BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026943
(230 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/226 (66%), Positives = 162/226 (71%), Gaps = 36/226 (15%)
Query: 1 MMTWASYESLK-SLKTKTTDEDSASHGRSENQDEDHETKTG--RSHSSKRRRTAAVHNQS 57
MMTWAS+ES SLK KTTDEDSASHG SENQDED ETKT RSHSS+R R AAVHNQS
Sbjct: 196 MMTWASFESPPPSLKAKTTDEDSASHGGSENQDEDRETKTETVRSHSSRRTRAAAVHNQS 255
Query: 58 ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI+YLKQL+AQVQ M +VR NMPQ M
Sbjct: 256 ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQAM-SVR-NMPQ--M 311
Query: 118 MMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAA-----------TARTAPQS 166
MMPLGMQQQLQMSLLARMGMGV LG GMGMLDM+ MA +A A +AP
Sbjct: 312 MMPLGMQQQLQMSLLARMGMGVSLGMGMGMLDMSNMAHSAPQSLPPFIHPTQAAASAPTF 371
Query: 167 LPPPIYSPAA------------------SVTLPDPYYAFLAQSMNV 194
+PPP P+ SV LPDPY + LAQ V
Sbjct: 372 VPPPFVVPSMIPAHGSAPPASHDPATNNSVPLPDPYCSLLAQVCGV 417
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 143/260 (55%), Positives = 176/260 (67%), Gaps = 44/260 (16%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETK--TGRSHSSKRRRTAAVHNQSE 58
+MTWAS++S +SLKTK+ DEDSA H SENQ+E+ +TK RSHS++R R AA+HNQSE
Sbjct: 211 LMTWASFDSPRSLKTKSIDEDSACHVESENQEEEQDTKRVANRSHSARRSRAAAIHNQSE 270
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
RRRRDRIN+KMKALQKLVPNASKTDKASMLDEVI+YLKQL+AQVQ M +VR+ M+
Sbjct: 271 RRRRDRINEKMKALQKLVPNASKTDKASMLDEVIEYLKQLQAQVQFM-SVRS---MQQMI 326
Query: 119 MPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPPPIYSPAASV 178
MP+GMQQQLQMSLLARM G G+G+ M + AR+A Q+LPP I+ +
Sbjct: 327 MPIGMQQQLQMSLLARM------GMGVGLGMGMGMLDMSGMARSAQQTLPPLIHPTSVPT 380
Query: 179 TLP-----------------------------DPYYAFLAQSMNVELYNKMAALFRQQVK 209
T P DP+ AFLAQ+MN+++YNKMAA +RQQV
Sbjct: 381 TPPAFVPPHFLLPPSIPRQDPTQAKPATNGSVDPFCAFLAQTMNMDIYNKMAAFYRQQVN 440
Query: 210 QNTIQQAACSPSMQSNHMQG 229
Q T A SP+ QSN+MQG
Sbjct: 441 QTT--NAMSSPT-QSNNMQG 457
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 170/264 (64%), Gaps = 47/264 (17%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKT--GRSHSSKRRRTAAVHNQSE 58
MMTW S ES +SLK KTTDEDSA HG SENQDED ETKT GRSHS++R R AA+HNQSE
Sbjct: 173 MMTWPSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSE 232
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
RRRRDRINQKMK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQVQMM +VRN M M
Sbjct: 233 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM-SVRNMPQMMMPM 291
Query: 119 MPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP-----PIYS 173
MQQQLQMSLLARM G G+G+ M +A R APQ+LP P+ +
Sbjct: 292 G---MQQQLQMSLLARM------GMGVGLGMGMGMLDMSAVPRAAPQTLPSLLHANPVVA 342
Query: 174 PA---------------------------ASVTLPDPYYAFLAQSMNVELYNKMAALFRQ 206
A+V L DPY AFLAQSMN++LY+KMAAL+RQ
Sbjct: 343 ATPTFVPPPFVVPPMMPSSSQPKSDAGANAAVPLQDPYCAFLAQSMNMDLYHKMAALYRQ 402
Query: 207 QVKQNTIQQAACSPSMQSNHMQGD 230
V N Q SP SNH GD
Sbjct: 403 HV--NHKAQPTSSPP-HSNHDLGD 423
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/264 (57%), Positives = 170/264 (64%), Gaps = 47/264 (17%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKT--GRSHSSKRRRTAAVHNQSE 58
MMTW S ES +SLK KTTDEDSA HG SENQDED ETKT GRSHS++R R AA+HNQSE
Sbjct: 135 MMTWPSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSE 194
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
RRRRDRINQKMK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQVQMM +VRN M M
Sbjct: 195 RRRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMM-SVRNMPQMMMPM 253
Query: 119 MPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP-----PIYS 173
MQQQLQMSLLARM G G+G+ M +A R APQ+LP P+ +
Sbjct: 254 G---MQQQLQMSLLARM------GMGVGLGMGMGMLDMSAVPRAAPQTLPSLLHANPVVA 304
Query: 174 PA---------------------------ASVTLPDPYYAFLAQSMNVELYNKMAALFRQ 206
A+V L DPY AFLAQSMN++LY+KMAAL+RQ
Sbjct: 305 ATPTFVPPPFVVPPMMPSSSQPKSDAGANAAVPLQDPYCAFLAQSMNMDLYHKMAALYRQ 364
Query: 207 QVKQNTIQQAACSPSMQSNHMQGD 230
V N Q SP SNH GD
Sbjct: 365 HV--NHKAQPTSSPP-HSNHDLGD 385
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/227 (48%), Positives = 148/227 (65%), Gaps = 32/227 (14%)
Query: 2 MTWASYESLKSLKTKT-TDE-DSASHGRSENQDEDHETKTGRSH-SSKRRRTAAVHNQSE 58
T S+ S ++ KT T DE DS H + D+D + G+S S+KR R AA+HNQSE
Sbjct: 237 FTSTSFGSQENTKTATAVDENDSVCH----SDDDDKQKANGKSSVSTKRSRAAAIHNQSE 292
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RRD+INQ+MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQVQMM+ + N P +M
Sbjct: 293 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMSRM-NIQP---VM 348
Query: 119 MPLGMQQQLQMSLLARMGMGVGL-GTGMGMLDMNTMAAAAATARTAPQSLPPPIYSP--- 174
+P+ MQQQLQMS+LA M MG+GL G GM ++DMNT+ + A +P L P + P
Sbjct: 349 LPMTMQQQLQMSMLAPMNMGMGLAGIGMNVMDMNTI-SRPNIAGISP-VLHPTAFMPMTS 406
Query: 175 ------------AASVTLPDPYYAFLA---QSMNVELYNKMAALFRQ 206
A+ + DP AFLA Q M ++ Y++MAA+++Q
Sbjct: 407 WDGSSGGDRLQTASPTVMHDPLAAFLACQTQPMTMDAYSRMAAIYQQ 453
>gi|147864191|emb|CAN78817.1| hypothetical protein VITISV_041734 [Vitis vinifera]
Length = 367
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/264 (49%), Positives = 149/264 (56%), Gaps = 69/264 (26%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETK--TGRSHSSKRRRTAAVHNQSE 58
MMTW S ES +SLK KTTDEDSA HG SENQDED ETK TGRSHS++R R AA+HNQSE
Sbjct: 139 MMTWPSSESPRSLKAKTTDEDSACHGGSENQDEDRETKTQTGRSHSTRRSRAAAIHNQSE 198
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R TDKASMLDEVI+YLKQL+AQVQMM +VRN M M
Sbjct: 199 R----------------------TDKASMLDEVIEYLKQLQAQVQMM-SVRNMPQMMMPM 235
Query: 119 MPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP-----PIYS 173
MQQQLQMSLLARM G G+G+ M +A R APQ+LP P+ +
Sbjct: 236 G---MQQQLQMSLLARM------GMGVGLGMGMGMLDMSAVPRAAPQTLPSLLHANPVVA 286
Query: 174 PA---------------------------ASVTLPDPYYAFLAQSMNVELYNKMAALFRQ 206
A+V L DPY AFLAQSMN++LY+KMAAL+RQ
Sbjct: 287 ATPTFVPPPFVVPPMMPSSSQPKSDAGANAAVPLQDPYCAFLAQSMNMDLYHKMAALYRQ 346
Query: 207 QVKQNTIQQAACSPSMQSNHMQGD 230
V N Q SP SNH GD
Sbjct: 347 HV--NHKAQPTSSPP-HSNHDLGD 367
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 140/225 (62%), Gaps = 25/225 (11%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSH-SSKRRRTAAVHNQSERRRRDRINQ 67
S+ S D DS H R + +DE+ + G+S S+KR R AA+HNQSER+RRD+INQ
Sbjct: 174 SMGSQDNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQ 233
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
+MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQV MM+ R NMP M + M + QQQ
Sbjct: 234 RMKILQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS--RMNMPSMMLPMAMQQQQQQ 291
Query: 128 QMSLLAR--MGMGVGLG-TGMGMLDMNTMAAAAAT-------ARTAPQSLPP---PIYSP 174
L MG+G+G+G G+G+LD+N+M AAA A P P P +
Sbjct: 292 LQMSLMSNPMGLGIGMGMPGLGLLDLNSMNRAAAAATAPNIHANMMPNPFAPMTCPSWDA 351
Query: 175 AA------SVTLPDPYYAFLA---QSMNVELYNKMAALFRQQVKQ 210
++ S +PDP AFLA Q +E Y++MAAL++Q +Q
Sbjct: 352 SSNDARFQSPLIPDPMAAFLACSTQPTTMEAYSRMAALYQQMQQQ 396
>gi|297797077|ref|XP_002866423.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
gi|297312258|gb|EFH42682.1| hypothetical protein ARALYDRAFT_358332 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 146/254 (57%), Gaps = 30/254 (11%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS S +R R AA+HN
Sbjct: 158 MSWASFESARSLKTARTGDRDYIRSG-SETQDTEGDEQETRGEAGRS-SGRRGRAAAIHN 215
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 216 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQQ 274
Query: 116 NMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPPPI---- 171
MM+P Q +S+ + M+ +A A + +
Sbjct: 275 -MMIPQLPPPQSVLSIQHQQQQQQQQQQQQQQFQMSLLATMARMGMGGGGNGYGGLVPPP 333
Query: 172 --------------YSPAASVTLPDPYYAFLAQSMNVELYNKM-AALFRQQVKQNTIQQA 216
+ +S TL DPY AF AQ+MN++LYNKM AA++RQQ Q+T
Sbjct: 334 PPPPLMVPPMGNRDCTNGSSATLTDPYSAFFAQTMNMDLYNKMAAAIYRQQSDQSTKVNT 393
Query: 217 ACSPSMQSNHMQGD 230
PS SNH + D
Sbjct: 394 GM-PSSSSNHEKRD 406
>gi|359489230|ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 465
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 133/214 (62%), Gaps = 25/214 (11%)
Query: 14 KTKTTDE-DSASHGRSENQDEDHETK---TGRSHSSKRRR-TAAVHNQSERRRRDRINQK 68
KT T D+ DS H R + + D E K TG+S S +R AA+HNQSER+RRD+INQ+
Sbjct: 242 KTITVDDHDSVCHSRPQRRAGDEEDKKRGTGKSSVSSKRSRAAAIHNQSERKRRDKINQR 301
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQ 128
MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQVQMMN + + M M +QQQLQ
Sbjct: 302 MKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRMNMSPMMMPMT----LQQQLQ 357
Query: 129 MSLLAR-MGMGVGLGTGMGMLDMNTMAAA-AATARTAPQSLPPPIYS-----------PA 175
MSL+A+ GMG++DMNT+A AT +P P P PA
Sbjct: 358 MSLMAQMGMGMGMSPMGMGVVDMNTIARPNVATTGISPLLHPTPFLPLTSWDVSGDRLPA 417
Query: 176 ASVTLPDPYYAFLA---QSMNVELYNKMAALFRQ 206
A +PDP AFLA Q M ++ Y++MAAL++
Sbjct: 418 APTMVPDPLAAFLACQSQPMTMDAYSRMAALYQH 451
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 22/222 (9%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSH-SSKRRRTAAVHNQSERRRRDRINQ 67
S+ S D DS H R + +DE+ + G+S S+KR R AA+HNQSER+RRD+INQ
Sbjct: 172 SMGSHDNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQ 231
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
+MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQV MM+ R NMP M + M + QQQL
Sbjct: 232 RMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS--RMNMPSMMLPMAMQQQQQL 289
Query: 128 QMSLLAR--MGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP----PIYSPAASVT-- 179
QMSL++ G+G+LD+N+M AAA+A ++ P P+ P+ +
Sbjct: 290 QMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSN 349
Query: 180 --------LPDPYYAFLA---QSMNVELYNKMAALFRQQVKQ 210
+PDP AFLA Q +E Y++MA L++Q +Q
Sbjct: 350 DSRFQSPLIPDPMSAFLACSTQPTTMEAYSRMATLYQQMQRQ 391
>gi|312281909|dbj|BAJ33820.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/257 (43%), Positives = 147/257 (57%), Gaps = 35/257 (13%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS+ +R R AA+HN
Sbjct: 114 MSWASFESGRSLKTARTGDRDYLLSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 171
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 172 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQQ 230
Query: 116 NMMMPLGMQQQL---------------------QMSLLARMGMGVGLGTGMGMLDMNTMA 154
MM L Q + QMSLLA M +G G G +
Sbjct: 231 MMMQQLPPPQSVLSIQHQQQQQQQQQQQQQQQFQMSLLATMAR---MGMGGGGNAYGGLV 287
Query: 155 AAAATARTAPQSLPPPIYSPAASVTLPDPYYAFLAQSMNVELYNKM-AALFRQQVKQNTI 213
+ + +S L DPY +LAQ+MN++LYNKM AA++RQQ Q T
Sbjct: 288 PPPPPPPLMVPPMANRDCTSGSSPALTDPYSLYLAQTMNMDLYNKMAAAIYRQQSDQTTK 347
Query: 214 QQAACSPSMQSNHMQGD 230
A PS SNH + D
Sbjct: 348 VNAGM-PSSSSNHEKRD 363
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 105/158 (66%), Gaps = 16/158 (10%)
Query: 6 SYESLKSLKT----KTTDEDSASHGRSENQDEDHETK-----TGRSHSSKRRRTAAVHNQ 56
S E L+ ++T K ++ + + +DE +TK TGR ++KR R A VHNQ
Sbjct: 682 SIEPLQKVRTSNKRKCSEREETECQSEDGEDESVDTKHKPITTGRGSTTKRSRAAEVHNQ 741
Query: 57 SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN 116
SERRRRDRIN+KM+ALQ+L+PN++KTDKASMLDE IDYLK L+ Q+QMM ++R M
Sbjct: 742 SERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIDYLKILQLQLQMM-SIRTGMTLPP 800
Query: 117 MMMPLGMQ-----QQLQMSLLARMGMGVGLGTGMGMLD 149
M+MP G+Q Q Q++ + MGM V +G GMGM++
Sbjct: 801 MVMPPGLQHMQMPQMPQVAAMPSMGM-VQMGLGMGMME 837
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 135/216 (62%), Gaps = 22/216 (10%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSH-SSKRRRTAAVHNQSERRRRDRINQ 67
S+ S D DS H R + +DE+ + G+S S+KR R AA+HNQSER+RRD+INQ
Sbjct: 172 SMGSHDNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQ 231
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
+MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQV MM+ R NMP M + M + QQQL
Sbjct: 232 RMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS--RMNMPSMMLPMAMQQQQQL 289
Query: 128 QMSLLAR--MGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP----PIYSPAASVT-- 179
QMSL++ G+G+LD+N+M AAA+A ++ P P+ P+ +
Sbjct: 290 QMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSN 349
Query: 180 --------LPDPYYAFLA---QSMNVELYNKMAALF 204
+PDP AFLA Q +E Y++MA L+
Sbjct: 350 DSRFQSPLIPDPMSAFLACSTQPTTMEAYSRMATLY 385
>gi|297734539|emb|CBI16590.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 124/196 (63%), Gaps = 21/196 (10%)
Query: 27 RSENQDEDHETKTGRSHSSKRRR-TAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKA 85
R +ED + TG+S S +R AA+HNQSER+RRD+INQ+MK LQKLVPN+SKTDKA
Sbjct: 5 RRAGDEEDKKRGTGKSSVSSKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKA 64
Query: 86 SMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLAR-MGMGVGLGTG 144
SMLDEVI+YLKQL+AQVQMMN + + M M +QQQLQMSL+A+ G
Sbjct: 65 SMLDEVIEYLKQLQAQVQMMNRMNMSPMMMPM----TLQQQLQMSLMAQMGMGMGMSPMG 120
Query: 145 MGMLDMNTMAAA-AATARTAPQSLPPPIYS-----------PAASVTLPDPYYAFLA--- 189
MG++DMNT+A AT +P P P PAA +PDP AFLA
Sbjct: 121 MGVVDMNTIARPNVATTGISPLLHPTPFLPLTSWDVSGDRLPAAPTMVPDPLAAFLACQS 180
Query: 190 QSMNVELYNKMAALFR 205
Q M ++ Y++MAAL++
Sbjct: 181 QPMTMDAYSRMAALYQ 196
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 92/125 (73%), Gaps = 13/125 (10%)
Query: 6 SYESLKSLK--TKTT---DEDSASHGRSENQDEDHETK---TGRSH-SSKRRRTAAVHNQ 56
S E+ S K TKTT D DS SH + +D+D K G+S S+KR R AA+HNQ
Sbjct: 218 SLENTSSAKHCTKTTTVDDHDSVSHSKPVGEDQDEGKKKRANGKSSVSTKRSRAAAIHNQ 277
Query: 57 SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN 116
SER+RRD+INQ+MK LQKLVPN+SK+DKASMLDEVI+YLKQL+AQ+QM+N + NM +
Sbjct: 278 SERKRRDKINQRMKTLQKLVPNSSKSDKASMLDEVIEYLKQLQAQLQMINRI--NM--SS 333
Query: 117 MMMPL 121
MM+PL
Sbjct: 334 MMLPL 338
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 112/196 (57%), Gaps = 36/196 (18%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR R AA+HNQSER+RRD+INQ+MK LQKLVPN++KTDKASMLDEVI+YLKQL+AQ
Sbjct: 286 SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQ 345
Query: 102 VQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLAR----------------------MGMGV 139
VQMM+ + M MM+P+ MQQQL M+ L M
Sbjct: 346 VQMMSRM-----NMPMMLPIAMQQQLSMAPLMAPMGLGMGMGGMGMPLGMDHLNMMAGRS 400
Query: 140 GLGTGMGMLDMNTMAAAAATARTAPQSLPPPIYSPAASVTLPDPYYAFLA---QSMNVEL 196
GL GM L T T L +SP V DP+ FLA Q M +E
Sbjct: 401 GLTAGMSPLLHPTAFMPIPTWDGGTDQLQ---HSPTTMVA--DPFSTFLACQQQPMTMEA 455
Query: 197 YNKMAALFRQQVKQNT 212
YN++A +F QQ+ Q+T
Sbjct: 456 YNRIATMF-QQLHQHT 470
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 11/111 (9%)
Query: 14 KTKTTDE-DSASHGRSENQDEDHETKT-GRSH-SSKRRRTAAVHNQSERRRRDRINQKMK 70
KT T +E DS SH N DE+ + + G+S S+KR R AA+HNQSER+RRD+INQ+MK
Sbjct: 236 KTTTIEEHDSVSH----NGDEEKKKRANGKSSVSTKRSRAAAIHNQSERKRRDKINQRMK 291
Query: 71 ALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL 121
LQKLVPN+SKTDKASMLDEVI+YLKQL+AQVQMMN + NM +MM+PL
Sbjct: 292 TLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRI--NM--SSMMLPL 338
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 112/196 (57%), Gaps = 36/196 (18%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR R AA+HNQSER+RRD+INQ+MK LQKLVPN++KTDKASMLDEVI+YLKQL+AQ
Sbjct: 286 SVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNKTDKASMLDEVIEYLKQLQAQ 345
Query: 102 VQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLAR----------------------MGMGV 139
VQMM+ + M MM+P+ MQQQL M+ L M
Sbjct: 346 VQMMSRM-----NMPMMLPMAMQQQLSMAPLMAPMGLGMGMGGMGMPLGMDHLNMMAGRS 400
Query: 140 GLGTGMGMLDMNTMAAAAATARTAPQSLPPPIYSPAASVTLPDPYYAFLA---QSMNVEL 196
GL GM L T T L +SP V DP+ FLA Q M +E
Sbjct: 401 GLTAGMSPLLHPTAFMPIPTWDGGTDQLQ---HSPTTMVA--DPFSTFLACQQQPMTMEA 455
Query: 197 YNKMAALFRQQVKQNT 212
YN++A +F QQ+ Q+T
Sbjct: 456 YNRIATMF-QQLHQHT 470
>gi|449441077|ref|XP_004138310.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 321
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 21/202 (10%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAV-HNQSER 59
+MT AS ES ++ K+K + +D A ++ + + KT S S++R RTAA+ HNQ ER
Sbjct: 122 LMTEASLESHRTFKSKNSIQDLALEHDGSEKEYNMKGKTDGSCSNRRTRTAAINHNQYER 181
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMM 119
RRRDRINQ+MK LQKLVPN SKTD+AS+LD+ I YLKQL+AQVQ M+++R+ +PQ M+M
Sbjct: 182 RRRDRINQRMKDLQKLVPNGSKTDRASLLDDTIQYLKQLQAQVQFMDSIRSAVPQ--MVM 239
Query: 120 PLGMQQQLQMSLL--ARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPPPIYSPA-- 175
PLG+QQQ L ARMG+ +G M + +++ A T PQ P I S
Sbjct: 240 PLGIQQQQLQMSLLAARMGL-------LGAASMASSSSSFPCAATFPQIQLPSIVSTTKP 292
Query: 176 -------ASVTLPDPYYAFLAQ 190
A V DP+ FLAQ
Sbjct: 293 KSKLSTRAFVPPTDPFCTFLAQ 314
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 122/202 (60%), Gaps = 20/202 (9%)
Query: 15 TKTTDEDSASHGRSENQ--DEDHE-TKTGRSHSSKRRRTA--AVHNQSERRRRDRINQKM 69
T D DS SH S+ + DED++ TK RS S +R A VH QSERRRRD+INQ+M
Sbjct: 195 TTNDDRDSISHRISQGEVPDEDYKATKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRM 254
Query: 70 KALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQM 129
K LQKLVPN+SKTDKASMLDEVI Y+KQL+AQVQMMN ++ +MM+P+ MQQQ Q
Sbjct: 255 KELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMMNWMKM---YTSMMLPITMQQQQQQ 311
Query: 130 SLLARMGMGVGLGTGMG-----MLDMNTMAAAAATARTAPQSLPPPIYSPAASVTLPDPY 184
L M +G GMG +++MN+M P LP P + P A D
Sbjct: 312 QQLKMSMMMAQMGMGMGMSKDMVMNMNSMNIPG-----FPPMLPFPSFMPMAPCG--DQL 364
Query: 185 YAFLAQSMNVELYNKMAALFRQ 206
+S+ ++ Y+ MA+L++Q
Sbjct: 365 QGTPEKSVTMDAYSTMASLYQQ 386
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 6/123 (4%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETK-----TGRSHSSKRRRTAAVHNQSERRRR 62
E + K K+++ + + +DE +TK TGR ++KR R A VHNQSERRRR
Sbjct: 549 EPVTGTKRKSSEREEPECQSEDMEDESVDTKQKPATTGRVSTTKRSRAAEVHNQSERRRR 608
Query: 63 DRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLG 122
DRIN+KM+ALQ+L+PN++KTDKASMLDE I+YLK L+ Q+QMM ++R M M+MP G
Sbjct: 609 DRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQMM-SIRTGMTLPPMVMPPG 667
Query: 123 MQQ 125
+Q
Sbjct: 668 LQH 670
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 110/191 (57%), Gaps = 36/191 (18%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR R AA+HN+SER+RRDRINQKMK LQKLVPN+SKTDKASMLDEVIDYLKQL+AQ
Sbjct: 268 SISTKRSRAAAIHNESERKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQ 327
Query: 102 VQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATAR 161
VQ+M+ + + M M M QLQMS++A+M + G+ M++M A
Sbjct: 328 VQVMSRMGSMMMPMGM-----AMPQLQMSVMAQMAQMAQI--GLSMMNMGQAGGYAPMHM 380
Query: 162 TAPQSLP-----------------PPIYSPAASVTLPDPYYAFLAQSM---------NVE 195
P LP PP + AA+ D + AFLA +E
Sbjct: 381 HTPPFLPVSWDAAASSSSAAAADRPPQPTGAATS---DAFSAFLASQAAQQNAQQPNGME 437
Query: 196 LYNKMAALFRQ 206
YN+M A++++
Sbjct: 438 AYNRMMAMYQK 448
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 5 ASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDR 64
AS + SL+ + D + ++ S++ +E+ + S SKRRR +HN SER+RRDR
Sbjct: 332 ASNDPTSSLERQYEDTEGTAYS-SDDLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDR 390
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGM 123
IN+KM+ALQ L+PN++K DKASML E IDYLK L+ QVQMM+ R MP MM+P GM
Sbjct: 391 INKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSMGTRLCMPL--MMLPTGM 448
Query: 124 QQQLQMSLLARMG-MGVGLGT 143
Q + LLA+ MGVG+ T
Sbjct: 449 -QHIHAPLLAQFSPMGVGMDT 468
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 5 ASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDR 64
AS + SL+ + D + ++ S++ +E+ + S SKRRR +HN SER+RRDR
Sbjct: 338 ASNDPTSSLERQYEDTEGTAYS-SDDLEEEEQVPARGSAGSKRRRATEIHNLSERKRRDR 396
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGM 123
IN+KM+ALQ L+PN++K DKASML E IDYLK L+ QVQMM+ R MP MM+P GM
Sbjct: 397 INKKMRALQDLIPNSNKVDKASMLGEAIDYLKSLQLQVQMMSMGTRLCMPL--MMLPTGM 454
Query: 124 QQQLQMSLLARMG-MGVGLGT 143
Q + LLA+ MGVG+ T
Sbjct: 455 -QHIHAPLLAQFSPMGVGMDT 474
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 79/114 (69%), Gaps = 7/114 (6%)
Query: 43 HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
+SSKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QV
Sbjct: 119 NSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 178
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAA 156
QM+ +RN + M +P G+ Q +Q+ L G+ G G+L+ N+ A
Sbjct: 179 QML-TMRNGLSLHPMCLP-GVLQPMQLPL-----TGMSFDEGGGLLNTNSATGA 225
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 90/134 (67%), Gaps = 21/134 (15%)
Query: 22 SASHGRSENQDEDHETKT-----------------GRSHSSKRRRTAAVHNQSERRRRDR 64
S+S G SEN+ ++++ ++ GRS SSKR R A VHN SE+RRR R
Sbjct: 115 SSSFGASENETDEYDCESEEGLEALVEEAAGKPGCGRS-SSKRSRAAEVHNMSEKRRRSR 173
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQ 124
IN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++RN M M +P G
Sbjct: 174 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SMRNGMSLHPMCLP-GAL 231
Query: 125 QQLQMSLLARMGMG 138
Q +Q+S + RM +G
Sbjct: 232 QPVQVSQM-RMDLG 244
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 16/137 (11%)
Query: 32 DEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
DED + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKAS
Sbjct: 302 DEDLDDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKAS 361
Query: 87 MLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP--LGMQQQLQMSLLARM---GMGVGL 141
ML+E I+YLK L+ QVQMM + M M MP L M Q +QM +A +G +
Sbjct: 362 MLEEAIEYLKTLQLQVQMM----STMGTAGMCMPPMLAM-QHMQMPPMAHFHHHHLGA-M 415
Query: 142 GTGMGMLDMNTMAAAAA 158
G GMG D +AAA A
Sbjct: 416 GFGMGPFDPRLVAAAGA 432
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 16/137 (11%)
Query: 32 DEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
DED + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKAS
Sbjct: 302 DEDLDDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKAS 361
Query: 87 MLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP--LGMQQQLQMSLLARM---GMGVGL 141
ML+E I+YLK L+ QVQMM + M M MP L M Q +QM +A +G +
Sbjct: 362 MLEEAIEYLKTLQLQVQMM----STMGTAGMCMPPMLAM-QHMQMPPMAHFHHHHLGA-M 415
Query: 142 GTGMGMLDMNTMAAAAA 158
G GMG D +AAA A
Sbjct: 416 GFGMGPFDPRLVAAAGA 432
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 16/137 (11%)
Query: 32 DEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
DED + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKAS
Sbjct: 306 DEDLDDEAGGLRRSAARSTKRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKAS 365
Query: 87 MLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP--LGMQQQLQMSLLARM---GMGVGL 141
ML+E I+YLK L+ QVQMM + M M MP L M Q +QM +A +G +
Sbjct: 366 MLEEAIEYLKTLQLQVQMM----STMGTAGMCMPPMLAM-QHMQMPPMAHFHHHHLGA-M 419
Query: 142 GTGMGMLDMNTMAAAAA 158
G GMG D +AAA A
Sbjct: 420 GFGMGPFDPRLVAAAGA 436
>gi|62318640|dbj|BAD95106.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 278
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 10/125 (8%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS+ +R R AA+HN
Sbjct: 27 MSWASFESGRSLKTARTGDRDYFRSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 84
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 85 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQ- 142
Query: 116 NMMMP 120
MM+P
Sbjct: 143 QMMIP 147
>gi|79331774|ref|NP_001032117.1| transcription factor PIF7 [Arabidopsis thaliana]
gi|9757848|dbj|BAB08482.1| unnamed protein product [Arabidopsis thaliana]
gi|45935023|gb|AAS79546.1| At5g61270 [Arabidopsis thaliana]
gi|46367462|emb|CAG25857.1| hypothetical protein [Arabidopsis thaliana]
gi|332010063|gb|AED97446.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 278
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 10/125 (8%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS+ +R R AA+HN
Sbjct: 27 MSWASFESGRSLKTARTGDRDYFRSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 84
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 85 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQ- 142
Query: 116 NMMMP 120
MM+P
Sbjct: 143 QMMIP 147
>gi|32527639|gb|AAP86213.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 277
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 10/125 (8%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS+ +R R AA+HN
Sbjct: 27 MSWASFESGRSLKTARTGDRDYFRSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 84
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 85 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQ- 142
Query: 116 NMMMP 120
MM+P
Sbjct: 143 QMMIP 147
>gi|42568685|ref|NP_200935.2| transcription factor PIF7 [Arabidopsis thaliana]
gi|182676517|sp|Q570R7.2|PIF7_ARATH RecName: Full=Transcription factor PIF7; AltName: Full=Basic
helix-loop-helix protein 72; Short=AtbHLH72; Short=bHLH
72; AltName: Full=Phytochrome-interacting factor 7;
AltName: Full=Transcription factor EN 109; AltName:
Full=bHLH transcription factor bHLH072
gi|225879146|dbj|BAH30643.1| hypothetical protein [Arabidopsis thaliana]
gi|332010062|gb|AED97445.1| transcription factor PIF7 [Arabidopsis thaliana]
Length = 366
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 10/125 (8%)
Query: 2 MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
M+WAS+ES +SLKT +T D D G SE QD ++ ET+ GRS+ +R R AA+HN
Sbjct: 115 MSWASFESGRSLKTARTGDRDYFRSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 172
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
+SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ
Sbjct: 173 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQQ 231
Query: 116 NMMMP 120
MM+P
Sbjct: 232 -MMIP 235
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 82/122 (67%), Gaps = 11/122 (9%)
Query: 11 KSLKTKTTD-EDSASHGRSEN-QDEDHETKTGRSH----SSKRRRTAAVHNQSERRRRDR 64
+ LK K+ D EDS H SE+ +DE K G + SKR R A VHN SERRRRDR
Sbjct: 426 RDLKRKSRDTEDSECH--SEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDR 483
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGM 123
IN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM+ MPQ MM+P GM
Sbjct: 484 INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQ--MMLPAGM 541
Query: 124 QQ 125
Q
Sbjct: 542 QH 543
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 43 HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
+SSKR R+A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QV
Sbjct: 190 NSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 249
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGM 145
QM+ ++RN + M +P GM Q +Q L +MG+ +G
Sbjct: 250 QML-SMRNGLSLQPMCLP-GMLQPIQ---LPQMGLDYDVGNAF 287
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E+ TK SSKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I
Sbjct: 158 EELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAI 217
Query: 93 DYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMG 138
+YLKQL+ QVQM+ ++RN + M +P G Q LQ+S + RM G
Sbjct: 218 EYLKQLQLQVQML-SMRNGLSLHPMNLP-GSLQYLQLSHM-RMDFG 260
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 89/148 (60%), Gaps = 18/148 (12%)
Query: 12 SLKTKTTDEDSASHGRSENQDEDHETKTGRSHS--------SKRRRTAAVHNQSERRRRD 63
SLK K +D SE+ +E E+ GR + SKR R+A VHN SERRRRD
Sbjct: 298 SLKRKHSDIQDIDCRHSEDVEE--ESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRD 355
Query: 64 RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN-NMPQMNMMMPLG 122
RIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP +M P G
Sbjct: 356 RINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPP--VMFPPG 413
Query: 123 MQQQLQMSLLARMGMGVGLGTGMGMLDM 150
M A M MG+G+ MG+ D+
Sbjct: 414 MGH-----YPAAMAMGMGMPYAMGLPDL 436
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E+ TK SSKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I
Sbjct: 158 EELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAI 217
Query: 93 DYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMG 138
+YLKQL+ QVQM+ ++RN + M +P G Q LQ+S + RM G
Sbjct: 218 EYLKQLQLQVQML-SMRNGLSLHPMNLP-GSLQYLQLSHM-RMDFG 260
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE T+ + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DK+SML+E
Sbjct: 305 DEPGATRRSAARSAKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKSSMLEEA 364
Query: 92 IDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQL 127
I+YLK L+ QVQMM+ MP M++P MQQQL
Sbjct: 365 IEYLKTLQLQVQMMSMGTGLCMPPAAMLLP-AMQQQL 400
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
Query: 5 ASYESLKSLKTKTTD-EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRD 63
S E ++LK KT D +DS H E+ SKR R A VHN SERRRRD
Sbjct: 326 GSDEPNQNLKRKTKDTDDSECHSEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSERRRRD 385
Query: 64 RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLG 122
RIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP MM+P G
Sbjct: 386 RINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPP--MMLPAG 443
Query: 123 MQQ 125
MQ
Sbjct: 444 MQH 446
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 12/174 (6%)
Query: 21 DSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
+S + G SE + E G S SKR R A VHN SE+RRR RIN+KMKALQ L+PN++
Sbjct: 79 ESEAGGSSEPEPHSSERPRGGS-GSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSN 137
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMS-LLARMGMG- 138
KTDKASMLDE I+YLKQL+ QVQM+ ++RN + +N G + +Q S + A +G+G
Sbjct: 138 KTDKASMLDEAIEYLKQLQLQVQML-SMRNGV-YLNPSYLSGALEPMQASQMFAALGVGG 195
Query: 139 -----VGLGTGMGMLDMNTMAAAAATA-RTAPQSLPPPIYSPAA-SVTLPDPYY 185
G + ++ NT A + + PQ+ PP+ P+ + T+P+P +
Sbjct: 196 RNVTAANPGGVVPPVNQNTGAHHSFDPMNSPPQNQQPPLVLPSCPNATIPEPSF 249
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 43 HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
+SSKR R+A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QV
Sbjct: 190 NSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 249
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGM 145
QM+ ++RN + M +P GM Q +Q L +MG+ +G
Sbjct: 250 QML-SMRNGLSLQPMCLP-GMLQPIQ---LPQMGLDYDVGNAF 287
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 78/107 (72%), Gaps = 5/107 (4%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQ
Sbjct: 134 SSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 193
Query: 104 MMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDM 150
M+ ++RN + M +P G+ +Q+S +M +G+G G +DM
Sbjct: 194 ML-SMRNGLSLHPMCLP-GVLPPVQLS---QMRIGIGEENGSLHMDM 235
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
T D D S E +E + RS S+KR R A VHN SE+RRR RIN+KMKALQ
Sbjct: 151 TDLDDLDCESEEGQEPSEEMSKPAPSRS-STKRSRAAEVHNLSEKRRRSRINEKMKALQN 209
Query: 75 LVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLAR 134
L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++++ + M MP G Q +Q+ +
Sbjct: 210 LIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SMKSGINLAPMCMP-GQLQSMQLPQIC- 266
Query: 135 MGMGVGLGT-----GMGMLDMN 151
MG GT GMG+L +N
Sbjct: 267 MGFTTENGTLPITMGMGLLPVN 288
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 76/103 (73%), Gaps = 5/103 (4%)
Query: 43 HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
+SSKR R+A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QV
Sbjct: 190 NSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQV 249
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGM 145
QM+ ++RN + M +P G+ Q +Q L +MG+ +G
Sbjct: 250 QML-SMRNGLSLQPMCLP-GVLQPIQ---LPQMGLDFDVGNAF 287
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 7/113 (6%)
Query: 28 SENQDEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
S +QDED + ++G + S KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 379 SASQDEDLDDESGALLRSTNRSMKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 438
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARM 135
DKASMLDE I+YLK L+ QVQMM ++ + M++P M Q LQ+S +A
Sbjct: 439 DKASMLDEAIEYLKTLQLQVQMM-SMGTGLCIPPMLLPPAM-QHLQLSQMAHF 489
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 109/209 (52%), Gaps = 26/209 (12%)
Query: 28 SENQDEDHETKTG---------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
SE+ ED E+++ + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 298 SESPSEDAESESAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPH 357
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMG 138
+KTDKASMLDE I+YLK L+ QVQMM +M P G+ Q L+RMG+G
Sbjct: 358 CNKTDKASMLDEAIEYLKSLQLQVQMMWMGSGIAAPPAVMFP-GVHQ-----YLSRMGVG 411
Query: 139 VGLGTGM-GMLDMNTMAAAAATARTAPQSLPPPIYS-----PAASVTLPDPYYAFLA--- 189
+G M M + MAA Q P P Y PAA V + +PY +L
Sbjct: 412 MGPAAAMPSMPRLPFMAAPQPVVPPNAQVNPVPGYRGHHHMPAA-VGMAEPYGHYLGVNH 470
Query: 190 -QSMNVELYNKMAALFRQQVKQNTIQQAA 217
Q + Y + + + +QQ A
Sbjct: 471 LQPPPSQHYAQGVGYYPPPLGAKAVQQQA 499
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 7/113 (6%)
Query: 28 SENQDEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
S +QD+D + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 358 SASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 417
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARM 135
DKASMLDE I+YLK L+ QVQMM ++ + M++P M Q LQ+ +A
Sbjct: 418 DKASMLDEAIEYLKTLQLQVQMM-SMGTGLCIPPMLLPTAM-QHLQIPPMAHF 468
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 7/113 (6%)
Query: 28 SENQDEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
S +QD+D + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 286 SASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 345
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARM 135
DKASMLDE I+YLK L+ QVQMM ++ + M++P M Q LQ+ +A
Sbjct: 346 DKASMLDEAIEYLKTLQLQVQMM-SMGTGLCIPPMLLPTAM-QHLQIPPMAHF 396
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 85/131 (64%), Gaps = 12/131 (9%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGR-----SHSSKRRRTAAVHNQSERRRR 62
ES + K KT + S +QD+D + ++G S +KR RTA VHN SERRRR
Sbjct: 343 ESWRQQKRKTLQAEC-----SASQDDDPDDESGGMRRSCSRGAKRSRTAEVHNLSERRRR 397
Query: 63 DRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLG 122
DRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM ++ + + M++P
Sbjct: 398 DRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM-SMGSGLCIPPMLLPPA 456
Query: 123 MQQQLQMSLLA 133
M Q LQ+ A
Sbjct: 457 M-QHLQIPPAA 466
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE+ D ET + ++KRRR A VHN SERRRRDRIN+KM+ALQ+LVP+ +KTDKASM
Sbjct: 217 SESADVTCETAQ-KPATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNKTDKASM 275
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQ 128
LDE I+YLK L+ Q+Q+M + M +M P G Q +Q
Sbjct: 276 LDEAIEYLKSLQLQLQVMWAMGGRMAPAPVMFPAGAHQYMQ 316
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
ES + K KT + ++ + DE + S +KR RTA VHN SERRRRDRIN+
Sbjct: 140 ESWRQQKRKTLQAECSASQDDDPDDESGGMRRSCSRGAKRSRTAEVHNLSERRRRDRINE 199
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQ 124
KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM ++ + + M++P MQ
Sbjct: 200 KMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM-SMGSGLCIPPMLLPPAMQ 255
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 85/128 (66%), Gaps = 11/128 (8%)
Query: 5 ASYESLKSLKTKTTD-EDSASHGRSENQDED----HETKTGRSHS-SKRRRTAAVHNQSE 58
S E ++LK K D +DS H SE+ +E+ +T GR + SKR R A VHN SE
Sbjct: 387 GSEEPNQNLKRKRKDTDDSECH--SEDVEEESAGAKKTAGGRGGAGSKRSRAAEVHNLSE 444
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNM 117
R+RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP M
Sbjct: 445 RKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPP--M 502
Query: 118 MMPLGMQQ 125
M+P GMQ
Sbjct: 503 MLPAGMQH 510
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 98/149 (65%), Gaps = 5/149 (3%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
ES + K K+ E SAS + DE + +KR RTA VHN SERRRRDRIN+
Sbjct: 312 ESWREQKRKSQAECSASQ-DDDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINE 370
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM + + + M++P M QL
Sbjct: 371 KMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM-AMGSGLCIPPMLLPRAM--QL 427
Query: 128 QMSLLARM-GMGVGLGTGMGMLDMNTMAA 155
Q+ +A +G+GLG GMG+LDMN+ AA
Sbjct: 428 QIPSIAHFHHLGMGLGYGMGVLDMNSTAA 456
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 7/113 (6%)
Query: 28 SENQDEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
S +QD+D + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 426 SASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 485
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARM 135
DKASMLDE I+YLK L+ QVQMM ++ + M++P M Q LQ+ +A
Sbjct: 486 DKASMLDEAIEYLKTLQLQVQMM-SMGTGLCIPPMLLPTAM-QHLQIPPMAHF 536
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 78/113 (69%), Gaps = 7/113 (6%)
Query: 28 SENQDEDHETKTG-----RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
S +QD+D + + G + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 414 SASQDDDLDDEPGVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKI 473
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARM 135
DKASMLDE I+YLK L+ QVQMM ++ + M++P M Q LQ+ +A
Sbjct: 474 DKASMLDEAIEYLKTLQLQVQMM-SMGTGLCIPPMLLPTAM-QHLQIPPMAHF 524
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 6/102 (5%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
++ ++KRRR A VHN SERRRRDRIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+
Sbjct: 270 KTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQL 329
Query: 101 QVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLG 142
Q+QMM P+ M G+ Q +Q RMG VG+G
Sbjct: 330 QLQMMWMGGGMAPRAVMFPAAGVHQYMQ-----RMG-AVGMG 365
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 78/123 (63%), Gaps = 13/123 (10%)
Query: 21 DSASHGRSENQDEDH---ETKTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLV 76
D R E+ D+ ET+T R + KRR R A VHNQSERRRRDRIN+KMKALQ+LV
Sbjct: 111 DELDDSRCEDADDCEAVDETRTSRRPAGKRRARAAEVHNQSERRRRDRINEKMKALQELV 170
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMG 136
P+ +K+DKAS+LDE I+YLK L+ QVQ+M P MM P Q L+ +M
Sbjct: 171 PHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTGMAP---MMFPGAHQ------LMPQMA 221
Query: 137 MGV 139
MG+
Sbjct: 222 MGL 224
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 98/149 (65%), Gaps = 5/149 (3%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
ES + K K+ E SAS + DE + +KR RTA VHN SERRRRDRIN+
Sbjct: 122 ESWREQKRKSQAECSASQD-DDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINE 180
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM + + + M++P M QL
Sbjct: 181 KMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM-AMGSGLCIPPMLLPRAM--QL 237
Query: 128 QMSLLARM-GMGVGLGTGMGMLDMNTMAA 155
Q+ +A +G+GLG GMG+LDMN+ AA
Sbjct: 238 QIPSIAHFHHLGMGLGYGMGVLDMNSTAA 266
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
++ ++KRRR A VHN SERRRRDRIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+
Sbjct: 261 KTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQL 320
Query: 101 QVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLG 142
Q+QMM P M G+ Q +Q RMG VG+G
Sbjct: 321 QLQMMWMGGGMAPPAVMFPAAGVHQYMQ-----RMG-AVGMG 356
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 6/102 (5%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
++ ++KRRR A VHN SERRRRDRIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+
Sbjct: 261 KTTTAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQL 320
Query: 101 QVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLG 142
Q+QMM P M G+ Q +Q RMG VG+G
Sbjct: 321 QLQMMWMGGGMAPPAVMFPAAGVHQYMQ-----RMG-AVGMG 356
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 96/173 (55%), Gaps = 20/173 (11%)
Query: 28 SENQDEDHETKTG---------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
SE+ ED E+ + + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 303 SESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPH 362
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMG 138
+KTDKASMLDE I+YLK L+ QVQMM + +M G+ Q L RMG+G
Sbjct: 363 CNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQ-----YLPRMGVG 417
Query: 139 VGLGTGMGMLDMNTMA--AAAATARTAPQSLPP-PIYS---PAASVTLPDPYY 185
+G + M + A +AP S+ P P Y PA +T P +Y
Sbjct: 418 MGAAAAAALPSMPRLPFMAPQPVVPSAPVSVGPVPAYRGHMPAVGITEPYGHY 470
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 3/94 (3%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQ
Sbjct: 156 SSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 215
Query: 104 MMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGM 137
M+ ++RN + M +P G+ Q Q S + MG
Sbjct: 216 ML-SLRNGIGLHPMCLP-GVLQPTQFSQFS-MGF 246
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 96/173 (55%), Gaps = 20/173 (11%)
Query: 28 SENQDEDHETKTG---------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
SE+ ED E+ + + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 303 SESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPH 362
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMG 138
+KTDKASMLDE I+YLK L+ QVQMM + +M G+ Q L RMG+G
Sbjct: 363 CNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQ-----YLPRMGVG 417
Query: 139 VGLGTGMGMLDMNTMA--AAAATARTAPQSLPP-PIYS---PAASVTLPDPYY 185
+G + M + A +AP S+ P P Y PA +T P +Y
Sbjct: 418 MGAAAAAALPSMPRLPFMAPQPVVPSAPVSVGPVPAYRGHMPAVGITEPYGHY 470
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 58/62 (93%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR R AA+HN+SER+RRDRINQKM+ LQKLVPN+SKTDKASMLDEVI++LKQL+AQ
Sbjct: 253 SISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQAQ 312
Query: 102 VQ 103
VQ
Sbjct: 313 VQ 314
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 58/62 (93%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR R AA+HN+SER+RRDRINQKM+ LQKLVPN+SKTDKASMLDEVI++LKQL+AQ
Sbjct: 253 SISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIEHLKQLQAQ 312
Query: 102 VQ 103
VQ
Sbjct: 313 VQ 314
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 10/131 (7%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKAL 72
K + D+ + +E ++ ETK R + +KRR R A VHN SERRRRDRIN+KM+AL
Sbjct: 288 KGRCRDDSDSPSEDAECEEASEETKPSRRYGTKRRTRAAEVHNLSERRRRDRINEKMRAL 347
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL 132
Q+L+P+ +KTDKAS+LDE I+YLK L+ QVQ+M P MM P G+ Q +
Sbjct: 348 QELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAP---MMFP-GVHQ-----FI 398
Query: 133 ARMGMGVGLGT 143
+M +G+ G
Sbjct: 399 PQMALGMNPGC 409
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE T+ + S+KR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASML+E
Sbjct: 244 DEPGATRRSAARSAKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKASMLEEA 303
Query: 92 IDYLKQLKAQVQMMN-NVRNNMPQMNMMMP 120
I+YLK L+ QVQMM+ MP M++P
Sbjct: 304 IEYLKTLQLQVQMMSMGTGLCMPPAAMLLP 333
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 56/60 (93%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
S+KR R AA+HN+SER+RRDRINQKM+ LQKLVPN+SKTDKASMLDEVID+LKQL+A VQ
Sbjct: 257 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 56/60 (93%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
S+KR R AA+HN+SER+RRDRINQKM+ LQKLVPN+SKTDKASMLDEVID+LKQL+A VQ
Sbjct: 257 STKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSKTDKASMLDEVIDHLKQLQATVQ 316
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVPN 78
+DS S + ETK+ R H SKRR R A VHNQSERRRRDRIN+KM++LQ+L+P+
Sbjct: 176 DDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPH 235
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMM 105
+K DKAS+LDE I+YLK L+ QVQ+M
Sbjct: 236 CNKADKASILDEAIEYLKSLQMQVQVM 262
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVPN 78
+DS S + ETK+ R H SKRR R A VHNQSERRRRDRIN+KM++LQ+L+P+
Sbjct: 167 DDSDSRSEDVECEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPH 226
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMM 105
+K DKAS+LDE I+YLK L+ QVQ+M
Sbjct: 227 CNKADKASILDEAIEYLKSLQMQVQVM 253
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 77/119 (64%), Gaps = 15/119 (12%)
Query: 20 EDSASHGR----SENQDEDHETKTGR-------SHSSKRRRTAAVHNQSERRRRDRINQK 68
+D GR +E Q ED E ++ S S+KR R A VHN SERRRRDRIN+K
Sbjct: 276 DDRKRKGRALDDTECQSEDVEYESADPKKQLRGSTSTKRSRAAEVHNLSERRRRDRINEK 335
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
MKALQ+L+P +KTDKASMLDE I+YLK L+ QVQMM+ MP MM P G+QQ L
Sbjct: 336 MKALQELIPRCNKTDKASMLDEAIEYLKTLQLQVQMMSMGCGMMP---MMFP-GVQQYL 390
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 82/134 (61%), Gaps = 13/134 (9%)
Query: 12 SLKTKTTD-EDSASHGRSENQDEDH---ETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
S K KT D EDS + D D T RS S++R R A VHN SERRRRDRIN+
Sbjct: 145 SQKRKTIDTEDSEYQSEAAELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINE 204
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
KM+ALQ+L+P+ KTDKASMLDE I+YLK L+ Q+Q+M P M+ P G+Q
Sbjct: 205 KMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAP---MLFP-GVQH-- 258
Query: 128 QMSLLARMGMGVGL 141
++RMGMG L
Sbjct: 259 ---FMSRMGMGPPL 269
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 78/113 (69%), Gaps = 9/113 (7%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
+E + D + R+ SSKR R A VHNQSERRRRDRIN+KM+ LQ+L+PN++KTDKASM
Sbjct: 339 TELKSADGNKASQRTGSSKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASM 398
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG 140
L+E I+YLK L+ Q+Q+M P +M P G+Q +++MGMG+G
Sbjct: 399 LEEAIEYLKSLQFQLQVMWMGSGMTP---VMFP-GIQH-----YMSQMGMGMG 442
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVPN 78
+DS S + ETK+ R H SKRR R A VHNQSERRRRDRIN+KM++LQ+L+P+
Sbjct: 205 DDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQELIPH 264
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMM 105
+K DKAS+LDE I+YLK L+ Q+Q+M
Sbjct: 265 CNKADKASILDEAIEYLKSLQMQLQIM 291
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 82/125 (65%), Gaps = 9/125 (7%)
Query: 5 ASYESLKSLKTKTTDEDSASHGRSENQDED-----HETKTGRSHSSKRRRTAAVHNQSER 59
AS + ++LK K D + S G SE+ +E+ + + SKR R A VHN SER
Sbjct: 409 ASDDPTENLKRKHRDTEE-SEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSER 467
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMM 118
RRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP +MM
Sbjct: 468 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMP--SMM 525
Query: 119 MPLGM 123
+P GM
Sbjct: 526 LPPGM 530
>gi|168027682|ref|XP_001766358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682267|gb|EDQ68686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 64/77 (83%), Gaps = 3/77 (3%)
Query: 31 QDEDHETK---TGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
+DE +TK TGR ++KR R A VHNQSERRRRDRIN+KM+ALQ+L+PN++KTDKASM
Sbjct: 2 EDESVDTKKPVTGRGSTAKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASM 61
Query: 88 LDEVIDYLKQLKAQVQM 104
LDE I+YLK L+ Q+Q+
Sbjct: 62 LDEAIEYLKMLQLQLQV 78
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED----HETKTGRS-HSSKRRRTAAVHNQSERR 60
S + ++LK K D + S G SE+ +E+ + + R+ + SKR R A VHN SERR
Sbjct: 274 SDDPTENLKRKHRDTEE-SEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 332
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M ++ M +MM+P
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM-SMGAGMYMPSMMLP 391
Query: 121 LGM 123
GM
Sbjct: 392 PGM 394
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED----HETKTGRS-HSSKRRRTAAVHNQSERR 60
S + ++LK K D + S G SE+ +E+ + + R+ + SKR R A VHN SERR
Sbjct: 274 SDDPTENLKRKHRDTEE-SEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 332
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M ++ M +MM+P
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM-SMGAGMYMPSMMLP 391
Query: 121 LGM 123
GM
Sbjct: 392 PGM 394
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 7/103 (6%)
Query: 53 VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ +RN +
Sbjct: 127 VHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TMRNGL 185
Query: 113 PQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAA 155
M +P G Q +Q+ L G+ G+G+L NT+
Sbjct: 186 SLHPMCLP-GALQPMQLPL-----SGMSFDEGIGLLTTNTLTG 222
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED----HETKTGRS-HSSKRRRTAAVHNQSERR 60
S + ++LK K D + S G SE+ +E+ + + R+ + SKR R A VHN SERR
Sbjct: 274 SDDPTENLKRKHRDTEE-SEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 332
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M ++ M +MM+P
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM-SMGAGMYMPSMMLP 391
Query: 121 LGM 123
GM
Sbjct: 392 PGM 394
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED----HETKTGRS-HSSKRRRTAAVHNQSERR 60
S + ++LK K D + S G SE+ +E+ + + R+ + SKR R A VHN SERR
Sbjct: 274 SDDPTENLKRKHRDTEE-SEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 332
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M ++ M +MM+P
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM-SMGAGMYMPSMMLP 391
Query: 121 LGM 123
GM
Sbjct: 392 PGM 394
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 75/109 (68%), Gaps = 8/109 (7%)
Query: 23 ASHGRSENQDEDHETKTGRSH----SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
A +++D D E+ + + S+KR R A VHN SERRRRDRIN+KMKALQ+L+P
Sbjct: 228 AEEWEYQSEDVDFESAEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPR 287
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
++K+DKASMLDE IDYLK L+ QVQMM+ +P MM P G+QQ +
Sbjct: 288 SNKSDKASMLDEAIDYLKSLQLQVQMMSMGCGMVP---MMFP-GIQQYM 332
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 502
Query: 105 MNNVRNNMPQMNMMMPLGMQQ 125
M ++ + MM+P GMQ
Sbjct: 503 M-SMGTGLCMPPMMLPTGMQH 522
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 78/113 (69%), Gaps = 9/113 (7%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
+E + D + R+ SS+R R A VHNQSERRRRDRIN+KM+ LQ+L+PN++KTDKASM
Sbjct: 339 TELKSADGNKASQRTRSSRRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNKTDKASM 398
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG 140
L+E I+YLK L+ Q+Q+M P +M P G+Q +++MGMG+G
Sbjct: 399 LEEAIEYLKSLQFQLQVMWMGGGMTP---VMFP-GIQH-----YMSQMGMGMG 442
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 8/142 (5%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
T D + S E+ E+ + + + SSKR R A VHN SE+RRR+RIN+KMKALQ L+
Sbjct: 124 TKDIECQSQKAQEDSGENFKQCSTGTSSSKRSRAAEVHNLSEKRRRNRINEKMKALQNLI 183
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM----MMP-LGMQQ--QLQM 129
PN++KTDKASMLDE I+YLK+L+ QVQM+ + R+ + +M MP L +QQ + M
Sbjct: 184 PNSNKTDKASMLDEAIEYLKKLQLQVQML-SARSGIDISSMRWLAQMPHLQIQQMPKACM 242
Query: 130 SLLARMGMGVGLGTGMGMLDMN 151
+ G+ + + G G+++ N
Sbjct: 243 TTDQHAGVSISMPVGSGLMNTN 264
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 84/124 (67%), Gaps = 9/124 (7%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED----HETKTGRS-HSSKRRRTAAVHNQSERR 60
S + ++LK K D + S G SE+ +E+ + + R+ + SKR R A VHN SERR
Sbjct: 274 SDDPTENLKRKHRDTEE-SEGPSEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERR 332
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMM 119
RRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP +MM+
Sbjct: 333 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGIYMP--SMML 390
Query: 120 PLGM 123
P GM
Sbjct: 391 PPGM 394
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 517
Query: 105 MNNVRNNMPQMNMMMPLGMQQ 125
M ++ + MM+P GMQ
Sbjct: 518 M-SMGTGLCMPPMMLPTGMQH 537
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 381
Query: 105 MNNVRNNMPQMNMMMPLGMQQ 125
M ++ + MM+P GMQ
Sbjct: 382 M-SMGTGLCMPPMMLPTGMQH 401
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 92/174 (52%), Gaps = 22/174 (12%)
Query: 25 HGRSENQDEDHETKTGR-------SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVP 77
H SE Q ED + ++ S S+KR R A VHN SERRRRDRIN+KMKALQ+L+P
Sbjct: 232 HEESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIP 291
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGM 137
+K+DKASMLDE I+YLK L+ QVQMM+ +P MM P G+QQ + +
Sbjct: 292 RCNKSDKASMLDEAIEYLKSLQLQVQMMSMGYGMVP---MMFP-GIQQYMPPMGMGIGMG 347
Query: 138 GVGLGTG---------MGMLDMNTMAAAAATARTAPQSLPPPIYSPAASVTLPD 182
ML +T+ AA A P+ PP + P V PD
Sbjct: 348 MGMEMGMGMNRPVMPFTNMLASSTLPAATAAVHLGPRFPMPPFHMP--HVAAPD 399
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 21/151 (13%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGR-------SHSSKRRRTAAVHNQSERRRRD 63
+S + K + +A+ DED + + G + S+KR RTA VHN SERRRRD
Sbjct: 224 RSHQLKRSSHQAAAEWSLSQDDEDLDDEAGGLRRSAAGARSTKRGRTAEVHNMSERRRRD 283
Query: 64 RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP--L 121
RIN+KM+ALQ+L+PN +K DKASML+E I+YLK L+ QVQMM+++ + +P L
Sbjct: 284 RINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSSMGPAAAAAGLCVPPML 343
Query: 122 GMQ------------QQLQMSLLARMGMGVG 140
MQ L MG G+G
Sbjct: 344 AMQMAPMGMGMGMGMAHFHHHHLGAMGFGMG 374
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 83/130 (63%), Gaps = 13/130 (10%)
Query: 2 MTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGR-------SHSSKRRRTAAVH 54
M S E +++LK K E S G SE+ +E E+ G+ SKR R A VH
Sbjct: 414 MERVSDEPMQNLKRKHR-ETEESEGPSEDVEE--ESVGGKKAAPARGGTGSKRSRAAEVH 470
Query: 55 NQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMP 113
N SERRRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M+ MP
Sbjct: 471 NLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMP 530
Query: 114 QMNMMMPLGM 123
+MM+P G+
Sbjct: 531 --SMMLPPGV 538
>gi|168039475|ref|XP_001772223.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676554|gb|EDQ63036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 64/77 (83%), Gaps = 3/77 (3%)
Query: 31 QDEDHETK---TGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
+DE +TK TGR ++KR R A VHNQSERRRRDRIN+KM+ALQ+L+PN++KTDKASM
Sbjct: 2 EDESIDTKKPVTGRGSTAKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNKTDKASM 61
Query: 88 LDEVIDYLKQLKAQVQM 104
L+E I+YLK L+ Q+Q+
Sbjct: 62 LEEAIEYLKMLQLQLQV 78
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SEN DE+ E +S S+K++R VH+ SER+RRD+IN+KM+ALQ L+PN+ K DKASM
Sbjct: 361 SENADEEEEIP--KSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASM 418
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGL 141
LD+ I+YLK L+ Q+QMM ++R + MM+P + QQ+Q L+ +G+
Sbjct: 419 LDKAIEYLKTLQLQLQMM-SMRGSCYMPPMMIPTAL-QQIQAPYLSHFSPMMGM 470
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 7/106 (6%)
Query: 5 ASYESLKSLKTKTTD-EDSASHGRSENQDED----HETKTGRSHSSKRRRTAAVHNQSER 59
AS + + K K D EDS H S++ +ED + R SKR R A VHN SER
Sbjct: 415 ASDDPPHNRKRKCHDTEDSEWH--SDDVEEDCNDVKRVTSARGAGSKRSRAAEVHNLSER 472
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
RRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+M
Sbjct: 473 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 518
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 201
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLG 142
+ +RN + + P+ + LQ + ++ M MG G
Sbjct: 202 L-TMRNGV----SLYPVCLPGVLQPNEISHMRMGYHEG 234
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 68/96 (70%), Gaps = 7/96 (7%)
Query: 14 KTKTTDEDSASHGRSENQDEDH-ETKTG---RSHSSKRRRTAAVHNQSERRRRDRINQKM 69
K + TDE S S++ +E++ K G R SKR R A VHN SERRRRDRIN+KM
Sbjct: 419 KFRETDE---SECHSDDVEEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKM 475
Query: 70 KALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM
Sbjct: 476 RALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Query: 31 QDEDHETKTGRSHS--------SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
+D + E+ GR + SKR R+A VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV 376
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGM 123
DKASMLDE I+YLK L+ QVQ+M+ +M P GM
Sbjct: 377 DKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 20 EDSASHGRSENQDEDHETKTG-RSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVP 77
EDS S + ETK+ R + SKRR R A VHN SERRRRDRIN+KM+ALQ+L+P
Sbjct: 289 EDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIP 348
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 349 HCNKTDKASILDEAIEYLKSLQMQVQIM 376
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 4/98 (4%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
+E + D + + S SSKR R A VHN SERRRRDRIN+KM+ALQ+L+P +K+DKASM
Sbjct: 346 AEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASM 405
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
LDE I+YLK L+ QVQMM+ + +P MM P G QQ
Sbjct: 406 LDEAIEYLKSLQLQVQMMSMGCSMVP---MMFP-GFQQ 439
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
Query: 28 SENQDEDHETKTG-------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
SE Q ED E + RS S++R R A VHN SERRRRDRIN+KM+ALQ+L+P+ +
Sbjct: 6 SECQSEDAELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCN 65
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMM 105
KTDKASMLDE I+YLK L+ Q+Q+M
Sbjct: 66 KTDKASMLDEAIEYLKSLQLQLQVM 90
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 20 EDSASHGRSENQDEDHETKTG-RSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVP 77
EDS S + ETK+ R + SKRR R A VHN SERRRRDRIN+KM+ALQ+L+P
Sbjct: 305 EDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIP 364
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 365 HCNKTDKASILDEAIEYLKSLQMQVQIM 392
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 20 EDSASHGRSENQDEDHETKTG-RSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVP 77
EDS S + ETK+ R + SKRR R A VHN SERRRRDRIN+KM+ALQ+L+P
Sbjct: 189 EDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIP 248
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 249 HCNKTDKASILDEAIEYLKSLQMQVQIM 276
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 20 EDSASHGRSENQDEDHETKTG-RSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVP 77
EDS S + ETK+ R + SKRR R A VHN SERRRRDRIN+KM+ALQ+L+P
Sbjct: 200 EDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIP 259
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 260 HCNKTDKASILDEAIEYLKSLQMQVQIM 287
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 81/127 (63%), Gaps = 14/127 (11%)
Query: 11 KSLKTKTTDEDSASHGR------SENQDEDHETKTGR----SHSSKRRRTAAVHNQSERR 60
+ ++ +ED GR +++D D E++ + S S+KR R A VHN SERR
Sbjct: 260 EPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQVCGSTSTKRSRAAEVHNLSERR 319
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
RRDRIN+KMKALQ+L+P +K+DKASMLDE I YLK L+ QVQMM+ +P +M P
Sbjct: 320 RRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCGMVP---VMFP 376
Query: 121 LGMQQQL 127
G+QQ +
Sbjct: 377 -GIQQYM 382
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASML+E I+YLK L+ QVQ
Sbjct: 330 SSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 389
Query: 104 MMN 106
MM+
Sbjct: 390 MMS 392
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 66/101 (65%), Gaps = 8/101 (7%)
Query: 31 QDEDHETKTGRSHS--------SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
+D + E+ GR + SKR R A VHN SERRRRDRIN+KM+ALQ+L+PN +K
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKV 376
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGM 123
DKASMLDE I+YLK L+ QVQ+M+ +M P GM
Sbjct: 377 DKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 11/112 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE DE +K R + +R R A VHN SERRRRDRIN+K++ALQ+LVP+ +KTDKAS+
Sbjct: 206 SEVADETRPSK--RPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 263
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGV 139
LDE I+YLK L+ QVQ+M +P MM P G Q L+ MGMG+
Sbjct: 264 LDEAIEYLKSLQMQVQIMWMTTGIVP---MMFP-GTHQ-----LMPPMGMGL 306
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASML+E I+YLK L+ QVQ
Sbjct: 330 SSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 389
Query: 104 MMN 106
MM+
Sbjct: 390 MMS 392
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 109/215 (50%), Gaps = 49/215 (22%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE DE +K R + +R R A VHN SERRRRDRIN+K++ALQ+LVP+ +KTDKAS+
Sbjct: 385 SEVADETRPSK--RPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 442
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGM 147
LDE I+YLK L+ QVQ+M +P MM P G Q L+ MGMG
Sbjct: 443 LDEAIEYLKSLQMQVQIMWMTTGIVP---MMFP-GTHQ-----LMPPMGMG--------- 484
Query: 148 LDMNTMAAAAATARTAPQ----------SLP---PPIYSPAASV-TLPD----------P 183
+NT A A+ Q SLP P I SPA + ++PD P
Sbjct: 485 --LNTACMPGAQAQGLNQMQRTTYYMNNSLPNQMPQIPSPAMNAPSVPDDMQNDNRIRGP 542
Query: 184 YYAFLAQSMNVELYNKMAALF---RQQVKQNTIQQ 215
FL + + ++ LF Q +QN IQ+
Sbjct: 543 RNPFLHCNDTLTATAQVPGLFTYGSQIAEQNEIQE 577
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 9/113 (7%)
Query: 17 TTDEDSASHGRSENQDEDH---ETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
T+ ED G+ E D D+ TK R S S+KR R A VHN SERRRRDRIN+KMKAL
Sbjct: 266 TSLEDRKRKGK-ETDDSDYLCYSTKQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKAL 324
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
Q+L+P +K DKASMLDE I+YLK L+ QVQMM+ +P MM G QQ
Sbjct: 325 QELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVP----MMFPGAQQ 373
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASML 88
E + D + + S S+KR R A VHN SERRRRDRIN+KM+ALQ+L+P +K+DKASML
Sbjct: 340 EFESADAKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASML 399
Query: 89 DEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
DE I+YLK L+ QVQMM+ + +P MM P G+QQ
Sbjct: 400 DEAIEYLKSLQLQVQMMSMGCSMVP---MMFP-GIQQ 432
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S+KR A VHN SERRRRDRIN+KMKALQ+L+P +K+DKASMLDE I+YLK L+ Q
Sbjct: 269 STSTKRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQ 328
Query: 102 VQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGM-----------GMLDM 150
VQMM+ +P M+ P G+QQ + + ML
Sbjct: 329 VQMMSMGCGMVP---MIFP-GIQQYMPPMGMGIGMGMGMGMEMGMGMNRSVMPFPNMLAS 384
Query: 151 NTMAAAAATARTAPQSLPPPIYSPAASVTLPD 182
+T+ AA ATA P+ PP + P V PD
Sbjct: 385 STLPAATATAHLGPRFPMPPFHMP--HVATPD 414
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 11/112 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE DE +K R + +R R A VHN SERRRRDRIN+K++ALQ+LVP+ +KTDKAS+
Sbjct: 209 SEVADETRPSK--RPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 266
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGV 139
LDE I+YLK L+ QVQ+M +P MM P G Q L+ MGMG+
Sbjct: 267 LDEAIEYLKSLQMQVQIMWMTTGIVP---MMFP-GTHQ-----LMPPMGMGL 309
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASML+E I+YLK L+ QVQ
Sbjct: 209 SSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 268
Query: 104 MMN 106
MM+
Sbjct: 269 MMS 271
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 11/112 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE DE +K R + +R R A VHN SERRRRDRIN+K++ALQ+LVP+ +KTDKAS+
Sbjct: 309 SEVADETRPSK--RPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 366
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGV 139
LDE I+YLK L+ QVQ+M +P MM P G Q L+ MGMG+
Sbjct: 367 LDEAIEYLKSLQMQVQIMWMTTGIVP---MMFP-GTHQ-----LMPPMGMGL 409
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 74/112 (66%), Gaps = 11/112 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
SE DE +K R + +R R A VHN SERRRRDRIN+K++ALQ+LVP+ +KTDKAS+
Sbjct: 210 SEVADETRPSK--RPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASI 267
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGV 139
LDE I+YLK L+ QVQ+M +P MM P G Q L+ MGMG+
Sbjct: 268 LDEAIEYLKSLQMQVQIMWMTTGIVP---MMFP-GTHQ-----LMPPMGMGL 310
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 73/105 (69%), Gaps = 11/105 (10%)
Query: 28 SENQDEDHETKTGR-------SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
+E Q ED E ++ S ++KR R A VHN SERRRRDRIN+KMKALQ+L+P +
Sbjct: 280 AEYQSEDVEFESADAKKQVRGSATAKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCN 339
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
K+DKASMLDE I+YLK L+ QVQMM+ + +P MM P G+QQ
Sbjct: 340 KSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVP---MMYP-GVQQ 380
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 21 DSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
DS + G SE + G S SKR R A VHN SE+RRR +IN+KMKALQ L+PN++
Sbjct: 76 DSEAGGSSEPEAAAGARPRGGS-GSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSN 134
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
KTDKASMLDE I+YLKQL+ QVQM+ ++RN +
Sbjct: 135 KTDKASMLDEAIEYLKQLQLQVQML-SMRNGV 165
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 21 DSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
DS + G SE + G S SKR R A VHN SE+RRR +IN+KMKALQ L+PN++
Sbjct: 76 DSEAGGSSEPEAAAGARPRGGS-GSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSN 134
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
KTDKASMLDE I+YLKQL+ QVQM+ ++RN +
Sbjct: 135 KTDKASMLDEAIEYLKQLQLQVQML-SMRNGV 165
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 11/107 (10%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN 110
A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ +RN
Sbjct: 189 AEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TMRN 247
Query: 111 NMPQMNMMMPLGMQQQLQMSLLARMGMGVGLG------TGMGMLDMN 151
+ + P+ + LQ + L + G G G +G G L N
Sbjct: 248 GL----SLHPIYLPGALQPTQLPQTGAGFAEGNLLLSNSGTGTLPAN 290
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 16/122 (13%)
Query: 16 KTTDEDSASHGR-----SENQDEDHETKTGR-------SHSSKRRRTAAVHNQSERRRRD 63
K +D GR +E Q ED E ++ S ++KR R A VHN SERRRRD
Sbjct: 225 KAPADDRKRKGREGDDTAEYQSEDVEFESADAKKQVRGSATAKRSRAAEVHNLSERRRRD 284
Query: 64 RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGM 123
RIN+KMKALQ+L+P +K+DKASMLDE I+YLK L+ QVQMM+ + +P MM P G+
Sbjct: 285 RINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCSMVP---MMYP-GV 340
Query: 124 QQ 125
QQ
Sbjct: 341 QQ 342
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 55/63 (87%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR RTA VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASML+E I+YLK L+ QVQ
Sbjct: 114 SSKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQ 173
Query: 104 MMN 106
MM+
Sbjct: 174 MMS 176
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SE+RRR +IN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQM 81
Query: 105 MNNVRNNM 112
+ ++RN +
Sbjct: 82 L-SMRNGV 88
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+++R R A VHN SERRRRDRIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+ QVQ
Sbjct: 261 TARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQ 320
Query: 104 MMNNVRNNMPQMNMMMPLGMQQQL 127
MM + + M +M P GM Q L
Sbjct: 321 MM-WMGSGMAPPAVMFP-GMHQYL 342
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 38 KTGRSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
K R H KRR R A VHN SERRRRDRIN+KM+ALQ+L+P+ +KTDKAS+LDE I+YLK
Sbjct: 218 KPSRRHGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLK 277
Query: 97 QLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGL 141
L+ QVQ+M P MM P Q M+L GM G
Sbjct: 278 SLQMQVQIMWMTSGMAP---MMFPGAHQFMPPMAL----GMNSGC 315
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 19/125 (15%)
Query: 27 RSENQDEDHETKTGRSHSSKRRRTAA--------------VHNQSERRRRDRINQKMKAL 72
+EN D D E++ G ++ T A VHN SE+RRR RIN+KMKAL
Sbjct: 104 ENENDDYDCESEEGVEAPAEEVPTKAASSRSSSKRSRAAEVHNLSEKRRRGRINEKMKAL 163
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL 132
Q L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++RN + M P G+ Q LQ+S
Sbjct: 164 QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SMRNGLSLHPMCFPEGL-QPLQLS-- 219
Query: 133 ARMGM 137
+MGM
Sbjct: 220 -QMGM 223
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
++ ++KRRR A VHN SERRRRDRIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+
Sbjct: 306 KTATAKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQL 365
Query: 101 QVQMMNNVRNNMPQMN-MMMPLGMQQQLQ 128
Q+QMM ++ P G+ Q +Q
Sbjct: 366 QLQMMWMGGGMAAAAAPVVFPAGVHQYMQ 394
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 74/117 (63%), Gaps = 13/117 (11%)
Query: 17 TTDEDSASHGRSENQDED---HETKTGR-----SHSSKRRRTAAVHNQSERRRRDRINQK 68
T+ ED G+ E D D + T G S S+KR R A VHN SERRRRDRIN+K
Sbjct: 266 TSLEDRKRKGK-ETDDSDYLCYSTLKGSKQVRGSTSTKRSRAAEVHNLSERRRRDRINEK 324
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
MKALQ+L+P +K DKASMLDE I+YLK L+ QVQMM+ +P MM P G QQ
Sbjct: 325 MKALQELIPRCNKADKASMLDEAIEYLKTLQLQVQMMSMGCGMVP---MMFP-GAQQ 377
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 5/85 (5%)
Query: 53 VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++RN +
Sbjct: 148 VHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SMRNGL 206
Query: 113 PQMNMMMPLGMQQQLQMSLLARMGM 137
M P G+ Q LQ+S +MGM
Sbjct: 207 SLHPMCFPDGL-QPLQLS---QMGM 227
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 24/130 (18%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQK 68
K + TTDE + RSE ETK R + S+KR R A VHN SER+RRDRIN++
Sbjct: 182 KEREATTTDE---TESRSE------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINER 232
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-----------NVRNNMPQMNM 117
MKALQ+L+P +K+DKASMLDE I+Y+K L+ Q+QMM+ ++ MP M M
Sbjct: 233 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAM 292
Query: 118 MMPLGMQQQL 127
M GM Q +
Sbjct: 293 GM--GMNQPI 300
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 24/130 (18%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQK 68
K + TTDE + RSE ETK R + S+KR R A VHN SER+RRDRIN++
Sbjct: 182 KEREATTTDE---TESRSE------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINER 232
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-----------NVRNNMPQMNM 117
MKALQ+L+P +K+DKASMLDE I+Y+K L+ Q+QMM+ ++ MP M M
Sbjct: 233 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAM 292
Query: 118 MMPLGMQQQL 127
M GM Q +
Sbjct: 293 GM--GMNQPI 300
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 90/146 (61%), Gaps = 18/146 (12%)
Query: 22 SASHGRSENQ-DE-DHETKTG-------------RSHSSKRRRTAAVHNQSERRRRDRIN 66
S+S G SEN+ DE D E++ G SSKR R A VHN SE+RRR RIN
Sbjct: 102 SSSVGASENEADEYDCESEEGLEALVEEAAVKSGGRSSSKRSRAAEVHNLSEKRRRSRIN 161
Query: 67 QKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQ-Q 125
+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++RN M M +P Q
Sbjct: 162 EKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SMRNGMSLHPMCLPGASQFS 220
Query: 126 QLQMSLLARMGMGVGLGTGMGMLDMN 151
Q++M V L G+L+MN
Sbjct: 221 QIRMDFGGEENRPVHLNMS-GILNMN 245
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQK 68
K + TTDE + RSE ETK R + S+KR R A VHN SER+RRDRIN++
Sbjct: 253 KEREATTTDE---TESRSE------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINER 303
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
MKALQ+L+P +K+DKASMLDE I+Y+K L+ Q+QMM+
Sbjct: 304 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 11/98 (11%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQK 68
K + TTDE + RSE ETK R + S+KR R A VHN SER+RRDRIN++
Sbjct: 253 KEREATTTDE---TESRSE------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINER 303
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
MKALQ+L+P +K+DKASMLDE I+Y+K L+ Q+QMM+
Sbjct: 304 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
E + G SE++ T+ R KR R A VHN SE+RRR RIN+KMKALQ L+PN+
Sbjct: 7 ESEEALGSSESE---QPTRPARPRG-KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNS 62
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN--MPQMNM 117
SKTDKASMLD+ I+YLKQL+ QVQM+ ++RN +P +N+
Sbjct: 63 SKTDKASMLDDAIEYLKQLQLQVQML-SMRNGLYLPPVNL 101
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A HN SE+RRR +IN+K+KALQ L+PN++KTDKASMLDE I+YLKQL+ QVQ
Sbjct: 86 SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 145
Query: 104 MMNNVRN 110
M+ VRN
Sbjct: 146 ML-MVRN 151
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 54/62 (87%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+++R R A VHN SERRRRDRIN+KM+ALQ+L+P+ +KTDKASMLDE I+YLK L+ QVQ
Sbjct: 310 TARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKTLQMQVQ 369
Query: 104 MM 105
MM
Sbjct: 370 MM 371
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A VHN SERRRRDRIN+KMKALQ+L+PN++KTDKASMLDE I+YLK L+ Q+Q
Sbjct: 15 SSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 74
Query: 104 MMN 106
+++
Sbjct: 75 VLS 77
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 6/117 (5%)
Query: 53 VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ ++RN +
Sbjct: 115 VHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-SLRNGL 173
Query: 113 PQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDM-NTMAAAAATARTAPQSLP 168
+ P+ + L L+RM + G G L+M +T+ P +LP
Sbjct: 174 S----LHPMYFHEGLHSLPLSRMSTELSEGNGSNPLNMTSTLPHPQDNPLLYPSNLP 226
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 56/63 (88%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A VHN SERRRRDRIN+KMKALQ+L+PN++KTDKASMLDE I+YLK L+ Q+Q
Sbjct: 15 SSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQ 74
Query: 104 MMN 106
+++
Sbjct: 75 VLS 77
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 12/93 (12%)
Query: 25 HGRSENQ-DEDHETKT----------GRSHSSKRR-RTAAVHNQSERRRRDRINQKMKAL 72
H RS ++ DED + T R S+KRR R A VHN SERRRRDRIN+KM+AL
Sbjct: 212 HKRSRDEFDEDADLDTVDETPPSSRDRRPASNKRRTRAAEVHNMSERRRRDRINEKMRAL 271
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
Q+LVP+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 272 QELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 304
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 91/190 (47%), Gaps = 41/190 (21%)
Query: 4 WASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRT--AAVHNQSERRR 61
W S L DED+ + DE + R +S +RRT A VHN SERRR
Sbjct: 205 WNSNAPLHKRSRDEFDEDA----DLDTVDETPPSSRDRRPASNKRRTRAAEVHNMSERRR 260
Query: 62 RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM-----------NNVRN 110
RDRIN+KM+ALQ+LVP+ +KTDKAS+LDE I+YLK L+ QVQ+M
Sbjct: 261 RDRINEKMRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIMWMSTGMAPMMIPGAHQ 320
Query: 111 NMPQMNM------MMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
MP M M M P +Q QM + M L +N M P
Sbjct: 321 LMPPMTMGLNSARMPPPAVQFLSQMQRVPPHFMNNPL--------LNQM----------P 362
Query: 165 QSLPPPIYSP 174
Q LPPP +P
Sbjct: 363 QMLPPPTNAP 372
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 23 ASHGRSENQDEDHETKTGRSH----SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
A +++D D E+ + + S+KR R A VHN SERRRRDRIN+KMKALQ+L+P
Sbjct: 228 AEEWEYQSEDVDFESAEAKKNISGSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPR 287
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQ 103
++K+DKASMLDE IDYLK L+ QVQ
Sbjct: 288 SNKSDKASMLDEAIDYLKSLQLQVQ 312
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLKQL+ QVQM+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 106 NNVRNN--MPQMNM 117
++RN +P +N+
Sbjct: 111 -SMRNGLYLPPVNL 123
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 218
Query: 106 NNVRNNM 112
++RN +
Sbjct: 219 -SMRNGV 224
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 3/74 (4%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLKQL+ QVQM+
Sbjct: 51 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 110
Query: 106 NNVRNNM--PQMNM 117
++RN + P +N+
Sbjct: 111 -SMRNGLYVPPVNL 123
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 9/106 (8%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSS------KRRRTAAVHNQSERRRRDRINQKMKALQ 73
ED+ G S+ + E R+ KR R A VHN SE+RRR +IN+KMKALQ
Sbjct: 70 EDAGGLGDSDAGGSEPEPPPERTRGGSGGGGGKRSRAAEVHNLSEKRRRSKINEKMKALQ 129
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMM---NNVRNNMPQMN 116
L+PN++KTDKASMLDE I+YLKQL+ QVQM+ N V N P ++
Sbjct: 130 SLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPPYLS 175
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLKQL+ QVQM+
Sbjct: 43 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 102
Query: 106 NNVRNNM 112
++RN +
Sbjct: 103 -SMRNGL 108
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 49 RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ +
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TM 255
Query: 109 RNNMPQMNMMMPLGMQQQLQMS 130
RN + + +P LQ+S
Sbjct: 256 RNGINLHPLCLPGTTLHPLQLS 277
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Query: 28 SENQDEDHETKT--------GRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
SE+ ED E+++ + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 7 SESPSEDAESESLALDRKPPQKLTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 66
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMM 105
+KTDKASMLDE I+YLK L+ QVQMM
Sbjct: 67 NKTDKASMLDEAIEYLKTLQMQVQMM 92
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 23/140 (16%)
Query: 14 KTKTTDEDSASHGR-------SENQDE--DHETK-----TGRSHSSKRRRTAAVHNQSER 59
+T D+ SH R SE Q E +HE+ + RS S++R R A VHN SER
Sbjct: 289 RTYKQSTDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSER 348
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMM 119
RRRDRIN+KMKALQ+L+P+++K+DKASMLDE I+YLK L+ Q+Q+M P MM
Sbjct: 349 RRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAP---MMF 405
Query: 120 PLGMQQQLQMSLLARMGMGV 139
P G+Q +ARMGMG+
Sbjct: 406 P-GVQH-----YMARMGMGM 419
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 49 RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ +
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TM 255
Query: 109 RNNMPQMNMMMPLGMQQQLQMS 130
RN + + +P LQ+S
Sbjct: 256 RNGINLHPLCLPGTTLHPLQLS 277
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 23/140 (16%)
Query: 14 KTKTTDEDSASHGR-------SENQDE--DHETK-----TGRSHSSKRRRTAAVHNQSER 59
+T D+ SH R SE Q E +HE+ + RS S++R R A VHN SER
Sbjct: 289 RTYKQSTDTNSHKRKGREAEESECQSEAAEHESAARNKASQRSGSTRRSRAAEVHNLSER 348
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMM 119
RRRDRIN+KMKALQ+L+P+++K+DKASMLDE I+YLK L+ Q+Q+M P MM
Sbjct: 349 RRRDRINEKMKALQELIPHSNKSDKASMLDEAIEYLKSLQLQLQLMWMGGGVAP---MMF 405
Query: 120 PLGMQQQLQMSLLARMGMGV 139
P G+Q +ARMGMG+
Sbjct: 406 P-GVQH-----YMARMGMGM 419
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 29/167 (17%)
Query: 9 SLKSLKTKTTD--EDSASHGRSENQDEDHETKT-----GRSHSSKRRRTAAVHNQSERRR 61
S SLK K D E+ +++ + + DE + KT R +KR+R+ VH ER+R
Sbjct: 182 SCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKR 241
Query: 62 RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL 121
RD N+KM+ALQ L+PN K DKAS+LDE I Y++ L+ QVQMM ++ N + + M+P+
Sbjct: 242 RDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM-SMGNGLIRPPTMLPM 300
Query: 122 GMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP 168
G + MG+G+ +G AAAT + PQ LP
Sbjct: 301 GK--------YSPMGLGMHMG-------------AAATPTSIPQFLP 326
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SSKR R A HN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQ
Sbjct: 120 SSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 179
Query: 104 MM 105
+
Sbjct: 180 YL 181
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 29/167 (17%)
Query: 9 SLKSLKTKTTD--EDSASHGRSENQDEDHETKT-----GRSHSSKRRRTAAVHNQSERRR 61
S SLK K D E+ +++ + + DE + KT R +KR+R+ VH ER+R
Sbjct: 182 SCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKR 241
Query: 62 RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL 121
RD N+KM+ALQ L+PN K DKAS+LDE I Y++ L+ QVQMM ++ N + + M+P+
Sbjct: 242 RDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM-SMGNGLIRPPTMLPM 300
Query: 122 GMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP 168
G + MG+G+ +G AAAT + PQ LP
Sbjct: 301 GH--------YSPMGLGMHMG-------------AAATPTSIPQFLP 326
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
R+ ++KRRR A VHN SERRRRDRIN+KMKALQ+L+P+ +K DKASMLDE I+YLK L+
Sbjct: 243 RTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQL 302
Query: 101 QVQMM 105
Q+Q++
Sbjct: 303 QLQVV 307
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Query: 28 SENQDEDHETKTG--------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
SE+ ED E+++ + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 289 SESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 348
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMM 105
+KTDKASMLDE I+YLK L+ Q+QMM
Sbjct: 349 NKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Query: 28 SENQDEDHETKTG--------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
SE+ ED E+++ + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 289 SESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 348
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMM 105
+KTDKASMLDE I+YLK L+ Q+QMM
Sbjct: 349 NKTDKASMLDEAIEYLKSLQLQLQMM 374
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 29/167 (17%)
Query: 9 SLKSLKTKTTD-EDSASHGRSENQDEDHETKTGRSHS------SKRRRTAAVHNQSERRR 61
SL SLK K D E+ S S N D++ + + H+ +KR+R+ VH ER+R
Sbjct: 179 SLCSLKRKHGDIEEEESTYLSNNPDDESDDAKTQVHARIRKPVTKRKRSTEVHKLYERKR 238
Query: 62 RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL 121
RD N+KM+ALQ ++PN K DKAS+LDE + Y++ L+ QVQMM ++ N + + MM+P+
Sbjct: 239 RDEFNKKMRALQDILPNCYKDDKASLLDEAVKYMRTLQHQVQMM-SMGNGLIRPPMMLPM 297
Query: 122 GMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP 168
G MG+G+ +G AAAT + PQ LP
Sbjct: 298 GH--------YPPMGLGMHVG-------------AAATPTSVPQFLP 323
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
Query: 12 SLKTKTTDEDSASHGRSENQDEDHETKT-----GRSHSSKRRRTAAVHNQSERRRRDRIN 66
SLK+K + + + H ++E + G S SKR R+A H+ SE+RRRDRIN
Sbjct: 341 SLKSKCQESEESEHPSQSFEEEPRRAEGAMSTRGGSAGSKRNRSAEGHSLSEKRRRDRIN 400
Query: 67 QKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
+KM++LQ+L+PN K DK S+LDE IDYLK L+ QVQ+M ++ M +M+P +QQ
Sbjct: 401 KKMRSLQELIPNCKKVDKISILDEAIDYLKTLQLQVQVM-SMGAGMCMAPVMIPAVLQQ 458
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Query: 23 ASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
A G SE E++ KR R A VHN SE+RRR +IN+KMKALQ LVPN+SKT
Sbjct: 24 ADRGDSEEALGSSESEPAGRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSKT 83
Query: 83 DKASMLDEVIDYLKQLKAQVQMMNNVRNNM--PQMNMMMP 120
DKASMLD+ I+YLK L+ QVQM+ ++RN + P +N+ P
Sbjct: 84 DKASMLDDAIEYLKHLQLQVQML-SMRNGVYRPSVNLPGP 122
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 8/86 (9%)
Query: 28 SENQDEDHETKTG--------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
SE+ ED E+++ + +++R R A VHN SERRRRDRIN+KM+ALQ+L+P+
Sbjct: 270 SESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHC 329
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMM 105
+KTDKASMLDE I+YLK L+ Q+QMM
Sbjct: 330 NKTDKASMLDEAIEYLKSLQLQLQMM 355
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLK L+ QVQM+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 106 NNVRNNM 112
++RN +
Sbjct: 102 -SMRNGL 107
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 7/76 (9%)
Query: 28 SENQDEDHETKTG-------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
SE Q ED E K+ R+ S++R R A VHN SERRRRDRIN+KMKALQ+L+P++S
Sbjct: 40 SEEQSEDTELKSALGNKSSQRTGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSS 99
Query: 81 KTDKASMLDEVIDYLK 96
KTDKASML+E I+YLK
Sbjct: 100 KTDKASMLEEAIEYLK 115
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLK L+ QVQM+
Sbjct: 42 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 101
Query: 106 NNVRNNM 112
++RN +
Sbjct: 102 -SMRNGL 107
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLK L+ QVQM+
Sbjct: 44 KRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML 103
Query: 106 NNVRNNM 112
++RN +
Sbjct: 104 -SMRNGL 109
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 59/75 (78%), Gaps = 4/75 (5%)
Query: 49 RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+ +
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TM 234
Query: 109 RNNMPQMNMMMPLGM 123
RN +N+ PL +
Sbjct: 235 RNG---INLHHPLCL 246
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 52/60 (86%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLD+ I+YLKQL+ QVQM+
Sbjct: 29 KRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMI 88
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 70/105 (66%), Gaps = 15/105 (14%)
Query: 36 ETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVID 93
ETK R + S+KR R A VHN SER+RRDRIN++MKALQ+L+P +K+DKASMLDE I+
Sbjct: 278 ETKQARGSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIE 337
Query: 94 YLKQLKAQVQMMN-----------NVRNNMPQMNMMMPLGMQQQL 127
Y+K L+ Q+Q+M+ ++ MP M M M GM Q L
Sbjct: 338 YMKSLQLQIQVMSMGCGMMPMMYPGMQQYMPHMAMRM--GMNQPL 380
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 52/67 (77%)
Query: 37 TKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
K SSKR R A VHN SE+RRR RIN+KMKALQ L+PN+SKTDKASMLDE I+YLK
Sbjct: 126 VKPAPPRSSKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSKTDKASMLDEAIEYLK 185
Query: 97 QLKAQVQ 103
L+ QVQ
Sbjct: 186 LLQLQVQ 192
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+++R R+A HN SERRRRDRIN+K+KALQ+L+PN +KTDK SMLDE IDYLK L+ Q+Q
Sbjct: 14 TTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQ 73
Query: 104 MM 105
M+
Sbjct: 74 ML 75
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 61/72 (84%), Gaps = 5/72 (6%)
Query: 53 VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN- 111
VHN SE+RRR RIN+KMKALQ LVPN+SKTDKASMLD+ I+YLKQL+ QVQM+ ++RN
Sbjct: 69 VHNLSEKRRRCRINEKMKALQSLVPNSSKTDKASMLDDAIEYLKQLQLQVQML-SMRNGL 127
Query: 112 -MPQMNMMMPLG 122
+PQ+N +P+G
Sbjct: 128 YLPQVN--LPVG 137
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+++R R+A HN SERRRRDRIN+K+KALQ+L+PN +KTDK SMLDE IDYLK L+ Q+Q
Sbjct: 15 TTRRSRSADFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQ 74
Query: 104 MM 105
M+
Sbjct: 75 ML 76
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
ED + ++R R+A HN SERRRRD+IN+K+KALQ+L+PN +KTDK SMLDE I
Sbjct: 2 EDGSAPRRSTPPARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAI 61
Query: 93 DYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQ 125
DYLK L+ Q+QM+ + M+ ++PL +QQ
Sbjct: 62 DYLKSLQLQLQMLVMGKG----MSPVVPLELQQ 90
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R R+A HN SERRRRD+IN+K+KALQ+L+PN +KTDK SMLDE IDYLK L+ Q+QM
Sbjct: 14 TRRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNKTDKVSMLDEAIDYLKSLQLQLQM 73
Query: 105 MNNVRNNMPQMNMMMPLGMQQ 125
+ + M+ ++PL +QQ
Sbjct: 74 LVMGKG----MSPVVPLELQQ 90
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 40 GRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
G S SKR R+A H+ SE+RRRDRIN+KM++LQ+L+PN K DK S+LDE IDYLK L+
Sbjct: 5 GGSAGSKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKISILDEAIDYLKTLQ 64
Query: 100 AQVQMMNNVRNNMPQMNMMMPLGMQQ 125
QVQ+M ++ M +M+P +QQ
Sbjct: 65 LQVQVM-SMGAGMCMAPVMIPAVLQQ 89
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 18 TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVP 77
D + +G E+ + H K GR + KR R++ VHN SERRRRDRIN+KM+ALQ+LVP
Sbjct: 190 VDYQTEENGEGESTNRRHAGK-GRLMNKKRSRSSEVHNLSERRRRDRINEKMRALQELVP 248
Query: 78 NASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+K DKASML+EVI+YLK L+ QVQ M+
Sbjct: 249 CCNKQVDKASMLEEVIEYLKSLQMQVQAMS 278
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 79/119 (66%), Gaps = 16/119 (13%)
Query: 28 SENQDEDHETKTG-------RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNAS 80
SE Q ED E K+ R+ ++R R A VHN SERRRRDRIN+KMKALQ+L+P++S
Sbjct: 173 SEEQSEDTELKSALGNKSSQRAGLARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSS 232
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGV 139
KTDKASML+E I+YLK L+ Q+Q+M P +M P G+Q +++MGMG+
Sbjct: 233 KTDKASMLEEAIEYLKSLQLQLQLMWMGSGMAP---IMFP-GIQH-----YMSQMGMGM 282
>gi|3193326|gb|AAC19308.1| contains similarity to transcriptional activators such as Ra-like
and myc-like regulatory R proteins [Arabidopsis
thaliana]
gi|7267092|emb|CAB80763.1| putative transcriptional regulator [Arabidopsis thaliana]
Length = 329
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 104/164 (63%), Gaps = 21/164 (12%)
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMM 119
+RRD+INQ+MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQV MM+ R NMP M + M
Sbjct: 154 KRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS--RMNMPSMMLPM 211
Query: 120 PLGMQQQLQMSLLAR--MGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP----PIYS 173
+ QQQLQMSL++ G+G+LD+N+M AAA+A ++ P P+
Sbjct: 212 AMQQQQQLQMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNC 271
Query: 174 PAASVT----------LPDPYYAFLA---QSMNVELYNKMAALF 204
P+ + +PDP AFLA Q +E Y++MA L+
Sbjct: 272 PSWDASSNDSRFQSPLIPDPMSAFLACSTQPTTMEAYSRMATLY 315
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R R+A HN SERRRRDRIN+K++ALQ+L+PN +KTDK SMLDE IDYLK L+ Q+QM
Sbjct: 15 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 74
Query: 105 M 105
+
Sbjct: 75 L 75
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 52/59 (88%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
KR R A VHN SERRRRDRIN+KM+ALQ+L+PN++KTDKASMLDE I+YLK L+ Q+Q+
Sbjct: 14 KRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNKTDKASMLDEAIEYLKMLQLQLQV 72
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 52/61 (85%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R R+A HN SERRRRDRIN+K++ALQ+L+PN +KTDK SMLDE IDYLK L+ Q+QM
Sbjct: 16 TRRSRSADFHNFSERRRRDRINEKLRALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQM 75
Query: 105 M 105
+
Sbjct: 76 L 76
>gi|115483366|ref|NP_001065353.1| Os10g0556200 [Oryza sativa Japonica Group]
gi|14165335|gb|AAK55467.1|AC069300_22 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433458|gb|AAP54971.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113639885|dbj|BAF27190.1| Os10g0556200 [Oryza sativa Japonica Group]
Length = 191
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 36/177 (20%)
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
++ +RRDRINQKMK LQKLVPN+SKTDKASMLDEVIDYLKQL+AQVQ+M+ + + M M
Sbjct: 8 KNNHKRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPM 67
Query: 116 NMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP------- 168
QLQMS++A+M + G+ M++M A P LP
Sbjct: 68 G-----MAMPQLQMSVMAQMAQMAQI--GLSMMNMGQAGGYAPMHMHTPPFLPVSWDAAA 120
Query: 169 ----------PPIYSPAASVTLPDPYYAFLAQSM---------NVELYNKMAALFRQ 206
PP + AA+ D + AFLA +E YN+M A++++
Sbjct: 121 SSSSAAAADRPPQPTGAATS---DAFSAFLASQAAQQNAQQPNGMEAYNRMMAMYQK 174
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 54/61 (88%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SER+RRDRIN++MKALQ+L+PN++KTDKASMLDE I+YLK L+ Q+Q+
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 105 M 105
+
Sbjct: 64 V 64
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 54/61 (88%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
SKR R A VHN SER+RRDRIN++MKALQ+L+PN++KTDKASMLDE I+YLK L+ Q+Q+
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNKTDKASMLDEAIEYLKLLQHQLQV 63
Query: 105 M 105
+
Sbjct: 64 V 64
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 22 SASHGRSENQDEDHETKTGRS-----HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
S +G SE + + + RS +S KR A HN SE++RR +IN+KMKALQKL+
Sbjct: 61 SVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLI 120
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMM 105
PN++KTDKASMLDE I+YLKQL+ QVQ +
Sbjct: 121 PNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 22 SASHGRSENQDEDHETKTGRS-----HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
S +G SE + + + RS +S KR A HN SE++RR +IN+KMKALQKL+
Sbjct: 61 SVGYGVSETGQDKYAFEHKRSGAKQRNSLKRSIDAQFHNLSEKKRRSKINEKMKALQKLI 120
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMM 105
PN++KTDKASMLDE I+YLKQL+ QVQ +
Sbjct: 121 PNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 26 GRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKA 85
G SE + T+ G SKR R A VHN SE+RRR +IN+KMKALQ L+PN++KTDKA
Sbjct: 60 GGSEPEAPPERTRGGGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKA 119
Query: 86 SMLDEVIDYLKQLKAQVQMM---NNVRNNMPQMN 116
SMLDE I+YLKQL+ QVQM+ N V N P ++
Sbjct: 120 SMLDEAIEYLKQLQLQVQMLSMRNGVYLNPPYLS 153
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 22 SASHGRSENQDEDHETKTGRS-----HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
S +G SE + + + RS +S KR A HN SE++RR +IN+KMKALQKL+
Sbjct: 61 SVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLI 120
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMM 105
PN++KTDKASMLDE I+YLKQL+ QVQ +
Sbjct: 121 PNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Query: 40 GRSHSS-KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQL 98
GR +S KR A HN SE+RRR +IN+KMKALQKL+PN++KTDKASMLDE I+YLKQL
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQL 141
Query: 99 KAQVQ---MMNNVRNNMPQMNMMMP 120
+ QVQ +MN + N Q+ ++P
Sbjct: 142 QLQVQTLAVMNGLGLNPMQLPPVLP 166
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 50/59 (84%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
KR R A VHN SERRRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQ+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQV 59
>gi|297817562|ref|XP_002876664.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
gi|297322502|gb|EFH52923.1| hypothetical protein ARALYDRAFT_907786 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 27/149 (18%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR+R A +N ER++R +N+KM+ LQ L+PN+ + D SMLDE I+Y+K L+ QVQMM
Sbjct: 173 KRKRNAEAYNSPERKQRRDVNKKMRTLQDLLPNSHEDDNESMLDEAINYMKNLQLQVQMM 232
Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
+ N +MM+PLG+ QM L MGM +G LG G+
Sbjct: 233 -TMGNRFVTPSMMLPLGLHYS-QMDLAMGMGMQMGAQQFLPAHVLGAGLPGINDSADMLR 290
Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
G++ M A T +PQS+PP
Sbjct: 291 FLNHPGLMQMQNSAPFTPTEDCSPQSVPP 319
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 43 HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
+S KR A HN SE+RRR +IN+KMKALQKL+PN++KTDKASMLDE I+YLKQL+ QV
Sbjct: 83 NSLKRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQV 142
Query: 103 QMM 105
Q +
Sbjct: 143 QTL 145
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 8/72 (11%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK--------TDKASMLDEVID 93
S S+KR R A VHN SERRRRDRIN+KMKALQ+L+P +K TDKASMLDE I+
Sbjct: 51 STSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIE 110
Query: 94 YLKQLKAQVQMM 105
YLK L+ QVQ+
Sbjct: 111 YLKTLQLQVQIF 122
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
+T TDE R E E+ T+ R S SSKR R A +H SERRRR +IN+ MKAL
Sbjct: 242 ETDITDE-RKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL 300
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL 132
Q+L+P +KTD++SMLD+VI+Y+K L++Q+QM + +P MM G QQ M +
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPP---MMYAGNIQQQYMPHM 357
Query: 133 ARMGM 137
A MGM
Sbjct: 358 A-MGM 361
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 103/176 (58%), Gaps = 17/176 (9%)
Query: 5 ASYESLKSLKTKTTD-EDSASHGRSENQDED---HETKTGRSHS-SKRRRTAAVHNQSER 59
+S ++ ++LK K D EDS H + +DE T GR + SK+ R+ VHN SER
Sbjct: 381 SSDDANQNLKRKNLDSEDSEWHSE-DFEDESIGVKRTDHGRGVTGSKKNRSTEVHNLSER 439
Query: 60 RRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMM 119
RRRDRIN++M+ALQ+L+PN +K DKASMLDE I+YLK L+ Q+Q+M+ + M M +
Sbjct: 440 RRRDRINERMRALQELIPNCNKADKASMLDEAIEYLKSLQLQLQIMSMGGGGL-YMPMTL 498
Query: 120 PLGMQQQLQ--------MSLLARMGMGV--GLGTGMGMLDMNTMAAAAATARTAPQ 165
P GMQ MS+ +MG+GV GT + + + +AA R PQ
Sbjct: 499 PAGMQHMHAAHMFPFSPMSVAMQMGLGVPQFQGTHLPVAHTSGLAALHGMVRPNPQ 554
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 11/114 (9%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQ--KLVPNASKTDKASMLDEVIDYLKQLKAQ 101
+++R R A VHN SERRRRDRIN+KM+ALQ +L+P+ +KTDKASMLDE I+YLK L+ Q
Sbjct: 161 TARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNKTDKASMLDEAIEYLKSLQLQ 220
Query: 102 VQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAA 155
+++M P +M P G+ Q L RMG+ +G M M MAA
Sbjct: 221 LRVMWMGSGMAPP--LMFP-GVHQ-----YLPRMGVRIG-AXAAAMPRMPFMAA 265
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
Query: 40 GRSHSS-KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQL 98
GR +S KR A HN SE+RRR +IN+KMKALQKL+PN++KTDKASMLDE I+Y+KQL
Sbjct: 82 GRQRNSLKRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYMKQL 141
Query: 99 KAQVQMM 105
+ QVQ +
Sbjct: 142 QLQVQTL 148
>gi|115460586|ref|NP_001053893.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|38344324|emb|CAE02150.2| OSJNBa0058K23.6 [Oryza sativa Japonica Group]
gi|113565464|dbj|BAF15807.1| Os04g0618600 [Oryza sativa Japonica Group]
gi|218195592|gb|EEC78019.1| hypothetical protein OsI_17435 [Oryza sativa Indica Group]
gi|222629570|gb|EEE61702.1| hypothetical protein OsJ_16185 [Oryza sativa Japonica Group]
Length = 181
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 47/55 (85%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
A HN SERRRRDRIN+K+KALQ+L+PN +KTDK SMLDE IDYLK L+ Q+QM+
Sbjct: 15 AEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 8/105 (7%)
Query: 23 ASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK 81
A+ + + ++E H T+ R S S KR RTA +HN +ERRRR++IN+KMK LQ+L+P +K
Sbjct: 228 ATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNK 287
Query: 82 TDKASMLDEVIDYLKQLKAQVQ-----MMN--NVRNNMPQMNMMM 119
+ K S LD+ I+Y+K L++Q+Q MMN N + MP M M M
Sbjct: 288 STKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQFMPHMAMDM 332
>gi|225898737|dbj|BAH30499.1| hypothetical protein [Arabidopsis thaliana]
Length = 363
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR+R A +N ER +R+ IN+KM+ LQ L+PN+ K D SMLDE I+Y+ L+ QVQMM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
+ N +MMMPLG QM L +GM +G LG G+
Sbjct: 245 -TMGNRFVTPSMMMPLGPNYS-QMGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADMLR 302
Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
G++ M A T +PQS+PP
Sbjct: 303 FLNHPGLMPMQNSAPFIPTENCSPQSVPP 331
>gi|145332927|ref|NP_001078329.1| transcription factor PIF6 [Arabidopsis thaliana]
gi|75301050|sp|Q8L5W7.1|PIF6_ARATH RecName: Full=Transcription factor PIF6; AltName: Full=Basic
helix-loop-helix protein 132; Short=AtbHLH132;
Short=bHLH 132; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 2; AltName: Full=Protein
PHYTOCHROME-INTERACTING FACTOR 6; AltName:
Full=Transcription factor EN 111; AltName: Full=bHLH
transcription factor bHLH132
gi|22535494|dbj|BAC10690.1| PIF3 like basic Helix Loop Helix protein 2 [Arabidopsis thaliana]
gi|332646786|gb|AEE80307.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 363
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR+R A +N ER +R+ IN+KM+ LQ L+PN+ K D SMLDE I+Y+ L+ QVQMM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244
Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
+ N +MMMPLG QM L +GM +G LG G+
Sbjct: 245 -TMGNRFVTPSMMMPLGPNYS-QMGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADMLR 302
Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
G++ M A T +PQS+PP
Sbjct: 303 FLNHPGLMPMQNSAPFIPTENCSPQSVPP 331
>gi|297821098|ref|XP_002878432.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
gi|297324270|gb|EFH54691.1| hypothetical protein ARALYDRAFT_907776 [Arabidopsis lyrata subsp.
lyrata]
Length = 347
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR+R A +N ER++R IN+KM+ LQ L+PN+ K D SMLDE I Y+K LK QVQMM
Sbjct: 152 KRKRNAEANNSPERKQRRDINKKMRTLQDLLPNSHKDDNESMLDEAIIYMKNLKLQVQMM 211
Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
+ N +MM+PLG+ QM L MGM + LG G+
Sbjct: 212 -TMGNRFVTPSMMLPLGLHYS-QMGLAMGMGMQMDAQQFLPAHVLGAGLPGINDSADMLR 269
Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
G++ M A T +PQS+PP
Sbjct: 270 FLSHPGLMPMQNSAPFTPTEDCSPQSVPP 298
>gi|42566136|ref|NP_191768.2| transcription factor PIF6 [Arabidopsis thaliana]
gi|193211499|gb|ACF16169.1| At3g62090 [Arabidopsis thaliana]
gi|332646785|gb|AEE80306.1| transcription factor PIF6 [Arabidopsis thaliana]
Length = 346
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR+R A +N ER +R+ IN+KM+ LQ L+PN+ K D SMLDE I+Y+ L+ QVQMM
Sbjct: 168 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 227
Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
+ N +MMMPLG QM L +GM +G LG G+
Sbjct: 228 -TMGNRFVTPSMMMPLGPNYS-QMGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADMLR 285
Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
G++ M A T +PQS+PP
Sbjct: 286 FLNHPGLMPMQNSAPFIPTENCSPQSVPP 314
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 53 VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
HN SERRRRDRIN+K+KALQ+L+PN +KTDK SMLDE IDYLK L+ Q+QM+
Sbjct: 21 FHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQIQLQML 73
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
A HN SE+RRR +IN+KMKALQKL+PN++KTDKASMLDE I+YLKQL+ QVQ +
Sbjct: 106 AKFHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQAL 160
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQSERRRRDRINQKMKALQK 74
T D S E Q+ + K R + +R R A VHN SER+RRD+IN+K++AL++
Sbjct: 174 TDDSPYLSDNDEETQENIVKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKE 233
Query: 75 LVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
L+PN +K DKASMLD+ IDYLK LK Q+Q+M
Sbjct: 234 LIPNCNKMDKASMLDDAIDYLKTLKLQLQIM 264
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQSERRRRDRINQKMKALQK 74
T D S E Q+ + K R + +R R A VHN SER+RRD+IN+K++AL++
Sbjct: 174 TDDSPYLSDNDEETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKIRALKE 233
Query: 75 LVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
L+PN +K DKASMLD+ IDYLK LK Q+Q+M
Sbjct: 234 LIPNCNKMDKASMLDDAIDYLKTLKLQLQIM 264
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
+T TDE R E E+ T+ R S SSKR R A +H SERRRR +IN+ MKAL
Sbjct: 242 ETDITDE-RKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL 300
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
Q+L+P +KTD++SMLD+VI+Y+K L++Q+Q
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>gi|223702404|gb|ACN21633.1| putative basic helix-loop-helix protein BHLH9 [Lotus japonicus]
Length = 165
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 18/108 (16%)
Query: 22 SASHGRSENQ-DE-DHETKTGRSHSSKRRRT---------------AAVHNQSERRRRDR 64
S+S G SEN+ DE D E++ G + RT A V N S +RRR R
Sbjct: 31 SSSLGISENEADEYDCESEEGIEALGEEVRTKSVPSSRSSSKRTRAAEVLNLSGKRRRSR 90
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
IN+ MKALQ L+PN++KTDKA MLDE IDYLKQL+ QVQM+ ++RN +
Sbjct: 91 INENMKALQNLIPNSNKTDKAFMLDEAIDYLKQLQLQVQML-SLRNGL 137
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
KR R A VHN ER+RRD+IN++M+ L++L+PN +KTDKASMLD+ I+YLK LK Q+Q+
Sbjct: 748 KRSRNAQVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQIQV 806
>gi|449463597|ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
Length = 550
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 9/101 (8%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS SS+R R A VHN SERRRR+RIN+KMKALQ+L+P+ +KTDKASMLDE I+YLK L+
Sbjct: 343 RSGSSRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQL 402
Query: 101 QVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGL 141
Q+Q+M P MM P G+Q ++R+ MG+G+
Sbjct: 403 QLQVMWMGSGMAP---MMFP-GVQH-----YMSRVAMGMGM 434
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 14/114 (12%)
Query: 20 EDSASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
ED R E E T+ R S S KR R A +HN +ERRRR++IN+KMK LQ+L+P
Sbjct: 1112 EDRKQKEREETIVEIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPR 1171
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMN-------------NVRNNMPQMNMMM 119
+K+ K S L++VI+Y+K L+ Q+QMM+ N++ MP M M M
Sbjct: 1172 CNKSTKVSTLEDVIEYMKSLQMQIQMMSMGHGMMPPMMNAENMQQFMPHMAMGM 1225
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 55/74 (74%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S KR RTA +HN +ERRRR++IN+ +K LQ+L+P +K+ K S LD+ I+Y+K L++Q
Sbjct: 577 SMSRKRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVSTLDDAIEYVKWLQSQ 636
Query: 102 VQMMNNVRNNMPQM 115
+QMM+ + MP M
Sbjct: 637 IQMMSTGQGMMPPM 650
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 14/95 (14%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S KR R A +HN +ERRRR++IN+KMK LQ+L+P +K+ K S LD I+Y+K L++Q
Sbjct: 131 STSRKRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLDAAIEYVKWLQSQ 190
Query: 102 VQMM-------------NNVRNNMPQMNMMMPLGM 123
+QM+ N++ MP M M M +GM
Sbjct: 191 IQMILMGQGMMPSMMNEENMQEFMPHMAMKM-MGM 224
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 11 KSLKTKTTDEDSASHGRSENQDED-----HETKTGR-SHSSKRRRTAAVHNQSERRRRDR 64
+ ++ + E + GR + E+ T+ R S S KR R A +HN +ERRRR++
Sbjct: 1528 EPVRIQPATETDIADGRERKEREETIAGIQGTEEARGSTSRKRSRAAEMHNLAERRRREK 1587
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
IN+KMK LQ+L+P +K+ K S L++VI+Y+K L+ Q+Q
Sbjct: 1588 INEKMKTLQELIPRCNKSTKVSTLEDVIEYVKSLEMQIQ 1626
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
+R R VHN SE++RR++IN+KM+ L++L+PN +K DKASMLD+ IDYLK LK Q+Q+M
Sbjct: 323 RRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQIM 382
>gi|90399331|emb|CAJ86131.1| H0313F03.15 [Oryza sativa Indica Group]
Length = 307
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E E + + + R+ H S +RRRDRIN+K+KALQ+L+PN +KTDK SMLDE I
Sbjct: 123 EGKEAASQEEEQTPKLRSVIAHLVSRKRRRDRINEKLKALQELLPNCTKTDKVSMLDEAI 182
Query: 93 DYLKQLKAQVQMM 105
DYLK L+ Q+QM+
Sbjct: 183 DYLKSLQLQLQML 195
>gi|297820750|ref|XP_002878258.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
gi|297324096|gb|EFH54517.1| phytochrome-interacting factor 5 [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 246 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQM 305
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 306 QLQVM 310
>gi|297824267|ref|XP_002880016.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
gi|297325855|gb|EFH56275.1| hypothetical protein ARALYDRAFT_483401 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 248 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 307
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 308 QLQVM 312
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 24/183 (13%)
Query: 5 ASYESLKSLKTKTTD-EDSASHGRSENQDED---HETKTGRSHS-SKRRRTAAVHNQSER 59
+S ++ ++LK K D EDS H + +DE T GR + SK+ R+ VHN SER
Sbjct: 381 SSDDANQNLKRKNLDSEDSEWHSE-DFEDESIGVKRTDHGRGVTGSKKNRSTEVHNLSER 439
Query: 60 RRRDRINQKMKALQKLVPNASKT-------DKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
RRRDRIN++M+ALQ+L+PN +K DKASMLDE I+YLK L+ Q+Q+M+ +
Sbjct: 440 RRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKSLQLQLQIMSMGGGGL 499
Query: 113 PQMNMMMPLGMQQQLQ--------MSLLARMGMGV--GLGTGMGMLDMNTMAAAAATART 162
M M +P GMQ MS+ +MG+GV GT + + + +AA R
Sbjct: 500 -YMPMTLPAGMQHMHAAHMFPFSPMSVAMQMGLGVPQFQGTHLPVAHTSGLAALHGMVRP 558
Query: 163 APQ 165
PQ
Sbjct: 559 NPQ 561
>gi|30689224|ref|NP_850381.1| transcription factor PIF4 [Arabidopsis thaliana]
gi|330255104|gb|AEC10198.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 428
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 249 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 308
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 309 QLQVM 313
>gi|312283297|dbj|BAJ34514.1| unnamed protein product [Thellungiella halophila]
Length = 448
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 252 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQM 311
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 312 QLQVM 316
>gi|30689218|ref|NP_565991.2| transcription factor PIF4 [Arabidopsis thaliana]
gi|28201855|sp|Q8W2F3.1|PIF4_ARATH RecName: Full=Transcription factor PIF4; AltName: Full=Basic
helix-loop-helix protein 9; Short=AtbHLH9; Short=bHLH 9;
AltName: Full=Phytochrome-interacting factor 4; AltName:
Full=Short under red-light 2; AltName:
Full=Transcription factor EN 102; AltName: Full=bHLH
transcription factor bHLH009
gi|18026966|gb|AAL55716.1|AF251694_1 putative transcription factor BHLH9 [Arabidopsis thaliana]
gi|21068661|emb|CAD29449.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|222423257|dbj|BAH19605.1| AT2G43010 [Arabidopsis thaliana]
gi|225898591|dbj|BAH30426.1| hypothetical protein [Arabidopsis thaliana]
gi|291506714|gb|ADE08789.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506716|gb|ADE08790.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506718|gb|ADE08791.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506720|gb|ADE08792.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506722|gb|ADE08793.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506724|gb|ADE08794.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506726|gb|ADE08795.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506728|gb|ADE08796.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|330255103|gb|AEC10197.1| transcription factor PIF4 [Arabidopsis thaliana]
Length = 430
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 249 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 308
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 309 QLQVM 313
>gi|291506702|gb|ADE08783.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506704|gb|ADE08784.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506706|gb|ADE08785.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506708|gb|ADE08786.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506710|gb|ADE08787.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|291506712|gb|ADE08788.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 430
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 249 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 308
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 309 QLQVM 313
>gi|222424750|dbj|BAH20328.1| AT2G43010 [Arabidopsis thaliana]
Length = 409
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+
Sbjct: 228 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 287
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 288 QLQVM 292
>gi|30694919|ref|NP_851021.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|7529749|emb|CAB86934.1| putative protein [Arabidopsis thaliana]
gi|332646347|gb|AEE79868.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 442
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ S+TDKAS+LDE IDYLK L+
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQM 307
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 308 QLQVM 312
>gi|30694924|ref|NP_191465.3| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315658|ref|NP_001030889.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|79315685|ref|NP_001030890.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|75297820|sp|Q84LH8.1|PIF5_ARATH RecName: Full=Transcription factor PIF5; AltName: Full=Basic
helix-loop-helix protein 65; Short=AtbHLH65; Short=bHLH
65; AltName: Full=Phytochrome interacting factor-like 6;
AltName: Full=Phytochrome-interacting factor 5; AltName:
Full=Transcription factor EN 103; AltName: Full=bHLH
transcription factor bHLH065
gi|28372349|dbj|BAC56978.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|222424174|dbj|BAH20046.1| AT3G59060 [Arabidopsis thaliana]
gi|225898729|dbj|BAH30495.1| hypothetical protein [Arabidopsis thaliana]
gi|332646348|gb|AEE79869.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646349|gb|AEE79870.1| transcription factor PIF5 [Arabidopsis thaliana]
gi|332646350|gb|AEE79871.1| transcription factor PIF5 [Arabidopsis thaliana]
Length = 444
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ S+TDKAS+LDE IDYLK L+
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQM 307
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 308 QLQVM 312
>gi|20127070|gb|AAM10954.1|AF488598_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 442
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 56/65 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ S+TDKAS+LDE IDYLK L+
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQM 307
Query: 101 QVQMM 105
Q+Q+M
Sbjct: 308 QLQVM 312
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
KR R VHN SE++RR++IN+KM+ L+ L+PN +K DKASMLD+ IDYLK LK Q+Q
Sbjct: 333 KRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKVDKASMLDDAIDYLKTLKLQLQ 390
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
+KR + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 190 AKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 249
Query: 105 MNNVR 109
++ R
Sbjct: 250 LSMSR 254
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ RR A H S ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV+
Sbjct: 261 RARRGQATHPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 320
Query: 104 MMNNVR 109
+++ R
Sbjct: 321 VLSMSR 326
>gi|294462676|gb|ADE76883.1| unknown [Picea sitchensis]
Length = 244
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 9/102 (8%)
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQ--QQ 126
M+ALQ+L+P+ +K+DKASMLDE I+YLK L+ QVQ+M+ ++ P GMQ Q
Sbjct: 1 MRALQELIPHCNKSDKASMLDEAIEYLKTLQLQVQIMSMGGGMG-MPPLVFPGGMQHFQV 59
Query: 127 LQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP 168
QM+ L+ MGMG+G+G MGMLDM AAT+ SLP
Sbjct: 60 PQMAHLSPMGMGIGMGYSMGMLDM------AATSGRPVMSLP 95
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
+KR + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 197 AKRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 256
Query: 105 MNNVR 109
++ R
Sbjct: 257 LSMSR 261
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 219 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 278
Query: 105 MNNVR 109
++ R
Sbjct: 279 LSVSR 283
>gi|145712853|gb|ABP96466.1| phytochrome interacting factor 4 [Arabidopsis lyrata subsp.
petraea]
Length = 250
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQL 98
RS S++R R A VHN SERRR DRIN++MKALQ+L+P+ SKTDKAS+LD IDY+K L
Sbjct: 194 RSGSNRRSRAAEVHNLSERRR-DRINERMKALQELIPHCSKTDKASILDGAIDYMKSL 250
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 198 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKV 257
Query: 105 MNNVR 109
++ R
Sbjct: 258 LSMSR 262
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 201 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKV 260
Query: 105 MNNVR 109
++ R
Sbjct: 261 LSMSR 265
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 106 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 165
Query: 105 MNNVR 109
++ R
Sbjct: 166 LSMSR 170
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 51/61 (83%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 255 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 314
Query: 105 M 105
+
Sbjct: 315 L 315
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 206 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265
Query: 105 MNNVR 109
++ R
Sbjct: 266 LSMSR 270
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 249 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 308
Query: 105 MNNVR 109
++ R
Sbjct: 309 LSMSR 313
>gi|226492870|ref|NP_001146411.1| uncharacterized protein LOC100279991 [Zea mays]
gi|219887061|gb|ACL53905.1| unknown [Zea mays]
Length = 254
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 43/48 (89%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
+RRRDRIN+KM+ALQ+L+PN +K DKASMLDE I+YLK L+ QVQMM+
Sbjct: 10 QRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMS 57
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 258 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 317
Query: 105 MNNVR 109
++ R
Sbjct: 318 LSMSR 322
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 39 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 98
Query: 105 MNNVR 109
++ R
Sbjct: 99 LSMSR 103
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 105 MNNVR 109
++ R
Sbjct: 200 LSMSR 204
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 51/61 (83%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 227 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 286
Query: 105 M 105
+
Sbjct: 287 L 287
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE++DY+K L+ QV++
Sbjct: 242 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKV 301
Query: 105 MNNVR 109
++ R
Sbjct: 302 LSMSR 306
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE++DY+K L+ QV++
Sbjct: 241 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIVDYVKFLQLQVKV 300
Query: 105 MNNVR 109
++ R
Sbjct: 301 LSMSR 305
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 105 MNNVR 109
++ R
Sbjct: 200 LSMSR 204
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 185 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 244
Query: 105 MNNVR 109
++ R
Sbjct: 245 LSMSR 249
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 206 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265
Query: 105 MNNVR 109
++ R
Sbjct: 266 LSMSR 270
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 206 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 265
Query: 105 MNNVR 109
++ R
Sbjct: 266 LSMSR 270
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 176 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 235
Query: 105 MNNVR 109
++ R
Sbjct: 236 LSMSR 240
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199
Query: 105 MNNVR 109
++ R
Sbjct: 200 LSMSR 204
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRR--RTAAV--HNQSERRRRDRINQKMKALQKLVP 77
AS G S+ Q + H + R R A H+ +ER RR+RI ++MKALQ+LVP
Sbjct: 214 GASGGVSQPQAREAGGGAAAQHRQRERAWRGQATDPHSIAERLRRERIAERMKALQELVP 273
Query: 78 NASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
NA+KTDKASMLDE+IDY+K L+ QV M+ +
Sbjct: 274 NANKTDKASMLDEIIDYVKFLQLQVLSMSRL 304
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 51/61 (83%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 199 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 258
Query: 105 M 105
+
Sbjct: 259 L 259
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MKALQ+LVPN++KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 43 HSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 98
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+A+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 146 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQVQVKV 205
Query: 105 MNNVR 109
++ R
Sbjct: 206 LSMSR 210
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPN++KTDKASMLDE+IDY+K L+ QV++
Sbjct: 33 ARRGQATDPHSIAERLRRERIAERMKALQELVPNSNKTDKASMLDEIIDYVKFLQLQVKV 92
Query: 105 MNNVR 109
++ R
Sbjct: 93 LSMSR 97
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 224 HSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 279
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++
Sbjct: 138 ARRGQATDPHSIAERLRREKIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKV 197
Query: 105 MNNVR 109
++ R
Sbjct: 198 LSMSR 202
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
+KR + H+ +ER RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY++ L+ QV++
Sbjct: 196 AKRGQATDPHSIAERLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVRFLQLQVKV 255
Query: 105 MNNVR 109
++ R
Sbjct: 256 LSMSR 260
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 49/56 (87%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MKALQ+LVP+A+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 175 HSIAERLRRERIAERMKALQELVPSANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 230
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPN +KTDKASMLDE+IDY++ L+ QV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVEFLQLQVKV 199
Query: 105 MNNVR 109
++ R
Sbjct: 200 LSMSR 204
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 191
Query: 105 MNNVR 109
++ R
Sbjct: 192 LSMSR 196
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 191
Query: 105 MNNVR 109
++ R
Sbjct: 192 LSMSR 196
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV
Sbjct: 252 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVLS 311
Query: 105 MNNV 108
M+ +
Sbjct: 312 MSRL 315
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 130 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 189
Query: 105 MNNVR 109
++ R
Sbjct: 190 LSMSR 194
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 49/59 (83%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV+
Sbjct: 161 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVK 219
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 48/56 (85%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MKALQ LVPNA+KTDKASMLDE++DY+K L+ QV++++ R
Sbjct: 15 HSIAERLRRERIAERMKALQDLVPNANKTDKASMLDEIVDYVKFLQLQVKVLSMSR 70
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 189 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 248
Query: 105 MNNVR 109
++ R
Sbjct: 249 LSMSR 253
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 7/108 (6%)
Query: 45 SKRRRTAAV--HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
S+ RR A H+ +ER RR++I+++MK LQ+LVPN++K DK+SMLDE+IDY+K L+ QV
Sbjct: 321 SRARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKADKSSMLDEIIDYVKFLQLQV 380
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDM 150
++++ R P ++PL + Q + + + G T G+LD+
Sbjct: 381 KVLSMSRLGAP--GAVLPLLRESQTEGHSNSSLS---GTTTSQGLLDV 423
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S KR R A +HN +ERRRR++IN++MK LQ+L+P +K+ K SML++VI+Y+K L+ Q
Sbjct: 143 STSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQ 202
Query: 102 VQMMNNVRNNMPQMNMMM 119
+ MP M M M
Sbjct: 203 INQF------MPHMAMGM 214
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MK+LQ+LVPN++KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 325
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 49/56 (87%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MK+LQ+LVPN++KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 270 HSIAERLRRERIAERMKSLQELVPNSNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 325
>gi|145712876|gb|ABP96467.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712884|gb|ABP96471.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712888|gb|ABP96473.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712890|gb|ABP96474.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712894|gb|ABP96476.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712896|gb|ABP96477.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712900|gb|ABP96479.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712902|gb|ABP96480.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQL 98
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L
Sbjct: 194 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|145712878|gb|ABP96468.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712880|gb|ABP96469.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712882|gb|ABP96470.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712886|gb|ABP96472.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712892|gb|ABP96475.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
gi|145712898|gb|ABP96478.1| phytochrome interacting factor 4 [Arabidopsis thaliana]
Length = 251
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 41 RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQL 98
RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L
Sbjct: 194 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSL 251
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 47/53 (88%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
H+ +ER RR+RI ++MKALQ+LVPNA+KTDKASMLDE+I Y+K L+ QV++++
Sbjct: 41 HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIGYVKFLQLQVKVLS 93
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 10/109 (9%)
Query: 28 SENQDEDHETKTGRSHSS------KRRRTAAV--HNQSERRRRDRINQKMKALQKLVPNA 79
S + D H+ +G +S+ + RR A H+ +ER RR++I+++MK LQ LVPN+
Sbjct: 297 SHSADVQHKANSGNGNSASAKPRARARRGQATDPHSIAERLRREKISERMKNLQDLVPNS 356
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQ 128
+K DK+SMLDE+IDY+K L+ QV++++ R P ++PL + Q +
Sbjct: 357 NKADKSSMLDEIIDYVKFLQLQVKVLSMSRLGAP--GAVLPLLAESQTE 403
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+A+KTD+A+MLDE++DY+K L+ QV++
Sbjct: 171 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKV 230
Query: 105 MNNVR 109
++ R
Sbjct: 231 LSMSR 235
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK+LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 382 LSMSRLGAP--GAVLPLLTESQTE 403
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 50/64 (78%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LV NA+KTDKASMLDE+IDY+K L+ QV
Sbjct: 147 ARRGQATDPHSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLS 206
Query: 105 MNNV 108
M+ +
Sbjct: 207 MSRL 210
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 7/106 (6%)
Query: 39 TGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
TG+ RR A H+ +ER RR++I ++MK LQ+LVPN+SK DKASMLDE+I+Y+K
Sbjct: 346 TGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKF 405
Query: 98 LKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQ----MSLLARMGMGV 139
L+ QV++++ R + ++PL Q + +SL G+G+
Sbjct: 406 LQLQVKVLSMSR--LGATGAVIPLITDGQAEGSNSLSLSTSAGLGI 449
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 46/55 (83%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
H+ +ER RR+RI ++MKALQ+LV NA+KTDKASMLDE+IDY+K L+ QV M+ +
Sbjct: 128 HSIAERLRRERIAERMKALQELVSNANKTDKASMLDEIIDYVKFLQLQVLSMSRL 182
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+A+KTD+A+MLDE++DY+K L+ QV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKV 160
Query: 105 MNNVR 109
++ R
Sbjct: 161 LSMSR 165
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 317 ARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 376
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 377 LSMSRLGAP--GAVLPLLRESQTE 398
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 118 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 177
Query: 105 MNNVR 109
++ R
Sbjct: 178 LSMSR 182
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+++KTD+A+MLDE++DY+K L+ QV++
Sbjct: 153 ARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKV 212
Query: 105 MNNVR 109
++ R
Sbjct: 213 LSMSR 217
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+++KTD+A+MLDE++DY+K L+ QV++
Sbjct: 177 ARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKV 236
Query: 105 MNNVR 109
++ R
Sbjct: 237 LSMSR 241
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 46/52 (88%)
Query: 58 ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
+R RR+RI ++MK+LQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 151 QRLRRERIAERMKSLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 202
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 117 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 176
Query: 105 MNNVR 109
++ R
Sbjct: 177 LSMSR 181
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 39 TGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
TG+ RR A H+ +ER RR++I ++MK LQ+LVPN++KTDKASMLDE+I+Y+K
Sbjct: 291 TGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKF 350
Query: 98 LKAQVQMMNNVR 109
L+ QV++++ R
Sbjct: 351 LQLQVKVLSMSR 362
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 382 LSMSRLGAP--GAVLPLLAESQTE 403
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 126 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 185
Query: 105 MNNVR 109
++ R
Sbjct: 186 LSMSR 190
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 318 ARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKV 377
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 378 LSMSRLGAP--GAVLPLLRESQTE 399
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 318 ARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKV 377
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 378 LSMSRLGAP--GAVLPLLRESQTE 399
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 381
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 382 LSMSRLGAP--GAVLPLLAESQTE 403
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 318 ARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKV 377
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 378 LSMSRLGAP--GAVLPLLRESQTE 399
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 241 ARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKV 300
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 301 LSMSRLGAP--GAVLPLLRESQTE 322
>gi|224063679|ref|XP_002301261.1| predicted protein [Populus trichocarpa]
gi|222842987|gb|EEE80534.1| predicted protein [Populus trichocarpa]
Length = 154
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 32/152 (21%)
Query: 87 MLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMG-------MGV 139
MLDEVI+YLKQL+AQVQM++ R NM MM+P+ +QQQLQMS++A + MG+
Sbjct: 1 MLDEVIEYLKQLQAQVQMVS--RMNM--QPMMLPMALQQQLQMSMMAPISMGMAGMGMGM 56
Query: 140 GLGTGMGMLDMNTMAAAAATARTAPQSLPP-----------------PIYSPAASVTLPD 182
G+G GMG++DMNT+AA + +P P P +P+A+V +PD
Sbjct: 57 GMGMGMGVVDMNTLAARSNITGVSPVLHPTAFMPMPTWDGSNSHERLPTAAPSATV-MPD 115
Query: 183 PYYAFLA---QSMNVELYNKMAALFRQQVKQN 211
P AFLA Q M ++ Y++MA++++Q +Q+
Sbjct: 116 PLSAFLACQSQPMTMDAYSRMASMYQQLHQQS 147
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 319 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 378
Query: 105 MNNVRNNMPQMNMMMPL 121
++ R P ++PL
Sbjct: 379 LSMSRVGAP--GAVLPL 393
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 35 HETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVID 93
H+ R RR A H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++D
Sbjct: 117 HQPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILD 176
Query: 94 YLKQLKAQVQMMNNVR 109
Y+K L+ QV++++ R
Sbjct: 177 YVKFLRLQVKVLSMSR 192
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+I+Y++ L+ QV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 105 MNNVR 109
++ R
Sbjct: 161 LSMSR 165
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 39 TGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
TG+ RR A H+ +ER RR++I ++MK LQ+LVPN++KTDKASMLDE+I+Y+K
Sbjct: 144 TGKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKF 203
Query: 98 LKAQVQMMNNVR 109
L+ QV++++ R
Sbjct: 204 LQLQVKVLSMSR 215
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+I+Y++ L+ QV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160
Query: 105 MNNVR 109
++ R
Sbjct: 161 LSMSR 165
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 135 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 194
Query: 105 MNNVR 109
++ R
Sbjct: 195 LSISR 199
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP A+KTD+A+M+DE++DY+K L+ QV++
Sbjct: 165 ARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRAAMIDEIVDYVKFLRLQVKV 224
Query: 105 MNNVR 109
++ R
Sbjct: 225 LSMSR 229
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 50 TAAVHNQS-ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
AAVH + RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++
Sbjct: 130 AAAVHQPPFGQLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMS 189
Query: 109 R 109
R
Sbjct: 190 R 190
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ+LVPN++KT+KASMLDE+IDY+K L+ QV++
Sbjct: 316 ARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKV 375
Query: 105 MNNVR 109
++ R
Sbjct: 376 LSMSR 380
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 135 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 194
Query: 105 MNNVR 109
++ R
Sbjct: 195 LSMSR 199
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ+LVPN++KT+KASMLDE+IDY+K L+ QV++
Sbjct: 316 ARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKV 375
Query: 105 MNNVR 109
++ R
Sbjct: 376 LSMSR 380
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ LVPN++K DKASMLDE+IDY+K L+ QV++
Sbjct: 284 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDYVKFLQLQVKV 343
Query: 105 MNNVRNNMPQMNMMMPL 121
++ R P ++PL
Sbjct: 344 LSMSRVGAP--GAVLPL 358
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 44/49 (89%)
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 251 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 299
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 135 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 194
Query: 105 MNNVR 109
++ R
Sbjct: 195 LSMSR 199
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+++MK LQ LVPN++K DK+SMLDE+IDY+K L+ QV++
Sbjct: 321 ARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKSSMLDEIIDYVKFLQLQVKV 380
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
+ R P ++PL + Q +
Sbjct: 381 LCMSRLGAP--GAVLPLLAESQTE 402
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 159 ARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 218
Query: 105 MNNVR 109
++ R
Sbjct: 219 LSMSR 223
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 44/49 (89%)
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 300
>gi|297816208|ref|XP_002875987.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
gi|297321825|gb|EFH52246.1| hypothetical protein ARALYDRAFT_348075 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 75/137 (54%), Gaps = 18/137 (13%)
Query: 47 RRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
R + A ++ ++RRD IN+KM+ LQ L+PN+ K D S+LDE I+Y+K L+ QVQMM
Sbjct: 130 RPQVPARTRKALKQRRD-INKKMRTLQDLLPNSHKDDNESVLDEAINYMKNLQLQVQMM- 187
Query: 107 NVRNNMPQMNMMMPL-GMQQQLQMSLLARMGMGVGLGTGM-------------GMLDMNT 152
+ N +MM+P GMQ Q L A + +G GL G+ G++ M
Sbjct: 188 TMGNTFVTPSMMLPFMGMQMGAQQFLPAHV-LGAGL-PGINDSADMLRFLNHPGLIQMQK 245
Query: 153 MAAAAATARTAPQSLPP 169
A T +PQS+PP
Sbjct: 246 SAPFTPTEDCSPQSVPP 262
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ+LVPN+++TDKASMLDE+I+Y+K L+ QV++
Sbjct: 300 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVKV 359
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQMS 130
++ R + ++PL Q Q + S
Sbjct: 360 LSMSR--LGATEAVVPLLTQSQTENS 383
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 26 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKV 85
Query: 105 MNNVR 109
++ R
Sbjct: 86 LSMSR 90
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 44/49 (89%)
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
RR+RI ++MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 252 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 300
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 7/106 (6%)
Query: 39 TGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
TG++ RR A H+ +ER RR++I ++MK LQ+LVPN++K DKASMLDE+I+Y+K
Sbjct: 235 TGKTRVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVDKASMLDEIIEYVKF 294
Query: 98 LKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQ----MSLLARMGMGV 139
L+ QV++++ R + ++PL Q + +SL G+G+
Sbjct: 295 LQLQVKVLSMSR--LGAAGAVIPLLTDGQPEGHNSLSLSPSAGLGI 338
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 171 ARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKV 230
Query: 105 MNNVR 109
++ R
Sbjct: 231 LSMSR 235
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 134 ARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKV 193
Query: 105 MNNVR 109
++ R
Sbjct: 194 LSMSR 198
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SS+R HN +E+RRR +IN+++K LQKLVP SK+++AS LD+ I Y+K L+ QVQ
Sbjct: 187 SSRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSKSNQASTLDQTIHYMKSLQQQVQ 246
Query: 104 MMN 106
M+
Sbjct: 247 AMS 249
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVPN +KTD+A MLDE++DY+K L+ QV++
Sbjct: 124 ARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAVMLDEILDYVKFLRLQVKV 183
Query: 105 MNNVR 109
++ R
Sbjct: 184 LSMSR 188
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK---TDKASMLDEVIDYLKQLKAQ 101
++R + H+ +ER RR+RI ++MKALQ+LVPNA+K TDKASMLDE+IDY+K L+ Q
Sbjct: 240 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQLQ 299
Query: 102 VQ 103
V+
Sbjct: 300 VK 301
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ LVPN +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 183 ARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKV 242
Query: 105 MNNVR 109
++ R
Sbjct: 243 LSMSR 247
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 48/56 (85%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H+ +ER RR+RI ++MKALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++++ R
Sbjct: 69 HSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 124
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI++++KALQ+LVPN +KTD+A+++DE++DY+K L+ QV++
Sbjct: 136 ARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRAALVDEILDYVKFLRLQVKV 195
Query: 105 MNNVR 109
++ R
Sbjct: 196 LSMSR 200
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++MKALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 168 ARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKV 227
Query: 105 MNNVR 109
++ R
Sbjct: 228 LSMSR 232
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 38 KTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
KT SS+R HN +E+RRR +IN+++K LQ++VP SK+++AS LD+ I Y+K
Sbjct: 165 KTPGGGSSRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSKSNQASTLDQTIHYMKS 224
Query: 98 LKAQVQMMNN 107
L+ QVQ M++
Sbjct: 225 LQHQVQAMSS 234
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI++++KALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 144 ARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKV 203
Query: 105 MNNVR 109
++ R
Sbjct: 204 LSMSR 208
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 55/75 (73%), Gaps = 4/75 (5%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ+LVPN+++TDKASMLDE+I+Y+K L+ QV+
Sbjct: 300 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNRTDKASMLDEIIEYVKFLQLQVK- 358
Query: 105 MNNVRNNMPQMNMMM 119
VR+ P + ++
Sbjct: 359 ---VRSPRPTIPLLC 370
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 53/65 (81%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI++++KALQ+LVP+ +KTD+A+MLDE++DY+K L+ QV++
Sbjct: 143 ARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRAAMLDEILDYVKFLRLQVKV 202
Query: 105 MNNVR 109
++ R
Sbjct: 203 LSMSR 207
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK---TDKASMLDEVIDYLKQLKAQ 101
++R + H+ +ER RR+RI ++MKALQ+LVPNA+K TDKASMLDE+IDY+K L+ Q
Sbjct: 252 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQ 311
Query: 102 VQ 103
V+
Sbjct: 312 VK 313
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ LVPN++K DKASMLDE+ID++K L+ QV++
Sbjct: 322 ARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKASMLDEIIDHVKFLQLQVKV 381
Query: 105 MNNVRNNMPQMNMMMPLGMQQQLQ 128
++ R P ++PL + Q +
Sbjct: 382 LSMSRLGAP--GAVLPLLAESQTE 403
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SS+R HN +E+RRR +IN++ K LQ++VP SK+++AS LD+ I Y+K L+ QVQ
Sbjct: 174 SSRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSKSNQASTLDQTIHYMKSLQHQVQ 233
Query: 104 MMNN 107
M++
Sbjct: 234 AMSS 237
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 36 ETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYL 95
E + + S R HN +E+RRR +IN+++K LQ+LVP SK+++AS LD+ I Y+
Sbjct: 151 EMRKAPAGGSSRSHHGEAHNLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYM 210
Query: 96 KQLKAQVQMMN 106
K L+ QVQ M+
Sbjct: 211 KSLQHQVQAMS 221
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 52/65 (80%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR+RI ++M+ALQ+LVP+ +K+D+A+MLDE++DY+K L+ QV++
Sbjct: 182 ARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRAAMLDEIVDYVKFLRLQVKV 241
Query: 105 MNNVR 109
++ R
Sbjct: 242 LSMSR 246
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 45/53 (84%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
H+ +ER RR RI +++KALQ+LVP +KTD+A+MLDE++DY+K L+ QV++++
Sbjct: 31 HSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQVKVLS 83
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQ 67
S+K KT T ++ + S N E+ + K H RR A H+ +ER RR++I++
Sbjct: 132 SIKDNKTATKSKNRGTCANSSNSKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISE 191
Query: 68 KMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
+MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 192 RMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 230
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 47/63 (74%), Gaps = 6/63 (9%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK------TDKASMLDEVIDYLKQL 98
++R + H+ +ER RR+RI ++MKALQ+LVPNA+K TDKASMLDE+IDY+K L
Sbjct: 287 ARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYVKFL 346
Query: 99 KAQ 101
+ Q
Sbjct: 347 QLQ 349
>gi|356496314|ref|XP_003517013.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 147
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
MK LQKLVPN+SKTDKASMLDEVI Y+KQL+AQVQMMN ++
Sbjct: 1 MKELQKLVPNSSKTDKASMLDEVIQYMKQLQAQVQMMNWMK 41
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 45/53 (84%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
H+ +ER RR RI +++KALQ+LVP +KTD+A+MLDE++DY+K L+ Q+++++
Sbjct: 27 HSIAERLRRVRITERVKALQELVPTCNKTDRAAMLDEIVDYVKFLRLQIKVLS 79
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
++R + H+ +ER RR++I+ +MK LQ+LVPN++KTDKASML+E+I+Y+K L+ Q ++
Sbjct: 284 ARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNKTDKASMLEEIIEYIKFLQLQTKV 343
Query: 105 MNNVRNNMPQMNMMMPLGM 123
++ R + + ++PL M
Sbjct: 344 LSMSR--LGATDALVPLLM 360
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN 116
R RR+RIN+K++ LQKLVP SK D ASMLDE +YLK L++QV+ + ++ N + MN
Sbjct: 350 RHRRERINEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKVDAMN 407
>gi|357441955|ref|XP_003591255.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480303|gb|AES61506.1| Transcription factor PIF3 [Medicago truncatula]
Length = 555
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 11 KSLKTKTTD-EDSASHGRSEN-QDEDHETKTGRSH----SSKRRRTAAVHNQSERRRRDR 64
+ LK K+ D EDS H SE+ +DE K G + SKR R A VHN SERRRRDR
Sbjct: 426 RDLKRKSRDTEDSECH--SEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDR 483
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
IN+KM+ALQ+L+PN +K S L+ LK +++
Sbjct: 484 INEKMRALQELIPNC---NKVSFFPSDFALLRYLKNCIKL 520
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
R+RR+RI++K++ LQ LVP +K D ASMLDE +YLK L+AQV+ + N+R + Q N+
Sbjct: 287 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL 345
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP K T KA MLDE+I+Y+
Sbjct: 155 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYV 214
Query: 96 KQLKAQVQMMN-NVRNNMPQMNM---------------------MMPLGMQQQLQMSLLA 133
+ L+ QV+ ++ + + P +N MP+ + Q+ S L
Sbjct: 215 QSLQKQVEFLSMKIAASNPVVNFDIVEDLFGGRRLGQACSPAAATMPMPIHGQMDTSCLQ 274
Query: 134 RMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPPPIYSPAASVTLPDPYYAFLAQSMN 193
M G G+ + A +R P + PPP+ + A+ + D A +
Sbjct: 275 MQQMHQPAAAGFGLEMVVNNQYTPAQSRPLPAATPPPVSAGASVESCLDVNGAAAWDIGS 334
Query: 194 VELYNKMAALFRQQVKQNTI 213
L++ A F QQV+ + +
Sbjct: 335 QNLFSGFDAQF-QQVQSDCL 353
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
R+RR+RI++K++ LQ LVP +K D ASMLDE +YLK L+AQV+ + N+R + Q N+
Sbjct: 314 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL 372
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
R+RR+RI++K++ LQ LVP +K D ASMLDE +YLK L+AQV+ + N+R + Q N+
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL 343
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
SS R H +E+RRR +IN+++K LQ+LVP SK+++AS LD+ I Y+K L+ QVQ
Sbjct: 165 SSWRSHHGEAHKLTEKRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQQQVQ 224
Query: 104 MMN 106
M+
Sbjct: 225 AMS 227
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKL 75
++DE++A + E ++E E H RR A H+ +ER RR RI+++MK LQ L
Sbjct: 220 SSDENAAVPAKVELEEEKPEPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSL 279
Query: 76 VPNASK-TDKASMLDEVIDYLKQLKAQVQMMNNVRNNM-PQMNM 117
VP +K T KA MLDE+I+Y++ L+ QV+ ++ + M PQ+++
Sbjct: 280 VPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLDL 323
>gi|224108413|ref|XP_002314839.1| predicted protein [Populus trichocarpa]
gi|222863879|gb|EEF01010.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 46 KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
KR R+A +HN S R RDRI K++ALQ+L+PN K D+ SML++ ++YLK LK QV+++
Sbjct: 20 KRTRSAEMHNVS--RPRDRIKGKLRALQELIPNCHKQDRPSMLEDAVEYLKALKLQVEVI 77
Query: 106 N----NVRNNMPQMNMMMPLGMQ 124
V +P +N+ + L ++
Sbjct: 78 TLSVIAVLQALPAINLFLFLSIR 100
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
E S H + D D + +KR + H+ +ER RR++IN++MK LQ LVP
Sbjct: 605 ELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 664
Query: 80 SK-TDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGM 137
+K T KA MLDE+I+Y++ L+ QV+ ++ + P++N + L Q + S AR
Sbjct: 665 NKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDL---QDILCSQDARSAF 721
Query: 138 GVGLGTGMGMLDMNTMAAAAATARTAPQSLPPP-IYSPAASVTLPDPYYAFLAQSMNVEL 196
LG + + A R A Q L PP +Y SV +P+P LA++ ++
Sbjct: 722 ---LGCSPQLSN-----AHPNLYRAAQQCLSPPGLY---GSVCVPNPADVHLARAGHLAS 770
Query: 197 YNKMAALFRQQVK 209
+ + ++ ++++
Sbjct: 771 FPQRGLIWNEELR 783
>gi|413922334|gb|AFW62266.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 322
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
H+++ERRRR RIN + L+ L+PN SKTDKAS+L EVI+++K+LK Q + +V
Sbjct: 151 HSEAERRRRQRINSHLARLRSLLPNTSKTDKASLLAEVIEHVKELKRQTSAVLDVEGE 208
>gi|147845457|emb|CAN83346.1| hypothetical protein VITISV_042277 [Vitis vinifera]
Length = 489
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
IN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQ
Sbjct: 196 INEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 234
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRI 65
+SL S ++ D + + G S + D+ T S+ R +A QS RRRR++I
Sbjct: 209 QSLSSCCSEDDDSNELNGGGSSSLDQKDSTTIKLKGKSRSERGSATDPQSIYARRRREKI 268
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---G 122
N+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ + M P+ G
Sbjct: 269 NERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS-----DDLWMYAPIAFNG 323
Query: 123 MQQQLQMSLL 132
M L ++L
Sbjct: 324 MNIGLDLNLF 333
>gi|28393737|gb|AAO42279.1| unknown protein [Arabidopsis thaliana]
Length = 373
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
R+RR+RI++K++ LQ LVP +K D ASMLDE +Y K L+AQV+ + N+R + Q N+
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYFKFLRAQVKALENLRPKLDQTNL 343
>gi|355320016|emb|CBY88797.1| basic helix-loop-helix transcription factor [Humulus lupulus]
Length = 695
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 6/108 (5%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S G D T++ R + + +A H +ERRRR+++N++
Sbjct: 437 SVPLLHTKYRDENSPKAGAG-----DTTTRSFRKGGTPQDELSANHVMAERRRREKLNER 491
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN 116
L+ LVP +K DKAS+L + I+Y+KQL+ +VQ + + RN + +++
Sbjct: 492 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQDLES-RNRLMELD 538
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
E E+ E G H RR A H+ +ER RR++I+++MK LQ LVP K T KA
Sbjct: 120 ERTQEEEEAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAV 179
Query: 87 MLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMG 136
MLDE+I+Y++ L+ QV+ ++ + P M+ G+ + QM+ L R+G
Sbjct: 180 MLDEIINYVQSLQNQVEFLSMKLATVSP---MLYEFGLDIEGQMNDLERVG 227
>gi|293332391|ref|NP_001168665.1| uncharacterized protein LOC100382453 [Zea mays]
gi|223950025|gb|ACN29096.1| unknown [Zea mays]
gi|414877116|tpg|DAA54247.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 398
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
ES + K K+ E SAS + DE + +KR RTA VHN SERRRRDRIN+
Sbjct: 317 ESWREQKRKSQAECSASQD-DDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINE 375
Query: 68 KMKALQKLVPNASKTDKA 85
KM+ALQ+L+PN +K ++
Sbjct: 376 KMRALQELIPNCNKVRRS 393
>gi|242035095|ref|XP_002464942.1| hypothetical protein SORBIDRAFT_01g029220 [Sorghum bicolor]
gi|241918796|gb|EER91940.1| hypothetical protein SORBIDRAFT_01g029220 [Sorghum bicolor]
Length = 201
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 35/36 (97%)
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
MK LQKLVPN++KTDKASMLDEVIDYLKQL+AQVQ+
Sbjct: 1 MKTLQKLVPNSNKTDKASMLDEVIDYLKQLQAQVQV 36
>gi|18378953|ref|NP_563650.1| transcription factor HFR1 [Arabidopsis thaliana]
gi|20532238|sp|Q9FE22.1|HFR1_ARATH RecName: Full=Transcription factor HFR1; AltName: Full=Basic
helix-loop-helix protein 26; Short=AtbHLH26; Short=bHLH
26; AltName: Full=Protein LONG HYPOCOTYL IN FAR-RED 1;
AltName: Full=Protein REDUCED PHYTOCHROME SIGNALING;
AltName: Full=Reduced sensitivity to far-red light;
AltName: Full=Transcription factor EN 68; AltName:
Full=bHLH transcription factor bHLH026
gi|11870115|gb|AAG40617.1|AF324245_1 bHLH-like protein HFR1 [Arabidopsis thaliana]
gi|12025106|gb|AAG45733.1|AF288287_1 reduced phytochrome signaling 1 [Arabidopsis thaliana]
gi|13183644|gb|AAK15282.1|AF323182_1 basic helix-loop-helix FBI1 protein [Arabidopsis thaliana]
gi|332189297|gb|AEE27418.1| transcription factor HFR1 [Arabidopsis thaliana]
Length = 292
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 57 SERRRRD-RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
S+RRRRD +++ KM+ LQ+LVPN KTDK S+LD+ I+Y+K L+ Q+QMM+ V N +
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTVGVNPYFL 200
Query: 116 NMMMPLGMQQQLQMSLLARMGM 137
+ GM + ++ + G+
Sbjct: 201 PATLGFGMHNHMLTAMASAHGL 222
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN 116
R RR+RI++K++ LQKLVP SK D ASMLDE +YLK L++QV+ + ++ N + MN
Sbjct: 348 RHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKVDAMN 405
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
T TT + S G+ +Q D + ++R + H+ +ER RR++I+++MK LQ
Sbjct: 341 TSTTSKASGKQGKQGSQGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 400
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 401 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 433
>gi|223946943|gb|ACN27555.1| unknown [Zea mays]
Length = 386
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
ES + K K+ E SAS + DE + +KR RTA VHN SERRRRDRIN+
Sbjct: 312 ESWREQKRKSQAECSASQD-DDLDDESGGMRGSGGRGTKRSRTAEVHNLSERRRRDRINE 370
Query: 68 KMKALQKLVPNASK 81
KM+ALQ+L+PN +K
Sbjct: 371 KMRALQELIPNCNK 384
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 17/171 (9%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 127 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 186
Query: 104 MMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATART 162
++ + P++N + L Q + S AR LG + + A R
Sbjct: 187 FLSMKLSTISPELNSDLDL---QDILCSQDARSAF---LGCSPQLSN-----AHPNLYRA 235
Query: 163 APQSLPPP-IYSPAASVTLPDPYYAFLAQSMNVELYNKMAALFRQQVKQNT 212
A Q L PP +Y SV +P+P LA++ ++ + + L + +N
Sbjct: 236 AQQCLSPPGLY---GSVCVPNPADVHLARAGHLASFPQQRGLIWNEELRNI 283
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 26 GRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TD 83
GRS + ++ E G H RR A H+ +ER RR+RI+++M+ LQ LVP K T
Sbjct: 103 GRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTG 162
Query: 84 KASMLDEVIDYLKQLKAQVQMMN 106
KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 163 KALVLDEIINYVQSLQNQVEFLS 185
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR+RI+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 248 AKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVE 307
Query: 104 MMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGM 147
++ + P+MN+ + + + S + G LG G GM
Sbjct: 308 FLSMKLATVYPEMNVQIERILSSDIHHS---KGGTAPILGFGPGM 349
>gi|18407096|ref|NP_566078.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
gi|75315651|sp|Q9ZPY8.2|AIB_ARATH RecName: Full=Transcription factor ABA-INDUCIBLE bHLH-TYPE;
Short=AtAIB; AltName: Full=Basic helix-loop-helix
protein 17; Short=AtbHLH17; Short=bHLH 17; AltName:
Full=Transcription factor EN 35; AltName: Full=bHLH
transcription factor bHLH017
gi|20197775|gb|AAD20162.2| putative bHLH transcription factor [Arabidopsis thaliana]
gi|20197823|gb|AAM15265.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255618|gb|AEC10712.1| transcription factor ABA-INDUCIBLE bHLH-TYPE [Arabidopsis thaliana]
Length = 566
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 375 DEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433
Query: 92 IDYLKQLKAQVQMMNNVR 109
I Y+K+L+ +V++M + R
Sbjct: 434 ISYIKELQEKVKIMEDER 451
>gi|168042679|ref|XP_001773815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674930|gb|EDQ61432.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 418
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 38 KTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
+ R + T+A H +ERRRR+++N + AL++L+PN SK DKAS+L I+Y+K+
Sbjct: 197 RVTRLYDGASEETSASHVLAERRRREKLNDRFVALRELIPNVSKMDKASILGVAIEYVKE 256
Query: 98 LKAQVQMMNN 107
L++Q++ + N
Sbjct: 257 LQSQLRALEN 266
>gi|297828381|ref|XP_002882073.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327912|gb|EFH58332.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 563
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 375 DEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433
Query: 92 IDYLKQLKAQVQMMNNVR 109
I Y+K+L+ +V++M + R
Sbjct: 434 ISYIKELQEKVKIMEDER 451
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
E S H + D D + +KR + H+ +ER RR++IN++MK LQ LVP
Sbjct: 605 ELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 664
Query: 80 SK-TDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGM 137
+K T KA MLDE+I+Y++ L+ QV+ ++ + P++N + L Q + S AR
Sbjct: 665 NKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDL---QDILCSQDARSAF 721
Query: 138 GVGLGTGMGMLDMNTMAAAAATARTAPQSLPPP-IYSPAASVTLPDPYYAFLAQSMNVEL 196
LG + + A R A Q L PP +Y SV +P+P LA++ ++
Sbjct: 722 ---LGCSPQLSN-----AHPNLYRAAQQCLSPPGLY---GSVCVPNPADVHLARAGHLAS 770
Query: 197 YNKMAALFRQQVKQN 211
+ + L + +N
Sbjct: 771 FPQQRGLIWNEELRN 785
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 26 GRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TD 83
GRS + ++ E G H RR A H+ +ER RR+RI+++M+ LQ LVP K T
Sbjct: 93 GRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTG 152
Query: 84 KASMLDEVIDYLKQLKAQVQMMN 106
KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 153 KALVLDEIINYVQSLQNQVEFLS 175
>gi|242049242|ref|XP_002462365.1| hypothetical protein SORBIDRAFT_02g024460 [Sorghum bicolor]
gi|241925742|gb|EER98886.1| hypothetical protein SORBIDRAFT_02g024460 [Sorghum bicolor]
Length = 353
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EV+D++K+LK Q M
Sbjct: 119 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVLDHVKELKRQTSAM 170
>gi|357141441|ref|XP_003572226.1| PREDICTED: transcription factor AIG1-like [Brachypodium distachyon]
Length = 367
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q + V +
Sbjct: 138 HSEAERRRRQRINSHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAIMAVSSASG 197
Query: 114 QMNMMMPLGMQQQLQM 129
+ + P +Q+QL +
Sbjct: 198 EDHAAAP-AVQRQLLL 212
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
T ++ + HG+ +Q D + ++R + H+ +ER RR++I+++MK LQ+LV
Sbjct: 299 TANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELV 358
Query: 77 PNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
P SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 359 PGCSKVTGKAVMLDEIINYVQSLQRQVEFL 388
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 200 QSLQKQVEFLS 210
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 200 QSLQKQVEFLS 210
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
E S H + D D + +KR + H+ +ER RR++IN++MK LQ LVP
Sbjct: 605 ELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGC 664
Query: 80 SK-TDKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGM 137
+K T KA MLDE+I+Y++ L+ QV+ ++ + P++N + L Q + S AR
Sbjct: 665 NKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPELNSDLDL---QDILCSQDARSAF 721
Query: 138 GVGLGTGMGMLDMNTMAAAAATARTAPQSLPPP-IYSPAASVTLPDPYYAFLAQS 191
LG + + A R A Q L PP +Y SV +P+P LA++
Sbjct: 722 ---LGCSPQLSN-----AHPNLYRAAQQCLSPPGLY---GSVCVPNPADVHLARA 765
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 33 EDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDE 90
ED TG H RR A H+ +ER RR++I+++MK LQ+LVP K T KA MLDE
Sbjct: 169 EDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDE 228
Query: 91 VIDYLKQLKAQVQMMN 106
+I+Y++ L+ QV+ ++
Sbjct: 229 IINYVQSLQNQVEFLS 244
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 10/97 (10%)
Query: 40 GRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
G + S+ R +A QS R+RR+RIN++++ LQKLVPN +K D ++ML+E + Y+K
Sbjct: 232 GVNRKSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKF 291
Query: 98 LKAQVQMMNNVRNNMPQMNMMMPL---GMQQQLQMSL 131
L+ Q++++++ +M M PL GM LQ +L
Sbjct: 292 LQLQIKLLSS-----DEMWMFAPLAYNGMDIGLQHNL 323
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 27 RSENQDE----DHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK 81
++E +D+ D E TG H RR A H+ +ER RR++I+++MK LQ+LVP K
Sbjct: 151 KAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDK 210
Query: 82 -TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 211 VTGKALMLDEIINYVQSLQNQVEFLS 236
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
T ++ + HG+ +Q D + ++R + H+ +ER RR++I+++MK LQ+LV
Sbjct: 343 TANKGTGKHGKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELV 402
Query: 77 PNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
P SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 403 PGCSKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|20453066|gb|AAM19778.1| At2g46510/F13A10.4 [Arabidopsis thaliana]
Length = 566
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H + ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 375 DEKRPRKRGRKPANGREEPLN-HVEVERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433
Query: 92 IDYLKQLKAQVQMMNNVR 109
I Y+K+L+ +V++M + R
Sbjct: 434 ISYIKELQEKVKIMEDER 451
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 33 EDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDE 90
ED TG H RR A H+ +ER RR++I+++MK LQ+LVP K T KA MLDE
Sbjct: 137 EDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDE 196
Query: 91 VIDYLKQLKAQVQMMN 106
+I+Y++ L+ QV+ ++
Sbjct: 197 IINYVQSLQNQVEFLS 212
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 19 DEDSASH---GRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQ 73
DE ++SH GR + +++ S S+ R A QS R+RR+RIN+++K LQ
Sbjct: 195 DESNSSHEPRGRESSSLSLNDSAAKLSGKSRSSRGPATDPQSLYARKRRERINERLKILQ 254
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLLA 133
LVPN +K D ++ML+E + Y+K L+ Q+++ L S +A
Sbjct: 255 NLVPNGTKVDISTMLEEAVQYVKFLQLQIKL----------------LSSDDTWMYSPIA 298
Query: 134 RMGMGVGLGTGM 145
GM +GL G+
Sbjct: 299 YNGMNIGLELGI 310
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKA 85
S+N ED ++ R +A QS R+RR+RIN++++ LQKLVPN +K D +
Sbjct: 220 SDNSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDIS 279
Query: 86 SMLDEVIDYLKQLKAQVQMM--NNVRNNMPQMNMMMPLGMQQQL 127
+ML+E + Y+K L+ Q++++ +++ P M +G+QQ+L
Sbjct: 280 TMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKL 323
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
+T+ A+ + + ++E H T+ R S S KR RTA +HN +ERRRR++IN+KMK L
Sbjct: 219 ETEPVQIQPATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTL 278
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
Q+L+P +K + D V + LK Q MM
Sbjct: 279 QQLIPRCNKVES----DSVSTLISLLKFQRWMM 307
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++M+ LQ LVPN K T+ A MLD +DY+K+L+ Q +
Sbjct: 285 KRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKT 344
Query: 105 MNNVRNNMPQMNMMMPLGMQ 124
+++ R N +NM PL Q
Sbjct: 345 LSDNRANCVCVNMQKPLSNQ 364
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 26 GRSENQDEDHETK-TGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-T 82
GRS + ED E + G H RR A H+ +ER RR+RI+++M+ LQ LVP K T
Sbjct: 101 GRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVT 160
Query: 83 DKASMLDEVIDYLKQLKAQVQMMN 106
KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 161 GKALVLDEIINYVQSLQNQVEFLS 184
>gi|449462019|ref|XP_004148739.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
gi|449514569|ref|XP_004164415.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
Length = 661
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQK AL+ +VPN SK DKAS+L + + Y+ +LK+++QM + + +M
Sbjct: 478 HVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAVSYINELKSKLQMAESEKTDM 536
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKA 85
S+N ED ++ R +A QS R+RR+RIN++++ LQKLVPN +K D +
Sbjct: 220 SDNSSEDDNNNASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDIS 279
Query: 86 SMLDEVIDYLKQLKAQVQMM--NNVRNNMPQMNMMMPLGMQQQL 127
+ML+E + Y+K L+ Q++++ +++ P M +G+QQ+L
Sbjct: 280 TMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLQQKL 323
>gi|168032827|ref|XP_001768919.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679831|gb|EDQ66273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 532
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 19/118 (16%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPN-ASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H SER RR +N L+ L+P+ SKTDK++++ E+I Y++ L+ +++M+ R
Sbjct: 267 HIWSERERRKGMNCLFTRLRNLLPHPTSKTDKSTVIGEIIKYIQSLQVKLEMLTKKR--- 323
Query: 113 PQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPPP 170
QQ+ ++LAR GM V +G+ ++D + ++ TA TA LPPP
Sbjct: 324 ------------QQVMAAVLARPGMFVSNNSGLTLVDHSNFDPSSMTAITA---LPPP 366
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR+RI+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 236 AKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 295
Query: 104 MMN-NVRNNMPQMNMMMPLGMQQQL---QMSLLARMGMGVGLGT-----GMGMLDMNTMA 154
++ + P++N+ + + + + + S +G+G GL + G+ +N
Sbjct: 296 FLSMKLATVNPELNVDIERLLSKDILHSRGSNATALGIGPGLSSSHPFQGLPQGTLNAFP 355
Query: 155 AAAATARTAPQSL 167
A ++ PQ+L
Sbjct: 356 GTAPQFQSLPQNL 368
>gi|297736583|emb|CBI25454.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 44 SSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
S +R TA+ H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L VID++K LK Q
Sbjct: 102 SDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSVIDHVKDLKRQA 161
Query: 103 QMMNNV 108
+++V
Sbjct: 162 MEVSDV 167
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 175
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 13/71 (18%)
Query: 62 RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-------------NV 108
R+RIN++MK LQ+L+P KTDK SML++VI+Y+K L+ Q+QMM+ N
Sbjct: 1 RERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNT 60
Query: 109 RNNMPQMNMMM 119
+ MP M M M
Sbjct: 61 QQFMPHMAMGM 71
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR-RTAAVHNQS--ERRRRDRINQKMKA 71
T DS S+ E+ D D + R R R+A QS R+RR+RIN+++K
Sbjct: 195 TSCCTSDSDSNASLESADGDGDADARRPKGKGRAGRSATTEPQSIYARKRRERINERLKI 254
Query: 72 LQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSL 131
LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ M P
Sbjct: 255 LQNLVPNGTKVDISTMLEEAVHYVKFLQLQIRLLSS-----DDTWMYAP----------- 298
Query: 132 LARMGMGVGLGTGMGM 147
+A GM +G+G + M
Sbjct: 299 IAYNGMNIGIGIDLNM 314
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK QVQ + N P
Sbjct: 161 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRP 215
>gi|242081549|ref|XP_002445543.1| hypothetical protein SORBIDRAFT_07g021170 [Sorghum bicolor]
gi|241941893|gb|EES15038.1| hypothetical protein SORBIDRAFT_07g021170 [Sorghum bicolor]
Length = 392
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q
Sbjct: 168 HSEAERRRRQRINSHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQT 216
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI+ K++ LQ+LVP +K D ASMLDE I Y+K LK+QVQ M
Sbjct: 300 RHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAM 346
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 32 DEDHETKTGRSHSSKRRRTAAV-HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLD 89
D K G SH R+ A H+ +ER RR++I+++MK LQ LVP SK T KA MLD
Sbjct: 164 DAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLD 223
Query: 90 EVIDYLKQLKAQVQMMN 106
E+I+Y++ L+ QV+ ++
Sbjct: 224 EIINYVQSLQRQVEFLS 240
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 147 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 206
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 207 QSLQKQVEFLS 217
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
R RR+RI+ K++ LQ+LVP +K D ASMLDE I Y+K LK+QVQ M
Sbjct: 299 RHRRERISTKIRILQRLVPGGTKMDTASMLDEAIHYVKYLKSQVQAME 346
>gi|115476548|ref|NP_001061870.1| Os08g0432800 [Oryza sativa Japonica Group]
gi|42409474|dbj|BAD09830.1| DNA-binding protein-like [Oryza sativa Japonica Group]
gi|113623839|dbj|BAF23784.1| Os08g0432800 [Oryza sativa Japonica Group]
gi|215766517|dbj|BAG98825.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q M
Sbjct: 125 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM 176
>gi|302807648|ref|XP_002985518.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
gi|300146724|gb|EFJ13392.1| hypothetical protein SELMODRAFT_451590 [Selaginella moellendorffii]
Length = 551
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 11/95 (11%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
S+ DED E TGRS RR + + +ER+RR ++N+++ +L+ LVP +K D+AS+
Sbjct: 314 SDQVDEDDEKATGRS----GRRHLSKNLVAERKRRKKLNERLYSLRALVPKITKMDRASI 369
Query: 88 LDEVIDYLKQLKAQVQMMNN-------VRNNMPQM 115
L + I+Y+K+L+ QV+ + + NN+P M
Sbjct: 370 LGDAIEYVKELQQQVKELQDELEDDSQAANNIPTM 404
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKA 85
SE+Q ED+ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 246 SESQKEDY------IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKA 299
Query: 86 SMLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 300 VMLDEIINYVQSLQRQVEFLS 320
>gi|168019991|ref|XP_001762527.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686260|gb|EDQ72650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 594
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
R RR+RI+ +++ LQ+LVP +K D ASMLDE I Y+K LK Q+Q + + NN
Sbjct: 448 RHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYVKFLKLQLQTLEQIGNN 500
>gi|302820581|ref|XP_002991957.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
gi|300140199|gb|EFJ06925.1| hypothetical protein SELMODRAFT_430203 [Selaginella moellendorffii]
Length = 551
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 11/95 (11%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
S+ DED E TGRS RR + + +ER+RR ++N+++ +L+ LVP +K D+AS+
Sbjct: 314 SDQVDEDDEKATGRS----GRRHLSKNLVAERKRRKKLNERLYSLRALVPKITKMDRASI 369
Query: 88 LDEVIDYLKQLKAQVQMMNN-------VRNNMPQM 115
L + I+Y+K+L+ QV+ + + NN+P M
Sbjct: 370 LGDAIEYVKELQQQVKELQDELEDDSQAANNIPAM 404
>gi|359486390|ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like [Vitis vinifera]
Length = 252
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 44 SSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
S +R TA+ H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L VID++K LK Q
Sbjct: 57 SDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSVIDHVKDLKRQA 116
Query: 103 QMMNNV 108
+++V
Sbjct: 117 MEVSDV 122
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+R++++++ LQKLVP SK D ASMLDE YLK LK+QVQ + +
Sbjct: 302 RLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALETL 351
>gi|218201192|gb|EEC83619.1| hypothetical protein OsI_29333 [Oryza sativa Indica Group]
Length = 352
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q M
Sbjct: 132 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM 183
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+R++++++ LQKLVP SK D ASMLDE YLK LK+QVQ + +
Sbjct: 301 RLRRERVSERLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALETL 350
>gi|339716196|gb|AEJ88337.1| putative MYC protein, partial [Tamarix hispida]
Length = 521
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 13 LKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
L+ + DSAS R + E K GR ++ R H ++ER+RR+++NQ+ AL
Sbjct: 416 LEASVKEADSAS--RVVDPAEKKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYAL 472
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ +VPN SK DKAS+L + I Y+K+LK+++Q
Sbjct: 473 RAVVPNVSKMDKASLLGDAISYIKELKSKLQ 503
>gi|356497663|ref|XP_003517679.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 648
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%), Gaps = 11/75 (14%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++Q + + ++
Sbjct: 466 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTLESDKD--- 522
Query: 114 QMNMMMPLGMQQQLQ 128
GMQ+QL+
Sbjct: 523 --------GMQKQLE 529
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 197 QSLQKQVEFLS 207
>gi|414589483|tpg|DAA40054.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 348
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EV+D++K+LK Q
Sbjct: 114 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVLDHVKELKRQ 161
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 200 QSLQKQVEFLS 210
>gi|357158353|ref|XP_003578101.1| PREDICTED: transcription factor bHLH30-like [Brachypodium
distachyon]
Length = 329
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EV++++K+LK Q M
Sbjct: 110 HSEAERRRRQRINAHLARLRSLLPNTTKTDKASLLAEVLEHVKELKRQTSAMT 162
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 197 QSLQKQVEFLS 207
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Query: 12 SLKTKTTDEDSASHGR-----SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRI 65
SL T TT S G+ SE+Q ED+ H RR A H+ +ER RR++I
Sbjct: 223 SLATTTTGP-GKSKGKGARETSESQKEDY------IHVRARRGQATNSHSLAERLRREKI 275
Query: 66 NQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 276 SERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 317
>gi|145334163|ref|NP_001078462.1| transcription factor bHLH119 [Arabidopsis thaliana]
gi|218563522|sp|Q8GT73.2|BH119_ARATH RecName: Full=Transcription factor bHLH119; AltName: Full=Basic
helix-loop-helix protein 119; Short=AtbHLH119;
Short=bHLH 119; AltName: Full=Transcription factor EN
104; AltName: Full=bHLH transcription factor bHLH119
gi|332660147|gb|AEE85547.1| transcription factor bHLH119 [Arabidopsis thaliana]
Length = 544
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 13/91 (14%)
Query: 42 SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
S S KR R A +HN SERRRR+RIN++MK LQ+L+P KTDK SML++VI+Y+K L+ Q
Sbjct: 350 STSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQ 409
Query: 102 VQMMN-------------NVRNNMPQMNMMM 119
+QMM+ N + MP M M M
Sbjct: 410 IQMMSMGHGMMPPMMHEGNTQQFMPHMAMGM 440
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 8 ESLKSLKTKTTDEDS-ASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRIN 66
E +SL + T + DS AS GR + + + K R +++ + A R+RR+RIN
Sbjct: 180 EDGQSLSSCTFENDSNASQGRPVSDNLGGKAKADRRSATESQSLYA------RKRRERIN 233
Query: 67 QKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---GM 123
++++ LQ LVPN +K D ++ML+E ++Y+K L+ Q++++++ +M M P+ GM
Sbjct: 234 ERLRILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSS-----DEMWMYAPIAYNGM 288
Query: 124 QQQLQMSLLAR 134
+ ++L R
Sbjct: 289 NIGIDLNLSQR 299
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
T TT +D+ G+ + D + ++R + H+ +ER RR++I+++MK LQ
Sbjct: 122 TSTTSKDAGKQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 181
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 182 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 214
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 18/99 (18%)
Query: 45 SKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
S+ R AA QS R+RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q+
Sbjct: 216 SRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQI 275
Query: 103 QMMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGL 141
+++++ +M M P +A GM +GL
Sbjct: 276 KLLSS-----DEMWMYAP-----------IAYNGMNIGL 298
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E TG H RR A H+ +ER RR++I+++MK LQ+LVP K T KA MLDE+I+
Sbjct: 139 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 198
Query: 94 YLKQLKAQVQMM 105
Y++ L+ QV+ +
Sbjct: 199 YVQSLQNQVEFL 210
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 3 TWASYESLKSLKTKTTDEDSASHGRSENQDE--DHETKTGRSHSSKRRRTAAV-HNQSER 59
+ AS+ S +S + + + S G+ + + D E G H RR A H+ +ER
Sbjct: 68 SGASFSSARSKDSNSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAER 127
Query: 60 RRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
RR+RI+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 128 VRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 175
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 196
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 197 QSLQKQVEFLS 207
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 76/125 (60%), Gaps = 13/125 (10%)
Query: 31 QDEDHETKTGRS------HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-T 82
Q +D+ +++G + H RR A H+ +ER RR++I+++M+ LQ+LVP +K T
Sbjct: 244 QAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKIT 303
Query: 83 DKASMLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG- 140
KA MLDE+I+Y++ L+ QV+ ++ + P++N + + + + L +R+G G+G
Sbjct: 304 GKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVDRILSKDI---LQSRIGHGIGA 360
Query: 141 LGTGM 145
G G+
Sbjct: 361 YGPGI 365
>gi|73760264|dbj|BAE20057.1| bHLH transcription factor [Lilium hybrid division I]
Length = 686
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN 110
+A H SERRRR+++N+K L+ LVP+ +K DKAS+L + I+YLK+L+ +++ + + R
Sbjct: 475 SASHVISERRRREKLNEKFLVLKSLVPSITKVDKASILGDTIEYLKELQRRIEELESCRK 534
Query: 111 NM 112
++
Sbjct: 535 SV 536
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 3 TWASYESLKSLKTKTTDEDSASHGRSENQDE--DHETKTGRSHSSKRRRTAAV-HNQSER 59
+ AS+ S +S + + + S G+ + + D E G H RR A H+ +ER
Sbjct: 68 SGASFSSARSKDSNSKESSKRSGGKRDRSSKKVDEEEPKGYIHVRARRGQATDNHSLAER 127
Query: 60 RRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
RR+RI+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 128 VRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 175
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 11/106 (10%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKT------GRSHSSKRRRTAA-VHNQSERRR 61
SL S +K T E + G + +D ET G H RR A H+ SER R
Sbjct: 67 SLNSAHSKETKESTRKRG---GKKQDKETAEEEEEPKGYIHVRARRGQATDSHSLSERVR 123
Query: 62 RDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
R+RI+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 124 RERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQVEFLS 169
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
T T ++ S G+ +Q D + ++R + H+ +ER RR++I+++MK LQ
Sbjct: 343 TSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQD 402
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 403 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 435
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 271 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 330
Query: 104 MMN-NVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG-LGTGM 145
++ + P++N + + + + L +R+G G+G G G+
Sbjct: 331 FLSMKLATVNPELNFDVDRILSKDI---LQSRIGHGIGAYGPGI 371
>gi|399145795|gb|AFP25102.1| ICE1 [Camellia sinensis]
Length = 518
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRI 65
+Y+S + ++ +E + G S N + T TG K+R A + +ERRRR ++
Sbjct: 288 NYDSDEFMENNKVEESGKNGGNSSNANS---TVTGGDQKGKKRGLPAKNLMAERRRRKKL 344
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
N ++ L+ +VP SK D+AS+L + I+YLK+L +++ ++N + P + + P
Sbjct: 345 NDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKIKDLHNELESNPPGSSLTP 399
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ +R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K+L+ QV
Sbjct: 301 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQV 360
Query: 103 QMMNNVRNN 111
+++N R N
Sbjct: 361 KVINESRAN 369
>gi|356504177|ref|XP_003520875.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 550
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 369 DERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDT 427
Query: 92 IDYLKQLKAQVQMM 105
I Y+ +L+A+V++M
Sbjct: 428 IAYINELQAKVKIM 441
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKA 85
SE+Q E++ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 619 SESQKEEY------IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKA 672
Query: 86 SMLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 673 VMLDEIINYVQSLQRQVEFLS 693
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP +K T KA MLDE+I+Y+
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 218 QSLQKQVEFLS 228
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E TG H RR A H+ +ER RR++I+++MK LQ+LVP K T KA MLDE+I+
Sbjct: 156 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIIN 215
Query: 94 YLKQLKAQVQMM 105
Y++ L+ QV+ +
Sbjct: 216 YVQSLQNQVEFL 227
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
+ TT + + G+ ++Q D + ++R + H+ +ER RR++I+++M+ LQ
Sbjct: 313 SSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQD 372
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
LVP SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 373 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP SK T KA MLDE+I+Y+
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYV 199
Query: 96 KQLKAQVQM 104
+ L+ QV++
Sbjct: 200 QSLQKQVEV 208
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 14/120 (11%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRR----RTAAVHNQS--ERRRRDRINQKMKALQ 73
ED+AS QD + ++K + +SK + R +A QS R+RR+RIN++++ LQ
Sbjct: 214 EDNAS------QDSNGDSKVSEALNSKGKARAGRGSATDPQSLYARKRRERINERLRILQ 267
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMM--NNVRNNMPQMNMMMPLGMQQQLQMSL 131
LVPN +K D ++ML+E + Y+K L+ Q++++ +++ P M +G+ Q++ M L
Sbjct: 268 NLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNQKICMLL 327
>gi|125563693|gb|EAZ09073.1| hypothetical protein OsI_31335 [Oryza sativa Indica Group]
Length = 363
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q
Sbjct: 110 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 157
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
R RR+RI+++M+ LQ+LVP +K D ASMLDE I Y+K LK QVQ + N P
Sbjct: 173 RHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEQAGANTP 227
>gi|12957703|gb|AAK09221.1|AC084320_8 putative phytochrome interacting factor [Oryza sativa Japonica
Group]
Length = 263
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 20 EDSASHGRSENQDEDHETKTG-RSHSSKRR-RTAAVHNQSERRRRDRINQKMKALQKLVP 77
EDS S + ETK+ R + SKRR R A VHN SERRRRDRIN+KM+ALQ+L+P
Sbjct: 189 EDSDSRSEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIP 248
Query: 78 NASK 81
+ +K
Sbjct: 249 HCNK 252
>gi|357517063|ref|XP_003628820.1| Transcription factor MYC2 [Medicago truncatula]
gi|355522842|gb|AET03296.1| Transcription factor MYC2 [Medicago truncatula]
Length = 648
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 44/59 (74%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQK AL+ +VPN SK DKAS+L + I Y+ +LK+++Q + + + +
Sbjct: 463 HVEAERQRREKLNQKFYALRAVVPNGSKMDKASLLGDAISYINELKSKLQGLESSKGEL 521
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD SA S+N K H RR A H+ +ER RR++I+++M
Sbjct: 93 SLRTEVETDSRSAGKAVSKNIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 152
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 153 KVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLS 190
>gi|47232560|dbj|BAD18983.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
gi|47232562|dbj|BAD18984.1| bHLH transcription activator Ivory seed [Ipomoea tricolor]
Length = 670
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ +VQ + R N
Sbjct: 473 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRVQELEAARGNPS 532
Query: 114 QMNMMMPLG---MQQQLQMSLLARMGMGVGL 141
+++ G + Q S +R MG GL
Sbjct: 533 EVDRQSITGGVTRKNPAQKSGASRTQMGPGL 563
>gi|356571248|ref|XP_003553791.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 619
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 21 DSASHGRSENQ----DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
D + R E Q DE K GR ++ R H ++ER+RR+++NQ+ AL+ +V
Sbjct: 402 DVEASCREEQQPSFADERKPRKRGRKPANGRE-APLNHVEAERQRREKLNQRFYALRSVV 460
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMM 105
PN SK DKAS+L + I Y+ +L+A+V++M
Sbjct: 461 PNISKMDKASLLGDAIAYINELQAKVRIM 489
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE +YL+ LK+Q+
Sbjct: 360 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 419
Query: 103 QMMNNV-RNNMPQMNM 117
+ + + R N P M
Sbjct: 420 RELQTLDRRNYPNAAM 435
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP +K T KA MLDE+I+Y+
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 218 QSLQKQVEFLS 228
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
+ TT + + G+ ++Q D + ++R + H+ +ER RR++I+++M+ LQ
Sbjct: 313 SSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQD 372
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
LVP SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 373 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 404
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGRS------HSSKRRRTAA-VHNQSERRRRD 63
+ L T +++ SHG + ++ + H RR A H+ +ER RR+
Sbjct: 219 RKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRRE 278
Query: 64 RINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 279 KISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLS 322
>gi|50252324|dbj|BAD28357.1| DNA binding protein-like [Oryza sativa Japonica Group]
Length = 363
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q
Sbjct: 110 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 157
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGRS------HSSKRRRTAA-VHNQSERRRRD 63
+ L T +++ SHG + ++ + H RR A H+ +ER RR+
Sbjct: 239 RKLSTDAARDEAGSHGNGKGKEVAPAAEPEPQPPKDYIHVRARRGQATDSHSLAERVRRE 298
Query: 64 RINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 299 KISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQVEFLS 342
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 34 DHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEV 91
+ E TG H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+
Sbjct: 143 NEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEI 202
Query: 92 IDYLKQLKAQVQMM 105
I+Y++ L+ QV+ +
Sbjct: 203 INYVQSLQNQVEFL 216
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K+L+ QV++
Sbjct: 322 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKV 381
Query: 105 MNNVRNNM 112
+N+ R++
Sbjct: 382 LNDSRSSC 389
>gi|224082760|ref|XP_002306828.1| predicted protein [Populus trichocarpa]
gi|222856277|gb|EEE93824.1| predicted protein [Populus trichocarpa]
Length = 466
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
+TD+D S DE K GR ++ R H ++ER+RR+++NQ+ AL+ +V
Sbjct: 286 STDQDYPKDDLSPQGDERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVV 344
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMMNN----VRNNMPQM 115
PN SK DKAS+L + I ++ L+ +++++ V NN Q+
Sbjct: 345 PNISKMDKASLLGDAITFITDLQKKIRVLETERGVVNNNQKQL 387
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE +YL+ LK+Q+
Sbjct: 376 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 435
Query: 103 QMMNNV-RNNMPQMNMMM 119
+ + + R N P M +
Sbjct: 436 RELQTLDRRNYPNAAMSI 453
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K+L+ QV++
Sbjct: 321 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKV 380
Query: 105 MNNVRNNM 112
+N+ R++
Sbjct: 381 LNDSRSSC 388
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE +YL+ LK+Q+
Sbjct: 364 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 423
Query: 103 QMMNNV-RNNMPQMNM 117
+ + + R N P M
Sbjct: 424 RELQTLDRRNYPNAAM 439
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 24 SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
S G SENQ D+ H RR A H+ +ER RR++I++KMK LQ +VP +K
Sbjct: 171 SKGASENQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKV 224
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 225 TGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|89274228|gb|ABD65632.1| basic helix-loop-helix (bHLH) family transcription factor [Brassica
oleracea]
Length = 586
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 6 SYESLKSLKTKTTDED----------SASHGRSENQDEDHETKTGRSHSSKRRRTAAVHN 55
S+ S+ L TK+ D + A GR + E K GR ++ R H
Sbjct: 359 SFTSVLPLPTKSNDSNRSDLEASVVKEAESGRIVAETEKKPRKRGRKPANGREEPLN-HV 417
Query: 56 QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LKA++Q
Sbjct: 418 EAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKAKLQ 465
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 24 SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
S G SENQ D+ H RR A H+ +ER RR++I++KMK LQ +VP +K
Sbjct: 171 SKGASENQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKV 224
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 225 TGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQ 73
T TT + + ++ ED+ H RR A H+ +ER RR++I+++MK LQ
Sbjct: 218 TTTTGKSKGKGAKESSEKEDY------IHVRARRGQATNSHSLAERLRREKISERMKLLQ 271
Query: 74 KLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 272 DLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 305
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 24 SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
S G SENQ D+ H RR A H+ +ER RR++I++KMK LQ +VP +K
Sbjct: 154 SKGASENQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKV 207
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 208 TGKAGMLDEIINYVQCLQRQVEFLS 232
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+R++ +++ LQKLVP SK D ASMLDE YLK LK+QVQ + +
Sbjct: 291 RLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLKSQVQALETL 340
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDED-HETKTGRSHSSKRRRTAA-VHNQSERRRRD 63
S +L S +K + + G+ E D E G H RR A H+ +ER RR+
Sbjct: 86 SSATLSSAHSKDCKDGKSRRGKREKSSTDQEEAPKGYIHVRARRGQATDSHSLAERVRRE 145
Query: 64 RINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
RI+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 146 RISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 189
>gi|328687903|gb|AEB35563.1| MYC2 [Lactuca perennis]
gi|328687905|gb|AEB35564.1| MYC2 [Lactuca perennis]
Length = 318
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 164 SRESKISDEAPAIDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 222
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R + P++ +
Sbjct: 223 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESERQSGPRLEKI 272
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 34 DHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEV 91
+ E TG H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+
Sbjct: 154 NEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEI 213
Query: 92 IDYLKQLKAQVQMM 105
I+Y++ L+ QV+ +
Sbjct: 214 INYVQSLQNQVEFL 227
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 24 SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
S G SENQ D+ H RR A H+ +ER RR++I++KMK LQ +VP +K
Sbjct: 171 SKGASENQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKV 224
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 225 TGKAGMLDEIINYVQCLQRQVEFLS 249
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
R RR+R++ +++ LQKLVP SK D ASMLDE YLK L++QVQ + +M
Sbjct: 294 RLRRERVSDRLRVLQKLVPGGSKMDTASMLDEAASYLKFLRSQVQALETGNGSM 347
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%), Gaps = 9/105 (8%)
Query: 11 KSLKTKTTDEDSA------SHGRSENQD-EDHETKTGRSHSSKRRRTAA-VHNQSERRRR 62
+S+++K E+S+ + GRS+ + ++ K H RR A H+ +ER RR
Sbjct: 201 ESVQSKDKGEESSPATGTTTGGRSKGKGAKEGSEKEDYIHVRARRGQATNSHSLAERLRR 260
Query: 63 DRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 261 EKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 305
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++INQ+MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 298 ARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQVE 357
Query: 104 MM 105
+
Sbjct: 358 FL 359
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
+++ HG+ Q D + ++R + H+ +ER RR++I+++MK LQ LVP
Sbjct: 279 KNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 338
Query: 80 SK-TDKASMLDEVIDYLKQLKAQVQMM 105
SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 339 SKVTGKAVMLDEIINYVQSLQRQVEFL 365
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
E+Q ED+ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 248 ESQKEDY------IHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAV 301
Query: 87 MLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 302 MLDEIINYVQSLQRQVEFLS 321
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K+L+ QV++
Sbjct: 300 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVKV 359
Query: 105 MNNVRNNM 112
+N+ R++
Sbjct: 360 LNDSRSSC 367
>gi|28375728|dbj|BAC56998.1| F3G1 [Perilla frutescens]
Length = 519
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H +ERRRR+++NQ+ L+ +VP +K DKAS+L + IDYLKQLK ++Q + + +M
Sbjct: 364 HVMAERRRREKLNQRFIVLRSMVPFITKMDKASILADTIDYLKQLKKRIQELESKIGDMK 423
Query: 114 QMNMMM 119
+ + M
Sbjct: 424 KREIRM 429
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
+++ HG+ Q D + ++R + H+ +ER RR++I+++MK LQ LVP
Sbjct: 384 KNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 443
Query: 80 SK-TDKASMLDEVIDYLKQLKAQVQMMN 106
SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 444 SKVTGKAVMLDEIINYVQSLQRQVEFLS 471
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E TG H RR A H+ +ER RR++I+++MK LQ+LVP K T KA MLDE+I+
Sbjct: 164 EPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIIN 223
Query: 94 YLKQLKAQVQMMN 106
Y++ L+ QV+ ++
Sbjct: 224 YVQSLQNQVEFLS 236
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
E+Q ED+ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 237 ESQKEDY------IHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAV 290
Query: 87 MLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 291 MLDEIINYVQSLQRQVEFLS 310
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++ + N+
Sbjct: 141 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKRQIRLLQSTPNS 193
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 12/119 (10%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRINQKMKALQK 74
+ED+AS QD D + + + K R R AA QS R+RR+RIN+++K LQ
Sbjct: 250 EEDNAS------QDSDSKVSGVLNSNGKTRATRGAATDPQSLYARKRRERINERLKILQN 303
Query: 75 LVPNASKTDKASMLDEVIDYLKQLKAQVQMM--NNVRNNMPQMNMMMPLGMQQQLQMSL 131
LVPN +K D ++ML+E + Y+ L+ Q++++ +++ P + +G+ Q+L M L
Sbjct: 304 LVPNGTKVDISTMLEEAVHYVNFLQLQIKLLSSDDLWMYAPLAYNGIDIGLNQKLSMFL 362
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE +YL+ LK+Q+
Sbjct: 364 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQI 423
Query: 103 QMMNNV-RNNMPQMNM 117
+ + + R N P M
Sbjct: 424 RELQTLDRRNYPNAAM 439
>gi|224088258|ref|XP_002308393.1| predicted protein [Populus trichocarpa]
gi|222854369|gb|EEE91916.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 37/41 (90%)
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
MKALQ+LVPNA+KTDKASMLDE+IDY+K L+ QV++++ R
Sbjct: 1 MKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSR 41
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
E+Q ED+ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 247 ESQKEDY------IHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAV 300
Query: 87 MLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 301 MLDEIINYVQSLQRQVEFLS 320
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRI 65
LK KT +D D ++ G + ED E + + K R R AA QS R+RR+RI
Sbjct: 201 LKPQKTCCSD-DESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERI 259
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
N++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 260 NERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRI 65
LK KT +D D ++ G + ED E + + K R R AA QS R+RR+RI
Sbjct: 201 LKPQKTCCSD-DESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERI 259
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
N++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 260 NERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)
Query: 24 SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
S G SE+Q D+ H RR A H+ +ER RR++I++KMK LQ LVP +K
Sbjct: 173 SKGASESQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKV 226
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMN 106
T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 227 TGKAGMLDEIINYVQSLQRQVEFLS 251
>gi|297789910|ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arabidopsis lyrata subsp.
lyrata]
gi|297308638|gb|EFH39135.1| hypothetical protein ARALYDRAFT_497265 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H Q+E+RRRDRIN + AL+KLVPN+ K DKA++L VI+ +K+LK
Sbjct: 66 HRQAEKRRRDRINSHLTALRKLVPNSDKLDKAALLASVIEQVKELK 111
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ +R +A QS R RR++IN+++K LQ LVPN +K D +MLDE I Y+K L+ QV+
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVE 502
Query: 104 MM 105
++
Sbjct: 503 LL 504
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 28/133 (21%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRINQKMKAL 72
T+D+DS + S + TG K R R A+ QS R+RR+RIN+++K L
Sbjct: 193 TSDDDSNASQESAD--------TGVCPKGKARAARGASTDPQSLYARKRRERINERLKTL 244
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL 132
Q LVPN +K D ++ML+E + Y+K L+ Q++++++ M M P L
Sbjct: 245 QTLVPNGTKVDMSTMLEEAVHYVKFLQLQIKVLSS-----DDMWMYAP-----------L 288
Query: 133 ARMGMGVGLGTGM 145
A GM +GL M
Sbjct: 289 AYNGMNIGLDLNM 301
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 23 ASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK 81
++ G+ + + K G H RR A H+ +ER RR++I+++MK LQ LVP +K
Sbjct: 281 SNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNK 340
Query: 82 -TDKASMLDEVIDYLKQLKAQVQMM 105
T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 341 VTGKAVMLDEIINYVQSLQRQVEFL 365
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKA 85
SE+Q E++ H RR A H+ +ER RR++I+++MK LQ LVP SK T KA
Sbjct: 238 SESQKEEY------IHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKA 291
Query: 86 SMLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 292 VMLDEIINYVQSLQRQVEFLS 312
>gi|326503200|dbj|BAJ99225.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EV++++K+LK Q
Sbjct: 119 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVLEHVKELKRQ 166
>gi|414870451|tpg|DAA49008.1| TPA: putative HLH DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 267
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 38/48 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ER RR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q
Sbjct: 151 HSEAERSRRQRINGHLAKLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 198
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 255 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 314
Query: 104 MMNNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGM 145
++ + +N + L ++ L + G L G
Sbjct: 315 FLS---MKLASVNPTLDLNIESILSKDIFQSRGTTASLAFGF 353
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 3 TWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRR 61
+++S S S ++T + RS + ++ E K G H RR A H+ +ER R
Sbjct: 69 SFSSAHSKDSNSKESTKKKGGKRDRSSKEVDEEEPK-GYIHVRARRGQATDSHSLAERVR 127
Query: 62 RDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
R+RI+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 128 RERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 173
>gi|413932893|gb|AFW67444.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 387
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 65 INQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQ 124
I +KM+ALQ+L+P+ +KTDKAS+LDE I+YLK L+ QVQ+M +P M+ P Q
Sbjct: 205 IKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMVP---MVFPGAHQ 261
Query: 125 QQLQMSL 131
M+L
Sbjct: 262 YMPPMAL 268
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP K T KA MLDE+I+Y+
Sbjct: 144 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYV 203
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 204 QSLQKQVEFLS 214
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 23 ASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK 81
++ G+ + + K G H RR A H+ +ER RR++I+++MK LQ LVP +K
Sbjct: 282 SNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNK 341
Query: 82 -TDKASMLDEVIDYLKQLKAQVQMM 105
T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 342 VTGKAVMLDEIINYVQSLQRQVEFL 366
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRI 65
S E +++ K ++ +S G +D H +KR + H+ +ER RR +I
Sbjct: 116 SLEENRTISPKMQSKEDSSDGDGTKEDYVH-------IRAKRGQATNSHSLAERLRRKKI 168
Query: 66 NQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 169 SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 209
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRI 65
S E +++ K ++ +S G +D H +KR + H+ +ER RR +I
Sbjct: 110 SLEENRTISPKMQSKEDSSDGDGTKEDYVH-------IRAKRGQATNSHSLAERLRRKKI 162
Query: 66 NQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 163 SERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFL 203
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 26 GRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TD 83
G+ + + K G H RR A H+ +ER RR++I+++MK LQ LVP +K T
Sbjct: 285 GKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTG 344
Query: 84 KASMLDEVIDYLKQLKAQVQMM 105
KA MLDE+I+Y++ L+ QV+ +
Sbjct: 345 KAVMLDEIINYVQSLQRQVEFL 366
>gi|20127009|gb|AAM10932.1|AF488559_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 590
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKR-------RRTAAVHNQSERRRRDRINQ 67
++ ++ +S G E D ++G + KR R A H ++ER+RR+++NQ
Sbjct: 388 SRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQ 447
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
+ AL+ +VPN SK DKAS+L + + Y+ +L A++++M R +
Sbjct: 448 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 10 LKSLKTKTTDEDSASHG-----RSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRD 63
+K+ +++ E+S G + N +DH K H RR A H+ +ER RR+
Sbjct: 403 VKAKAERSSSENSGDSGSPRAHKENNSSKDH-AKQDYIHVRARRGQATDSHSLAERVRRE 461
Query: 64 RINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 462 KISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLS 505
>gi|15223363|ref|NP_171634.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|145323702|ref|NP_001077440.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|334182212|ref|NP_001184883.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|75311402|sp|Q9LNJ5.1|BH013_ARATH RecName: Full=Transcription factor bHLH13; AltName: Full=Basic
helix-loop-helix protein 13; Short=AtbHLH13; Short=bHLH
13; AltName: Full=Transcription factor EN 39; AltName:
Full=bHLH transcription factor bHLH013
gi|9665138|gb|AAF97322.1|AC023628_3 Similar to transcription factors [Arabidopsis thaliana]
gi|18026974|gb|AAL55720.1|AF251698_1 putative transcription factor BHLH13 [Arabidopsis thaliana]
gi|19310467|gb|AAL84968.1| At1g01260/F6F3_25 [Arabidopsis thaliana]
gi|21539515|gb|AAM53310.1| transcription factor MYC7E, putative [Arabidopsis thaliana]
gi|28416465|gb|AAO42763.1| At1g01260/F6F3_25 [Arabidopsis thaliana]
gi|332189141|gb|AEE27262.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|332189142|gb|AEE27263.1| transcription factor bHLH13 [Arabidopsis thaliana]
gi|332189143|gb|AEE27264.1| transcription factor bHLH13 [Arabidopsis thaliana]
Length = 590
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKR-------RRTAAVHNQSERRRRDRINQ 67
++ ++ +S G E D ++G + KR R A H ++ER+RR+++NQ
Sbjct: 388 SRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQ 447
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
+ AL+ +VPN SK DKAS+L + + Y+ +L A++++M R +
Sbjct: 448 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 250 ARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 309
Query: 104 MMN 106
++
Sbjct: 310 FLS 312
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
+++ ++ + T ++D AS E + + + + +S+ R A HN +E+RRR +I +
Sbjct: 41 DNMPAVASPTMNKDEASDDSGERKKKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITE 100
Query: 68 KMKALQKLVPNA-SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQ 126
+ + LQ+LVP +K+++AS LD+ I Y+K L+ Q++ + V + P ++ P + Q
Sbjct: 101 RFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEATSAVGS--PAAAVLYPAAVHPQ 158
Query: 127 LQM 129
M
Sbjct: 159 SYM 161
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV--RNNMPQ 114
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++ ++ +N PQ
Sbjct: 140 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQSSNPPQ 197
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 13 LKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKA 71
+K K + E SA + ENQ KT H RR A H+ +ER RR++I++KMK
Sbjct: 7 VKEKGSPEISADSSK-ENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKC 65
Query: 72 LQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LQ LVP +K T +A MLDE+I+Y++ L+ QV+ ++
Sbjct: 66 LQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFIS 101
>gi|384248401|gb|EIE21885.1| hypothetical protein COCSUDRAFT_56332 [Coccomyxa subellipsoidea
C-169]
Length = 1579
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHE-----TKTGRSHSSKRRRTAAVHNQSERRRRD 63
S++ L++ + D+ +H +QD D E KTG S+ ++ H Q+E+RRRD
Sbjct: 15 SVRELESMSRDDVRNNH---SDQDLDLERCAKVPKTG----SEPVKSGLRHVQTEQRRRD 67
Query: 64 RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
RIN+ AL+ L+P K DKA+ L+ ++Y+KQL+ +Q +
Sbjct: 68 RINEGFAALKALMPGQEKMDKATFLNSTVEYIKQLQGVMQQL 109
>gi|194695980|gb|ACF82074.1| unknown [Zea mays]
gi|413939375|gb|AFW73926.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 216
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
MKALQ L+PN+SKTDKASMLD+ I+YLK L+ QVQM+ ++RN +
Sbjct: 1 MKALQTLIPNSSKTDKASMLDDAIEYLKHLQLQVQML-SMRNGL 43
>gi|33339705|gb|AAQ14332.1|AF283507_1 MYC2 [Catharanthus roseus]
Length = 699
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA++Q
Sbjct: 517 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKAKLQ 566
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 67/106 (63%), Gaps = 7/106 (6%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 267 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 326
Query: 104 MMN-NVRNNMPQMNMMMPLGMQQQLQMSLL-ARMGMGVGLGTGMGM 147
++ + P++N + +++ L +L +R G LG G GM
Sbjct: 327 FLSMKLATVNPELN----IDIERLLSKDILNSRGGSTSVLGFGPGM 368
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E TG H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+
Sbjct: 163 EPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIIN 222
Query: 94 YLKQLKAQVQMMN 106
Y++ L+ QV+ ++
Sbjct: 223 YVQSLQNQVEFLS 235
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR+RI+++M+ LQ+LVP +K T KA MLDE+I+Y+
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYV 217
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 218 QSLQKQVEFLS 228
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 26 GRSEN----QDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNAS 80
G EN ++E E H RR A H+ +ER RR++I ++MK LQ LVP+ +
Sbjct: 236 GNDENAGAVEEEKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCN 295
Query: 81 K-TDKASMLDEVIDYLKQLKAQVQMMNNVRNNM-PQMNM 117
K T KA MLDE+I+Y++ L+ QV+ ++ + M PQ+ +
Sbjct: 296 KITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQLEL 334
>gi|238908347|emb|CAZ40332.1| putative transcription factor [Raphanus sativus]
Length = 645
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 52 AVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR-N 110
A H SER+RR+++N + L+ ++P+ SKTDK S+LD+ I+YL++L+ +VQ + + R +
Sbjct: 445 ANHALSERKRREKLNDRFITLRSMIPSISKTDKVSILDDTIEYLQELQRRVQELESCRES 504
Query: 111 NMPQMNMMM 119
+ +M M M
Sbjct: 505 DGKEMRMAM 513
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 13 LKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKA 71
+K K++ SA + ENQ KT H RR A H+ +ER RR++I++KMK+
Sbjct: 172 VKEKSSIGISADFSK-ENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKS 230
Query: 72 LQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
LQ LVP +K T +A MLDE+I+Y++ L+ QV+ +
Sbjct: 231 LQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFL 265
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ +R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K+L+ QV
Sbjct: 308 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQV 367
Query: 103 QMMNNVR 109
+++N R
Sbjct: 368 KVINESR 374
>gi|296278595|gb|ADH04262.1| bHLH1 transcription factor [Nicotiana benthamiana]
Length = 680
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q R N+
Sbjct: 501 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQNTETDRENL 559
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y+
Sbjct: 185 KTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 244
Query: 96 KQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLAR-----MGMGVGLGTGMGMLD 149
+ L+ QV+ ++ + P+++ + ++++ + A MGM GL + L
Sbjct: 245 QSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYLQ 304
Query: 150 MNT 152
N+
Sbjct: 305 FNS 307
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 12 SLKTKTTDEDSAS--HGRSENQDEDHETKTGRSHSSKRRRT--AAVHNQS--ERRRRDRI 65
S ++ T DE + + G+S + D E + S K R T A QS R+RR++I
Sbjct: 130 SSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKI 189
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---G 122
N+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ + M PL G
Sbjct: 190 NERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPLAYNG 244
Query: 123 MQQQLQMSLLARM 135
+ +LL+R+
Sbjct: 245 LDMGFHHNLLSRL 257
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++ ++
Sbjct: 153 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSI 202
>gi|163311848|gb|ABY26937.1| putative anthocyanin transcriptional regulator [Ipomoea
hochstetteri]
Length = 683
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%)
Query: 52 AVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
A H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R N
Sbjct: 484 ANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGN 543
Query: 112 MPQMN 116
+++
Sbjct: 544 PSEVD 548
>gi|45421752|emb|CAF74711.1| MYC transcription factor [Solanum tuberosum]
Length = 646
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK++VQ
Sbjct: 474 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVQ 523
>gi|222641559|gb|EEE69691.1| hypothetical protein OsJ_29328 [Oryza sativa Japonica Group]
Length = 214
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ERRRR RIN + L+ L+PN +KTDKAS+L EVI+++K+LK Q
Sbjct: 12 HSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQ 59
>gi|312282875|dbj|BAJ34303.1| unnamed protein product [Thellungiella halophila]
Length = 615
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
ED E K G A H SER+RR+++N + L+ ++P+ SK DK S+LD+ I
Sbjct: 413 EDSEFKVGDE--------TANHAFSERKRREKLNDRFMTLRSIIPSISKIDKVSILDDTI 464
Query: 93 DYLKQLKAQVQMMNNVR 109
+YL++L+ +VQ + + R
Sbjct: 465 EYLQELQRRVQELESCR 481
>gi|226425257|gb|ACO53628.1| bHLH domain protein [Gossypium hirsutum]
Length = 674
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQK AL+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 500 HVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQ 549
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
Query: 16 KTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQK 74
K T+E S++ DED +K G H RR A H+ +ER RR+RI+++M+ LQ
Sbjct: 111 KETEEKSST-------DEDEASK-GYIHVRARRGQATDSHSLAERVRRERISERMRMLQA 162
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 163 LVPGCDKVTGKAMVLDEIINYVQSLQNQVEFLS 195
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y+
Sbjct: 185 KTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYV 244
Query: 96 KQLKAQVQMMN-NVRNNMPQMNMMMPLGMQQQLQMSLLAR-----MGMGVGLGTGMGMLD 149
+ L+ QV+ ++ + P+++ + ++++ + A MGM GL + L
Sbjct: 245 QSLQKQVEFLSMKLATVNPRLDFNIDDLFEKEVFPNCDANASFQAMGMSTGLNSNNPYLQ 304
Query: 150 MNT 152
N+
Sbjct: 305 FNS 307
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 14 KTKTTDEDSAS--HGRSENQDEDHETKTGRSHSSKRRRT--AAVHNQS--ERRRRDRINQ 67
++ T DE + + G+S + D E + S K R T A QS R+RR++IN+
Sbjct: 132 ESNTVDESNTNWIDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKINE 191
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---GMQ 124
++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ + M PL G+
Sbjct: 192 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPLAYNGLD 246
Query: 125 QQLQMSLLARM 135
+LL+R+
Sbjct: 247 MGFHHNLLSRL 257
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR +I+++++ LQ+LVPN K T+ A MLD +DY+K L+ QV++
Sbjct: 163 KRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKV 222
Query: 105 MNNVRNNM 112
+N+ R N
Sbjct: 223 LNDGRANC 230
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSK------------RRRTAAV--HN 55
KS+ + +E+S +++ E+ K G+ +SK RR A H+
Sbjct: 217 CKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHS 276
Query: 56 QSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 277 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 328
>gi|1142621|gb|AAC28907.1| phaseolin G-box binding protein PG2, partial [Phaseolus vulgaris]
Length = 614
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 11/75 (14%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++Q + + ++
Sbjct: 435 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQNLESDKD--- 491
Query: 114 QMNMMMPLGMQQQLQ 128
G+Q+QL+
Sbjct: 492 --------GLQKQLE 498
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 104 MMN 106
++
Sbjct: 256 FLS 258
>gi|357150524|ref|XP_003575488.1| PREDICTED: transcription factor bHLH84-like [Brachypodium
distachyon]
Length = 178
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 63/103 (61%), Gaps = 11/103 (10%)
Query: 30 NQDEDHETKTGRSHSSKRRR----TAAVHNQSE--RRRRDRINQKMKALQKLVPNASKTD 83
+Q+ DH+ + + S+ R+ AA +QS ++RR RIN++++ LQKL+PN +K D
Sbjct: 76 DQERDHDNEVHAALSAPRKNGKKSRAAKDSQSHYAKKRRQRINERLRILQKLIPNGTKVD 135
Query: 84 KASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQ 126
++ML+E + Y+K L Q++++++ +M M PL Q+
Sbjct: 136 ISTMLEEAVQYVKFLHLQIKLLSS-----DEMWMYAPLACNQE 173
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 120 AKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 179
Query: 104 MM 105
+
Sbjct: 180 FL 181
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 12 SLKTKTTDEDSASHGRSENQD---EDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQ 67
S K K +S + G+ + +D + E H RR A H+ +ER RR++I+Q
Sbjct: 245 STKGKAAQSNSENGGKKQGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQ 304
Query: 68 KMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 305 RMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 344
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 32 DEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASM 87
++D+ +K+ + + K R R +A QS R+RR+RIN++++ LQ LVPN +K D ++M
Sbjct: 249 EDDNTSKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTM 308
Query: 88 LDEVIDYLKQLKAQVQMM 105
L+E ++Y+K L+ Q++++
Sbjct: 309 LEEAVNYVKFLQLQIKLL 326
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
K G H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y+
Sbjct: 297 KDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYV 356
Query: 96 KQLKAQVQMM 105
+ L+ QV+ +
Sbjct: 357 QSLQRQVEFL 366
>gi|193734712|gb|ACF19982.1| MYC2 [Hevea brasiliensis]
Length = 476
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 34 DHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVID 93
D K GR+ + + T H ++ER+RR+R+N + AL+ +VPN SK DKAS+L + +
Sbjct: 288 DRLKKRGRTQLNGKELTLN-HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVT 346
Query: 94 YLKQLKAQV 102
Y+K+LKA+V
Sbjct: 347 YIKELKAKV 355
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 17 TTDEDSASH----GRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMK 70
+ DE +ASH G S + S ++ R AA QS R+RR+RIN++++
Sbjct: 232 SEDESNASHELNRGASSSLSSKGTATLNSSGKTRASRGAATDPQSLYARKRRERINERLR 291
Query: 71 ALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 292 ILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 326
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++++K LQ+LVP +K D ASMLDE I Y+K LK QVQ +
Sbjct: 146 RHRRERISERIKILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTL 192
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 23/129 (17%)
Query: 1 MMTWASYESLKSLKTKTTDEDSAS----HGRSE----NQDEDHETKTGRSHSSK------ 46
M T A+ E + K+T+E +A+ G+ + N + K G+ SSK
Sbjct: 213 MSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPK 272
Query: 47 ------RRRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQ 97
RR A H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++
Sbjct: 273 DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQS 332
Query: 98 LKAQVQMMN 106
L+ QV+ ++
Sbjct: 333 LQRQVEFLS 341
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSK------------RRRTAAV--HN 55
KS+ + +E+S +++ E+ K G+ +SK RR A H+
Sbjct: 217 CKSMSMEDGEENSGKGKAAQSSSENGGKKQGKDGASKLPEPPKDFIHVRARRGEATDSHS 276
Query: 56 QSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 277 LAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLS 328
>gi|357130303|ref|XP_003566789.1| PREDICTED: uncharacterized protein LOC100831535 [Brachypodium
distachyon]
Length = 455
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 32 DEDHETKTGRSHSSKRRR---TAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASML 88
DED E R+ + RR ++ + R+RR+RI+++++ LQ+LVP +K D ASML
Sbjct: 322 DEDTE----RAPAPGRRNVRISSDPQTVAARQRRERISERLRVLQRLVPGGAKMDTASML 377
Query: 89 DEVIDYLKQLKAQVQMMNNV-RNNMP 113
DE YL+ LKAQ++ + + R N P
Sbjct: 378 DEAASYLRFLKAQIRDLQTLDRRNYP 403
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRIN 66
E K K + + +A+ SE Q D K G H RR A H+ +ER RR++I+
Sbjct: 188 EEDKKQKDEQSPTSNANKTNSEKQPSD-SLKDGYIHMRARRGQATNSHSLAERVRREKIS 246
Query: 67 QKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
++MK LQ LVP K T KA MLDE+I+Y++ L+ Q++ +
Sbjct: 247 ERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286
>gi|224082622|ref|XP_002306769.1| predicted protein [Populus trichocarpa]
gi|222856218|gb|EEE93765.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 77/137 (56%), Gaps = 12/137 (8%)
Query: 25 HGRSENQDEDHETKTGRSHSSKRRRT-----AAVHNQSERRRRDRINQKMKALQKLVPNA 79
H +S +D +++ G + S R+ T +A H +ERRRR+++N++ L+ LVP
Sbjct: 338 HSKS-REDNSPKSRDGEAASRFRKGTPQDELSANHVLAERRRREKLNERFIMLRSLVPFV 396
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL---ARMG 136
+K DKAS+L + I+Y+KQL+ ++Q + M + P ++ +++S++ A +
Sbjct: 397 TKMDKASILGDTIEYVKQLRQKIQDLETRNKQM--ESEQRPRSLETSVEVSIIESDALLE 454
Query: 137 MGVGLGTGMGMLDMNTM 153
+ G G+ +LD+ M
Sbjct: 455 LECGFREGL-LLDIMQM 470
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
R RR+RI+QK++ LQ+LVP +K D ASMLDE + Y+K LK QVQ +
Sbjct: 122 RHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQTLE 169
>gi|222424906|dbj|BAH20404.1| AT1G01260 [Arabidopsis thaliana]
Length = 427
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKR-------RRTAAVHNQSERRRRDRINQ 67
++ ++ +S G E D ++G + KR R A H ++ER+RR+++NQ
Sbjct: 225 SRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQ 284
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
+ AL+ +VPN SK DKAS+L + + Y+ +L A++++M R +
Sbjct: 285 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 329
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
+E+S+ E DE H K ++R + H+ +ER RR++I+++MK LQ LVP
Sbjct: 88 EENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPG 147
Query: 79 ASKT-DKASMLDEVIDYLKQLKAQVQMMN------NVRNNMPQMNMMMPLGMQQQ 126
+K KA +LDE+I+Y++ L QV+ ++ N R P M + P QQ
Sbjct: 148 CNKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSR-PTPGMEVFPPKTFDQQ 201
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++ ++
Sbjct: 145 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSI 194
>gi|334200172|gb|AEG74013.1| lMYC3 [Hevea brasiliensis]
Length = 475
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ +VPN SK DKAS+L + + Y+K+LKA+V
Sbjct: 301 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKV 349
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 262 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 321
Query: 104 MM 105
+
Sbjct: 322 FL 323
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 113 ARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVE 172
Query: 104 MMNNVRNNM-PQMNM 117
++ M PQ++
Sbjct: 173 FLSMKLATMNPQLDF 187
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I ++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 258 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 317
Query: 104 MMN 106
++
Sbjct: 318 FLS 320
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 104 MMN 106
++
Sbjct: 256 FLS 258
>gi|255559983|ref|XP_002521010.1| DNA binding protein, putative [Ricinus communis]
gi|223539847|gb|EEF41427.1| DNA binding protein, putative [Ricinus communis]
Length = 503
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
S +Q+E K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+
Sbjct: 333 SPHQNERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASL 391
Query: 88 LDEVIDYLKQLKAQV-------QMMNNVRNNMP 113
L + I Y+ L+ ++ +M NN +N P
Sbjct: 392 LGDAITYITDLQTKIRVLETEKEMSNNNQNQFP 424
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 260 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 319
Query: 104 MM 105
+
Sbjct: 320 FL 321
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++ + N Q ++
Sbjct: 130 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIKLLQSTPQNQQQQHIQ 189
Query: 119 MPLGMQ 124
+PL Q
Sbjct: 190 LPLSSQ 195
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD +AS +N K H RR A H+ +ER RR++I+++M
Sbjct: 103 SLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 162
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 163 KILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 200
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 196 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 255
Query: 104 MMN 106
++
Sbjct: 256 FLS 258
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ RR +A QS R RR++IN+++K LQ LVPN +K D +MLDE I Y++ L+ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVDIVTMLDEAIHYVQFLQLQVT 502
Query: 104 MM 105
++
Sbjct: 503 LL 504
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 11/95 (11%)
Query: 21 DSASHGRSENQDEDHETKTGRSHSSKRR------RTAAVHNQS--ERRRRDRINQKMKAL 72
D+ S ++D + E G ++SS ++ R AA QS R+RR+RIN++++ L
Sbjct: 163 DTQSSSSCTSEDGNFE---GNTNSSTKKAYTRASRGAATDPQSLYARKRRERINERLRIL 219
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
QKLVPN +K D ++ML+E Y+K L+ Q++++++
Sbjct: 220 QKLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLSS 254
>gi|172034194|gb|ACB69502.1| ICE87 [Triticum aestivum]
Length = 443
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 26 GRSE-NQDEDHETKTGRS---HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK 81
GR + N+ + T TG + ++K++ A + +ERRRR ++N ++ AL+ +VP SK
Sbjct: 226 GRKDGNESNANSTVTGGATAEGNAKKKGMPAKNLMAERRRRKKLNDRLYALRSVVPRISK 285
Query: 82 TDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
D+AS+L + I+YLK+LK ++ ++ N P + + P
Sbjct: 286 MDRASILGDAIEYLKELKQKINVLQNELEASPSASSLPP 324
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E G H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 94 YLKQLKAQVQMMN 106
Y++ L+ QV+ ++
Sbjct: 232 YVQSLQNQVEFLS 244
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I++KMK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 192 ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251
Query: 104 MMN 106
++
Sbjct: 252 FLS 254
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 262 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 321
Query: 104 MM 105
+
Sbjct: 322 FL 323
>gi|192766596|gb|ACF05947.1| MYC1 [Hevea brasiliensis]
Length = 476
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ +VPN SK DKAS+L + + Y+K+LKA+V
Sbjct: 307 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELKAKV 355
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I++KMK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 192 ARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 251
Query: 104 MMN 106
++
Sbjct: 252 FLS 254
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+R++ +++ LQKLVP +K D ASMLDE YLK LK+QVQ + +
Sbjct: 291 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETL 340
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD +AS +N K H RR A H+ +ER RR++I+++M
Sbjct: 103 SLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 162
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 163 KILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 200
>gi|356531417|ref|XP_003534274.1| PREDICTED: transcription factor ATR2-like [Glycine max]
Length = 658
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++Q +
Sbjct: 477 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTL 528
>gi|312283103|dbj|BAJ34417.1| unnamed protein product [Thellungiella halophila]
Length = 597
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKR-------RRTAAVHNQSERRRRDRINQ 67
++ + +S G +E D ++G + KR R A H ++ER+RR+++NQ
Sbjct: 395 SRAPENNSDGEGGAEWADVVGGDESGNNKPRKRGRRPANGRAEALNHVEAERQRREKLNQ 454
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
+ AL+ +VPN SK DKAS+L + + Y+ +L A++++M R +
Sbjct: 455 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 499
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD +AS +N K H RR A H+ +ER RR++I+++M
Sbjct: 101 SLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 160
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 161 KILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 198
>gi|401782370|dbj|BAM36702.1| bHLH transcriptional factor AN1 homolog [Rosa hybrid cultivar]
Length = 702
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S +S + D + G S +A H +ERRRR+++N++
Sbjct: 440 SVPFLHTKYRDENSP---KSHDVDGSSRLRKGTSQD----ELSANHVLAERRRREKLNER 492
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
L+ LVP +K DKAS+L + I+Y+KQL+ ++Q
Sbjct: 493 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 527
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 370 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 429
Query: 104 MMN 106
++
Sbjct: 430 FLS 432
>gi|300827231|gb|ADK36627.1| Rc protein [Oryza meridionalis]
Length = 672
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ +A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 465 ETPESRGGKGASGTRKVSAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 524
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 525 ILGDTIEYVKQLRNRIQ 541
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 41/54 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
R+RR+RI+ +++ LQK+VP SK D ASMLDE +YLK L++QV+ + ++ N +
Sbjct: 401 RQRRERISDRIRVLQKIVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKV 454
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R +A QS R+RR+RIN+++K LQ LVPN +K D ++ML+E ++Y+K L+ Q++++
Sbjct: 263 RGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 321
>gi|388519171|gb|AFK47647.1| unknown [Lotus japonicus]
Length = 234
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 44 SSKRRRTAAV--HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
+S+ RR +A H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L VID +K LK +
Sbjct: 42 ASEERRISASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDKVKDLKRK 101
Query: 102 VQMMNNV 108
++ V
Sbjct: 102 AMEVSRV 108
>gi|328688091|gb|AEB35657.1| MYC2 [Helianthus annuus]
Length = 155
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEANKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGML--------DMNTMAAAA 157
+RN + + + + Q+ ++MS + G L + ++ N M+ A
Sbjct: 71 LRNQIDALKKELSNKVSAQENMKMSSITTRGPPADLDVDVKVIGWDAMIRVQCNKMSHPA 130
Query: 158 ATARTAPQSLPPPIYSPAASVT 179
A RTA L ++ + SV
Sbjct: 131 ARLRTAMMELDLEVHHASVSVV 152
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RI+ +++ LQ +VP SK D ASMLDE +YLK L++QV+ + N+ + + +N
Sbjct: 214 RQRRERISDRIRVLQGMVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGHKLDSVNCP 273
Query: 119 MPLGM 123
P +
Sbjct: 274 QPTNI 278
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 125 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 184
Query: 104 MM 105
+
Sbjct: 185 FL 186
>gi|449495155|ref|XP_004159750.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR ++NQ+ AL+ +VPN SK DKAS+L + +Y+K+LK++VQ +
Sbjct: 276 HVEAERQRRQKLNQRFYALRSVVPNVSKMDKASLLADAAEYIKELKSKVQKL 327
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKR-RRTAAVHNQS--ERRRRDRINQKMKALQ 73
D S+S SE+ + + T + + R R AA QS R+RR+RIN++++ LQ
Sbjct: 165 CVDTQSSSSCTSEDGNFEGNTNSSSKKTCARASRGAATEPQSLYARKRRERINERLRILQ 224
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
LVPN +K D ++ML+E Y+K L+ Q+++++
Sbjct: 225 NLVPNGTKVDISTMLEEAAQYVKFLQLQIKLLS 257
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E G H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIIS 231
Query: 94 YLKQLKAQVQMMN 106
Y++ L+ QV+ ++
Sbjct: 232 YVQSLQNQVEFLS 244
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQK 74
T T ++D AS E + + + + +S+ R A HN +E+RRR +I ++ + LQ+
Sbjct: 161 TTTMNKDEASDDSGERKKKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITERFRTLQR 220
Query: 75 LVPNA-SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQM 129
LVP +K+++AS LD+ I Y+K L+ Q++ + V + P ++ P + Q M
Sbjct: 221 LVPGCDNKSNQASTLDQTIQYMKSLQHQLEATSAVGS--PAAAVLYPAAVHPQSYM 274
>gi|449456931|ref|XP_004146202.1| PREDICTED: transcription factor MYC4-like [Cucumis sativus]
Length = 443
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR ++NQ+ AL+ +VPN SK DKAS+L + +Y+K+LK++VQ +
Sbjct: 276 HVEAERQRRQKLNQRFYALRSVVPNVSKMDKASLLADAAEYIKELKSKVQKL 327
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNA 79
S+S E E + + + ++ R AA QS R+RR+RIN++++ LQ LVPN
Sbjct: 164 SSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNG 223
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNN 107
+K D ++ML+E + Y+K L+ Q++++++
Sbjct: 224 TKVDISTMLEEAVQYVKFLQLQIKLLSS 251
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
R RR+R++ +++ LQKLVP +K D ASMLDE YLK LK+QVQ + +
Sbjct: 292 RLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETL 341
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNA 79
S+S E E + + + ++ R AA QS R+RR+RIN++++ LQ LVPN
Sbjct: 164 SSSCTSEEGNLEGNAKPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNG 223
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNN 107
+K D ++ML+E + Y+K L+ Q++++++
Sbjct: 224 TKVDISTMLEEAVQYVKFLQLQIKLLSS 251
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 251 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 310
Query: 104 MMN 106
++
Sbjct: 311 FLS 313
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R RR+RI+ +++ LQ VP +K D ASMLDE I Y+K L+ Q+Q + + NM
Sbjct: 398 RHRRERISDRVRVLQHFVPGGTKMDTASMLDEAIHYVKFLQQQLQTLERIG------NMS 451
Query: 119 MPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP 169
P M Q +L + VG T M D+N + A T +LPP
Sbjct: 452 DPRFMTQPGGPMILPQ----VGASTSMRPFDLNCAVYQSNPATT--MTLPP 496
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 319 ARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 378
Query: 104 MMN 106
++
Sbjct: 379 FLS 381
>gi|357468081|ref|XP_003604325.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355505380|gb|AES86522.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 331
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 27 RSENQDEDHETKTGRSHSSKRRRTAAV---HNQSERRRRDRINQKMKALQKLVPNASKTD 83
RS ++ E K + + KR R+++ H +ER+RR +++K AL +P SKTD
Sbjct: 123 RSHESNQKSEMKINQQNGVKRGRSSSQCIDHIMAERKRRQELSEKFIALSATIPGLSKTD 182
Query: 84 KASMLDEVIDYLKQLKAQV 102
KAS+L E IDY+KQLK +V
Sbjct: 183 KASILREAIDYVKQLKERV 201
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 9 SLKSLKTKTTDEDSASHG-RSENQDE-DHETKTGRSHSSKRRRTAA-VHNQSERRRRDRI 65
SL S +K E+ G + ++D+ + E G H RR A H+ +ER RR+RI
Sbjct: 70 SLNSAHSKEAKENGRKRGGKKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERI 129
Query: 66 NQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+++M+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 130 SERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 171
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 360 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 419
Query: 104 MM 105
+
Sbjct: 420 FL 421
>gi|300394152|gb|ADK11703.1| enhancer of glabra 3 [Brassica rapa subsp. rapa]
Length = 597
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 35 HETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDY 94
H+ T K A H SER+RR+++N + L+ ++P+ SK DK S+LD+ I+Y
Sbjct: 391 HQKDTPEDSGYKVGDETANHALSERKRREKLNDRFMTLRSMIPSISKIDKVSILDDTIEY 450
Query: 95 LKQLKAQVQMMNNVRNNM-PQMNMMM 119
L++L+ +VQ + + R + +M M M
Sbjct: 451 LQELQRRVQELESCRESTDTEMRMAM 476
>gi|168002647|ref|XP_001754025.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695001|gb|EDQ81347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 576
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H Q+ER+RR+++NQK AL+ +VPN SK DKAS+L++ I Y+ +L+ ++Q
Sbjct: 409 HVQAERQRREKLNQKFYALRSVVPNVSKMDKASLLEDAITYINELQEKLQ 458
>gi|255568283|ref|XP_002525116.1| conserved hypothetical protein [Ricinus communis]
gi|223535575|gb|EEF37243.1| conserved hypothetical protein [Ricinus communis]
Length = 265
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 39 TGRSHSSKRRRTAAV--HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
G+ S R T A+ H ++ER+RR RIN + L+ LVP A K DKAS+L EVI Y+K
Sbjct: 57 VGKKGVSAERSTQALRNHCEAERKRRARINAHLDTLRSLVPGAKKMDKASLLAEVIKYMK 116
Query: 97 QLK 99
+LK
Sbjct: 117 ELK 119
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR +I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 108 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVE 167
Query: 104 MMN 106
++
Sbjct: 168 FLS 170
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 126 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
Query: 104 MM 105
+
Sbjct: 186 FL 187
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR +I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 140 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVE 199
Query: 104 MMN 106
++
Sbjct: 200 FLS 202
>gi|356544676|ref|XP_003540773.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor FER-LIKE IRON
DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Glycine
max]
Length = 330
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 57 SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
SERRRRDR+ QK+ AL LVPN +K DKAS++ + + Y+ +L+AQ M+
Sbjct: 141 SERRRRDRMKQKLYALWSLVPNITKMDKASIIGDAVSYMHELQAQANML 189
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 195 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 254
Query: 104 MMN 106
++
Sbjct: 255 FLS 257
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVP 77
+E++ +H + ++ E H RR A H+ +ER RR++I+++MK LQ LVP
Sbjct: 2 EEENGNHKQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 61
Query: 78 NASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+K T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 62 GCNKVTGKAVMLDEIINYVQSLQRQVEFLS 91
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ RR A H +S ER RR RI++++K LQ LVPN K T+ + MLD +DY+K+LK QV
Sbjct: 281 RARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQV 340
Query: 103 QMMNNVRNNM 112
+ + + + N
Sbjct: 341 EKLKHDQANC 350
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++M+ LQ+LVPN K T+ + MLD +DY+K L+ Q ++
Sbjct: 303 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKI 362
Query: 105 MNNVRNNMPQMN 116
+N+ R N MN
Sbjct: 363 LNDNRANCKCMN 374
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+++MK LQ+LVP SK KAS LDE+I+Y++ L+ QV+
Sbjct: 134 ARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVE 193
Query: 104 MMN 106
++
Sbjct: 194 FLS 196
>gi|255557569|ref|XP_002519814.1| Transcription factor AtMYC2, putative [Ricinus communis]
gi|223540860|gb|EEF42418.1| Transcription factor AtMYC2, putative [Ricinus communis]
Length = 663
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+K+L+ ++Q
Sbjct: 486 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELRTKLQ 535
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++M+ LQ+LVPN K T+ + MLD +DY+K L+ Q ++
Sbjct: 282 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKI 341
Query: 105 MNNVRNNMPQMN 116
+N+ R N MN
Sbjct: 342 LNDNRANCKCMN 353
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ +R +A QS R RR+RIN+++K LQ LVPN +K D +ML+E I Y+K L+ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKVDIVTMLEEAIHYVKFLQLQVN 271
Query: 104 MM 105
M+
Sbjct: 272 ML 273
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++
Sbjct: 109 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 155
>gi|413947858|gb|AFW80507.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413947859|gb|AFW80508.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 611
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 458 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 517
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 518 ESGMVDP 524
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 406 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 465
Query: 104 MMN 106
++
Sbjct: 466 FLS 468
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 7/72 (9%)
Query: 38 KTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLK 96
+ R H++ R A ER RR +I+++MK LQ+LVPN+ + T+ A MLD+ ++Y+K
Sbjct: 380 RANRGHATHPRSIA------ERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVK 433
Query: 97 QLKAQVQMMNNV 108
QL+ QVQ + N
Sbjct: 434 QLQLQVQELTNT 445
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 33 EDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDE 90
ED TK G H RR A H+ +ER RR+RI+++M+ LQ LVP K T KA +LDE
Sbjct: 112 EDEATK-GYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDE 170
Query: 91 VIDYLKQLKAQVQMMN 106
+I+Y++ L+ QV+ ++
Sbjct: 171 IINYVQSLQNQVEFLS 186
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R +A QS R+RR+RIN+++K LQ LVPN +K D ++ML+E ++Y+K L+ Q++++
Sbjct: 259 RGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 317
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 16/100 (16%)
Query: 23 ASHGRSENQDEDH-ETKTGRSHSSK------------RRRTAAV--HNQSERRRRDRINQ 67
A RS + ED+ E K G+ ++K RR A H+ +ER RR+RI+Q
Sbjct: 155 AEQARSGSSVEDYGEPKKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQ 214
Query: 68 KMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 215 RMKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 254
>gi|297848392|ref|XP_002892077.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337919|gb|EFH68336.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 591
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRR-------TAAVHNQSERRRRDRINQ 67
++ ++ +S G E D G + KR R A H ++ER+RR+++NQ
Sbjct: 389 SRASENNSDGEGGGEWADAVGADDNGNNKPRKRGRRPANGRVEALNHVEAERQRREKLNQ 448
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
+ AL+ +VPN SK DKAS+L + + Y+ +L A++++M
Sbjct: 449 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVM 486
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++M+ LQ+LVPN K T+ + MLD +DY+K L+ Q ++
Sbjct: 282 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKI 341
Query: 105 MNNVRNNMPQMN 116
+N+ R N MN
Sbjct: 342 LNDNRANCKCMN 353
>gi|317016596|gb|ACT90640.2| inducer of CBF expression [Camellia sinensis]
Length = 518
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRI 65
+Y+S + ++ +E + G S N + T TG K+R A + +ERRRR ++
Sbjct: 288 NYDSDEFMENNKVEESGKNGGNSSNANS---TVTGGDQKGKKRGLPAKNLMAERRRRKKL 344
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
N ++ L+ +VP SK D+AS+L + I+YLK+L +++ +++ + P + + P
Sbjct: 345 NDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKIKDLHSELESNPPGSSLTP 399
>gi|308084333|gb|ADO13282.1| bHLH [Pisum sativum]
Length = 652
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 13 LKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
L TK DE S + + + + R + + +A H +ERRRR+++N++ L
Sbjct: 428 LHTKNHDETSPQTRDTAGVNSNDPSARLRGKGTPQDELSANHVLAERRRREKLNERFIIL 487
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ LVP +K DKAS+L + I+YLKQL+ ++Q
Sbjct: 488 RSLVPFVTKMDKASILGDTIEYLKQLRRKIQ 518
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE +YL+ LK+QV
Sbjct: 347 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQV 406
Query: 103 QMM 105
+ +
Sbjct: 407 REL 409
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R +A QS R+RR+RIN+++K LQ LVPN +K D ++ML+E ++Y+K L+ Q++++
Sbjct: 258 RGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLL 316
>gi|414875585|tpg|DAA52716.1| TPA: hypothetical protein ZEAMMB73_145518 [Zea mays]
Length = 616
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 462 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 521
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 522 ESGMVDP 528
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 126 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
Query: 104 MM 105
+
Sbjct: 186 FL 187
>gi|226502112|ref|NP_001146245.1| uncharacterized protein LOC100279818 [Zea mays]
gi|219886371|gb|ACL53560.1| unknown [Zea mays]
Length = 616
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 462 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 521
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 522 ESGMVDP 528
>gi|296278606|gb|ADH04267.1| MYC1a transcription factor [Nicotiana tabacum]
gi|316930969|gb|ADU60101.1| MYC2b transcription factor [Nicotiana tabacum]
gi|316930971|gb|ADU60102.1| MYC2c transcription factor [Nicotiana tabacum]
Length = 681
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q R ++
Sbjct: 502 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQTTETDREDL 560
>gi|89027224|gb|ABD59338.1| G-box element binding protein [Pisum sativum]
Length = 646
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 44/59 (74%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q + + ++ +
Sbjct: 470 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQGLESSKDEL 528
>gi|77556450|gb|ABA99246.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|218187186|gb|EEC69613.1| hypothetical protein OsI_38987 [Oryza sativa Indica Group]
gi|222617411|gb|EEE53543.1| hypothetical protein OsJ_36752 [Oryza sativa Japonica Group]
Length = 265
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
A H +E+RRR RIN+K K LQ+LVP K ++S LD I Y+K L+ Q+Q M
Sbjct: 154 AETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 104 MMN 106
++
Sbjct: 266 FLS 268
>gi|45421750|emb|CAF74710.1| MYC transcription factor [Solanum tuberosum]
Length = 692
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 518 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQ 567
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKA 85
SE Q D K G H RR A H+ +ER RR++I+++MK LQ LVP K T KA
Sbjct: 153 SEKQASD-SLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKA 211
Query: 86 SMLDEVIDYLKQLKAQVQMM 105
MLDE+I+Y++ L+ Q++ +
Sbjct: 212 VMLDEIINYVQSLQCQIEFL 231
>gi|13346180|gb|AAK19612.1|AF336279_1 GHDEL61 [Gossypium hirsutum]
Length = 624
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H SERRRR++IN+++ L+ LVP SK DK S+LD+ I+YL+ L+ +V+ + R
Sbjct: 425 HVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLERRVEELECCR 480
>gi|242051457|ref|XP_002454874.1| hypothetical protein SORBIDRAFT_03g000570 [Sorghum bicolor]
gi|241926849|gb|EER99993.1| hypothetical protein SORBIDRAFT_03g000570 [Sorghum bicolor]
Length = 622
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M + R +
Sbjct: 469 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMESERERLL 528
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 529 ESGMVDP 535
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E TG H RR A H+ +ER RR++I+++MK LQ+LVP + T KA +LDE+I+
Sbjct: 137 EVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIIN 196
Query: 94 YLKQLKAQVQMM 105
Y++ L+ QV+ +
Sbjct: 197 YVQSLQNQVEFL 208
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 8 ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQ 67
E + + K ++ +S G +D H +KR + H+ +ER RR +I++
Sbjct: 3 EGNRKISPKIQSKEDSSDGDGTKEDYVH-------IRAKRGQATNSHSLAERLRRKKISE 55
Query: 68 KMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 56 RMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLS 95
>gi|224135857|ref|XP_002327321.1| predicted protein [Populus trichocarpa]
gi|222835691|gb|EEE74126.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ER+RR RIN + L+ LVP SK DKAS+L EVI +LK+LK Q
Sbjct: 76 HSEAERKRRARINAHLDTLRSLVPGTSKMDKASLLAEVISHLKELKIQ 123
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+Y+
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225
Query: 96 KQLKAQVQMM 105
+ L+ Q++ +
Sbjct: 226 QSLQRQIEFL 235
>gi|328687927|gb|AEB35575.1| MYC2 [Helianthus exilis]
gi|328687929|gb|AEB35576.1| MYC2 [Helianthus exilis]
Length = 155
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
+RN + + + + +Q+ ++MS + G L + ++ + M ++ P
Sbjct: 71 LRNQIDALKKELSNKVSVQENMKMSCITTRGPPADLDVDVKVIGWDAMIRVQCNKKSHP 129
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+Y+
Sbjct: 163 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 222
Query: 96 KQLKAQVQMMN---NVRNNMPQMNM 117
+ L+ Q++ ++ V N P +M
Sbjct: 223 QSLQRQIEFLSMKLAVVNPRPDFDM 247
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E G H RR A H+ +ER RR+RI+++MK LQ LVP K T KA MLDE+I+
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIIN 225
Query: 94 YLKQLKAQVQMM 105
Y++ L+ QV+ +
Sbjct: 226 YVQSLQNQVEFL 237
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 31 QDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKAS 86
+D D + S S K R R AA QS R+RR+RIN+++K LQ +VPN +K D ++
Sbjct: 254 KDSDSKVSEVLSSSGKTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTKVDIST 313
Query: 87 MLDEVIDYLKQLKAQVQM 104
ML+E + Y+K L+ Q+++
Sbjct: 314 MLEEAVHYVKFLQLQIKV 331
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K L+ QV+
Sbjct: 325 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKG 384
Query: 105 MNNVRNN 111
+N+ R N
Sbjct: 385 LNDSRAN 391
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+Y+
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225
Query: 96 KQLKAQVQMM 105
+ L+ Q++ +
Sbjct: 226 QSLQRQIEFL 235
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 83 ARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVE 142
Query: 104 MMNNVRNNM-PQMNM 117
++ M PQ++
Sbjct: 143 FLSMKLATMNPQLDF 157
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 40/49 (81%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
R+RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++
Sbjct: 229 RKRRERINERLKVLQSLVPNGTKVDMSTMLEEAVHYVKFLQLQIRLLSS 277
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 100 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 159
Query: 104 MM 105
+
Sbjct: 160 FL 161
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 16 KTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQK 74
K DE+SA +++ + E H RR A H+ +ER RR++I+++MK LQ
Sbjct: 188 KKNDENSAEERQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQD 247
Query: 75 LVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
LVP +K T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 248 LVPGCNKVTGKALMLDEIINYVQSLQHQVEFL 279
>gi|356560147|ref|XP_003548357.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 618
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ QL+A+++ M
Sbjct: 452 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINQLQAKLKTM 503
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 7/92 (7%)
Query: 18 TDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRINQKMKALQ 73
+D S+S SE +D+ +K+ + + K R R +A QS R+RR+RIN++++ LQ
Sbjct: 235 SDGQSSSSNMSE---DDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQ 291
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
LVPN +K D ++ML+E ++Y+K L+ Q++++
Sbjct: 292 NLVPNGTKVDISTMLEEAVNYVKFLQLQIKLL 323
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
EN K H RR A H+ +ER RR++I+++MK LQ LVP +K T KA
Sbjct: 234 ENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAG 293
Query: 87 MLDEVIDYLKQLKAQVQMMN 106
MLDE+I+Y++ L+ QV+ ++
Sbjct: 294 MLDEIINYVQSLQRQVEFLS 313
>gi|56783853|dbj|BAD81265.1| bHLH protein -like [Oryza sativa Japonica Group]
gi|125569662|gb|EAZ11177.1| hypothetical protein OsJ_01027 [Oryza sativa Japonica Group]
Length = 613
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 519
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 520 ESGMIDP 526
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 104 MMN 106
++
Sbjct: 266 FLS 268
>gi|356520278|ref|XP_003528790.1| PREDICTED: transcription factor bHLH13-like [Glycine max]
Length = 626
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+A+++ + + R
Sbjct: 461 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKTIESERERFG 520
Query: 114 QMNMMMP 120
+M P
Sbjct: 521 STSMDGP 527
>gi|224067996|ref|XP_002302637.1| predicted protein [Populus trichocarpa]
gi|222844363|gb|EEE81910.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 43/59 (72%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+A+++ M R +
Sbjct: 376 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAISYINELQAKLKKMEAERGKL 434
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+Y+
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225
Query: 96 KQLKAQVQMM 105
+ L+ Q++ +
Sbjct: 226 QSLQRQIEFL 235
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K L+ QV+
Sbjct: 321 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKG 380
Query: 105 MNNVRNN 111
+N+ R N
Sbjct: 381 LNDSRAN 387
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD SA S++ K H RR A H+ +ER RR++I+++M
Sbjct: 91 SLRTEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 150
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 151 KVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLS 188
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 8/80 (10%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN ++K LQ LVPN +K D ++ML++ + Y+K L+ Q++++++ + M
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS-----EDLWMY 202
Query: 119 MPL---GMQQQLQMSLLARM 135
PL G+ L +LL+R+
Sbjct: 203 APLAHNGLNMGLHHNLLSRL 222
>gi|356526715|ref|XP_003531962.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 654
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 6 SYESLKSLKTKTTDEDSASHGRSENQD------------EDHETKTGRSHSSKRRRTAAV 53
S+ SL + K+ + G S++ D E K GR ++ R
Sbjct: 408 SFTSLPAANIKSVNGACVGAGDSDHSDLEASVAKQVVEPEKRPRKRGRKPANGREEPLN- 466
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++ ++++ + +
Sbjct: 467 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKSKLNVLDSEKTEL 525
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 223 ARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 282
Query: 104 MMN 106
++
Sbjct: 283 FLS 285
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR+RI+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 206 ARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVE 265
Query: 104 MMN 106
++
Sbjct: 266 FLS 268
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 130 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 189
Query: 104 MMN 106
++
Sbjct: 190 FLS 192
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+
Sbjct: 255 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 314
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 315 QVEFLS 320
>gi|115435532|ref|NP_001042524.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|113532055|dbj|BAF04438.1| Os01g0235700 [Oryza sativa Japonica Group]
gi|215694296|dbj|BAG89289.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768046|dbj|BAH00275.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 617
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 464 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 523
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 524 ESGMIDP 530
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
KT H RR A H+ +ER RR++I+++MK LQ LVP K T KA MLDE+I+Y+
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225
Query: 96 KQLKAQVQMM 105
+ L+ Q++ +
Sbjct: 226 QSLQRQIEFL 235
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD ++S +N K H RR A H+ +ER RR++I+++M
Sbjct: 95 SLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 154
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMM 105
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ M
Sbjct: 155 KILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>gi|333470596|gb|AEF33833.1| ICE transcription factor 1 [Eucalyptus globulus]
gi|333470598|gb|AEF33834.1| ICE transcription factor 1 [Eucalyptus globulus]
Length = 560
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
EDS G + N + T T K++ A + +ERRRR ++N ++ L+ +VP
Sbjct: 343 EDSKHEGCNSNANS---TVTVGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKI 399
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
SK D+AS+L + IDYLK+L ++ ++N + P M+ P
Sbjct: 400 SKMDRASILGDAIDYLKELLQRINDLHNELESTPPGTMLPP 440
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 126 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 185
Query: 104 MMN 106
++
Sbjct: 186 FLS 188
>gi|125547213|gb|EAY93035.1| hypothetical protein OsI_14836 [Oryza sativa Indica Group]
Length = 613
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 460 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 519
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 520 ESGMIDP 526
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 28 SENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKA 85
SE Q D K G H RR A H+ +ER RR++I+++MK LQ LVP K T KA
Sbjct: 157 SEKQPSD-SLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKA 215
Query: 86 SMLDEVIDYLKQLKAQVQMM 105
MLDE+I+Y++ L+ Q++ +
Sbjct: 216 VMLDEIINYVQSLQCQIEFL 235
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 15/99 (15%)
Query: 23 ASHGRSENQDEDHETKTGRSHSSK------------RRRTAAV--HNQSERRRRDRINQK 68
A S++ ED E + G+ ++K RR A H+ +ER RR+RI+Q+
Sbjct: 151 AEQAGSDSSVEDGEQRKGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQR 210
Query: 69 MKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 211 MKFLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLS 249
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 250 HSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLS 303
>gi|224126263|ref|XP_002329512.1| predicted protein [Populus trichocarpa]
gi|222870221|gb|EEF07352.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q
Sbjct: 455 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKTKLQ 504
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKAL 72
K T+E SA+ ED T+ G H RR A H+ +ER RR+RI+++M+ L
Sbjct: 118 KEANTEEKSAT--------EDEATR-GYIHVRARRGQATDSHSLAERVRRERISERMRML 168
Query: 73 QKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
Q LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 169 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 203
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKAL 72
K T+E SA+ ED T+ G H RR A H+ +ER RR+RI+++M+ L
Sbjct: 118 KEANTEEKSAT--------EDEATR-GYIHVRARRGQATDSHSLAERVRRERISERMRML 168
Query: 73 QKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
Q LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 169 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 203
>gi|296278597|gb|ADH04263.1| bHLH2 transcription factor [Nicotiana benthamiana]
Length = 657
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I ++ +LK++VQ
Sbjct: 486 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFINELKSKVQ 535
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 38/47 (80%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R+RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 234 RKRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 280
>gi|168025464|ref|XP_001765254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683573|gb|EDQ69982.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 800
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 38 KTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
K GR ++ R + H Q+ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +
Sbjct: 572 KRGRKPANDREEPLS-HVQAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINE 630
Query: 98 LKAQVQ 103
L +++Q
Sbjct: 631 LTSKLQ 636
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 40 GRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQ 97
G H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++
Sbjct: 301 GYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQS 360
Query: 98 LKAQVQMM 105
L+ QV+ +
Sbjct: 361 LQQQVEFL 368
>gi|312837910|gb|ADR01102.1| Rc protein [Oryza glaberrima]
gi|312837918|gb|ADR01106.1| Rc protein [Oryza glaberrima]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|297851702|ref|XP_002893732.1| ATMYC2 [Arabidopsis lyrata subsp. lyrata]
gi|297339574|gb|EFH69991.1| ATMYC2 [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I
Sbjct: 435 EKRPKKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 493
Query: 93 DYLKQLKAQV 102
Y+ +LK++V
Sbjct: 494 SYINELKSKV 503
>gi|255572178|ref|XP_002527029.1| hypothetical protein RCOM_1311480 [Ricinus communis]
gi|223533664|gb|EEF35401.1| hypothetical protein RCOM_1311480 [Ricinus communis]
Length = 243
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 36 ETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYL 95
E + ++H +++R +A + N ERRRRDRI KMK+L++L+P+ K D+ASMLD+ I+YL
Sbjct: 69 EPRRNKNHRNRKRISADMRNIYERRRRDRIRDKMKSLRELIPHCHKQDRASMLDDAINYL 128
Query: 96 KQLKAQVQMMNNV 108
K LK V+M+ N+
Sbjct: 129 KALKLHVEMLANM 141
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 29 ENQDEDHETKTGRSH-SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
E+ + TK H +KR + H+ +ER RR +I+++MK LQ LVP SK T KA
Sbjct: 132 EDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAV 191
Query: 87 MLDEVIDYLKQLKAQVQMM 105
MLDE+I+Y++ L+ QV+ +
Sbjct: 192 MLDEIINYVQSLQRQVEFL 210
>gi|324103810|gb|ADY17835.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 522 ILGDTIEYVKQLRNRIQEL 540
>gi|300827219|gb|ADK36621.1| Rc protein [Oryza glumipatula]
Length = 663
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827177|gb|ADK36600.1| Rc protein [Oryza rufipogon]
gi|300827191|gb|ADK36607.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|119672867|dbj|BAF42667.1| Myc-like proanthocyanidin regulatory protein [Oryza sativa Indica
Group]
Length = 673
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|324103812|gb|ADY17836.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 522 ILGDTIEYVKQLRNRIQEL 540
>gi|119672869|dbj|BAF42668.1| bHLH protein [Oryza sativa Indica Group]
gi|324103816|gb|ADY17838.1| bHLH transcription factor [Oryza sativa]
Length = 673
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 251 ARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 310
Query: 104 MM 105
+
Sbjct: 311 FL 312
>gi|324103814|gb|ADY17837.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|359806583|ref|NP_001241268.1| transcription factor ICE1-like [Glycine max]
gi|318056131|gb|ADV36252.1| ICEa [Glycine max]
Length = 450
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 40 GRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
G + KR+ A + +ERRRR ++N ++ L+ +VP SK D+AS+L + IDYLK+L
Sbjct: 249 GGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELL 308
Query: 100 AQVQMMNNVRNNMPQMNMMMP 120
++ ++N + P +++ P
Sbjct: 309 QRINDLHNELESTPPGSLLTP 329
>gi|312837906|gb|ADR01101.1| Rc protein [Oryza barthii]
gi|312837912|gb|ADR01103.1| Rc protein [Oryza glaberrima]
gi|312837914|gb|ADR01104.1| Rc protein [Oryza glaberrima]
gi|312837916|gb|ADR01105.1| Rc protein [Oryza glaberrima]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|312837904|gb|ADR01100.1| Rc protein [Oryza barthii]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K LK QVQ +++
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELHS 217
>gi|300827229|gb|ADK36626.1| Rc protein [Oryza rufipogon]
Length = 667
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827209|gb|ADK36616.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827175|gb|ADK36599.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVP 77
DE+SA +++ + E H RR A H+ +ER RR++I+++MK LQ LVP
Sbjct: 229 DENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVP 288
Query: 78 NASK-TDKASMLDEVIDYLKQLKAQVQMM 105
+K T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 289 GCNKVTGKALMLDEIINYVQSLQHQVEFL 317
>gi|324103818|gb|ADY17839.1| bHLH transcription factor [Oryza sativa]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|324103806|gb|ADY17833.1| bHLH transcription factor [Oryza sativa Indica Group]
gi|324103828|gb|ADY17844.1| bHLH transcription factor [Oryza sativa Indica Group]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|300827205|gb|ADK36614.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|359479613|ref|XP_002282584.2| PREDICTED: transcription factor bHLH3-like [Vitis vinifera]
Length = 491
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 325 DERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 383
Query: 92 IDY-------LKQLKAQVQMMNNVRNN--MPQMNM 117
I Y ++ L+A+ +++NN +N +PQ++
Sbjct: 384 ISYITDLQMKIRILEAEKEIVNNKQNQSPVPQIDF 418
>gi|300827217|gb|ADK36620.1| Rc protein [Oryza glumipatula]
Length = 670
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 464 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 523
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 524 ILGDTIEYVKQLRNRIQ 540
>gi|78057270|gb|ABB17167.1| brown pericarp and seed coat [Oryza rufipogon]
gi|300827057|gb|ADK36540.1| Rc protein [Oryza sativa]
gi|300827059|gb|ADK36541.1| Rc protein [Oryza sativa]
gi|300827061|gb|ADK36542.1| Rc protein [Oryza sativa]
gi|300827063|gb|ADK36543.1| Rc protein [Oryza sativa]
gi|300827065|gb|ADK36544.1| Rc protein [Oryza sativa]
gi|300827067|gb|ADK36545.1| Rc protein [Oryza sativa]
gi|300827069|gb|ADK36546.1| Rc protein [Oryza sativa]
gi|300827071|gb|ADK36547.1| Rc protein [Oryza sativa]
gi|300827073|gb|ADK36548.1| Rc protein [Oryza sativa]
gi|300827075|gb|ADK36549.1| Rc protein [Oryza sativa]
gi|300827077|gb|ADK36550.1| Rc protein [Oryza sativa]
gi|300827079|gb|ADK36551.1| Rc protein [Oryza sativa]
gi|300827081|gb|ADK36552.1| Rc protein [Oryza sativa]
gi|300827083|gb|ADK36553.1| Rc protein [Oryza sativa]
gi|300827085|gb|ADK36554.1| Rc protein [Oryza sativa]
gi|300827087|gb|ADK36555.1| Rc protein [Oryza sativa]
gi|300827089|gb|ADK36556.1| Rc protein [Oryza sativa]
gi|300827093|gb|ADK36558.1| Rc protein [Oryza sativa]
gi|300827095|gb|ADK36559.1| Rc protein [Oryza sativa]
gi|300827097|gb|ADK36560.1| Rc protein [Oryza sativa]
gi|300827099|gb|ADK36561.1| Rc protein [Oryza sativa]
gi|300827101|gb|ADK36562.1| Rc protein [Oryza sativa]
gi|300827103|gb|ADK36563.1| Rc protein [Oryza sativa]
gi|300827105|gb|ADK36564.1| Rc protein [Oryza sativa]
gi|300827107|gb|ADK36565.1| Rc protein [Oryza sativa]
gi|300827109|gb|ADK36566.1| Rc protein [Oryza sativa]
gi|300827111|gb|ADK36567.1| Rc protein [Oryza sativa]
gi|300827113|gb|ADK36568.1| Rc protein [Oryza sativa]
gi|300827115|gb|ADK36569.1| Rc protein [Oryza sativa]
gi|300827117|gb|ADK36570.1| Rc protein [Oryza sativa]
gi|300827119|gb|ADK36571.1| Rc protein [Oryza sativa]
gi|300827121|gb|ADK36572.1| Rc protein [Oryza sativa]
gi|300827123|gb|ADK36573.1| Rc protein [Oryza sativa]
gi|300827125|gb|ADK36574.1| Rc protein [Oryza sativa]
gi|300827127|gb|ADK36575.1| Rc protein [Oryza sativa]
gi|300827129|gb|ADK36576.1| Rc protein [Oryza sativa]
gi|300827131|gb|ADK36577.1| Rc protein [Oryza sativa]
gi|300827133|gb|ADK36578.1| Rc protein [Oryza sativa]
gi|300827135|gb|ADK36579.1| Rc protein [Oryza sativa]
gi|300827137|gb|ADK36580.1| Rc protein [Oryza sativa]
gi|300827139|gb|ADK36581.1| Rc protein [Oryza sativa]
gi|300827141|gb|ADK36582.1| Rc protein [Oryza sativa]
gi|300827143|gb|ADK36583.1| Rc protein [Oryza sativa]
gi|300827145|gb|ADK36584.1| Rc protein [Oryza sativa]
gi|300827147|gb|ADK36585.1| Rc protein [Oryza sativa]
gi|300827149|gb|ADK36586.1| Rc protein [Oryza sativa]
gi|300827151|gb|ADK36587.1| Rc protein [Oryza sativa]
gi|300827153|gb|ADK36588.1| Rc protein [Oryza sativa]
gi|300827155|gb|ADK36589.1| Rc protein [Oryza sativa]
gi|300827157|gb|ADK36590.1| Rc protein [Oryza sativa]
gi|300827159|gb|ADK36591.1| Rc protein [Oryza sativa]
gi|300827161|gb|ADK36592.1| Rc protein [Oryza sativa]
gi|300827163|gb|ADK36593.1| Rc protein [Oryza sativa]
gi|300827165|gb|ADK36594.1| Rc protein [Oryza sativa]
gi|300827167|gb|ADK36595.1| Rc protein [Oryza sativa]
gi|300827171|gb|ADK36597.1| Rc protein [Oryza rufipogon]
gi|300827187|gb|ADK36605.1| Rc protein [Oryza rufipogon]
gi|300827207|gb|ADK36615.1| Rc protein [Oryza rufipogon]
gi|300827223|gb|ADK36623.1| Rc protein [Oryza sativa Indica Group]
gi|300827225|gb|ADK36624.1| Rc protein [Oryza sativa Indica Group]
Length = 668
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827221|gb|ADK36622.1| Rc protein [Oryza meridionalis]
Length = 672
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 465 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 524
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 525 ILGDTIEYVKQLRNRIQ 541
>gi|300827169|gb|ADK36596.1| Rc protein [Oryza sativa Indica Group]
gi|300827185|gb|ADK36604.1| Rc protein [Oryza rufipogon]
gi|300827197|gb|ADK36610.1| Rc protein [Oryza rufipogon]
gi|300827211|gb|ADK36617.1| Rc protein [Oryza rufipogon]
gi|300827213|gb|ADK36618.1| Rc protein [Oryza nivara]
gi|300827227|gb|ADK36625.1| Rc protein [Oryza sativa Indica Group]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|324103824|gb|ADY17842.1| bHLH transcription factor [Oryza glaberrima]
Length = 671
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 522 ILGDTIEYVKQLRNRIQEL 540
>gi|324103822|gb|ADY17841.1| bHLH transcription factor [Oryza rufipogon]
Length = 669
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 462 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 521
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 522 ILGDTIEYVKQLRNRIQ 538
>gi|328687909|gb|AEB35566.1| MYC2 [Helianthus petiolaris]
Length = 136
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ----MMNNVR 109
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ + +R
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIXYINELKAKLENNEGXKDELR 72
Query: 110 NNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
N + + + + Q+ ++MS + G L + ++ + M ++ P
Sbjct: 73 NQIDALKKELSNKVSAQENMKMSSITTRGPPADLDVDVKVIGWDAMIRVQCNKKSHP 129
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 23/128 (17%)
Query: 1 MMTWASYESLKSLKTKTTDEDSAS----HGRSE----NQDEDHETKTGRSHSSK------ 46
M T A+ E + K+T+E +A+ G+ + N + K G+ SSK
Sbjct: 10 MSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKPPEPPK 69
Query: 47 ------RRRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQ 97
RR A H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++
Sbjct: 70 DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQS 129
Query: 98 LKAQVQMM 105
L+ QV+ +
Sbjct: 130 LQRQVEFL 137
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD +AS +N K H RR A H+ +ER RR++I+++M
Sbjct: 62 SLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 121
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 122 KILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLS 159
>gi|380006417|gb|AFD29599.1| DEL61 [Gossypium arboreum]
Length = 603
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H +ERRRR++IN+++ L+ LVP SK DK S+LD+ I+YL+ L+ +V+ + R
Sbjct: 425 HVLTERRRREKINERLTILKSLVPTNSKADKVSILDDTIEYLQDLERRVEELECCR 480
>gi|296278610|gb|ADH04269.1| MYC2a transcription factor [Nicotiana tabacum]
Length = 659
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I ++ +LK++VQ
Sbjct: 488 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFINELKSKVQ 537
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K LK QVQ + +
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQELQH 217
>gi|300827215|gb|ADK36619.1| Rc protein [Oryza nivara]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 517 ILGDTIEYVKQLRNRIQEL 535
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 261 ARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQVE 320
Query: 104 MM 105
+
Sbjct: 321 FL 322
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 33 EDHETKTGRS----HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNAS-KTDKAS 86
+D E++ G H RR A H+ +ER RR++I+++M+ LQ+LVP KT KA
Sbjct: 216 DDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAV 275
Query: 87 MLDEVIDYLKQLKAQVQMMN-NVRNNMPQMNM 117
MLDE+I+Y++ L+ QV+ ++ + PQ+N
Sbjct: 276 MLDEIINYVQSLQQQVEFLSMKLATVNPQLNF 307
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ +R A H +S ER RR +I+++++ LQ+LVPN K T+ + MLD +DY+K+L+ QV
Sbjct: 325 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 384
Query: 103 QMMNNVR 109
++MN+ R
Sbjct: 385 KVMNDGR 391
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 42 SHSSKRRRTAAVHNQ----SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
S + RRR + + + R RR+R++++++ LQ+LVP S+ D ASMLDE YLK
Sbjct: 274 SQNKPRRRNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKF 333
Query: 98 LKAQVQMM 105
LK+QV+ +
Sbjct: 334 LKSQVKAL 341
>gi|300827193|gb|ADK36608.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827183|gb|ADK36603.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827091|gb|ADK36557.1| Rc protein [Oryza sativa]
Length = 668
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 234 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 293
Query: 104 MM 105
+
Sbjct: 294 FL 295
>gi|78057267|gb|ABB17166.1| brown pericarp and seed coat [Oryza sativa Japonica Group]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 517 ILGDTIEYVKQLRNRIQEL 535
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ +R A H +S ER RR +I+++++ LQ+LVPN K T+ A MLD +DY+K L+ QV
Sbjct: 326 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQV 385
Query: 103 QMMNNVR 109
+++N+ R
Sbjct: 386 KVLNDGR 392
>gi|212721432|ref|NP_001131577.1| uncharacterized protein LOC100192921 [Zea mays]
gi|194691908|gb|ACF80038.1| unknown [Zea mays]
gi|414881478|tpg|DAA58609.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|414881479|tpg|DAA58610.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 427
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 40 GRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
GR+ + R ++ + R+RR+RI+ +++ LQKLVP +K D ASMLDE YL+ LK
Sbjct: 309 GRNPARNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLK 368
Query: 100 AQVQMMNNV-RNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAA 158
+QV+ + + R N + ++ A +G + G G + T AA
Sbjct: 369 SQVRDLQTLDRRNYGAAS-------SNDAAATMAAVVGSSLSYNRGTGAMPAFTFPAAGE 421
Query: 159 TARTA 163
T R A
Sbjct: 422 TLRGA 426
>gi|300827179|gb|ADK36601.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Query: 42 SHSSKRRRTAAVHNQ----SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
S + RRR + + + R RR+R++++++ LQ+LVP S+ D ASMLDE YLK
Sbjct: 275 SQNKPRRRNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAAGYLKF 334
Query: 98 LKAQVQMM 105
LK+QV+ +
Sbjct: 335 LKSQVKAL 342
>gi|414591460|tpg|DAA42031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 519
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHS---SKRRRTAAVHNQSERRRRDRINQKMKALQKL 75
D + A G ++ +D + S KR+R A + +ERRRR ++N ++ L+ +
Sbjct: 286 DSEDACRGVEDSGKKDGKGSNANSAGDGKGKRKRLPAKNLMAERRRRKKLNDRLYMLRSV 345
Query: 76 VPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
VP SK D+AS+L + I+YLK+L +++ + N
Sbjct: 346 VPKISKMDRASILGDAIEYLKELLRKIEELQN 377
>gi|296278612|gb|ADH04270.1| MYC2b transcription factor [Nicotiana tabacum]
Length = 658
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I ++ +LK++VQ
Sbjct: 487 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFINELKSKVQ 536
>gi|163311836|gb|ABY26931.1| putative anthocyanin transcriptional regulator [Ipomoea quamoclit]
Length = 659
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 52 AVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
A H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R +
Sbjct: 460 ANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEATRGS 519
Query: 112 MPQMN 116
+++
Sbjct: 520 ASEVD 524
>gi|297735523|emb|CBI17963.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 289 DERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 347
Query: 92 IDY-------LKQLKAQVQMMNNVRNN--MPQMNM 117
I Y ++ L+A+ +++NN +N +PQ++
Sbjct: 348 ISYITDLQMKIRILEAEKEIVNNKQNQSPVPQIDF 382
>gi|300827195|gb|ADK36609.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827181|gb|ADK36602.1| Rc protein [Oryza rufipogon]
gi|300827189|gb|ADK36606.1| Rc protein [Oryza rufipogon]
Length = 664
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827173|gb|ADK36598.1| Rc protein [Oryza rufipogon]
Length = 667
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 460 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 519
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 520 ILGDTIEYVKQLRNRIQ 536
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV+
Sbjct: 66 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE 125
Query: 104 M--MNNVRNNMPQMN 116
M N+P+++
Sbjct: 126 FLSMKLATVNVPRLD 140
>gi|449530935|ref|XP_004172447.1| PREDICTED: transcription factor AIG1-like [Cucumis sativus]
Length = 239
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H ++ERRRR RIN + L+ L+PN +KTDKAS+L EV+ ++K+L+
Sbjct: 56 HKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELR 101
>gi|324103820|gb|ADY17840.1| bHLH transcription factor, partial [Oryza rufipogon]
Length = 639
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 430 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 489
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 490 ILGDTIEYVKQLRNRIQEL 508
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 22 SASHGRSENQDE----DHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKL 75
S S G S +D D +S +S+ + + QS +RRR+RIN++++ LQ+L
Sbjct: 128 SCSSGSSVGEDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQL 187
Query: 76 VPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
VPN +K D ++ML+E + Y+K L+ Q++++++
Sbjct: 188 VPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 219
>gi|300827201|gb|ADK36612.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|300827199|gb|ADK36611.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|163311840|gb|ABY26933.1| putative anthocyanin transcriptional regulator [Ipomoea trifida]
Length = 676
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 44/63 (69%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R +
Sbjct: 482 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGSAC 541
Query: 114 QMN 116
+++
Sbjct: 542 EVD 544
>gi|122934781|gb|ABM68354.1| Rc protein [Oryza sativa Indica Group]
Length = 636
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 485 ILGDTIEYVKQLRNRIQ 501
>gi|122934775|gb|ABM68351.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 485 ILGDTIEYVKQLRNRIQ 501
>gi|122934779|gb|ABM68353.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 485 ILGDTIEYVKQLRNRIQ 501
>gi|300827203|gb|ADK36613.1| Rc protein [Oryza rufipogon]
Length = 666
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 457 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 516
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 517 ILGDTIEYVKQLRNRIQ 533
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K LK QVQ
Sbjct: 169 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQ 213
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
R RR+RI+++++ LQ+LVP +K D ASMLDE I Y+K LK QVQ
Sbjct: 168 RHRRERISERVRVLQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQ 212
>gi|328687889|gb|AEB35556.1| MYC2 [Lactuca virosa]
gi|328687891|gb|AEB35557.1| MYC2 [Lactuca virosa]
Length = 317
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 163 SRESKISDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 221
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R
Sbjct: 222 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESER 262
>gi|151383081|gb|ABS11038.1| MYC [Brassica oleracea var. gemmifera]
Length = 610
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I
Sbjct: 419 EKRPKKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 477
Query: 93 DYLKQLKAQV 102
Y+ +LK++V
Sbjct: 478 AYINELKSKV 487
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDE-DHETKTGRS------HSSKRRRTAA-VHNQSERRR 61
+KS K K + + A EN + D E K + H RR A H+ +ER R
Sbjct: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
Query: 62 RDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
R++I+++MK LQKLVP K T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
>gi|356536767|ref|XP_003536906.1| PREDICTED: transcription factor TT8-like [Glycine max]
Length = 654
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 26 GRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKA 85
G S Q +TK R + + +A H +ERRRR+++N++ L+ LVP +K DKA
Sbjct: 437 GESSPQTTAADTKL-RGKGAPQEELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKA 495
Query: 86 SMLDEVIDYLKQLKAQVQMM 105
S+L + I+Y+KQL+ ++Q +
Sbjct: 496 SILGDTIEYVKQLRRKIQEL 515
>gi|356520239|ref|XP_003528771.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 464
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 42/58 (72%)
Query: 48 RRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R T H ++ER+RR+++N + AL+ +VPN S+ DKAS+L + + Y+ +LKA+++ +
Sbjct: 281 RETPVNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYISELKAKIEYL 338
>gi|122934767|gb|ABM68347.1| Rc protein [Oryza sativa Japonica Group]
gi|122934771|gb|ABM68349.1| Rc protein [Oryza sativa Japonica Group]
gi|122934773|gb|ABM68350.1| Rc protein [Oryza sativa Japonica Group]
Length = 634
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 485 ILGDTIEYVKQLRNRIQEL 503
>gi|441433511|gb|AGC31677.1| basic helix loop helix [Solanum tuberosum]
Length = 689
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%)
Query: 44 SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
S+++ T H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ +VQ
Sbjct: 485 STQQEETNGNHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQ 544
>gi|357440757|ref|XP_003590656.1| Transcription factor TT8 [Medicago truncatula]
gi|355479704|gb|AES60907.1| Transcription factor TT8 [Medicago truncatula]
Length = 656
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 13 LKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
L TK DE S ++ + D +K R + + +A H +ERRRR+++N++ L
Sbjct: 434 LHTKNHDETSP---QTHDAGVDPSSKL-RGKGTPQDELSANHVLAERRRREKLNERFIIL 489
Query: 73 QKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
+ LVP +K DKAS+L + I+YLKQL+ ++Q
Sbjct: 490 RSLVPFVTKMDKASILGDTIEYLKQLRRKIQ 520
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 239 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVE 298
Query: 104 MM 105
+
Sbjct: 299 FL 300
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++ + + + +P
Sbjct: 104 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 158
>gi|449470060|ref|XP_004152736.1| PREDICTED: transcription factor AIG1-like [Cucumis sativus]
Length = 205
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H ++ERRRR RIN + L+ L+PN +KTDKAS+L EV+ ++K+L+
Sbjct: 22 HKEAERRRRQRINSHLSTLRTLLPNTTKTDKASLLAEVVSHVKELR 67
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 22 SASHGRSENQDE----DHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKL 75
S S G S +D D +S +S+ + + QS +RRR+RIN++++ LQ+L
Sbjct: 140 SCSSGSSVGEDSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQL 199
Query: 76 VPNASKTDKASMLDEVIDYLKQLKAQVQMMNN 107
VPN +K D ++ML+E + Y+K L+ Q++++++
Sbjct: 200 VPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 231
>gi|122934769|gb|ABM68348.1| Rc protein [Oryza sativa Japonica Group]
Length = 634
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGTRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQMM 105
+L + I+Y+KQL+ ++Q +
Sbjct: 485 ILGDTIEYVKQLRNRIQEL 503
>gi|51090503|dbj|BAD35705.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 211
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
R RR+R++Q+M+ALQ+LVP ++ D ASML+E I Y+K LK VQ
Sbjct: 130 RLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQ 174
>gi|351724377|ref|NP_001238591.1| inducer of CBF expression 3 [Glycine max]
gi|213053816|gb|ACJ39213.1| inducer of CBF expression 3 [Glycine max]
Length = 336
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 1 MMTWASYESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERR 60
++ S++ L +DE S + + E + + +++S+K+ A + +ERR
Sbjct: 99 LIDSGSFDG-SGLNNYDSDEISDDNNKMEEISARNGGNSSKANSTKKTGIPAKNLMAERR 157
Query: 61 RRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMN---- 116
RR ++N ++ L+ +VPN SK D+AS+L + I+YLK+L ++ ++N + P
Sbjct: 158 RRKKLNDRLYMLRSVVPNISKMDRASILGDAIEYLKELLQRISELHNELESTPAGGSSSF 217
Query: 117 -------MMMPLGMQQQLQMSLL---------ARMGMGVGLGTGMGM 147
+P MQ++L +S L AR+ +G+ G G+ +
Sbjct: 218 LHHPLTPTTLPARMQEELCLSSLPSPNGHPANARVEVGLREGRGVNI 264
>gi|328687875|gb|AEB35549.1| MYC2 [Lactuca virosa]
gi|328687881|gb|AEB35552.1| MYC2 [Lactuca virosa]
gi|328687883|gb|AEB35553.1| MYC2 [Lactuca virosa]
gi|328687885|gb|AEB35554.1| MYC2 [Lactuca virosa]
gi|328687887|gb|AEB35555.1| MYC2 [Lactuca virosa]
gi|328687893|gb|AEB35558.1| MYC2 [Lactuca virosa]
gi|328687895|gb|AEB35559.1| MYC2 [Lactuca virosa]
gi|328687897|gb|AEB35560.1| MYC2 [Lactuca virosa]
gi|328687899|gb|AEB35561.1| MYC2 [Lactuca virosa]
Length = 317
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 163 SRESKISDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 221
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R
Sbjct: 222 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESER 262
>gi|223702414|gb|ACN21638.1| putative basic helix-loop-helix protein BHLH22 [Lotus japonicus]
Length = 641
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q
Sbjct: 458 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 507
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN++MK LQ LVP +K T KA MLDE+I+Y++ L+ Q++
Sbjct: 100 AKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQIE 159
Query: 104 MMN 106
++
Sbjct: 160 FLS 162
>gi|226529544|ref|NP_001145780.1| uncharacterized protein LOC100279287 [Zea mays]
gi|219884401|gb|ACL52575.1| unknown [Zea mays]
Length = 455
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 302 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMETERERLL 361
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 362 ESGMVDP 368
>gi|328687711|gb|AEB35467.1| MYC2 [Lactuca sativa]
gi|328687713|gb|AEB35468.1| MYC2 [Lactuca sativa]
gi|328687715|gb|AEB35469.1| MYC2 [Lactuca sativa]
gi|328687717|gb|AEB35470.1| MYC2 [Lactuca sativa]
gi|328687719|gb|AEB35471.1| MYC2 [Lactuca sativa]
gi|328687721|gb|AEB35472.1| MYC2 [Lactuca sativa]
gi|328687723|gb|AEB35473.1| MYC2 [Lactuca sativa]
gi|328687725|gb|AEB35474.1| MYC2 [Lactuca sativa]
gi|328687727|gb|AEB35475.1| MYC2 [Lactuca sativa]
gi|328687729|gb|AEB35476.1| MYC2 [Lactuca sativa]
gi|328687731|gb|AEB35477.1| MYC2 [Lactuca sativa]
gi|328687733|gb|AEB35478.1| MYC2 [Lactuca sativa]
gi|328687735|gb|AEB35479.1| MYC2 [Lactuca sativa]
gi|328687737|gb|AEB35480.1| MYC2 [Lactuca sativa]
gi|328687739|gb|AEB35481.1| MYC2 [Lactuca sativa]
gi|328687741|gb|AEB35482.1| MYC2 [Lactuca sativa]
gi|328687743|gb|AEB35483.1| MYC2 [Lactuca sativa]
gi|328687745|gb|AEB35484.1| MYC2 [Lactuca sativa]
gi|328687747|gb|AEB35485.1| MYC2 [Lactuca sativa]
gi|328687749|gb|AEB35486.1| MYC2 [Lactuca sativa]
gi|328687751|gb|AEB35487.1| MYC2 [Lactuca sativa]
gi|328687753|gb|AEB35488.1| MYC2 [Lactuca sativa]
gi|328687755|gb|AEB35489.1| MYC2 [Lactuca sativa]
gi|328687757|gb|AEB35490.1| MYC2 [Lactuca sativa]
gi|328687759|gb|AEB35491.1| MYC2 [Lactuca sativa]
gi|328687761|gb|AEB35492.1| MYC2 [Lactuca sativa]
gi|328687763|gb|AEB35493.1| MYC2 [Lactuca sativa]
gi|328687765|gb|AEB35494.1| MYC2 [Lactuca sativa]
gi|328687767|gb|AEB35495.1| MYC2 [Lactuca sativa]
gi|328687769|gb|AEB35496.1| MYC2 [Lactuca sativa]
gi|328687771|gb|AEB35497.1| MYC2 [Lactuca sativa]
gi|328687773|gb|AEB35498.1| MYC2 [Lactuca sativa]
gi|328687775|gb|AEB35499.1| MYC2 [Lactuca sativa]
gi|328687777|gb|AEB35500.1| MYC2 [Lactuca serriola]
gi|328687779|gb|AEB35501.1| MYC2 [Lactuca serriola]
gi|328687781|gb|AEB35502.1| MYC2 [Lactuca serriola]
gi|328687783|gb|AEB35503.1| MYC2 [Lactuca serriola]
gi|328687785|gb|AEB35504.1| MYC2 [Lactuca serriola]
gi|328687787|gb|AEB35505.1| MYC2 [Lactuca serriola]
gi|328687789|gb|AEB35506.1| MYC2 [Lactuca serriola]
gi|328687791|gb|AEB35507.1| MYC2 [Lactuca serriola]
gi|328687793|gb|AEB35508.1| MYC2 [Lactuca serriola]
gi|328687795|gb|AEB35509.1| MYC2 [Lactuca serriola]
gi|328687797|gb|AEB35510.1| MYC2 [Lactuca serriola]
gi|328687799|gb|AEB35511.1| MYC2 [Lactuca serriola]
gi|328687801|gb|AEB35512.1| MYC2 [Lactuca serriola]
gi|328687803|gb|AEB35513.1| MYC2 [Lactuca serriola]
gi|328687805|gb|AEB35514.1| MYC2 [Lactuca serriola]
gi|328687807|gb|AEB35515.1| MYC2 [Lactuca serriola]
gi|328687809|gb|AEB35516.1| MYC2 [Lactuca serriola]
gi|328687811|gb|AEB35517.1| MYC2 [Lactuca serriola]
gi|328687813|gb|AEB35518.1| MYC2 [Lactuca serriola]
gi|328687815|gb|AEB35519.1| MYC2 [Lactuca serriola]
gi|328687817|gb|AEB35520.1| MYC2 [Lactuca serriola]
gi|328687819|gb|AEB35521.1| MYC2 [Lactuca serriola]
gi|328687879|gb|AEB35551.1| MYC2 [Lactuca virosa]
gi|328687901|gb|AEB35562.1| MYC2 [Lactuca sativa]
Length = 317
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 163 SRESKISDETPARDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 221
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R
Sbjct: 222 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESER 262
>gi|413920361|gb|AFW60293.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 241
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 39/47 (82%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
+RRR+RIN+K++ LQ+L+PN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 183 KRRRERINEKLRTLQQLIPNGTKVDMSTMLEEAVQYVKFLQLQIKLL 229
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++
Sbjct: 125 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAILYVKFLKRQIRLL 171
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++ +
Sbjct: 134 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRFL 180
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 375 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 434
Query: 104 MMN 106
++
Sbjct: 435 FLS 437
>gi|15240948|ref|NP_195751.1| aprataxin [Arabidopsis thaliana]
gi|75335734|sp|Q9M041.1|BH140_ARATH RecName: Full=Transcription factor bHLH140; AltName: Full=Basic
helix-loop-helix protein 140; Short=AtbHLH140;
Short=bHLH 140; AltName: Full=Transcription factor EN
122; AltName: Full=bHLH transcription factor bHLH140
gi|7320709|emb|CAB81914.1| putative protein [Arabidopsis thaliana]
gi|332002943|gb|AED90326.1| aprataxin [Arabidopsis thaliana]
Length = 912
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 35 HETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
H+++TG + S+ T + QS R RR RI+ + K LQ +VP +K D SMLDE I
Sbjct: 27 HKSETGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAI 86
Query: 93 DYLKQLKAQVQMMNN 107
Y+K LKAQ+ N
Sbjct: 87 SYVKFLKAQIWYHQN 101
>gi|426264530|gb|AFY17139.1| bHLH [Citrus trifoliata]
Length = 487
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
KR+ A + +ERRRR ++N ++ L+ +VP SK D+AS+L + IDYLK+L ++
Sbjct: 296 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 355
Query: 105 MNNVRNNMPQMNMMMP 120
++N + P ++M P
Sbjct: 356 LHNELESTPTGSLMQP 371
>gi|163311838|gb|ABY26932.1| putative anthocyanin transcriptional regulator [Ipomoea coccinea]
Length = 661
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 52 AVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
A H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R +
Sbjct: 462 ANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGS 521
Query: 112 MPQMN 116
+++
Sbjct: 522 ASEVD 526
>gi|224119802|ref|XP_002318166.1| predicted protein [Populus trichocarpa]
gi|222858839|gb|EEE96386.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 17 TTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
T E++ +G + ++ T G K+R A + +ERRRR ++N ++ L+ +V
Sbjct: 323 TNLEETGKNGGNSSKANSGVTGGGVDQKGKKRGLPAKNLMAERRRRKKLNDRLYMLRSVV 382
Query: 77 PNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
P SK D+AS+L + IDYLK+L ++ ++N + P + + P
Sbjct: 383 PKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPSSSLTP 426
>gi|125564028|gb|EAZ09408.1| hypothetical protein OsI_31681 [Oryza sativa Indica Group]
Length = 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 40/48 (83%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ER+RR+RIN + L+ LVP+AS+ DKA++L EV+ Y+++L+++
Sbjct: 32 HSEAERKRRERINAHLDTLRGLVPSASRIDKAALLGEVVRYVRKLRSE 79
>gi|328687877|gb|AEB35550.1| MYC2 [Lactuca virosa]
Length = 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 163 SRESKISDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 221
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R
Sbjct: 222 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESER 262
>gi|324022722|gb|ADY15317.1| transparent testa 8 [Prunus avium]
Length = 565
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 27 RSENQDEDHETKTGRSHSSKRRRT-----AAVHNQSERRRRDRINQKMKALQKLVPNASK 81
R EN + HE G + + R+ T +A H +ERRRR+++N++ L+ LVP +K
Sbjct: 392 RDENSPKSHE---GDASTRLRKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTK 448
Query: 82 TDKASMLDEVIDYLKQLKAQVQ 103
DKAS+L + I+Y+KQL+ ++Q
Sbjct: 449 MDKASILGDTIEYVKQLRKKIQ 470
>gi|413955100|gb|AFW87749.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 703
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 42/59 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++ + + R +
Sbjct: 524 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTSLESDRETL 582
>gi|302398601|gb|ADL36595.1| BHLH domain class transcription factor [Malus x domestica]
Length = 691
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM----NNVR 109
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q + ++
Sbjct: 513 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQTVETDKEELQ 572
Query: 110 NNMPQMNMMMP 120
+ MN +P
Sbjct: 573 KQLESMNKDLP 583
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+
Sbjct: 75 HVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 134
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 135 QVEFLS 140
>gi|18026960|gb|AAL55713.1|AF251691_1 putative transcription factor BHLH6 [Arabidopsis thaliana]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK++V
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 21/113 (18%)
Query: 14 KTKTTDEDSASHGRSE-NQDEDHETKTGRS------------------HSSKRRRTAA-V 53
++K T++ S +G+S N++ + ET + + H RR A
Sbjct: 162 ESKVTEQTSNKNGKSNANKNNNRETTSAETSKDNSKGSEVQNQKPEYIHVRARRGQATDS 221
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMM 105
H+ +ER RR++I+++MK LQ LVP +K KA MLDE+I+Y++ L+ QV+ +
Sbjct: 222 HSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 274
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQ 199
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 200 QVEFLS 205
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++ + + + +P
Sbjct: 41 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRQLQSNHHPLP 95
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+
Sbjct: 233 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 292
Query: 101 QVQMM 105
QV+ +
Sbjct: 293 QVEFL 297
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 46 KRRRT-AAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
KRR ++ QS R RR+RI+ +++ LQ+LVP +K D ASMLDE I Y+K LK Q+
Sbjct: 363 KRRNVRISIDTQSVAARHRRERISDRIRVLQRLVPGGTKMDTASMLDEAIHYIKFLKQQL 422
Query: 103 QMM 105
Q +
Sbjct: 423 QTL 425
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 104 MMN 106
++
Sbjct: 236 FLS 238
>gi|334200174|gb|AEG74014.1| lMYC4 [Hevea brasiliensis]
Length = 470
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ +VPN SK DKAS+L + + Y+++LKA+V
Sbjct: 301 HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIEELKAKV 349
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+
Sbjct: 144 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQR 203
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 204 QVEFLS 209
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 176 ARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 235
Query: 104 MMN 106
++
Sbjct: 236 FLS 238
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 46 KRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQV 102
+ +R A H +S ER RR +I+++++ LQ+LVPN K T+ + MLD +DY+K+L+ QV
Sbjct: 328 RAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQV 387
Query: 103 QMMNNVR 109
++MN+ R
Sbjct: 388 KVMNDGR 394
>gi|15223256|ref|NP_174541.1| transcription factor MYC2 [Arabidopsis thaliana]
gi|34222779|sp|Q39204.2|RAP1_ARATH RecName: Full=Transcription factor MYC2; Short=AtMYC2; AltName:
Full=Basic helix-loop-helix protein 6; Short=AtbHLH6;
Short=bHLH 6; AltName: Full=Protein JASMONATE
INSENSITIVE 1; AltName: Full=R-homologous Arabidopsis
protein 1; Short=RAP-1; AltName: Full=Transcription
factor EN 38; AltName: Full=Z-box binding factor 1
protein; AltName: Full=bHLH transcription factor
bHLH006; AltName: Full=rd22BP1
gi|6714284|gb|AAF25980.1|AC017118_17 F6N18.4 [Arabidopsis thaliana]
gi|14335048|gb|AAK59788.1| At1g32640/F6N18_4 [Arabidopsis thaliana]
gi|27764972|gb|AAO23607.1| At1g32640/F6N18_4 [Arabidopsis thaliana]
gi|57336395|emb|CAH58735.1| Z-box binding factor 1 protein [Arabidopsis thaliana]
gi|197116074|emb|CAA67885.2| bHLH protein [Arabidopsis thaliana]
gi|332193392|gb|AEE31513.1| transcription factor MYC2 [Arabidopsis thaliana]
Length = 623
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK++V
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501
>gi|414881477|tpg|DAA58608.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 481
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 47 RRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+ +++ LQKLVP +K D ASMLDE YL+ LK+QV
Sbjct: 366 RRRNVRISSDPQTVAARQRRERISDRLRVLQKLVPGGAKMDTASMLDEAASYLRFLKSQV 425
Query: 103 QMMNNV-RNNMPQMNMMMPLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATAR 161
+ + + R N + ++ A +G + G G + T AA T R
Sbjct: 426 RDLQTLDRRNYGAAS-------SNDAAATMAAVVGSSLSYNRGTGAMPAFTFPAAGETLR 478
Query: 162 TA 163
A
Sbjct: 479 GA 480
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 29 ENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKAS 86
EN K H RR A H+ +ER RR++I+++M+ LQ+LVP +K T KA
Sbjct: 227 ENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 286
Query: 87 MLDEVIDYLKQLKAQVQMM 105
MLDE+I+Y++ L+ QV+ +
Sbjct: 287 MLDEIINYVQSLQQQVEFL 305
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN 110
R+RR +I+++++ L+KLVP +K D ASMLDE I ++K L+ QVQ++ V N
Sbjct: 394 RQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGN 445
>gi|297840129|ref|XP_002887946.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
gi|297333787|gb|EFH64205.1| hypothetical protein ARALYDRAFT_474990 [Arabidopsis lyrata subsp.
lyrata]
Length = 596
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 42/56 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H SE++RR+++N++ L+ ++P+ SK DK S+LD+ I+YL++L+ +VQ + + R
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQELQKRVQELESCR 461
>gi|296278608|gb|ADH04268.1| MYC1b transcription factor [Nicotiana tabacum]
gi|316930967|gb|ADU60100.1| MYC2a transcription factor [Nicotiana tabacum]
Length = 679
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q
Sbjct: 500 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKLKLQ 549
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 282 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 341
Query: 104 MMN 106
++
Sbjct: 342 FLS 344
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
R+RR +I+++++ L+KLVP +K D ASMLDE I ++K L+ QVQ++ V N
Sbjct: 394 RQRRKKISERVRELEKLVPGGNKLDTASMLDEAIRFVKFLQIQVQLLEAVGNG 446
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 38/48 (79%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
+RRR +IN+++K LQ+LVP SK+++AS LD+ I Y+K L+ QVQ M+
Sbjct: 223 QRRRHKINERLKTLQQLVPGCSKSNQASTLDQTIHYMKSLQHQVQAMS 270
>gi|328687821|gb|AEB35522.1| MYC2 [Lactuca saligna]
gi|328687823|gb|AEB35523.1| MYC2 [Lactuca saligna]
gi|328687825|gb|AEB35524.1| MYC2 [Lactuca saligna]
gi|328687827|gb|AEB35525.1| MYC2 [Lactuca saligna]
gi|328687829|gb|AEB35526.1| MYC2 [Lactuca saligna]
gi|328687831|gb|AEB35527.1| MYC2 [Lactuca saligna]
gi|328687833|gb|AEB35528.1| MYC2 [Lactuca saligna]
gi|328687835|gb|AEB35529.1| MYC2 [Lactuca saligna]
gi|328687837|gb|AEB35530.1| MYC2 [Lactuca saligna]
gi|328687839|gb|AEB35531.1| MYC2 [Lactuca saligna]
gi|328687841|gb|AEB35532.1| MYC2 [Lactuca saligna]
gi|328687843|gb|AEB35533.1| MYC2 [Lactuca saligna]
gi|328687845|gb|AEB35534.1| MYC2 [Lactuca saligna]
gi|328687847|gb|AEB35535.1| MYC2 [Lactuca saligna]
gi|328687849|gb|AEB35536.1| MYC2 [Lactuca saligna]
gi|328687851|gb|AEB35537.1| MYC2 [Lactuca saligna]
gi|328687853|gb|AEB35538.1| MYC2 [Lactuca saligna]
gi|328687855|gb|AEB35539.1| MYC2 [Lactuca saligna]
gi|328687857|gb|AEB35540.1| MYC2 [Lactuca saligna]
gi|328687859|gb|AEB35541.1| MYC2 [Lactuca saligna]
gi|328687861|gb|AEB35542.1| MYC2 [Lactuca saligna]
gi|328687863|gb|AEB35543.1| MYC2 [Lactuca saligna]
gi|328687865|gb|AEB35544.1| MYC2 [Lactuca saligna]
gi|328687867|gb|AEB35545.1| MYC2 [Lactuca saligna]
gi|328687869|gb|AEB35546.1| MYC2 [Lactuca saligna]
gi|328687871|gb|AEB35547.1| MYC2 [Lactuca saligna]
gi|328687873|gb|AEB35548.1| MYC2 [Lactuca saligna]
Length = 317
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 12 SLKTKTTDEDSASHGR---SENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S ++K +DE A R + DE K GR ++ R H ++ER+RR+++NQ+
Sbjct: 163 SRESKISDEAPARDEREAITTILDEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQR 221
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
AL+ +VPN SK DKAS+L + I Y+ L+ +V+ M + R
Sbjct: 222 FYALRAVVPNISKMDKASLLGDAITYITDLQKKVKEMESER 262
>gi|327194899|gb|AEA34965.1| putative transcription factor BHLH2 [Ipomoea batatas]
Length = 667
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 52 AVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
A H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R +
Sbjct: 471 ANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGS 530
Query: 112 MPQMN 116
+++
Sbjct: 531 AWEVD 535
>gi|296086734|emb|CBI32369.3| unnamed protein product [Vitis vinifera]
Length = 620
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S +S + D + G + + +A H +ERRRR+++N++
Sbjct: 376 SVPFLHTKYRDENSP---KSRDGDSAGRFRKG----TPQDELSANHVLAERRRREKLNER 428
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
L+ LVP +K DKAS+L + I+Y+KQL+ ++Q
Sbjct: 429 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 463
>gi|2943789|dbj|BAA25078.1| RD22BP1 [Arabidopsis thaliana]
Length = 623
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 33 EDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
E K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I
Sbjct: 433 EKRPKKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAI 491
Query: 93 DYLKQLKAQV 102
Y+ +LK++V
Sbjct: 492 AYINELKSKV 501
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 433
Query: 104 MM 105
+
Sbjct: 434 FL 435
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++
Sbjct: 114 RHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKKQIRLL 160
>gi|218478035|dbj|BAH03388.1| bHLH transcriptional factor [Gentiana triflora]
gi|218478037|dbj|BAH03387.1| bHLH transcriptional factor [Gentiana triflora]
Length = 661
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 51 AAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
A H SERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q +
Sbjct: 474 GANHVLSERRRREKLNERFITLRSLVPFVTKMDKASVLGDTIEYVKQLRKKIQEL 528
>gi|122934777|gb|ABM68352.1| Rc protein [Oryza sativa Indica Group]
Length = 634
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 33 EDHETKTGRSHSSKRRRTA------AVHNQSERRRRDRINQKMKALQKLVPNASKTDKAS 86
E E++ G+ S R+ A A H ERRRR+++N+K L+ LVP +K DKAS
Sbjct: 425 ETPESRGGKGASGMRKVGAIQGDFSANHVLKERRRREKLNEKFIILRSLVPFMTKMDKAS 484
Query: 87 MLDEVIDYLKQLKAQVQ 103
+L + I+Y+KQL+ ++Q
Sbjct: 485 ILGDTIEYVKQLRNRIQ 501
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
H+ +ER RR++I ++MK LQ LVP SK T KA MLDE+I+Y++ L+ QV++
Sbjct: 267 HSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEV 318
>gi|388492758|gb|AFK34445.1| unknown [Lotus japonicus]
Length = 324
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 19 DEDSASHGRSENQDEDH---------ETKT--GRSHSSKRRRTAAVHNQSERRRRDRINQ 67
DE++ G EN ED ETK G+S R + SERRRR R+ +
Sbjct: 96 DEEAKWGGEEENDGEDSSSAGTTSTMETKIVNGKSRPKTDRSKTLI---SERRRRGRMKE 152
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
K+ AL+ LVPN +K DKAS++ + + Y+ L+AQ + +
Sbjct: 153 KLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKL 190
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 11/98 (11%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETK----TGRSHSSKRRRTAAVHNQS--ERRRRDRINQ 67
++ D+D G + ED +K G++ +S R AA QS R+RR+RIN+
Sbjct: 235 ESNCADQDGG--GEDSSSKEDDASKALNLNGKTRAS---RGAATDPQSLYARKRRERINE 289
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
+++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 290 RLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 327
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 433
Query: 104 MM 105
+
Sbjct: 434 FL 435
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 270 RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|125554507|gb|EAZ00113.1| hypothetical protein OsI_22119 [Oryza sativa Indica Group]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
R RR+R++Q+M+ALQ+LVP ++ D ASML+E I Y+K LK VQ
Sbjct: 131 RLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQ 175
>gi|225436998|ref|XP_002277508.1| PREDICTED: transcription factor TT8 [Vitis vinifera]
Length = 696
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S +S + D + G + + +A H +ERRRR+++N++
Sbjct: 452 SVPFLHTKYRDENSP---KSRDGDSAGRFRKG----TPQDELSANHVLAERRRREKLNER 504
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
L+ LVP +K DKAS+L + I+Y+KQL+ ++Q
Sbjct: 505 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 539
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 16 KTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQK 74
+ T D++ +NQ D+ H RR A H+ +ER RR++I+++MK LQ
Sbjct: 170 RETSADTSKGSEVQNQKPDY------IHVRARRGQATDSHSLAERVRREKISERMKYLQD 223
Query: 75 LVPNASKT-DKASMLDEVIDYLKQLKAQVQMM 105
L+P +K KA MLDE+I+Y++ L+ QV+ +
Sbjct: 224 LIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|184161316|gb|ACC68685.1| bHLH-like DNA binding protein [Vitis vinifera]
Length = 701
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S +S + D + G + + +A H +ERRRR+++N++
Sbjct: 457 SVPFLHTKYRDENSP---KSRDGDSAGRFRKG----TPQDELSANHVLAERRRREKLNER 509
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
L+ LVP +K DKAS+L + I+Y+KQL+ ++Q
Sbjct: 510 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 544
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 104 MMN 106
++
Sbjct: 314 FLS 316
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 128 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 187
Query: 105 MN 106
++
Sbjct: 188 LS 189
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 128 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 187
Query: 105 MN 106
++
Sbjct: 188 LS 189
>gi|356568194|ref|XP_003552298.1| PREDICTED: transcription factor bHLH51-like [Glycine max]
Length = 261
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L VID +K LK
Sbjct: 77 HSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLK 122
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 13/105 (12%)
Query: 33 EDHET-KTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLD 89
++HE K GR S+ + A QS R+RR+RIN++++ LQ LVPN +K D ++ML+
Sbjct: 185 KEHEAPKLGRK--SRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKVDISTMLE 242
Query: 90 EVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---GMQQQLQMSL 131
E + Y+K L+ Q++++++ M M P+ GM L +S
Sbjct: 243 EAVQYVKFLQLQIKLLSS-----EDMWMYAPIAYNGMNIGLDLSF 282
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 38 KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
K G H R A H+ +E+ RR++I+++MK LQ LVP SK T KA MLDE+I+Y+
Sbjct: 142 KEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYV 201
Query: 96 KQLKAQVQMMN 106
+ L+ QV+ ++
Sbjct: 202 QSLQRQVEFLS 212
>gi|302398591|gb|ADL36590.1| BHLH domain class transcription factor [Malus x domestica]
Length = 502
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR S+ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 336 DEQKPRKRGRKPSNGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 394
Query: 92 IDYLKQLKAQV-------QMMNNVRNNMP 113
I ++ L+ ++ QM+NN +P
Sbjct: 395 ITHITDLQTKIRVIETEKQMVNNKGKQLP 423
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 187 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVE 246
Query: 104 MMN 106
++
Sbjct: 247 FLS 249
>gi|255627555|gb|ACU14122.1| unknown [Glycine max]
Length = 253
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L V+D++K LK
Sbjct: 77 HSQAEKRRRDRINAQLATLRKLIPMSDKMDKATLLGSVVDHVKDLK 122
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 140 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 199
Query: 105 MN 106
++
Sbjct: 200 LS 201
>gi|328688133|gb|AEB35678.1| MYC2 [Helianthus annuus]
Length = 155
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAA--------A 157
+RN + + + + Q+ ++MS + G L + ++ + M A
Sbjct: 71 LRNQIDALKKELSNKVSAQENMKMSSITTRGPPADLDVDVKVIGWDAMIRVQCNKKSHPA 130
Query: 158 ATARTAPQSLPPPIYSPAASVT 179
A RTA L ++ + SV
Sbjct: 131 ARLRTAMMELDLEVHHASVSVV 152
>gi|324983879|gb|ADY68776.1| inducer of CBF expression 1 protein [Eucalyptus camaldulensis]
Length = 523
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
EDS G + N + T T K++ A + +ERRRR ++N ++ L+ +VP +
Sbjct: 306 EDSKHEGCNSNANS---TVTVGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPRS 362
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMP 120
++ D+AS+ E IDYLK++ ++ ++N ++ P M+ P
Sbjct: 363 ARMDRASIFGEAIDYLKEVCKRINNLHNELDSTPPGTMLPP 403
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP+ +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 34 ARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQVE 93
Query: 104 MMN 106
++
Sbjct: 94 FLS 96
>gi|328687937|gb|AEB35580.1| MYC2 [Helianthus exilis]
gi|328687939|gb|AEB35581.1| MYC2 [Helianthus exilis]
gi|328687941|gb|AEB35582.1| MYC2 [Helianthus exilis]
gi|328687943|gb|AEB35583.1| MYC2 [Helianthus exilis]
Length = 155
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
+RN + + + + +Q+ ++MS + G L + ++ + M ++ P
Sbjct: 71 LRNQIDALKKELSNKVSVQENMKMSSITTRGPPADLDVDVKVIGWDAMIRVQCNKKSHP 129
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 254 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 313
Query: 104 MMN 106
++
Sbjct: 314 FLS 316
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 292 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVRSLQRQVE 351
Query: 104 MM 105
+
Sbjct: 352 FL 353
>gi|356548045|ref|XP_003542414.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 478
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 12 SLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKA 71
+L +EDS+S + DE K GR ++ R H ++ER+RR+++NQ+ A
Sbjct: 293 TLGVNLGNEDSSSI----HADERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYA 347
Query: 72 LQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN 110
L+ +VPN SK DKAS+L + I ++ L+ +++++ +N
Sbjct: 348 LRAVVPNISKMDKASLLGDAITFITDLQMKIKVLEAEKN 386
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+RI++K++ LQ+LVP +K D ASMLDE I Y+K LK Q++++
Sbjct: 125 RLRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 171
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 47 RRRTAAVHNQ----SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
RRR + + + R+RR+RI+++++ LQKLVP +K D ASMLDE YL+ L++QV
Sbjct: 314 RRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAASYLRFLQSQV 373
Query: 103 QMMNNV 108
+ + +
Sbjct: 374 RELQTL 379
>gi|389827986|gb|AFL02463.1| transcription factor bHLH3 [Fragaria x ananassa]
Length = 697
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 9 SLKSLKTKTTDEDS--ASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRIN 66
S+ L TK DE+S +SH D E T + + +A H +ERRRR+++N
Sbjct: 436 SVPFLHTKYRDENSPKSSH--------DGEGSTRLRKGTSQDELSANHVLAERRRREKLN 487
Query: 67 QKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
++ L+ LVP +K DKAS+L + I+Y+KQL+ +++
Sbjct: 488 ERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIK 524
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 15 TKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQ 73
+ +DE S SE +D+ H RR A H+ +ER RR++I+++MK LQ
Sbjct: 96 SNNSDEQSTKPSESEPPKQDY------IHVRARRGQATDSHSIAERARREKISERMKILQ 149
Query: 74 KLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN------NVRNNMPQMNMMMP 120
LVP +K KA +LDE+I+Y++ L+ QV+ ++ N R NM N P
Sbjct: 150 DLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRANMNPTNEGFP 203
>gi|223702422|gb|ACN21642.1| putative basic helix-loop-helix protein BHLH20 [Lotus japonicus]
Length = 324
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 19 DEDSASHGRSENQDEDH---------ETKT--GRSHSSKRRRTAAVHNQSERRRRDRINQ 67
DE++ G EN ED ETK G+S R + SERRRR R+ +
Sbjct: 96 DEEAKWGGEEENDGEDSSSAGTTSTMETKIVNGKSRPKTDRSKTLI---SERRRRGRMKE 152
Query: 68 KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
K+ AL+ LVPN +K DKAS++ + + Y+ L+AQ + +
Sbjct: 153 KLYALRALVPNITKMDKASIIGDAVSYVYDLQAQAKKL 190
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR++IN+++K+LQ LVPN +K D +MLDE I Y+K L+ QV+++
Sbjct: 12 RHRREKINERLKSLQNLVPNGAKVDIVTMLDEAIHYVKFLQNQVELL 58
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 16 KTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQK 74
+ T D++ +NQ D+ H RR A H+ +ER RR++I+++MK LQ
Sbjct: 170 RETSADTSKGSEVQNQKPDY------IHVRARRGQATDSHSLAERVRREKISERMKYLQD 223
Query: 75 LVPNASKT-DKASMLDEVIDYLKQLKAQVQMM 105
L+P +K KA MLDE+I+Y++ L+ QV+ +
Sbjct: 224 LIPGCNKVAGKAGMLDEIINYVQSLQRQVEFL 255
>gi|302028371|gb|ADK91082.1| LMYC2 [Hevea brasiliensis]
Length = 475
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 34 DHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVID 93
D K GR+ + + T + ++ER+RR+R+N + AL+ +VPN SK DKAS+L + +
Sbjct: 287 DRLKKRGRAQLNGKELTLN-YVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVT 345
Query: 94 YLKQLKAQV 102
Y+K+LKA+V
Sbjct: 346 YIKELKAKV 354
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 185 HSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQVEFLS 238
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 242 ARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 301
Query: 104 MM 105
+
Sbjct: 302 FL 303
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 39 TGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
+G++ +SK AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K
Sbjct: 221 SGKTRASK---GAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVK 277
Query: 97 QLKAQVQMM 105
L+ Q++++
Sbjct: 278 FLQLQIKLL 286
>gi|334200176|gb|AEG74015.1| lMYC5 [Hevea brasiliensis]
Length = 475
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR R+N + AL+ +VPN SK DKAS+L + + Y+++LKA+V
Sbjct: 304 HVEAERQRRKRLNHRFYALRSVVPNVSKMDKASLLADAVTYIEELKAKV 352
>gi|242040107|ref|XP_002467448.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
gi|241921302|gb|EER94446.1| hypothetical protein SORBIDRAFT_01g028230 [Sorghum bicolor]
Length = 709
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 43/59 (72%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++ + + ++ +
Sbjct: 532 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTSLESDKDTL 590
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 105 MN 106
++
Sbjct: 204 LS 205
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 105 MN 106
++
Sbjct: 204 LS 205
>gi|68342448|gb|AAY90122.1| basic helix-loop-helix transcription factor protein [Rheum
australe]
Length = 720
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I ++ +LK+++Q
Sbjct: 529 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISFINELKSKLQ 578
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR +I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 140 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVE 199
Query: 104 MM 105
+
Sbjct: 200 FL 201
>gi|163311842|gb|ABY26934.1| putative anthocyanin transcriptional regulator [Ipomoea lacunosa]
Length = 669
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R
Sbjct: 475 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGGAW 534
Query: 114 QMN 116
+++
Sbjct: 535 EVD 537
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 265 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 324
Query: 104 MM 105
+
Sbjct: 325 FL 326
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 105 MN 106
++
Sbjct: 204 LS 205
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 270 RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328
>gi|297823945|ref|XP_002879855.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325694|gb|EFH56114.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 253
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H Q+E+RRR RIN + AL+KLVPN+ K DKA++L VI+ +K+LK
Sbjct: 66 HRQAEKRRRGRINSHLTALRKLVPNSDKLDKAALLASVIEQVKELK 111
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 105 MN 106
++
Sbjct: 204 LS 205
>gi|329750801|gb|AEC03343.1| bHLH transcription factor MYC1 [Diospyros kaki]
Length = 719
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 28 SENQDEDHETKTGRSHSSKRRRT-------AAVHNQSERRRRDRINQKMKALQKLVPNAS 80
S+N+D++ + S+ R R +A H +ERRRR+++N++ L+ LVP +
Sbjct: 467 SKNRDDNSPKSRYATDSTSRFRKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVT 526
Query: 81 KTDKASMLDEVIDYLKQLKAQVQ 103
K DKAS+L + I+Y+KQL++++Q
Sbjct: 527 KMDKASILGDTIEYVKQLRSKIQ 549
>gi|357482425|ref|XP_003611499.1| Transcription factor bHLH25 [Medicago truncatula]
gi|355512834|gb|AES94457.1| Transcription factor bHLH25 [Medicago truncatula]
Length = 334
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 49 RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN-- 106
R A H +ER+RR++I+QK AL L+P+ K DKAS+L + I+++KQL+ +V+++
Sbjct: 145 RNAQDHIIAERKRREKISQKFIALSALLPDLKKMDKASVLGDAINHVKQLQEKVKLLEEK 204
Query: 107 NVRNNMPQMNMM 118
N +NN+ ++M+
Sbjct: 205 NQKNNVESVSMV 216
>gi|15237502|ref|NP_199488.1| transcription factor ATR2 [Arabidopsis thaliana]
gi|75309118|sp|Q9FIP9.1|ATR2_ARATH RecName: Full=Transcription factor ATR2; AltName: Full=Basic
helix-loop-helix protein 5; Short=AtbHLH5; Short=bHLH 5;
AltName: Full=Protein ALTERED TRYPTOPHAN REGULATION 2;
AltName: Full=Transcription factor EN 36; AltName:
Full=Transcription factor MYC3; AltName: Full=bHLH
transcription factor bHLH005
gi|9758512|dbj|BAB08920.1| bHLH protein-like [Arabidopsis thaliana]
gi|332008039|gb|AED95422.1| transcription factor ATR2 [Arabidopsis thaliana]
Length = 592
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 465
>gi|449461491|ref|XP_004148475.1| PREDICTED: transcription factor MYC2-like [Cucumis sativus]
Length = 688
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++Q
Sbjct: 504 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQ 553
>gi|225440087|ref|XP_002282625.1| PREDICTED: transcription factor bHLH106 [Vitis vinifera]
gi|297741653|emb|CBI32785.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 47 RRRTAAV-HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ---V 102
R TA++ H ++E+RRR+RIN + L+ L+P +SKTDKAS+L +VI +K+LK Q +
Sbjct: 61 RALTASINHKEAEKRRRERINSHLDKLRSLLPCSSKTDKASLLAKVIQRVKELKEQTSEI 120
Query: 103 QMMNNVRNNMPQMNMMM 119
+ + + ++N+++
Sbjct: 121 TQLETLPSETDEINVIL 137
>gi|147772652|emb|CAN62848.1| hypothetical protein VITISV_010152 [Vitis vinifera]
Length = 668
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 7/95 (7%)
Query: 9 SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQK 68
S+ L TK DE+S +S + D + G + + +A H +ERRRR+++N++
Sbjct: 424 SVPFLHTKYRDENSP---KSRDGDSAGRFRKG----TPQDELSANHVLAERRRREKLNER 476
Query: 69 MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
L+ LVP +K DKAS+L + I+Y+KQL+ ++Q
Sbjct: 477 FIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQ 511
>gi|449531709|ref|XP_004172828.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13-like
[Cucumis sativus]
Length = 621
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ +V++M
Sbjct: 451 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQEKVKVM 502
>gi|297810265|ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318853|gb|EFH49275.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 898
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 35 HETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
H+++TG + S+ T + QS R RR RI+++ K LQ +VP +K D SML+E I
Sbjct: 27 HKSETGNTKRSRSTSTLSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAI 86
Query: 93 DYLKQLKAQVQMMNN 107
Y+K LKAQ+ N
Sbjct: 87 RYVKFLKAQIWFHQN 101
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 267 RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 325
>gi|18026958|gb|AAL55712.1|AF251690_1 putative transcription factor BHLH5 [Arabidopsis thaliana]
Length = 592
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 465
>gi|449432042|ref|XP_004133809.1| PREDICTED: transcription factor bHLH13-like [Cucumis sativus]
Length = 621
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 42/56 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ +V++M R
Sbjct: 451 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQEKVKVMEFER 506
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+++MK LQ LVP SK T KA MLDE+I+Y++ L+
Sbjct: 32 HVRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQR 91
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 92 QVEFLS 97
>gi|15225658|ref|NP_181549.1| transcription factor bHLH51 [Arabidopsis thaliana]
gi|75315012|sp|Q9XEF0.1|BH051_ARATH RecName: Full=Transcription factor bHLH51; AltName: Full=Basic
helix-loop-helix protein 51; Short=AtbHLH51; Short=bHLH
51; AltName: Full=Transcription factor EN 57; AltName:
Full=bHLH transcription factor bHLH051
gi|4587994|gb|AAD25935.1|AF085279_8 hypothetical protein [Arabidopsis thaliana]
gi|20127047|gb|AAM10943.1|AF488586_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|124300966|gb|ABN04735.1| At2g40200 [Arabidopsis thaliana]
gi|124301074|gb|ABN04789.1| At2g40200 [Arabidopsis thaliana]
gi|225898581|dbj|BAH30421.1| hypothetical protein [Arabidopsis thaliana]
gi|330254701|gb|AEC09795.1| transcription factor bHLH51 [Arabidopsis thaliana]
Length = 254
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H +E+RRRDRIN + AL+KLVPN+ K DKA++L VI+ +K+LK
Sbjct: 67 HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELK 112
>gi|357485243|ref|XP_003612909.1| BHLH transcription factor [Medicago truncatula]
gi|355514244|gb|AES95867.1| BHLH transcription factor [Medicago truncatula]
Length = 677
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK ++Q
Sbjct: 494 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKTKLQ 543
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
RR A H+ +ER RR++I++KMK LQ +VP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203
Query: 105 MN 106
++
Sbjct: 204 LS 205
>gi|225427201|ref|XP_002280253.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
Length = 663
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++Q
Sbjct: 482 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRTKLQ 531
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR +I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 140 AKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVE 199
Query: 104 MM 105
+
Sbjct: 200 FL 201
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR++IN+++K LQ LVPN +K D +MLDE I Y+K L+ QV+++
Sbjct: 12 RHRREKINERLKNLQNLVPNGAKVDIVTMLDEAIHYVKFLQTQVELL 58
>gi|449519422|ref|XP_004166734.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor MYC4-like
[Cucumis sativus]
Length = 686
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++Q
Sbjct: 502 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLQ 551
>gi|297848442|ref|XP_002892102.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
gi|297337944|gb|EFH68361.1| hypothetical protein ARALYDRAFT_333565 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 47 RRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R + + S+RRR D + KM+ LQ+LVP+ KTDK S+LD I+Y+K L+ Q ++M
Sbjct: 119 REVPSVIRKGSKRRRSDELCNKMRTLQQLVPDCHKTDKVSVLDNAIEYMKSLQLQFKVM 177
>gi|255555757|ref|XP_002518914.1| DNA binding protein, putative [Ricinus communis]
gi|223541901|gb|EEF43447.1| DNA binding protein, putative [Ricinus communis]
Length = 479
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ +VPN SK DKAS+L + + Y+++LKA+V
Sbjct: 306 HVEAERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELKAKV 354
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 158 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 217
Query: 104 MMN 106
++
Sbjct: 218 FLS 220
>gi|326527479|dbj|BAK08014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 618
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R
Sbjct: 465 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITDLQKKLKDMETERERFL 524
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 525 ESGMVDP 531
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 272 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 331
Query: 104 MMN 106
++
Sbjct: 332 FLS 334
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 388 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 447
Query: 104 MM 105
+
Sbjct: 448 FL 449
>gi|297800296|ref|XP_002868032.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313868|gb|EFH44291.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 598
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 426 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 475
>gi|356536812|ref|XP_003536928.1| PREDICTED: transcription factor bHLH3-like [Glycine max]
Length = 504
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
+EDS+S + DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN
Sbjct: 327 NEDSSSI----HADERKPKKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPN 381
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMMN---NVRNNMPQ 114
SK DKAS+L + I ++ L+ +++++ N+ NN Q
Sbjct: 382 ISKMDKASLLGDAITFITDLQMKIKVLEAEKNMGNNKDQ 420
>gi|301072754|gb|ADK56287.1| LMYC1 [Hevea brasiliensis]
Length = 476
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ VPN SK DKAS+L + + Y+K+LKA V
Sbjct: 307 HVEAERQRRERLNHRFYALRSAVPNVSKMDKASLLADAVTYIKELKATV 355
>gi|242090023|ref|XP_002440844.1| hypothetical protein SORBIDRAFT_09g008120 [Sorghum bicolor]
gi|241946129|gb|EES19274.1| hypothetical protein SORBIDRAFT_09g008120 [Sorghum bicolor]
Length = 587
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 32 DEDHETKTGRSHSSK----RRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASM 87
DE+ E + R K R H ++ER+RR+++N++ AL+ +VPN SK DKAS+
Sbjct: 416 DEEREGRQPRKRERKPTNGREEPPLSHVEAERQRREKLNKRFCALRAIVPNISKMDKASI 475
Query: 88 LDEVIDYLKQLKAQVQMMNNVRNNMPQ 114
L++ + ++ LK +++ + R+ +P+
Sbjct: 476 LEDAVMHIGDLKKKLEKLEAERDQLPE 502
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 42 SHSSKRRRTAAVHNQ----SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
S S RR+ + + + R RR+R++++++ LQ+LVP S+ D ASMLDE YLK
Sbjct: 279 SQSKPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSRMDTASMLDEAASYLKF 338
Query: 98 LKAQVQMM 105
LK QV+ +
Sbjct: 339 LKTQVKAL 346
>gi|449519754|ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 38 KTGRSHSSK---RRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDY 94
KTG+ K + A H ++ER+RR+++N + AL+ +VPN S+ DKAS+L + + Y
Sbjct: 233 KTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSY 292
Query: 95 LKQLKAQVQMM 105
+ LKA+V+ M
Sbjct: 293 INALKAKVEEM 303
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 387 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 446
Query: 104 MM 105
+
Sbjct: 447 FL 448
>gi|342298424|emb|CBY05402.1| INDEHISCENT-like protein [Lepidium appelianum]
Length = 172
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
RRRR+RI++K++ L+++VP +K D ASMLDE I Y K LK QV+M+
Sbjct: 101 RRRRERISEKIRILKRIVPGGAKMDSASMLDEAIRYTKFLKRQVRML 147
>gi|328687933|gb|AEB35578.1| MYC2 [Helianthus exilis]
gi|328687935|gb|AEB35579.1| MYC2 [Helianthus exilis]
Length = 155
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
+RN + + + + +Q+ ++MS + G L + ++ + M ++ P
Sbjct: 71 LRNQIDALKKELSNKVSVQENMKMSSITTRGPPADLEVDVKVIGWDAMIRVQCNKKSHP 129
>gi|224140002|ref|XP_002323376.1| predicted protein [Populus trichocarpa]
gi|222868006|gb|EEF05137.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 48 RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
++T V H +ER+RR+ +N K AL+ LVPN SK D+AS++ E IDY+K+L VQ +
Sbjct: 254 KKTGKVTKHFATERQRREHLNGKYTALRNLVPNPSKNDRASVVGEAIDYIKELLRTVQEL 313
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGRS--------HSSKRRRTAA-VHNQSERRR 61
KS +T +D+D+A EN ++ + H RR A H+ +ER R
Sbjct: 328 KSDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVRARRGQATDSHSLAERVR 387
Query: 62 RDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
R++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 388 REKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 432
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 360 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 419
Query: 104 MM 105
+
Sbjct: 420 FL 421
>gi|224072329|ref|XP_002303693.1| predicted protein [Populus trichocarpa]
gi|222841125|gb|EEE78672.1| predicted protein [Populus trichocarpa]
Length = 465
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 39/49 (79%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
H ++ER+RR+R+N + AL+ +VPN SK D+AS+L + ++Y+K+LK +V
Sbjct: 290 HVEAERQRRERLNHRFYALRSVVPNVSKMDRASLLADAVNYIKELKRKV 338
>gi|2335192|gb|AAB72192.1| bHLH protein [Arabidopsis thaliana]
Length = 597
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 46 KRRRTAAVHNQ--------SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQ 97
K+RR H + SE++RR+++N++ L+ ++P+ SK DK S+LD+ I+YL+
Sbjct: 391 KKRRVVTGHTRGKPGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQD 450
Query: 98 LKAQVQMMNNVR 109
L+ +VQ + + R
Sbjct: 451 LQKRVQELESCR 462
>gi|1142619|gb|AAB00686.1| phaseolin G-box binding protein PG1 [Phaseolus vulgaris]
Length = 642
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 43/59 (72%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LK+++ + + + +
Sbjct: 463 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLSELESEKGEL 521
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN +MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 156 AKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 215
Query: 104 MM 105
+
Sbjct: 216 FL 217
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNA 79
S S E E + + + ++ R A QS R+RR+RIN++++ LQ LVPN
Sbjct: 173 SGSCTSEEGNFEGNTYSSAKKTCTRASRGGATDPQSLYARKRRERINERLRILQNLVPNG 232
Query: 80 SKTDKASMLDEVIDYLKQLKAQVQMMNN 107
+K D ++ML+E Y+K L+ Q++++++
Sbjct: 233 TKVDISTMLEEAAQYVKFLQLQIKLLSS 260
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ +M M
Sbjct: 237 RKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLSS-----DEMWMY 291
Query: 119 MPL---GMQQQLQMSL 131
P+ GM + ++L
Sbjct: 292 APIAYNGMNIGIDLNL 307
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 8 ARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQVE 67
Query: 104 MMN 106
++
Sbjct: 68 FLS 70
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 206 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 265
Query: 104 MMN 106
++
Sbjct: 266 FLS 268
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 158 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 217
Query: 104 MMN 106
++
Sbjct: 218 FLS 220
>gi|255564675|ref|XP_002523332.1| DNA binding protein, putative [Ricinus communis]
gi|223537420|gb|EEF39048.1| DNA binding protein, putative [Ricinus communis]
Length = 615
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+A+++ M
Sbjct: 447 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKSM 498
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 281 ARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVE 340
Query: 104 MMN 106
++
Sbjct: 341 FLS 343
>gi|449445714|ref|XP_004140617.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
Length = 431
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 38 KTGRSHSSK---RRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDY 94
KTG+ K + A H ++ER+RR+++N + AL+ +VPN S+ DKAS+L + + Y
Sbjct: 233 KTGQKRGRKPNMSKENAMNHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAVSY 292
Query: 95 LKQLKAQVQMM 105
+ LKA+V+ M
Sbjct: 293 INALKAKVEEM 303
>gi|356501175|ref|XP_003519403.1| PREDICTED: transcription factor bHLH51-like [Glycine max]
Length = 266
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L V+D++K LK
Sbjct: 77 HSQAEKRRRDRINAQLATLRKLIPMSDKMDKAALLGSVVDHVKDLK 122
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ +M M
Sbjct: 237 RKRRERINERLKILQNLVPNGTKVDISTMLEEAMHYVKFLQLQIKLLSS-----DEMWMY 291
Query: 119 MPL---GMQQQLQMSL 131
P+ GM + ++L
Sbjct: 292 APIAYNGMNIGIDLNL 307
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 48 RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
+R A H +S ER RR RI+++++ LQ+LVPN K T+ A MLD +DY+K L+ QV+
Sbjct: 72 KRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKG 131
Query: 105 MNNVRNNM 112
+N+ R N
Sbjct: 132 LNDSRANC 139
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 355 ARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 414
Query: 104 MM 105
+
Sbjct: 415 FL 416
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 16/83 (19%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ M M
Sbjct: 303 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDMWMY 357
Query: 119 MPLGMQQQLQMSLLARMGMGVGL 141
P +A GM +GL
Sbjct: 358 AP-----------IAYNGMDIGL 369
>gi|224138924|ref|XP_002326724.1| predicted protein [Populus trichocarpa]
gi|222834046|gb|EEE72523.1| predicted protein [Populus trichocarpa]
Length = 638
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++Q
Sbjct: 463 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIDELRTKLQ 512
>gi|163311834|gb|ABY26930.1| putative anthocyanin transcriptional regulator [Ipomoea alba]
Length = 671
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVR 109
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R
Sbjct: 474 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAAR 529
>gi|388521495|gb|AFK48809.1| unknown [Lotus japonicus]
Length = 255
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H+Q+E+RRRDRIN ++ L+KL+P + K D A++L V+D++K LK + ++ + +P
Sbjct: 75 HSQAEKRRRDRINAQLATLRKLIPKSDKMDMAALLGSVVDHVKDLKRKAIDVSKASSTIP 134
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 16/83 (19%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ M M
Sbjct: 303 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDMWMY 357
Query: 119 MPLGMQQQLQMSLLARMGMGVGL 141
P +A GM +GL
Sbjct: 358 AP-----------IAYNGMDIGL 369
>gi|357147532|ref|XP_003574381.1| PREDICTED: transcription factor MYC4-like [Brachypodium distachyon]
Length = 706
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
+E K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 509 EEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 567
Query: 92 IDYLKQLKAQVQMMNNVRNNM 112
I Y+ +L+ ++ + + ++ +
Sbjct: 568 ISYINELRGKMTALESDKDTL 588
>gi|356502412|ref|XP_003520013.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 374
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 41/57 (71%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRN 110
H ++ER+RR+++NQ+ L+ VPN SK DKAS+L + +DY+ +LKA++ + + N
Sbjct: 224 HVEAERQRREKLNQRFYTLRSAVPNVSKMDKASLLLDAVDYINELKAKINHLESSAN 280
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 10 LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRI 65
LK KT +D D ++ G + ED E + + K R R AA QS R+RR+RI
Sbjct: 201 LKPQKTCCSD-DESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERI 259
Query: 66 NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
N++++ LQ LVPN +K ++ML+E + Y+K L+ Q++++
Sbjct: 260 NERLRILQHLVPNGTKVHISTMLEEAVQYVKFLQLQIKLL 299
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 49 RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 211 RGAATDPQSIYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 269
>gi|224066289|ref|XP_002302066.1| predicted protein [Populus trichocarpa]
gi|222843792|gb|EEE81339.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 32 DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
DE K GR ++ R H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L +
Sbjct: 308 DERKPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 366
Query: 92 IDYLKQLKAQVQMMNN----VRNNMPQM 115
I Y+ L+ ++ + V NN Q+
Sbjct: 367 ITYITDLQKKIGALETERGVVNNNQKQL 394
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 124 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAVMLDEIINYVQALQCQVE 183
Query: 104 MMN 106
++
Sbjct: 184 FLS 186
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 374 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 433
Query: 104 MM 105
+
Sbjct: 434 FL 435
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 36 ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
E T H RR A H+ +ER RR++I+++M+ LQ LVP K T KA MLDE+I+
Sbjct: 128 EPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIIN 187
Query: 94 YLKQLKAQVQMM 105
Y++ L+ QV+ +
Sbjct: 188 YVQTLQTQVEFL 199
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Query: 14 KTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKAL 72
K T+E SA+ ED T+ G H RR A H+ +ER RR+RI+++M+ L
Sbjct: 118 KEANTEEKSAT--------EDEATR-GYIHVRARRGQATDSHSLAERVRRERISERMRML 168
Query: 73 QKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
Q LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 169 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 203
>gi|297794559|ref|XP_002865164.1| hypothetical protein ARALYDRAFT_916752 [Arabidopsis lyrata subsp.
lyrata]
gi|297310999|gb|EFH41423.1| hypothetical protein ARALYDRAFT_916752 [Arabidopsis lyrata subsp.
lyrata]
Length = 610
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 434 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 483
>gi|224098710|ref|XP_002311240.1| predicted protein [Populus trichocarpa]
gi|222851060|gb|EEE88607.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H+Q+E+RRRDRIN ++ L+KL+P + K DKA++L ID++K LK
Sbjct: 71 HSQAEKRRRDRINAQLGILRKLIPKSEKMDKAALLGSAIDHVKDLK 116
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267
Query: 104 MM 105
+
Sbjct: 268 FL 269
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Query: 22 SASHGRSENQDEDHETKTGRSHSS------KRRRTAAVHNQS--ERRRRDRINQKMKALQ 73
++S ++ +E E G + SS + R +A QS R+RR+RIN++++ LQ
Sbjct: 218 TSSFSSEDDCNEAQENNGGITSSSTSNGKPRASRGSATDPQSLYARKRRERINERLRILQ 277
Query: 74 KLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 278 SLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 309
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 38/47 (80%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
++RR+RIN+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 254 KKRRERINERLKILQSLVPNGTKVDISTMLEEAVQYVKFLQVQIKLL 300
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN ++K LQ LVPN +K D ++ML++ + Y+K L+ Q++++++ +++ ++
Sbjct: 149 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS--DDLWMYALL 206
Query: 119 MPLGMQQQLQMSLLARM 135
G+ L ++L+R+
Sbjct: 207 AHNGLNMGLHHNILSRL 223
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRRRTAAV---HNQSERRRRDRINQKMKALQKLVPN 78
SAS + Q ED+ + R R+ H+ +ER RR++I+++MK LQ LVP
Sbjct: 239 SASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPG 298
Query: 79 ASKT-DKASMLDEVIDYLKQLKAQVQMM 105
SK KA MLDE+I+Y++ L+ QV+ +
Sbjct: 299 CSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 14/110 (12%)
Query: 11 KSLKTKTTDEDSASHGRSENQ---DEDHETKTGRSHSSKRRRT----------AAVHNQS 57
K + ++D + +E+Q DE RS SSK RR + H+ +
Sbjct: 67 KPVAVAVAEDDDSGERWTEDQVPTDEGICVMGRRSESSKERRKITRARRSSRYSQTHSLT 126
Query: 58 ERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
ER+RR +IN+ +K LQ+LVP K+ ++AS LD+ I Y+K L+ VQ M+
Sbjct: 127 ERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQHVQAMS 176
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 22 SASHGRSENQDEDHETKTGRSHSSKRRRTAAV---HNQSERRRRDRINQKMKALQKLVPN 78
SAS + Q ED+ + R R+ H+ +ER RR++I+++MK LQ LVP
Sbjct: 239 SASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDLVPG 298
Query: 79 ASKT-DKASMLDEVIDYLKQLKAQVQMM 105
SK KA MLDE+I+Y++ L+ QV+ +
Sbjct: 299 CSKVIGKAVMLDEIINYVQSLQRQVEFL 326
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I ++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 301 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 360
Query: 104 MM 105
+
Sbjct: 361 FL 362
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 341 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 400
Query: 104 MM 105
+
Sbjct: 401 FL 402
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 104 MM 105
+
Sbjct: 320 FL 321
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 348 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 407
Query: 104 MM 105
+
Sbjct: 408 FL 409
>gi|50725201|dbj|BAD33952.1| bHLH-like protein [Oryza sativa Japonica Group]
Length = 215
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 40/48 (83%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ER+RR+RIN + L+ LVP+AS+ DKA++L EV+ Y+++L+++
Sbjct: 32 HSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
+KR + H+ +ER RR++IN +MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 156 AKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVE 215
Query: 104 MMN 106
++
Sbjct: 216 FLS 218
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 12 SLKTKT-TDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
SL+T+ TD ++S +N K H RR A H+ +ER RR++I+++M
Sbjct: 95 SLRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERM 154
Query: 70 KALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
K LQ LVP +K KAS+LDE+I+Y++ L+ QV+ ++
Sbjct: 155 KILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFLS 192
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I ++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 104 MM 105
+
Sbjct: 363 FL 364
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 104 MM 105
+
Sbjct: 320 FL 321
>gi|356559821|ref|XP_003548195.1| PREDICTED: transcription factor MYC2-like [Glycine max]
Length = 466
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 41/56 (73%)
Query: 48 RRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
R T H ++ER+RR+++N + AL+ +VPN S+ DKAS+L + + Y+ +LKA+++
Sbjct: 283 RETPINHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIE 338
>gi|18026956|gb|AAL55711.1|AF251689_1 putative transcription factor BHLH4 [Arabidopsis thaliana]
Length = 589
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQ 466
>gi|449476926|ref|XP_004154878.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 46 KRRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
KRR+ + + + R+RR++I++K++ LQ+LVP SK D SMLDE YLK L+AQ
Sbjct: 181 KRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQ 240
Query: 102 VQMMNNV 108
++ + +
Sbjct: 241 IKALEGL 247
>gi|10998404|gb|AAG25927.1|AF260918_1 anthocyanin 1 [Petunia x hybrida]
gi|10998406|gb|AAG25928.1|AF260919_1 anthocyanin 1 [Petunia x hybrida]
Length = 668
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ +VQ
Sbjct: 476 HVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKVQ 525
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 45 SKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
S+ +AA QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q+
Sbjct: 264 SRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQI 323
Query: 103 QMM 105
+++
Sbjct: 324 KLL 326
>gi|168029931|ref|XP_001767478.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681374|gb|EDQ67802.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1153
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
Query: 32 DEDHETKTGRS--HSSKRRRTAAV---------HNQSERRRRDRINQKMKALQKLVPNAS 80
D++ E +G++ + SKR AA H +ER+RR+ +N+K + L+ LVPN +
Sbjct: 529 DQEREVLSGKNIVYGSKRELGAASAKGEPRGVNHFATERQRREYLNEKYQTLRSLVPNPT 588
Query: 81 KTDKASMLDEVIDYLKQLKAQVQMM 105
K D+AS++ + I+Y+K+LK VQ +
Sbjct: 589 KADRASIVADAIEYVKELKRTVQEL 613
>gi|125605992|gb|EAZ45028.1| hypothetical protein OsJ_29666 [Oryza sativa Japonica Group]
Length = 215
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 40/48 (83%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
H+++ER+RR+RIN + L+ LVP+AS+ DKA++L EV+ Y+++L+++
Sbjct: 32 HSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>gi|15236692|ref|NP_193522.1| transcription factor MYC4 [Arabidopsis thaliana]
gi|75278047|sp|O49687.1|BH004_ARATH RecName: Full=Transcription factor MYC4; Short=AtMYC4; AltName:
Full=Basic helix-loop-helix protein 4; Short=AtbHLH4;
Short=bHLH 4; AltName: Full=Transcription factor EN 37;
AltName: Full=bHLH transcription factor bHLH004
gi|2894597|emb|CAA17131.1| bHLH protein-like [Arabidopsis thaliana]
gi|7268540|emb|CAB78790.1| bHLH protein-like [Arabidopsis thaliana]
gi|62320362|dbj|BAD94748.1| putative transcription factor BHLH4 [Arabidopsis thaliana]
gi|332658560|gb|AEE83960.1| transcription factor MYC4 [Arabidopsis thaliana]
Length = 589
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 40/50 (80%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
H ++ER+RR+++NQ+ +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQ 466
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 254 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 313
Query: 104 MM 105
+
Sbjct: 314 FL 315
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 8/82 (9%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++++ + M
Sbjct: 280 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS-----DDLWMY 334
Query: 119 MPL---GMQQQLQMSLLARMGM 137
P+ G+ L +S+ G+
Sbjct: 335 APIAYNGINIGLDLSISPTKGI 356
>gi|356528396|ref|XP_003532789.1| PREDICTED: transcription factor GLABRA 3-like [Glycine max]
Length = 630
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
H SERRRR ++N++ L+ +VP+ SK DK S+LD+ IDYLK+L+ +V+ +
Sbjct: 433 HVMSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIDYLKKLERRVKEL 484
>gi|163311844|gb|ABY26935.1| putative anthocyanin transcriptional regulator [Ipomoea violacea]
Length = 684
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
H +ERRRR+++N++ L+ LVP +K DKAS+L + I+Y+KQL+ ++Q + R +
Sbjct: 487 HVLAERRRREKLNKRFIILRSLVPFVTKMDKASILGDTIEYVKQLRRRIQELEAARGS 544
>gi|449458249|ref|XP_004146860.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 271
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 46 KRRRTAAVHNQSE----RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
KRR+ + + + R+RR++I++K++ LQ+LVP SK D SMLDE YLK L+AQ
Sbjct: 181 KRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQ 240
Query: 102 VQMMNNV 108
++ + +
Sbjct: 241 IKALEGL 247
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 352 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 411
Query: 104 MM 105
+
Sbjct: 412 FL 413
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 16/83 (19%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN+++K LQ L+PN +K D ++ML+E + Y+K L+ Q++++++ M M
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDMWMF 302
Query: 119 MPLGMQQQLQMSLLARMGMGVGL 141
P +A G+ VGL
Sbjct: 303 AP-----------IAYNGVNVGL 314
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319
Query: 104 MM 105
+
Sbjct: 320 FL 321
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 16/83 (19%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN+++K LQ L+PN +K D ++ML+E + Y+K L+ Q++++++ M M
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDMWMF 302
Query: 119 MPLGMQQQLQMSLLARMGMGVGL 141
P +A G+ VGL
Sbjct: 303 AP-----------IAYNGVNVGL 314
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 16/83 (19%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
R+RR+RIN+++K LQ L+PN +K D ++ML+E + Y+K L+ Q++++++ M M
Sbjct: 248 RKRRERINERLKILQNLIPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDMWMF 302
Query: 119 MPLGMQQQLQMSLLARMGMGVGL 141
P +A G+ VGL
Sbjct: 303 AP-----------IAYNGVNVGL 314
>gi|297603150|ref|NP_001053530.2| Os04g0557200 [Oryza sativa Japonica Group]
gi|215767146|dbj|BAG99374.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629342|gb|EEE61474.1| hypothetical protein OsJ_15745 [Oryza sativa Japonica Group]
gi|255675674|dbj|BAF15444.2| Os04g0557200 [Oryza sativa Japonica Group]
Length = 559
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 39 TGRSHSSKRRRTAAVHNQ--SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
TGR + + + + N SERRRR+++N+ L+ +VP+ K DKAS+L+E I YLK
Sbjct: 368 TGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLK 427
Query: 97 QLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMS---LLARMGMGVGLGTG 144
L+ +V+ + + ++ P G Q++ +++ L++ +G+ G G
Sbjct: 428 VLEKRVKELES--SSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAG 476
>gi|38345751|emb|CAE03479.2| OSJNBa0065O17.4 [Oryza sativa Japonica Group]
Length = 567
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 39 TGRSHSSKRRRTAAVHNQ--SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
TGR + + + + N SERRRR+++N+ L+ +VP+ K DKAS+L+E I YLK
Sbjct: 376 TGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLK 435
Query: 97 QLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMS---LLARMGMGVGLGTG 144
L+ +V+ + + ++ P G Q++ +++ L++ +G+ G G
Sbjct: 436 VLEKRVKELES--SSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAG 484
>gi|4321762|gb|AAD15818.1| transcription factor MYC7E [Zea mays]
Length = 702
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 41/59 (69%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++ + + +
Sbjct: 525 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTSLETDKETL 583
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 38/47 (80%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 109 RKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 155
>gi|351724673|ref|NP_001235786.1| uncharacterized protein LOC100305722 [Glycine max]
gi|255626423|gb|ACU13556.1| unknown [Glycine max]
Length = 265
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
H Q+E+RRRDRIN ++ L+KL+P + K DKA++L VID +K LK
Sbjct: 79 HRQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLK 124
>gi|224128025|ref|XP_002320222.1| predicted protein [Populus trichocarpa]
gi|222860995|gb|EEE98537.1| predicted protein [Populus trichocarpa]
Length = 430
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 19 DEDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPN 78
D+ + HG Q E ETK + + H ++ER+RR+++N + AL+ +VPN
Sbjct: 221 DDHTIEHGEKRTQ-ERAETKKDNVNKLGQSGAPLNHVEAERQRREKLNHRFYALRAVVPN 279
Query: 79 ASKTDKASMLDEVIDYLKQLKAQVQMM 105
S+ DKAS+L + + Y+ ++KA+V +
Sbjct: 280 VSRMDKASLLSDAVSYINEMKAKVDKL 306
>gi|116310396|emb|CAH67406.1| OSIGBa0137D06.7 [Oryza sativa Indica Group]
Length = 554
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 39 TGRSHSSKRRRTAAVHNQ--SERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLK 96
TGR + + + + N SERRRR+++N+ L+ +VP+ K DKAS+L+E I YLK
Sbjct: 363 TGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLK 422
Query: 97 QLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMS---LLARMGMGVGLGTG 144
L+ +V+ + + ++ P G Q++ +++ L++ +G+ G G
Sbjct: 423 VLEKRVKELES--SSEPSHQRTTETGQQRRCEITGKELVSEIGVSGGGDAG 471
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 31 QDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASML 88
++++ K G H RR A H+ +ER RR++I+ +MK LQ LVP S+ T KA ML
Sbjct: 6 KNKEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVML 65
Query: 89 DEVIDYLKQLKAQVQMMN 106
+E+I+Y+K L+ Q++ ++
Sbjct: 66 EEIINYVKSLQRQIEFLS 83
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+R++++++ LQ+LVP SK D A+MLDE YLK LK+Q++ +
Sbjct: 311 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 357
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+R++++++ LQ+LVP SK D A+MLDE YLK LK+Q++ +
Sbjct: 241 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 287
>gi|449438279|ref|XP_004136916.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
gi|449511253|ref|XP_004163905.1| PREDICTED: transcription factor bHLH25-like [Cucumis sativus]
Length = 340
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRT----AAVHNQSERRRRDRINQKMKALQKL 75
+DS +H + H TK+ R S R + A H +ERRRR++++Q+ AL +
Sbjct: 141 QDSLAH-------QSHTTKSNRGTRSPSRNSRIPQAQDHILAERRRREKLSQRFIALSAI 193
Query: 76 VPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
VP K DKAS+L + I YLKQL+ +V+++
Sbjct: 194 VPGLKKMDKASVLGDAIKYLKQLQEKVKIL 223
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+
Sbjct: 155 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 214
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 215 QVEFLS 220
>gi|414867852|tpg|DAA46409.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 705
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 41/59 (69%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++ + + +
Sbjct: 528 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTSLETDKETL 586
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I ++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362
Query: 104 MM 105
+
Sbjct: 363 FL 364
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
R RR+R++++++ LQ+LVP SK D A+MLDE YLK LK+Q++ +
Sbjct: 313 RLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEAL 359
>gi|328687969|gb|AEB35596.1| MYC2 [Helianthus tuberosus]
Length = 155
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
+RN + + + + Q+ ++MS + G L + ++ + M ++ P
Sbjct: 71 LRNQIDALKKELSNKVSAQENMKMSSITXRGPPADLDVDVKVIGWDAMIRVQCNKKSHP 129
>gi|15222504|ref|NP_176552.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|42571979|ref|NP_974080.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|334183608|ref|NP_001185302.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|34222624|sp|Q9CAD0.1|EGL1_ARATH RecName: Full=Transcription factor EGL1; AltName: Full=Basic
helix-loop-helix protein 2; Short=AtMYC146;
Short=AtbHLH2; Short=bHLH 2; AltName: Full=Protein
ENHANCER OF GLABRA 3; AltName: Full=Transcription factor
EN 30; AltName: Full=bHLH transcription factor bHLH002
gi|12324939|gb|AAG52418.1|AC011622_6 putative transcription factor; 68971-66046 [Arabidopsis thaliana]
gi|18026952|gb|AAL55709.1|AF251687_1 putative transcription factor BHLH2 [Arabidopsis thaliana]
gi|225898046|dbj|BAH30355.1| hypothetical protein [Arabidopsis thaliana]
gi|332196003|gb|AEE34124.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196004|gb|AEE34125.1| transcription factor EGL1 [Arabidopsis thaliana]
gi|332196005|gb|AEE34126.1| transcription factor EGL1 [Arabidopsis thaliana]
Length = 596
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 42/58 (72%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
H SE++RR+++N++ L+ ++P+ SK DK S+LD+ I+YL+ L+ +VQ + + R +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRES 463
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 38/46 (82%)
Query: 59 RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
R+RR+RIN++++ LQ LVPN +K D ++ML+E ++Y+K L+ Q+++
Sbjct: 290 RKRRERINERLRVLQNLVPNGTKVDISTMLEEAVNYVKFLQTQIKV 335
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 43 HSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKA 100
H RR A H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+
Sbjct: 157 HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQ 216
Query: 101 QVQMMN 106
QV+ ++
Sbjct: 217 QVEFLS 222
>gi|12643064|gb|AAK00453.1|AC060755_23 putative MYC transcription factor [Oryza sativa Japonica Group]
Length = 688
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 41/59 (69%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +L+ ++ + + +
Sbjct: 514 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKETL 572
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++MK LQ LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 293 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 352
Query: 104 MM 105
+
Sbjct: 353 FL 354
>gi|328687961|gb|AEB35592.1| MYC2 [Helianthus tuberosus]
Length = 155
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNN------ 107
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ +LKA+++ NN
Sbjct: 13 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAILYINELKAKLE--NNEGNKDE 70
Query: 108 VRNNMPQMNMMM--PLGMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAP 164
+RN + + + + Q+ ++MS + G L + ++ + M ++ P
Sbjct: 71 LRNQIDALKKELSNKVSAQENMKMSSITXRGPPADLDVDVKVIGWDAMIRVQCNKKSHP 129
>gi|51572284|gb|AAU06823.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 312
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 54 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMP 113
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+ L+ +++ M R +
Sbjct: 172 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQKKLKEMEVERERLI 231
Query: 114 QMNMMMP 120
+ M+ P
Sbjct: 232 ESGMIDP 238
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 42 SHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
++ S+ R +A QS R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+
Sbjct: 181 ANKSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQ 240
Query: 100 AQVQMM 105
Q++++
Sbjct: 241 LQIKLL 246
>gi|384248993|gb|EIE22476.1| hypothetical protein COCSUDRAFT_47901 [Coccomyxa subellipsoidea
C-169]
Length = 295
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 55/83 (66%), Gaps = 11/83 (13%)
Query: 20 EDSASHGRSENQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNA 79
E +AS GR+++ D +K+ +++S+ H +E+RRR RIN+++ L+++VP+A
Sbjct: 92 EPAASRGRTKSND----SKSSSAYASR-------HQAAEQRRRTRINERLDRLRQVVPHA 140
Query: 80 SKTDKASMLDEVIDYLKQLKAQV 102
+ + AS L+EVI Y++ L+ ++
Sbjct: 141 ERANTASFLEEVITYIQGLQKRI 163
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+Q+MK LQ LVP +K KA MLDE+I+Y++ L+ QV+
Sbjct: 159 ARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVE 218
Query: 104 MMN 106
++
Sbjct: 219 FLS 221
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Query: 11 KSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKM 69
K ++ K+T ED E G H RR A H+ +ER RR+RI+++M
Sbjct: 104 KEVEEKSTTED--------------EPPKGYIHVRARRGQATDSHSLAERVRRERISERM 149
Query: 70 KALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMMN 106
+ LQ LVP K T KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 150 RMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLS 187
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 45 SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
++R + H+ +ER RR++I+++M+ LQ+LVP +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 165 ARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 224
Query: 104 MM 105
+
Sbjct: 225 FL 226
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.122 0.336
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,116,244,213
Number of Sequences: 23463169
Number of extensions: 115538693
Number of successful extensions: 771535
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2897
Number of HSP's successfully gapped in prelim test: 3552
Number of HSP's that attempted gapping in prelim test: 765164
Number of HSP's gapped (non-prelim): 7538
length of query: 230
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 92
effective length of database: 9,121,278,045
effective search space: 839157580140
effective search space used: 839157580140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)