Query 026934
Match_columns 230
No_of_seqs 107 out of 1210
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 02:40:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0406 Glutathione S-transfer 100.0 4.3E-42 9.3E-47 264.3 24.9 219 5-227 8-228 (231)
2 PRK09481 sspA stringent starva 100.0 1.2E-38 2.7E-43 249.8 22.1 196 5-212 9-204 (211)
3 PLN02473 glutathione S-transfe 100.0 5.7E-35 1.2E-39 229.6 18.3 193 7-209 3-210 (214)
4 PRK15113 glutathione S-transfe 100.0 3.9E-34 8.5E-39 224.8 18.7 193 5-212 4-210 (214)
5 TIGR01262 maiA maleylacetoacet 100.0 8.2E-34 1.8E-38 222.3 18.2 192 8-211 1-205 (210)
6 PRK10542 glutathionine S-trans 100.0 4.5E-34 9.7E-39 222.4 16.2 189 7-210 1-197 (201)
7 PLN02395 glutathione S-transfe 100.0 1.3E-33 2.8E-38 222.0 18.6 193 7-210 3-210 (215)
8 PRK10357 putative glutathione 100.0 2.5E-33 5.3E-38 218.4 19.9 192 7-210 1-200 (202)
9 TIGR00862 O-ClC intracellular 100.0 7.7E-33 1.7E-37 218.1 22.4 201 12-223 16-233 (236)
10 PRK13972 GSH-dependent disulfi 100.0 9.2E-34 2E-38 222.9 15.8 187 7-210 2-205 (215)
11 COG0625 Gst Glutathione S-tran 100.0 4.5E-33 9.8E-38 218.3 18.8 185 7-205 1-199 (211)
12 PRK11752 putative S-transferas 100.0 3.4E-32 7.4E-37 219.7 20.2 197 5-211 43-259 (264)
13 KOG0868 Glutathione S-transfer 100.0 2E-32 4.4E-37 198.8 15.8 196 4-211 3-208 (217)
14 PLN02378 glutathione S-transfe 100.0 2E-31 4.4E-36 209.1 20.0 189 11-216 16-205 (213)
15 PTZ00057 glutathione s-transfe 100.0 1.3E-31 2.9E-36 209.0 18.9 193 1-212 1-201 (205)
16 PLN02817 glutathione dehydroge 100.0 1.2E-30 2.6E-35 209.9 20.4 186 12-215 70-256 (265)
17 KOG0867 Glutathione S-transfer 100.0 4.4E-30 9.5E-35 202.6 16.8 198 6-213 2-212 (226)
18 PRK10387 glutaredoxin 2; Provi 100.0 5.9E-30 1.3E-34 200.5 16.4 178 7-204 1-207 (210)
19 KOG1695 Glutathione S-transfer 100.0 2E-28 4.3E-33 187.6 16.4 196 1-212 1-202 (206)
20 TIGR02182 GRXB Glutaredoxin, G 100.0 1E-27 2.2E-32 187.5 16.5 176 8-204 1-206 (209)
21 KOG4420 Uncharacterized conser 99.9 1.7E-25 3.7E-30 171.8 14.9 208 7-218 27-295 (325)
22 KOG1422 Intracellular Cl- chan 99.9 5.8E-24 1.3E-28 159.0 17.4 197 13-222 19-217 (221)
23 PLN02907 glutamate-tRNA ligase 99.9 2.8E-22 6.1E-27 179.7 16.4 156 7-203 3-159 (722)
24 PF13417 GST_N_3: Glutathione 99.8 1.4E-20 3.1E-25 123.2 8.4 74 9-83 1-74 (75)
25 cd03059 GST_N_SspA GST_N famil 99.8 2E-19 4.3E-24 117.1 8.9 73 7-80 1-73 (73)
26 cd03061 GST_N_CLIC GST_N famil 99.8 1.7E-19 3.6E-24 120.8 8.2 71 13-84 20-90 (91)
27 cd03058 GST_N_Tau GST_N family 99.8 3.4E-19 7.3E-24 116.4 8.8 74 7-80 1-74 (74)
28 cd03052 GST_N_GDAP1 GST_N fami 99.8 2.8E-19 6E-24 116.3 7.9 70 7-77 1-73 (73)
29 cd03060 GST_N_Omega_like GST_N 99.8 1.3E-18 2.9E-23 112.6 8.2 68 8-76 2-70 (71)
30 cd03045 GST_N_Delta_Epsilon GS 99.8 1.6E-18 3.4E-23 113.2 8.1 71 7-78 1-74 (74)
31 cd03041 GST_N_2GST_N GST_N fam 99.8 2E-18 4.3E-23 113.5 8.1 73 7-80 2-77 (77)
32 cd03076 GST_N_Pi GST_N family, 99.8 1.4E-18 3E-23 113.1 6.7 71 7-78 2-72 (73)
33 cd03053 GST_N_Phi GST_N family 99.8 3.4E-18 7.4E-23 112.2 8.6 72 7-79 2-76 (76)
34 cd03050 GST_N_Theta GST_N fami 99.8 6.7E-18 1.4E-22 110.8 8.9 73 7-80 1-76 (76)
35 cd03055 GST_N_Omega GST_N fami 99.7 6.3E-18 1.4E-22 114.3 8.4 73 4-77 16-89 (89)
36 cd03185 GST_C_Tau GST_C family 99.7 3.6E-17 7.9E-22 117.7 12.9 124 92-220 2-125 (126)
37 cd03056 GST_N_4 GST_N family, 99.7 7.9E-18 1.7E-22 109.5 8.0 70 7-77 1-73 (73)
38 cd03044 GST_N_EF1Bgamma GST_N 99.7 7.3E-18 1.6E-22 110.3 7.8 70 8-78 2-74 (75)
39 cd03037 GST_N_GRX2 GST_N famil 99.7 8.2E-18 1.8E-22 108.9 7.8 70 7-78 1-71 (71)
40 cd03049 GST_N_3 GST_N family, 99.7 7.7E-18 1.7E-22 109.6 7.6 70 7-77 1-73 (73)
41 COG2999 GrxB Glutaredoxin 2 [P 99.7 1E-16 2.2E-21 117.1 13.4 179 7-205 1-208 (215)
42 KOG4244 Failed axon connection 99.7 8E-17 1.7E-21 125.0 13.7 176 7-201 46-273 (281)
43 cd03039 GST_N_Sigma_like GST_N 99.7 6E-18 1.3E-22 109.8 6.4 71 7-78 1-72 (72)
44 KOG3029 Glutathione S-transfer 99.7 7.8E-17 1.7E-21 125.7 13.6 184 6-201 90-355 (370)
45 cd03048 GST_N_Ure2p_like GST_N 99.7 1.8E-17 3.9E-22 110.1 8.7 73 7-81 2-80 (81)
46 cd03047 GST_N_2 GST_N family, 99.7 1.4E-17 3.1E-22 108.4 7.8 70 7-77 1-73 (73)
47 cd03051 GST_N_GTT2_like GST_N 99.7 1.5E-17 3.3E-22 108.3 7.3 70 7-77 1-74 (74)
48 cd03040 GST_N_mPGES2 GST_N fam 99.7 2.7E-17 5.9E-22 108.1 7.9 72 6-80 1-76 (77)
49 cd03042 GST_N_Zeta GST_N famil 99.7 3.1E-17 6.8E-22 106.6 7.8 70 7-77 1-73 (73)
50 cd03046 GST_N_GTT1_like GST_N 99.7 4.2E-17 9.1E-22 106.9 8.4 73 7-81 1-76 (76)
51 COG0435 ECM4 Predicted glutath 99.7 1.3E-16 2.8E-21 124.3 12.2 208 3-218 48-293 (324)
52 PF13409 GST_N_2: Glutathione 99.7 2.8E-17 6E-22 106.0 7.1 65 14-79 1-70 (70)
53 cd03057 GST_N_Beta GST_N famil 99.7 4.9E-17 1.1E-21 106.9 8.3 73 7-81 1-77 (77)
54 cd03077 GST_N_Alpha GST_N fami 99.7 1.3E-16 2.8E-21 105.4 8.6 72 6-81 1-77 (79)
55 cd03080 GST_N_Metaxin_like GST 99.7 1.9E-16 4E-21 103.6 8.2 67 7-81 2-75 (75)
56 cd03075 GST_N_Mu GST_N family, 99.7 2E-16 4.4E-21 105.1 7.5 73 7-80 1-82 (82)
57 PF02798 GST_N: Glutathione S- 99.7 4.2E-16 9.1E-21 102.1 8.2 72 7-78 1-76 (76)
58 KOG2903 Predicted glutathione 99.7 8.2E-16 1.8E-20 118.8 10.7 210 4-219 35-296 (319)
59 cd03184 GST_C_Omega GST_C fami 99.7 2E-15 4.4E-20 108.4 12.0 122 93-220 2-123 (124)
60 cd03190 GST_C_ECM4_like GST_C 99.7 1.3E-15 2.9E-20 111.9 11.2 127 92-223 3-131 (142)
61 cd03186 GST_C_SspA GST_N famil 99.7 2E-15 4.4E-20 105.5 11.3 106 91-207 1-106 (107)
62 cd03038 GST_N_etherase_LigE GS 99.6 5.5E-16 1.2E-20 103.6 7.5 67 13-81 14-84 (84)
63 cd03043 GST_N_1 GST_N family, 99.6 1.4E-15 2.9E-20 98.9 7.6 66 11-77 6-73 (73)
64 cd00570 GST_N_family Glutathio 99.6 1.5E-15 3.3E-20 97.3 7.8 70 7-77 1-71 (71)
65 cd03054 GST_N_Metaxin GST_N fa 99.6 6.2E-15 1.4E-19 95.5 7.7 65 7-79 1-72 (72)
66 cd03198 GST_C_CLIC GST_C famil 99.6 2.5E-14 5.4E-19 103.0 11.1 114 104-219 7-133 (134)
67 cd03196 GST_C_5 GST_C family, 99.6 2.1E-14 4.5E-19 101.7 10.6 110 89-207 2-114 (115)
68 cd03188 GST_C_Beta GST_C famil 99.6 1.2E-14 2.6E-19 102.5 8.3 104 93-208 2-114 (114)
69 cd03203 GST_C_Lambda GST_C fam 99.6 6E-14 1.3E-18 100.1 11.8 117 90-218 1-119 (120)
70 cd03201 GST_C_DHAR GST_C famil 99.5 2E-13 4.3E-18 97.4 11.7 107 105-218 11-118 (121)
71 cd03189 GST_C_GTT1_like GST_C 99.5 1.1E-13 2.3E-18 98.5 10.3 103 88-202 2-119 (119)
72 cd03182 GST_C_GTT2_like GST_C 99.5 3.5E-13 7.6E-18 95.5 11.7 104 90-204 1-117 (117)
73 cd03210 GST_C_Pi GST_C family, 99.5 2.5E-13 5.4E-18 97.8 9.7 112 92-212 2-114 (126)
74 cd03187 GST_C_Phi GST_C family 99.5 2.1E-13 4.6E-18 96.7 9.3 106 93-208 2-118 (118)
75 cd03191 GST_C_Zeta GST_C famil 99.5 1.5E-13 3.3E-18 98.1 8.3 109 92-210 2-119 (121)
76 cd03209 GST_C_Mu GST_C family, 99.5 2.9E-13 6.2E-18 96.7 9.7 109 93-213 2-112 (121)
77 cd03208 GST_C_Alpha GST_C fami 99.5 5.9E-13 1.3E-17 97.1 10.1 110 93-212 3-117 (137)
78 cd03178 GST_C_Ure2p_like GST_C 99.5 1.8E-13 3.9E-18 96.4 7.0 105 93-208 1-112 (113)
79 cd03177 GST_C_Delta_Epsilon GS 99.5 4.3E-13 9.3E-18 95.4 8.9 105 93-208 2-110 (118)
80 cd03181 GST_C_EFB1gamma GST_C 99.5 5.4E-13 1.2E-17 95.4 9.2 111 93-212 1-118 (123)
81 cd03200 GST_C_JTV1 GST_C famil 99.4 6E-13 1.3E-17 91.0 8.6 95 73-200 1-95 (96)
82 cd03180 GST_C_2 GST_C family, 99.4 1.3E-12 2.8E-17 91.5 9.7 100 93-204 2-110 (110)
83 cd03183 GST_C_Theta GST_C fami 99.4 2.4E-12 5.1E-17 92.6 8.9 105 94-208 2-120 (126)
84 cd03195 GST_C_4 GST_C family, 99.4 5.4E-12 1.2E-16 89.2 9.6 104 92-209 2-112 (114)
85 PF00043 GST_C: Glutathione S- 99.4 3.9E-12 8.4E-17 86.7 8.0 70 122-202 25-95 (95)
86 cd03207 GST_C_8 GST_C family, 99.3 2.8E-12 6.1E-17 88.8 6.6 75 122-209 27-101 (103)
87 cd03079 GST_N_Metaxin2 GST_N f 99.3 4.6E-12 9.9E-17 81.6 6.8 61 12-79 14-74 (74)
88 TIGR02190 GlrX-dom Glutaredoxi 99.3 9.8E-12 2.1E-16 81.9 8.0 73 4-77 7-79 (79)
89 cd03206 GST_C_7 GST_C family, 99.3 6.1E-12 1.3E-16 86.7 6.4 71 122-204 30-100 (100)
90 PF13410 GST_C_2: Glutathione 99.2 2E-11 4.2E-16 78.3 5.8 67 122-197 3-69 (69)
91 cd03204 GST_C_GDAP1 GST_C fami 99.2 7.9E-11 1.7E-15 82.2 7.8 79 122-204 26-111 (111)
92 PF14497 GST_C_3: Glutathione 99.2 3E-11 6.6E-16 83.1 5.4 98 90-200 2-99 (99)
93 cd03179 GST_C_1 GST_C family, 99.2 3.5E-11 7.5E-16 83.5 5.7 95 93-199 2-105 (105)
94 PRK10638 glutaredoxin 3; Provi 99.2 1.4E-10 3E-15 77.1 7.9 73 1-77 1-74 (83)
95 cd03194 GST_C_3 GST_C family, 99.2 2.3E-10 4.9E-15 80.8 9.2 76 122-209 38-113 (114)
96 cd03192 GST_C_Sigma_like GST_C 99.2 2.4E-10 5.2E-15 79.2 8.8 97 93-198 2-104 (104)
97 KOG3027 Mitochondrial outer me 99.2 2.6E-09 5.6E-14 80.4 14.4 172 14-201 33-248 (257)
98 KOG3028 Translocase of outer m 99.2 2.4E-09 5.3E-14 85.7 15.2 173 14-201 16-234 (313)
99 cd03029 GRX_hybridPRX5 Glutare 99.1 3.6E-10 7.8E-15 73.0 8.1 71 6-77 2-72 (72)
100 cd03078 GST_N_Metaxin1_like GS 99.1 3.9E-10 8.5E-15 72.9 7.7 59 13-79 14-72 (73)
101 cd00299 GST_C_family Glutathio 99.1 1.4E-10 3.1E-15 79.2 6.0 92 98-198 2-100 (100)
102 cd03202 GST_C_etherase_LigE GS 99.1 6.6E-10 1.4E-14 79.6 7.3 68 123-200 56-123 (124)
103 cd03193 GST_C_Metaxin GST_C fa 99.0 5.5E-10 1.2E-14 75.0 5.4 68 125-199 19-88 (88)
104 cd03027 GRX_DEP Glutaredoxin ( 98.9 4.4E-09 9.6E-14 68.1 6.8 69 5-74 1-70 (73)
105 PRK10329 glutaredoxin-like pro 98.8 1.2E-08 2.6E-13 67.3 6.7 61 6-67 2-62 (81)
106 cd02066 GRX_family Glutaredoxi 98.8 1.8E-08 3.9E-13 64.4 7.3 69 6-75 1-70 (72)
107 TIGR02196 GlrX_YruB Glutaredox 98.8 2.5E-08 5.4E-13 64.1 6.6 69 7-76 2-73 (74)
108 cd02976 NrdH NrdH-redoxin (Nrd 98.8 2.7E-08 5.8E-13 63.9 6.0 63 6-69 1-64 (73)
109 cd03211 GST_C_Metaxin2 GST_C f 98.7 2.2E-08 4.7E-13 71.9 5.9 72 122-199 54-126 (126)
110 cd03197 GST_C_mPGES2 GST_C fam 98.7 4.8E-08 1E-12 71.2 7.7 68 124-200 78-145 (149)
111 cd03418 GRX_GRXb_1_3_like Glut 98.7 5.9E-08 1.3E-12 63.0 7.3 71 6-77 1-73 (75)
112 cd03205 GST_C_6 GST_C family, 98.7 8.6E-08 1.9E-12 65.6 8.1 65 122-198 34-98 (98)
113 PF14834 GST_C_4: Glutathione 98.7 2.7E-07 5.8E-12 63.5 9.7 105 90-208 1-112 (117)
114 COG0695 GrxC Glutaredoxin and 98.7 1.4E-07 3E-12 62.1 7.5 70 6-76 2-74 (80)
115 TIGR02200 GlrX_actino Glutared 98.6 9.2E-08 2E-12 62.2 6.2 70 6-76 1-75 (77)
116 TIGR02181 GRX_bact Glutaredoxi 98.6 2.1E-07 4.7E-12 61.0 6.6 71 7-78 1-72 (79)
117 TIGR02194 GlrX_NrdH Glutaredox 98.6 1.9E-07 4.2E-12 60.1 6.2 57 7-64 1-57 (72)
118 cd03212 GST_C_Metaxin1_3 GST_C 98.6 5.6E-08 1.2E-12 70.8 3.7 74 122-201 61-135 (137)
119 TIGR02189 GlrX-like_plant Glut 98.6 6.9E-07 1.5E-11 61.3 8.8 72 4-76 7-82 (99)
120 PF00462 Glutaredoxin: Glutare 98.5 1.4E-07 3E-12 58.5 4.6 59 7-66 1-60 (60)
121 PRK11200 grxA glutaredoxin 1; 98.5 7.5E-07 1.6E-11 59.3 8.0 75 6-81 2-84 (85)
122 cd03419 GRX_GRXh_1_2_like Glut 98.5 1E-06 2.3E-11 58.0 8.2 72 6-78 1-76 (82)
123 PHA03050 glutaredoxin; Provisi 98.5 1.3E-06 2.8E-11 60.8 8.6 70 4-74 12-88 (108)
124 TIGR02183 GRXA Glutaredoxin, G 98.4 1.3E-06 2.7E-11 58.4 7.6 74 7-81 2-83 (86)
125 TIGR00365 monothiol glutaredox 98.3 2.7E-06 5.9E-11 58.1 6.8 72 4-76 11-88 (97)
126 cd03028 GRX_PICOT_like Glutare 98.3 4.8E-06 1E-10 56.1 7.0 72 4-76 7-84 (90)
127 TIGR02180 GRX_euk Glutaredoxin 98.3 8.6E-06 1.9E-10 53.7 8.1 71 7-78 1-77 (84)
128 PF10568 Tom37: Outer mitochon 97.9 5.6E-05 1.2E-09 48.5 6.8 56 13-76 12-71 (72)
129 KOG1147 Glutamyl-tRNA syntheta 97.8 2.7E-05 5.8E-10 67.1 4.5 126 55-208 37-162 (712)
130 PRK10824 glutaredoxin-4; Provi 97.8 0.00012 2.7E-09 51.3 6.9 72 4-76 14-91 (115)
131 PRK12759 bifunctional gluaredo 97.8 0.00012 2.6E-09 63.0 8.2 67 7-74 4-79 (410)
132 KOG1752 Glutaredoxin and relat 97.8 0.00027 5.8E-09 48.6 8.2 72 4-76 13-88 (104)
133 cd03031 GRX_GRX_like Glutaredo 97.6 0.00027 5.8E-09 51.9 7.1 70 6-76 1-81 (147)
134 PF04399 Glutaredoxin2_C: Glut 97.5 0.00092 2E-08 48.0 8.6 69 123-205 57-125 (132)
135 PTZ00062 glutaredoxin; Provisi 97.2 0.0014 3.1E-08 50.8 7.2 72 4-76 112-189 (204)
136 cd03199 GST_C_GRX2 GST_C famil 97.2 0.004 8.7E-08 44.4 8.3 67 124-204 59-125 (128)
137 cd02973 TRX_GRX_like Thioredox 97.1 0.0018 3.9E-08 40.6 5.8 58 6-67 2-64 (67)
138 cd03036 ArsC_like Arsenate Red 96.7 0.0022 4.7E-08 44.8 4.0 33 7-39 1-33 (111)
139 cd02977 ArsC_family Arsenate R 96.7 0.0027 5.8E-08 43.9 4.1 32 7-38 1-32 (105)
140 COG4545 Glutaredoxin-related p 96.6 0.011 2.4E-07 37.5 5.7 63 1-67 1-77 (85)
141 PRK01655 spxA transcriptional 96.4 0.0053 1.1E-07 44.3 4.4 32 7-38 2-33 (131)
142 PF05768 DUF836: Glutaredoxin- 96.3 0.022 4.8E-07 37.3 6.2 55 6-63 1-57 (81)
143 TIGR01617 arsC_related transcr 96.2 0.0076 1.6E-07 42.5 4.2 32 7-38 1-32 (117)
144 cd03032 ArsC_Spx Arsenate Redu 96.2 0.013 2.8E-07 41.2 5.2 32 7-38 2-33 (115)
145 TIGR00412 redox_disulf_2 small 96.0 0.038 8.2E-07 35.7 6.4 55 7-67 3-61 (76)
146 PF11287 DUF3088: Protein of u 96.0 0.029 6.2E-07 38.7 5.7 69 14-82 23-109 (112)
147 PRK12559 transcriptional regul 95.8 0.024 5.2E-07 40.8 5.2 33 7-39 2-34 (131)
148 cd03030 GRX_SH3BGR Glutaredoxi 95.7 0.08 1.7E-06 35.6 7.1 67 7-74 2-79 (92)
149 PRK13344 spxA transcriptional 95.7 0.031 6.8E-07 40.3 5.4 32 7-38 2-33 (132)
150 cd03035 ArsC_Yffb Arsenate Red 95.6 0.032 6.8E-07 38.6 5.1 32 7-38 1-32 (105)
151 cd03033 ArsC_15kD Arsenate Red 95.4 0.028 6.1E-07 39.4 4.2 32 7-38 2-33 (113)
152 TIGR00411 redox_disulf_1 small 95.3 0.074 1.6E-06 34.3 5.9 57 6-64 2-62 (82)
153 PRK10026 arsenate reductase; P 95.3 0.03 6.5E-07 40.8 4.3 35 1-38 1-35 (141)
154 COG0278 Glutaredoxin-related p 95.2 0.073 1.6E-06 35.9 5.4 69 4-76 14-92 (105)
155 cd01659 TRX_superfamily Thiore 94.6 0.1 2.3E-06 30.8 4.8 53 7-60 1-58 (69)
156 cd03026 AhpF_NTD_C TRX-GRX-lik 93.9 0.13 2.9E-06 34.2 4.5 58 6-67 15-77 (89)
157 COG1393 ArsC Arsenate reductas 93.8 0.12 2.6E-06 36.4 4.3 32 7-38 3-34 (117)
158 PF13192 Thioredoxin_3: Thiore 93.4 0.7 1.5E-05 29.6 7.1 57 7-69 3-63 (76)
159 PHA02125 thioredoxin-like prot 93.4 0.3 6.6E-06 31.2 5.4 52 7-63 2-53 (75)
160 TIGR01616 nitro_assoc nitrogen 93.1 0.19 4E-06 35.9 4.4 33 6-38 2-34 (126)
161 cd03034 ArsC_ArsC Arsenate Red 93.1 0.17 3.7E-06 35.3 4.1 32 7-38 1-32 (112)
162 PRK10853 putative reductase; P 92.8 0.19 4.2E-06 35.4 4.1 32 7-38 2-33 (118)
163 TIGR00014 arsC arsenate reduct 92.6 0.21 4.5E-06 35.0 4.0 32 7-38 1-32 (114)
164 PF04908 SH3BGR: SH3-binding, 90.5 1.1 2.4E-05 30.5 5.7 70 7-77 3-88 (99)
165 PF11801 Tom37_C: Tom37 C-term 88.7 0.95 2.1E-05 34.1 4.7 38 129-171 112-153 (168)
166 KOG0911 Glutaredoxin-related p 86.1 2.3 5.1E-05 33.3 5.5 71 5-76 139-215 (227)
167 PF00085 Thioredoxin: Thioredo 85.7 8 0.00017 25.5 8.3 70 6-78 20-102 (103)
168 TIGR01295 PedC_BrcD bacterioci 82.0 9.2 0.0002 26.9 6.9 60 7-66 27-103 (122)
169 PF03960 ArsC: ArsC family; I 80.8 2.4 5.1E-05 29.3 3.4 29 10-38 1-29 (110)
170 cd02975 PfPDO_like_N Pyrococcu 79.2 6.5 0.00014 27.2 5.3 52 7-60 25-80 (113)
171 cd02953 DsbDgamma DsbD gamma f 77.8 8.3 0.00018 25.9 5.4 52 7-60 15-77 (104)
172 TIGR03143 AhpF_homolog putativ 77.7 6.2 0.00013 35.6 6.0 57 6-67 479-541 (555)
173 cd02949 TRX_NTR TRX domain, no 77.5 14 0.0003 24.5 6.4 58 7-66 17-80 (97)
174 PRK09381 trxA thioredoxin; Pro 76.7 20 0.00044 24.2 8.0 58 7-66 25-88 (109)
175 TIGR02187 GlrX_arch Glutaredox 76.0 14 0.0003 28.8 6.8 54 6-61 136-192 (215)
176 cd02984 TRX_PICOT TRX domain, 75.8 18 0.0004 23.6 6.6 58 7-66 18-81 (97)
177 cd02947 TRX_family TRX family; 74.3 19 0.00041 22.7 6.6 55 7-65 14-75 (93)
178 PF09635 MetRS-N: MetRS-N bind 72.7 8 0.00017 27.3 4.1 28 55-82 35-64 (122)
179 PRK15317 alkyl hydroperoxide r 71.9 4.2 9.1E-05 36.3 3.3 72 6-79 119-197 (517)
180 cd02963 TRX_DnaJ TRX domain, D 71.7 21 0.00046 24.4 6.3 57 7-65 28-91 (111)
181 TIGR03140 AhpF alkyl hydropero 70.9 4.1 8.9E-05 36.4 3.1 61 6-68 120-183 (515)
182 cd02989 Phd_like_TxnDC9 Phosdu 70.5 27 0.00059 24.1 6.6 59 7-67 26-89 (113)
183 KOG1668 Elongation factor 1 be 68.7 5.2 0.00011 31.5 2.8 59 131-205 10-68 (231)
184 TIGR02187 GlrX_arch Glutaredox 65.2 29 0.00063 27.0 6.5 58 6-65 22-89 (215)
185 PTZ00051 thioredoxin; Provisio 64.9 35 0.00076 22.3 6.1 58 7-66 22-84 (98)
186 cd02951 SoxW SoxW family; SoxW 64.8 26 0.00056 24.3 5.7 17 6-22 17-33 (125)
187 KOG2824 Glutaredoxin-related p 63.6 12 0.00026 30.4 3.9 71 5-76 131-212 (281)
188 COG3019 Predicted metal-bindin 62.9 17 0.00037 26.4 4.2 75 5-80 26-104 (149)
189 TIGR01068 thioredoxin thioredo 61.6 41 0.0009 21.8 7.9 57 7-65 18-80 (101)
190 cd03003 PDI_a_ERdj5_N PDIa fam 60.7 39 0.00084 22.4 5.7 55 7-64 22-83 (101)
191 PRK10996 thioredoxin 2; Provis 59.0 60 0.0013 23.2 6.8 58 7-66 56-119 (139)
192 cd02959 ERp19 Endoplasmic reti 58.4 48 0.001 23.0 6.0 60 7-67 23-91 (117)
193 TIGR02681 phage_pRha phage reg 56.1 12 0.00025 26.0 2.4 26 56-81 2-28 (108)
194 KOG3425 Uncharacterized conser 55.0 42 0.00091 23.8 5.0 69 12-80 42-123 (128)
195 PF06110 DUF953: Eukaryotic pr 54.9 19 0.00042 25.3 3.4 59 12-71 35-107 (119)
196 cd02993 PDI_a_APS_reductase PD 54.7 61 0.0013 21.9 6.0 54 6-60 24-83 (109)
197 cd02962 TMX2 TMX2 family; comp 54.6 63 0.0014 23.8 6.3 60 7-67 51-122 (152)
198 cd02948 TRX_NDPK TRX domain, T 52.9 66 0.0014 21.4 7.5 57 7-66 21-84 (102)
199 PHA02278 thioredoxin-like prot 51.4 74 0.0016 21.6 6.7 58 7-66 18-85 (103)
200 PF04134 DUF393: Protein of un 51.1 64 0.0014 22.0 5.7 69 9-79 1-77 (114)
201 cd02994 PDI_a_TMX PDIa family, 51.1 68 0.0015 21.0 5.9 56 7-64 20-82 (101)
202 PF09849 DUF2076: Uncharacteri 49.9 1.4E+02 0.0029 24.1 8.2 80 68-154 5-88 (247)
203 PF11417 Inhibitor_G39P: Loade 49.3 66 0.0014 20.4 6.5 63 68-163 5-69 (71)
204 PF04564 U-box: U-box domain; 48.8 51 0.0011 20.7 4.5 25 55-80 15-39 (73)
205 KOG0190 Protein disulfide isom 48.7 79 0.0017 28.2 6.9 75 7-83 46-135 (493)
206 PF12290 DUF3802: Protein of u 48.3 63 0.0014 22.5 4.9 84 70-165 9-96 (113)
207 cd03005 PDI_a_ERp46 PDIa famil 48.2 75 0.0016 20.7 5.6 56 7-64 20-84 (102)
208 cd02957 Phd_like Phosducin (Ph 47.7 51 0.0011 22.5 4.7 57 7-68 28-91 (113)
209 cd02950 TxlA TRX-like protein 45.2 1.1E+02 0.0025 21.9 6.4 72 7-80 24-110 (142)
210 cd02956 ybbN ybbN protein fami 44.8 85 0.0018 20.3 6.5 57 7-65 16-78 (96)
211 PTZ00102 disulphide isomerase; 44.3 1.4E+02 0.0031 26.0 8.1 73 7-81 53-139 (477)
212 cd02997 PDI_a_PDIR PDIa family 41.2 1E+02 0.0022 20.1 6.3 58 7-65 21-87 (104)
213 PF13098 Thioredoxin_2: Thiore 40.6 34 0.00073 23.1 2.9 20 7-26 9-28 (112)
214 PTZ00443 Thioredoxin domain-co 39.4 1.9E+02 0.0041 22.8 11.5 72 7-81 56-140 (224)
215 PHA03075 glutaredoxin-like pro 39.3 48 0.001 23.2 3.3 67 6-80 4-70 (123)
216 cd02996 PDI_a_ERp44 PDIa famil 39.3 87 0.0019 20.9 4.8 56 7-64 22-89 (108)
217 cd02987 Phd_like_Phd Phosducin 37.8 1.6E+02 0.0036 22.1 6.5 58 8-68 88-150 (175)
218 PF01323 DSBA: DSBA-like thior 37.1 56 0.0012 24.4 3.9 35 6-40 1-40 (193)
219 TIGR01130 ER_PDI_fam protein d 36.8 1.9E+02 0.0041 25.0 7.7 73 7-81 22-110 (462)
220 cd03004 PDI_a_ERdj5_C PDIa fam 35.1 1.3E+02 0.0029 19.7 5.7 55 7-63 23-83 (104)
221 cd02952 TRP14_like Human TRX-r 34.8 1.6E+02 0.0035 20.6 6.2 55 13-68 38-105 (119)
222 cd02999 PDI_a_ERp44_like PDIa 34.2 1.4E+02 0.0031 19.8 5.7 54 7-63 22-82 (100)
223 PF00731 AIRC: AIR carboxylase 33.9 54 0.0012 24.1 3.1 35 13-47 11-45 (150)
224 cd02954 DIM1 Dim1 family; Dim1 33.7 1.7E+02 0.0036 20.4 5.4 57 9-67 20-82 (114)
225 cd02985 TRX_CDSP32 TRX family, 33.2 1.5E+02 0.0032 19.7 6.4 59 7-66 19-84 (103)
226 PF09413 DUF2007: Domain of un 33.1 52 0.0011 20.1 2.6 30 8-37 2-31 (67)
227 PLN02309 5'-adenylylsulfate re 33.0 2.9E+02 0.0062 24.6 7.9 52 7-60 369-427 (457)
228 COG5494 Predicted thioredoxin/ 32.9 1.5E+02 0.0032 23.4 5.3 71 6-78 12-86 (265)
229 cd03006 PDI_a_EFP1_N PDIa fami 32.5 1.1E+02 0.0024 21.1 4.4 55 7-64 33-95 (113)
230 PF13728 TraF: F plasmid trans 31.8 1.5E+02 0.0032 23.2 5.5 52 7-60 124-188 (215)
231 cd04911 ACT_AKiii-YclM-BS_1 AC 31.5 53 0.0011 21.1 2.4 23 14-36 14-36 (76)
232 cd03020 DsbA_DsbC_DsbG DsbA fa 30.3 65 0.0014 24.5 3.3 22 6-27 80-101 (197)
233 cd03021 DsbA_GSTK DsbA family, 28.7 88 0.0019 24.1 3.8 34 5-38 1-38 (209)
234 cd02978 KaiB_like KaiB-like fa 28.4 1.4E+02 0.003 19.0 3.9 53 6-60 3-60 (72)
235 cd03000 PDI_a_TMX3 PDIa family 27.9 1.8E+02 0.004 19.1 5.9 51 7-60 19-77 (104)
236 TIGR01162 purE phosphoribosyla 27.8 1.1E+02 0.0023 22.8 3.8 33 13-45 9-41 (156)
237 TIGR01764 excise DNA binding d 27.0 93 0.002 17.0 2.8 24 54-77 25-48 (49)
238 COG3118 Thioredoxin domain-con 26.3 2.7E+02 0.0058 23.2 6.1 76 5-82 45-132 (304)
239 PRK09266 hypothetical protein; 25.8 1.4E+02 0.003 24.0 4.6 57 24-81 200-259 (266)
240 cd02955 SSP411 TRX domain, SSP 24.8 2.5E+02 0.0055 19.7 6.1 60 8-69 20-97 (124)
241 PRK10877 protein disulfide iso 24.7 83 0.0018 24.9 3.0 21 7-27 111-131 (232)
242 cd02965 HyaE HyaE family; HyaE 24.6 1.9E+02 0.0042 20.0 4.5 60 7-68 31-98 (111)
243 KOG0912 Thiol-disulfide isomer 24.6 84 0.0018 26.2 3.0 70 10-80 20-106 (375)
244 PF11823 DUF3343: Protein of u 24.4 1.7E+02 0.0036 18.3 3.9 32 7-38 3-34 (73)
245 PF13281 DUF4071: Domain of un 24.2 4.7E+02 0.01 22.6 12.6 89 54-142 39-134 (374)
246 PF09314 DUF1972: Domain of un 24.0 62 0.0013 24.8 2.1 21 61-81 153-173 (185)
247 TIGR00424 APS_reduc 5'-adenyly 23.7 5.2E+02 0.011 23.0 7.9 55 7-63 375-438 (463)
248 COG5515 Uncharacterized conser 22.8 84 0.0018 19.2 2.0 22 6-27 2-27 (70)
249 cd03001 PDI_a_P5 PDIa family, 22.6 2.3E+02 0.0049 18.3 5.8 51 7-60 22-77 (103)
250 PF14595 Thioredoxin_9: Thiore 22.6 41 0.00089 24.0 0.8 53 6-60 44-102 (129)
251 cd02972 DsbA_family DsbA famil 22.3 1.1E+02 0.0024 19.2 2.9 22 7-28 1-22 (98)
252 COG2382 Fes Enterochelin ester 22.0 2.3E+02 0.005 23.6 5.0 99 49-171 92-199 (299)
253 PF12728 HTH_17: Helix-turn-he 21.9 1.5E+02 0.0032 16.7 3.0 26 54-79 25-50 (51)
254 KOG3131 Uncharacterized conser 21.7 54 0.0012 26.3 1.3 20 5-24 154-173 (281)
255 PRK11657 dsbG disulfide isomer 21.1 97 0.0021 24.9 2.8 20 7-26 121-140 (251)
256 cd02961 PDI_a_family Protein D 21.0 2.3E+02 0.0049 17.8 5.6 53 6-60 18-76 (101)
257 PF09868 DUF2095: Uncharacteri 21.0 72 0.0016 22.4 1.7 62 19-80 26-91 (128)
258 PF07511 DUF1525: Protein of u 20.8 1.1E+02 0.0024 21.4 2.6 25 54-78 82-107 (114)
No 1
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-42 Score=264.28 Aligned_cols=219 Identities=47% Similarity=0.793 Sum_probs=194.2
Q ss_pred CceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCC
Q 026934 5 NEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGP 84 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~ 84 (230)
+.++||+++.|||++|++++|.++||+|+.+..|+.+++++|++.||-++|||||++||.+|+||..|++||++.+++++
T Consensus 8 ~~vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~ 87 (231)
T KOG0406|consen 8 GTVKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGP 87 (231)
T ss_pred CeEEEEEeecChHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCC
Confidence 66999999999999999999999999999999999999999999997669999999999999999999999999999644
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHh-cCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHH
Q 026934 85 RLLPQDPYQRAQIRFWASFIQQQLFGSFYKLIS-SNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 85 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~ 163 (230)
+++|+||++|+.++.|.++++..++......+. ..++..+.....+.+.|..||+.|.. +++|+.|++++++|++
T Consensus 88 ~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k----~k~~fgG~~~G~vDi~ 163 (231)
T KOG0406|consen 88 PILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK----GKDFFGGETIGFVDIA 163 (231)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCcCHhhhh
Confidence 499999999999999999999988877777666 44577788899999999999999995 7899999999999999
Q ss_pred HHhhhhhhhh-hhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHHHHHhccC
Q 026934 164 VTATFGPYKA-HEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQFIKQNDLK 227 (230)
Q Consensus 164 l~~~l~~~~~-~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (230)
+++.+.+... .....+.+....+++|.|.+|.++|.+++.+++++++.+.+.++++++++....
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~~~~~ 228 (231)
T KOG0406|consen 164 IGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQGSPN 228 (231)
T ss_pred HHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHHhccc
Confidence 9965555433 333333455557899999999999999999999999999999999999987553
No 2
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=1.2e-38 Score=249.84 Aligned_cols=196 Identities=20% Similarity=0.308 Sum_probs=166.6
Q ss_pred CceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCC
Q 026934 5 NEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGP 84 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~ 84 (230)
+.|+||+++.||+|++|+++|+++|++|+.+.++..+.+++|+++||. |+||+|+++|.+|+||.||++||+++++...
T Consensus 9 ~~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~-g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~ 87 (211)
T PRK09481 9 SVMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPY-QSVPTLVDRELTLYESRIIMEYLDERFPHPP 87 (211)
T ss_pred CeeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCC-CCCCEEEECCEEeeCHHHHHHHHHHhCCCCC
Confidence 459999999999999999999999999999999988888899999999 8999999999999999999999999998776
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHH
Q 026934 85 RLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILV 164 (230)
Q Consensus 85 ~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l 164 (230)
|+|.++.+++++++|+.++...+...........+...+.....+.+.+..+|++|+ +++|++|+++|+||+++
T Consensus 88 -l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-----~~~~l~G~~~t~AD~~l 161 (211)
T PRK09481 88 -LMPVYPVARGESRLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFG-----EKPYFMSEEFSLVDCYL 161 (211)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhc-----cCCcccCCCccHHHHHH
Confidence 999999999999999988766555444333333334456667888999999999998 78999999999999999
Q ss_pred HhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 165 TATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
++.+.++.. .+.++. .+.+|+|++|++++.+||++++++...+
T Consensus 162 ~~~~~~~~~----~~~~~~-~~~~p~l~~w~~~~~~rp~~~~~~~~~~ 204 (211)
T PRK09481 162 APLLWRLPV----LGIELS-GPGAKELKGYMTRVFERDSFLASLTEAE 204 (211)
T ss_pred HHHHHHHHh----cCCCCC-CCCChhHHHHHHHHhccHHHHHHcCHHH
Confidence 998866632 243331 2579999999999999999999986543
No 3
>PLN02473 glutathione S-transferase
Probab=100.00 E-value=5.7e-35 Score=229.57 Aligned_cols=193 Identities=19% Similarity=0.258 Sum_probs=156.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG 83 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~ 83 (230)
|+||+++.||++++|+++|.++|++|+.+.++.. +..++++++||. |+||+|+++|.+|+||.+|++||+++++..
T Consensus 3 ~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~ 81 (214)
T PLN02473 3 VKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPF-GQVPAIEDGDLKLFESRAIARYYATKYADQ 81 (214)
T ss_pred eEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCC-CCCCeEEECCEEEEehHHHHHHHHHHcCCc
Confidence 8999999999999999999999999999988764 567889999999 899999999999999999999999999743
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHhhhhHHHH----H-HHh---cC---chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCc
Q 026934 84 -PRLLPQDPYQRAQIRFWASFIQQQLFGSFY----K-LIS---SN---GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPE 151 (230)
Q Consensus 84 -~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~----~-~~~---~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~ 151 (230)
.+|+|.++.+++++++|+.++...+.+... . .+. .. ....+....++.+.++.||++|+ +++|
T Consensus 82 ~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~ 156 (214)
T PLN02473 82 GTDLLGKTLEHRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLA-----TNRY 156 (214)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhc-----cCCc
Confidence 238999999999999999888766644321 1 121 11 12234456788889999999998 7789
Q ss_pred ccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCC
Q 026934 152 VDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLP 209 (230)
Q Consensus 152 l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 209 (230)
++|+++|+||+++++.+.+........+ + .+++|+|.+|++++.+||+++++..
T Consensus 157 l~Gd~~t~ADi~~~~~~~~~~~~~~~~~--~--~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 157 LGGDEFTLADLTHMPGMRYIMNETSLSG--L--VTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred ccCCCCCHHHHHHHHHHHHHHhccccHH--H--HhcCHHHHHHHHHHhcChhhHHHHH
Confidence 9999999999999998876532211111 1 4679999999999999999998754
No 4
>PRK15113 glutathione S-transferase; Provisional
Probab=100.00 E-value=3.9e-34 Score=224.77 Aligned_cols=193 Identities=21% Similarity=0.260 Sum_probs=156.2
Q ss_pred CceEEEecc--CChhHHHHHHHHHHcCCCceeEECCCCC---CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 5 NEVKLHGMW--ASTYSKRVELALRVKGIPYEYIEEDLRN---KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 5 ~~~~L~~~~--~sp~~~~v~~~L~~~gi~~~~~~v~~~~---~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
+.|+||+++ .||+|++++++|.++||+|+.+.++... ..++|+++||. |+||+|+++|.+|+||.+|++||+++
T Consensus 4 ~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~-g~VP~L~~~~~~l~ES~aI~~YL~~~ 82 (214)
T PRK15113 4 PAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLT-RRVPTLQHDDFELSESSAIAEYLEER 82 (214)
T ss_pred CeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCC-CCCCEEEECCEEEecHHHHHHHHHHH
Confidence 458999976 7999999999999999999999998743 56899999999 89999999999999999999999999
Q ss_pred cCCCC--CCCCCCHHHHHHHHHHHHHHHhhhhHHHHH-----HHhc--CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCC
Q 026934 80 WQNGP--RLLPQDPYQRAQIRFWASFIQQQLFGSFYK-----LISS--NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVP 150 (230)
Q Consensus 80 ~~~~~--~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~ 150 (230)
+++.. +++|.++.+++++++|+.++...+.+.... .+.. .....+...+.+.+.++.+|++|+. +++
T Consensus 83 ~~~~~~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~----~~~ 158 (214)
T PRK15113 83 FAPPAWERIYPADLQARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAP----GQP 158 (214)
T ss_pred cCCCCccccCCCCHHHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhc----CCC
Confidence 97532 388999999999999999987666543221 1111 1223356677889999999999973 357
Q ss_pred cccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 151 EVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 151 ~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
|++|+ +|+|||++++.+.++.. .+.+ . .|+|.+|++++.+||++++++++.+
T Consensus 159 ~l~G~-~TlADi~l~~~l~~~~~----~~~~---~--~p~l~~~~~r~~~rp~~~~~~~~~~ 210 (214)
T PRK15113 159 NLFGE-WCIADTDLALMLNRLVL----HGDE---V--PERLADYATFQWQRASVQRWLALSA 210 (214)
T ss_pred EeeCC-ccHHHHHHHHHHHHHHH----cCCC---C--CHHHHHHHHHHhcCHHHHHHHHHhh
Confidence 99995 99999999999876632 2321 1 2999999999999999999876544
No 5
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=100.00 E-value=8.2e-34 Score=222.32 Aligned_cols=192 Identities=29% Similarity=0.459 Sum_probs=155.7
Q ss_pred EEEeccCChhHHHHHHHHHHcCCCceeEECCCC----CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC
Q 026934 8 KLHGMWASTYSKRVELALRVKGIPYEYIEEDLR----NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG 83 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~----~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~ 83 (230)
+||+++.||+++++|++|.++||+|+.+.++.. ...++++++||. |+||+|+++|.+|+||.+|++||+++++..
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~ 79 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQ-GLVPTLDIDGEVLTQSLAIIEYLEETYPDP 79 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCC-CcCCEEEECCEEeecHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999988862 246789999999 899999999999999999999999999876
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhhHH----HHHHHhc----Cch-hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccC
Q 026934 84 PRLLPQDPYQRAQIRFWASFIQQQLFGS----FYKLISS----NGE-EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDG 154 (230)
Q Consensus 84 ~~l~p~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~~----~~~-~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G 154 (230)
. |.|.++.+++++++|+.++...+.+. +..++.. ... ..+...+.+.+.|+.||++|+.+ +++||+|
T Consensus 80 ~-l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~---~~~~l~G 155 (210)
T TIGR01262 80 P-LLPADPIKRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPH---AGAFCVG 155 (210)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCEeeC
Confidence 6 99999999999999998876554432 1112221 111 22334567889999999999832 3569999
Q ss_pred CCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCc
Q 026934 155 NNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPH 211 (230)
Q Consensus 155 ~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 211 (230)
+++|+|||++++.+.+... .+. ..+.||+|++|+++|.+||+++++..+.
T Consensus 156 ~~~T~ADi~~~~~l~~~~~----~~~---~~~~~p~l~~~~~~~~~rp~~~~~~~~~ 205 (210)
T TIGR01262 156 DTPTLADLCLVPQVYNAER----FGV---DLTPYPTLRRIAAALAALPAFQRAHPEN 205 (210)
T ss_pred CCCCHHHHHHHHHHHHHHH----cCC---CcccchHHHHHHHHHhcCHHHHHhCccc
Confidence 9999999999999877632 121 2467999999999999999999987654
No 6
>PRK10542 glutathionine S-transferase; Provisional
Probab=100.00 E-value=4.5e-34 Score=222.37 Aligned_cols=189 Identities=21% Similarity=0.318 Sum_probs=155.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC----CCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR----NKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQ 81 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~----~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~ 81 (230)
|+||+.+.| .+++++++|+++||+|+.+.+++. ...++|+++||. |+||+|+ +||.+|+||.+|++||+++++
T Consensus 1 m~l~~~~~s-~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~-g~vPvL~~~~g~~l~eS~aI~~YL~~~~~ 78 (201)
T PRK10542 1 MKLFYKPGA-CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPK-GQVPALLLDDGTLLTEGVAIMQYLADSVP 78 (201)
T ss_pred CceeecccH-HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcC-CCCCeEEeCCCcEeecHHHHHHHHHHhCc
Confidence 689998866 699999999999999999988874 245789999999 8999998 688999999999999999998
Q ss_pred CCCCCC-CCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC--chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCc
Q 026934 82 NGPRLL-PQDPYQRAQIRFWASFIQQQLFGSFYKLISSN--GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSG 158 (230)
Q Consensus 82 ~~~~l~-p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t 158 (230)
..+ ++ |.++.+++++++|+.+....+.+.+...+... +...+.....+.+.++.||++|+ +++||+|+++|
T Consensus 79 ~~~-l~~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~s 152 (201)
T PRK10542 79 DRQ-LLAPVGSLSRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALA-----DEQWICGQRFT 152 (201)
T ss_pred ccc-cCCCCCcHHHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhc-----CCCeeeCCCCc
Confidence 766 65 66788999999999988777766554444322 12224456788999999999998 78899999999
Q ss_pred hhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCC
Q 026934 159 VLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPP 210 (230)
Q Consensus 159 ~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 210 (230)
+|||++++++.+.... +. ..+.+|+|.+|++++.++|++++++.+
T Consensus 153 ~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 153 IADAYLFTVLRWAYAV----KL---NLEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHhHHHHHHHHHhhcc----CC---CcccchHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999988776322 22 146799999999999999999998644
No 7
>PLN02395 glutathione S-transferase
Probab=100.00 E-value=1.3e-33 Score=222.03 Aligned_cols=193 Identities=21% Similarity=0.287 Sum_probs=154.0
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG 83 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~ 83 (230)
+|||+.+.| +++|++++|.++|++|+.+.++.. ...++|+++||. |+||+|+++|.+|+||.+|++||+++++..
T Consensus 3 ~~ly~~~~~-~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~ 80 (215)
T PLN02395 3 LKVYGPAFA-SPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPF-GVVPVIVDGDYKIFESRAIMRYYAEKYRSQ 80 (215)
T ss_pred EEEEcCCcC-cHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHHHcCCC
Confidence 899987665 699999999999999999988873 557899999999 899999999999999999999999999752
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHH----Hh-----c--CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCc
Q 026934 84 -PRLLPQDPYQRAQIRFWASFIQQQLFGSFYKL----IS-----S--NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPE 151 (230)
Q Consensus 84 -~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~----~~-----~--~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~ 151 (230)
..|+|.++.+++++++|+.+.+..+.+.+... .. . .+...+.....+.+.++.||..|+ +++|
T Consensus 81 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~ 155 (215)
T PLN02395 81 GPDLLGKTIEERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLS-----KSKY 155 (215)
T ss_pred CcCcCCCChhHHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----CCcc
Confidence 12999999999999999998776554433221 11 1 112234557788899999999998 7789
Q ss_pred ccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCC
Q 026934 152 VDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPP 210 (230)
Q Consensus 152 l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 210 (230)
++|+++|+||+++++++.+.... .+.. ...+.+|+|.+|++++.++|++++++..
T Consensus 156 l~G~~~s~ADi~l~~~~~~~~~~---~~~~-~~~~~~p~L~~w~~~~~~rp~~k~~~~~ 210 (215)
T PLN02395 156 LAGDFVSLADLAHLPFTEYLVGP---IGKA-YLIKDRKHVSAWWDDISSRPAWKEVLAK 210 (215)
T ss_pred ccCCCcCHHHHHHHHHHHHHhcc---cchh-hhhccCchHHHHHHHHHcChHHHHHHHH
Confidence 99999999999999877665221 0100 1146799999999999999999998654
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=100.00 E-value=2.5e-33 Score=218.40 Aligned_cols=192 Identities=22% Similarity=0.322 Sum_probs=156.0
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPR 85 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~ 85 (230)
|+||+++.||++++|+++|+++|++|+.+.++......++.++||. |+||+|+ ++|.+++||.+|++||++.++...
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~-g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~- 78 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPL-GKVPALVTEEGECWFDSPIIAEYIELLNVAPA- 78 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCc-cCCCeEEeCCCCeeecHHHHHHHHHHhCCCCC-
Confidence 5899999999999999999999999999988887667788899999 8999998 788999999999999999987666
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhHHHHHHH---hcC----chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCc
Q 026934 86 LLPQDPYQRAQIRFWASFIQQQLFGSFYKLI---SSN----GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSG 158 (230)
Q Consensus 86 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t 158 (230)
|+|.++.+++++++|+.+....+...+.... ... ....+.....+.+.|+.||++|. +++ ++|+++|
T Consensus 79 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-----~~~-l~Gd~~t 152 (202)
T PRK10357 79 MLPRDPLAALRVRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLV-----DGT-LKTDTVN 152 (202)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhc-----cCc-ccCCCcC
Confidence 9999999999999998877655544332211 111 11224556788999999999998 567 9999999
Q ss_pred hhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCC
Q 026934 159 VLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPP 210 (230)
Q Consensus 159 ~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 210 (230)
+||+++++.+.+...... +... ..++|+|.+|++++.+||+++++.+.
T Consensus 153 ~ADi~l~~~l~~~~~~~~--~~~~--~~~~p~l~~~~~~i~~rp~~~~~~~~ 200 (202)
T PRK10357 153 LATIAIACAVGYLNFRRV--APGW--CVDRPHLVKLVENLFQRESFARTEPP 200 (202)
T ss_pred HHHHHHHHHHHHHHhccc--Ccch--hhcChHHHHHHHHHhcChhhhhcCCC
Confidence 999999998877643211 1111 35799999999999999999998764
No 9
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=7.7e-33 Score=218.09 Aligned_cols=201 Identities=16% Similarity=0.242 Sum_probs=160.0
Q ss_pred ccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC--CCCCCC
Q 026934 12 MWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG--PRLLPQ 89 (230)
Q Consensus 12 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~--~~l~p~ 89 (230)
...||+|++|+++|.++|++|+.+.+++.+++++|+++||. |+||+|+++|.+|+||.+|++||++.++.+ +.+.|.
T Consensus 16 ~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~-g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~ 94 (236)
T TIGR00862 16 IGNCPFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPG-THPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPK 94 (236)
T ss_pred CCCCHhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcC-CCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCC
Confidence 46899999999999999999999999998888999999999 899999999999999999999999999742 226677
Q ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHhhh-----------C--CCCCCcccCC
Q 026934 90 DPYQRAQIRFWASFIQQQLFGSFYKLISSN-GEEQEKAVEEVFEKMNVLEKGMKEL-----------L--PEGVPEVDGN 155 (230)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~-----------~--~~~~~~l~G~ 155 (230)
++..++... .++..+..++.+. +...+.....+.+.+..||..|... . -++++|+.|+
T Consensus 95 ~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd 166 (236)
T TIGR00862 95 HPESNTAGL--------DIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGD 166 (236)
T ss_pred CHHHHHHHH--------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCC
Confidence 766655321 1222222333332 2334455667899999999999731 0 0147899999
Q ss_pred CCchhhHHHHhhhhhhhhhh-hhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHHHHH
Q 026934 156 NSGVLDILVTATFGPYKAHE-EVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQFIKQ 223 (230)
Q Consensus 156 ~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (230)
++|+|||++++.+.++.... ...+.++ .+++|+|.+|++++.++++|+++++..+++...++++.+
T Consensus 167 ~~tlaD~~l~p~l~~l~~~~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~~ 233 (236)
T TIGR00862 167 ELTLADCNLLPKLHIVKVVAKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVAK 233 (236)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHhh
Confidence 99999999999998886542 2335554 688999999999999999999999999999999888743
No 10
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=100.00 E-value=9.2e-34 Score=222.86 Aligned_cols=187 Identities=21% Similarity=0.275 Sum_probs=149.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEe-----CC--eeeehhHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVH-----NG--KPITESYIILEYI 76 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~-----~g--~~i~eS~~I~~yL 76 (230)
|+||+.+ +|++++|+++|+++||+|+.+.+++. ...++|+++||. |+||+|++ +| .+|+||.||++||
T Consensus 2 ~~Ly~~~-~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~-gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL 79 (215)
T PRK13972 2 IDLYFAP-TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPN-NKIPAIVDHSPADGGEPLSLFESGAILLYL 79 (215)
T ss_pred eEEEECC-CCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcC-CCCCEEEeCCCCCCCCceeEEcHHHHHHHH
Confidence 7899877 79999999999999999999998874 336789999999 89999996 45 4799999999999
Q ss_pred HHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHH--Hhc-----CchhHHHHHHHHHHHHHHHHHHHhhhCCCCC
Q 026934 77 DETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKL--ISS-----NGEEQEKAVEEVFEKMNVLEKGMKELLPEGV 149 (230)
Q Consensus 77 ~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~ 149 (230)
++.++ . +.|.++.+++++++|+.+....+.+.+... +.. .+...+.....+.+.+..||.+|+ ++
T Consensus 80 ~~~~~--~-l~p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~ 151 (215)
T PRK13972 80 AEKTG--L-FLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLE-----NS 151 (215)
T ss_pred HHhcC--C-CCCCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhc-----cC
Confidence 99985 3 778889999999999998877666543221 111 112334556778889999999998 78
Q ss_pred CcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCC
Q 026934 150 PEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPP 210 (230)
Q Consensus 150 ~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 210 (230)
+|++|+++|+|||++++.+..... .+ ...+.||+|.+|++++.+||++++++..
T Consensus 152 ~~l~Gd~~t~ADi~l~~~~~~~~~----~~---~~~~~~P~l~~w~~r~~~rp~~~~~~~~ 205 (215)
T PRK13972 152 PWLGGENYSIADIACWPWVNAWTR----QR---IDLAMYPAVKNWHERIRSRPATGQALLK 205 (215)
T ss_pred ccccCCCCCHHHHHHHHHHHHHhh----cC---CcchhCHHHHHHHHHHHhCHHHHHHHHH
Confidence 999999999999999886643311 12 1246799999999999999999887543
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-33 Score=218.33 Aligned_cols=185 Identities=32% Similarity=0.496 Sum_probs=159.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC--CCchhHHhhCCCCccccEEEeCC-eeeehhHHHHHHHHHhcCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR--NKSPLLLQYNSVYKKVPVLVHNG-KPITESYIILEYIDETWQNG 83 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~--~~~~~~~~~~p~~~~vP~L~~~g-~~i~eS~~I~~yL~~~~~~~ 83 (230)
|+||+++.||++.+++++|.++|++|+.+.++.. ...++|+.+||. |+||+|+++| .+|+||.+|++||+++++..
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~-gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~ 79 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPL-GKVPALVDDDGEVLTESGAILEYLAERYPGP 79 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCC-CCCCEEeeCCCCeeecHHHHHHHHHhhCCCC
Confidence 6899999999999999999999999999999986 578999999999 8999999655 49999999999999999988
Q ss_pred CCCCCCCHH---HHHHHHHHHHHHHhhhhHHHHHHHhc--------CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc
Q 026934 84 PRLLPQDPY---QRAQIRFWASFIQQQLFGSFYKLISS--------NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEV 152 (230)
Q Consensus 84 ~~l~p~~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l 152 (230)
+ |+|.++. +++++..|+.+....+.+.+...... .....+...+.+...++.+|..|+ .++|+
T Consensus 80 ~-l~p~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l 153 (211)
T COG0625 80 P-LLPADPLARRARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLA-----DGPYL 153 (211)
T ss_pred C-cCCCCchhHHHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhc-----cCCcc
Confidence 7 9998885 88888899998887777776664443 234456778889999999999999 79999
Q ss_pred cCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhh
Q 026934 153 DGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVK 205 (230)
Q Consensus 153 ~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~ 205 (230)
+|+++|+||+++++.+.++... +.. .+.+|++.+|++++.++|+++
T Consensus 154 ~G~~~tiAD~~~~~~~~~~~~~----~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 154 AGDRFTIADIALAPLLWRLALL----GEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred cCCCCCHHHHHHHHHHHHhhhc----Ccc---cccChHHHHHHHHHHcCCchh
Confidence 9999999999999988885322 211 267999999999999999965
No 12
>PRK11752 putative S-transferase; Provisional
Probab=100.00 E-value=3.4e-32 Score=219.72 Aligned_cols=197 Identities=20% Similarity=0.248 Sum_probs=151.9
Q ss_pred CceEEEeccCChhHHHHHHHHHHc------CCCceeEECCCC---CCchhHHhhCCCCccccEEEeC----CeeeehhHH
Q 026934 5 NEVKLHGMWASTYSKRVELALRVK------GIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHN----GKPITESYI 71 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L~~~------gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~----g~~i~eS~~ 71 (230)
..|+||+.+ ||+|++|+++|+++ |++|+.+.+++. +..++|+++||. |+||+|+++ |.+|+||.+
T Consensus 43 ~~~~Ly~~~-s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~-GkVP~Lv~~dg~~~~~L~ES~A 120 (264)
T PRK11752 43 HPLQLYSLG-TPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPN-SKIPALLDRSGNPPIRVFESGA 120 (264)
T ss_pred CCeEEecCC-CCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCC-CCCCEEEeCCCCCCeEEEcHHH
Confidence 469999865 99999999999997 999999988873 346899999999 899999964 368999999
Q ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHH---HHHHHhcCc----hhHHHHHHHHHHHHHHHHHHHhhh
Q 026934 72 ILEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGS---FYKLISSNG----EEQEKAVEEVFEKMNVLEKGMKEL 144 (230)
Q Consensus 72 I~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~l~~le~~L~~~ 144 (230)
|++||++.++ + |+|.++.+++++++|+.+....+... ....+...+ ...+....++.+.|+.||++|+
T Consensus 121 Il~YL~~~~~--~-L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~-- 195 (264)
T PRK11752 121 ILLYLAEKFG--A-FLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLA-- 195 (264)
T ss_pred HHHHHHHhcC--C-cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhc--
Confidence 9999999987 3 89999999999999998876543111 111111111 1224456678899999999998
Q ss_pred CCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCc
Q 026934 145 LPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPH 211 (230)
Q Consensus 145 ~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 211 (230)
+++||+|+++|+|||++++.+.++.........+..+.+.||+|.+|++++.+||+++++...+
T Consensus 196 ---~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~~~~ 259 (264)
T PRK11752 196 ---EHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGRIVN 259 (264)
T ss_pred ---cCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHHhcc
Confidence 7889999999999999998876653211000111122567999999999999999999976543
No 13
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-32 Score=198.76 Aligned_cols=196 Identities=28% Similarity=0.413 Sum_probs=167.6
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCC----CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR----NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~----~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
+.+.+||+++.|.+++|||++|+.+||+|+.+.+++- +...+|.++||+ ++||+|++||.+|+||.||++||++.
T Consensus 3 ~~KpiLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm-~kVP~L~i~g~tl~eS~AII~YLeEt 81 (217)
T KOG0868|consen 3 AAKPILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPM-EKVPTLVIDGLTLTESLAIIEYLEET 81 (217)
T ss_pred cccchhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCch-hhCCeEEECCEEeehHHHHHHHHHhc
Confidence 3579999999999999999999999999999999983 345689999999 89999999999999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHH----HhcC--chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCccc
Q 026934 80 WQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKL----ISSN--GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVD 153 (230)
Q Consensus 80 ~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~ 153 (230)
+|.++ |+|.|+..|+.++++...+...+.+.-... +... +....-+...+.+-+..||..|..+ .++|-+
T Consensus 82 ~P~pp-LLP~d~~KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~---aGkycv 157 (217)
T KOG0868|consen 82 YPDPP-LLPKDPHKRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSH---AGKYCV 157 (217)
T ss_pred CCCCC-CCCcCHHHHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHc---cCCccc
Confidence 99999 999999999999999999988877754432 2221 1224456677888999999999976 789999
Q ss_pred CCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCc
Q 026934 154 GNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPH 211 (230)
Q Consensus 154 G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~ 211 (230)
|+++|+||+++.+.+...+.+. .+...||-+.+..+.....|.|+...++.
T Consensus 158 GDevtiADl~L~pqv~nA~rf~-------vdl~PYPti~ri~e~l~elpaFq~ahP~n 208 (217)
T KOG0868|consen 158 GDEVTIADLCLPPQVYNANRFH-------VDLTPYPTITRINEELAELPAFQAAHPDN 208 (217)
T ss_pred Cceeehhhhccchhhhhhhhcc-------ccCCcCchHHHHHHHHHhCHHHHhcCCCC
Confidence 9999999999999887774432 23678999999999999999999977653
No 14
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=2e-31 Score=209.10 Aligned_cols=189 Identities=20% Similarity=0.349 Sum_probs=146.4
Q ss_pred eccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCCCCCCCC
Q 026934 11 GMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGPRLLPQD 90 (230)
Q Consensus 11 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~~l~p~~ 90 (230)
.+..||||++|+++|+++|++|+.+.+++..++++|+++||. |+||+|+++|.+|+||.+|++||++++++.. + .+
T Consensus 16 ~~~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~-G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~-l--~~ 91 (213)
T PLN02378 16 HLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQ-GKVPVLKIDDKWVTDSDVIVGILEEKYPDPP-L--KT 91 (213)
T ss_pred CCCCCcchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHhCCCCC-C--CC
Confidence 356699999999999999999999999998888899999999 8999999999999999999999999998654 5 35
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 91 PYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 91 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
+.+++.+...+ ...+..++... ...+.....+.+.|+.+|++|... +++|++|+++|+||+++++.+.+
T Consensus 92 ~~~~a~i~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~l~~le~~L~~~---~~~fl~Gd~~T~ADi~l~~~~~~ 160 (213)
T PLN02378 92 PAEFASVGSNI-------FGTFGTFLKSK-DSNDGSEHALLVELEALENHLKSH---DGPFIAGERVSAVDLSLAPKLYH 160 (213)
T ss_pred HHHHHHHHHHH-------HHHHHHHHhcC-ChhhHHHHHHHHHHHHHHHHHhcC---CCCCcCCCCCchhhHHHHHHHHH
Confidence 66777655432 22222222221 122344567778899999999732 46899999999999999999877
Q ss_pred hhhhhhh-hcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHH
Q 026934 171 YKAHEEV-FGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVA 216 (230)
Q Consensus 171 ~~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (230)
+...... .+.+. .+.||+|.+|++++.+||++++++......-.
T Consensus 161 l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~~~~~~~~~~ 205 (213)
T PLN02378 161 LQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFEKTKTEEKYVIS 205 (213)
T ss_pred HHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCeecccCChHHHHH
Confidence 6432221 12222 46799999999999999999999877665443
No 15
>PTZ00057 glutathione s-transferase; Provisional
Probab=100.00 E-value=1.3e-31 Score=209.02 Aligned_cols=193 Identities=16% Similarity=0.186 Sum_probs=144.6
Q ss_pred CCCCCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHH--------hhCCCCccccEEEeCCeeeehhHHH
Q 026934 1 MEGENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLL--------QYNSVYKKVPVLVHNGKPITESYII 72 (230)
Q Consensus 1 M~~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~--------~~~p~~~~vP~L~~~g~~i~eS~~I 72 (230)
|++ +++||+++.++.+++||++|+++|++|+.+.++. .. +++. ..||+ |+||+|++||.+|+||.||
T Consensus 1 m~~--~~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~-~~-~~~~~~~~~~~~~~nP~-g~vP~L~~~~~~l~eS~AI 75 (205)
T PTZ00057 1 MAE--EIVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE-NG-DAFIEFKNFKKEKDTPF-EQVPILEMDNIIFAQSQAI 75 (205)
T ss_pred CCC--ceEEEecCCCcchHHHHHHHHHcCCCeEEEeccc-cc-hHHHHHHhccccCCCCC-CCCCEEEECCEEEecHHHH
Confidence 664 4999999999999999999999999999987753 22 2332 47999 8999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc
Q 026934 73 LEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEV 152 (230)
Q Consensus 73 ~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l 152 (230)
++||+++++ +.+.+..+++.+..+...+...... +...........+.....+.+.+..||++|+++ +++|+
T Consensus 76 ~~YLa~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~---~~~~l 147 (205)
T PTZ00057 76 VRYLSKKYK----ICGESELNEFYADMIFCGVQDIHYK-FNNTNLFKQNETTFLNEELPKWSGYFENILKKN---HCNYF 147 (205)
T ss_pred HHHHHHHcC----CCCCCHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCee
Confidence 999999997 5566666666665554433222211 111111011222445678899999999999842 34899
Q ss_pred cCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 153 DGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 153 ~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
+|+++|+||+++++.+.++... .+ .+.+.||+|.+|++++.++|++++++.++.
T Consensus 148 ~Gd~~T~AD~~l~~~~~~~~~~---~~---~~l~~~P~l~~~~~r~~~~P~~k~y~~~~~ 201 (205)
T PTZ00057 148 VGDNLTYADLAVFNLYDDIETK---YP---NSLKNFPLLKAHNEFISNLPNIKNYISNRK 201 (205)
T ss_pred eCCcccHHHHHHHHHHHHHHHh---Ch---hhhccChhHHHHHHHHHhChHHHHHHHhCC
Confidence 9999999999999988776421 12 124689999999999999999999987654
No 16
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.98 E-value=1.2e-30 Score=209.91 Aligned_cols=186 Identities=19% Similarity=0.326 Sum_probs=146.3
Q ss_pred ccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCCCCCCCCH
Q 026934 12 MWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGPRLLPQDP 91 (230)
Q Consensus 12 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~~l~p~~~ 91 (230)
...||||++++++|+++|++|+.+.+++.+++++|+++||. |+||+|+++|.+|+||.+|++||+++++++. +. ++
T Consensus 70 ~g~cp~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~-GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~-L~--~~ 145 (265)
T PLN02817 70 LGDCPFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPE-GKVPVVKLDEKWVADSDVITQALEEKYPDPP-LA--TP 145 (265)
T ss_pred CCCCcHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCC-CCCCEEEECCEEEecHHHHHHHHHHHCCCCC-CC--CH
Confidence 34599999999999999999999999998889999999999 8999999888999999999999999998765 53 56
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhh
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPY 171 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~ 171 (230)
.+++++..++.. .+..++... ...+.....+.+.++.||++|++ +++|++|+++|+||+++++.+.++
T Consensus 146 ~era~i~~~l~~-------~~~~~~~~~-~~~~~~~~~l~~~l~~LE~~L~~----~g~yl~Gd~~SlADi~l~p~L~~l 213 (265)
T PLN02817 146 PEKASVGSKIFS-------TFIGFLKSK-DPGDGTEQALLDELTSFDDYIKE----NGPFINGEKISAADLSLGPKLYHL 213 (265)
T ss_pred HHHHHHHHHHHH-------HHHHHhccC-CcchHHHHHHHHHHHHHHHHHhc----CCCeeCCCCCCHHHHHHHHHHHHH
Confidence 788887665421 111222221 11123345677889999999984 468999999999999999998877
Q ss_pred hhhhhh-hcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHH
Q 026934 172 KAHEEV-FGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLV 215 (230)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (230)
...... .++++ .+.+|+|.+|++++.++|+|+++.+..+++.
T Consensus 214 ~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~~~~~~~ 256 (265)
T PLN02817 214 EIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTRALPEDVI 256 (265)
T ss_pred HHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhhcCCCHHHHH
Confidence 543221 12222 4689999999999999999999988765544
No 17
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.4e-30 Score=202.64 Aligned_cols=198 Identities=25% Similarity=0.362 Sum_probs=166.5
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCC---CCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcC-
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDL---RNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQ- 81 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~---~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~- 81 (230)
+|+||+++.+|.++++.+++.++|++|+.+.++. ++..++|+++||. ++||+|+|+|..++||.||+.||.++|.
T Consensus 2 ~~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~-~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~ 80 (226)
T KOG0867|consen 2 KLKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPL-GKVPALEDGGLTLWESHAILRYLAEKYGP 80 (226)
T ss_pred CceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcC-CCCCeEecCCeEEeeHHHHHHHHHHHcCC
Confidence 4899999999999999999999999999997766 6889999999999 8999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhHHH--HHHHhc-------CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc
Q 026934 82 NGPRLLPQDPYQRAQIRFWASFIQQQLFGSF--YKLISS-------NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEV 152 (230)
Q Consensus 82 ~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l 152 (230)
.+..++|.+..+++.+++|+.+..+.+.+.. ..++.. +....+.....+.+.++.+|++|. ++.|+
T Consensus 81 ~~~~l~p~~~~~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~-----~~~yl 155 (226)
T KOG0867|consen 81 LGGILLPKDLKERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLK-----TQVYL 155 (226)
T ss_pred CCcccCCcCHHHHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHc-----cCCcc
Confidence 2223899999999999999999888888763 222221 345567888999999999999999 78999
Q ss_pred cCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchH
Q 026934 153 DGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDK 213 (230)
Q Consensus 153 ~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 213 (230)
.|+++|+||+.+.+.+..+.. ... .. ....++|++.+|++++.++|+++++......
T Consensus 156 ~g~~~tlADl~~~~~~~~~~~-~~~-~~--~~~~~~p~v~~W~~~~~~~P~~~e~~~~~~~ 212 (226)
T KOG0867|consen 156 AGDQLTLADLSLASTLSQFQG-KFA-TE--KDFEKYPKVARWYERIQKRPAYEEANEKGAA 212 (226)
T ss_pred cCCcccHHHHHHhhHHHHHhH-hhh-hh--hhhhhChHHHHHHHHHHhCccHHHHHHHHHH
Confidence 999999999999998877732 111 11 2268899999999999999998886544333
No 18
>PRK10387 glutaredoxin 2; Provisional
Probab=99.97 E-value=5.9e-30 Score=200.47 Aligned_cols=178 Identities=19% Similarity=0.215 Sum_probs=137.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPR 85 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~ 85 (230)
|+||+++.||+|++++++|+++||+|+.+.++.... ..-.+.||. ++||+|+ ++|.+|+||.+|++||+++++.+.
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~-~~~~~~~p~-~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~- 77 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDDE-ATPIRMIGQ-KQVPILQKDDGSYMPESLDIVHYIDELDGKPL- 77 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCch-hhHHHhcCC-cccceEEecCCeEecCHHHHHHHHHHhCCCcc-
Confidence 689999999999999999999999999988865432 223678998 8999995 889999999999999999998643
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC-------c---------------------hhHHHHHHHHHHHHHHH
Q 026934 86 LLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSN-------G---------------------EEQEKAVEEVFEKMNVL 137 (230)
Q Consensus 86 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-------~---------------------~~~~~~~~~~~~~l~~l 137 (230)
+.+ .+++.++.|+.++...+...+...+... . ...++..+++.+.|+.+
T Consensus 78 l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 154 (210)
T PRK10387 78 LTG---KRSPAIEEWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRAL 154 (210)
T ss_pred CCC---cccHHHHHHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 432 2577888888777655443332221100 0 01135577889999999
Q ss_pred HHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhh
Q 026934 138 EKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLV 204 (230)
Q Consensus 138 e~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 204 (230)
|.+|+ + +|++|+++|+||+++++.+.++.... + .+.+|+|.+|++++.+||.+
T Consensus 155 e~~L~-----~-~~l~G~~~s~ADi~l~~~l~~~~~~~---~-----~~~~p~l~~w~~r~~~r~~~ 207 (210)
T PRK10387 155 DPLIV-----K-PNAVNGELSTDDIHLFPILRNLTLVK---G-----IEWPPRVADYRDNMSKKTQV 207 (210)
T ss_pred HHHhc-----C-ccccCCCCCHHHHHHHHHHhcceeec---C-----CCCCHHHHHHHHHHHHHhCC
Confidence 99997 6 99999999999999999998885421 2 12369999999999999976
No 19
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2e-28 Score=187.55 Aligned_cols=196 Identities=17% Similarity=0.240 Sum_probs=159.8
Q ss_pred CCCCCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 1 MEGENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 1 M~~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
|.. ++|++++.+++++.+|+++++.|++|+.+.+...+....+....|+ |++|+|..||..|.+|.||++||++++
T Consensus 1 m~~---ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pf-gqlP~l~vDg~~i~QS~AI~RyLArk~ 76 (206)
T KOG1695|consen 1 MPP---YKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPF-GQLPVLEVDGKKLVQSRAILRYLARKF 76 (206)
T ss_pred CCc---eEEEecCcchhHHHHHHHHHhcCCCcceeeeccccchhhhcccCCC-CCCCEEeECCEeeccHHHHHHHHHHHh
Confidence 555 9999999999999999999999999999999876543445556899 899999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC--ch---hHH-HHHHHHHHHHHHHHHHHhhhCCCCCCcccC
Q 026934 81 QNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSN--GE---EQE-KAVEEVFEKMNVLEKGMKELLPEGVPEVDG 154 (230)
Q Consensus 81 ~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~-~~~~~~~~~l~~le~~L~~~~~~~~~~l~G 154 (230)
+ |.|+++.|.+.++.+.+.+.+.....+...+... +. ..+ .........+..++.+|..+ +++||+|
T Consensus 77 g----l~Gkt~~E~a~vD~i~d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~---~sgflvG 149 (206)
T KOG1695|consen 77 G----LAGKTEEEEAWVDMIVDQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKN---KSGFLVG 149 (206)
T ss_pred C----cCCCCHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhC---CCCeeec
Confidence 9 9999999999999999988876666444433321 11 111 34456677889999999965 6679999
Q ss_pred CCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 155 NNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 155 ~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
+++|+||+.++..+..+... ...+. .+.+|.|.++.+++.++|.+++++.++.
T Consensus 150 d~lT~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i~~r~ 202 (206)
T KOG1695|consen 150 DKLTWADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKKYLESRP 202 (206)
T ss_pred CcccHHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHHHHhcCC
Confidence 99999999999988887542 12211 5678999999999999999999887654
No 20
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.96 E-value=1e-27 Score=187.54 Aligned_cols=176 Identities=20% Similarity=0.254 Sum_probs=133.0
Q ss_pred EEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCCC
Q 026934 8 KLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPRL 86 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~l 86 (230)
+||++..||||++||++|.++|++|+.+.+.... .....+.||. |+||+|+ ++|.+++||.+|++||+++++.+. +
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~-~~~~~~~np~-g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~-~ 77 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLNDD-EETPIRMIGA-KQVPILQKDDGRAMPESLDIVAYFDKLDGEPL-L 77 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCCc-chhHHHhcCC-CCcceEEeeCCeEeccHHHHHHHHHHhCCCcc-C
Confidence 5899999999999999999999999998765433 2344789999 8999998 899999999999999999997643 4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHh-----------------cCch-----------hHHHHHHHHHHHHHHHH
Q 026934 87 LPQDPYQRAQIRFWASFIQQQLFGSFYKLIS-----------------SNGE-----------EQEKAVEEVFEKMNVLE 138 (230)
Q Consensus 87 ~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-----------~~~~~~~~~~~~l~~le 138 (230)
.|. ++..+..|+.++...+...+...+. +..+ ..++..+.+.+.|+.+|
T Consensus 78 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le 154 (209)
T TIGR02182 78 TGK---VSPEIEAWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELD 154 (209)
T ss_pred CCC---ChHHHHHHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHH
Confidence 332 4566777776655444333321111 0000 01356678899999999
Q ss_pred HHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCch-HHHHHHHHHhcchhh
Q 026934 139 KGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYP-LLFSWVQKLNEIPLV 204 (230)
Q Consensus 139 ~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~ 204 (230)
++|+ +++|+.| ++|+|||++++.+.++.... + . .+| +|.+|+++|.+++.+
T Consensus 155 ~~L~-----~~~~l~g-~~TiADi~l~~~l~~~~~~~---~-----~-~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 155 KLID-----GPNAVNG-ELSEDDILVFPLLRNLTLVA---G-----I-NWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHh-----CccccCC-CCCHHHHHHHHHhcCeeeec---C-----C-CCChHHHHHHHHHHHHhCC
Confidence 9998 8999855 69999999999998874321 1 1 256 999999999999875
No 21
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.94 E-value=1.7e-25 Score=171.80 Aligned_cols=208 Identities=19% Similarity=0.247 Sum_probs=152.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCC---CCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDL---RNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG 83 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~---~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~ 83 (230)
+.||.++.|-.+||||+.++++||+|+...|++ +...+||...||. |.||||.++..+|.++.-|++|++++|-++
T Consensus 27 ~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~-gevPVl~~g~~II~d~tqIIdYvErtf~ge 105 (325)
T KOG4420|consen 27 LVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPG-GEVPVLIHGDNIISDYTQIIDYVERTFTGE 105 (325)
T ss_pred ceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCC-CCCceEecCCeecccHHHHHHHHHHhhccc
Confidence 899999999889999999999999999999987 5678999999998 899999999999999999999999999887
Q ss_pred CCCCCC-CHHHHHHHHHHHHHHH-----h-----hhhH---------HH---HHHH-----------hcC-c--------
Q 026934 84 PRLLPQ-DPYQRAQIRFWASFIQ-----Q-----QLFG---------SF---YKLI-----------SSN-G-------- 120 (230)
Q Consensus 84 ~~l~p~-~~~~~a~~~~~~~~~~-----~-----~~~~---------~~---~~~~-----------~~~-~-------- 120 (230)
+.|.|. +..+..++.+.....+ . .+.+ .. +..+ ... +
T Consensus 106 r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~a 185 (325)
T KOG4420|consen 106 RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLA 185 (325)
T ss_pred ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHH
Confidence 667773 2222222222222111 0 0000 00 0000 000 0
Q ss_pred ---------------hhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCC
Q 026934 121 ---------------EEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDP 185 (230)
Q Consensus 121 ---------------~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~ 185 (230)
....+....+...|+.+|+-|.+++. ...||+|+++|+||+.+.+.|+++.+..-. ...+..
T Consensus 186 kqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~-~~~wL~G~efslADVsLg~~LhRL~~Lg~e--~~yw~~ 262 (325)
T KOG4420|consen 186 KQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKL-CELWLCGCEFSLADVSLGATLHRLKFLGLE--KKYWED 262 (325)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccc-cceeeccccchHHHHHHHHHHHHHHHcccH--HHhccc
Confidence 11123456667778888888875443 468999999999999999999998654211 122445
Q ss_pred CCchHHHHHHHHHhcchhhhccCCCchHHHHHH
Q 026934 186 EKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALL 218 (230)
Q Consensus 186 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (230)
.+.|+|..|+.++.+|++|++++.....+-.+.
T Consensus 263 gsrpnle~Yf~rvrrR~sf~kvlg~~fnilr~~ 295 (325)
T KOG4420|consen 263 GSRPNLESYFERVRRRFSFRKVLGDIFNILRFR 295 (325)
T ss_pred CCCccHHHHHHHHHhhhHHHHhhhhHHHHHHHH
Confidence 689999999999999999999998877766533
No 22
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.93 E-value=5.8e-24 Score=159.00 Aligned_cols=197 Identities=17% Similarity=0.292 Sum_probs=162.1
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCCCCCCCCHH
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGPRLLPQDPY 92 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~~l~p~~~~ 92 (230)
..|||||++.+.|+++|++|..+.|++..++++|+.+.|. +++|+|..|+..++||..|.++|++.++.++ +--..+.
T Consensus 19 Gdcpf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~-~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~-~~~~~~~ 96 (221)
T KOG1422|consen 19 GDCPFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPG-GKPPVLKFDEKWVTDSDKIEEFLEEKLPPPK-LPTLAPP 96 (221)
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCC-CCCCeEEeCCceeccHHHHHHHHHHhcCCCC-CcccCCH
Confidence 4799999999999999999999999999999999999998 8999999999999999999999999998765 3222234
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSN-GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPY 171 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~ 171 (230)
|.+. +...++..+..++.+. +...+..+..+.+.|..||.+|.+.. .++||.|+++|.||+.+.+-|..+
T Consensus 97 E~as-------ag~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~--~~~Fl~Gd~lt~aDcsLlPKL~~i 167 (221)
T KOG1422|consen 97 ESAS-------AGSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPS--RRKFLDGDKLTLADCSLLPKLHHI 167 (221)
T ss_pred HHHh-------hHHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCcc--CCccccCCeeeeehhhhchhHHHH
Confidence 4332 2234444555554443 33556667888889999999999521 689999999999999999999999
Q ss_pred hhhhhhh-cCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHHHH
Q 026934 172 KAHEEVF-GLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQFIK 222 (230)
Q Consensus 172 ~~~~~~~-~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (230)
+.....+ ++++ .++.+.+++|++.+.++++|..+.+...++...+....
T Consensus 168 ~va~k~yk~~~I--P~~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~~ 217 (221)
T KOG1422|consen 168 KVAAKHYKNFEI--PASLTGVWRYLKNAYARDEFTNTCPADQEIILAYAPVA 217 (221)
T ss_pred HHHHHHhcCCCC--chhhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhhh
Confidence 8876665 5566 78999999999999999999999999988887766543
No 23
>PLN02907 glutamate-tRNA ligase
Probab=99.89 E-value=2.8e-22 Score=179.71 Aligned_cols=156 Identities=18% Similarity=0.213 Sum_probs=127.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPR 85 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~ 85 (230)
++||+.+.|+ +.++.++|++.|++|+.+. .+|. |+||+|+ ++|.+|+||.||++||++.++...
T Consensus 3 ~kLy~~~~S~-~~~v~~~L~~lgv~~e~~~------------~~p~-GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~- 67 (722)
T PLN02907 3 AKLSFPPDSP-PLAVIAAAKVAGVPLTIDP------------SLKS-GSAPTLLFSSGEKLTGTNVLLRYIARSASLPG- 67 (722)
T ss_pred EEEEECCCCC-hHHHHHHHHHcCCCcEEee------------cCCC-CCCcEEEECCCCEEECHHHHHHHHHHhCCCcC-
Confidence 8999888775 6689999999999999864 2577 8999999 688999999999999999998766
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHH
Q 026934 86 LLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVT 165 (230)
Q Consensus 86 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~ 165 (230)
|+|.++.+++++++|+.+...... ...+...++.||.+|+ .++||+|+++|+|||+++
T Consensus 68 L~p~d~~erAqV~qWL~~~~~~~~-----------------~~~l~~~L~~LE~~L~-----~rtYLvGd~lTLADIaL~ 125 (722)
T PLN02907 68 FYGQDAFESSQVDEWLDYAPTFSS-----------------GSEFENACEYVDGYLA-----SRTFLVGYSLTIADIAIW 125 (722)
T ss_pred CCCCCHHHHHHHHHHHHHHhhccc-----------------HHHHHHHHHHHHHHhc-----cCCeecCCCCCHHHHHHH
Confidence 999999999999999988754210 0135667899999998 789999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchh
Q 026934 166 ATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPL 203 (230)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~ 203 (230)
+.+....... .+.. ....||+|.+|++++.++|+
T Consensus 126 ~~L~~~~~~~--~~~~--~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 126 SGLAGSGQRW--ESLR--KSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHhhhhhh--hccc--ccccCHHHHHHHHHHHhCCC
Confidence 8775441100 0111 14679999999999999999
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.84 E-value=1.4e-20 Score=123.22 Aligned_cols=74 Identities=45% Similarity=0.717 Sum_probs=70.7
Q ss_pred EEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCC
Q 026934 9 LHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNG 83 (230)
Q Consensus 9 L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~ 83 (230)
||++++||||+|+|++|.++||+|+.+.++.....+++.+.||. ++||+|++||.+++||.+|++||+++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~-~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPK-GKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTT-SBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhccc-ccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999988888999999999 899999999999999999999999999854
No 25
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.81 E-value=2e-19 Score=117.14 Aligned_cols=73 Identities=36% Similarity=0.474 Sum_probs=69.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
|+||+.+.||+|++++++|+++|++|+.+.++..+..+++++.||. |++|+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPY-GTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 6899999999999999999999999999999988778899999999 899999999999999999999999874
No 26
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.80 E-value=1.7e-19 Score=120.84 Aligned_cols=71 Identities=23% Similarity=0.338 Sum_probs=67.2
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCC
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGP 84 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~ 84 (230)
..||||+++|++|+++||+|+.+.+++.+++++|+++||. |++|+|.++|.+|+||.+|++||+++++..+
T Consensus 20 g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~-g~vPvL~~~~~~i~eS~~I~eYLde~~~~~~ 90 (91)
T cd03061 20 GNCPFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPG-TQPPFLLYNGEVKTDNNKIEEFLEETLCPPK 90 (91)
T ss_pred CCChhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCC-CCCCEEEECCEEecCHHHHHHHHHHHccCCC
Confidence 5799999999999999999999999999999999999999 8999999999999999999999999987543
No 27
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.80 E-value=3.4e-19 Score=116.37 Aligned_cols=74 Identities=68% Similarity=1.112 Sum_probs=68.3
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
|+||+++.||+|++++++|+++|++|+.+.++...+.+++++.||..+++|+|+++|.+++||.+|++||++.+
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 68999999999999999999999999999998887788999999932799999999999999999999999864
No 28
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.80 E-value=2.8e-19 Score=116.27 Aligned_cols=70 Identities=27% Similarity=0.463 Sum_probs=64.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCC---CCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDL---RNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~---~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
.+||+++.||+|++++++|+++|++|+.+.+++ ....++|+++||. |+||+|+++|.+++||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~-g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPT-GEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 479999999999999999999999999998877 3557889999999 899999999999999999999995
No 29
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.78 E-value=1.3e-18 Score=112.60 Aligned_cols=68 Identities=35% Similarity=0.470 Sum_probs=64.4
Q ss_pred EEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEe-CCeeeehhHHHHHHH
Q 026934 8 KLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVH-NGKPITESYIILEYI 76 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~-~g~~i~eS~~I~~yL 76 (230)
+||++++||||++++++|+++|++|+.+.++.....++++++||. |+||+|++ ||..++||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~-~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELKNKPAEMLAASPK-GTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCC-CCCCEEEECCCcEEecHHHHHHhh
Confidence 799999999999999999999999999999987778899999999 89999996 599999999999997
No 30
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.77 E-value=1.6e-18 Score=113.16 Aligned_cols=71 Identities=31% Similarity=0.365 Sum_probs=65.4
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
|+||+++.||+|++++++|+++|++|+.+.+++. ...+++.+.||. |++|+|+++|.+++||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQ-HTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcC-CCCCEEEECCEEEEcHHHHHHHHhC
Confidence 6899999999999999999999999999988863 346899999999 8999999999999999999999974
No 31
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.77 E-value=2e-18 Score=113.54 Aligned_cols=73 Identities=22% Similarity=0.229 Sum_probs=65.5
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEe--CCeeeehhHHHHHHHHHhc
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVH--NGKPITESYIILEYIDETW 80 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~--~g~~i~eS~~I~~yL~~~~ 80 (230)
++||+++.||||++++++|.++|++|+.+.++... ..+++++.||. ++||+|++ +|.+++||.+|++||++++
T Consensus 2 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 2 LELYEFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGK-VQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred ceEecCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCC-CcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 78999999999999999999999999999887543 46789999999 89999995 4689999999999999874
No 32
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.76 E-value=1.4e-18 Score=113.09 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=65.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
|+||+++.|++|+++|++|.++|++|+.+.++.....+++..+||. |++|+|+++|.+++||.+|++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLF-GQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCC-CCCCEEEECCEEEEcHHHHHHHHhc
Confidence 8999999999999999999999999999998875445678899999 8999999999999999999999976
No 33
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.76 E-value=3.4e-18 Score=112.16 Aligned_cols=72 Identities=38% Similarity=0.499 Sum_probs=66.3
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
++||+++.||+|++++++|+++|++|+.+.++.. ...+++.++||. |++|+|+++|.+++||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~-~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPF-GQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCC-CCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 7999999999999999999999999999988763 456789999999 89999999999999999999999863
No 34
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.75 E-value=6.7e-18 Score=110.79 Aligned_cols=73 Identities=32% Similarity=0.435 Sum_probs=66.4
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
++||+++.|+++++++++|+++|++|+.+.++.. ...+++.+.||. +++|+|+++|.+++||.+|++||++++
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPF-GKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcC-CCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 5799999999999999999999999999988863 235689999999 899999999999999999999999864
No 35
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.75 E-value=6.3e-18 Score=114.26 Aligned_cols=73 Identities=38% Similarity=0.567 Sum_probs=67.5
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeC-CeeeehhHHHHHHHH
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHN-GKPITESYIILEYID 77 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~-g~~i~eS~~I~~yL~ 77 (230)
++.++||+++.||+|++++++|+++|++|+.+.++.....+++.+.||. +++|+|+++ |.+++||.+|++||+
T Consensus 16 ~~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~-~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 16 PGIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQ-GKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CCcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCC-CCcCEEEECCCCEEECHHHHHHhhC
Confidence 3569999999999999999999999999999999887767889999999 899999965 899999999999985
No 36
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.75 E-value=3.6e-17 Score=117.69 Aligned_cols=124 Identities=44% Similarity=0.729 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhh
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPY 171 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~ 171 (230)
.+++++++|+.+.+..+.+.+...+...++..+.....+.+.++.||++|+ +++|++|+++|+|||++++.+.++
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~t~ADi~l~~~~~~~ 76 (126)
T cd03185 2 YERAVARFWAAFIDDKLFPAGRKVLAAKGEEREKAKEEALEALKVLEEELG-----GKPFFGGDTIGYVDIALGSFLGWF 76 (126)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCCCcchHHHHHHHHHHHH
Confidence 578999999999998888887666554444556678899999999999998 789999999999999999999887
Q ss_pred hhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHH
Q 026934 172 KAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQF 220 (230)
Q Consensus 172 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (230)
.......+.+....+.+|++.+|++++.++|++++++...+...+++++
T Consensus 77 ~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 77 RAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHHHcCccccCcccCchHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 5543333433222467999999999999999999999998887776654
No 37
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=7.9e-18 Score=109.47 Aligned_cols=70 Identities=39% Similarity=0.608 Sum_probs=64.6
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
++||+++.||+|++++++|+++|++|+.+.++.. ...+++.+.||. +++|+|+++|.+|.||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPN-GEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 5899999999999999999999999999988763 456889999999 899999999999999999999984
No 38
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.74 E-value=7.3e-18 Score=110.31 Aligned_cols=70 Identities=24% Similarity=0.281 Sum_probs=65.0
Q ss_pred EEEeccCChhHHHHHHHHHHcCCCceeEECCCC--CCchhHHhhCCCCccccEEEe-CCeeeehhHHHHHHHHH
Q 026934 8 KLHGMWASTYSKRVELALRVKGIPYEYIEEDLR--NKSPLLLQYNSVYKKVPVLVH-NGKPITESYIILEYIDE 78 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~--~~~~~~~~~~p~~~~vP~L~~-~g~~i~eS~~I~~yL~~ 78 (230)
+||+++.||++++++++|+++|++|+.+.++.. +..++|+++||. |++|+|++ +|.+|+||.+|++||++
T Consensus 2 ~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~-~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 2 TLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPL-GKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred eEecCCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCC-CCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 799999999999999999999999999999874 567899999999 89999995 68999999999999975
No 39
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.74 E-value=8.2e-18 Score=108.88 Aligned_cols=70 Identities=26% Similarity=0.350 Sum_probs=61.6
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeC-CeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHN-GKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~-g~~i~eS~~I~~yL~~ 78 (230)
|+||+++.||||+++|++|.++|++|+.+.++... .....+.+|. +++|+|+++ |.++.||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~-~~~~~~~~~~-~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD-EATPIRMIGA-KQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc-hHHHHHhcCC-CccCEEEeCCCeEeehHHHHHHHHhC
Confidence 68999999999999999999999999999887643 3345678998 899999965 8999999999999974
No 40
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.74 E-value=7.7e-18 Score=109.61 Aligned_cols=70 Identities=30% Similarity=0.418 Sum_probs=65.5
Q ss_pred eEEEeccCChhHHHHHHHHHH--cCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRV--KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~--~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~ 77 (230)
|+||+++.||+|+++|++|++ +|++|+.+.++.....+++++.||. +++|+|+ ++|..+.||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPL-GKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCC-CCCCEEEECCCCEEECHHHHHhhhC
Confidence 589999999999999999999 8999999999887778899999999 8999998 68899999999999985
No 41
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1e-16 Score=117.06 Aligned_cols=179 Identities=21% Similarity=0.265 Sum_probs=127.4
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPR 85 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~ 85 (230)
|+||-+.+||||-|+|+++-.+|||++.+....++.....+-+.. .+||+|. ++|+.+.||..|++|+++..+++-
T Consensus 1 MkLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~Tp~rmiG~--KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~- 77 (215)
T COG2999 1 MKLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEETPIRMIGQ--KQVPILQKEDGRAMPESLDIVHYVDELDGKPL- 77 (215)
T ss_pred CceeEeccChHHHHHHHHhhccCCChhhheeccCcccChhhhhcc--cccceEEccccccchhhhHHHHHHHHhcCchh-
Confidence 689999999999999999999999999987766543333333333 5899999 899999999999999999988653
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhhHHHHH-----------------HHhcCch-----------hHHHHHHHHHHHHHHH
Q 026934 86 LLPQDPYQRAQIRFWASFIQQQLFGSFYK-----------------LISSNGE-----------EQEKAVEEVFEKMNVL 137 (230)
Q Consensus 86 l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-----------~~~~~~~~~~~~l~~l 137 (230)
+.+. -+-.+..|+..+.........+ +|....+ .......++...|+.+
T Consensus 78 lt~~---~~pai~~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l 154 (215)
T COG2999 78 LTGK---VRPAIEAWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRAL 154 (215)
T ss_pred hccC---cCHHHHHHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHH
Confidence 3332 2334555655554444333333 2222111 2234578889999999
Q ss_pred HHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhh
Q 026934 138 EKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVK 205 (230)
Q Consensus 138 e~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~ 205 (230)
+.++. +..-+-| .+|.-||.+|++|+++. -..|..+ ..++..|..+|.+...+.
T Consensus 155 ~~Li~-----~~s~~n~-~l~~ddi~vFplLRnlt---~v~gi~w-----ps~v~dy~~~msektqV~ 208 (215)
T COG2999 155 DKLIV-----GPSAVNG-ELSEDDILVFPLLRNLT---LVAGIQW-----PSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHhc-----Ccchhcc-ccchhhhhhhHHhccce---ecccCCC-----cHHHHHHHHHHHHhhCcc
Confidence 99997 4443555 59999999999999883 2234333 358999999998765553
No 42
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.74 E-value=8e-17 Score=124.97 Aligned_cols=176 Identities=20% Similarity=0.258 Sum_probs=129.2
Q ss_pred eEEEecc-------CChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 7 VKLHGMW-------ASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 7 ~~L~~~~-------~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
+-||.|+ .||||.++..+|...+||||.+.-.+ ...+.. |++|.++-||..|.||..|..+|.+.
T Consensus 46 VYLyQF~R~~~~PnLSPfClKvEt~lR~~~IpYE~~~~~~-------~~rSr~-G~lPFIELNGe~iaDS~~I~~~L~~h 117 (281)
T KOG4244|consen 46 VYLYQFPRTKTCPNLSPFCLKVETFLRAYDIPYEIVDCSL-------KRRSRN-GTLPFIELNGEHIADSDLIEDRLRKH 117 (281)
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHhCCCceeccccc-------eeeccC-CCcceEEeCCeeccccHHHHHHHHHH
Confidence 5677764 89999999999999999999875443 123444 89999999999999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHH----------------------------H-----hcC-------
Q 026934 80 WQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKL----------------------------I-----SSN------- 119 (230)
Q Consensus 80 ~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~----------------------------~-----~~~------- 119 (230)
++-+.+ .++.+++..+.+...++..+...+..+ + ...
T Consensus 118 f~~~~~---L~~e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g 194 (281)
T KOG4244|consen 118 FKIPDD---LSAEQRAQSRALSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTG 194 (281)
T ss_pred cCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 875432 345667777766665554433332221 1 000
Q ss_pred --c-hhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCC--CCCCCchHHHHH
Q 026934 120 --G-EEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKV--LDPEKYPLLFSW 194 (230)
Q Consensus 120 --~-~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~--~~~~~~p~l~~~ 194 (230)
+ -+.++....+.+.|..++..|+ +++||+|+++|-+|+++|+.|..+.+ + ++..+ +..+++|+|.+|
T Consensus 195 ~IG~f~~~Ei~ell~rDlr~i~~~Lg-----~KkflfGdkit~~DatvFgqLa~v~Y--P-~~~~i~d~le~d~p~l~eY 266 (281)
T KOG4244|consen 195 AIGDFESAEIDELLHRDLRAISDYLG-----DKKFLFGDKITPADATVFGQLAQVYY--P-FRSHISDLLEGDFPNLLEY 266 (281)
T ss_pred cccCcCHHHHHHHHHHHHHHHHHHhC-----CCccccCCCCCcceeeehhhhhheec--c-CCCcHHHHHhhhchHHHHH
Confidence 0 1223456777899999999999 89999999999999999998877755 2 11111 125789999999
Q ss_pred HHHHhcc
Q 026934 195 VQKLNEI 201 (230)
Q Consensus 195 ~~~~~~~ 201 (230)
++|+.+.
T Consensus 267 ceRIr~~ 273 (281)
T KOG4244|consen 267 CERIRKE 273 (281)
T ss_pred HHHHHHH
Confidence 9999874
No 43
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.73 E-value=6e-18 Score=109.81 Aligned_cols=71 Identities=25% Similarity=0.302 Sum_probs=63.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
|+||+++.|++|+++|++|+++|++|+.+.++... ..+++.++||. +++|+|+++|.+|+||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~-~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPF-GQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcC-CCCCEEEECCEEEEecHHHHHHhhC
Confidence 68999999999999999999999999999888742 23448899999 8999999999999999999999974
No 44
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.73 E-value=7.8e-17 Score=125.67 Aligned_cols=184 Identities=16% Similarity=0.324 Sum_probs=122.5
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH-------
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE------- 78 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~------- 78 (230)
+++||.|..||||.+||.+|.+.||+|+.+.|++-.+.+- +-+.. .|||+|...|..+.||.+|+.-|+.
T Consensus 90 ~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r~eI--k~Ssy-kKVPil~~~Geqm~dSsvIIs~laTyLq~~~q 166 (370)
T KOG3029|consen 90 DLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLRQEI--KWSSY-KKVPILLIRGEQMVDSSVIISLLATYLQDKRQ 166 (370)
T ss_pred eEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhhhhc--ccccc-ccccEEEeccceechhHHHHHHHHHHhccCCC
Confidence 6899999999999999999999999999999998542221 12344 7999999778779999999988743
Q ss_pred -------hcCCCC--------------CCC-------C-CCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC----------
Q 026934 79 -------TWQNGP--------------RLL-------P-QDPYQRAQIRFWASFIQQQLFGSFYKLISSN---------- 119 (230)
Q Consensus 79 -------~~~~~~--------------~l~-------p-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---------- 119 (230)
.||.-+ +++ | .+-..+...+.|-.|++..+.-.+.+..+.+
T Consensus 167 ~l~eiiq~yPa~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFew 246 (370)
T KOG3029|consen 167 DLGEIIQMYPATSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEW 246 (370)
T ss_pred CHHHHHHhccccccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHH
Confidence 233000 000 0 0112233556666676655544444321110
Q ss_pred ----ch--------------------------------hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHH
Q 026934 120 ----GE--------------------------------EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 120 ----~~--------------------------------~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~ 163 (230)
++ ...+.++.+.++++.+=..|+. +++|+.|.+|++||++
T Consensus 247 f~q~G~w~~~FpawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgk----nr~flGG~kPnLaDLs 322 (370)
T KOG3029|consen 247 FSQAGEWDVHFPAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGK----NRPFLGGKKPNLADLS 322 (370)
T ss_pred HHHcCCccccCchHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCC----CCCccCCCCCchhhhh
Confidence 00 0012245555555555555553 7899999999999999
Q ss_pred HHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 164 VTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 164 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
+|+.|+.++++..+-. .-....+.+|+-+|++.
T Consensus 323 vfGvl~sm~gc~afkd-----~~q~t~I~eW~~rmeal 355 (370)
T KOG3029|consen 323 VFGVLRSMEGCQAFKD-----CLQNTSIGEWYYRMEAL 355 (370)
T ss_pred hhhhhhHhhhhhHHHH-----HHhcchHHHHHHHHHHH
Confidence 9999999987755422 22368899999999863
No 45
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.73 E-value=1.8e-17 Score=110.10 Aligned_cols=73 Identities=27% Similarity=0.432 Sum_probs=66.5
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeC---CeeeehhHHHHHHHHHhc
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHN---GKPITESYIILEYIDETW 80 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~---g~~i~eS~~I~~yL~~~~ 80 (230)
++||+++. |+|++++++|+++|++|+.+.++.. ...++|+++||. ++||+|+++ |..|+||.+|++||++++
T Consensus 2 ~~Ly~~~~-~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~ 79 (81)
T cd03048 2 ITLYTHGT-PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPN-GRIPAIVDHNGTPLTVFESGAILLYLAEKY 79 (81)
T ss_pred eEEEeCCC-CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcC-CCCCEEEeCCCCceEEEcHHHHHHHHHHHh
Confidence 78999885 9999999999999999999988863 456889999999 899999976 899999999999999988
Q ss_pred C
Q 026934 81 Q 81 (230)
Q Consensus 81 ~ 81 (230)
+
T Consensus 80 ~ 80 (81)
T cd03048 80 D 80 (81)
T ss_pred C
Confidence 6
No 46
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.73 E-value=1.4e-17 Score=108.35 Aligned_cols=70 Identities=30% Similarity=0.418 Sum_probs=64.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
|+||+++.||++++++++|+++|++|+.+.++.. ...++++++||. |++|+|+++|.+|+||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~-~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPN-GRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCC-CCCCEEEECCEEEECHHHHHHHhC
Confidence 5899999999999999999999999999988752 346889999999 899999999999999999999984
No 47
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.73 E-value=1.5e-17 Score=108.30 Aligned_cols=70 Identities=36% Similarity=0.491 Sum_probs=63.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~ 77 (230)
|+||+++.||+|++++++|.++|++|+.+.++.. ...+++.+.||. +++|+|+ ++|.+++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPA-GTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCC-CCCCEEEeCCCCEEecHHHHHHHhC
Confidence 5899999999999999999999999999988763 346789999999 8999999 68899999999999985
No 48
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.72 E-value=2.7e-17 Score=108.15 Aligned_cols=72 Identities=25% Similarity=0.448 Sum_probs=62.9
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeC----CeeeehhHHHHHHHHHhc
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHN----GKPITESYIILEYIDETW 80 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~----g~~i~eS~~I~~yL~~~~ 80 (230)
+++||+++.||||++++++|.++|++|+.+.+++... .+ ...||. ++||+|+++ |.+++||.+|++||++..
T Consensus 1 ~i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~~-~~-~~~~~~-~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 1 KITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVSR-KE-IKWSSY-KKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchhH-HH-HHHhCC-CccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 4899999999999999999999999999998876442 23 357998 899999954 789999999999999875
No 49
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.72 E-value=3.1e-17 Score=106.65 Aligned_cols=70 Identities=39% Similarity=0.578 Sum_probs=64.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
|+||+++.|++++++|++|+++|++|+.+.++.. ...+++++.||. +++|+|+++|.+++||.+|++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQ-GLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 6899999999999999999999999999988863 456889999999 899999999999999999999985
No 50
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.72 E-value=4.2e-17 Score=106.92 Aligned_cols=73 Identities=33% Similarity=0.435 Sum_probs=66.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQ 81 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~ 81 (230)
|+||+++. +++++++++|+++|++|+.+.++.. ...+++.+.||. +++|+|+++|.+++||.+|++||++.++
T Consensus 1 ~~l~~~~~-~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~-~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPR-SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPL-GKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCC-CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 58998886 5899999999999999999988863 567889999999 8999999999999999999999999874
No 51
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=1.3e-16 Score=124.32 Aligned_cols=208 Identities=19% Similarity=0.265 Sum_probs=147.9
Q ss_pred CCCceEEEeccCChhHHHHHHHHHHcCCCc--eeEECCC--CCCc----------------------hhHHhhCCCC---
Q 026934 3 GENEVKLHGMWASTYSKRVELALRVKGIPY--EYIEEDL--RNKS----------------------PLLLQYNSVY--- 53 (230)
Q Consensus 3 ~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~--~~~~v~~--~~~~----------------------~~~~~~~p~~--- 53 (230)
+.+++.||.+-.|||++|..+.-+++|+.= ....|.+ ..+. +-|..-+|.+
T Consensus 48 e~GRYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgR 127 (324)
T COG0435 48 EKGRYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGR 127 (324)
T ss_pred CCCeEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCc
Confidence 357899999999999999999999999851 2222222 1111 1122234422
Q ss_pred ccccEEEeCC---eeeehhHHHHHHHHHhcC----CCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHH-HhcCchhHHH
Q 026934 54 KKVPVLVHNG---KPITESYIILEYIDETWQ----NGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKL-ISSNGEEQEK 125 (230)
Q Consensus 54 ~~vP~L~~~g---~~i~eS~~I~~yL~~~~~----~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 125 (230)
-+||||.|.. .+-.||..|++-+...+. ....|+|. ..+.+++.+..++...+...+... |-...+.-++
T Consensus 128 vTVPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~--~Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYee 205 (324)
T COG0435 128 VTVPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPE--ALRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEE 205 (324)
T ss_pred eeEEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCH--HHHHHHHHHHhhhcccccCceeeecccchHHHHHH
Confidence 3799999743 556899999999976553 12227775 678888888888876665544332 2223456678
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhh-hhhhcCCCCCCCCchHHHHHHHHHhcchhh
Q 026934 126 AVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAH-EEVFGLKVLDPEKYPLLFSWVQKLNEIPLV 204 (230)
Q Consensus 126 ~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 204 (230)
+...+.+.|+.||..|+ ++.||+|+++|-||+-+|..|.++... ...+.+..-....||+|..|+..+.+.|.|
T Consensus 206 a~~~lF~~Ld~lE~~L~-----~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~pg~ 280 (324)
T COG0435 206 AVKKLFEALDKLEQILS-----ERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLPGF 280 (324)
T ss_pred HHHHHHHHHHHHHHHhh-----cCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCccc
Confidence 88899999999999999 899999999999999999999888331 111133333345699999999999999999
Q ss_pred hccCCCchHHHHHH
Q 026934 205 KGVLPPHDKLVALL 218 (230)
Q Consensus 205 ~~~~~~~~~~~~~~ 218 (230)
..+. ..+++|..+
T Consensus 281 ~~T~-df~hIK~hY 293 (324)
T COG0435 281 AETV-DFDHIKLHY 293 (324)
T ss_pred cccc-chhHhhhhh
Confidence 9987 566666544
No 52
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.71 E-value=2.8e-17 Score=105.99 Aligned_cols=65 Identities=46% Similarity=0.709 Sum_probs=56.5
Q ss_pred CChhHHHHHHHHHHcCCCceeEECCC----CCCchhHHhhCCCCccccEEEe-CCeeeehhHHHHHHHHHh
Q 026934 14 ASTYSKRVELALRVKGIPYEYIEEDL----RNKSPLLLQYNSVYKKVPVLVH-NGKPITESYIILEYIDET 79 (230)
Q Consensus 14 ~sp~~~~v~~~L~~~gi~~~~~~v~~----~~~~~~~~~~~p~~~~vP~L~~-~g~~i~eS~~I~~yL~~~ 79 (230)
+|||++|++++|+++|++|+...+.. ...+++|.+.||. |+||+|++ +|+++.||.+|++||+++
T Consensus 1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~-~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPR-GKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT--SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcC-eEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 59999999999999999999987733 4556899999999 89999995 899999999999999874
No 53
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.71 E-value=4.9e-17 Score=106.93 Aligned_cols=73 Identities=34% Similarity=0.465 Sum_probs=65.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeC-CeeeehhHHHHHHHHHhcC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHN-GKPITESYIILEYIDETWQ 81 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~-g~~i~eS~~I~~yL~~~~~ 81 (230)
|+||+++.| .+++++++|+++|++|+.+.++.. ...++++++||. +++|+|+++ |.+++||.+|++||++.++
T Consensus 1 ~~Ly~~~~~-~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~-~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGA-CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPK-GQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCC-chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCC-CCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 589999976 589999999999999999988874 457899999999 899999965 8999999999999999875
No 54
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.69 E-value=1.3e-16 Score=105.35 Aligned_cols=72 Identities=18% Similarity=0.259 Sum_probs=62.7
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhC-----CCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYN-----SVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~-----p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
+++||+++.|+.+++++++|+++|++|+.+.++.. +++.+.+ |. |+||+|++||.+|+||.||++||++++
T Consensus 1 ~~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~-g~vP~L~~~g~~l~ES~AI~~YL~~~~ 76 (79)
T cd03077 1 KPVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMF-QQVPMVEIDGMKLVQTRAILNYIAGKY 76 (79)
T ss_pred CCEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCC-CCCCEEEECCEEEeeHHHHHHHHHHHc
Confidence 47999999999999999999999999999988752 3444444 57 899999999999999999999999998
Q ss_pred C
Q 026934 81 Q 81 (230)
Q Consensus 81 ~ 81 (230)
+
T Consensus 77 ~ 77 (79)
T cd03077 77 N 77 (79)
T ss_pred C
Confidence 7
No 55
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.68 E-value=1.9e-16 Score=103.59 Aligned_cols=67 Identities=30% Similarity=0.474 Sum_probs=60.8
Q ss_pred eEEEecc-------CChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 7 VKLHGMW-------ASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 7 ~~L~~~~-------~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
++||+++ .||+|++++++|+++|++|+.+.++. .+.||. |++|+|+++|.++.||.+|++||+++
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~-------~~~~p~-g~vPvl~~~g~~l~eS~~I~~yL~~~ 73 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL-------AKRSPK-GKLPFIELNGEKIADSELIIDHLEEK 73 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc-------ccCCCC-CCCCEEEECCEEEcCHHHHHHHHHHH
Confidence 6899988 78999999999999999999987764 258998 89999999999999999999999998
Q ss_pred cC
Q 026934 80 WQ 81 (230)
Q Consensus 80 ~~ 81 (230)
++
T Consensus 74 ~~ 75 (75)
T cd03080 74 YG 75 (75)
T ss_pred cC
Confidence 74
No 56
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.67 E-value=2e-16 Score=105.11 Aligned_cols=73 Identities=21% Similarity=0.234 Sum_probs=62.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC----CchhHHh-h----CCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN----KSPLLLQ-Y----NSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~----~~~~~~~-~----~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
.+||++..++.|++++++|+++|++|+.+.+++.. ..+++.. . +|+ ++||+|+++|.+++||.||++||+
T Consensus 1 ~~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~-g~vP~L~~~g~~l~ES~AIl~YLa 79 (82)
T cd03075 1 PTLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDF-PNLPYYIDGDVKLTQSNAILRYIA 79 (82)
T ss_pred CEEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcC-CCCCEEEECCEEEeehHHHHHHHh
Confidence 37999999999999999999999999999998743 1244442 2 298 899999999999999999999998
Q ss_pred Hhc
Q 026934 78 ETW 80 (230)
Q Consensus 78 ~~~ 80 (230)
+++
T Consensus 80 ~~~ 82 (82)
T cd03075 80 RKH 82 (82)
T ss_pred hcC
Confidence 764
No 57
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.66 E-value=4.2e-16 Score=102.11 Aligned_cols=72 Identities=36% Similarity=0.525 Sum_probs=60.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeC-CeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHN-GKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~-g~~i~eS~~I~~yL~~ 78 (230)
|+|+.++.++.++++|++|+++|++|+.+.++.. .+.++|.+.||..|++|+|+++ |.+|+||.||++||++
T Consensus 1 ~~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 1 MTLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 4566666666999999999999999999999873 3348999999972499999988 9999999999999985
No 58
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.66 E-value=8.2e-16 Score=118.78 Aligned_cols=210 Identities=20% Similarity=0.240 Sum_probs=144.8
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCC----ceeEECCCCCCchh------------------------------HHhh
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIP----YEYIEEDLRNKSPL------------------------------LLQY 49 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~----~~~~~v~~~~~~~~------------------------------~~~~ 49 (230)
.+++.||..-.|||++|..+.++.+|+. +..+..-.+..... |...
T Consensus 35 kgryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~ 114 (319)
T KOG2903|consen 35 KGRYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIA 114 (319)
T ss_pred CceEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhc
Confidence 3789999999999999999999999985 22221101111111 1112
Q ss_pred CCCC---ccccEEEeCC---eeeehhHHHHHHHH---HhcCC-C--C--CCCCCCHHHHHHHHHHHHHHHhhhhHHHHH-
Q 026934 50 NSVY---KKVPVLVHNG---KPITESYIILEYID---ETWQN-G--P--RLLPQDPYQRAQIRFWASFIQQQLFGSFYK- 114 (230)
Q Consensus 50 ~p~~---~~vP~L~~~g---~~i~eS~~I~~yL~---~~~~~-~--~--~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~- 114 (230)
+|.+ -+||||.|.. .+-.||..|++.+. ..+.+ + + .|+|. ..+++++.+..|+...+...+..
T Consensus 115 ~p~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~--~L~~~Ide~N~wvy~~INNGVYk~ 192 (319)
T KOG2903|consen 115 SPNYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPS--SLRAQIDETNSWVYDKINNGVYKC 192 (319)
T ss_pred CCCCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCH--HHHHHHhhhhceecccccCceeee
Confidence 3321 2799999743 66789999999998 33332 1 1 15554 67888888888887666554433
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhh-hhhhcCCCC-CCCCchHHH
Q 026934 115 LISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAH-EEVFGLKVL-DPEKYPLLF 192 (230)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~-~~~~~~~~~-~~~~~p~l~ 192 (230)
-|-..++.-+....++.+.|+.+|..|+++ -+.|++|+++|-|||.+++.+.++.-. ...+.+..- .+++||+|.
T Consensus 193 GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~---~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~ 269 (319)
T KOG2903|consen 193 GFAEKQEAYEEEVNQLFEALDRCEDVLGKN---RKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLH 269 (319)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcc---cceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHH
Confidence 222345666788889999999999999953 234999999999999999988777321 111122211 157899999
Q ss_pred HHHHHHhc-chhhhccCCCchHHHHHHH
Q 026934 193 SWVQKLNE-IPLVKGVLPPHDKLVALLQ 219 (230)
Q Consensus 193 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 219 (230)
.|++.+.+ .|.++.+. +.++++..+-
T Consensus 270 ~~lk~iY~~~~~~~~Tt-d~~hIk~~Y~ 296 (319)
T KOG2903|consen 270 NWLKNIYWNIPGFSSTT-DFNHIKLHYY 296 (319)
T ss_pred HHHHHHHhhccchhhcc-chhHHhhhhc
Confidence 99999998 89998876 6777776554
No 59
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.66 E-value=2e-15 Score=108.42 Aligned_cols=122 Identities=20% Similarity=0.428 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYK 172 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~ 172 (230)
++++.+.|+++++ .+.+.+...+.. ++..+.....+.+.|+.+|+.|++. +++|++|+++|+||+++++.+.++.
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~---~~~yl~G~~~t~aDi~~~~~~~~~~ 76 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFYKLLGA-PSDREEKKAELRSALENLEEELTKR---GTPFFGGDSPGMVDYMIWPWFERLE 76 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhc---CCCCcCCCCccHHHHHhhHHHHHHH
Confidence 5899999999997 555555555555 5666788889999999999999831 3799999999999999999887775
Q ss_pred hhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHH
Q 026934 173 AHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQF 220 (230)
Q Consensus 173 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (230)
......|. ....+.+|+|++|++++.++|++++++...+...++++.
T Consensus 77 ~~~~~~~~-~~~~~~~p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 77 ALKLLLGY-EFPLDRFPKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHhhccc-cCCcccChHHHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 44332221 112578999999999999999999999999888877753
No 60
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.66 E-value=1.3e-15 Score=111.92 Aligned_cols=127 Identities=20% Similarity=0.205 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHh-cCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLIS-SNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
..++++++|++|....+.+.+..... .+++..+.....+.+.|+.||++|+ +++|++|+++|+|||++++.+.+
T Consensus 3 ~~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~-----~~~yl~Gd~~TlADi~l~~~l~~ 77 (142)
T cd03190 3 ELRSEIDELNEWIYDNINNGVYKAGFATTQEAYDEAVDELFEALDRLEELLS-----DRRYLLGDRLTEADIRLFTTLIR 77 (142)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHc-----cCCeeeCCCccHHHHHHHHHHHH
Confidence 46888999999999998888766543 3345566778899999999999998 78999999999999999998866
Q ss_pred hhhhh-hhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHHHHHH
Q 026934 171 YKAHE-EVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQFIKQ 223 (230)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (230)
+.... ..........+.||+|.+|++++.++|+++++....+...++++..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 78 FDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred HHHHhhhhcccccchhhhCchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 53211 111111111357999999999999999999999887778888887754
No 61
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.65 E-value=2e-15 Score=105.51 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 91 PYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 91 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
|.++++++.|+.+++..+.+.+...+...++..+.....+.+.+..||+.|+ +++|++|+++|+|||++++.+.+
T Consensus 1 p~~ra~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~t~aDi~~~~~~~~ 75 (107)
T cd03186 1 PVARARSRLLMHRIEQDWYPLVDTIEKGRKKEAEKARKELRESLLALAPVFA-----HKPYFMSEEFSLVDCALAPLLWR 75 (107)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHc-----CCCcccCCCCcHHHHHHHHHHHH
Confidence 3679999999999998888887666554455566778899999999999998 78999999999999999998755
Q ss_pred hhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhcc
Q 026934 171 YKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGV 207 (230)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~ 207 (230)
.. ..+.++ .+.+|++.+|++++.+||+++++
T Consensus 76 ~~----~~~~~~--~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 76 LP----ALGIEL--PKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HH----HcCCCC--cccchHHHHHHHHHHCCHHHHHh
Confidence 42 224333 35799999999999999999875
No 62
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.65 E-value=5.5e-16 Score=103.63 Aligned_cols=67 Identities=28% Similarity=0.438 Sum_probs=58.4
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCC---chhHHhhCCCCccccEEEeC-CeeeehhHHHHHHHHHhcC
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNK---SPLLLQYNSVYKKVPVLVHN-GKPITESYIILEYIDETWQ 81 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~---~~~~~~~~p~~~~vP~L~~~-g~~i~eS~~I~~yL~~~~~ 81 (230)
++||+|+++|++|.++|++|+.+.++.... .+++ +.||. +++|+|+++ |.+++||.+|++||+++++
T Consensus 14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~-~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGF-YTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred CcCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCC-ceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 689999999999999999999998886432 2334 78999 899999987 8999999999999999874
No 63
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.63 E-value=1.4e-15 Score=98.91 Aligned_cols=66 Identities=35% Similarity=0.480 Sum_probs=59.9
Q ss_pred eccCChhHHHHHHHHHHcCCCceeEECCCCC--CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 11 GMWASTYSKRVELALRVKGIPYEYIEEDLRN--KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 11 ~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
....||++++++++|+++|++|+.+.++... ..++|.++||. +++|+|+++|.+++||.+|++||+
T Consensus 6 ~~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~-g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 6 NKNYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPT-GKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCC-CcCCEEEECCEEEEcHHHHHHHhC
Confidence 4678999999999999999999999888743 46889999999 899999999999999999999984
No 64
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.63 E-value=1.5e-15 Score=97.27 Aligned_cols=70 Identities=44% Similarity=0.577 Sum_probs=62.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCch-hHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSP-LLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~-~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
++||+++.||+|++++++|+++|++|+.+.++...... ++.+.+|. +++|+|+++|.++.||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPL-GKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCC-CCCCEEEECCEEEEcHHHHHHHhC
Confidence 58999999999999999999999999999888754333 48889999 899999999999999999999984
No 65
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.59 E-value=6.2e-15 Score=95.55 Aligned_cols=65 Identities=32% Similarity=0.422 Sum_probs=57.9
Q ss_pred eEEEecc-------CChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 7 VKLHGMW-------ASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 7 ~~L~~~~-------~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
++||.++ .||+|++++++|+++|++|+.+.++... .||. |++|+|+++|.++.||.+|++||+++
T Consensus 1 ~~L~~~~~~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~-------~~p~-g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 1 LELYQWGRAFGLPSLSPECLKVETYLRMAGIPYEVVFSSNPW-------RSPT-GKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHhCCCceEEEecCCcc-------cCCC-cccCEEEECCEEEcCHHHHHHHHhhC
Confidence 4677776 9999999999999999999999887532 7898 89999999999999999999999874
No 66
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.58 E-value=2.5e-14 Score=103.00 Aligned_cols=114 Identities=11% Similarity=0.190 Sum_probs=86.7
Q ss_pred HHhhhhHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHhhhC-----------CCCCCcccCCCCchhhHHHHhhhhhh
Q 026934 104 IQQQLFGSFYKLISSN-GEEQEKAVEEVFEKMNVLEKGMKELL-----------PEGVPEVDGNNSGVLDILVTATFGPY 171 (230)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~-----------~~~~~~l~G~~~t~aDi~l~~~l~~~ 171 (230)
....+++.+..++.+. ++..+.....+.+.|+.||.+|+... .++++|++|+++|+|||++++.+.++
T Consensus 7 ~~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~ 86 (134)
T cd03198 7 AGEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIV 86 (134)
T ss_pred hHHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4456777777777653 45567778999999999999998410 01267999999999999999998776
Q ss_pred hhhhhh-hcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHHH
Q 026934 172 KAHEEV-FGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALLQ 219 (230)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (230)
...... .+..+ .+.+|+|.+|++++.+||+|+++++..++++..++
T Consensus 87 ~~~~~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 87 KVVAKKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HHHHHhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 432111 13332 47899999999999999999999999988886653
No 67
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.58 E-value=2.1e-14 Score=101.74 Aligned_cols=110 Identities=15% Similarity=0.190 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC---chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHH
Q 026934 89 QDPYQRAQIRFWASFIQQQLFGSFYKLISSN---GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVT 165 (230)
Q Consensus 89 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~ 165 (230)
.|+.+++++++|+.+.+..+.+.+....... .+..+.....+.+.++.||++|+ +++|++|+++|+|||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~-----~~~yl~Gd~~tlADi~l~ 76 (115)
T cd03196 2 QDPAALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQ-----QHSYLLGDKPSLADWAIF 76 (115)
T ss_pred CchHHHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHc-----cCCccCCCCccHHHHHHH
Confidence 3678999999999999999888877743321 22456778899999999999998 789999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhcc
Q 026934 166 ATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGV 207 (230)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~ 207 (230)
+.+.++... ...+ ....++|+|.+|++++.++|+++++
T Consensus 77 ~~l~~~~~~-~~~~---~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 77 PFVRQFAHV-DPKW---FDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred HHHHHHHHh-hhcc---cCcccCHHHHHHHHHHHcChHHHhh
Confidence 887665322 1111 1247899999999999999999875
No 68
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.57 E-value=1.2e-14 Score=102.50 Aligned_cols=104 Identities=23% Similarity=0.389 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcC---------chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSN---------GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~ 163 (230)
+++++++|+.+.++.+.+.+...+... +...+.....+.+.++.||+.|+ +++|++|+++|+|||+
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~-----~~~~l~G~~~t~aDi~ 76 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLA-----GGPYLLGDRFSVADAY 76 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeeeCCCcchHHHH
Confidence 578999999999988888776543321 12234567889999999999998 7889999999999999
Q ss_pred HHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 164 VTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 164 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
+++.+.++.. .+. ..+++|+|.+|++++.++|++++++
T Consensus 77 ~~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 77 LFVVLRWAPG----VGL---DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHhh----cCC---ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 9998877632 121 2457999999999999999999863
No 69
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.57 E-value=6e-14 Score=100.11 Aligned_cols=117 Identities=18% Similarity=0.322 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHHHHHhhhhHHH-HHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhh
Q 026934 90 DPYQRAQIRFWASFIQQQLFGSF-YKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATF 168 (230)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l 168 (230)
|+.+|+.+++++.+.. .+...+ ...+.+ .. .+.+.+.++.||+.|+.. ++++|++| ++|+|||++++.+
T Consensus 1 d~~~ra~~~~~~~~~~-~~~~~~~~~~~~~-~~-----~~~~~~~l~~Le~~L~~~--~~~~fl~G-~~tlADi~l~~~~ 70 (120)
T cd03203 1 DPAKREFADELLAYTD-AFTKALYSSLIKG-DP-----SAEAAAALDYIENALSKF--DDGPFFLG-QFSLVDIAYVPFI 70 (120)
T ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHhcC-Cc-----hHHHHHHHHHHHHHHHhc--CCCCCcCC-CccHHHHHHHHHH
Confidence 4678999999998843 333333 223322 11 224466788888888732 14789999 9999999999988
Q ss_pred hhhhhhh-hhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchHHHHHH
Q 026934 169 GPYKAHE-EVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALL 218 (230)
Q Consensus 169 ~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (230)
.++.... ...+.++ .+++|+|.+|++++.++|+++++.+..++..+++
T Consensus 71 ~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~~~~~~~~~~~ 119 (120)
T cd03203 71 ERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTKQDPQELLDLA 119 (120)
T ss_pred HHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHcCCHHHHHhhh
Confidence 7764321 2224433 4689999999999999999999999988877654
No 70
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.53 E-value=2e-13 Score=97.44 Aligned_cols=107 Identities=15% Similarity=0.263 Sum_probs=80.4
Q ss_pred HhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhh-hcCCCC
Q 026934 105 QQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEV-FGLKVL 183 (230)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~-~~~~~~ 183 (230)
...+.+.+..++....+. ++..+.+.+.|..||..|+. +++||+|+++|+||+++++.+.++...... .+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~----~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~- 84 (121)
T cd03201 11 GSKIFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKE----NGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV- 84 (121)
T ss_pred HHHHHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhc----CCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC-
Confidence 345556666666654333 56677899999999999983 378999999999999999987766532121 13222
Q ss_pred CCCCchHHHHHHHHHhcchhhhccCCCchHHHHHH
Q 026934 184 DPEKYPLLFSWVQKLNEIPLVKGVLPPHDKLVALL 218 (230)
Q Consensus 184 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (230)
.+.+|+|.+|++++.+||+++++.+..+++.+.+
T Consensus 85 -~~~~P~l~~w~~rl~~rps~~~t~~~~~~~~~~~ 118 (121)
T cd03201 85 -PESLTSVKSYMKALFSRESFVKTKAEKEDVIAGW 118 (121)
T ss_pred -cccchHHHHHHHHHHCCchhhhcCCCHHHHHHHh
Confidence 4789999999999999999999998887765544
No 71
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.53 E-value=1.1e-13 Score=98.52 Aligned_cols=103 Identities=18% Similarity=0.295 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHHHHHHHhhhhHHHHHH-Hh---cC-----------chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc
Q 026934 88 PQDPYQRAQIRFWASFIQQQLFGSFYKL-IS---SN-----------GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEV 152 (230)
Q Consensus 88 p~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~---~~-----------~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l 152 (230)
|.++.+++++++|+.+....+.+.+... +. .. ....+....++.+.|+.||.+|+ +++|+
T Consensus 2 ~~~~~~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l 76 (119)
T cd03189 2 PPDTAEYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLA-----KKGYF 76 (119)
T ss_pred CCCHHHHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHc-----cCCCC
Confidence 5688999999999999988888775432 11 11 11223445688999999999998 78999
Q ss_pred cCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcch
Q 026934 153 DGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIP 202 (230)
Q Consensus 153 ~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~ 202 (230)
+|+++|+|||++++.+.++... +. ..+.+|+|.+|++++.++|
T Consensus 77 ~Gd~~t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 77 VGDKLTAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred CCCCCCHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 9999999999999888776322 21 2567999999999999986
No 72
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.51 E-value=3.5e-13 Score=95.55 Aligned_cols=104 Identities=23% Similarity=0.349 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHHHhc-----C--------chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCC
Q 026934 90 DPYQRAQIRFWASFIQQQLFGSFYKLISS-----N--------GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNN 156 (230)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~ 156 (230)
|+.+++++++|+.+++..+.+.+...+.. . ....++...++.+.|+.||+.|+ +++|++|++
T Consensus 1 d~~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-----~~~~l~gd~ 75 (117)
T cd03182 1 TPLERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLA-----GSPYVAGDR 75 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhc-----CCCcccCCC
Confidence 56789999999999888877766654321 0 12235667889999999999998 778999999
Q ss_pred CchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhh
Q 026934 157 SGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLV 204 (230)
Q Consensus 157 ~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 204 (230)
+|+|||++++.+.+... .+.++ ...+|+|.+|++++.++|++
T Consensus 76 ~t~aDi~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 76 FTIADITAFVGLDFAKV----VKLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred CCHHHHHHHHHhHHHHh----cCCCC--ccccHHHHHHHHHHHhccCC
Confidence 99999999999877643 23332 46799999999999999974
No 73
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.49 E-value=2.5e-13 Score=97.76 Aligned_cols=112 Identities=16% Similarity=0.225 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLISSN-GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
.+.+.++++++.+.+.... +..++... +...+.....+.+.|..||..|++++ +++|++|+++|+||+++++.+.+
T Consensus 2 ~e~~~vd~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--~~~~l~G~~~T~ADi~l~~~~~~ 78 (126)
T cd03210 2 KEAALIDMVNDGVEDLRLK-YVRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKNN--GKGFIVGDKISFADYNLFDLLDI 78 (126)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCeeeCCCccHHHHHHHHHHHH
Confidence 4678888888877654433 33333322 33445567778899999999998420 25899999999999999998887
Q ss_pred hhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 171 YKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
+..... .. .+.+|+|.+|++++.++|++++++....
T Consensus 79 ~~~~~~----~~--~~~~P~l~~~~~rv~~~p~v~~~~~~~~ 114 (126)
T cd03210 79 HLVLAP----GC--LDAFPLLKAFVERLSARPKLKAYLESDA 114 (126)
T ss_pred HHHhCh----Hh--hhcChHHHHHHHHHHhCcHHHHHHhCcC
Confidence 743211 11 4679999999999999999999876654
No 74
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.49 E-value=2.1e-13 Score=96.74 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHH-----Hh---c---CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKL-----IS---S---NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLD 161 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~-----~~---~---~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aD 161 (230)
+++++.+|+.+....+.+.+... +. . ++...+.....+.+.++.||++|+ +++|++|+++|+||
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~t~aD 76 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLS-----KSKYLAGDSFTLAD 76 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcc-----cCcccCCCCccHHH
Confidence 47888889888776666654432 11 1 122234567788999999999998 78999999999999
Q ss_pred HHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 162 ILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 162 i~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
|++++.+.+.... +.. ...+.+|+|.+|++++.++|++++++
T Consensus 77 i~l~~~~~~~~~~----~~~-~~~~~~p~l~~~~~~~~~~p~~~~~~ 118 (118)
T cd03187 77 LSHLPYLQYLMAT----PFA-KLFDSRPHVKAWWEDISARPAWKKVL 118 (118)
T ss_pred HHHHHHHHHHHHc----cch-hhhhcCchHHHHHHHHHhCHHHHhhC
Confidence 9999988776321 111 11457999999999999999998764
No 75
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.48 E-value=1.5e-13 Score=98.09 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHH----HHhcC----c-hhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhH
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYK----LISSN----G-EEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDI 162 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~----~~~~~----~-~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi 162 (230)
.+++++++|+.++.+.+.+.+.. .+... + ...+.....+.+.|..||+.|+.. .++||+|+++|+|||
T Consensus 2 ~~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~---~~~~l~G~~~t~ADi 78 (121)
T cd03191 2 KKRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQT---AGKFCFGDEPTLADI 78 (121)
T ss_pred hhHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeecCCcCCHHHH
Confidence 57899999999998777654211 11111 1 112234466889999999999731 247999999999999
Q ss_pred HHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCC
Q 026934 163 LVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPP 210 (230)
Q Consensus 163 ~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~ 210 (230)
++++.+.+... .+. +.+.+|+|.+|++++.++|+++++.+.
T Consensus 79 ~~~~~~~~~~~----~~~---~~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 79 CLVPQVYNARR----FGV---DLSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHH----hCC---CcccCcHHHHHHHHHHhChhHHHhCcC
Confidence 99998876532 132 146799999999999999999998764
No 76
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.48 E-value=2.9e-13 Score=96.74 Aligned_cols=109 Identities=10% Similarity=0.233 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcC--chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSN--GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
++++++++++.+.+.... +..++... ....+.....+.+.+..||.+|+ +++|++|+++|+||+++++.+.+
T Consensus 2 e~~~id~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~T~aDi~l~~~~~~ 75 (121)
T cd03209 2 ERIRVDMLEQQAMDLRMG-LARICYSPDFEKLKPDYLAKLPDKLKLFSDFLG-----DRPWFAGDKITYVDFLLYEALDQ 75 (121)
T ss_pred chHHHHHHHHHHHHHHHH-HHHhhcCcchHHHHHHHHHHHHHHHHHHHHHhC-----CCCCcCCCCccHHHHHHHHHHHH
Confidence 477888888887755443 33333321 22334567778899999999998 77899999999999999998888
Q ss_pred hhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCchH
Q 026934 171 YKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHDK 213 (230)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~ 213 (230)
+... +... .+.+|+|.+|++++.++|++++++.++..
T Consensus 76 ~~~~----~~~~--~~~~P~l~~~~~rv~~~p~vk~~~~~~~~ 112 (121)
T cd03209 76 HRIF----EPDC--LDAFPNLKDFLERFEALPKISAYMKSDRF 112 (121)
T ss_pred HHHh----Cccc--cccChHHHHHHHHHHHCHHHHHHHhcccC
Confidence 7432 1111 46799999999999999999999877643
No 77
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.46 E-value=5.9e-13 Score=97.14 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcCchhHH-----HHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSNGEEQE-----KAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTAT 167 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~ 167 (230)
+.+.++++++.+.+.+.... .+....++..+ -....+.+.|..||.+|.++ +++|++|+++|+||+++++.
T Consensus 3 e~a~iD~i~~~v~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~---~~~~l~G~~~T~ADi~l~~~ 78 (137)
T cd03208 3 ERALIDMYVEGTADLMEMIL-MLPFLPPEEKEAKLALIKEKAKNRYFPVFEKVLKSH---GQDFLVGNKLSRADIHLLEA 78 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCeeeCCCCCHHHHHHHHH
Confidence 57888888888876655543 33333332222 22345678999999999742 46799999999999999998
Q ss_pred hhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 168 FGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
+.++... .... ...||+|.+|++++.++|++++++....
T Consensus 79 l~~~~~~----~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~~~~ 117 (137)
T cd03208 79 ILMVEEL----DPSL--LSDFPLLQAFKTRISNLPTIKKFLQPGS 117 (137)
T ss_pred HHHHHHh----chhh--hccChHHHHHHHHHHcCHHHHHHHhcCC
Confidence 8887432 1111 4679999999999999999999877544
No 78
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.46 E-value=1.8e-13 Score=96.42 Aligned_cols=105 Identities=19% Similarity=0.261 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHh----cC---chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLIS----SN---GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVT 165 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~ 165 (230)
+++++++|+.+.+..+.+.+...+. .+ +...+....++.+.++.+|+.|+ +++|++|+++|+|||+++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~t~aDi~l~ 75 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLA-----GRDYLAGDEYSIADIAIF 75 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHc-----cCCcccCCCCCeeeeeHH
Confidence 3688899999988777776543211 11 22344567888999999999998 789999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 166 ATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
+.+.+.... +... ...+|++.+|++++.++|++++++
T Consensus 76 ~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 76 PWVRRLEWI----GIDD--LDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred HHHHHHHhc----cccc--hhhchHHHHHHHHHhhCHHHHHhc
Confidence 988777432 2221 467999999999999999999864
No 79
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.46 E-value=4.3e-13 Score=95.37 Aligned_cols=105 Identities=23% Similarity=0.382 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHh----cCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLIS----SNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATF 168 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l 168 (230)
+++++.+|+.+....+.+.....+. ..+...+....++.+.++.||++|+ +++|++|+++|+||+++++.+
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~s~aDi~l~~~~ 76 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLE-----GSDYVAGDQLTIADLSLVATV 76 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHc-----cCCeeCCCCcCHHHHHHHHHH
Confidence 4788899998887766665544322 2234456778889999999999998 788999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 169 GPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
.++... .+. +...+|+|.+|++++.++|++++..
T Consensus 77 ~~~~~~---~~~---~~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 77 STLEAL---LPL---DLSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred HHHHHh---cCC---ChhhCchHHHHHHHHHcccchHHHH
Confidence 887431 122 1356999999999999999999854
No 80
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.45 E-value=5.4e-13 Score=95.41 Aligned_cols=111 Identities=23% Similarity=0.322 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhc-------CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISS-------NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVT 165 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~ 165 (230)
+++++++|+.+++..+.+.+...+.. +....+....++.+.|+.||+.|+ +++|++|+++|+|||+++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~-----~~~~l~G~~~siaDi~l~ 75 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLL-----KRTYLVGERLTLADIFVA 75 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHc-----cCceeccCCccHHHHHHH
Confidence 36889999999988888876544321 123345667888999999999998 788999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCCCch
Q 026934 166 ATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLPPHD 212 (230)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~ 212 (230)
+.+.+..... .+... .+.+|++.+|++++.++|++++++.+.+
T Consensus 76 ~~~~~~~~~~--~~~~~--~~~~p~l~~w~~~~~~~p~~~~~~~~~~ 118 (123)
T cd03181 76 GALLLGFTYV--FDKEW--RAKYPNVTRWFNTVVNQPIFKAVFGEVK 118 (123)
T ss_pred HHHHHHHHHH--cCHHH--HHhChHHHHHHHHHHcCHHHHHHcCCCC
Confidence 9887763211 11111 3568999999999999999999876643
No 81
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.45 E-value=6e-13 Score=91.04 Aligned_cols=95 Identities=17% Similarity=0.227 Sum_probs=74.1
Q ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc
Q 026934 73 LEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEV 152 (230)
Q Consensus 73 ~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l 152 (230)
++||++..+ |.|.++.+.+++++|++.....+.. .....+.+.+..+|.+|+ +++|+
T Consensus 1 ~r~~~~~~~----~~~~~~~~~~~vd~~~d~~~~~l~~--------------~~~~~~~~~l~~le~~L~-----~~~fl 57 (96)
T cd03200 1 ARFLYRLLG----PAPNAPNAATNIDSWVDTAIFQLAE--------------GSSKEKAAVLRALNSALG-----RSPWL 57 (96)
T ss_pred CchHHHHhc----ccCCCchHHHHHHHHHHHHHHHHhc--------------CCHHHHHHHHHHHHHHHc-----CCCcc
Confidence 478998843 8999999999999999976534321 123344567888999998 78999
Q ss_pred cCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhc
Q 026934 153 DGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNE 200 (230)
Q Consensus 153 ~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (230)
+|+++|+|||++++.+.+. +. ..+.+|+|.+|++++.+
T Consensus 58 ~Gd~~tiADi~l~~~l~~~-------~~---~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 58 VGSEFTVADIVSWCALLQT-------GL---ASAAPANVQRWLKSCEN 95 (96)
T ss_pred CCCCCCHHHHHHHHHHHHc-------cc---ccccChHHHHHHHHHHh
Confidence 9999999999999877542 11 13579999999999975
No 82
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.43 E-value=1.3e-12 Score=91.47 Aligned_cols=100 Identities=18% Similarity=0.285 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHh----cCc-----hhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLIS----SNG-----EEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~ 163 (230)
+++++++|+.+..+.+.+.+...+. ..+ ...+.....+.+.|+.||++|+ +++|++|+++|+|||+
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~-----~~~~l~g~~~t~aDi~ 76 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLA-----GRPYLAGDRFTLADIP 76 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhC-----CCCcccCCCCCHHHHH
Confidence 4788999999888888877654322 111 1234567889999999999998 7889999999999999
Q ss_pred HHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhh
Q 026934 164 VTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLV 204 (230)
Q Consensus 164 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~ 204 (230)
+++.+.... .. + .....+|+|.+|++++.++|++
T Consensus 77 ~~~~~~~~~---~~-~---~~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 77 LGCSAYRWF---EL-P---IERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHH---Hc-c---cccccCchHHHHHHHHHhCCCC
Confidence 998874331 11 1 1257899999999999999975
No 83
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.39 E-value=2.4e-12 Score=92.57 Aligned_cols=105 Identities=23% Similarity=0.324 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHH---------Hhc---CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhh
Q 026934 94 RAQIRFWASFIQQQLFGSFYKL---------ISS---NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLD 161 (230)
Q Consensus 94 ~a~~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aD 161 (230)
++++++|+.+.+..+.+.+... +.. .++..+.....+.+.++.+|++|.+ +++|++|+++|+||
T Consensus 2 ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~----~~~~l~Gd~~t~AD 77 (126)
T cd03183 2 RARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLK----DKPFLAGDEISIAD 77 (126)
T ss_pred cccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCcccCCCCCHHH
Confidence 4667888887776665543321 111 1233455677889999999998542 57899999999999
Q ss_pred HHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhc--chhhhccC
Q 026934 162 ILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNE--IPLVKGVL 208 (230)
Q Consensus 162 i~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--~~~~~~~~ 208 (230)
|++++.+.+... .+.+. ...+|+|.+|++++.+ ||+++++.
T Consensus 78 i~l~~~~~~~~~----~~~~~--~~~~p~l~~w~~~~~~~~~p~~~~~~ 120 (126)
T cd03183 78 LSAVCEIMQPEA----AGYDV--FEGRPKLAAWRKRVKEAGNPLFDEAH 120 (126)
T ss_pred HHHHHHHHHHHh----cCCcc--cccCchHHHHHHHHHHhcchhHHHHH
Confidence 999988766532 23222 4679999999999999 99998854
No 84
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.37 E-value=5.4e-12 Score=89.19 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHH-----hcC--chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHH
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLI-----SSN--GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILV 164 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l 164 (230)
.+++++++|+.++++.+.+...... ... +...+.....+.+.+..+|.+|+. +++||+| ++|+||+++
T Consensus 2 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~----~~~~l~G-~fSiAD~~l 76 (114)
T cd03195 2 RQRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPP----GAANLFG-EWCIADTDL 76 (114)
T ss_pred HhhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhc----CCCcccC-CccHHHHHH
Confidence 5799999999999999887632111 111 123456788888999999999962 5589999 699999999
Q ss_pred HhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccCC
Q 026934 165 TATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVLP 209 (230)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 209 (230)
++.+.+... .|.++ . |++.+|++++.+||++++.+.
T Consensus 77 ~~~~~~~~~----~g~~l----~-p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 77 ALMLNRLVL----NGDPV----P-ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred HHHHHHHHH----cCCCC----C-HHHHHHHHHHHCCHHHHHHHh
Confidence 999988733 35433 2 999999999999999998763
No 85
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.36 E-value=3.9e-12 Score=86.73 Aligned_cols=70 Identities=27% Similarity=0.363 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCC-CCchHHHHHHHHHhc
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDP-EKYPLLFSWVQKLNE 200 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~-~~~p~l~~~~~~~~~ 200 (230)
..+.....+.+.|+.+|..|. +++|++|+++|+||+++++.+.++...... . . +++|+|.+|++++.+
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~-----~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~----~--~~~~~P~l~~w~~~~~~ 93 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLK-----GGPYLVGDKLTIADIALFPMLDWLERLGPD----F--LFEKFPKLKKWYERMFA 93 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TSSSSSBSS-CHHHHHHHHHHHHHHHHTTT----T--THTTSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----CCCeeeccCCchhHHHHHHHHHHHHHhCCC----c--ccccCHHHHHHHHHHHc
Confidence 455678889999999999999 899999999999999999999988544322 2 3 789999999999999
Q ss_pred ch
Q 026934 201 IP 202 (230)
Q Consensus 201 ~~ 202 (230)
||
T Consensus 94 ~P 95 (95)
T PF00043_consen 94 RP 95 (95)
T ss_dssp SH
T ss_pred CC
Confidence 97
No 86
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.34 E-value=2.8e-12 Score=88.84 Aligned_cols=75 Identities=15% Similarity=0.234 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
..+....++.+.++.||++|+ +++|++|+++|+|||++++.+.+.... + . .+.+|+|++|++++.++
T Consensus 27 ~~~~~~~~~~~~l~~le~~l~-----~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~--~~~~p~l~~w~~~~~~~ 93 (103)
T cd03207 27 ARMAGFGSYDDVLAALEQALA-----KGPYLLGERFTAADVLVGSPLGWGLQF----G--L--LPERPAFDAYIARITDR 93 (103)
T ss_pred hhhhhhhhHHHHHHHHHHHHc-----cCCcccCCccCHHHHHHHHHHHHHHHc----C--C--CCCChHHHHHHHHHHcC
Confidence 345567889999999999998 788999999999999999988886321 2 1 46799999999999999
Q ss_pred hhhhccCC
Q 026934 202 PLVKGVLP 209 (230)
Q Consensus 202 ~~~~~~~~ 209 (230)
|+++++..
T Consensus 94 p~~~~~~~ 101 (103)
T cd03207 94 PAFQRAAA 101 (103)
T ss_pred HHHHHHhc
Confidence 99998764
No 87
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.34 E-value=4.6e-12 Score=81.59 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=50.7
Q ss_pred ccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 12 MWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 12 ~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
++.+++|.+++++|++.|+||+.+.... . ...+|. |+||+|++||.+|+||.+|+.||+++
T Consensus 14 ~~~~~~~~kv~~~L~elglpye~~~~~~----~--~~~~P~-GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 14 LPDNASCLAVQTFLKMCNLPFNVRCRAN----A--EFMSPS-GKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred cCCCCCHHHHHHHHHHcCCCcEEEecCC----c--cccCCC-CcccEEEECCEEEeCHHHHHHHHhcC
Confidence 4567789999999999999999884321 1 126787 89999999999999999999999763
No 88
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=99.32 E-value=9.8e-12 Score=81.92 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=64.4
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
+++++||+.++||||.+++.+|...|++|+.+.++-.....++...+.. .++|+++.||..|.++..|++||+
T Consensus 7 ~~~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~-~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 7 PESVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGA-TTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CCCEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCC-CCcCeEEECCEEEcCHHHHHHHhC
Confidence 5779999999999999999999999999999888765445566667776 799999999999999999999984
No 89
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=6.1e-12 Score=86.73 Aligned_cols=71 Identities=21% Similarity=0.432 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
..++...++.+.+..+|++|+ +++|++|+++|+|||++++.+.+... .+ ...+.+|+|.+|++++.++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~-----~~~~l~G~~~t~aDi~~~~~~~~~~~----~~---~~~~~~p~l~~~~~~~~~~ 97 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLA-----GRDWLAGDRPTIADVAVYPYVALAPE----GG---VDLEDYPAIRRWLARIEAL 97 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----cCCccCCCCCCHHHHHHHHHHHHHhc----cC---CChhhCcHHHHHHHHHHhC
Confidence 446678899999999999998 78899999999999999988765321 11 1246799999999999999
Q ss_pred hhh
Q 026934 202 PLV 204 (230)
Q Consensus 202 ~~~ 204 (230)
|++
T Consensus 98 p~~ 100 (100)
T cd03206 98 PGF 100 (100)
T ss_pred cCC
Confidence 975
No 90
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.24 E-value=2e-11 Score=78.27 Aligned_cols=67 Identities=19% Similarity=0.316 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHH
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQK 197 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 197 (230)
..++..+.+.+.++.||.+|+ +++|++|++||+||+++++.+.++...... ..+ .+.+|+|.+|+++
T Consensus 3 ~~~~~~~~~~~~l~~le~~L~-----~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~--~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 3 AVERARAQLEAALDALEDHLA-----DGPFLFGDRPSLADIALAPFLWRLRFVGPD--FDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-----TSSBTTBSS--HHHHHHHHHHHHHHHCTHT--CCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----hCCCCCCCCCCHHHHHHHHHHHHHHHhCcC--cCc--cccCHHHHHHHhC
Confidence 357788899999999999999 788999999999999999999988665321 112 4789999999986
No 91
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.20 E-value=7.9e-11 Score=82.25 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=60.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhC---C--CCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCC--CCCCCchHHHHH
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELL---P--EGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKV--LDPEKYPLLFSW 194 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~---~--~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~--~~~~~~p~l~~~ 194 (230)
..++....+.+.++.||.+|..+. + ++++||+|+++|+|||++++.+.++... +.+. +....||+|.+|
T Consensus 26 ~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l~~w 101 (111)
T cd03204 26 YLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNLEAY 101 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHHHHH
Confidence 446778899999999999998421 0 1126999999999999999999887432 2211 113579999999
Q ss_pred HHHHhcchhh
Q 026934 195 VQKLNEIPLV 204 (230)
Q Consensus 195 ~~~~~~~~~~ 204 (230)
++++.+||+|
T Consensus 102 ~~rv~aRpsf 111 (111)
T cd03204 102 FERVLQRESF 111 (111)
T ss_pred HHHHHcCCCC
Confidence 9999999985
No 92
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.20 E-value=3e-11 Score=83.09 Aligned_cols=98 Identities=26% Similarity=0.439 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhh
Q 026934 90 DPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFG 169 (230)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~ 169 (230)
++..++.+++|+++.. .+.... ......+...+.....+.+.+..++++|+.+ .++||+|++||+||+++++.|.
T Consensus 2 ~~~~~a~i~~W~~f~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~---~~~~l~G~~~T~AD~~v~~~l~ 76 (99)
T PF14497_consen 2 DPYWRALIDRWLDFSV-AFRRRK-ARLEKDEASGDFSREELPKALKILEKHLAER---GGDFLVGDKPTLADIAVFGFLA 76 (99)
T ss_dssp --TTHHHHHHHHH-GH-CCHCCH-CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHT---SSSSSSSSS--HHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccc-hhhhHH-HHHHHhhhhHHhhHHHHHHHHHHHHHHHHcC---CCeeecCCCCCHHHHHHHHHHH
Confidence 3456777788887330 000000 0001113345677889999999999999954 3339999999999999999886
Q ss_pred hhhhhhhhhcCCCCCCCCchHHHHHHHHHhc
Q 026934 170 PYKAHEEVFGLKVLDPEKYPLLFSWVQKLNE 200 (230)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (230)
.+... .. ...+|+|.+|+++|++
T Consensus 77 ~~~~~-~~-------~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 77 SLRWA-DF-------PKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHCC-HH-------TTTCHHHHHHHHHHHT
T ss_pred HHhhc-cc-------ccccHHHHHHHHhhcC
Confidence 66432 11 2579999999999974
No 93
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.19 E-value=3.5e-11 Score=83.46 Aligned_cols=95 Identities=22% Similarity=0.256 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHh------cC---chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLIS------SN---GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~ 163 (230)
+++++++|+.+..+.+.+.+..... .. ++..+....++.+.++.||..|+ +++|++|+++|+|||+
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-----~~~~l~g~~~slaDi~ 76 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLA-----GRDFLVGDALTIADIA 76 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHc-----cCccccCCCCCHHHHH
Confidence 4788999998887777766543211 11 23345678889999999999997 7889999999999999
Q ss_pred HHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHh
Q 026934 164 VTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLN 199 (230)
Q Consensus 164 l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~ 199 (230)
+++.+.++... +.+ ...+|+|.+|+++++
T Consensus 77 ~~~~~~~~~~~----~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 77 LAAYTHVADEG----GFD---LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHhcccc----CCC---hHhCccHHHHHHhhC
Confidence 99998887432 221 456999999999874
No 94
>PRK10638 glutaredoxin 3; Provisional
Probab=99.18 E-value=1.4e-10 Score=77.15 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=63.5
Q ss_pred CCCCCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 1 MEGENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 1 M~~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
|+. ++||+.+.||||++++.+|..+|++|+.+.++... ..+++.+.++. .++|+++.+|..|.+...+..+-.
T Consensus 1 m~~---v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~-~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 1 MAN---VEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGR-TTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred CCc---EEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHHHHH
Confidence 564 99999999999999999999999999999887643 45678889998 899999999999999988877653
No 95
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.17 E-value=2.3e-10 Score=80.82 Aligned_cols=76 Identities=14% Similarity=0.266 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
..+.....+.+.++.+|.+|.... +++|++|+ +|+||+++++.+.+... .+.+ ..|+|.+|++++.++
T Consensus 38 ~~~~~~~~~~~~~~~le~~l~~~~--~~~yl~Gd-~T~ADi~l~~~~~~~~~----~~~~-----~~P~l~~~~~rv~~r 105 (114)
T cd03194 38 LSEAVQADIARIEAIWAECLARFQ--GGPFLFGD-FSIADAFFAPVVTRFRT----YGLP-----LSPAAQAYVDALLAH 105 (114)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCC-CcHHHHHHHHHHHHHHH----cCCC-----CCHHHHHHHHHHHCC
Confidence 345667777888888888885321 57899999 99999999998887732 2322 139999999999999
Q ss_pred hhhhccCC
Q 026934 202 PLVKGVLP 209 (230)
Q Consensus 202 ~~~~~~~~ 209 (230)
|+++++++
T Consensus 106 Psv~~~~~ 113 (114)
T cd03194 106 PAMQEWIA 113 (114)
T ss_pred HHHHHHHh
Confidence 99998764
No 96
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.16 E-value=2.4e-10 Score=79.18 Aligned_cols=97 Identities=20% Similarity=0.180 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcC------chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHh
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSN------GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTA 166 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~ 166 (230)
++++++.++...++. ...+...+... ++........+.+.++.||++|... +++|++|+++|+||+++++
T Consensus 2 e~~~v~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~---~~~~~~G~~~s~aDi~l~~ 77 (104)
T cd03192 2 EAARVDALVDTIADL-RAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKEN---GGGYLVGDKLTWADLVVFD 77 (104)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CCCeeeCCCccHHHHHHHH
Confidence 467888888886544 44444433322 3344556788899999999999821 2789999999999999999
Q ss_pred hhhhhhhhhhhhcCCCCCCCCchHHHHHHHHH
Q 026934 167 TFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKL 198 (230)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 198 (230)
.+.++....+. . ....+|+|.+|++++
T Consensus 78 ~~~~~~~~~~~----~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 78 VLDYLLYLDPK----L-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHhhCch----h-hHHhChhHHHHHHhC
Confidence 99887443211 1 145699999999875
No 97
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.16 E-value=2.6e-09 Score=80.39 Aligned_cols=172 Identities=17% Similarity=0.213 Sum_probs=124.9
Q ss_pred CChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcCCCCCCC-CCCHH
Q 026934 14 ASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQNGPRLL-PQDPY 92 (230)
Q Consensus 14 ~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~~l~-p~~~~ 92 (230)
.-.-|..|..+|...++||..+.-.. .+ -++|- |+||.|..+.+++.|=..|+.+.+.+-.. |. ..+..
T Consensus 33 d~ascLAVqtfLrMcnLPf~v~~~~N----ae--fmSP~-G~vPllr~g~~~~aef~pIV~fVeak~~~---l~s~lsE~ 102 (257)
T KOG3027|consen 33 DNASCLAVQTFLRMCNLPFNVRQRAN----AE--FMSPG-GKVPLLRIGKTLFAEFEPIVDFVEAKGVT---LTSWLSED 102 (257)
T ss_pred cchhHHHHHHHHHHcCCCceeeecCC----cc--ccCCC-CCCceeeecchhhhhhhHHHHHHHHhccc---hhhhhhhH
Confidence 33457899999999999999875331 22 25786 89999999999999999999999888532 32 35667
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhcCc------------------------------------------hhHHHHHHHH
Q 026934 93 QRAQIRFWASFIQQQLFGSFYKLISSNG------------------------------------------EEQEKAVEEV 130 (230)
Q Consensus 93 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~ 130 (230)
+++..+..+..++..+..+=..+.+.++ ...+....++
T Consensus 103 qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~v 182 (257)
T KOG3027|consen 103 QKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQV 182 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHH
Confidence 8899998888887665543322211110 1224557888
Q ss_pred HHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhh-hhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 131 FEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHE-EVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 131 ~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
..+.+.|+..|+ .++||.|++||=+|..+|+.+..+..+. +...+.-. ...|++|-++.++++++
T Consensus 183 dkc~~aLsa~L~-----~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~-lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 183 DKCCRALSAQLG-----SQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI-LKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred HHHHHHHHHHhc-----CCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH-HHHhHHHHHHHHHHHHH
Confidence 889999999999 8999999999999999999887765431 11111000 45799999999999874
No 98
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.16 E-value=2.4e-09 Score=85.67 Aligned_cols=173 Identities=15% Similarity=0.177 Sum_probs=122.1
Q ss_pred CChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCCCCCCC-H
Q 026934 14 ASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPRLLPQD-P 91 (230)
Q Consensus 14 ~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~l~p~~-~ 91 (230)
.++-|..+.+++..++-|.+++..+..- ..|. |++|+|+ ++|+.+..-..|+.+|.....+.. +-+.. .
T Consensus 16 id~~sL~~l~y~kl~~~~l~v~~ssN~~-------~s~s-g~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~-~d~dl~~ 86 (313)
T KOG3028|consen 16 IDPDSLAALIYLKLAGAPLKVVVSSNPW-------RSPS-GKLPYLITDNGTKVAGPVKIVQFLKKNTKKYN-LDADLSA 86 (313)
T ss_pred cChhHHHHHHHHHHhCCCceeEeecCCC-------CCCC-CCCCeEEecCCceeccHHHHHHHHHHhcccCC-cCccHHH
Confidence 6788999999999999776665443221 2466 7999999 778999999999999988533222 33322 4
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHhcCc-------------------------------------------hhHHHHHH
Q 026934 92 YQRAQIRFWASFIQQQLFGSFYKLISSNG-------------------------------------------EEQEKAVE 128 (230)
Q Consensus 92 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~ 128 (230)
.+.+....++.++.+.+.+++...++-+. +..++...
T Consensus 87 kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~ 166 (313)
T KOG3028|consen 87 KQLADTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYK 166 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHH
Confidence 56788888888888888887766332110 11234456
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhh-hhhhhhhcCCCCCCCCchHHHHHHHHHhcc
Q 026934 129 EVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPY-KAHEEVFGLKVLDPEKYPLLFSWVQKLNEI 201 (230)
Q Consensus 129 ~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~-~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~ 201 (230)
...+++..|.+.|+ +++|++|++||-.|+.++..+..+ ....+...+... ....++|.+|++++...
T Consensus 167 ~Aska~~~LS~~Lg-----s~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~-l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 167 DASKALNLLSTLLG-----SKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVH-LLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHhc-----CceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHH-HHhcchHHHHHHHHHHH
Confidence 67889999999999 899999999999999999988773 221111001001 22389999999998763
No 99
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=99.14 E-value=3.6e-10 Score=73.03 Aligned_cols=71 Identities=24% Similarity=0.258 Sum_probs=60.6
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
+++||+.++||||.+++-+|...|++|+.+.++.......+...... .++|+++.||..+.++..|.+||+
T Consensus 2 ~v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~-~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 2 SVSLFTKPGCPFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGA-MTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred eEEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCC-CCcCeEEECCEEEeCHHHHHHHhC
Confidence 58999999999999999999999999999888754433445555555 689999999999999999999984
No 100
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.12 E-value=3.9e-10 Score=72.90 Aligned_cols=59 Identities=20% Similarity=0.303 Sum_probs=50.3
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
..||+|.++.++|..+|+||+.+..+.. ..+|. |++|+|+++|+.|.+|..|++||.++
T Consensus 14 s~sp~clk~~~~Lr~~~~~~~v~~~~n~-------~~sp~-gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 14 SVDPECLAVLAYLKFAGAPLKVVPSNNP-------WRSPT-GKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEecCCC-------CCCCC-CccCEEEECCEEecChHHHHHHHHHc
Confidence 4779999999999999999988754321 24577 89999999999999999999999865
No 101
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.12 E-value=1.4e-10 Score=79.24 Aligned_cols=92 Identities=24% Similarity=0.438 Sum_probs=66.5
Q ss_pred HHHHHHHHhhhhHHHHHHHhc-------CchhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhh
Q 026934 98 RFWASFIQQQLFGSFYKLISS-------NGEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGP 170 (230)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~ 170 (230)
+.|+.+....+.+.+...+.. .++..+...+.+.+.++.||++|+ +++|++|+++|+||+++++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-----~~~~~~g~~~t~aDi~~~~~l~~ 76 (100)
T cd00299 2 RAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLA-----GRPYLAGDRFSLADIALAPVLAR 76 (100)
T ss_pred hHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHc-----cCCCCCCCCcCHHHHHHHHHHHH
Confidence 345555555555544443222 133456678889999999999998 78899999999999999999998
Q ss_pred hhhhhhhhcCCCCCCCCchHHHHHHHHH
Q 026934 171 YKAHEEVFGLKVLDPEKYPLLFSWVQKL 198 (230)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 198 (230)
+.......+ . .+.+|++.+|++++
T Consensus 77 ~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 77 LDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHhhhhhh--h--hccCccHHHHHHhC
Confidence 865433211 1 46799999999874
No 102
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.05 E-value=6.6e-10 Score=79.65 Aligned_cols=68 Identities=18% Similarity=0.287 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhc
Q 026934 123 QEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNE 200 (230)
Q Consensus 123 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (230)
.+.....+.+.|+.+|++|+ +++|+.|+++|+||+++++.+.+.... .+.++ .+++|+|.+|+++|.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~-----~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLK-----GQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHc-----CCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhc
Confidence 46778889999999999998 789999999999999999998887432 13222 4689999999999976
No 103
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.02 E-value=5.5e-10 Score=75.05 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCC-C-CCCCCchHHHHHHHHHh
Q 026934 125 KAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLK-V-LDPEKYPLLFSWVQKLN 199 (230)
Q Consensus 125 ~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~-~-~~~~~~p~l~~~~~~~~ 199 (230)
....++.+.++.+|+.|+ +++|++|+++|+|||++++.+.++.... .+.. . ...+.+|+|.+|++++.
T Consensus 19 ~~~~~~~~~l~~le~~L~-----~~~yl~Gd~~t~aDi~l~~~l~~~~~~~--~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLG-----DKKFFFGDKPTSLDATVFGHLASILYAP--LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhC-----CCCccCCCCCCHHHHHHHHHHHHHHhcC--CCChHHHHHHHhCcHHHHHHHHhC
Confidence 667788999999999999 7899999999999999999887764210 0000 0 01356999999999874
No 104
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.93 E-value=4.4e-09 Score=68.06 Aligned_cols=69 Identities=23% Similarity=0.260 Sum_probs=58.1
Q ss_pred CceEEEeccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeeeehhHHHHH
Q 026934 5 NEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILE 74 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~ 74 (230)
++++||+.+.||+|.+++.+|...||+|+.+.+... ...+++.+.++. .++|+++.||..|..-....+
T Consensus 1 ~~v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~-~~vP~v~i~~~~iGg~~~~~~ 70 (73)
T cd03027 1 GRVTIYSRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGS-SVVPQIFFNEKLVGGLTDLKS 70 (73)
T ss_pred CEEEEEecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEeCHHHHHh
Confidence 368999999999999999999999999999977653 335678888888 799999999999887666543
No 105
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.84 E-value=1.2e-08 Score=67.29 Aligned_cols=61 Identities=13% Similarity=0.236 Sum_probs=48.5
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeee
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPIT 67 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~ 67 (230)
+++||+.++||+|.+++.+|..+||+|+.+.++-.....+....++. .++|+++.+|..+.
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~-~~vPvv~i~~~~~~ 62 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGF-RQLPVVIAGDLSWS 62 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-CCcCEEEECCEEEe
Confidence 48999999999999999999999999999988754322333344677 79999998775543
No 106
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.84 E-value=1.8e-08 Score=64.43 Aligned_cols=69 Identities=22% Similarity=0.185 Sum_probs=59.2
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEY 75 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~y 75 (230)
+++||+.++||+|++++.+|..+|++|+.+.+.... ...++.+.++. .++|++..+|..+.++..|.+.
T Consensus 1 ~v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~-~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 1 KVVVFSKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGW-PTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCC-CCcCEEEECCEEEecHHHHHHh
Confidence 378999999999999999999999999988776432 34667778887 7999999999999999888764
No 107
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.78 E-value=2.5e-08 Score=64.15 Aligned_cols=69 Identities=23% Similarity=0.221 Sum_probs=55.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeee--ehhHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPI--TESYIILEYI 76 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i--~eS~~I~~yL 76 (230)
++||+.++||+|++++.+|...|++|+.+.++... ..+++.+.++. ..+|+++.+|..+ .++..|-++|
T Consensus 2 i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~-~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 2 VKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQ-RGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCC-CcccEEEECCEEEeeCCHHHHHHHh
Confidence 79999999999999999999999999987765432 23456777887 7999999888877 6666666665
No 108
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.75 E-value=2.7e-08 Score=63.87 Aligned_cols=63 Identities=25% Similarity=0.338 Sum_probs=52.6
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeeeehh
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPITES 69 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i~eS 69 (230)
++++|+.++||+|.+++.+|...|++|+.+.++.. ...+++.+.+|. +++|+|+++|..+.+.
T Consensus 1 ~v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~-~~vP~i~~~~~~i~g~ 64 (73)
T cd02976 1 EVTVYTKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGY-RSVPVVVIGDEHLSGF 64 (73)
T ss_pred CEEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCC-cccCEEEECCEEEecC
Confidence 38999999999999999999999999999888753 234567788898 8999999888666543
No 109
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.75 E-value=2.2e-08 Score=71.93 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhh-hhhhcCCCCCCCCchHHHHHHHHHh
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAH-EEVFGLKVLDPEKYPLLFSWVQKLN 199 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~ 199 (230)
..++....+.+.|+.|+.+|+ +++||+|++||.+|+++++++..+... .+....... ..+||+|.+|+++|.
T Consensus 54 ~~ee~~~~~~~~l~aLs~~Lg-----~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 54 TLDQVIEEVDQCCQALSQRLG-----TQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRIE 126 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhcC
Confidence 456778888999999999999 899999999999999999988777432 100011111 457999999999974
No 110
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.74 E-value=4.8e-08 Score=71.21 Aligned_cols=68 Identities=12% Similarity=0.257 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhc
Q 026934 124 EKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNE 200 (230)
Q Consensus 124 ~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (230)
++.++.+...++.+=+.+.. +++|+.|++||+|||++++.+..+.... +. -+..++|++.+|+++|.+
T Consensus 78 ~D~r~~L~~a~~~w~~~~~~----~~~FlaGd~ptIADisvyg~l~s~e~~~---~~--~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 78 DDVREWLYDALNTWVAALGK----DRQFHGGSKPNLADLAVYGVLRSVEGHP---AF--KDMVEETKIGEWYERMDA 145 (149)
T ss_pred chHHHHHHHHHHHHHHHhcC----CCCccCCCCCCHHHHHHHHHHHHHHHhc---cc--cchhhCcCHHHHHHHHHH
Confidence 33455555555554444442 5789999999999999999988775432 22 125579999999999986
No 111
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.74 E-value=5.9e-08 Score=62.97 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=56.6
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCc-cccEEEeCCeeeehhHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYK-KVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~-~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
+++||+.+.||+|.+++-+|...|++|+.+.++.. ....++...... . .+|+++.+|..+.+...+.++-.
T Consensus 1 ~i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~-~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 1 KVEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGG-RRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCC-CCccCEEEECCEEEeChHHHHHHHh
Confidence 48999999999999999999999999999888753 122334444333 3 89999999999999988887653
No 112
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.72 E-value=8.6e-08 Score=65.63 Aligned_cols=65 Identities=18% Similarity=0.288 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHH
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKL 198 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~ 198 (230)
..+.....+.+.|+.+|++|+ +++| +++|+|||++++.+.+..... .+... .+++|+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~l~~le~~L~-----~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 34 WLERQRGKIERALDALEAELA-----KLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHHHhhh-----hCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 345678889999999999998 6788 799999999999998874321 12211 46799999999875
No 113
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=98.70 E-value=2.7e-07 Score=63.51 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHHHHHHhhhhHHHHH-----HHhcC--chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhH
Q 026934 90 DPYQRAQIRFWASFIQQQLFGSFYK-----LISSN--GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDI 162 (230)
Q Consensus 90 ~~~~~a~~~~~~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi 162 (230)
|..+|++++++..++...+.+.=.. .+... ..-.+.+...+.+++...+.+|.. +++||+| +.||||.
T Consensus 1 D~~~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~----g~~~LFG-ewsIAD~ 75 (117)
T PF14834_consen 1 DRQERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD----GGPNLFG-EWSIADA 75 (117)
T ss_dssp SHHHHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT------SSTTS-S--HHHH
T ss_pred CHHHHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc----CCCCccc-cchHHHH
Confidence 4578999999999998887764332 22221 233467777888889999999885 7899999 5999999
Q ss_pred HHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 163 LVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 163 ~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
.++++++++.. +|.. -.+.+..|.++.-++|++++.+
T Consensus 76 dlA~ml~Rl~~----~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 76 DLALMLNRLVT----YGDP-----VPERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHHHHHT----TT---------HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHHHH----cCCC-----CCHHHHHHHHHHHCCHHHHHHH
Confidence 99999999843 2422 2479999999999999999864
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=1.4e-07 Score=62.09 Aligned_cols=70 Identities=21% Similarity=0.258 Sum_probs=55.0
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC--CchhHH-hhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN--KSPLLL-QYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~--~~~~~~-~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
.+++|+.++||||.+++-+|..+|++|+.+.++... ...++. ..++. .+||+++.||..+.....+-++.
T Consensus 2 ~v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~-~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 2 NVTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQ-RTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred CEEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCC-CCcCEEEECCEEEeCcccHHHHH
Confidence 389999999999999999999999999999887654 333444 44477 79999999998777554444443
No 115
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.65 E-value=9.2e-08 Score=62.21 Aligned_cols=70 Identities=16% Similarity=0.255 Sum_probs=53.5
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCC-chhHHhhC-CCCccccEEE-eCCeeeehhH--HHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNK-SPLLLQYN-SVYKKVPVLV-HNGKPITESY--IILEYI 76 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~-~~~~~~~~-p~~~~vP~L~-~~g~~i~eS~--~I~~yL 76 (230)
+++||+.++||+|++++..|...|++|+.+.++-... .+.+..++ +. ..+|+++ ++|.++.++. .|..+|
T Consensus 1 ~v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~-~~vP~i~~~~g~~l~~~~~~~~~~~l 75 (77)
T TIGR02200 1 TITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGN-MTVPTVKFADGSFLTNPSAAQVKAKL 75 (77)
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCC-ceeCEEEECCCeEecCCCHHHHHHHh
Confidence 4899999999999999999999999999877764322 34555666 76 7999997 6777766554 344444
No 116
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=98.58 E-value=2.1e-07 Score=61.01 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=58.0
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
+++|+.+.||+|.+++-+|...|++|+.+.++... ..+++...... ..+|+++.+|..+.+...+.++-++
T Consensus 1 v~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~-~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 1 VTIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGR-RTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred CEEEecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCC-CCcCEEEECCEEEcChHHHHHHHHc
Confidence 57999999999999999999999999999887532 23445555555 6899999999999988888776654
No 117
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=98.58 E-value=1.9e-07 Score=60.13 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=45.0
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCe
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~ 64 (230)
++||+.+.||+|.+++-+|...|++|+.+.++-.....+.+..... ..||+++.+|.
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~-~~vP~v~~~g~ 57 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGF-RQVPVIVADGD 57 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCC-cccCEEEECCC
Confidence 5899999999999999999999999999888754323333334465 68999997664
No 118
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.57 E-value=5.6e-08 Score=70.80 Aligned_cols=74 Identities=16% Similarity=0.191 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhh-hhhhcCCCCCCCCchHHHHHHHHHhc
Q 026934 122 EQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAH-EEVFGLKVLDPEKYPLLFSWVQKLNE 200 (230)
Q Consensus 122 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~~~~~ 200 (230)
..++..+.+.++++.|++.|+ +++||+|+++|.+|+++++.+..+... .+...... ...++|+|.+|+++|.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~-----~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLG-----ESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHC-----CCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 346677888899999999999 889999999999999999887665321 10000001 14579999999999985
Q ss_pred c
Q 026934 201 I 201 (230)
Q Consensus 201 ~ 201 (230)
.
T Consensus 135 ~ 135 (137)
T cd03212 135 L 135 (137)
T ss_pred h
Confidence 3
No 119
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=98.56 E-value=6.9e-07 Score=61.28 Aligned_cols=72 Identities=17% Similarity=0.122 Sum_probs=58.1
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCch----hHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSP----LLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~----~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
++++++|+.++||||.+++-+|...|++|+.+.++-..... .+...... .++|++..+|..|.....+....
T Consensus 7 ~~~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~-~tvP~Vfi~g~~iGG~ddl~~l~ 82 (99)
T TIGR02189 7 EKAVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCS-PAVPAVFVGGKLVGGLENVMALH 82 (99)
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCC-CCcCeEEECCEEEcCHHHHHHHH
Confidence 46799999999999999999999999999998887543322 23444555 68999999999998887776643
No 120
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=98.54 E-value=1.4e-07 Score=58.48 Aligned_cols=59 Identities=31% Similarity=0.405 Sum_probs=49.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i 66 (230)
+++|+.+.||+|.+++-+|...|++|+.+.++.. ...+++.+.... .++|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~-~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGV-RTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSS-SSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCC-CccCEEEECCEEC
Confidence 5799999999999999999999999999988765 345556666554 6899999998765
No 121
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=98.52 E-value=7.5e-07 Score=59.30 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=60.7
Q ss_pred ceEEEeccCChhHHHHHHHHHH-----cCCCceeEECCCCC-CchhHHhhC--CCCccccEEEeCCeeeehhHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRV-----KGIPYEYIEEDLRN-KSPLLLQYN--SVYKKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~-----~gi~~~~~~v~~~~-~~~~~~~~~--p~~~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
++++|+.++||+|.+++-+|.. .|++|+.+.++-.. ..+++.... +. ..+|++..||..+.+...|.+++.
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~-~~vP~ifi~g~~igg~~~~~~~~~ 80 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPV-ETVPQIFVDQKHIGGCTDFEAYVK 80 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCC-CcCCEEEECCEEEcCHHHHHHHHH
Confidence 4999999999999999999999 89999988876431 123444332 22 379999999999999999999998
Q ss_pred HhcC
Q 026934 78 ETWQ 81 (230)
Q Consensus 78 ~~~~ 81 (230)
+.++
T Consensus 81 ~~~~ 84 (85)
T PRK11200 81 ENLG 84 (85)
T ss_pred Hhcc
Confidence 8865
No 122
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=98.50 E-value=1e-06 Score=58.00 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=59.9
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCch----hHHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSP----LLLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~----~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
++++|+.++||+|.+++-+|...+++|+.+.++...... .+.+.+.. .++|++..+|..+.+...|.++..+
T Consensus 1 ~v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~-~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 1 PVVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQ-RTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 378999999999999999999999999998887654322 34455555 5899999999999999999988754
No 123
>PHA03050 glutaredoxin; Provisional
Probab=98.49 E-value=1.3e-06 Score=60.85 Aligned_cols=70 Identities=16% Similarity=0.189 Sum_probs=57.0
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCC---CceeEECCCCCC----chhHHhhCCCCccccEEEeCCeeeehhHHHHH
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGI---PYEYIEEDLRNK----SPLLLQYNSVYKKVPVLVHNGKPITESYIILE 74 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~----~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~ 74 (230)
++++++|+.++||||.+++-+|...|+ +|+.+.++-... ..++.+.+-. .+||.++.+|..|.....+..
T Consensus 12 ~~~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~-~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 12 NNKVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGG-RTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred cCCEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCC-CCcCEEEECCEEEeChHHHHH
Confidence 367999999999999999999999999 788888774222 3456666666 689999999999988877766
No 124
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=98.45 E-value=1.3e-06 Score=58.39 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=57.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcC-----CCceeEECCCCC-CchhHHhhCC--CCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKG-----IPYEYIEEDLRN-KSPLLLQYNS--VYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~g-----i~~~~~~v~~~~-~~~~~~~~~p--~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
+++|+.++||||.+++-+|...+ ++|+.+.++... ..+++....- . ..||++..||..|.++..|..++.+
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~-~tVP~ifi~g~~igG~~dl~~~~~~ 80 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPV-ETVPQIFVDEKHVGGCTDFEQLVKE 80 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCC-CCcCeEEECCEEecCHHHHHHHHHh
Confidence 68999999999999999999984 567776665321 1233443322 2 4899999999999999999999988
Q ss_pred hcC
Q 026934 79 TWQ 81 (230)
Q Consensus 79 ~~~ 81 (230)
.++
T Consensus 81 ~~~ 83 (86)
T TIGR02183 81 NFD 83 (86)
T ss_pred ccc
Confidence 764
No 125
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=98.31 E-value=2.7e-06 Score=58.07 Aligned_cols=72 Identities=24% Similarity=0.306 Sum_probs=55.6
Q ss_pred CCceEEEec-----cCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGM-----WASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~-----~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
++++.+|.. ++||||.+++-+|...||+|+.+.+.-. ....++.+.+.. .++|.+..+|..|.....+....
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~-~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNW-PTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeChHHHHHHH
Confidence 467889964 8999999999999999999998877422 112234455555 68999999999998888777654
No 126
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=98.26 E-value=4.8e-06 Score=56.06 Aligned_cols=72 Identities=22% Similarity=0.207 Sum_probs=56.6
Q ss_pred CCceEEEec-----cCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGM-----WASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~-----~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
++++++|.. ++||||.+++-+|...|++|+.+.+.-.. ...++.+.... .++|+++.+|..|.+...+....
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~-~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNW-PTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCC-CCCCEEEECCEEEeCHHHHHHHH
Confidence 467888865 69999999999999999999999876431 12334455555 68999999999999988887754
No 127
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=98.26 E-value=8.6e-06 Score=53.74 Aligned_cols=71 Identities=23% Similarity=0.250 Sum_probs=57.4
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCC--ceeEECCCCCCchh----HHhhCCCCccccEEEeCCeeeehhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIP--YEYIEEDLRNKSPL----LLQYNSVYKKVPVLVHNGKPITESYIILEYIDE 78 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~--~~~~~v~~~~~~~~----~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~ 78 (230)
+++|+.++||+|.+++-+|...+++ |+.+.++......+ +.+.... ..+|++..+|..+.++..+.++..+
T Consensus 1 V~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~-~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 1 VVVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQ-RTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCC-CCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4789999999999999999999999 88888876533332 4444554 5899999999999999888887744
No 128
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.93 E-value=5.6e-05 Score=48.46 Aligned_cols=56 Identities=18% Similarity=0.287 Sum_probs=48.0
Q ss_pred cCChhHHHHHHHHHHcCCC---ceeEECCCCCCchhHHhhCCCCccccEEEe-CCeeeehhHHHHHHH
Q 026934 13 WASTYSKRVELALRVKGIP---YEYIEEDLRNKSPLLLQYNSVYKKVPVLVH-NGKPITESYIILEYI 76 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~-~g~~i~eS~~I~~yL 76 (230)
..+|-|.++..+|...+.+ |+.+..+... .+|. |++|+|.+ +++.+.+-..|++||
T Consensus 12 sid~ecLa~~~yl~~~~~~~~~~~vv~s~n~~-------~Spt-g~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 12 SIDPECLAVIAYLKFAGAPEQQFKVVPSNNPW-------LSPT-GELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred ccCHHHHHHHHHHHhCCCCCceEEEEEcCCCC-------cCCC-CCCCEEEECCCcEEECHHHHHHhh
Confidence 3788999999999999999 7777655221 5687 89999998 999999999999998
No 129
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.79 E-value=2.7e-05 Score=67.08 Aligned_cols=126 Identities=17% Similarity=0.234 Sum_probs=88.3
Q ss_pred cccEEEeCCeeeehhHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHH
Q 026934 55 KVPVLVHNGKPITESYIILEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKM 134 (230)
Q Consensus 55 ~vP~L~~~g~~i~eS~~I~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 134 (230)
.++.+..+|..+..+..+..|.+........|+|.+ .++.+++.|+++.... ....+...+
T Consensus 37 ~~~~~~~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~-~d~~~vd~w~~~s~~~------------------~~~~~s~~~ 97 (712)
T KOG1147|consen 37 LVDKQFLDGRKLNGATEPVVYSAALAKADPKLFGNN-IDRSQVDHWVSFSSTF------------------SFDEISSSL 97 (712)
T ss_pred hhhhhccccccccCCccchhhhhhhcccCHhHcCCc-ccHHHHHHHHHHhhhc------------------chHHHHHHH
Confidence 344444567778888888888775443333378877 9999999999987641 122445667
Q ss_pred HHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhhccC
Q 026934 135 NVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVKGVL 208 (230)
Q Consensus 135 ~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 208 (230)
..++..|. -..||+|.++|+||+++|+.+..-......... ...+.++.+|++-.+..++.+.++
T Consensus 98 ~~ld~~l~-----~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~----~k~~~~v~Rw~~~~~~~~a~~~v~ 162 (712)
T KOG1147|consen 98 SELDKFLV-----LRTFLVGNSLSIADFAIWGALHSNGMRQEQLKA----KKDYQNVERWYDLPEFQEAHNKVL 162 (712)
T ss_pred HHHHhhhh-----HHHHhhccchhHHHHHHHHHHhcccchHHHHHh----hCCchhhhhhcCcHhHHHHHHHHH
Confidence 78888888 688999999999999999988775333332221 345789999999655555555554
No 130
>PRK10824 glutaredoxin-4; Provisional
Probab=97.77 E-value=0.00012 Score=51.26 Aligned_cols=72 Identities=21% Similarity=0.244 Sum_probs=55.3
Q ss_pred CCceEEEec-----cCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGM-----WASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~-----~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
++++.+|.- ++||||.++.-+|...|++|+.+.++-. .-...+.+.+-. .+||-+..+|..|.....+....
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~-~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANW-PTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 356788865 5999999999999999999998766532 122334455555 69999999999999988777754
No 131
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=97.77 E-value=0.00012 Score=62.97 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=52.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHH-hh--------CCCCccccEEEeCCeeeehhHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLL-QY--------NSVYKKVPVLVHNGKPITESYIILE 74 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~-~~--------~p~~~~vP~L~~~g~~i~eS~~I~~ 74 (230)
+++|+.++||||.+++-+|...||+|+.+.++-.....++. .. ... .+||+++.||..|.+-..+..
T Consensus 4 V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~-~tvP~ifi~~~~igGf~~l~~ 79 (410)
T PRK12759 4 VRIYTKTNCPFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHI-RTVPQIFVGDVHIGGYDNLMA 79 (410)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCC-CccCeEEECCEEEeCchHHHH
Confidence 99999999999999999999999999998887332222322 21 244 589999999998888777765
No 132
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=0.00027 Score=48.63 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=59.0
Q ss_pred CCceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHH----hhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLL----QYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~----~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
.+++.+|+-++||||.+++-+|...|+++..+.+|-.....++. +..-. .+||.++.+|+.|.....++.+=
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~-~tvP~vFI~Gk~iGG~~dl~~lh 88 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQ-RTVPNVFIGGKFIGGASDLMALH 88 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCC-CCCCEEEECCEEEcCHHHHHHHH
Confidence 46788999999999999999999999999999988754444433 33444 58999999999999988887764
No 133
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.63 E-value=0.00027 Score=51.89 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=55.4
Q ss_pred ceEEEecc------CChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCC----CCccccEEEeCCeeeehhHHHHH
Q 026934 6 EVKLHGMW------ASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNS----VYKKVPVLVHNGKPITESYIILE 74 (230)
Q Consensus 6 ~~~L~~~~------~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p----~~~~vP~L~~~g~~i~eS~~I~~ 74 (230)
+++||..+ ++|+|.+++.+|...||+|+.+.+++.. ..+++.+... . .++|.+..+|..|.....+.+
T Consensus 1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~-~tvPqVFI~G~~IGG~del~~ 79 (147)
T cd03031 1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKA-VSLPRVFVDGRYLGGAEEVLR 79 (147)
T ss_pred CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCC-CCCCEEEECCEEEecHHHHHH
Confidence 37899988 8999999999999999999999887642 2344554422 2 489999999999998888777
Q ss_pred HH
Q 026934 75 YI 76 (230)
Q Consensus 75 yL 76 (230)
.-
T Consensus 80 L~ 81 (147)
T cd03031 80 LN 81 (147)
T ss_pred HH
Confidence 43
No 134
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.54 E-value=0.00092 Score=48.02 Aligned_cols=69 Identities=14% Similarity=0.260 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcch
Q 026934 123 QEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIP 202 (230)
Q Consensus 123 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~ 202 (230)
..+..+++...|..||.++. ......| ++|+-||.+|+.|+.+.... |..+ -|++.+|+++|.+..
T Consensus 57 t~~~i~~l~~~L~~Le~ll~-----~~~~~n~-~LS~dDi~lFp~LR~Ltivk---gi~~-----P~~V~~Y~~~~s~~t 122 (132)
T PF04399_consen 57 TPELIAELNADLEELEPLLA-----SPNAVNG-ELSIDDIILFPILRSLTIVK---GIQW-----PPKVRAYMDRMSKAT 122 (132)
T ss_dssp HHHHHHHHHHHHHHHHHH-S-----CTTBTTS-S--HHHHHHHHHHHHHCTCT---TS--------HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhc-----cccccCC-CCCHHHHHHHHHHhhhhhcc---CCcC-----CHHHHHHHHHHHHHc
Confidence 35668888888999999987 4555555 89999999999999985432 3222 479999999999876
Q ss_pred hhh
Q 026934 203 LVK 205 (230)
Q Consensus 203 ~~~ 205 (230)
.+.
T Consensus 123 ~V~ 125 (132)
T PF04399_consen 123 GVP 125 (132)
T ss_dssp T--
T ss_pred CCC
Confidence 653
No 135
>PTZ00062 glutaredoxin; Provisional
Probab=97.23 E-value=0.0014 Score=50.78 Aligned_cols=72 Identities=24% Similarity=0.171 Sum_probs=54.1
Q ss_pred CCceEEEec-----cCChhHHHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 4 ENEVKLHGM-----WASTYSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 4 ~~~~~L~~~-----~~sp~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
+.++.||.- |.||||.++.-+|...||+|+...+.-.. ....+.+.+-. .++|.+..+|..|.+...+.+..
T Consensus 112 ~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~-~TvPqVfI~G~~IGG~d~l~~l~ 189 (204)
T PTZ00062 112 NHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNW-PTYPQLYVNGELIGGHDIIKELY 189 (204)
T ss_pred cCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCC-CCCCeEEECCEEEcChHHHHHHH
Confidence 356788854 68999999999999999999987765322 12334455554 58999999999998887777643
No 136
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.17 E-value=0.004 Score=44.38 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchh
Q 026934 124 EKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPL 203 (230)
Q Consensus 124 ~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~ 203 (230)
....+++...|..++.++. .... .++++|+-||.+|+.|+.+... -|..+ -|++.+|+++|.+...
T Consensus 59 ~~~i~~l~~~L~~l~~ll~-----~~~~-~n~~ls~DDi~lFp~LR~Lt~v---kgi~~-----P~~V~~Y~~~~s~~t~ 124 (128)
T cd03199 59 PQYIAALNALLEELDPLIL-----SSEA-VNGQLSTDDIILFPILRNLTLV---KGLVF-----PPKVKAYLERMSALTK 124 (128)
T ss_pred HHHHHHHHHHHHHHHHHHc-----Cccc-cCCcCCHHHHHHHHHHhhhhhh---cCCCC-----CHHHHHHHHHHHHHhC
Confidence 4667788888999999995 3333 4558999999999999998442 24322 4799999999998755
Q ss_pred h
Q 026934 204 V 204 (230)
Q Consensus 204 ~ 204 (230)
+
T Consensus 125 V 125 (128)
T cd03199 125 V 125 (128)
T ss_pred C
Confidence 4
No 137
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=97.14 E-value=0.0018 Score=40.59 Aligned_cols=58 Identities=24% Similarity=0.211 Sum_probs=40.0
Q ss_pred ceEEEeccCChhHHHHHHHHHHc-----CCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeee
Q 026934 6 EVKLHGMWASTYSKRVELALRVK-----GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPIT 67 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~ 67 (230)
++++|+.++||+|.+++-+|... ++++..+.+ ... +++....-. ..+|++..+|..+.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~--~~~-~~l~~~~~i-~~vPti~i~~~~~~ 64 (67)
T cd02973 2 NIEVFVSPTCPYCPDAVQAANRIAALNPNISAEMIDA--AEF-PDLADEYGV-MSVPAIVINGKVEF 64 (67)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEEEc--ccC-HhHHHHcCC-cccCEEEECCEEEE
Confidence 37899999999999998888765 455554443 322 334443333 47999998887765
No 138
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=96.75 E-value=0.0022 Score=44.85 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=30.3
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDL 39 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 39 (230)
++||+.+.||+|.+++-+|...|++|+.+.+.-
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~~ 33 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIVE 33 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEecccC
Confidence 589999999999999999999999999987653
No 139
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=96.70 E-value=0.0027 Score=43.86 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=29.9
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.||+|++++-+|..+|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 57999999999999999999999999998775
No 140
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=96.56 E-value=0.011 Score=37.48 Aligned_cols=63 Identities=22% Similarity=0.306 Sum_probs=47.5
Q ss_pred CCCCCceEEEeccCChhHHHHHHHHHHcCCCceeEECCC-----------CCCchhHHhh--CCCCccccEEE-eCCeee
Q 026934 1 MEGENEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDL-----------RNKSPLLLQY--NSVYKKVPVLV-HNGKPI 66 (230)
Q Consensus 1 M~~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~-----------~~~~~~~~~~--~p~~~~vP~L~-~~g~~i 66 (230)
|++ .+||+...||-|-...-.|+-.+++|+.+.+.- .+..++|-+. |-. --+|.|. +||.+|
T Consensus 1 msk---p~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gy-iGIPall~~d~~vV 76 (85)
T COG4545 1 MSK---PKLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGY-IGIPALLTDDGKVV 76 (85)
T ss_pred CCC---ceeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCc-ccceEEEeCCCcEE
Confidence 665 799999999999999999999999999987643 2334455432 333 3689988 777776
Q ss_pred e
Q 026934 67 T 67 (230)
Q Consensus 67 ~ 67 (230)
.
T Consensus 77 l 77 (85)
T COG4545 77 L 77 (85)
T ss_pred E
Confidence 5
No 141
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=96.44 E-value=0.0053 Score=44.27 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=30.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.||+|++++-+|...||+|+.+.+.
T Consensus 2 i~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 2 VTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 78999999999999999999999999998764
No 142
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=96.25 E-value=0.022 Score=37.28 Aligned_cols=55 Identities=22% Similarity=0.349 Sum_probs=40.3
Q ss_pred ceEEEeccCChhHHHHHHHHHHcC--CCceeEECCCCCCchhHHhhCCCCccccEEEeCC
Q 026934 6 EVKLHGMWASTYSKRVELALRVKG--IPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNG 63 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~g--i~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g 63 (230)
+++||+-+.|+.|..++-.|.... .+++...+|....++.+.+.+ ..+|||..+|
T Consensus 1 ~l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~l~~~Y~---~~IPVl~~~~ 57 (81)
T PF05768_consen 1 TLTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDEDPELFEKYG---YRIPVLHIDG 57 (81)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTHHHHHHSC---TSTSEEEETT
T ss_pred CEEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCCCHHHHHHhc---CCCCEEEEcC
Confidence 479999999999999999999654 456777777765445444443 3799999766
No 143
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=96.23 E-value=0.0076 Score=42.50 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=29.6
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
++||+.+.||+|++++-+|...|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 57999999999999999999999999988764
No 144
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=96.21 E-value=0.013 Score=41.23 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=30.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.|++|++++-+|...|++|+.+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 2 IKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 78999999999999999999999999998764
No 145
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=96.02 E-value=0.038 Score=35.66 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=40.3
Q ss_pred eEEEeccCChhHHHH----HHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeee
Q 026934 7 VKLHGMWASTYSKRV----ELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPIT 67 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v----~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~ 67 (230)
+.+|+ ++||.|..+ .-++++.|++++.+.++- .++..+.+- ..+|++..||..+.
T Consensus 3 i~~~a-~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~---~~~a~~~~v--~~vPti~i~G~~~~ 61 (76)
T TIGR00412 3 IQIYG-TGCANCQMTEKNVKKAVEELGIDAEFEKVTD---MNEILEAGV--TATPGVAVDGELVI 61 (76)
T ss_pred EEEEC-CCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHHcCC--CcCCEEEECCEEEE
Confidence 67776 999999987 668888999988888771 233334443 47999998886653
No 146
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=95.96 E-value=0.029 Score=38.70 Aligned_cols=69 Identities=19% Similarity=0.196 Sum_probs=48.1
Q ss_pred CChhHHHHHHHHHHc---CCCceeEECCCCCCchhHH-hhCCCCccccEEE-eCCe-------------eeehhHHHHHH
Q 026934 14 ASTYSKRVELALRVK---GIPYEYIEEDLRNKSPLLL-QYNSVYKKVPVLV-HNGK-------------PITESYIILEY 75 (230)
Q Consensus 14 ~sp~~~~v~~~L~~~---gi~~~~~~v~~~~~~~~~~-~~~p~~~~vP~L~-~~g~-------------~i~eS~~I~~y 75 (230)
+||+|..+.-+|+.. .-..+++.|+......... .+...+..+|+|+ .+|. .|.++..|+.|
T Consensus 23 ~Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~ 102 (112)
T PF11287_consen 23 YCPHCAAIEGLLASFPDLRERLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRY 102 (112)
T ss_pred ECCchHHHHhHHhhChhhhhcccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHH
Confidence 588888888888653 2245556666644334433 3444346799999 5554 89999999999
Q ss_pred HHHhcCC
Q 026934 76 IDETWQN 82 (230)
Q Consensus 76 L~~~~~~ 82 (230)
|.++|+-
T Consensus 103 La~r~g~ 109 (112)
T PF11287_consen 103 LAERHGF 109 (112)
T ss_pred HHHHcCC
Confidence 9999973
No 147
>PRK12559 transcriptional regulator Spx; Provisional
Probab=95.80 E-value=0.024 Score=40.84 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=30.5
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDL 39 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~ 39 (230)
+++|+.+.|+.|++++-+|...|++|+.+.+.-
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~gi~~~~~di~~ 34 (131)
T PRK12559 2 VVLYTTASCASCRKAKAWLEENQIDYTEKNIVS 34 (131)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCeEEEEeeC
Confidence 789999999999999999999999999987653
No 148
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.70 E-value=0.08 Score=35.59 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=49.2
Q ss_pred eEEEeccCChh------HHHHHHHHHHcCCCceeEECCCCC-CchhHHhhC----CCCccccEEEeCCeeeehhHHHHH
Q 026934 7 VKLHGMWASTY------SKRVELALRVKGIPYEYIEEDLRN-KSPLLLQYN----SVYKKVPVLVHNGKPITESYIILE 74 (230)
Q Consensus 7 ~~L~~~~~sp~------~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~----p~~~~vP~L~~~g~~i~eS~~I~~ 74 (230)
++||..+.+.. |++++.+|.-+||+|+.+.++... ...++.+.. +. ..+|-++.+|..|.+...+..
T Consensus 2 i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~-~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 2 IKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGK-PLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred EEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCC-CCCCEEEECCEEeeCHHHHHH
Confidence 67887665543 668999999999999999987632 233444442 33 589999999999988866655
No 149
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=95.69 E-value=0.031 Score=40.29 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=30.3
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.|+.|++++-+|...||+|+.+.+.
T Consensus 2 i~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 2 IKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 78999999999999999999999999998775
No 150
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=95.64 E-value=0.032 Score=38.56 Aligned_cols=32 Identities=19% Similarity=0.373 Sum_probs=29.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.|+.|++++-+|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 58999999999999999999999999998764
No 151
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=95.38 E-value=0.028 Score=39.36 Aligned_cols=32 Identities=13% Similarity=-0.010 Sum_probs=29.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
++||+.+.|+-|++++-+|...|++|+.+.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 79999999999999999999999999988654
No 152
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=95.34 E-value=0.074 Score=34.34 Aligned_cols=57 Identities=16% Similarity=0.210 Sum_probs=38.7
Q ss_pred ceEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCe
Q 026934 6 EVKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGK 64 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~ 64 (230)
+++||+.++||+|..+.-.|.. .+..+....++.....+...+ .-. ..+|++..+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~~~~~-~~v-~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQKAME-YGI-MAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCHHHHHH-cCC-ccCCEEEECCE
Confidence 3789999999999987777643 454466666776544433333 333 47999997775
No 153
>PRK10026 arsenate reductase; Provisional
Probab=95.33 E-value=0.03 Score=40.78 Aligned_cols=35 Identities=17% Similarity=0.033 Sum_probs=31.7
Q ss_pred CCCCCceEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 1 MEGENEVKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 1 M~~~~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
|++ +++|+.+.|.=|++++-+|...|++|+.+.+-
T Consensus 1 m~~---i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 1 MSN---ITIYHNPACGTSRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred CCE---EEEEeCCCCHHHHHHHHHHHHCCCCcEEEeee
Confidence 655 99999999999999999999999999988653
No 154
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=95.22 E-value=0.073 Score=35.93 Aligned_cols=69 Identities=25% Similarity=0.352 Sum_probs=50.2
Q ss_pred CCceEEE-----eccCChhHHHHHHHHHHcC-CCceeEECCCCCCchhHH----hhCCCCccccEEEeCCeeeehhHHHH
Q 026934 4 ENEVKLH-----GMWASTYSKRVELALRVKG-IPYEYIEEDLRNKSPLLL----QYNSVYKKVPVLVHNGKPITESYIIL 73 (230)
Q Consensus 4 ~~~~~L~-----~~~~sp~~~~v~~~L~~~g-i~~~~~~v~~~~~~~~~~----~~~p~~~~vP~L~~~g~~i~eS~~I~ 73 (230)
++++.|| .+|-|+||.++--+|...| ++|.. +|.-. .++++ +.+-. -++|-|-.+|..|..|..|.
T Consensus 14 ~n~VvLFMKGtp~~P~CGFS~~~vqiL~~~g~v~~~~--vnVL~-d~eiR~~lk~~s~W-PT~PQLyi~GEfvGG~DIv~ 89 (105)
T COG0278 14 ENPVVLFMKGTPEFPQCGFSAQAVQILSACGVVDFAY--VDVLQ-DPEIRQGLKEYSNW-PTFPQLYVNGEFVGGCDIVR 89 (105)
T ss_pred cCceEEEecCCCCCCCCCccHHHHHHHHHcCCcceeE--Eeecc-CHHHHhccHhhcCC-CCCceeeECCEEeccHHHHH
Confidence 3567787 4789999999999999999 45554 44422 24444 34443 58999999999999998877
Q ss_pred HHH
Q 026934 74 EYI 76 (230)
Q Consensus 74 ~yL 76 (230)
+-.
T Consensus 90 Em~ 92 (105)
T COG0278 90 EMY 92 (105)
T ss_pred HHH
Confidence 655
No 155
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=94.56 E-value=0.1 Score=30.84 Aligned_cols=53 Identities=23% Similarity=0.228 Sum_probs=35.8
Q ss_pred eEEEeccCChhHHHHHHHHH-----HcCCCceeEECCCCCCchhHHhhCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKRVELALR-----VKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~ 60 (230)
+.+|+..+|++|++++..+. ..++.+..+.++............+. ..+|+++
T Consensus 1 l~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~ 58 (69)
T cd01659 1 LVLFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKELKRYGV-GGVPTLV 58 (69)
T ss_pred CEEEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHHHhCCC-ccccEEE
Confidence 35788899999999999988 45566665555443322222245666 7999998
No 156
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=93.94 E-value=0.13 Score=34.23 Aligned_cols=58 Identities=19% Similarity=0.092 Sum_probs=38.1
Q ss_pred ceEEEeccCChhHHHHHHHHHHc-----CCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeee
Q 026934 6 EVKLHGMWASTYSKRVELALRVK-----GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPIT 67 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~ 67 (230)
.+.+|..++||+|..+.-++... ++.+..+ +....++...+.+= ..+|+++.||..+.
T Consensus 15 ~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~v--d~~~~~e~a~~~~V--~~vPt~vidG~~~~ 77 (89)
T cd03026 15 NFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMI--DGALFQDEVEERGI--MSVPAIFLNGELFG 77 (89)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEE--EhHhCHHHHHHcCC--ccCCEEEECCEEEE
Confidence 58889999999999877766543 4555444 43333333444443 47999998887655
No 157
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=93.83 E-value=0.12 Score=36.42 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=29.7
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+-|.-|++++-+|+..||+|+.+.+-
T Consensus 3 itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 3 ITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 89999999999999999999999999988554
No 158
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=93.40 E-value=0.7 Score=29.61 Aligned_cols=57 Identities=26% Similarity=0.273 Sum_probs=37.2
Q ss_pred eEEEeccCChhHHHHHH----HHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehh
Q 026934 7 VKLHGMWASTYSKRVEL----ALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITES 69 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~----~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS 69 (230)
+++ ..+.||+|..+.- ++...|+.++.+.+ . ..++..+.+= ..+|+++.||.+++..
T Consensus 3 I~v-~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~~--~-~~~~~~~ygv--~~vPalvIng~~~~~G 63 (76)
T PF13192_consen 3 IKV-FSPGCPYCPELVQLLKEAAEELGIEVEIIDI--E-DFEEIEKYGV--MSVPALVINGKVVFVG 63 (76)
T ss_dssp EEE-ECSSCTTHHHHHHHHHHHHHHTTEEEEEEET--T-THHHHHHTT---SSSSEEEETTEEEEES
T ss_pred EEE-eCCCCCCcHHHHHHHHHHHHhcCCeEEEEEc--c-CHHHHHHcCC--CCCCEEEECCEEEEEe
Confidence 677 4666999985444 55667887776665 2 2344444433 5899999888775543
No 159
>PHA02125 thioredoxin-like protein
Probab=93.38 E-value=0.3 Score=31.19 Aligned_cols=52 Identities=25% Similarity=0.372 Sum_probs=36.5
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNG 63 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g 63 (230)
+.+|+.++||.|+.+.-.|+ ++.++...++.+. ..++....-- ..+|++. +|
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~--~~~~~~~~vd~~~-~~~l~~~~~v-~~~PT~~-~g 53 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLA--NVEYTYVDVDTDE-GVELTAKHHI-RSLPTLV-NT 53 (75)
T ss_pred EEEEECCCCHhHHHHHHHHH--HHhheEEeeeCCC-CHHHHHHcCC-ceeCeEE-CC
Confidence 67899999999998887775 3566666666544 3445544443 5799998 44
No 160
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=93.12 E-value=0.19 Score=35.94 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=30.1
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
.++||+.+-|.=|++++-+|...||+|+.+.+-
T Consensus 2 ~i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 2 TIIFYEKPGCANNARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred eEEEEeCCCCHHHHHHHHHHHHCCCCcEEEecc
Confidence 389999999999999999999999999998653
No 161
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=93.06 E-value=0.17 Score=35.29 Aligned_cols=32 Identities=19% Similarity=0.067 Sum_probs=29.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.|.=|++++-+|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999988653
No 162
>PRK10853 putative reductase; Provisional
Probab=92.80 E-value=0.19 Score=35.41 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.5
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+-|.-|++++-+|...|++|+.+.+-
T Consensus 2 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 2 VTLYGIKNCDTIKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred EEEEcCCCCHHHHHHHHHHHHcCCCcEEeehc
Confidence 78999999999999999999999999988653
No 163
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=92.64 E-value=0.21 Score=34.98 Aligned_cols=32 Identities=22% Similarity=0.067 Sum_probs=29.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
+++|+.+.|.=|++++-+|...|++|+.+.+.
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEecc
Confidence 58999999999999999999999999987653
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=90.54 E-value=1.1 Score=30.47 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=43.5
Q ss_pred eEEEeccCChh------HHHHHHHHHHcCCCceeEECCCC-CCchhHHhhC---------CCCccccEEEeCCeeeehhH
Q 026934 7 VKLHGMWASTY------SKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYN---------SVYKKVPVLVHNGKPITESY 70 (230)
Q Consensus 7 ~~L~~~~~sp~------~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~---------p~~~~vP~L~~~g~~i~eS~ 70 (230)
+++|....++. .+++..+|..++|+|+.+.+... ....++++.. +. ...|-|+.++..+.+--
T Consensus 3 I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~-~lpPqiF~~~~Y~Gdye 81 (99)
T PF04908_consen 3 IKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGK-PLPPQIFNGDEYCGDYE 81 (99)
T ss_dssp EEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT---S-EEEETTEEEEEHH
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCC-CCCCEEEeCCEEEeeHH
Confidence 88887766543 45899999999999999888763 2233344333 22 23578888998888877
Q ss_pred HHHHHHH
Q 026934 71 IILEYID 77 (230)
Q Consensus 71 ~I~~yL~ 77 (230)
.+-+.-+
T Consensus 82 ~f~ea~E 88 (99)
T PF04908_consen 82 DFEEANE 88 (99)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 6665543
No 165
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=88.69 E-value=0.95 Score=34.06 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhhCCCCC---CcccCCC-CchhhHHHHhhhhhh
Q 026934 129 EVFEKMNVLEKGMKELLPEGV---PEVDGNN-SGVLDILVTATFGPY 171 (230)
Q Consensus 129 ~~~~~l~~le~~L~~~~~~~~---~~l~G~~-~t~aDi~l~~~l~~~ 171 (230)
...+++..|++.|+ .. +|++|++ +|-+||.+++.|.-+
T Consensus 112 ~a~~~l~~L~~~L~-----~~~~~~~~f~~~~psslD~L~~ayL~l~ 153 (168)
T PF11801_consen 112 LAMECLSLLEELLG-----EWEEARYFFGDSKPSSLDCLAFAYLALL 153 (168)
T ss_pred HHHHHHHHHHHHHh-----hccccccccCCCCCCHHHHHHHHHHHHH
Confidence 45778999999998 55 8899887 999999999988665
No 166
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=86.10 E-value=2.3 Score=33.26 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=51.8
Q ss_pred CceEEE-----eccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHH
Q 026934 5 NEVKLH-----GMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYI 76 (230)
Q Consensus 5 ~~~~L~-----~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL 76 (230)
.++.|| ..|-|+|++++--.|...|++|+...|--+ .-+..++..+-. -+.|=|-.+|..+.+...|.+-+
T Consensus 139 ~~v~lFmKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdW-PTfPQlyI~GEFiGGlDIl~~m~ 215 (227)
T KOG0911|consen 139 KPVMLFMKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDW-PTFPQLYVKGEFIGGLDILKEMH 215 (227)
T ss_pred CeEEEEecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCC-CCccceeECCEeccCcHHHHHHh
Confidence 346676 468999999999999999999887765432 112223344554 58999999999999877766554
No 167
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=85.75 E-value=8 Score=25.51 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=43.0
Q ss_pred ceEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee------ehhHHH
Q 026934 6 EVKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI------TESYII 72 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i------~eS~~I 72 (230)
-+..++.++|+.|+...-.+ .+.+ ++....++.... ..+.+.--. ..+|++. .+|..+ .+...|
T Consensus 20 vvv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~~~~~v-~~~Pt~~~~~~g~~~~~~~g~~~~~~l 96 (103)
T PF00085_consen 20 VVVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDEN-KELCKKYGV-KSVPTIIFFKNGKEVKRYNGPRNAESL 96 (103)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTS-HHHHHHTTC-SSSSEEEEEETTEEEEEEESSSSHHHH
T ss_pred EEEEEeCCCCCccccccceeccccccccc-ccccchhhhhcc-chhhhccCC-CCCCEEEEEECCcEEEEEECCCCHHHH
Confidence 35667889999999766444 2333 566666666543 444443333 5899988 576443 244566
Q ss_pred HHHHHH
Q 026934 73 LEYIDE 78 (230)
Q Consensus 73 ~~yL~~ 78 (230)
.++|++
T Consensus 97 ~~~i~~ 102 (103)
T PF00085_consen 97 IEFIEK 102 (103)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 666654
No 168
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=81.98 E-value=9.2 Score=26.94 Aligned_cols=60 Identities=17% Similarity=0.299 Sum_probs=32.0
Q ss_pred eEEEeccCChhHHHHHHHH----HHcCCCceeEECCCCC----C-c---hhHHhhCCC---CccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELAL----RVKGIPYEYIEEDLRN----K-S---PLLLQYNSV---YKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L----~~~gi~~~~~~v~~~~----~-~---~~~~~~~p~---~~~vP~L~--~~g~~i 66 (230)
+.-|+.++||+|+.+.=.| ...++++-.+.++-.. . . .++.+.... ...+|+++ .+|+.+
T Consensus 27 iv~f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~v 103 (122)
T TIGR01295 27 TFFIGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQV 103 (122)
T ss_pred EEEEECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeEE
Confidence 4556899999999754444 3344554444444211 0 0 133332221 03499998 577544
No 169
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=80.77 E-value=2.4 Score=29.29 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=22.7
Q ss_pred EeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 10 HGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 10 ~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
|+.+.|.-|++++-+|...|++|+.+.+.
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEETT
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehhh
Confidence 78899999999999999999999988664
No 170
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=79.23 E-value=6.5 Score=27.22 Aligned_cols=52 Identities=12% Similarity=0.075 Sum_probs=31.4
Q ss_pred eEEE-eccCChhHHHHHHHHHHcCCC---ceeEECCCCCCchhHHhhCCCCccccEEE
Q 026934 7 VKLH-GMWASTYSKRVELALRVKGIP---YEYIEEDLRNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~-~~~~sp~~~~v~~~L~~~gi~---~~~~~v~~~~~~~~~~~~~p~~~~vP~L~ 60 (230)
+.++ +.++||+|+.++-++....-. .+...++... .+++...--- ..+|++.
T Consensus 25 vvv~f~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~-~~~l~~~~~v-~~vPt~~ 80 (113)
T cd02975 25 LVVFSSKEGCQYCEVTKQLLEELSELSDKLKLEIYDFDE-DKEKAEKYGV-ERVPTTI 80 (113)
T ss_pred EEEEeCCCCCCChHHHHHHHHHHHHhcCceEEEEEeCCc-CHHHHHHcCC-CcCCEEE
Confidence 4555 557999999877777543322 2344455443 3455544444 5899988
No 171
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=77.76 E-value=8.3 Score=25.89 Aligned_cols=52 Identities=15% Similarity=0.011 Sum_probs=30.1
Q ss_pred eEEEeccCChhHHHHHHHH--------HHcCCCceeEECCCCCC---chhHHhhCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKRVELAL--------RVKGIPYEYIEEDLRNK---SPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L--------~~~gi~~~~~~v~~~~~---~~~~~~~~p~~~~vP~L~ 60 (230)
+..|+.++|++|+...-.+ .+.+ .+....++.... ...+....-. ..+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i-~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGV-FGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCC-CCCCEEE
Confidence 5567889999999765332 2232 455555665332 2344443333 5799887
No 172
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=77.72 E-value=6.2 Score=35.64 Aligned_cols=57 Identities=21% Similarity=0.287 Sum_probs=37.7
Q ss_pred ceEEEeccCChhHHHHHH----HHHHc-CCCceeEECCCCCCchhHH-hhCCCCccccEEEeCCeeee
Q 026934 6 EVKLHGMWASTYSKRVEL----ALRVK-GIPYEYIEEDLRNKSPLLL-QYNSVYKKVPVLVHNGKPIT 67 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~----~L~~~-gi~~~~~~v~~~~~~~~~~-~~~p~~~~vP~L~~~g~~i~ 67 (230)
.+++|..+.||||-.+.- ++.+. +|..+.+.+... +++. +.+- ..||.++.||.++.
T Consensus 479 ~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~~---~~~~~~~~v--~~vP~~~i~~~~~~ 541 (555)
T TIGR03143 479 NIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSHF---PDLKDEYGI--MSVPAIVVDDQQVY 541 (555)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECccc---HHHHHhCCc--eecCEEEECCEEEE
Confidence 478888999999875443 44555 687777655432 3444 4443 47999998886544
No 173
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=77.52 E-value=14 Score=24.51 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=33.9
Q ss_pred eEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+.+|+.++|+.|....-.+.. .+-.+....+|....++-.....- ..+|++. .+|.++
T Consensus 17 lv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~~~l~~~~~v--~~vPt~~i~~~g~~v 80 (97)
T cd02949 17 LVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQEIAEAAGI--MGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCC--eeccEEEEEECCeEE
Confidence 556677899999977666644 221344455565443332233333 4799887 566554
No 174
>PRK09381 trxA thioredoxin; Provisional
Probab=76.70 E-value=20 Score=24.15 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=33.9
Q ss_pred eEEEeccCChhHHHHHHHHH----HcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALR----VKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~----~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..++.++||.|+...-.++ ..+-.+....++......-..+.+. ..+|++. .+|..+
T Consensus 25 vv~f~~~~C~~C~~~~p~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~v--~~~Pt~~~~~~G~~~ 88 (109)
T PRK09381 25 LVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGI--RGIPTLLLFKNGEVA 88 (109)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCCcEEEEEECCCChhHHHhCCC--CcCCEEEEEeCCeEE
Confidence 45567789999987653332 2222355556666543333334444 5799987 577654
No 175
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=75.98 E-value=14 Score=28.82 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=33.0
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCC---CceeEECCCCCCchhHHhhCCCCccccEEEe
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGI---PYEYIEEDLRNKSPLLLQYNSVYKKVPVLVH 61 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~ 61 (230)
.+++|+.++||+|..+.-++...-. ..+...++.... ++.....-- ..+|++..
T Consensus 136 ~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~-~~~~~~~~V-~~vPtl~i 192 (215)
T TIGR02187 136 RIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANEN-PDLAEKYGV-MSVPKIVI 192 (215)
T ss_pred EEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCCC-HHHHHHhCC-ccCCEEEE
Confidence 4677899999999987776654321 233344565443 333433332 47999983
No 176
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=75.82 E-value=18 Score=23.59 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=36.2
Q ss_pred eEEEeccCChhHHHHHHHHHH---c-CCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRV---K-GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~---~-gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..|+.++|+.|++..-.|.. . +..+....++....++-..+.+. ..+|++. .+|..+
T Consensus 18 ~v~f~~~~C~~C~~~~~~l~~l~~~~~~~i~~~~vd~~~~~~~~~~~~i--~~~Pt~~~~~~g~~~ 81 (97)
T cd02984 18 VLHFWAPWAEPCKQMNQVFEELAKEAFPSVLFLSIEAEELPEISEKFEI--TAVPTFVFFRNGTIV 81 (97)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhCCceEEEEEccccCHHHHHhcCC--ccccEEEEEECCEEE
Confidence 456678899999977665543 1 33556666665544443445555 4699887 567544
No 177
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=74.28 E-value=19 Score=22.67 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=33.1
Q ss_pred eEEEeccCChhHHHHHHHHHH-----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee
Q 026934 7 VKLHGMWASTYSKRVELALRV-----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
+..++.++|++|+...-.+.. .++.+- .++... ...+...-.. ..+|++. .+|..
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~--~i~~~~-~~~~~~~~~v-~~~P~~~~~~~g~~ 75 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFV--KVDVDE-NPELAEEYGV-RSIPTFLFFKNGKE 75 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEE--EEECCC-ChhHHHhcCc-ccccEEEEEECCEE
Confidence 566788899999987777765 555444 334333 2333333333 4799977 46653
No 178
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=72.69 E-value=8 Score=27.30 Aligned_cols=28 Identities=21% Similarity=0.457 Sum_probs=14.0
Q ss_pred cccEEE--eCCeeeehhHHHHHHHHHhcCC
Q 026934 55 KVPVLV--HNGKPITESYIILEYIDETWQN 82 (230)
Q Consensus 55 ~vP~L~--~~g~~i~eS~~I~~yL~~~~~~ 82 (230)
.-|-|. -+|.-+.|+.||++|+..-|.+
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 457785 3678899999999999988764
No 179
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=71.90 E-value=4.2 Score=36.35 Aligned_cols=72 Identities=15% Similarity=0.058 Sum_probs=42.5
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCC---CceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeeh----hHHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGI---PYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITE----SYIILEYIDE 78 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~e----S~~I~~yL~~ 78 (230)
.+++|..+.||||-.+.-++...-+ ..+...++... -+++....-. ..||.+..||..+.+ -..+++.+.+
T Consensus 119 ~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~-~~~~~~~~~v-~~VP~~~i~~~~~~~g~~~~~~~~~~~~~ 196 (517)
T PRK15317 119 HFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDGAL-FQDEVEARNI-MAVPTVFLNGEEFGQGRMTLEEILAKLDT 196 (517)
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEchh-CHhHHHhcCC-cccCEEEECCcEEEecCCCHHHHHHHHhc
Confidence 4889999999998865555433222 23333344333 3444444333 589999988766554 2345666655
Q ss_pred h
Q 026934 79 T 79 (230)
Q Consensus 79 ~ 79 (230)
.
T Consensus 197 ~ 197 (517)
T PRK15317 197 G 197 (517)
T ss_pred c
Confidence 4
No 180
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=71.66 E-value=21 Score=24.38 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=32.1
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
+..++.++|+.|+...-.+ .+.+.......++.... ..+.....- ..+|++. .+|..
T Consensus 28 lV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~-~~l~~~~~V-~~~Pt~~i~~~g~~ 91 (111)
T cd02963 28 LIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHE-RRLARKLGA-HSVPAIVGIINGQV 91 (111)
T ss_pred EEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEecccc-HHHHHHcCC-ccCCEEEEEECCEE
Confidence 5556789999998654333 33333344555555432 333333333 5799887 56654
No 181
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=70.88 E-value=4.1 Score=36.38 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=37.0
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCC---CceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeeh
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGI---PYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITE 68 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~e 68 (230)
.+++|..+.||||-.+.-++...-+ ..+...++.... +++....-- ..||.+..||..+.+
T Consensus 120 ~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~-~~~~~~~~v-~~VP~~~i~~~~~~~ 183 (515)
T TIGR03140 120 HFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDGALF-QDEVEALGI-QGVPAVFLNGEEFHN 183 (515)
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEchhC-HHHHHhcCC-cccCEEEECCcEEEe
Confidence 4889999999998876655544322 233333443333 333433333 589999988766555
No 182
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=70.50 E-value=27 Score=24.05 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=36.2
Q ss_pred eEEEeccCChhHHHHHHHHHHcCC---CceeEECCCCCCchhHHhhCCCCccccEEE--eCCeeee
Q 026934 7 VKLHGMWASTYSKRVELALRVKGI---PYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPIT 67 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi---~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~ 67 (230)
+..|+.++|+-|+.+.-.+....- ......+|.... .++.+...- ..+|++. .+|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~-~~l~~~~~v-~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAEKA-PFLVEKLNI-KVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEcccC-HHHHHHCCC-ccCCEEEEEECCEEEE
Confidence 455677999999977766643111 235556665543 344444444 5899988 5887665
No 183
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=68.70 E-value=5.2 Score=31.48 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhhhhhhhhhcCCCCCCCCchHHHHHHHHHhcchhhh
Q 026934 131 FEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPYKAHEEVFGLKVLDPEKYPLLFSWVQKLNEIPLVK 205 (230)
Q Consensus 131 ~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~ 205 (230)
...+..++..|. ++.|.-|.+++-+|+.+|..+..- + ....+++..+|++++.+.....
T Consensus 10 ~~glk~l~~sLA-----~ks~~~g~~~s~edv~vf~al~~e----p-------~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLA-----EKSYIEGYQLSKEDVVVFAALGVE----P-------QSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhh-----cccCCCCCCcccccceeehhcccC----c-------chhhhhHHHHHHHHHHHHHHHH
Confidence 456788999999 899999999999999988766332 1 0345788888888888765554
No 184
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=65.22 E-value=29 Score=26.98 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=34.0
Q ss_pred ceEEEec---cCChhHHHHHHHHHHc-----CCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee
Q 026934 6 EVKLHGM---WASTYSKRVELALRVK-----GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 6 ~~~L~~~---~~sp~~~~v~~~L~~~-----gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
.+.+|.. +|||.|+.+.=.+... ++.+..+.++.+. ..++....-- ..+|++. .+|..
T Consensus 22 ~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~-~~~l~~~~~V-~~~Pt~~~f~~g~~ 89 (215)
T TIGR02187 22 EIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPE-DKEEAEKYGV-ERVPTTIILEEGKD 89 (215)
T ss_pred EEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcc-cHHHHHHcCC-CccCEEEEEeCCee
Confidence 4667777 8999999776666443 2333344444333 3444443333 5799987 45543
No 185
>PTZ00051 thioredoxin; Provisional
Probab=64.86 E-value=35 Score=22.28 Aligned_cols=58 Identities=10% Similarity=0.099 Sum_probs=32.4
Q ss_pred eEEEeccCChhHHHHHHHHHH---cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRV---KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~---~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..|+.++|+.|+...-.+.. ....+....++... ...+.+.--. ..+|++. .+|..+
T Consensus 22 li~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~vd~~~-~~~~~~~~~v-~~~Pt~~~~~~g~~~ 84 (98)
T PTZ00051 22 IVDFYAEWCGPCKRIAPFYEECSKEYTKMVFVKVDVDE-LSEVAEKENI-TSMPTFKVFKNGSVV 84 (98)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHcCCcEEEEEECcc-hHHHHHHCCC-ceeeEEEEEeCCeEE
Confidence 456678999999976554433 21223444455433 2334433333 5799887 466544
No 186
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=64.84 E-value=26 Score=24.35 Aligned_cols=17 Identities=12% Similarity=0.198 Sum_probs=13.0
Q ss_pred ceEEEeccCChhHHHHH
Q 026934 6 EVKLHGMWASTYSKRVE 22 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~ 22 (230)
.+..|+.++||+|++..
T Consensus 17 vlv~f~a~wC~~C~~~~ 33 (125)
T cd02951 17 LLLLFSQPGCPYCDKLK 33 (125)
T ss_pred EEEEEeCCCCHHHHHHH
Confidence 35566788999999765
No 187
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=63.58 E-value=12 Score=30.38 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=50.3
Q ss_pred CceEEEeccCC----h--hHHHHHHHHHHcCCCceeEECCCCC-CchhHHhh----CCCCccccEEEeCCeeeehhHHHH
Q 026934 5 NEVKLHGMWAS----T--YSKRVELALRVKGIPYEYIEEDLRN-KSPLLLQY----NSVYKKVPVLVHNGKPITESYIIL 73 (230)
Q Consensus 5 ~~~~L~~~~~s----p--~~~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~----~p~~~~vP~L~~~g~~i~eS~~I~ 73 (230)
..+.+|..... . -|..||.+|+-.+|.|++..|++.. ..+++..+ .-. ..+|.++.+|..|.....|+
T Consensus 131 ~~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~-~~LPrVFV~GryIGgaeeV~ 209 (281)
T KOG2824|consen 131 DRVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKA-VSLPRVFVKGRYIGGAEEVV 209 (281)
T ss_pred ceEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhccccc-CccCeEEEccEEeccHHHhh
Confidence 34667754322 2 2779999999999999999999853 34444432 122 57998889999999888777
Q ss_pred HHH
Q 026934 74 EYI 76 (230)
Q Consensus 74 ~yL 76 (230)
+--
T Consensus 210 ~Ln 212 (281)
T KOG2824|consen 210 RLN 212 (281)
T ss_pred hhh
Confidence 643
No 188
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=62.88 E-value=17 Score=26.36 Aligned_cols=75 Identities=13% Similarity=0.044 Sum_probs=50.1
Q ss_pred CceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhh-CCCCccccEEEeCCeeee---hhHHHHHHHHHhc
Q 026934 5 NEVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQY-NSVYKKVPVLVHNGKPIT---ESYIILEYIDETW 80 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~-~p~~~~vP~L~~~g~~i~---eS~~I~~yL~~~~ 80 (230)
-+|+.|..|.|+.|..=.=.|+.+|+.+..+..+....-..-..+ .-. ...-+.+.+|.+|= --.+|.+.|++..
T Consensus 26 ~~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~d~~alK~~~gIp~e~-~SCHT~VI~Gy~vEGHVPa~aI~~ll~~~p 104 (149)
T COG3019 26 TEMVVYKSPNCGCCDEWAQHMKANGFEVKVVETDDFLALKRRLGIPYEM-QSCHTAVINGYYVEGHVPAEAIARLLAEKP 104 (149)
T ss_pred eeEEEEeCCCCccHHHHHHHHHhCCcEEEEeecCcHHHHHHhcCCChhh-ccccEEEEcCEEEeccCCHHHHHHHHhCCC
Confidence 469999999999998888888999998877765432111110111 112 45667888886543 3568999998876
No 189
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=61.64 E-value=41 Score=21.76 Aligned_cols=57 Identities=14% Similarity=0.164 Sum_probs=32.5
Q ss_pred eEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee
Q 026934 7 VKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
+..++.++|+.|+...-.+.. .+-.+....++......-..+.+- ..+|++. .+|.+
T Consensus 18 vi~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v--~~~P~~~~~~~g~~ 80 (101)
T TIGR01068 18 LVDFWAPWCGPCKMIAPILEELAKEYEGKVKFVKLNVDENPDIAAKYGI--RSIPTLLLFKNGKE 80 (101)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCC--CcCCEEEEEeCCcE
Confidence 445577899999876544432 222355555665443333334444 4799877 46643
No 190
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=60.72 E-value=39 Score=22.37 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=31.7
Q ss_pred eEEEeccCChhHHHHHHHHH-----HcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCe
Q 026934 7 VKLHGMWASTYSKRVELALR-----VKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~ 64 (230)
+..++.++|+.|+...-.+. +.|. +....++.... ..+.+..-- ..+|++. .+|.
T Consensus 22 ~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-~~~~~vd~~~~-~~~~~~~~v-~~~Pt~~~~~~g~ 83 (101)
T cd03003 22 FVNFYSPRCSHCHDLAPTWREFAKEMDGV-IRIGAVNCGDD-RMLCRSQGV-NSYPSLYVFPSGM 83 (101)
T ss_pred EEEEECCCChHHHHhHHHHHHHHHHhcCc-eEEEEEeCCcc-HHHHHHcCC-CccCEEEEEcCCC
Confidence 45668899999986554442 2332 45556666543 333333222 5799986 4664
No 191
>PRK10996 thioredoxin 2; Provisional
Probab=59.03 E-value=60 Score=23.23 Aligned_cols=58 Identities=9% Similarity=0.135 Sum_probs=34.5
Q ss_pred eEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..|+.++|+.|+...-.+.. .+-.+....++....+.-....+- ..+|++. .+|..+
T Consensus 56 vv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~V--~~~Ptlii~~~G~~v 119 (139)
T PRK10996 56 VIDFWAPWCGPCRNFAPIFEDVAAERSGKVRFVKVNTEAERELSARFRI--RSIPTIMIFKNGQVV 119 (139)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCHHHHHhcCC--CccCEEEEEECCEEE
Confidence 556678899999865443322 233455556666554333334444 4799987 577654
No 192
>cd02959 ERp19 Endoplasmic reticulum protein 19 (ERp19) family; ERp19 is also known as ERp18, a protein located in the ER containing one redox active TRX domain. Denaturation studies indicate that the reduced form is more stable than the oxidized form, suggesting that the protein is involved in disulfide bond formation. In vitro, ERp19 has been shown to possess thiol-disulfide oxidase activity which is dependent on the presence of both active site cysteines. Although described as protein disulfide isomerase (PDI)-like, the protein does not complement for PDI activity. ERp19 shows a wide tissue distribution but is most abundant in liver, testis, heart and kidney.
Probab=58.43 E-value=48 Score=23.02 Aligned_cols=60 Identities=8% Similarity=0.025 Sum_probs=31.4
Q ss_pred eEEEeccCChhHHHHHHHHHH------cCCCceeEECCCCCCchhHHhhCCCCccccEEE--e-CCeeee
Q 026934 7 VKLHGMWASTYSKRVELALRV------KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--H-NGKPIT 67 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~------~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~-~g~~i~ 67 (230)
+.-++.++|+.|+...-.+.. .+..|-.+.++-.. .+.-...+..++.+|++. + +|.++.
T Consensus 23 lV~F~a~WC~~C~~~~~~~~~~~~~~~~~~~fv~v~vd~~~-~~~~~~~~~~g~~vPt~~f~~~~Gk~~~ 91 (117)
T cd02959 23 MLLIHKTWCGACKALKPKFAESKEISELSHNFVMVNLEDDE-EPKDEEFSPDGGYIPRILFLDPSGDVHP 91 (117)
T ss_pred EEEEeCCcCHHHHHHHHHHhhhHHHHhhcCcEEEEEecCCC-CchhhhcccCCCccceEEEECCCCCCch
Confidence 445677899999976554433 22233333333221 111234455422499987 3 666654
No 193
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=56.12 E-value=12 Score=25.97 Aligned_cols=26 Identities=12% Similarity=0.307 Sum_probs=22.0
Q ss_pred ccEEE-eCCeeeehhHHHHHHHHHhcC
Q 026934 56 VPVLV-HNGKPITESYIILEYIDETWQ 81 (230)
Q Consensus 56 vP~L~-~~g~~i~eS~~I~~yL~~~~~ 81 (230)
+|.+. .+|.++++|..|+++.++++.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46666 799999999999999988864
No 194
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.96 E-value=42 Score=23.75 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=42.4
Q ss_pred ccCChhHHH----HHHHHHHcCCCceeEECCCCCCchhHHhhCCC-----C-ccccEEE-eC--CeeeehhHHHHHHHHH
Q 026934 12 MWASTYSKR----VELALRVKGIPYEYIEEDLRNKSPLLLQYNSV-----Y-KKVPVLV-HN--GKPITESYIILEYIDE 78 (230)
Q Consensus 12 ~~~sp~~~~----v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~-----~-~~vP~L~-~~--g~~i~eS~~I~~yL~~ 78 (230)
-+|||.|.+ +.-+|...+-+...+.++..+++-|.-..||+ . .-||+|. -+ +.-+.+.+.-...|.+
T Consensus 42 qSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~Wk~p~n~FR~d~~~lt~vPTLlrw~~~~~rL~~~q~~~~~Lve 121 (128)
T KOG3425|consen 42 QSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYWKDPANPFRKDPGILTAVPTLLRWKRQPQRLDGLQCLNDHLVE 121 (128)
T ss_pred CcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcccCCCCccccCCCceeecceeeEEcCccccchHhHhhHHHHHH
Confidence 369999885 55667767777777777776654443333332 1 2488887 33 3556666666666655
Q ss_pred hc
Q 026934 79 TW 80 (230)
Q Consensus 79 ~~ 80 (230)
.+
T Consensus 122 ~~ 123 (128)
T KOG3425|consen 122 ML 123 (128)
T ss_pred Hh
Confidence 53
No 195
>PF06110 DUF953: Eukaryotic protein of unknown function (DUF953); InterPro: IPR010357 This family consists of several hypothetical eukaryotic proteins of unknown function that are thioredoxin-like.; PDB: 1V9W_A 1WOU_A.
Probab=54.92 E-value=19 Score=25.35 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=27.5
Q ss_pred ccCChhHHHHHHH----HHHcCCCceeEECCCCCCchh------HHhhCCC--CccccEEE--eCCeeeehhHH
Q 026934 12 MWASTYSKRVELA----LRVKGIPYEYIEEDLRNKSPL------LLQYNSV--YKKVPVLV--HNGKPITESYI 71 (230)
Q Consensus 12 ~~~sp~~~~v~~~----L~~~gi~~~~~~v~~~~~~~~------~~~~~p~--~~~vP~L~--~~g~~i~eS~~ 71 (230)
-+|||.|.++.-. +....-...++.+...+++.| |+. +|. -..||+|. .++..+.|...
T Consensus 35 ~sWCPDC~~aep~v~~~f~~~~~~~~lv~v~VG~r~~Wkdp~n~fR~-~p~~~l~~IPTLi~~~~~~rL~e~e~ 107 (119)
T PF06110_consen 35 QSWCPDCVAAEPVVEKAFKKAPENARLVYVEVGDRPEWKDPNNPFRT-DPDLKLKGIPTLIRWETGERLVEEEC 107 (119)
T ss_dssp -BSSHHHHHHHHHHHHHHHH-STTEEEEEEE---HHHHC-TTSHHHH---CC---SSSEEEECTSS-EEEHHHH
T ss_pred CcccHHHHHHHHHHHHHHHhCCCCceEEEEEcCCHHHhCCCCCCceE-cceeeeeecceEEEECCCCccchhhh
Confidence 4699999976543 343333455555555443322 222 221 03599998 34455555443
No 196
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=54.73 E-value=61 Score=21.88 Aligned_cols=54 Identities=7% Similarity=0.093 Sum_probs=30.3
Q ss_pred ceEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHH-hhCCCCccccEEE
Q 026934 6 EVKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLL-QYNSVYKKVPVLV 60 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~-~~~p~~~~vP~L~ 60 (230)
-+..|+.++||.|+...-.+ .+.+..+....++.+.....+. +.... ..+|++.
T Consensus 24 vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~~~~v-~~~Pti~ 83 (109)
T cd02993 24 TLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKEELQL-KSFPTIL 83 (109)
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHhhcCC-CcCCEEE
Confidence 36677889999999654433 2333334444555443223333 22333 5799886
No 197
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=54.61 E-value=63 Score=23.77 Aligned_cols=60 Identities=10% Similarity=0.102 Sum_probs=34.4
Q ss_pred eEEEeccCChhHHHHHHHHH-----HcCCCceeEECCCCCCchhHHh-hCCC----CccccEEE--eCCeeee
Q 026934 7 VKLHGMWASTYSKRVELALR-----VKGIPYEYIEEDLRNKSPLLLQ-YNSV----YKKVPVLV--HNGKPIT 67 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~-----~~gi~~~~~~v~~~~~~~~~~~-~~p~----~~~vP~L~--~~g~~i~ 67 (230)
+..|+.++||.|+...-.+. +.+-.++...+|.+..+ ++.+ .+-. ..++|++. .+|+.+.
T Consensus 51 vV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~~-~la~~~~V~~~~~v~~~PT~ilf~~Gk~v~ 122 (152)
T cd02962 51 LVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRFP-NVAEKFRVSTSPLSKQLPTIILFQGGKEVA 122 (152)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCCH-HHHHHcCceecCCcCCCCEEEEEECCEEEE
Confidence 55678889999986654332 22333556667765433 3332 2321 02389987 6776665
No 198
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=52.92 E-value=66 Score=21.42 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=30.4
Q ss_pred eEEEeccCChhHHHHHHHHHH----cC-CCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRV----KG-IPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~g-i~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..|+.+||+.|+...-.+.. .+ -......++.+ ..+...+.+- ..+|++. .+|..+
T Consensus 21 vv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-~~~~~~~~~v--~~~Pt~~~~~~g~~~ 84 (102)
T cd02948 21 VVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-TIDTLKRYRG--KCEPTFLFYKNGELV 84 (102)
T ss_pred EEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-CHHHHHHcCC--CcCcEEEEEECCEEE
Confidence 455678899999866544422 22 12334444444 2232333333 4789876 567543
No 199
>PHA02278 thioredoxin-like protein
Probab=51.43 E-value=74 Score=21.56 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=31.0
Q ss_pred eEEEeccCChhHHHHHHHHHHc----CCCceeEECCCCCC---chhHH-hhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRVK----GIPYEYIEEDLRNK---SPLLL-QYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~----gi~~~~~~v~~~~~---~~~~~-~~~p~~~~vP~L~--~~g~~i 66 (230)
+.-|+.+||+-|+.+.=.+... ........++.+.. .+++. +.+- ..+|++. .+|..+
T Consensus 18 vV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I--~~iPT~i~fk~G~~v 85 (103)
T PHA02278 18 IVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDI--MSTPVLIGYKDGQLV 85 (103)
T ss_pred EEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCC--ccccEEEEEECCEEE
Confidence 3345678999998665444222 22223344444322 23444 3343 4799988 577655
No 200
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=51.11 E-value=64 Score=21.95 Aligned_cols=69 Identities=13% Similarity=0.106 Sum_probs=39.4
Q ss_pred EEeccCChhHHHHHHHHHHcCCCceeEECCCC-CCchhHH---hh---CCCCccccEEEeCCe-eeehhHHHHHHHHHh
Q 026934 9 LHGMWASTYSKRVELALRVKGIPYEYIEEDLR-NKSPLLL---QY---NSVYKKVPVLVHNGK-PITESYIILEYIDET 79 (230)
Q Consensus 9 L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~-~~~~~~~---~~---~p~~~~vP~L~~~g~-~i~eS~~I~~yL~~~ 79 (230)
|++...||+|....-.+......-.+..++.. ....++. .+ +.. ..+-+ ..+|. +..++.|+..-+...
T Consensus 1 v~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 1 VFYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDAD-SRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred CEECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHc-CeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 46678899999877777666543233333331 1112211 12 222 23444 55665 999999998886544
No 201
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=51.07 E-value=68 Score=21.04 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=31.7
Q ss_pred eEEEeccCChhHHHHHHHHH-----HcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCe
Q 026934 7 VKLHGMWASTYSKRVELALR-----VKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~-----~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~ 64 (230)
+..|+.++||.|+...-.+. ..+..+....++.... ..+.+..-- ..+|++. .+|.
T Consensus 20 lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~~~~~i-~~~Pt~~~~~~g~ 82 (101)
T cd02994 20 MIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQE-PGLSGRFFV-TALPTIYHAKDGV 82 (101)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCC-HhHHHHcCC-cccCEEEEeCCCC
Confidence 55678899999986553332 2233455555665432 334333233 5799987 3553
No 202
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=49.89 E-value=1.4e+02 Score=24.12 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhh--h-
Q 026934 68 ESYIILEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKE--L- 144 (230)
Q Consensus 68 eS~~I~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~- 144 (230)
|-..|-..+.+... .. .-|+|+...+.|...+...-...+...-.++. .+.+++++..-+..||..|.. .
T Consensus 5 E~qLI~~lf~RL~~-ae-~~prD~eAe~lI~~~~~~qP~A~Y~laQ~vlv-----QE~AL~~a~~ri~eLe~ql~q~~~~ 77 (247)
T PF09849_consen 5 ERQLIDDLFSRLKQ-AE-AQPRDPEAEALIAQALARQPDAPYYLAQTVLV-----QEQALKQAQARIQELEAQLQQAQAP 77 (247)
T ss_pred HHHHHHHHHHHHHh-cc-CCCCCHHHHHHHHHHHHhCCchHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 33445555555443 33 45899988888888876654444444444443 388888888889999999832 1
Q ss_pred -CCCCCCcccC
Q 026934 145 -LPEGVPEVDG 154 (230)
Q Consensus 145 -~~~~~~~l~G 154 (230)
..+.+.||.|
T Consensus 78 ~~~~~ggFL~~ 88 (247)
T PF09849_consen 78 QAQSSGGFLSG 88 (247)
T ss_pred cCCCCCcchhh
Confidence 1224566654
No 203
>PF11417 Inhibitor_G39P: Loader and inhibitor of phage G40P; InterPro: IPR024424 G39P inhibits the initiation of DNA replication by blocking G40P replicative helicase. G39P has a bipartite stricture consisting of a folded N-terminal domain and an unfolded C-terminal domain. The C-terminal is essential for helicase interaction [].; PDB: 1NO1_B.
Probab=49.25 E-value=66 Score=20.36 Aligned_cols=63 Identities=17% Similarity=0.386 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHhhhC
Q 026934 68 ESYIILEYIDETWQN--GPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGEEQEKAVEEVFEKMNVLEKGMKELL 145 (230)
Q Consensus 68 eS~~I~~yL~~~~~~--~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~ 145 (230)
|..-|+.+|...||+ .. +.+.+ .+..+..|.....+. .+..+...+..++.
T Consensus 5 E~~~ll~~I~~aYP~~~~~-f~~~~--~k~~v~~W~~~L~d~---------------------~ye~v~~al~~~i~--- 57 (71)
T PF11417_consen 5 ETAKLLKLIKAAYPQWAGN-FKPTD--SKETVDLWYDMLKDY---------------------DYEIVMKALKKHIA--- 57 (71)
T ss_dssp HHHHHHHHHHHHST---TT----ST--HHHHHHHHHHHHTTS----------------------HHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHCCcchhc-cchhh--HHHHHHHHHHHHHhC---------------------CHHHHHHHHHHHHH---
Confidence 567789999999984 23 55543 245566666665543 22344556667777
Q ss_pred CCCCCcccCCCCchhhHH
Q 026934 146 PEGVPEVDGNNSGVLDIL 163 (230)
Q Consensus 146 ~~~~~~l~G~~~t~aDi~ 163 (230)
.++| -||+||+.
T Consensus 58 --~~kf----PPsiaeii 69 (71)
T PF11417_consen 58 --TNKF----PPSIAEII 69 (71)
T ss_dssp --H-SS-------GGGG-
T ss_pred --hCCC----CcCHHHHh
Confidence 4666 68888874
No 204
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=48.83 E-value=51 Score=20.72 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=21.5
Q ss_pred cccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 55 KVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 55 ~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
+-||+..+| ..+|-.+|.+||.+..
T Consensus 15 ~dPVi~~~G-~tyer~~I~~~l~~~~ 39 (73)
T PF04564_consen 15 RDPVILPSG-HTYERSAIERWLEQNG 39 (73)
T ss_dssp SSEEEETTS-EEEEHHHHHHHHCTTS
T ss_pred hCceeCCcC-CEEcHHHHHHHHHcCC
Confidence 679998888 8899999999998843
No 205
>KOG0190 consensus Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) [Posttranslational modification, protein turnover, chaperones]
Probab=48.70 E-value=79 Score=28.20 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=49.9
Q ss_pred eEEEeccCChhHHH-------HHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee------eehhHH
Q 026934 7 VKLHGMWASTYSKR-------VELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP------ITESYI 71 (230)
Q Consensus 7 ~~L~~~~~sp~~~~-------v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~------i~eS~~ 71 (230)
+..|+-|||++|.+ +.-.|.+.|-+..+..||.... ..+....-. ...|+|. .||.. ..+...
T Consensus 46 lVeFYAPWCghck~LaPey~kAA~~Lke~~s~i~LakVDat~~-~~~~~~y~v-~gyPTlkiFrnG~~~~~Y~G~r~adg 123 (493)
T KOG0190|consen 46 LVEFYAPWCGHCKALAPEYEKAATELKEEGSPVKLAKVDATEE-SDLASKYEV-RGYPTLKIFRNGRSAQDYNGPREADG 123 (493)
T ss_pred EEEEEchhhhhhhhhCcHHHHHHHHhhccCCCceeEEeecchh-hhhHhhhcC-CCCCeEEEEecCCcceeccCcccHHH
Confidence 45668899999874 4455555666888888876433 333433333 4689887 57754 456778
Q ss_pred HHHHHHHhcCCC
Q 026934 72 ILEYIDETWQNG 83 (230)
Q Consensus 72 I~~yL~~~~~~~ 83 (230)
|+.||-++.+..
T Consensus 124 Iv~wl~kq~gPa 135 (493)
T KOG0190|consen 124 IVKWLKKQSGPA 135 (493)
T ss_pred HHHHHHhccCCC
Confidence 999998887643
No 206
>PF12290 DUF3802: Protein of unknown function (DUF3802); InterPro: IPR020979 This family of proteins is found in bacteria and are typically between 114 and 143 amino acids in length. There is a conserved KNLFD sequence motif. The annotation with this family suggests that it may be the B subunit of bacterial type IIA DNA topoisomerase but there is no evidence to support this annotation.
Probab=48.26 E-value=63 Score=22.45 Aligned_cols=84 Identities=14% Similarity=0.147 Sum_probs=49.8
Q ss_pred HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcCch----hHHHHHHHHHHHHHHHHHHHhhhC
Q 026934 70 YIILEYIDETWQNGPRLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSNGE----EQEKAVEEVFEKMNVLEKGMKELL 145 (230)
Q Consensus 70 ~~I~~yL~~~~~~~~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~le~~L~~~~ 145 (230)
.+.++||.+..+ |+-.......-...+.+.+.+.+...+...+..+++ .+....+....++.-|++.|+.
T Consensus 9 ~~LI~yLte~L~----lFe~~~~~~~~~~Tv~d~vee~ia~~im~vc~Qnp~L~~~~R~~iirE~Daiv~DLeEVLa~-- 82 (113)
T PF12290_consen 9 DALIEYLTENLS----LFESSQSGDTGDETVEDVVEEQIASQIMAVCEQNPELEFSQRFQIIREADAIVYDLEEVLAS-- 82 (113)
T ss_pred HHHHHHHHHhHH----HhcCCCCCCcccchHHHHHHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 468899988765 332111222222334455666666666666665543 3445567777788889999973
Q ss_pred CCCCCcccCCCCchhhHHHH
Q 026934 146 PEGVPEVDGNNSGVLDILVT 165 (230)
Q Consensus 146 ~~~~~~l~G~~~t~aDi~l~ 165 (230)
..+..+|-.-+.+.
T Consensus 83 ------V~~~~aT~eQ~~Fi 96 (113)
T PF12290_consen 83 ------VWNQKATNEQIAFI 96 (113)
T ss_pred ------HHcCCCCHHHHHHH
Confidence 22345676666644
No 207
>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.
Probab=48.23 E-value=75 Score=20.70 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=31.2
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcC--CCceeEECCCCCCchhHHhhCCCCccccEEE--eCCe
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKG--IPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~g--i~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~ 64 (230)
+..|+.++|+.|+...-.+ .+.+ -.+....++......-....+. ..+|++. .+|.
T Consensus 20 lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v--~~~Pt~~~~~~g~ 84 (102)
T cd03005 20 FVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHRELCSEFQV--RGYPTLLLFKDGE 84 (102)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCChhhHhhcCC--CcCCEEEEEeCCC
Confidence 5566788999998653322 3333 2345555665443322233343 4799876 4554
No 208
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=47.68 E-value=51 Score=22.49 Aligned_cols=57 Identities=19% Similarity=0.269 Sum_probs=33.1
Q ss_pred eEEEeccCChhHHHHHHHHHH-----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeeeeh
Q 026934 7 VKLHGMWASTYSKRVELALRV-----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPITE 68 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~e 68 (230)
+..|+.++|+.|+.+.-.++. .++ ....++.... .+.+..-- ..+|++. .+|..+..
T Consensus 28 vv~F~a~~c~~C~~l~~~l~~la~~~~~v--~f~~vd~~~~--~l~~~~~i-~~~Pt~~~f~~G~~v~~ 91 (113)
T cd02957 28 VVHFYEPGFPRCKILDSHLEELAAKYPET--KFVKINAEKA--FLVNYLDI-KVLPTLLVYKNGELIDN 91 (113)
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHCCCc--EEEEEEchhh--HHHHhcCC-CcCCEEEEEECCEEEEE
Confidence 445678899999866555432 333 3345554432 44433222 4799987 57866554
No 209
>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.
Probab=45.25 E-value=1.1e+02 Score=21.92 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=36.1
Q ss_pred eEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCC-chhHH-hhCCCCccccEEE-e--CCeeee------hhHH
Q 026934 7 VKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNK-SPLLL-QYNSVYKKVPVLV-H--NGKPIT------ESYI 71 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~-~~~~~-~~~p~~~~vP~L~-~--~g~~i~------eS~~ 71 (230)
+..|+.+||+.|+...-.+.. .+-.+.++.++.... ...+. ..+- ..+|+++ . +|.++. ....
T Consensus 24 vV~F~A~WC~~C~~~~p~l~~l~~~~~~~~~~v~v~vd~~~~~~~~~~~~V--~~iPt~v~~~~~G~~v~~~~G~~~~~~ 101 (142)
T cd02950 24 LVEFYADWCTVCQEMAPDVAKLKQKYGDQVNFVMLNVDNPKWLPEIDRYRV--DGIPHFVFLDREGNEEGQSIGLQPKQV 101 (142)
T ss_pred EEEEECCcCHHHHHhHHHHHHHHHHhccCeeEEEEEcCCcccHHHHHHcCC--CCCCEEEEECCCCCEEEEEeCCCCHHH
Confidence 445567899999866544432 222234444444321 12333 3333 4699877 3 565542 2233
Q ss_pred HHHHHHHhc
Q 026934 72 ILEYIDETW 80 (230)
Q Consensus 72 I~~yL~~~~ 80 (230)
|...|++..
T Consensus 102 l~~~l~~l~ 110 (142)
T cd02950 102 LAQNLDALV 110 (142)
T ss_pred HHHHHHHHH
Confidence 555555544
No 210
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=44.81 E-value=85 Score=20.30 Aligned_cols=57 Identities=19% Similarity=0.124 Sum_probs=32.8
Q ss_pred eEEEeccCChhHHHHHHHHHHc----CCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee
Q 026934 7 VKLHGMWASTYSKRVELALRVK----GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~----gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
+..++.++|+.|+...-.+... +-.+....++.... ..+.+.-.- ..+|++. .+|..
T Consensus 16 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~~~~~i-~~~Pt~~~~~~g~~ 78 (96)
T cd02956 16 VVDFWAPRSPPSKELLPLLERLAEEYQGQFVLAKVNCDAQ-PQIAQQFGV-QALPTVYLFAAGQP 78 (96)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhCCcEEEEEEeccCC-HHHHHHcCC-CCCCEEEEEeCCEE
Confidence 4445778999998765555332 21344455665543 344433333 4799988 56654
No 211
>PTZ00102 disulphide isomerase; Provisional
Probab=44.28 E-value=1.4e+02 Score=26.04 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=43.2
Q ss_pred eEEEeccCChhHHHHHHHH-------HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee-----ehhHHH
Q 026934 7 VKLHGMWASTYSKRVELAL-------RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI-----TESYII 72 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-------~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i-----~eS~~I 72 (230)
+..++.+||++|++..=.+ ...+-++....++......-..+.+- ..+|++. .+|..+ .....|
T Consensus 53 lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i--~~~Pt~~~~~~g~~~~y~g~~~~~~l 130 (477)
T PTZ00102 53 LVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGV--RGYPTIKFFNKGNPVNYSGGRTADGI 130 (477)
T ss_pred EEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCC--CcccEEEEEECCceEEecCCCCHHHH
Confidence 5667889999998654211 22233455566665443322233343 4699886 455332 356679
Q ss_pred HHHHHHhcC
Q 026934 73 LEYIDETWQ 81 (230)
Q Consensus 73 ~~yL~~~~~ 81 (230)
.+||.+..+
T Consensus 131 ~~~l~~~~~ 139 (477)
T PTZ00102 131 VSWIKKLTG 139 (477)
T ss_pred HHHHHHhhC
Confidence 999988765
No 212
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=41.17 E-value=1e+02 Score=20.12 Aligned_cols=58 Identities=17% Similarity=0.075 Sum_probs=29.3
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcC-CCceeEECCCCC-CchhHHhhCCCCccccEEE--eCCee
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKG-IPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLV--HNGKP 65 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~g-i~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~--~~g~~ 65 (230)
+.+|+.++|+.|+...-.+ .+.+ -.+....++... ....+.....- ..+|++. .+|..
T Consensus 21 ~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~i-~~~Pt~~~~~~g~~ 87 (104)
T cd02997 21 LVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTKPEHDALKEEYNV-KGFPTFKYFENGKF 87 (104)
T ss_pred EEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCCCccHHHHHhCCC-ccccEEEEEeCCCe
Confidence 5567789999998663222 2221 123333344432 12333333232 4799887 45543
No 213
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=40.59 E-value=34 Score=23.05 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=13.1
Q ss_pred eEEEeccCChhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALR 26 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~ 26 (230)
+.+|+.++||||++..-.+.
T Consensus 9 v~~F~~~~C~~C~~~~~~~~ 28 (112)
T PF13098_consen 9 VVVFTDPWCPYCKKLEKELF 28 (112)
T ss_dssp EEEEE-TT-HHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH
Confidence 55667899999998755554
No 214
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=39.39 E-value=1.9e+02 Score=22.83 Aligned_cols=72 Identities=14% Similarity=0.101 Sum_probs=40.7
Q ss_pred eEEEeccCChhHHHHHHHHHH-----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeee------ehhHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRV-----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPI------TESYIIL 73 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~-----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i------~eS~~I~ 73 (230)
+..|+.++|+.|+...-.+.. .| .+....+|.... .++.+..-- ..+|++. ++|..+ .....|.
T Consensus 56 lV~FyApWC~~Ck~~~P~~e~la~~~~~-~v~~~~VD~~~~-~~l~~~~~I-~~~PTl~~f~~G~~v~~~~G~~s~e~L~ 132 (224)
T PTZ00443 56 FVKFYAPWCSHCRKMAPAWERLAKALKG-QVNVADLDATRA-LNLAKRFAI-KGYPTLLLFDKGKMYQYEGGDRSTEKLA 132 (224)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEecCccc-HHHHHHcCC-CcCCEEEEEECCEEEEeeCCCCCHHHHH
Confidence 556788999999865443322 33 234444555432 344433222 5799887 677544 2345566
Q ss_pred HHHHHhcC
Q 026934 74 EYIDETWQ 81 (230)
Q Consensus 74 ~yL~~~~~ 81 (230)
+|+.+.+.
T Consensus 133 ~fi~~~~~ 140 (224)
T PTZ00443 133 AFALGDFK 140 (224)
T ss_pred HHHHHHHH
Confidence 77766654
No 215
>PHA03075 glutaredoxin-like protein; Provisional
Probab=39.35 E-value=48 Score=23.25 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=46.9
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhc
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETW 80 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~ 80 (230)
.+.|+|-|.|+-|+.+.-+|....=.|+...|+.-. |..++ |++=+|..|+.. .=-..+.+||...+
T Consensus 4 tLILfGKP~C~vCe~~s~~l~~ledeY~ilrVNIlS----fFsK~---g~v~~lg~d~~y-~lInn~~~~lgne~ 70 (123)
T PHA03075 4 TLILFGKPLCSVCESISEALKELEDEYDILRVNILS----FFSKD---GQVKVLGMDKGY-TLINNFFKHLGNEY 70 (123)
T ss_pred eEEEeCCcccHHHHHHHHHHHHhhccccEEEEEeee----eeccC---CceEEEecccce-ehHHHHHHhhcccE
Confidence 478999999999999999999999999999988521 11111 678778754322 11235677776544
No 216
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=39.26 E-value=87 Score=20.94 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=31.2
Q ss_pred eEEEeccCChhHHHHHHHHHH-----cC-C----CceeEECCCCCCchhHHhhCCCCccccEEE--eCCe
Q 026934 7 VKLHGMWASTYSKRVELALRV-----KG-I----PYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~-----~g-i----~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~ 64 (230)
+..|+.++|+.|+...-.+.. .+ . .+....++.... .++....-- ..+|++. .+|.
T Consensus 22 lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~-~~l~~~~~v-~~~Ptl~~~~~g~ 89 (108)
T cd02996 22 LVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKE-SDIADRYRI-NKYPTLKLFRNGM 89 (108)
T ss_pred EEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCC-HHHHHhCCC-CcCCEEEEEeCCc
Confidence 456678999999976554432 11 1 234445555443 333333222 4799987 4665
No 217
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=37.84 E-value=1.6e+02 Score=22.06 Aligned_cols=58 Identities=9% Similarity=-0.046 Sum_probs=32.8
Q ss_pred EEEeccCChhHHHHHHHH---HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeeeeh
Q 026934 8 KLHGMWASTYSKRVELAL---RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPITE 68 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L---~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~e 68 (230)
..++.++|+-|+.+--.| +..--.+....++.... .+....+- ..+|+|. .+|..+..
T Consensus 88 V~Fya~wc~~Ck~m~~~l~~LA~~~~~vkF~kVd~d~~--~l~~~f~v-~~vPTlllyk~G~~v~~ 150 (175)
T cd02987 88 VHIYEPGIPGCAALNSSLLCLAAEYPAVKFCKIRASAT--GASDEFDT-DALPALLVYKGGELIGN 150 (175)
T ss_pred EEEECCCCchHHHHHHHHHHHHHHCCCeEEEEEeccch--hhHHhCCC-CCCCEEEEEECCEEEEE
Confidence 334668999888543322 22212345555665432 44444454 5899987 57876653
No 218
>PF01323 DSBA: DSBA-like thioredoxin domain; InterPro: IPR001853 DSBA is a sub-family of the Thioredoxin family []. The efficient and correct folding of bacterial disulphide bonded proteins in vivo is dependent upon a class of periplasmic oxidoreductase proteins called DsbA, after the Escherichia coli enzyme. The bacterial protein-folding factor DsbA is the most oxidizing of the thioredoxin family. DsbA catalyses disulphide-bond formation during the folding of secreted proteins. The extremely oxidizing nature of DsbA has been proposed to result from either domain motion or stabilising active-site interactions in the reduced form. DsbA's highly oxidizing nature is a result of hydrogen bond, electrostatic and helix-dipole interactions that favour the thiolate over the disulphide at the active site []. In the pathogenic bacterium Vibrio cholerae, the DsbA homologue (TcpG) is responsible for the folding, maturation and secretion of virulence factors. While the overall architecture of TcpG and DsbA is similar and the surface features are retained in TcpG, there are significant differences. For example, the kinked active site helix results from a three-residue loop in DsbA, but is caused by a proline in TcpG (making TcpG more similar to thioredoxin in this respect). Furthermore, the proposed peptide binding groove of TcpG is substantially shortened compared with that of DsbA due to a six-residue deletion. Also, the hydrophobic pocket of TcpG is more shallow and the acidic patch is much less extensive than that of E. coli DsbA [].; GO: 0015035 protein disulfide oxidoreductase activity; PDB: 3GL5_A 3DKS_D 3RPP_C 3RPN_B 1YZX_A 3L9V_C 2IMD_A 2IME_A 2IMF_A 2B3S_B ....
Probab=37.13 E-value=56 Score=24.39 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=25.0
Q ss_pred ceEEEeccCChhHHH----HHHHHHHc-CCCceeEECCCC
Q 026934 6 EVKLHGMWASTYSKR----VELALRVK-GIPYEYIEEDLR 40 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~----v~~~L~~~-gi~~~~~~v~~~ 40 (230)
++++|....||||.. ++-+++.. ++.++...+.+.
T Consensus 1 ~i~~~~D~~Cp~cy~~~~~l~~l~~~~~~~~i~~~p~~l~ 40 (193)
T PF01323_consen 1 TIEFFFDFICPWCYLASPRLRKLRAEYPDVEIEWRPFPLR 40 (193)
T ss_dssp EEEEEEBTTBHHHHHHHHHHHHHHHHHTTCEEEEEEESSS
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHhcCCcEEEeccccc
Confidence 378899999999874 44455555 787777776653
No 219
>TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic. Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs).
Probab=36.80 E-value=1.9e+02 Score=24.95 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=43.1
Q ss_pred eEEEeccCChhHHHHHHHH-----HH--cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCee-------eehhH
Q 026934 7 VKLHGMWASTYSKRVELAL-----RV--KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKP-------ITESY 70 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~--~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~-------i~eS~ 70 (230)
+.+|+.+||+.|+...-.+ .+ .+-.+....++.... .++...-.- ..+|++. .+|.. -.+..
T Consensus 22 ~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~~~~~i-~~~Pt~~~~~~g~~~~~~~~g~~~~~ 99 (462)
T TIGR01130 22 LVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDATEE-KDLAQKYGV-SGYPTLKIFRNGEDSVSDYNGPRDAD 99 (462)
T ss_pred EEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECCCc-HHHHHhCCC-ccccEEEEEeCCccceeEecCCCCHH
Confidence 5667889999998764222 22 232355556665443 334333222 4689886 45543 13567
Q ss_pred HHHHHHHHhcC
Q 026934 71 IILEYIDETWQ 81 (230)
Q Consensus 71 ~I~~yL~~~~~ 81 (230)
.|.+|+.+..+
T Consensus 100 ~l~~~i~~~~~ 110 (462)
T TIGR01130 100 GIVKYMKKQSG 110 (462)
T ss_pred HHHHHHHHhcC
Confidence 78899987764
No 220
>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.
Probab=35.09 E-value=1.3e+02 Score=19.73 Aligned_cols=55 Identities=11% Similarity=-0.088 Sum_probs=30.5
Q ss_pred eEEEeccCChhHHHHHHHHHH----cCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCC
Q 026934 7 VKLHGMWASTYSKRVELALRV----KGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNG 63 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~----~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g 63 (230)
+..|+.++|+.|++..=.+.. .+-.+....++.... .++.+..-- ..+|++. .+|
T Consensus 23 ~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~i-~~~Pt~~~~~~g 83 (104)
T cd03004 23 LVDFYAPWCGPCQALLPELRKAARALKGKVKVGSVDCQKY-ESLCQQANI-RAYPTIRLYPGN 83 (104)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECCch-HHHHHHcCC-CcccEEEEEcCC
Confidence 556688999999865433322 221244455665443 344333333 5799887 454
No 221
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=34.78 E-value=1.6e+02 Score=20.63 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=28.6
Q ss_pred cCChhHHHHHHHH----HHcCCCceeEECCCCCC------chhHHhhCCCCc-cccEEE--eCCeeeeh
Q 026934 13 WASTYSKRVELAL----RVKGIPYEYIEEDLRNK------SPLLLQYNSVYK-KVPVLV--HNGKPITE 68 (230)
Q Consensus 13 ~~sp~~~~v~~~L----~~~gi~~~~~~v~~~~~------~~~~~~~~p~~~-~vP~L~--~~g~~i~e 68 (230)
+|||.|+.+.-.+ ....-.+....++.+.. ..++.. .+... .+|++. .+|..+.|
T Consensus 38 ~WC~pCr~~~P~l~~l~~~~~~~v~fv~Vdvd~~~~w~d~~~~~~~-~~~I~~~iPT~~~~~~~~~l~~ 105 (119)
T cd02952 38 SWCPDCVKAEPVVREALKAAPEDCVFIYCDVGDRPYWRDPNNPFRT-DPKLTTGVPTLLRWKTPQRLVE 105 (119)
T ss_pred CCCHhHHhhchhHHHHHHHCCCCCEEEEEEcCCcccccCcchhhHh-ccCcccCCCEEEEEcCCceecc
Confidence 7999998654433 33332345555655332 234443 22213 699987 34544444
No 222
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=34.17 E-value=1.4e+02 Score=19.81 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=29.1
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCC
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNG 63 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g 63 (230)
+..|+.++|+.|+...=.+ .+.++ ....++.......+.+.--- ..+|++. ++|
T Consensus 22 lV~F~a~WC~~C~~~~p~l~~la~~~~~~--~~~~vd~~~~~~~l~~~~~V-~~~PT~~lf~~g 82 (100)
T cd02999 22 AVLFYASWCPFSASFRPHFNALSSMFPQI--RHLAIEESSIKPSLLSRYGV-VGFPTILLFNST 82 (100)
T ss_pred EEEEECCCCHHHHhHhHHHHHHHHHhccC--ceEEEECCCCCHHHHHhcCC-eecCEEEEEcCC
Confidence 4556778999998766444 33443 33344443122333333222 4799887 445
No 223
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=33.93 E-value=54 Score=24.15 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=24.8
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCCchhHH
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLL 47 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~ 47 (230)
..-+++++++-.|++.|++|+.........++++.
T Consensus 11 SD~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~ 45 (150)
T PF00731_consen 11 SDLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLL 45 (150)
T ss_dssp GGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHH
Confidence 35588999999999999999988777654444443
No 224
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=33.67 E-value=1.7e+02 Score=20.44 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=32.9
Q ss_pred EEeccCChhHHHHHHHHHHcCCC----ceeEECCCCCCchhHHhhCCCCccccEEE--eCCeeee
Q 026934 9 LHGMWASTYSKRVELALRVKGIP----YEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPIT 67 (230)
Q Consensus 9 L~~~~~sp~~~~v~~~L~~~gi~----~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~ 67 (230)
-++.+|||-|+.+.=.+...--. .....+|.+.. +++....-- ..+|++. .+|..+.
T Consensus 20 ~F~A~WCgpCk~m~P~le~la~~~~~~v~f~kVDvD~~-~~la~~~~V-~~iPTf~~fk~G~~v~ 82 (114)
T cd02954 20 RFGRDWDPVCMQMDEVLAKIAEDVSNFAVIYLVDIDEV-PDFNKMYEL-YDPPTVMFFFRNKHMK 82 (114)
T ss_pred EEECCCChhHHHHHHHHHHHHHHccCceEEEEEECCCC-HHHHHHcCC-CCCCEEEEEECCEEEE
Confidence 36778999998765555332211 34455665543 444443322 4699987 5776653
No 225
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif. CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.
Probab=33.18 E-value=1.5e+02 Score=19.73 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=31.1
Q ss_pred eEEEeccCChhHHHHHHHHHHcC---CCceeEECCCCCCc--hhHHhhCCCCccccEEE--eCCeee
Q 026934 7 VKLHGMWASTYSKRVELALRVKG---IPYEYIEEDLRNKS--PLLLQYNSVYKKVPVLV--HNGKPI 66 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~g---i~~~~~~v~~~~~~--~~~~~~~p~~~~vP~L~--~~g~~i 66 (230)
+..|+.+||+.|+...=.+.... -.+....++.+... .++.+..-- ..+|++. .+|..+
T Consensus 19 vv~F~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~d~~~~~~~l~~~~~V-~~~Pt~~~~~~G~~v 84 (103)
T cd02985 19 VLEFALKHSGPSVKIYPTMVKLSRTCNDVVFLLVNGDENDSTMELCRREKI-IEVPHFLFYKDGEKI 84 (103)
T ss_pred EEEEECCCCHhHHHHhHHHHHHHHHCCCCEEEEEECCCChHHHHHHHHcCC-CcCCEEEEEeCCeEE
Confidence 44456789999886544443211 12344455543322 244443333 4699877 467654
No 226
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=33.10 E-value=52 Score=20.06 Aligned_cols=30 Identities=23% Similarity=0.130 Sum_probs=19.3
Q ss_pred EEEeccCChhHHHHHHHHHHcCCCceeEEC
Q 026934 8 KLHGMWASTYSKRVELALRVKGIPYEYIEE 37 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v 37 (230)
+||.+....-++.++-+|+..||++....-
T Consensus 2 ~l~~~~~~~ea~~i~~~L~~~gI~~~v~~~ 31 (67)
T PF09413_consen 2 KLYTAGDPIEAELIKGLLEENGIPAFVKNE 31 (67)
T ss_dssp EEEEE--HHHHHHHHHHHHHTT--EE--S-
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEECC
Confidence 677777666699999999999999887643
No 227
>PLN02309 5'-adenylylsulfate reductase
Probab=33.03 E-value=2.9e+02 Score=24.57 Aligned_cols=52 Identities=6% Similarity=0.060 Sum_probs=30.4
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHHh--hCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLLQ--YNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~~--~~p~~~~vP~L~ 60 (230)
+..|+.++|++|+.+.-.+ .+.+-.+....++.......+.. .+- ..+|++.
T Consensus 369 lV~FyApWC~~Cq~m~p~~e~LA~~~~~~~V~f~kVD~d~~~~~la~~~~~I--~~~PTil 427 (457)
T PLN02309 369 LVVLYAPWCPFCQAMEASYEELAEKLAGSGVKVAKFRADGDQKEFAKQELQL--GSFPTIL 427 (457)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhccCCeEEEEEECCCcchHHHHhhCCC--ceeeEEE
Confidence 5677889999998655333 23343455555665422233332 333 5799987
No 228
>COG5494 Predicted thioredoxin/glutaredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=32.85 E-value=1.5e+02 Score=23.38 Aligned_cols=71 Identities=20% Similarity=0.113 Sum_probs=46.0
Q ss_pred ceEEEeccCChhHHHHHHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEEeCCeeee----hhHHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLVHNGKPIT----ESYIILEYIDE 78 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~~~g~~i~----eS~~I~~yL~~ 78 (230)
.+++|.+..|--|-...-.|+.+|+-=....++.....-.+.+ |-- -.+|.+..||..+. |...|-.-|.-
T Consensus 12 ~VkI~~HktC~ssy~Lf~~L~nkgll~~Vkii~a~~p~f~~~~-~~V-~SvP~Vf~DGel~~~dpVdp~~ies~~~G 86 (265)
T COG5494 12 EVKIFTHKTCVSSYMLFEYLENKGLLGKVKIIDAELPPFLAFE-KGV-ISVPSVFIDGELVYADPVDPEEIESILSG 86 (265)
T ss_pred EEEEEEecchHHHHHHHHHHHhcCCCCCceEEEcCCChHHHhh-cce-eecceEEEcCeEEEcCCCCHHHHHHHHcC
Confidence 4789999999989889999999998644444444433333232 233 47999997776543 44445555433
No 229
>cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44.
Probab=32.53 E-value=1.1e+02 Score=21.13 Aligned_cols=55 Identities=7% Similarity=-0.110 Sum_probs=31.4
Q ss_pred eEEEeccCChhHHHHHHHHHHcCC----CceeEECCCCCCchhHH--hhCCCCccccEEE--eCCe
Q 026934 7 VKLHGMWASTYSKRVELALRVKGI----PYEYIEEDLRNKSPLLL--QYNSVYKKVPVLV--HNGK 64 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi----~~~~~~v~~~~~~~~~~--~~~p~~~~vP~L~--~~g~ 64 (230)
+..|+.+||+.|+...-.+....- ......+|.+.. ..+. +.+- ..+|+|. .+|.
T Consensus 33 lV~FyA~WC~~Ck~l~p~~~~la~~~~~~v~~~~Vd~d~~-~~l~~~~~~I--~~~PTl~lf~~g~ 95 (113)
T cd03006 33 LVMYYAPWDAQSQAARQEFEQVAQKLSDQVLFVAINCWWP-QGKCRKQKHF--FYFPVIHLYYRSR 95 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCC-hHHHHHhcCC--cccCEEEEEECCc
Confidence 455678999999977655544322 234455665432 3333 2333 4699887 4553
No 230
>PF13728 TraF: F plasmid transfer operon protein
Probab=31.79 E-value=1.5e+02 Score=23.24 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=33.8
Q ss_pred eEEEeccCChhHHH----HHHHHHHcCCCceeEECCCC---------CCchhHHhhCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKR----VELALRVKGIPYEYIEEDLR---------NKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~----v~~~L~~~gi~~~~~~v~~~---------~~~~~~~~~~p~~~~vP~L~ 60 (230)
+.+++.+.||||+. ++.+....|+++-.+.+|-. .........+. ..+|+|.
T Consensus 124 L~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~g~~~~l~v--~~~Pal~ 188 (215)
T PF13728_consen 124 LFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDPGQAKRLGV--KVTPALF 188 (215)
T ss_pred EEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCHHHHHHcCC--CcCCEEE
Confidence 56677789999984 66677778988777766521 11222334455 3789887
No 231
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.52 E-value=53 Score=21.14 Aligned_cols=23 Identities=22% Similarity=0.427 Sum_probs=20.2
Q ss_pred CChhHHHHHHHHHHcCCCceeEE
Q 026934 14 ASTYSKRVELALRVKGIPYEYIE 36 (230)
Q Consensus 14 ~sp~~~~v~~~L~~~gi~~~~~~ 36 (230)
--+|++|+.-.|+..|++|+..+
T Consensus 14 evGF~rk~L~I~E~~~is~Eh~P 36 (76)
T cd04911 14 EVGFGRKLLSILEDNGISYEHMP 36 (76)
T ss_pred hhcHHHHHHHHHHHcCCCEeeec
Confidence 34789999999999999999874
No 232
>cd03020 DsbA_DsbC_DsbG DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Probab=30.31 E-value=65 Score=24.51 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=17.8
Q ss_pred ceEEEeccCChhHHHHHHHHHH
Q 026934 6 EVKLHGMWASTYSKRVELALRV 27 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~ 27 (230)
.+.+|..+.||||++..-.+..
T Consensus 80 ~i~~f~D~~Cp~C~~~~~~l~~ 101 (197)
T cd03020 80 VVYVFTDPDCPYCRKLEKELKP 101 (197)
T ss_pred EEEEEECCCCccHHHHHHHHhh
Confidence 4667788999999998877764
No 233
>cd03021 DsbA_GSTK DsbA family, Glutathione (GSH) S-transferase Kappa (GSTK) subfamily; GSTK is a member of the GST family of enzymes which catalyzes the transfer of the thiol of GSH to electrophilic substrates. It is specifically located in the mitochondria and peroxisomes, unlike other members of the canonical GST family, which are mainly cytosolic. The biological substrates of GSTK are not yet known. It is presumed to have a protective role during respiration when large amounts of reactive oxygen species are generated. GSTK has the same general fold as DsbA, consisting of a thioredoxin domain interrupted by an alpha-helical domain and its biological unit is a homodimer. GSTK is closely related to the bacterial enzyme, 2-hydroxychromene-2-carboxylate (HCCA) isomerase. It shows little sequence similarity to the other members of the GST family.
Probab=28.70 E-value=88 Score=24.07 Aligned_cols=34 Identities=15% Similarity=0.003 Sum_probs=22.6
Q ss_pred CceEEEeccCChhHHH----HHHHHHHcCCCceeEECC
Q 026934 5 NEVKLHGMWASTYSKR----VELALRVKGIPYEYIEED 38 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~----v~~~L~~~gi~~~~~~v~ 38 (230)
+++.+|+...||||.- ++-++...+++++.+.+.
T Consensus 1 ~~Id~~~D~vcPwcylg~~~l~~~~~~~~v~i~~~P~~ 38 (209)
T cd03021 1 PKIELYYDVVSPYSYLAFEVLCRYQTAWNVDITYVPVF 38 (209)
T ss_pred CceEEEEeCCChHHHHHHHHHHHHHHHhCCeEEEEeee
Confidence 3588999999999874 344445566655555543
No 234
>cd02978 KaiB_like KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA. KaiB is an essential protein in maintaining circadian rhythm. It was originally discovered from the cyanobacterium Synechococcus as part of the circadian clock gene cluster, kaiABC. KaiB attenuates KaiA-enhanced KaiC autokinase activity by interacting with KaiA-KaiC complexes in a circadian fashion. KaiB is membrane-associated as well as cytosolic. The amount of membrane-associated protein peaks in the evening (at circadian time (CT) 12-16) while the cytosolic form peaks later (at CT 20). The rhythmic localization of KaiB may function in regulating the formation of Kai complexes. SasA is a sensory histidine kinase which associates with KaiC. Although it is not an essential oscillator component, it is important in enhancing kaiABC expression and is important in metabolic growth control under day/night cycle conditions. SasA contains an N-terminal sensor
Probab=28.36 E-value=1.4e+02 Score=19.04 Aligned_cols=53 Identities=25% Similarity=0.303 Sum_probs=34.6
Q ss_pred ceEEEeccCChhHHHH-----HHHHHHcCCCceeEECCCCCCchhHHhhCCCCccccEEE
Q 026934 6 EVKLHGMWASTYSKRV-----ELALRVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v-----~~~L~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~ 60 (230)
+.+||-...+|-|++. +++=++.+-+|+...+|... .+++.+..-- --.|+|+
T Consensus 3 ~L~Lyv~g~tp~S~~ai~nl~~i~e~~l~~~~~LeVIDv~~-~P~lAe~~~i-vAtPtLv 60 (72)
T cd02978 3 VLRLYVAGRTPKSERALQNLKRILEELLGGPYELEVIDVLK-QPQLAEEDKI-VATPTLV 60 (72)
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHHhcCCcEEEEEEEccc-CHhHHhhCCE-EEechhh
Confidence 3678887777777643 23334457789999998765 3555555444 4677776
No 235
>cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus. The TMX3 transcript is found in a variety of tissues with the highest levels detected in skeletal muscle and the heart. In vitro, TMX3 showed oxidase activity albeit slightly lower than that of protein disulfide isomerase.
Probab=27.95 E-value=1.8e+02 Score=19.15 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=27.6
Q ss_pred eEEEeccCChhHHHHHHHH-----HHc--CCCceeEECCCCCCchhHH-hhCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVK--GIPYEYIEEDLRNKSPLLL-QYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~--gi~~~~~~v~~~~~~~~~~-~~~p~~~~vP~L~ 60 (230)
+..|+.++||.|++..-.+ .+. +..+....++.... +.+. ..+. ..+|++.
T Consensus 19 lv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~I--~~~Pt~~ 77 (104)
T cd03000 19 LVDFYAPWCGHCKKLEPVWNEVGAELKSSGSPVRVGKLDATAY-SSIASEFGV--RGYPTIK 77 (104)
T ss_pred EEEEECCCCHHHHhhChHHHHHHHHHHhcCCcEEEEEEECccC-HhHHhhcCC--ccccEEE
Confidence 4455778999998654333 221 33344444554332 2333 3344 4799987
No 236
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=27.77 E-value=1.1e+02 Score=22.79 Aligned_cols=33 Identities=24% Similarity=0.195 Sum_probs=25.9
Q ss_pred cCChhHHHHHHHHHHcCCCceeEECCCCCCchh
Q 026934 13 WASTYSKRVELALRVKGIPYEYIEEDLRNKSPL 45 (230)
Q Consensus 13 ~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~ 45 (230)
..-|.++++...|+..||+|+.........++.
T Consensus 9 SD~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~~ 41 (156)
T TIGR01162 9 SDLPTMKKAADILEEFGIPYELRVVSAHRTPEL 41 (156)
T ss_pred hhHHHHHHHHHHHHHcCCCeEEEEECcccCHHH
Confidence 455789999999999999999987776433333
No 237
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=27.03 E-value=93 Score=16.97 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=19.9
Q ss_pred ccccEEEeCCeeeehhHHHHHHHH
Q 026934 54 KKVPVLVHNGKPITESYIILEYID 77 (230)
Q Consensus 54 ~~vP~L~~~g~~i~eS~~I~~yL~ 77 (230)
|.+|....++..+.....|.+|++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 25 GELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred CCCCeEEeCCeEEEeHHHHHHHHh
Confidence 678887777888899999988885
No 238
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]
Probab=26.31 E-value=2.7e+02 Score=23.17 Aligned_cols=76 Identities=9% Similarity=0.133 Sum_probs=47.8
Q ss_pred CceEEEeccCChhHHHHHHHH----HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE--eCCeeee------hhHHH
Q 026934 5 NEVKLHGMWASTYSKRVELAL----RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPIT------ESYII 72 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~L----~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~------eS~~I 72 (230)
+.+.+|+.|+|+-|....=.| ++.+=.|.+..||.+..+.-=..... ..+|++. -+|..|- .-..|
T Consensus 45 PVlV~fWap~~~~c~qL~p~Lekla~~~~G~f~LakvN~D~~p~vAaqfgi--qsIPtV~af~dGqpVdgF~G~qPesql 122 (304)
T COG3118 45 PVLVDFWAPWCGPCKQLTPTLEKLAAEYKGKFKLAKVNCDAEPMVAAQFGV--QSIPTVYAFKDGQPVDGFQGAQPESQL 122 (304)
T ss_pred CeEEEecCCCCchHHHHHHHHHHHHHHhCCceEEEEecCCcchhHHHHhCc--CcCCeEEEeeCCcCccccCCCCcHHHH
Confidence 456777888998887544333 34455678888887654333334444 4799876 5664432 23468
Q ss_pred HHHHHHhcCC
Q 026934 73 LEYIDETWQN 82 (230)
Q Consensus 73 ~~yL~~~~~~ 82 (230)
-+||++..+.
T Consensus 123 r~~ld~~~~~ 132 (304)
T COG3118 123 RQFLDKVLPA 132 (304)
T ss_pred HHHHHHhcCh
Confidence 8888887653
No 239
>PRK09266 hypothetical protein; Provisional
Probab=25.79 E-value=1.4e+02 Score=24.02 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=39.3
Q ss_pred HHHHcCCCceeEECCCC---CCchhHHhhCCCCccccEEEeCCeeeehhHHHHHHHHHhcC
Q 026934 24 ALRVKGIPYEYIEEDLR---NKSPLLLQYNSVYKKVPVLVHNGKPITESYIILEYIDETWQ 81 (230)
Q Consensus 24 ~L~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~~vP~L~~~g~~i~eS~~I~~yL~~~~~ 81 (230)
.+...|++++...+++. ...+-|.--+.. |-+||-..|+..+.+...|.+.|.+.|.
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~-gi~pV~~i~~~~~~~~~~~~~~l~~~~~ 259 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWR-GQRAVSAIDDVALPDSHALLELLRRAYE 259 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCcc-ceEEEEEECCEECCCCchHHHHHHHHHH
Confidence 45567999988888763 333444444445 7999999888777655678888877664
No 240
>cd02955 SSP411 TRX domain, SSP411 protein family; members of this family are highly conserved proteins present in eukaryotes, bacteria and archaea, about 600-800 amino acids in length, which contain a TRX domain with a redox active CXXC motif. The human/rat protein, called SSP411, is specifically expressed in the testis in an age-dependent manner. The SSP411 mRNA is increased during spermiogenesis and is localized in round and elongated spermatids, suggesting a function in fertility regulation.
Probab=24.82 E-value=2.5e+02 Score=19.73 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=34.5
Q ss_pred EEEeccCChhHHHHHH-------HHHHcCCCceeEECCCCCCchhHHh--------hCCCCccccEEE---eCCeeeehh
Q 026934 8 KLHGMWASTYSKRVEL-------ALRVKGIPYEYIEEDLRNKSPLLLQ--------YNSVYKKVPVLV---HNGKPITES 69 (230)
Q Consensus 8 ~L~~~~~sp~~~~v~~-------~L~~~gi~~~~~~v~~~~~~~~~~~--------~~p~~~~vP~L~---~~g~~i~eS 69 (230)
..++..+|++|++..- +.....-.|..+.+|.+..+ +..+ ..-. +-+|+++ .+|+.+..+
T Consensus 20 l~f~a~WC~~Ck~me~~~f~~~~V~~~l~~~fv~VkvD~~~~~-~~~~~~~~~~~~~~~~-~G~Pt~vfl~~~G~~~~~~ 97 (124)
T cd02955 20 LSIGYSTCHWCHVMEHESFEDEEVAAILNENFVPIKVDREERP-DVDKIYMNAAQAMTGQ-GGWPLNVFLTPDLKPFFGG 97 (124)
T ss_pred EEEccCCCHhHHHHHHHccCCHHHHHHHhCCEEEEEEeCCcCc-HHHHHHHHHHHHhcCC-CCCCEEEEECCCCCEEeee
Confidence 3357789999987642 12222335777777765432 2211 1122 4689877 368888776
No 241
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=24.68 E-value=83 Score=24.90 Aligned_cols=21 Identities=5% Similarity=0.186 Sum_probs=16.7
Q ss_pred eEEEeccCChhHHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALRV 27 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~ 27 (230)
+.+|..+.||||++..--+..
T Consensus 111 I~vFtDp~CpyCkkl~~~l~~ 131 (232)
T PRK10877 111 ITVFTDITCGYCHKLHEQMKD 131 (232)
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 677788999999998766544
No 242
>cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO. They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.
Probab=24.63 E-value=1.9e+02 Score=20.02 Aligned_cols=60 Identities=15% Similarity=0.047 Sum_probs=34.8
Q ss_pred eEEEeccC--ChhHHHHHHHHHHcCCCc----eeEECCCCCCchhHHhhCCCCccccEEE--eCCeeeeh
Q 026934 7 VKLHGMWA--STYSKRVELALRVKGIPY----EYIEEDLRNKSPLLLQYNSVYKKVPVLV--HNGKPITE 68 (230)
Q Consensus 7 ~~L~~~~~--sp~~~~v~~~L~~~gi~~----~~~~v~~~~~~~~~~~~~p~~~~vP~L~--~~g~~i~e 68 (230)
+..|+..+ ||-|..+.-.|...--.| ....++....+ ++....-- ..+|+|. .+|..+..
T Consensus 31 v~~f~~~~~~cp~c~~i~P~leela~e~~~~v~f~kVdid~~~-~la~~f~V-~sIPTli~fkdGk~v~~ 98 (111)
T cd02965 31 VLLLAGDPVRFPEVLDVAVVLPELLKAFPGRFRAAVVGRADEQ-ALAARFGV-LRTPALLFFRDGRYVGV 98 (111)
T ss_pred EEEecCCcccCcchhhhHhHHHHHHHHCCCcEEEEEEECCCCH-HHHHHcCC-CcCCEEEEEECCEEEEE
Confidence 44555554 999987776664433333 33355555433 54443322 4799998 58876543
No 243
>KOG0912 consensus Thiol-disulfide isomerase and thioredoxin [Posttranslational modification, protein turnover, chaperones; Energy production and conversion]
Probab=24.63 E-value=84 Score=26.23 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=40.9
Q ss_pred EeccCChhHHHHHHHHHHcCCCcee-------EECCCC-CCchhHHhhCCCCccccEEE--eCCeeee-------hhHHH
Q 026934 10 HGMWASTYSKRVELALRVKGIPYEY-------IEEDLR-NKSPLLLQYNSVYKKVPVLV--HNGKPIT-------ESYII 72 (230)
Q Consensus 10 ~~~~~sp~~~~v~~~L~~~gi~~~~-------~~v~~~-~~~~~~~~~~p~~~~vP~L~--~~g~~i~-------eS~~I 72 (230)
|+-.||+||++..-..+++--.|.. ++-..+ ++...+....-- .|.|+|. .+|..+. ..-|.
T Consensus 20 FyAdWCrFSq~L~piF~EAa~~~~~e~P~~kvvwg~VDcd~e~~ia~ky~I-~KyPTlKvfrnG~~~~rEYRg~RsVeaL 98 (375)
T KOG0912|consen 20 FYADWCRFSQMLKPIFEEAAAKFKQEFPEGKVVWGKVDCDKEDDIADKYHI-NKYPTLKVFRNGEMMKREYRGQRSVEAL 98 (375)
T ss_pred eehhhchHHHHHhHHHHHHHHHHHHhCCCcceEEEEcccchhhHHhhhhcc-ccCceeeeeeccchhhhhhccchhHHHH
Confidence 3567999999988888776554432 221211 222333344444 5888886 5775544 23467
Q ss_pred HHHHHHhc
Q 026934 73 LEYIDETW 80 (230)
Q Consensus 73 ~~yL~~~~ 80 (230)
.+|+.++.
T Consensus 99 ~efi~kq~ 106 (375)
T KOG0912|consen 99 IEFIEKQL 106 (375)
T ss_pred HHHHHHHh
Confidence 77776654
No 244
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=24.42 E-value=1.7e+02 Score=18.25 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=26.8
Q ss_pred eEEEeccCChhHHHHHHHHHHcCCCceeEECC
Q 026934 7 VKLHGMWASTYSKRVELALRVKGIPYEYIEED 38 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~gi~~~~~~v~ 38 (230)
.-+..|+...++.++.-.|...|++++.+++.
T Consensus 3 ~~~i~F~st~~a~~~ek~lk~~gi~~~liP~P 34 (73)
T PF11823_consen 3 YYLITFPSTHDAMKAEKLLKKNGIPVRLIPTP 34 (73)
T ss_pred eEEEEECCHHHHHHHHHHHHHCCCcEEEeCCC
Confidence 34667887888999999999999999988664
No 245
>PF13281 DUF4071: Domain of unknown function (DUF4071)
Probab=24.17 E-value=4.7e+02 Score=22.57 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=40.4
Q ss_pred ccccEEE-eCCeeeehhHHHHHHHHHhcCCC-C-CCCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC----chhHHHH
Q 026934 54 KKVPVLV-HNGKPITESYIILEYIDETWQNG-P-RLLPQDPYQRAQIRFWASFIQQQLFGSFYKLISSN----GEEQEKA 126 (230)
Q Consensus 54 ~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~-~-~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 126 (230)
.-+|+.+ ++|.++..-...+.-+.+..... . ...|..+.....+.+++.-+...........+.++ .+.....
T Consensus 39 ~fipY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rl~~lL~~~~~~s~~~~~e~fl~dirkare~~~g~ 118 (374)
T PF13281_consen 39 TFIPYIVTPQGKVFCCESSPMKGLTELMQPSFELALAPQCTPLVSRLKQLLKDVEIQSSAHKREKFLNDIRKARERYSGA 118 (374)
T ss_pred CccCeeecCCCceeeecchhhhhhhhhcCcchhhcccccccchHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHhhH
Confidence 4588888 55655444433444444333221 1 01232333344444444433322222222222221 1122223
Q ss_pred HHHHHHHHHHHHHHHh
Q 026934 127 VEEVFEKMNVLEKGMK 142 (230)
Q Consensus 127 ~~~~~~~l~~le~~L~ 142 (230)
++.+.+.|..+...|.
T Consensus 119 ~~~l~~~L~~i~~rLd 134 (374)
T PF13281_consen 119 RKELAKELRRIRQRLD 134 (374)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 4677788888888886
No 246
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=24.00 E-value=62 Score=24.78 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=18.9
Q ss_pred eCCeeeehhHHHHHHHHHhcC
Q 026934 61 HNGKPITESYIILEYIDETWQ 81 (230)
Q Consensus 61 ~~g~~i~eS~~I~~yL~~~~~ 81 (230)
..+.+|.||..|-+|+.++|+
T Consensus 153 ~ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 153 YADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred hCCEEEEcCHHHHHHHHHHcC
Confidence 356889999999999999998
No 247
>TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent. This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis.
Probab=23.69 E-value=5.2e+02 Score=23.02 Aligned_cols=55 Identities=5% Similarity=0.048 Sum_probs=29.4
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHH--hhCCCCccccEEE--eCC
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLL--QYNSVYKKVPVLV--HNG 63 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~--~~~p~~~~vP~L~--~~g 63 (230)
+..|+.++|+.|+.+.=.+ ++.+-.+....++.+.....+. +.+- ..+|++. .+|
T Consensus 375 LV~FyApWC~~Ck~m~P~~eelA~~~~~~~v~~~kVdvD~~~~~~~~~~~~I--~~~PTii~Fk~g 438 (463)
T TIGR00424 375 LVVLYAPWCPFCQAMEASYLELAEKLAGSGVKVAKFRADGDQKEFAKQELQL--GSFPTILFFPKH 438 (463)
T ss_pred EEEEECCCChHHHHHHHHHHHHHHHhccCCcEEEEEECCCCccHHHHHHcCC--CccceEEEEECC
Confidence 4556889999998665333 2333233444455433222232 2232 4689887 455
No 248
>COG5515 Uncharacterized conserved small protein [Function unknown]
Probab=22.85 E-value=84 Score=19.22 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=16.5
Q ss_pred ceEEEec----cCChhHHHHHHHHHH
Q 026934 6 EVKLHGM----WASTYSKRVELALRV 27 (230)
Q Consensus 6 ~~~L~~~----~~sp~~~~v~~~L~~ 27 (230)
+|+||.+ ..|.||++|-.+|..
T Consensus 2 ~mKLYRfiTGpDDssFChrvta~LN~ 27 (70)
T COG5515 2 KMKLYRFITGPDDSSFCHRVTAALNK 27 (70)
T ss_pred cceeeEeecCCchHHHHHHHHHHHhC
Confidence 3788865 467789999888854
No 249
>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.
Probab=22.56 E-value=2.3e+02 Score=18.33 Aligned_cols=51 Identities=16% Similarity=0.053 Sum_probs=28.5
Q ss_pred eEEEeccCChhHHHHHHHH-----HHcCCCceeEECCCCCCchhHHhhCCCCccccEEE
Q 026934 7 VKLHGMWASTYSKRVELAL-----RVKGIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L-----~~~gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~ 60 (230)
+.+++.++|+.|+...-.+ .+.+ .+....++......-..+.+. ..+|++.
T Consensus 22 lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~id~~~~~~~~~~~~i--~~~P~~~ 77 (103)
T cd03001 22 LVEFYAPWCGHCKNLAPEWKKAAKALKG-IVKVGAVDADVHQSLAQQYGV--RGFPTIK 77 (103)
T ss_pred EEEEECCCCHHHHHHhHHHHHHHHHhcC-CceEEEEECcchHHHHHHCCC--CccCEEE
Confidence 5566788999998654322 2222 244445555443333344455 3699876
No 250
>PF14595 Thioredoxin_9: Thioredoxin; PDB: 1Z6N_A.
Probab=22.55 E-value=41 Score=23.96 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=25.5
Q ss_pred ceEEEeccCChhHHH----HHHHHHHc-CCCceeEECCC-CCCchhHHhhCCCCccccEEE
Q 026934 6 EVKLHGMWASTYSKR----VELALRVK-GIPYEYIEEDL-RNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~----v~~~L~~~-gi~~~~~~v~~-~~~~~~~~~~~p~~~~vP~L~ 60 (230)
.+.++.-+|||.|.+ +.-+++.. +|+++....+- ......|+. +-. ..+|+++
T Consensus 44 ~ilvi~e~WCgD~~~~vP~l~kiae~~p~i~~~~i~rd~~~el~~~~lt-~g~-~~IP~~I 102 (129)
T PF14595_consen 44 NILVITETWCGDCARNVPVLAKIAEANPNIEVRIILRDENKELMDQYLT-NGG-RSIPTFI 102 (129)
T ss_dssp EEEEE--TT-HHHHHHHHHHHHHHHH-TTEEEEEE-HHHHHHHTTTTTT--SS---SSEEE
T ss_pred EEEEEECCCchhHHHHHHHHHHHHHhCCCCeEEEEEecCChhHHHHHHh-CCC-eecCEEE
Confidence 466778899999884 33444455 66666554331 111233444 333 5899998
No 251
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=22.34 E-value=1.1e+02 Score=19.24 Aligned_cols=22 Identities=14% Similarity=-0.150 Sum_probs=16.6
Q ss_pred eEEEeccCChhHHHHHHHHHHc
Q 026934 7 VKLHGMWASTYSKRVELALRVK 28 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~~~ 28 (230)
+.+|..+.||+|....-.+...
T Consensus 1 i~~f~d~~Cp~C~~~~~~l~~~ 22 (98)
T cd02972 1 IVEFFDPLCPYCYLFEPELEKL 22 (98)
T ss_pred CeEEECCCCHhHHhhhHHHHHH
Confidence 3578889999999776666553
No 252
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=21.99 E-value=2.3e+02 Score=23.56 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=58.2
Q ss_pred hCCCCccccEEE-eCCeeeehhHHHHHHHHHhcCCCCCCCC--------CCHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Q 026934 49 YNSVYKKVPVLV-HNGKPITESYIILEYIDETWQNGPRLLP--------QDPYQRAQIRFWASFIQQQLFGSFYKLISSN 119 (230)
Q Consensus 49 ~~p~~~~vP~L~-~~g~~i~eS~~I~~yL~~~~~~~~~l~p--------~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 119 (230)
.+|. .+.|++. .||....++.-|-+-++.....++ +-| .|..+|.+...
T Consensus 92 y~~~-~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~-i~pai~vgid~~d~~~R~~~~~-------------------- 149 (299)
T COG2382 92 YNPL-EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGE-IPPAILVGIDYIDVKKRREELH-------------------- 149 (299)
T ss_pred CCcc-ccccEEEEeccHHHHhcCChHHHHHHHHHcCC-CCCceEEecCCCCHHHHHHHhc--------------------
Confidence 4676 6999999 899999999877777776554332 322 23333322211
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccCCCCchhhHHHHhhhhhh
Q 026934 120 GEEQEKAVEEVFEKMNVLEKGMKELLPEGVPEVDGNNSGVLDILVTATFGPY 171 (230)
Q Consensus 120 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~l~G~~~t~aDi~l~~~l~~~ 171 (230)
......+.-..++|..+++....+..+++..|.|.+++=. ++++..+.+.
T Consensus 150 -~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~-vsL~agl~~P 199 (299)
T COG2382 150 -CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGL-VSLYAGLRHP 199 (299)
T ss_pred -ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccH-HHHHHHhcCc
Confidence 1112333445677777888877655556778888766422 3333344443
No 253
>PF12728 HTH_17: Helix-turn-helix domain
Probab=21.87 E-value=1.5e+02 Score=16.74 Aligned_cols=26 Identities=12% Similarity=0.087 Sum_probs=21.8
Q ss_pred ccccEEEeCCeeeehhHHHHHHHHHh
Q 026934 54 KKVPVLVHNGKPITESYIILEYIDET 79 (230)
Q Consensus 54 ~~vP~L~~~g~~i~eS~~I~~yL~~~ 79 (230)
|.+|.+..++.....-..|.+|++++
T Consensus 25 g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 25 GKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred CCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 68888887788999999999998764
No 254
>KOG3131 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.71 E-value=54 Score=26.26 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=15.1
Q ss_pred CceEEEeccCChhHHHHHHH
Q 026934 5 NEVKLHGMWASTYSKRVELA 24 (230)
Q Consensus 5 ~~~~L~~~~~sp~~~~v~~~ 24 (230)
-++|||+.|+||++.---++
T Consensus 154 lkpTLyylPHcp~~LyeNiL 173 (281)
T KOG3131|consen 154 LKPTLYYLPHCPYALYENIL 173 (281)
T ss_pred cceeeEecCCCchHHHHHHH
Confidence 35899999999998643333
No 255
>PRK11657 dsbG disulfide isomerase/thiol-disulfide oxidase; Provisional
Probab=21.12 E-value=97 Score=24.88 Aligned_cols=20 Identities=20% Similarity=0.094 Sum_probs=16.0
Q ss_pred eEEEeccCChhHHHHHHHHH
Q 026934 7 VKLHGMWASTYSKRVELALR 26 (230)
Q Consensus 7 ~~L~~~~~sp~~~~v~~~L~ 26 (230)
+.+|..+.||||++..--+.
T Consensus 121 I~vFtDp~CpyC~kl~~~l~ 140 (251)
T PRK11657 121 VYVFADPNCPYCKQFWQQAR 140 (251)
T ss_pred EEEEECCCChhHHHHHHHHH
Confidence 66678899999999876654
No 256
>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies
Probab=21.02 E-value=2.3e+02 Score=17.80 Aligned_cols=53 Identities=9% Similarity=-0.140 Sum_probs=31.4
Q ss_pred ceEEEeccCChhHHHHHHHHHH----c--CCCceeEECCCCCCchhHHhhCCCCccccEEE
Q 026934 6 EVKLHGMWASTYSKRVELALRV----K--GIPYEYIEEDLRNKSPLLLQYNSVYKKVPVLV 60 (230)
Q Consensus 6 ~~~L~~~~~sp~~~~v~~~L~~----~--gi~~~~~~v~~~~~~~~~~~~~p~~~~vP~L~ 60 (230)
-+.+|+.++|++|+...-.+.. . +-.+....++... ...+.+.--- ..+|++.
T Consensus 18 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~i-~~~Pt~~ 76 (101)
T cd02961 18 VLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCTA-NNDLCSEYGV-RGYPTIK 76 (101)
T ss_pred EEEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeeccc-hHHHHHhCCC-CCCCEEE
Confidence 4667788899999976555533 2 3345555566544 2344333332 4799886
No 257
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=21.01 E-value=72 Score=22.36 Aligned_cols=62 Identities=13% Similarity=0.071 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCceeEECCCCC-CchhHHhhCCCCccccEEEeC---CeeeehhHHHHHHHHHhc
Q 026934 19 KRVELALRVKGIPYEYIEEDLRN-KSPLLLQYNSVYKKVPVLVHN---GKPITESYIILEYIDETW 80 (230)
Q Consensus 19 ~~v~~~L~~~gi~~~~~~v~~~~-~~~~~~~~~p~~~~vP~L~~~---g~~i~eS~~I~~yL~~~~ 80 (230)
..++=++...|++.+...++-.. -.++-....|+.|.+|++.|= =...-|...|+.|++++-
T Consensus 26 ~LakEl~e~~g~~I~~~r~~~~~~l~~e~~~~~~~sGy~PtViD~lrRC~T~EEALEVInylek~G 91 (128)
T PF09868_consen 26 ALAKELEEEEGISIEGYRLDEEQVLEEEEEEPDDFSGYNPTVIDYLRRCKTDEEALEVINYLEKRG 91 (128)
T ss_pred HHHHHHhccCCCceeeeechhhhhhhhccccCCCccCCCChHHHHHHHhCcHHHHHHHHHHHHHhC
Confidence 34555667788887765554211 011111233433778877641 245566667777777663
No 258
>PF07511 DUF1525: Protein of unknown function (DUF1525); InterPro: IPR011090 This family of proteins is restricted to the Gammaproteobacteria. Members belong to extended genomic regions that appear to be spread by conjugative transfer.
Probab=20.78 E-value=1.1e+02 Score=21.39 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=20.3
Q ss_pred ccccEEE-eCCeeeehhHHHHHHHHH
Q 026934 54 KKVPVLV-HNGKPITESYIILEYIDE 78 (230)
Q Consensus 54 ~~vP~L~-~~g~~i~eS~~I~~yL~~ 78 (230)
.|+|.++ |+..+|.+...|.+-+..
T Consensus 82 ~k~PAVVfD~~~VVYG~tDV~~A~~~ 107 (114)
T PF07511_consen 82 TKYPAVVFDDRYVVYGETDVARALAR 107 (114)
T ss_pred cccCEEEEcCCeEEecccHHHHHHHH
Confidence 5999999 667889999888877654
Done!