BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026925
(230 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana
GN=RH18 PE=2 SV=1
Length = 593
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/227 (77%), Positives = 203/227 (89%), Gaps = 4/227 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QIY+VAQPF+STL +V SVLLVGG EVKAD+K IEEEG N+LIGTPG
Sbjct: 92 MGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIMERM++LDFRNLEIL+LDEADRLL+MGFQ+Q++YIISRLPK RRTGLFSATQTE
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEG 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
VEEL+KAGLRNPVRVEVRA+SKS SSQQL +SKTP GLHLEY+ECE D+K SQLVD
Sbjct: 212 VEELAKAGLRNPVRVEVRAKSKSE----SSQQLTNSKTPSGLHLEYMECEADKKSSQLVD 267
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
LLIKN KK+I++FMTCA VDYWG+VL ++ LKS+SLIP+HG MKQ
Sbjct: 268 LLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQ 314
>sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp.
japonica GN=Os01g0164500 PE=1 SV=2
Length = 647
Score = 334 bits (857), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/227 (68%), Positives = 191/227 (84%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELSSQIY+VAQPF +TL V S+LLVGG ++KA++KK+EEEGAN+L+GTPG
Sbjct: 98 LGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPG 157
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+D+MER+D L+++NLEIL+LDEADRLLD+GFQKQI+ IIS+LPKLRRTGLFSATQTEA
Sbjct: 158 KLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEA 217
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
V+EL+KAGLRNPVRVEV+ E K + Q+L SKTPLGL LEY+ CE K SQLVD
Sbjct: 218 VKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEASNKSSQLVD 277
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L++N KKI++YF TCACVDYW +VLP L LK +IP HGKMKQ
Sbjct: 278 FLVQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQ 324
>sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana
GN=RH49 PE=2 SV=2
Length = 558
Score = 318 bits (814), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/229 (67%), Positives = 187/229 (81%), Gaps = 13/229 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+PF+STLP+V SVLLVGG EV+AD+ +EEEGANLLIGTPG
Sbjct: 92 MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
V +L+KAGLRN + V AESK SKT GL+ EYL+CE D+K SQLV
Sbjct: 212 VADLAKAGLRNAMEVISGAESK-------------SKTSSGLYCEYLKCEADQKSSQLVH 258
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVG 229
LLI+NK+KK++++FMTCACVDYWG+VL ++ LKS+S HGKM Q G
Sbjct: 259 LLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKG 307
>sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis thaliana
GN=RH55 PE=2 SV=1
Length = 465
Score = 260 bits (664), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 161/229 (70%), Gaps = 41/229 (17%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+ + EV+AD+ +EEEGANLLIGTPG
Sbjct: 93 MGVIISPTRELSAQIHKVARAVRLDFAKCR--------EVEADMNTLEEEGANLLIGTPG 144
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 145 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 204
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
V +L+KAGLRNP YL+CE D+K SQLV
Sbjct: 205 VADLAKAGLRNP---------------------------------YLKCEADQKSSQLVH 231
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQVG 229
LLI+NK+KK++++FMTCACVDYWG+V+ ++ LKS+S P HGKM Q G
Sbjct: 232 LLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKG 280
>sp|Q6AZV7|DDX55_XENLA ATP-dependent RNA helicase DDX55 OS=Xenopus laevis GN=ddx55 PE=2
SV=1
Length = 594
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 149/231 (64%), Gaps = 15/231 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 85 ALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVDDVRKFKEHGGNIIVATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD + L++L+LDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ +E L +AGLRNPVR+ V K V+A+S Q KTP+ L Y+ C+ DEK +
Sbjct: 205 QTQELENLVRAGLRNPVRIAV----KEKGVAATSTQ----KTPIRLQNYYMICKADEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
+L+ L K K +K +++F TCACV+Y+G L L LK + ++ +HGKMK
Sbjct: 257 KLIAFLQKRKQEKHLVFFSTCACVEYYGKALEML--LKPVKVMCIHGKMKH 305
>sp|Q5ZLN8|DDX55_CHICK ATP-dependent RNA helicase DDX55 OS=Gallus gallus GN=DDX55 PE=2
SV=1
Length = 591
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 151/231 (65%), Gaps = 15/231 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I++ LPK RRTGLFSAT
Sbjct: 145 LEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ VE L +AGLRNPVR+ V K V+A++ Q KTP L Y+ C+ DEK +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAATNTQ----KTPTRLENYYMICKADEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
QLV L ++K +K +++F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 257 QLVHFLRQHKQEKHLVFFSTCACVEYYGKALESL--IKQVKIMCIHGKMKH 305
>sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos taurus GN=DDX55 PE=2 SV=1
Length = 601
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 147/230 (63%), Gaps = 15/230 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP L Y+ C+ DEK +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTPSRLENHYMVCKADEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
QLV L +K +K +++F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 257 QLVHFLRNHKQEKHLVFFSTCACVEYYGKALETL--VKGVKIMCIHGKMK 304
>sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo sapiens GN=DDX55 PE=1 SV=3
Length = 600
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 150/230 (65%), Gaps = 15/230 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP L Y+ C+ DEK +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTPSRLENYYMVCKADEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
QLV L +K +K +++F TCACV+Y+G L L +K + ++ +HGKMK
Sbjct: 257 QLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVL--VKGVKIMCIHGKMK 304
>sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio rerio GN=ddx55 PE=2 SV=2
Length = 593
Score = 196 bits (499), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 152/231 (65%), Gaps = 15/231 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ P +LL+GG DV+K++ +GAN++I TPGR
Sbjct: 85 ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ +E+L +AGLRNPVR+ V K V+ASS Q KTP L Y C +EK +
Sbjct: 205 QTQELEKLVRAGLRNPVRITV----KEKGVAASSVQ----KTPAKLSNYYTMCRAEEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
LV L ++K +K +++F TCACV+Y+G L L +K++S+ +HGKMK
Sbjct: 257 TLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVL--VKNVSIHCIHGKMKH 305
>sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus musculus GN=Ddx55 PE=2 SV=2
Length = 600
Score = 196 bits (499), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 148/230 (64%), Gaps = 15/230 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP L Y+ C+ DEK +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTPSRLENHYMICKADEKFN 256
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMK 226
QLV L + +K +++F TCACV+Y+G L A+LK + ++ +HGKMK
Sbjct: 257 QLVHFLRSRQQEKHLVFFSTCACVEYYGKALE--ALLKKVKILCIHGKMK 304
>sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 homolog OS=Drosophila
melanogaster GN=CG9630 PE=2 SV=1
Length = 613
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 137/235 (58%), Gaps = 24/235 (10%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
++ISPTREL+ QI V F+ L + L+VGG ++ D+ + E +L+ TP
Sbjct: 85 ALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEK 174
ATQT V +L +AGLRNPV V V+ + AS TP L Y EP+ K
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEK-------------ASVNTPARLQNFYRIVEPELK 251
Query: 175 PSQLVDLLIKNKS--KKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L++ L + K++++F TCACV+YW LP L L +++ +HGKMK
Sbjct: 252 FVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPL--LPKRTVLGIHGKMKN 304
>sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium
discoideum GN=ddx55 PE=3 SV=1
Length = 663
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 137/271 (50%), Gaps = 56/271 (20%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDV-------------------------------- 29
+IISPTREL+ QI V F++ L +
Sbjct: 86 SIIISPTRELAIQIQQVLLEFLNDLNRIDDQNDLENIKTLEDELLEEQEEEENEKEEEEI 145
Query: 30 -----------KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERM----DVLDF 74
S+LL+GG ++ D+ + G N+LIGTPGR + + R+ F
Sbjct: 146 EKKKKKKKIEISSLLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKF 205
Query: 75 RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR 134
+ E+L+LDEADRLLDMGF I+ I+ +LPK RRTGLFSATQT V+EL++ G+RNP +
Sbjct: 206 KEFEMLILDEADRLLDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELARTGMRNPFK 265
Query: 135 VEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLLIKNKSK-KIIIY 193
V V + H+ Q P L Y+ +E+ +QLV L+ + K KIIIY
Sbjct: 266 VSVSVK----HIETHEDQ----SIPTTLDNRYMIVPVEERLNQLVHFLLNHIDKNKIIIY 317
Query: 194 FMTCACVDYWGVVLPRLAVLKSLSLIPLHGK 224
F+TC+ VDY+ +L + VL LHGK
Sbjct: 318 FLTCSTVDYFFKILQSVKVLSGKPFFSLHGK 348
>sp|Q1E1R7|SPB4_COCIM ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis (strain
RS) GN=SPB4 PE=3 SV=2
Length = 653
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 135/256 (52%), Gaps = 42/256 (16%)
Query: 2 GMIISPTRELSSQIYHV--------------AQPFIS--------TLPDVKSV------- 32
+I+SPTREL+ QIY V QP S TLP S
Sbjct: 93 AIIVSPTRELAEQIYKVLLSLLAFHAPSAAAIQPSTSDETADGETTLPSYPSSTLKVVPQ 152
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NL + TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 153 LLLGGATTPAQDLSTFLKRSPNLFVSTPGRLLELLSSPHVHCPQTSFEVLVLDEADRLLD 212
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
+GF+ + ++RLPK RRTGLFSAT ++AV+++ + GLRNPV++ V+ + +
Sbjct: 213 LGFKDDLQKTLARLPKQRRTGLFSATVSDAVDQIIRVGLRNPVKIAVKVK--------GA 264
Query: 151 QQLASSKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLP 208
+TP L + YL P K + +L I N +K I+YF TCA VDYW VLP
Sbjct: 265 PGTEEKRTPASLQMTYLLTRPSHKIPAIRQILNSIDNTPQKTILYFSTCAAVDYWSHVLP 324
Query: 209 RLAVLKSLSLIPLHGK 224
L + + +PLHGK
Sbjct: 325 SL-LPEIFVTLPLHGK 339
>sp|Q0UP45|SPB4_PHANO ATP-dependent rRNA helicase SPB4 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=SPB4 PE=3 SV=1
Length = 633
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 141/258 (54%), Gaps = 40/258 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--------------------------------TLPDV 29
+IISPTREL++QI+ V + TL V
Sbjct: 87 AIIISPTRELATQIHTVLSSLLKFHAPSAAMLEPDDEDTDMEDADTPPKPTFPPGTLKAV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ ++ N+LIGTPGRL +++ V + + LV+DEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSAFLKKSPNILIGTPGRLLELLRSPHVHCPQSSFDALVMDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
LD+GF++ + IISRLPK RRTGLFSA+ +EAV++L + GLRNPVR+ V+ ++++ +
Sbjct: 207 LDLGFKEDLQKIISRLPKQRRTGLFSASMSEAVDQLIRVGLRNPVRIAVKVKARA---TG 263
Query: 149 SSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVV 206
++ +TP L + YL P K + +L ++ + +K I+Y TC VDY+ V
Sbjct: 264 EDGKIEDKRTPASLQMSYLVTPPSHKIPAMKKILSSLQPQPQKSILYLSTCFSVDYFQHV 323
Query: 207 LPRLAVLKSLSLIPLHGK 224
LP VL+ ++PLHGK
Sbjct: 324 LPE--VLQGYDIVPLHGK 339
>sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=SPB4 PE=3 SV=2
Length = 617
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 137/234 (58%), Gaps = 21/234 (8%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
+ +++SPTREL+SQI V I LP+ +K+ LLVG + V+ D+ + ++ ++L
Sbjct: 95 LAIVLSPTRELASQIQSVFNNVIEYLPEDKIPIKTQLLVGSLSTVRDDLDRFLKDKPHIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
I TPGR+ D M V ++EI +LDEAD+LLD F+K + I+ RLPK RRTGLFSA
Sbjct: 155 IATPGRMLDFMSSQYV-KMNSVEIAILDEADKLLDFSFEKDVVNILKRLPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T + A + +AG+ NPV+V V+++S + ++ P LH+ YL EP++K
Sbjct: 214 TISAAGNTIFRAGMNNPVKVAVKSKSTT-----------ANSAPSALHISYLMIEPEKKI 262
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLA----VLKSLSLIPLHGKM 225
+ L+ LL + KK I+YF TC V ++ + ++ +S LHG++
Sbjct: 263 TTLIKLLHDYRYKKCIVYFPTCTSVKHFYSIFQKIVNGNDNTESFKFYSLHGQL 316
>sp|Q4P9E5|SPB4_USTMA ATP-dependent rRNA helicase SPB4 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SPB4 PE=3 SV=2
Length = 767
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 149/288 (51%), Gaps = 69/288 (23%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS-------------------------------TLPDVK 30
+I+SPTREL+ QIY V F+ T PD
Sbjct: 104 ALIVSPTRELAEQIYKVLVMFLDAQNHAHVQAQQQQDQDEQDEQDEQEAQSDSDTDPDAS 163
Query: 31 SVL----------------------LVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIM 66
+ L +VGG + D +++ + GA++L+GTPGRL +++
Sbjct: 164 TALNNKRKSSNHLVARKNMISGAQLVVGGSKCTPLDDYRQLRDSGADILVGTPGRLEELL 223
Query: 67 ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSK 126
+ V +LE+LVLDEADRLLD+GF + + I+S LPK RRTGLFSAT T+A+ EL +
Sbjct: 224 SKKGVKK-SSLEVLVLDEADRLLDLGFTENLRRILSLLPKQRRTGLFSATMTDALSELVR 282
Query: 127 AGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL---- 182
GLRNPVRV V+ E+K H S+S S +TP L Y C K +QL ++
Sbjct: 283 IGLRNPVRVVVKVEAK-HKTSSSIDD--SRRTPATLQNLYQLCRAQNKLAQLARIVLFES 339
Query: 183 ----IKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKS--LSLIPLHGK 224
I ++K+I+YF TCA V+Y+ V ++++L+ + L LHGK
Sbjct: 340 SQNAISGGARKLIVYFSTCAQVNYFYSVFSQVSILRQHRVKLYALHGK 387
>sp|Q4HVW2|SPB4_GIBZE ATP-dependent rRNA helicase SPB4 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SPB4 PE=3
SV=1
Length = 637
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 141/250 (56%), Gaps = 35/250 (14%)
Query: 2 GMIISPTRELSSQIYHV-----------------------AQPFISTLPDVKSVLLVGGV 38
+I+SPTREL++QI+ V +PF +T+P + LLVGG
Sbjct: 90 AIIVSPTRELAAQIHTVLMKLLQFHEASAEILPHLKDDDEKRPF-TTVPAIVPQLLVGGT 148
Query: 39 EVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQ 96
D++ N+LI +PGRL ++M V + E+LVLDEADRLLD+GF+
Sbjct: 149 TTTVQDLRFFLRHSPNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDLGFKPD 208
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
+ I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L
Sbjct: 209 LQKILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKIKGGGI------LEDR 262
Query: 157 KTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVLK 214
KTP L + Y+ +K L +LL + + ++ I++ TCA VDY+ +LP L + +
Sbjct: 263 KTPASLQMTYMVKPASQKLPALAELLRQLPVRPQRSIVFLSTCAAVDYFQHILP-LILPE 321
Query: 215 SLSLIPLHGK 224
+L+PLHGK
Sbjct: 322 GFALVPLHGK 331
>sp|A5DGM4|SPB4_PICGU ATP-dependent rRNA helicase SPB4 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=SPB4 PE=3 SV=2
Length = 601
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 133/232 (57%), Gaps = 25/232 (10%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLLI 56
G++ISPTREL++QI V + P+ +K+ L+VG + V+ D+ E ++I
Sbjct: 91 GIVISPTRELANQINTVFHTLLQFYPEDQPPIKTQLIVGSLATVREDLNAFAENKPQIII 150
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D + + +E++VLDEADRLLD+ FQ + I+ +LPK RRTGLFSAT
Sbjct: 151 ATPGRLLDFFSS-NAVKRSTVEMVVLDEADRLLDISFQNDVVSILKKLPKQRRTGLFSAT 209
Query: 117 QTEAVEELSKAGLRNPVRVEV---RAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDE 173
+ A + + + G+ NPV++ V +AESK P L + Y+ P+
Sbjct: 210 LSSAGDSIFRTGMSNPVKISVNSNKAESK----------------PQSLTVNYMMVNPET 253
Query: 174 KPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKM 225
K + L+++L + KK I+YF TCA V Y+ V +L L+ ++L +HG++
Sbjct: 254 KIAVLINMLSTLQYKKCIVYFPTCASVKYFYSVFQKLHPLEDVNLTSIHGQL 305
>sp|Q750F8|SPB4_ASHGO ATP-dependent rRNA helicase SPB4 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SPB4
PE=3 SV=2
Length = 599
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 131/233 (56%), Gaps = 26/233 (11%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLLI 56
+IISPTREL+SQI V + F++ PD +KS LL+G V+ DV E +L+
Sbjct: 87 IIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAFLEHRPQILV 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGRL D + +M + + +LDEAD+LLDM F+K + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRLLDFL-KMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKMLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPS 176
+ A ++ K G+RNPV+V V+ S+K P L + Y+ EP K
Sbjct: 206 VSSAGTQVFKTGMRNPVKVSVK---------------TSNKAPSSLDINYIVIEPRMKLQ 250
Query: 177 QLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVL----KSLSLIPLHGKM 225
L+ LL + KK I+Y TC V Y+ +L LA L ++L L LHGK+
Sbjct: 251 LLLTLLNNYRYKKCIVYLPTCIAVTYFYSILQHLAKLNKMDENLKLYSLHGKL 303
>sp|A2QE29|SPB4_ASPNC ATP-dependent rRNA helicase spb4 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=spb4 PE=3 SV=2
Length = 642
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 135/252 (53%), Gaps = 38/252 (15%)
Query: 2 GMIISPTRELSSQIYHV-------------------------AQPFISTLPDVKSVLLVG 36
+IISPTREL+SQIY+V Q F S+ V LL+G
Sbjct: 90 AIIISPTRELASQIYNVLTSLLAFHPPSASTLKPSDDDDDAPRQKFPSSTLKVVPQLLLG 149
Query: 37 GVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQ 94
G A D+ + NLL+ TPGRL +++ V + E+LV+DEADRLLD+GF+
Sbjct: 150 GSTTPAEDLSTFLKRSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVMDEADRLLDLGFK 209
Query: 95 KQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLA 154
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S +
Sbjct: 210 DTLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGTS--------GVQ 261
Query: 155 SSKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAV 212
+TP L + YL P K + +L ++ +K I++ TC+ VDY +LP + +
Sbjct: 262 DKRTPASLQMTYLTAPPTHKFPAIKHILYSLEPAPQKTIMFVSTCSGVDYLSAILPSI-I 320
Query: 213 LKSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 GDDFQLIPLHGK 332
>sp|Q2UBZ5|SPB4_ASPOR ATP-dependent rRNA helicase spb4 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=spb4 PE=3 SV=1
Length = 638
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 133/251 (52%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHV------------------------AQPFISTLPDVKSVLLVGG 37
+IISPTREL+SQIYHV Q F S+ V LL+GG
Sbjct: 90 AIIISPTRELASQIYHVLLSLLAFHPPSASVINPSEDDDVPRQKFPSSTLKVVPQLLLGG 149
Query: 38 VEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
A D+ K ++ NLL+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSKFLKQSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ II RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNIIRRLPKQRRTGLFSASISEAVDQIVRVGLRNPVKVMVKVKGTS--------GAQD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL K L +L + +K I + TC+ VDY +LP L +
Sbjct: 262 KRTPASLQMTYLTTPTIHKFDALKHILHSVDPTPQKTIFFASTCSGVDYLSAILP-LILG 320
Query: 214 KSLSLIPLHGK 224
LI LHGK
Sbjct: 321 DDFQLISLHGK 331
>sp|A1CL59|SPB4_ASPCL ATP-dependent rRNA helicase spb4 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=spb4 PE=3 SV=1
Length = 639
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 136/251 (54%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQI+ V Q + STL V +LL G
Sbjct: 90 AIIISPTRELASQIHSVMQSLLAFHPPSAAAMTPLDDDDAPRQKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSRFLKLSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ + S +
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKIMVKVKGTS--------GVDD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL P K + L ++L ++ +K I + TC+ VDY +LP L +
Sbjct: 262 KRTPASLQMTYLSTPPLHKFAALKNILSSVQPTPQKSIFFVSTCSGVDYLSAILP-LLLG 320
Query: 214 KSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 DDFLLIPLHGK 331
>sp|A1D699|SPB4_NEOFI ATP-dependent rRNA helicase spb4 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=spb4
PE=3 SV=1
Length = 640
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 133/251 (52%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQIY+V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S +
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGS--------GVDD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL P K + L +L ++ K I + TC+ VDY +LP L +
Sbjct: 262 KRTPASLQMTYLTTPPSHKFAALKRILSSVQPTPLKTIFFVSTCSGVDYLSAILP-LLLG 320
Query: 214 KSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 DDFLLIPLHGK 331
>sp|Q4WYJ7|SPB4_ASPFU ATP-dependent rRNA helicase spb4 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=spb4
PE=3 SV=2
Length = 640
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 133/251 (52%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQIY+V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S +
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGSG--------VDD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL P K + L ++ ++ K I + TC+ VDY +LP L +
Sbjct: 262 KRTPASLQMTYLTTPPSHKFAALKRIVSSVQPTPLKTIFFVSTCSGVDYLSAILP-LLLG 320
Query: 214 KSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 DDFLLIPLHGK 331
>sp|P34640|DDX55_CAEEL Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis
elegans GN=ZK512.2 PE=3 SV=2
Length = 578
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 125/226 (55%), Gaps = 19/226 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SP+REL SQI V QPF L ++ + GG +V ++K + + N+L+ TPGR
Sbjct: 83 ALILSPSRELCSQIVSVIQPFAEKL-NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGR 141
Query: 62 LYDIMERMDVL---DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
L+ I++ L R L++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 142 LFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQV 201
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQL 178
+ ++L GLRN +V+V E +S P L Y+EC DEK S
Sbjct: 202 KEEDDLMVFGLRNAKQVKVAQER-------------NSAAPSTLKNYYVECRADEKTSVC 248
Query: 179 VDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGK 224
++ + + KKI+I+F +C V Y+ + R L L +HGK
Sbjct: 249 LEFIRQRTDKKILIFFPSCNSVRYFYKIFER--CLGKRPLFAVHGK 292
>sp|A6RMZ2|SPB4_BOTFB ATP-dependent rRNA helicase spb4 OS=Botryotinia fuckeliana (strain
B05.10) GN=spb4 PE=3 SV=1
Length = 626
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 132/249 (53%), Gaps = 37/249 (14%)
Query: 2 GMIISPTRELSSQIYHVA--------------QPF--------ISTLPDVKSVLLVGGVE 39
+I+SPTREL++QI+ V QP STL + +LL G
Sbjct: 90 AIIVSPTRELATQIHSVLTSLLKFHEPSAEALQPLEEGEKRKPSSTLRVIPQLLLGGTTT 149
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 PAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 209
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+ RLPK RRTGLFSA+ +EAV E+ + GLRNPV++ V+ + T
Sbjct: 210 KILGRLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKGAGG---------GDKMT 260
Query: 159 PLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL-KS 215
P L + YL P K L+ LL ++ +K IIY TCA VDY+ +L AVL K
Sbjct: 261 PASLQMSYLLTPPTHKFPALLSLLSQLEPTPQKSIIYLSTCAAVDYFQPLLE--AVLPKQ 318
Query: 216 LSLIPLHGK 224
L+ LHGK
Sbjct: 319 FGLVSLHGK 327
>sp|Q0CQF3|SPB4_ASPTN ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=spb4 PE=3 SV=1
Length = 639
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 132/251 (52%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQI+ V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIHQVLLSLLAFHPPSAAAIKPPGEDDAPREKFSASTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+LI TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSYFLKHSPNVLISTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S +
Sbjct: 210 TLQNILRRLPKQRRTGLFSASISEAVDQIVRVGLRNPVKVLVKVKGTS--------GVQD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL P K L +L ++ +K I + TC+ VDY +LP L +
Sbjct: 262 KRTPASLQMTYLTTPPAHKFLTLRPILTSLQPTPQKTIFFVSTCSGVDYLAAILP-LLLG 320
Query: 214 KSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 DDFQLIPLHGK 331
>sp|O74764|SPB4_SCHPO ATP-dependent rRNA helicase spb4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spb4 PE=3 SV=1
Length = 606
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 24/235 (10%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--------VKSVLLVGGVEVKADVKKIEEEGAN 53
+I++PTREL++QI++V + ++ PD V + + G + D+ E+ +
Sbjct: 75 ALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFREKNPS 134
Query: 54 LLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 113
++IGTPGRL +++ + ++LEIL+LDEAD L+DMGFQ+ + IIS+LPK RRTGLF
Sbjct: 135 VVIGTPGRLNEMLSHISS---KHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLF 191
Query: 114 SATQTEAVEELSK-AGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPD 172
SAT + V K AGLRN VRV V SK ++TP L ++ L P
Sbjct: 192 SATMNDTVSSFLKIAGLRNSVRVSVTVTSKK----------IDTRTPSSLAIQSLVIPPI 241
Query: 173 EKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
K ++ LL + +K I++F +CA V+Y+ + L ++ LHG+ Q
Sbjct: 242 YKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLF--LTYKLPFEIVALHGQQVQ 294
>sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=HAS1 PE=3 SV=1
Length = 568
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 136/227 (59%), Gaps = 21/227 (9%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG + + +K+ + G NLLI TPGRL
Sbjct: 180 VVVSPTRELALQIFGVARELMAHHSQTFGIV-IGGANRRQEAEKLMK-GVNLLIATPGRL 237
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F+N++ LV+DEADR+L++GF++++ II LP R++ LFSATQT V
Sbjct: 238 LDHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILPNEDRQSMLFSATQTTKV 297
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ LR P+ + V +ES++ V+ GL Y+ CE D++ L
Sbjct: 298 EDLARISLRPGPLYINVASESEASTVA-------------GLEQGYVVCESDKRFLLLFS 344
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++ +C CV Y+G +L + L ++ LHGK KQ
Sbjct: 345 FLKRNVKKKIIVFLSSCNCVKYFGELLNYI----DLPVLDLHGKQKQ 387
>sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPB4 PE=1 SV=1
Length = 606
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 123/235 (52%), Gaps = 26/235 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T A ++ K GLRNPVR+ V +++++ P L L Y P EK
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA---------------PSSLKLNYCVVNPAEKL 249
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLA----VLKSLSLIPLHGKMK 226
LV +L K KK I+YF TC V Y+ + L ++ + + LHGK++
Sbjct: 250 QLLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQ 304
>sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SPB4 PE=3 SV=1
Length = 606
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 123/235 (52%), Gaps = 26/235 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T A ++ K GLRNPVR+ V +++++ P L L Y P EK
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA---------------PSSLKLNYCVVNPAEKL 249
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLA----VLKSLSLIPLHGKMK 226
LV +L K KK I+YF TC V Y+ + L ++ + + LHGK++
Sbjct: 250 QLLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQ 304
>sp|Q59N29|SPB41_CANAL ATP-dependent rRNA helicase SPB41 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPB41 PE=3 SV=1
Length = 631
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 135/235 (57%), Gaps = 19/235 (8%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ + + LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEK 174
AT + A + + G+ NPV+V+V+ SK++ S+ +P L L Y+ P+ K
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVK--SKNYFGEQSN-------SPKSLQLSYMMINPELK 265
Query: 175 PSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKS----LSLIPLHGKM 225
+ L+ +L K + KK I+YF TC V ++ + ++ +S L LHG++
Sbjct: 266 ITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQL 320
>sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPB42 PE=3 SV=1
Length = 631
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 135/235 (57%), Gaps = 19/235 (8%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ + + LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEK 174
AT + A + + G+ NPV+V+V+ SK++ S+ +P L L Y+ P+ K
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVK--SKNYFGEQSN-------SPKSLQLSYMMINPELK 265
Query: 175 PSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKS----LSLIPLHGKM 225
+ L+ +L K + KK I+YF TC V ++ + ++ +S L LHG++
Sbjct: 266 ITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQL 320
>sp|A6R918|SPB4_AJECN ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=SPB4 PE=3 SV=2
Length = 676
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 44/257 (17%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 97 AILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASSYPPSTLKIVP 156
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 157 QLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 216
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSAS 149
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ +
Sbjct: 217 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVKVKGAG------ 270
Query: 150 SQQLASSKTPLGLHLEYLECEPDEK-PS-QLVDLLIKNKSKKIIIYFMTCACVDYWGVVL 207
L +TP L + YL P K P+ + + + ++ I+YF TCA VDY+ +L
Sbjct: 271 ---LEDKRTPASLQMTYLLTPPTHKLPAVKYIVSTLSPTPQRSILYFSTCAAVDYYQHIL 327
Query: 208 PRLAVLKSLSLIPLHGK 224
P + + + IPLHGK
Sbjct: 328 PCI-LPDRFTTIPLHGK 343
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS)
GN=HAS1 PE=3 SV=1
Length = 604
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 133/226 (58%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 200 IVVSPTRELALQIFGVARELMAHHSQTYGIV-IGGANRRAEAEKLTK-GVNLLIATPGRL 257
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ D F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 258 LDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILPSEDRQTMLFSATQTTKV 317
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ C+ D++ L
Sbjct: 318 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICDSDKRFLLLFSF 365
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 366 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLDLHGKQKQ 407
>sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=has1
PE=3 SV=1
Length = 609
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 131/226 (57%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 204 IVVSPTRELALQIFGVARELLTAHSQTYGIV-IGGANRRAEAEKLTK-GVNLLIATPGRL 261
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ II LP R+T LFSATQT V
Sbjct: 262 LDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQTTKV 321
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ CE D++ L
Sbjct: 322 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICEADKRFLLLFSF 369
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 370 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLDLHGKQKQ 411
>sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=HAS1 PE=3
SV=2
Length = 591
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 133/227 (58%), Gaps = 22/227 (9%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 191 IVVSPTRELALQIFGVARELMAHHSQTYGIV-IGGANRRAEAEKLAK-GVNLLIATPGRL 248
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ + F+NL+ LV+DEADR+L++GF+ ++ II LPK R+T LFSATQT V
Sbjct: 249 LDHLQNTPFV-FKNLKSLVIDEADRILEIGFEDEMRQIIKVLPKEDRQTMLFSATQTTKV 307
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVD 180
E+L++ LR P+ + V E + V GL Y+ CE D + L
Sbjct: 308 EDLARISLRPGPLYINVDEEKQYSTVE-------------GLEQGYIICETDMRFLLLFS 354
Query: 181 LLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +CACV Y +L + L ++ LHGK KQ
Sbjct: 355 FLKRNLKKKIIVFFSSCACVKYHAELLNYI----DLPVLDLHGKQKQ 397
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 137/226 (60%), Gaps = 20/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QIY VA+ ++ ++ +GG + + +K+ + G NLL+ TPGRL
Sbjct: 207 IVVSPTRELALQIYGVARDLMANHSQTLGIV-IGGNNRRQEEEKLNK-GVNLLVCTPGRL 264
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL+ L++DEADR+L++GF++++ II LPK R++ LFSATQT VE
Sbjct: 265 LDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILPKERQSMLFSATQTTKVE 324
Query: 123 ELSKAGL-RNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ L + P+ + V H+VS++++ GL Y+ C+ D++ L
Sbjct: 325 DLARISLKKGPLYLNV----DEHNVSSTAE---------GLEQGYVVCDSDKRFLLLFSF 371
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++ +C V ++G +L + L ++ LHGK KQ
Sbjct: 372 LKRNAGKKIIVFLSSCNSVKFYGELLNYI----DLPVLDLHGKQKQ 413
>sp|A5E2I8|SPB4_LODEL ATP-dependent rRNA helicase SPB4 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SPB4 PE=3 SV=1
Length = 637
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 135/240 (56%), Gaps = 25/240 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-------VKSVLLVGGV-EVKADVKKIEEEGA 52
+ ++++PTREL+ QI V + LP+ +K+ LLVG + V+ D+ +E
Sbjct: 95 LAIVMAPTRELAKQIQMVFDKVLELLPEEDSYEPRIKTQLLVGFLGNVREDLDSYQENRP 154
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
+LI TPGRL D M + ++ +LEI++LDEAD+LLDM F+ + I+ LPK RRTGL
Sbjct: 155 QILIATPGRLLDFMS-LQIVKTSSLEIVILDEADKLLDMSFETDVIKILKMLPKQRRTGL 213
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPD 172
FSAT + A + + + G+ NPV+++V+ ++ + P L L Y+ EP+
Sbjct: 214 FSATISAAGDTIFRTGMNNPVKLQVKTKNFLGE---------QNNAPTSLQLSYMMIEPE 264
Query: 173 EKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAV-------LKSLSLIPLHGKM 225
K + ++ +L N+ KK I+YF TC V ++ +L +L + +L LHG++
Sbjct: 265 HKLTTMLQMLRDNQFKKAIVYFPTCTSVKHFYQMLSKLCKSSANDIDISALLFFSLHGQL 324
>sp|Q6FKS8|SPB4_CANGA ATP-dependent rRNA helicase SPB4 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SPB4 PE=3 SV=1
Length = 617
Score = 137 bits (345), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 26/235 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+I++PTRELS QI +V F+ P+ ++S L+VG E V+ DV + +E +L
Sbjct: 86 SLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDDVNTLLDERPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ V + ++VLDEADRLLD+ F K + I++ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQSPSV-KTSSCGMVVLDEADRLLDVSFFKDVEKILNVLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T + A + K GLRNPV++ V ++ K+ P L+L Y +P+EK
Sbjct: 205 TISSAGTLIFKTGLRNPVKITVNSQGKN--------------APTTLNLFYSVMKPEEKL 250
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRL-----AVLKSLSLIPLHGKM 225
L+ ++ + KK I+YF TC V ++ L L + + L +I +HGK+
Sbjct: 251 QNLIHIMNNIRFKKCIVYFSTCVSVTFFYQYLKYLQQTDKTLREDLQVISIHGKL 305
>sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=has1 PE=3 SV=1
Length = 606
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 132/226 (58%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 201 LVVSPTRELALQIFGVARELMAHHSQTYGIV-IGGANRRAEAEKLTK-GVNLLIATPGRL 258
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 259 LDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKV 318
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ CE D++ L
Sbjct: 319 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICEADKRFLLLFSF 366
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 367 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLELHGKQKQ 408
>sp|A7F2S3|SPB4_SCLS1 ATP-dependent rRNA helicase spb4 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=spb4 PE=3 SV=1
Length = 625
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 132/249 (53%), Gaps = 38/249 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI----------------------STLPDVKSVLLVGGVE 39
+I+SPTREL++QI+ V + STL V +LL G
Sbjct: 90 AIIVSPTRELATQIHSVLTSLLAFHEPSAGALKPLEEGEKRKPSSTLRVVSQLLLGGTTT 149
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 PAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 209
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+SRLPK RRTGLFSA+ +EAV E+ + GLRNPV++ V+ + T
Sbjct: 210 KILSRLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKGAG----------GDKMT 259
Query: 159 PLGLHLEYLECEPDEK-PSQLVDLLIKNKS-KKIIIYFMTCACVDYWGVVLPRLAVL-KS 215
P L + YL P K P+ L L + +K IIY TCA VDY+ +L AVL K
Sbjct: 260 PASLQMSYLLTPPTHKFPALLSLLSQLQPTPQKSIIYLSTCAAVDYFQPLLE--AVLPKQ 317
Query: 216 LSLIPLHGK 224
+L+ LHGK
Sbjct: 318 FALVSLHGK 326
>sp|Q5B8F4|SPB4_EMENI ATP-dependent rRNA helicase spb4 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=spb4 PE=3 SV=1
Length = 638
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 135/251 (53%), Gaps = 37/251 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV------------------------LLVGG 37
+I+SPTREL+SQIY+V ++ P +V LL+GG
Sbjct: 90 AIIVSPTRELASQIYNVLTSLLAFHPASAAVINTSETEDVPRPKHSSSVLRVVPQLLLGG 149
Query: 38 VEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDVL-DFRNLEILVLDEADRLLDMGFQK 95
A D+ + NLL+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STSPAEDLSTFLKRSPNLLVATPGRLLELLSSPHVYCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S +
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVVVKVKGAS--------GVDD 261
Query: 156 SKTPLGLHLEYLECEPDEKPSQLVDLL--IKNKSKKIIIYFMTCACVDYWGVVLPRLAVL 213
+TP L + YL P K L +L ++ K I + TC+ VDY V+LP L +
Sbjct: 262 KRTPASLQMTYLTQPPTGKFPALKHILNSVQPTPSKSIFFVSTCSGVDYLSVILP-LILG 320
Query: 214 KSLSLIPLHGK 224
LIPLHGK
Sbjct: 321 NDFQLIPLHGK 331
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 21/226 (9%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ + ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 188 IVVSPTRELALQIFGVARDLMKHHSQTYGIV-IGGANRRAEAEKLSK-GVNLLIATPGRL 245
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + F+NL LV+DEADR+L++GF+ ++ II LPK R++ LFSATQT VE
Sbjct: 246 LDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKERQSMLFSATQTTKVE 304
Query: 123 ELSKAGLR-NPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
+L++ LR P+ + V E + V GL Y+ CE D++ L
Sbjct: 305 DLARVSLRPGPLYLNVDEEKEYSTVE-------------GLEQGYVVCEADKRFILLFSF 351
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L K K KKII++F +C V Y+ +L + ++ LHGK KQ
Sbjct: 352 LQKMKKKKIIVFFSSCNSVKYYAELLNYI----DCQVLDLHGKQKQ 393
>sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=has1 PE=3 SV=1
Length = 625
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 130/226 (57%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 219 LVVSPTRELALQIFGVARELCQHHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRL 276
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 277 LDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKV 336
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ CE D++ L
Sbjct: 337 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICEADKRFLLLFSF 384
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 385 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLELHGKQKQ 426
>sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=has1
PE=3 SV=2
Length = 622
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 130/226 (57%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRL 273
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 274 LDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKV 333
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ CE D++ L
Sbjct: 334 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICEADKRFLLLFSF 381
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 382 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLELHGKQKQ 423
>sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SPB4 PE=3 SV=1
Length = 596
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 129/235 (54%), Gaps = 26/235 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVG--GVEVKADVKKIEEEGANLL 55
+IISPTREL+SQI+ V + F+ PD ++S LLVG V+ D+ + +L
Sbjct: 86 SLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRDDINSFTDNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D +++ +V + +VLDEAD+LLD+ FQK + I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRVLDFLQKTNV-KTASCGTVVLDEADKLLDLNFQKDVETILKMLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T A ++ K G+RNPV+V V++ S + + + Y+ P +K
Sbjct: 205 TIESAGAQIFKTGMRNPVKVAVKSNSSAPSSLS---------------INYIVIPPKDKL 249
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLK----SLSLIPLHGKMK 226
L+ LL + KK I+YF TC V Y+ + L L L L LHGK++
Sbjct: 250 QLLLTLLNNYRFKKCIVYFPTCISVTYFYAFINHLKELNLIQDDLKLFSLHGKLQ 304
>sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1
PE=3 SV=1
Length = 622
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 130/226 (57%), Gaps = 19/226 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 216 IVVSPTRELALQIFGVARELCQYHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRL 273
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LP + R+T LFSATQT V
Sbjct: 274 LDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPSEERQTMLFSATQTTKV 333
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDL 181
E+L++ LR P + + + + H + GL Y+ CE D++ L
Sbjct: 334 EDLARISLR-PGPLYINVDHRKEHSTVE-----------GLEQGYVICEADKRFLLLFSF 381
Query: 182 LIKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQ 227
L +N KKII++F +C CV Y +L + L ++ LHGK KQ
Sbjct: 382 LKRNLKKKIIVFFSSCNCVKYHAELLNYI----DLPVLELHGKQKQ 423
>sp|Q80Y44|DDX10_MOUSE Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus GN=Ddx10
PE=1 SV=2
Length = 875
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 129/226 (57%), Gaps = 18/226 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKPSQLVDLL 182
+L++ L++P V V ++K TP L Y+ CE +K S L L
Sbjct: 262 DLARLSLKDPEYVWVHEKAK-------------YSTPATLEQNYIICELHQKISVLFSFL 308
Query: 183 IKNKSKKIIIYFMTCACVDYWGVVLPRLAVLKSLSLIPLHGKMKQV 228
+ KK I++F +C V Y V RL +S++ LHG+ +Q+
Sbjct: 309 RSHLKKKSIVFFSSCKEVQYLYRVFCRLR--PGISILALHGRQQQM 352
>sp|A7TJS7|SPB4_VANPO ATP-dependent rRNA helicase SPB4 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=SPB4 PE=3 SV=1
Length = 607
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 26/235 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGV--EVKADVKKIEEEGANLL 55
+I+SPT+EL+ QI+ V + F+ P+ ++S LLVG V+ DV E +L
Sbjct: 86 SLIVSPTKELAKQIHSVFESFLEHYPENLYPIRSQLLVGTNVKTVRDDVSDFMENKPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D + ++ + +++LDEADRLLD+ F K + I++ LPK RRTGLFSA
Sbjct: 146 IGTPGRILDFL-KIPSVKTSMCSMVILDEADRLLDVSFLKDMENIMNILPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEYLECEPDEKP 175
T T A + + K GLRNPV+V V ++S++ P L ++ E D+K
Sbjct: 205 TITSAGDNIFKTGLRNPVKVTVNSKSQA---------------PSSLKIDCAVVETDKKL 249
Query: 176 SQLVDLLIKNKSKKIIIYFMTCACVDYW----GVVLPRLAVLKSLSLIPLHGKMK 226
Q++ ++ K KK I YF TC V Y+ +L + + + + + LHGK++
Sbjct: 250 EQVISIINNYKFKKCIAYFPTCHSVTYFYSFMQYLLKKGIIKEEIQIYSLHGKLQ 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,009,363
Number of Sequences: 539616
Number of extensions: 2999477
Number of successful extensions: 13263
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 9948
Number of HSP's gapped (non-prelim): 1254
length of query: 230
length of database: 191,569,459
effective HSP length: 114
effective length of query: 116
effective length of database: 130,053,235
effective search space: 15086175260
effective search space used: 15086175260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)