbjct: 436 PKEIQLLAQDFL------------KENYVFLAVGRVGSTSENIMQKIVWVE--EDEKRSY 481
Query: 178 LVDLLXXXXXXXXXXYFM-TCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L+DLL F+ T L R ++ ++ +HG +KQ
Sbjct: 482 LMDLLDATGDSSLTLVFVETKRGASDLAYYLNR----QNYEVVTIHGDLKQ 528
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 233 (87.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 62/184 (33%), Positives = 102/184 (55%)
Query: 2 GMIISPTRELSSQIYH-VAQPFIST----LPDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ QI+ + + F + LP++++ L +GGV + K + + G ++++
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRD-GIHIVV 327
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D++ + +++ LVLDEADR+LDMGF+ +I I R+T LFSAT
Sbjct: 328 ATPGRLSDMLTKK-IINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSAT 386
Query: 117 QTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
++ +K+ L P+ V V RA + S +V + S+ L + LEC P
Sbjct: 387 MPRKIQFFAKSALVKPIVVNVGRAGAASLNV-LQELEFVRSENKL---VRVLECLQKTSP 442
Query: 176 SQLV 179
L+
Sbjct: 443 KVLI 446
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 228 (85.3 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 53/138 (38%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI V + V S +GG V+ D + I E G ++++GTPGR+
Sbjct: 102 LILAPTRELATQIQRVVMA-LGEYMKVHSHACIGGTNVREDAR-ILESGCHVVVGTPGRV 159
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
YD++ R VL + +++ VLDEAD +L GF+ QI + LP + L SAT V
Sbjct: 160 YDMINRK-VLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVL 218
Query: 123 ELSKAGLRNPVRVEVRAE 140
E+S+ +R+PV + V+ E
Sbjct: 219 EVSRCFMRDPVSILVKKE 236
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 230 (86.0 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 55/139 (39%), Positives = 80/139 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL++Q+ + L K+ LL+GGV K I+ G ++LI TPGRL
Sbjct: 77 LVLCPTRELAAQVAENFDTYTKHLKLTKA-LLIGGVSFKEQDALIDR-GVDVLIATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ER +L ++I+V+DEADR+LDMGF I I S P R+T FSAT +E
Sbjct: 135 LDHFERGKLL-LTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIE 193
Query: 123 ELSKAGLRNPVRVEVRAES 141
++ L P R+EV ++
Sbjct: 194 RITNTFLSAPARIEVARQA 212
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 232 (86.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/186 (31%), Positives = 105/186 (56%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTL-----PDVKSVLLVGGVEVKADVKKIEEEGANLL 55
+G+I+ P+REL+ Q Y V + F++ L P ++S+L +GG+++++ ++ ++ G +++
Sbjct: 224 IGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKR-GVHIV 282
Query: 56 IGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
+ TPGRL D++ + + LD L LDEADRL+D+GF+ I + R+T LFS
Sbjct: 283 VATPGRLKDMLAKKKMSLDA--CRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFS 340
Query: 115 ATQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDE 173
AT ++ +++ L PV V V RA + + V Q++ K + + LEC
Sbjct: 341 ATMPTKIQIFARSALVKPVTVNVGRAGAANLDVI---QEVEYVKQEAKI-VYLLECLQKT 396
Query: 174 KPSQLV 179
P L+
Sbjct: 397 SPPVLI 402
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 229 (85.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 63/166 (37%), Positives = 96/166 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI + + + ++SV + GGV V V+K++ GA +++ PGRL
Sbjct: 74 LVIAPTRELAEQI-NDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKA-GAEVVVACPGRL 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +D LE+LVLDEAD++ DMGF I ++ LP R+T LFSAT +
Sbjct: 132 LDHIAQ-GTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMPIDIR 190
Query: 123 ELSKAGLRNPVRVEVR----AESKSHHVSASSQQLASSKTPLGLHL 164
L++ L +PV V+V A + +H + Q L KTPL L L
Sbjct: 191 TLAQDILVDPVTVQVGTVAPAVTVAHALYPVEQHL---KTPLLLEL 233
>DICTYBASE|DDB_G0271708 [details] [associations]
symbol:ddx31 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0271708 GO:GO:0005524
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HSSP:P10081
RefSeq:XP_645498.1 ProteinModelPortal:Q869P0
EnsemblProtists:DDB0234202 GeneID:8618126 KEGG:ddi:DDB_G0271708
OMA:THIQEAS Uniprot:Q869P0
Length = 908
Score = 235 (87.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 61/187 (32%), Positives = 102/187 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTRELSSQIY Q + + +++GG A+ +I + G N+L+ TPGRL
Sbjct: 284 VIITPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRK-GINILVATPGRL 342
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF-------SA 115
D ++ N++ +LDEAD+LLD+GF+K ++ II+ L +RT F SA
Sbjct: 343 LDHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKFKRQNILVSA 402
Query: 116 TQTEAVEELSKAGLRNPVRVEVRA---ESKSHHVSASSQQLASSKTPLGLHLEYLECEPD 172
T +E + L+ L +PV + + + E + A+ +++ + P L Y+E E
Sbjct: 403 TLSEGISRLASLSLTSPVYIGLDSKVLEKGENPFQAAEKEMLQA--PKQLDQFYVEVESK 460
Query: 173 EKPSQLV 179
E+ + L+
Sbjct: 461 ERLTSLI 467
>TIGR_CMR|SPO_3833 [details] [associations]
symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
Length = 709
Score = 233 (87.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 50/155 (32%), Positives = 92/155 (59%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I++PTREL+ Q+ ++ + +GG++ + + + +E GA++++GTPG
Sbjct: 97 LALIVAPTRELALQVSRELT-WLFAKAGGRIATCIGGMDARTERRTLER-GAHIVVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R LD ++ +VLDEAD +LD+GF++ + +++ P+ RRT LFSAT + A
Sbjct: 155 RLRDHITR-GALDLADIRAVVLDEADEMLDLGFREDLEFMLGEAPEDRRTLLFSATVSPA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH-VSASSQQLA 154
+ EL+K R R+ + H +S + Q++
Sbjct: 214 IAELAKTYQRQAARISTLGGERQHSDISYQAVQVS 248
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 232 (86.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 59/153 (38%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F + V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 245 ISLVLAPTRELAVQIYEEARKF-AYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 302
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 303 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 360
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 361 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 393
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 232 (86.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 59/153 (38%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F + V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 246 ISLVLAPTRELAVQIYEEARKF-AYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 303
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 304 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 361
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 362 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 394
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 235 (87.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 51/143 (35%), Positives = 86/143 (60%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I++PTREL+ QI+ +PF+ L ++++ GG +K + ++ GA +++ TPG
Sbjct: 493 IAIIMTPTRELAVQIFRECKPFLKLL-NIRACCAYGGAPIKDQIADLKR-GAEIVVCTPG 550
Query: 61 RLYDIMERMD--VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
R+ D++ V + LVLDEADR+ D+GF+ Q+ II+ + R+T LFSAT
Sbjct: 551 RMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFP 610
Query: 119 EAVEELSKAGLRNPVRVEVRAES 141
A+E L++ L+ PV + V S
Sbjct: 611 RAMEALARKVLKKPVEITVGGRS 633
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 232 (86.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 60/153 (39%), Positives = 95/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG + ++ +E G +LL+ TPG
Sbjct: 261 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADTVQQIRDLER-GCHLLVATPG 318
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 319 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 377 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 409
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 232 (86.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 60/153 (39%), Positives = 95/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V+ ++ GG + ++ +E G +LL+ TPG
Sbjct: 267 ISLVLAPTRELAVQIYEEARKF-SYRSRVRPCVVYGGADTVQQIRDLER-GCHLLVATPG 324
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI I+ + PK +R T +FSA
Sbjct: 325 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 382
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 383 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 415
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 232 (86.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 61/153 (39%), Positives = 95/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F S V ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 268 ISLVLAPTRELAVQIYEEARKF-SYRSRVLPCVVYGGADIGQQIRDLER-GCHLLVATPG 325
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LDF + LVLDEADR+LDMGF+ QI II + PK +R T +FSA
Sbjct: 326 RLVDMMERGKIGLDF--CKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSA 383
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 384 TFPKEIQMLARDFLDEYIFLAVGRVGSTSENIT 416
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 231 (86.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 55/150 (36%), Positives = 96/150 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++QI+ A+ F + V+ ++ GG + +++++ G +LL+ TPGRL
Sbjct: 241 LVLAPTRELATQIFEEARKF-TYRSWVRPCVVYGGAPIGNQMREVDR-GCDLLVATPGRL 298
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR--LPKL--RRTGLFSATQT 118
D++ER V N++ LVLDEADR+LDMGF+ QI +I+ +P + R+T +FSAT
Sbjct: 299 NDLLERGKV-SLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFP 357
Query: 119 EAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
++ L++ L N + + V R S S +++
Sbjct: 358 VDIQHLARDFLDNYIFLSVGRVGSTSENIT 387
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 227 (85.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 57/154 (37%), Positives = 97/154 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIE-EEGANLLIGTPGR 61
+I++PTREL+ QI+ A + ++ ++ GG ++ +++E E G ++LIGT GR
Sbjct: 85 LIMAPTRELAIQIHRDATEMAKST-GLRLGVVYGGEGYES--QRLELEAGVDILIGTCGR 141
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSATQTE 119
L D M++ + + +N+E++VLDEADR+ D+GF K I Y+ ++P R + LFSAT +
Sbjct: 142 LIDYMKQ-GIYNLKNIEVIVLDEADRMFDLGFIKDIRYMFDKMPPATERLSMLFSATLSF 200
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
V+EL+ + +P VEV E K++ S S++L
Sbjct: 201 RVKELAFDHMNDPTSVEVEPEQKTN--SRISEEL 232
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 230 (86.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 57/172 (33%), Positives = 92/172 (53%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + L + + + GG + + GA +++GTPGR+
Sbjct: 85 LVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR-GAQVVVGTPGRM 143
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER LD ++ LVLDEAD +L MGF + I+S P+ ++ LFSAT A+
Sbjct: 144 IDHLERA-TLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPPAIR 202
Query: 123 ELSKAGLRNPVRVEVRAESK-SHHVSASSQQLASSKTPLGLHLEYLECEPDE 173
+LS L +P V +A++ + ++S S Q+A L LE EP E
Sbjct: 203 KLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARKMDAL---TRVLEVEPFE 251
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 227 (85.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 51/164 (31%), Positives = 95/164 (57%)
Query: 2 GMIISPTRELSSQIYHVAQPF-ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G+++ PTREL+ Q+ + + + ++K++ + GGV V + + G ++L+ TPG
Sbjct: 88 GLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVNIQMLALRG-GVDILVATPG 146
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D++ + + ++ LVLDEADR+L +GF ++++ +++ PK ++T LFSAT E
Sbjct: 147 RLLDLISS-NAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTPKKKQTLLFSATFPEQ 205
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHL 164
V L++ L NP+ +++++ S V KT + HL
Sbjct: 206 VTTLTQELLNNPIEIQLQSADASTLVQRVFTVNKGEKTAVLAHL 249
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 226 (84.6 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 222 EVTKKFMRDPIRILVKKE 239
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 233 (87.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 57/166 (34%), Positives = 94/166 (56%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + + +K+ L++GG +++ + E +++I TPGRL
Sbjct: 169 LILSPTRELALQTMKFTKE-LGKFTGLKTALILGGDKMEDQFAALHEN-PDIIIATPGRL 226
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M+ L +++E +V DEADRL +MGF +Q+ II RLP +T LFSAT + +
Sbjct: 227 VHVAVEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLV 285
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLE 168
E ++AGL PV + + +SK + +S L T + L L+
Sbjct: 286 EFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVREDTKAAVLLYLLQ 331
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 233 (87.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 58/164 (35%), Positives = 95/164 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + + +K+ L++GG +++ + E +++I TPGRL
Sbjct: 170 LILSPTRELALQTMKFTKE-LGKFTGLKTALILGGDKMEDQFAALHEN-PDIIIATPGRL 227
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M+ L +++E +V DEADRL +MGF +Q+ II RLP +T LFSAT + +
Sbjct: 228 VHVAVEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLV 286
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLA--SSKTPLGLHL 164
E ++AGL PV + + +SK + +S L +K + LHL
Sbjct: 287 EFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVREDAKAAVLLHL 330
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 230 (86.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 60/177 (33%), Positives = 99/177 (55%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-----STLPDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + +LP ++ L +GG+ VK ++ I+ G ++++
Sbjct: 256 GLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKH-GVHMMV 314
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 315 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 372
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L P+ + V RA + S V + + + L LE L+ P
Sbjct: 373 TMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYL-LECLQKTP 428
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 232 (86.7 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 56/152 (36%), Positives = 95/152 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G++++PTREL++QI+ A+ F + ++ +L GG +++++ G +L++ TPG
Sbjct: 380 LGLVLAPTRELATQIFEEAKKF-AYRSRMRPAVLYGGNNTSEQMRELDR-GCHLIVATPG 437
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL--PKL--RRTGLFSAT 116
RL D++ R V N+ LVLDEADR+LDMGF+ QI I+ +L P R+T +FSAT
Sbjct: 438 RLEDMITRGKV-GLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSAT 496
Query: 117 QTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
+ ++EL+ L N + + V R S S +++
Sbjct: 497 FPKQIQELASDFLSNYIFLAVGRVGSTSENIT 528
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 230 (86.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 45/139 (32%), Positives = 87/139 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q V + F + P + ++ L GG + ++++ G ++ +GTPGR+
Sbjct: 194 LVLAPTRELARQ---VEKEFRESAPSLDTICLYGGTPIGQQMRELNY-GIDVAVGTPGRI 249
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+M+R L+ ++ +VLDEAD++L +GF + + I+ +LP R++ +FSAT +
Sbjct: 250 IDLMKR-GALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIR 308
Query: 123 ELSKAGLRNPVRVEVRAES 141
L+K L NP+ +++ +S
Sbjct: 309 SLTKKYLNNPLTIDLVGDS 327
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 230 (86.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 58/184 (31%), Positives = 103/184 (55%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTL-----PDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + Q + L P+++S L +GG+ V ++ + G ++++
Sbjct: 256 GLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPV-SEALDVISRGVHIVV 314
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D++++ +L L +DEADR++DMGF++ + I S R+T LFSAT
Sbjct: 315 ATPGRLMDMLDKK-ILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSAT 373
Query: 117 QTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
+ ++ +++ L PV + V RA + S +V+ QQ+ K + + L+C P
Sbjct: 374 MPKKIQNFARSALVKPVTINVGRAGAASMNVT---QQVEYVKQEAKV-VYLLDCLQKTAP 429
Query: 176 SQLV 179
L+
Sbjct: 430 PVLI 433
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 226 (84.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 48/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 121 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 179
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 180 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 238
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 239 EVTKKFMRDPIRILVKKE 256
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 232 (86.7 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 57/168 (33%), Positives = 95/168 (56%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + + +K+ L++GG +++ + E +++I TPGRL
Sbjct: 109 LILSPTRELALQTLKFTKE-LGKFTGLKTALVLGGDKMEDQFAALHEN-PDIIIATPGRL 166
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M+ L +++E +V DEADRL +MGF +Q+ I++RLP +T LFSAT + +
Sbjct: 167 VHVAVEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEILARLPGSHQTVLFSATLPKLLV 225
Query: 123 ELSKAGLRNPVRVEVRAESK-SHHVSASSQQLASSKTPLGLHLEYLEC 169
E ++AGL P+ + + ESK S + + + P L L L C
Sbjct: 226 EFARAGLTEPMLIRLDVESKLSEQLKLAFFHVRGDDKPAVL-LHLLRC 272
Score = 191 (72.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 53/149 (35%), Positives = 81/149 (54%)
Query: 34 LVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGF 93
LV G + D E +++I TPGRL + M+ L +++E +V DEADRL +MGF
Sbjct: 138 LVLGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMN-LKLQSVEYVVFDEADRLFEMGF 196
Query: 94 QKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
+Q+ I++RLP +T LFSAT + + E ++AGL P+ + + ESK S+QL
Sbjct: 197 AEQLQEILARLPGSHQTVLFSATLPKLLVEFARAGLTEPMLIRLDVESKL------SEQL 250
Query: 154 ASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
L + D+KP+ L+ LL
Sbjct: 251 K---------LAFFHVRGDDKPAVLLHLL 270
>UNIPROTKB|Q8TDD1 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006396
"RNA processing" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 GO:GO:0030520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
EMBL:AF478457 EMBL:AC089999 EMBL:AY148094 EMBL:BC005848
IPI:IPI00152510 IPI:IPI00879999 RefSeq:NP_001104792.1
RefSeq:NP_076977.3 UniGene:Hs.506861 ProteinModelPortal:Q8TDD1
SMR:Q8TDD1 IntAct:Q8TDD1 STRING:Q8TDD1 PhosphoSite:Q8TDD1
DMDM:46576615 SWISS-2DPAGE:Q8TDD1 PaxDb:Q8TDD1 PRIDE:Q8TDD1
DNASU:79039 Ensembl:ENST00000306014 Ensembl:ENST00000314045
GeneID:79039 KEGG:hsa:79039 UCSC:uc001tup.3 UCSC:uc001tuq.4
CTD:79039 GeneCards:GC12M113595 HGNC:HGNC:20084 HPA:HPA028244
MIM:611665 neXtProt:NX_Q8TDD1 PharmGKB:PA134992026
HOVERGEN:HBG051333 InParanoid:Q8TDD1 ChiTaRS:DDX54 GenomeRNAi:79039
NextBio:67773 ArrayExpress:Q8TDD1 Bgee:Q8TDD1 CleanEx:HS_DDX54
Genevestigator:Q8TDD1 GermOnline:ENSG00000123064 Uniprot:Q8TDD1
Length = 881
Score = 232 (86.7 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 58/174 (33%), Positives = 98/174 (56%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + + +K+ L++GG ++ + E +++I TPGRL
Sbjct: 170 LILSPTRELALQTLKFTKE-LGKFTGLKTALILGGDRMEDQFAALHEN-PDIIIATPGRL 227
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M L +++E +V DEADRL +MGF +Q+ II+RLP +T LFSAT + +
Sbjct: 228 VHVAVEMS-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLV 286
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLA--SSKTPLGLHLEYLECEPDEK 174
E ++AGL PV + + ++K + +S L +K + LHL + P ++
Sbjct: 287 EFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQ 340
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 230 (86.0 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 57/150 (38%), Positives = 97/150 (64%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL SQI+ A+ F + V+ ++ GG ++ + +++IE G +LL+ TPGRL
Sbjct: 275 LILAPTRELVSQIFDEARKF-AYRSWVRPCVVYGGADIGSQLRQIER-GCDLLVATPGRL 332
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR--LPKL--RRTGLFSATQT 118
D++ER + N++ L+LDEADR+LDMGF+ QI I+ +P + R+T +FSAT
Sbjct: 333 VDLIERGRI-SLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFP 391
Query: 119 EAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
++ L++ L++ V + V R S S +++
Sbjct: 392 RDIQMLARDFLKDYVFLSVGRVGSTSENIT 421
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 58/164 (35%), Positives = 96/164 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + + +K+ L++GG +++ + E +++I TPGRL
Sbjct: 169 LILSPTRELALQTMKFTKE-LGKFTGLKTALILGGDKMEDQFAALHEN-PDIIIATPGRL 226
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ M+ L +++E +V DEADRL +MGF +Q+ II RLP +T LFSAT + +
Sbjct: 227 VHVAVEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLV 285
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLA--SSKTPLGLHL 164
E ++AGL PV + + +SK + +S L +KT + L+L
Sbjct: 286 EFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVREDTKTAVLLYL 329
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 228 (85.3 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 53/135 (39%), Positives = 84/135 (62%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + L + LL+GGV K + + + + G ++LI TPGRL
Sbjct: 79 LILCPTRELAAQVAENFEKYGKYLK-LTMALLIGGVSFK-EQETLLQRGVDVLIATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +R +L +E L++DEADR+LDMGF I I ++LP R+T LFSAT ++
Sbjct: 137 MDQFDRGKLL-MMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLLFSATFPTDIQ 195
Query: 123 ELSKAGLRNPVRVEV 137
L+K ++P ++EV
Sbjct: 196 RLAKTFQKDPKKIEV 210
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 231 (86.4 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 53/135 (39%), Positives = 84/135 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I++PTRELS QIY+ A+ F + ++ V GG K + K E+GA +++ TPG
Sbjct: 344 IGLILAPTRELSLQIYNEAKKF-GKVYNLNVVCCYGGGS-KWEQSKALEQGAEIIVATPG 401
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D M +M + R + LVLDEADR+ MGF+ Q+ I + + R+ +FSAT +
Sbjct: 402 RMID-MVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKR 460
Query: 121 VEELSKAGLRNPVRV 135
+E L++ L +PVR+
Sbjct: 461 IERLARDVLSDPVRI 475
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 230 (86.0 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 52/135 (38%), Positives = 83/135 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL++QI A F + + L GG +K+IE G ++++ TPGRL
Sbjct: 305 LVLSPTRELATQIQVEALKFGKS-SKISCACLYGGAPKGPQLKEIER-GVDIVVATPGRL 362
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+E M + + LVLDEADR+LDMGF+ QI I++ +P R+T +++AT + V
Sbjct: 363 NDILE-MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVR 421
Query: 123 ELSKAGLRNPVRVEV 137
+++ L NP +V +
Sbjct: 422 KIAADLLVNPAQVNI 436
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 224 (83.9 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 51/138 (36%), Positives = 84/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + L VK VGG V+ D ++I + G ++++GTPGR+
Sbjct: 111 LVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED-QRILQAGVHVVVGTPGRV 168
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D+++R L N+++ VLDEAD +L GF+ QI I LP + G+FSAT
Sbjct: 169 FDMLKRQS-LRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEAL 227
Query: 123 ELSKAGLRNPVRVEVRAE 140
E+++ + PVR+ V+ +
Sbjct: 228 EITRKFMSKPVRILVKRD 245
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 228 (85.3 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 46/136 (33%), Positives = 87/136 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q+Y + + ++ L VGG+ ++ ++++ +++I TPGRL
Sbjct: 203 IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTR-PDIVIATPGRL 261
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRR-TGLFSATQTEAV 121
D + +++++LV+DEADR+L+ GFQ +++ I+S +PK +R T LFSAT +
Sbjct: 262 IDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSATMNTRI 321
Query: 122 EELSKAGLRNPVRVEV 137
++L + L+ PVR+ +
Sbjct: 322 QDLIQLSLQKPVRIMI 337
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 228 (85.3 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 46/136 (33%), Positives = 87/136 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q+Y + + ++ L VGG+ ++ ++++ +++I TPGRL
Sbjct: 203 IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTR-PDIVIATPGRL 261
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRR-TGLFSATQTEAV 121
D + +++++LV+DEADR+L+ GFQ +++ I+S +PK +R T LFSAT +
Sbjct: 262 IDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSATMNTRI 321
Query: 122 EELSKAGLRNPVRVEV 137
++L + L+ PVR+ +
Sbjct: 322 QDLIQLSLQKPVRIMI 337
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 227 (85.0 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 53/150 (35%), Positives = 90/150 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+ ++PTREL+ QI ST+ VK+ +LVGG++ + + ++ ++++G+PGR+
Sbjct: 191 LALAPTRELAYQIADQFNAIGSTI-GVKTCVLVGGIDSMSQSLALAKK-PHVVVGSPGRV 248
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E + R+++ ++DEADRL F+++++ I+ +PK R T LFSAT T V
Sbjct: 249 LHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKVA 308
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
+L +A L NPV+V+V SK V QQ
Sbjct: 309 KLQRASLVNPVKVQVA--SKYQTVDTLLQQ 336
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 228 (85.3 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 47/137 (34%), Positives = 81/137 (59%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ F + V V L GG ++ + + G +++GTPGRL
Sbjct: 78 LVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQ-GPQIVVGTPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R LD L LVLDEAD +L MGF + + I++++P+ +T LFSAT EA+
Sbjct: 137 LDHLKR-GTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIR 195
Query: 123 ELSKAGLRNPVRVEVRA 139
+++ ++ P V +++
Sbjct: 196 RITRRFMKEPQEVRIQS 212
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 223 (83.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 47/151 (31%), Positives = 88/151 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQIQKVVMA-LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 163 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 221
Query: 123 ELSKAGLRNPVRVEVRAES-KSHHVSASSQQ 152
E++K +R+P+R+ + E + +++ ++
Sbjct: 222 EVTKKFMRDPIRIXLTLEGIRQFYINVEREE 252
>UNIPROTKB|F1S0U0 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:CU326339
Ensembl:ENSSSCT00000006300 Uniprot:F1S0U0
Length = 784
Score = 229 (85.7 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 56/161 (34%), Positives = 90/161 (55%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q + Q + + +L+GG + K++ ++ + G N+LI TPGRL
Sbjct: 266 LILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRK-GINILISTPGRL 324
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL----PKLRRTGLFSATQT 118
D ++ + F + L+LDEADRLLD+GF+K I+ I++ + P+ R+ L SAT T
Sbjct: 325 VDHIKSTKNMRFCRIRWLILDEADRLLDLGFEKDIALILNAVNAERPE-RQNVLLSATLT 383
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
E V L+ L PVR+ V E + S+ + + P
Sbjct: 384 EGVTRLADISLHEPVRISV-LEGSQDQMHPKSRAILGASPP 423
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 224 (83.9 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 52/135 (38%), Positives = 86/135 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ A+ T KS+ + GG + KA + + + G +++I TPGRL
Sbjct: 131 LVLAPTRELALQVE--AECLKYTYKGFKSICIYGGGDRKAQINVVTK-GVDIVIATPGRL 187
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + ++ +++ LVLDEADR+LDMGF+ QI I+ + R+T + SAT + V
Sbjct: 188 NDL-QMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATWPDGVR 246
Query: 123 ELSKAGLRNPVRVEV 137
L+K+ LRNP+ V V
Sbjct: 247 RLAKSYLRNPMIVYV 261
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 226 (84.6 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 51/149 (34%), Positives = 86/149 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q+ + + +P V V + GG + +K I GA +++ TPGRL
Sbjct: 78 LILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRN-GAQIVVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R D + LVLDEAD +L +GF + I +P+ R+T LFSAT +++
Sbjct: 137 CDHLRR-DEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSATLPQSIR 195
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+++ L++P V++ +SK+ V+A Q
Sbjct: 196 AIAERHLKDPKHVKI--QSKTQTVTAIEQ 222
>UNIPROTKB|P54475 [details] [associations]
symbol:cshB "DEAD-box ATP-dependent RNA helicase CshB"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0009409 "response to cold" evidence=IGI]
[GO:0043590 "bacterial nucleoid" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0009409 GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
EMBL:D84432 PIR:D69954 RefSeq:NP_390393.1 ProteinModelPortal:P54475
SMR:P54475 IntAct:P54475 EnsemblBacteria:EBBACT00000001897
GeneID:937908 KEGG:bsu:BSU25140 PATRIC:18976864 GenoList:BSU25140
HOGENOM:HOG000268806 OMA:YAHVEPK ProtClustDB:CLSK2301471
BioCyc:BSUB:BSU25140-MONOMER Uniprot:P54475
Length = 438
Score = 206 (77.6 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 53/161 (32%), Positives = 87/161 (54%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP--DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I +PTREL++QIY A ++S +GG + + + K++ + +L++GTPG
Sbjct: 76 VITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ-PHLVVGTPG 134
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D+++ L E LV+DEAD +LDMGF + YI SR+P+ + +FSAT E
Sbjct: 135 RIADLIKEQ-ALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQMLVFSATIPEK 193
Query: 121 VEELSKAGLRNP--VRVEVR--AESKSHHVSASSQQLASSK 157
++ K + NP VE + +K H+ S+ K
Sbjct: 194 LKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDK 234
Score = 38 (18.4 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 160 LGLHLEYLECEPDE 173
+G+ EYLE E E
Sbjct: 363 MGIEFEYLELEKGE 376
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 50/144 (34%), Positives = 84/144 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ VA + +KS + GG ++ +E G + I TPGRL
Sbjct: 9 LVLAPTRELAQQVQQVAAEYCRACR-LKSTCIYGGAPKGPQIRDLER-GVEICIATPGRL 66
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + R LVLDEADR+LDMGF+ QI I+ ++ R+T ++SAT + V
Sbjct: 67 IDFLE-CGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 125
Query: 123 ELSKAGLRNPVRVEVRA-ESKSHH 145
+L++ L++ + + + A E ++H
Sbjct: 126 QLAEDFLKDYIHINIGALELSANH 149
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 222 (83.2 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 49/138 (35%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI V + L VK+ VGG V+ D +++ + G ++++GTPGR+
Sbjct: 113 LVLAPTRELAQQIEKVMRALGDYL-GVKAQACVGGTSVRED-QRVLQSGVHVVVGTPGRV 170
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L +++ VLDEAD +L GF+ QI I LP + G+FSAT
Sbjct: 171 FDLLRRQS-LRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEAL 229
Query: 123 ELSKAGLRNPVRVEVRAE 140
E+++ + PVR+ V+ +
Sbjct: 230 EITRKFMNKPVRILVKRD 247
>DICTYBASE|DDB_G0293036 [details] [associations]
symbol:ddx5 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0293036 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000155_GR GO:GO:0000184
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 PROSITE:PS51195
EMBL:AAFI02000199 RefSeq:XP_629283.1 ProteinModelPortal:Q54CD6
EnsemblProtists:DDB0266367 GeneID:8629006 KEGG:ddi:DDB_G0293036
OMA:RISIMLL ProtClustDB:CLSZ2846571 Uniprot:Q54CD6
Length = 697
Score = 227 (85.0 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 58/182 (31%), Positives = 105/182 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL Q+ H I+ L +K+ ++ GG+ ++++E+E +LI TPGRL
Sbjct: 295 LVLVPTRELGLQV-HSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRL 353
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++E V D ++ +LVLDEAD++L G Q+ I ++ + LFSAT ++++
Sbjct: 354 IEMIENGHV-DLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLK 412
Query: 123 ELSKAGLRNP-VRVEVRAES--KSHHVSASSQQLASSKTPLGLHLEYLECEPD--EKPSQ 177
E+SK +++P +R+ + + K +H+ +Q +A K P L ++ L EP EK
Sbjct: 413 EVSKDWIKDPSIRLRIGSSELPKLNHIQQDAQLIAHHKKPRAL-IKLLS-EPQFKEKKKT 470
Query: 178 LV 179
+V
Sbjct: 471 IV 472
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 227 (85.0 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 58/153 (37%), Positives = 96/153 (62%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++++PTREL+ QIY A+ F + V+ ++ GG ++ ++ +E G +LL+ TPG
Sbjct: 316 ISLVLAPTRELALQIYDEARKF-AYRSRVRPCVVYGGADIGQQIRDLER-GCHLLVATPG 373
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR---LPK-LRRTGLFSA 115
RL D+MER + LD+ + LVLDEADR+LDMGF+ QI I+ + PK R+T +FSA
Sbjct: 374 RLVDMMERGKIGLDY--CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSA 431
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
T + ++ L++ L + + V R S S +++
Sbjct: 432 TFPKEIQILARDFLEEYIFLAVGRVGSTSENIT 464
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 228 (85.3 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 48/130 (36%), Positives = 78/130 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+SQ A + P + +++GG ++ + ++++ +L+ TPGRL
Sbjct: 462 LVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRL 521
Query: 63 YDIMERMDVLDFR--NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
D +E R +++LVLDEAD LLDMGF++ I II+ +PK R+T LFSAT E
Sbjct: 522 KDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEE 581
Query: 121 VEELSKAGLR 130
V ++ L+
Sbjct: 582 VRQICHVALK 591
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 221 (82.9 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 49/138 (35%), Positives = 84/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI V I +++ +GG V+ D+ + E G +++GTPGR+
Sbjct: 97 LIVAPTRELAQQIQKVVIA-IGDFMNIQCHACIGGTAVRDDMNALRE-GPQIVVGTPGRI 154
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D+++R VL +++ +LDEAD +L GF +QI I LP+ + L SAT + V
Sbjct: 155 HDMIQRR-VLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVL 213
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++ +R+PVR+ V+ +
Sbjct: 214 EVTTKFMRDPVRILVKKQ 231
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 223 (83.6 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 69/228 (30%), Positives = 112/228 (49%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ ++ISPTREL+ QIY F + D++ + GGV K D ++ + A +++ TPG
Sbjct: 148 LAVVISPTRELAMQIYDQLVKFAEKV-DIQVACIFGGV--KKDEQREALKSAAVVVATPG 204
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTE 119
RL D+ + LD ++ LVLDEADR+LD GF++ I IIS +P R+T +F+AT
Sbjct: 205 RLKDL-QNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPP 263
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLV 179
V L+ + +PV V + + S+ A+S+ + + +P EK +LV
Sbjct: 264 IVRNLASTFMTSPVTVTIGGDP-------SADPRANSRIKQVVEV----VKPHEKEQRLV 312
Query: 180 DLLXXXXXXXXXXYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+L C + + RL K + +HG + Q
Sbjct: 313 QILNRHQRGTPDKVLAFCLYKKE-AMRVERLLRTKGFKVAGIHGDLSQ 359
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 63/183 (34%), Positives = 97/183 (53%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G++++PTREL QI+ + F L ++ V + GG V + +++ G +++ TPG
Sbjct: 604 IGLVMAPTRELVQQIHSDIRKFSKPL-GIRCVPVYGGSGVAQQISELKR-GTEIVVCTPG 661
Query: 61 RLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
R+ DI+ + + R + LV+DEADR+ DMGF+ QI+ II + R+T LFSAT
Sbjct: 662 RMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFP 721
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLEC--EPDEKPS 176
VE L++ L PV ++V S V+ QL + L LE E EK
Sbjct: 722 RQVETLARKVLNKPVEIQVGGRSV---VNKDITQLVEVRPESDRFLRLLELLGEWSEKGK 778
Query: 177 QLV 179
LV
Sbjct: 779 ILV 781
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 220 (82.5 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 49/138 (35%), Positives = 85/138 (61%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI V I +++ +GG V+ D+K +++ G +++GTPGR+
Sbjct: 95 LILAPTRELAQQIQKVVVA-IGDFMNIECHACIGGTSVRDDMKALQD-GPQVVVGTPGRV 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D+++R L +++ VLDEAD +L GF +QI I LP+ + L SAT + V
Sbjct: 153 HDMIQRR-FLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVL 211
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++ +R+PVR+ V+ +
Sbjct: 212 EVTTKFMRDPVRILVKKD 229
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 224 (83.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 53/135 (39%), Positives = 79/135 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL QI Q L + + GGV++ + ++ N+++ TPGR+
Sbjct: 228 LVISPTRELCIQISQNFQALGMNLL-INICTIYGGVDIVTQSLNLAKK-PNVIVSTPGRI 285
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +NL+ LV DEAD+LL F+ I+ ++ LP R T LFSAT T+ V
Sbjct: 286 LDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNRITFLFSATMTKNVA 345
Query: 123 ELSKAGLRNPVRVEV 137
+L KA L+NPV+VEV
Sbjct: 346 KLKKACLKNPVKVEV 360
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 224 (83.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 53/135 (39%), Positives = 79/135 (58%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL QI Q L + + GGV++ + ++ N+++ TPGR+
Sbjct: 228 LVISPTRELCIQISQNFQALGMNLL-INICTIYGGVDIVTQSLNLAKK-PNVIVSTPGRI 285
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +NL+ LV DEAD+LL F+ I+ ++ LP R T LFSAT T+ V
Sbjct: 286 LDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNRITFLFSATMTKNVA 345
Query: 123 ELSKAGLRNPVRVEV 137
+L KA L+NPV+VEV
Sbjct: 346 KLKKACLKNPVKVEV 360
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 47/138 (34%), Positives = 83/138 (60%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q +A + +GG V+A+V+K++ E ++++GTPGR+
Sbjct: 104 LVLAPTRELAQQKVVMA---LGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRV 160
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D++ R L + +++ VLDEAD +L GF+ QI I +L + L SAT V
Sbjct: 161 FDMLNRR-YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL 219
Query: 123 ELSKAGLRNPVRVEVRAE 140
E++K +R+P+R+ V+ E
Sbjct: 220 EVTKKFMRDPIRILVKKE 237
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 260 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 318
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 319 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 432
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 260 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 318
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 319 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 432
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 260 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 318
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 319 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 432
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 260 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 318
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 319 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 432
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 260 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 318
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 319 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 376
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 377 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 432
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 220 (82.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/151 (34%), Positives = 87/151 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ Q + ++K V + GG +K + + G ++LI TPGRL
Sbjct: 85 LVLVPTRELAQQVLDSLQAYAKGT-ELKIVAVYGGTSMKVQLNHLRG-GVDILIATPGRL 142
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + L +E+LVLDEADR+LDMGF + ++ RL LR+T FSAT ++
Sbjct: 143 LD-HAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIK 201
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
++ +R+P+ V+V + S+ + + QQ+
Sbjct: 202 AVAYRIMRDPIEVQV---TPSNSTAETVQQM 229
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 220 (82.5 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 52/151 (34%), Positives = 87/151 (57%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ Q + ++K V + GG +K + + G ++LI TPGRL
Sbjct: 85 LVLVPTRELAQQVLDSLQAYAKGT-ELKIVAVYGGTSMKVQLNHLRG-GVDILIATPGRL 142
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + L +E+LVLDEADR+LDMGF + ++ RL LR+T FSAT ++
Sbjct: 143 LD-HAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIK 201
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
++ +R+P+ V+V + S+ + + QQ+
Sbjct: 202 AVAYRIMRDPIEVQV---TPSNSTAETVQQM 229
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 224 (83.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 62/177 (35%), Positives = 97/177 (54%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLL-----VGGVEVKADVKKIEEEGANLLI 56
G+II P+REL+ Q + + + + L + S LL +GG+ VK ++ I G ++++
Sbjct: 278 GLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH-GVHMMV 336
Query: 57 GTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL D++++ V LD L LDEADR++DMGF+ I I S R+T LFSA
Sbjct: 337 ATPGRLMDLLQKKMVSLDI--CRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSA 394
Query: 116 TQTEAVEELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSKTPLGLHLEYLECEP 171
T + ++ +K+ L PV + V RA + S V + + + L LE L+ P
Sbjct: 395 TMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYL-LECLQKTP 450
WARNING: HSPs involving 551 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 220 0.00094 112 3 11 22 0.38 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 801
No. of states in DFA: 591 (63 KB)
Total size of DFA: 150 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.21u 0.10s 19.31t Elapsed: 00:00:00
Total cpu time: 19.25u 0.10s 19.35t Elapsed: 00:00:00
Start: Mon May 20 17:48:55 2013 End: Mon May 20 17:48:55 2013
WARNINGS ISSUED: 2