BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026943
         (230 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
           SV=1
          Length = 399

 Score =  131 bits (329), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 135/216 (62%), Gaps = 22/216 (10%)

Query: 9   SLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSH-SSKRRRTAAVHNQSERRRRDRINQ 67
           S+ S      D DS  H R + +DE+ +   G+S  S+KR R AA+HNQSER+RRD+INQ
Sbjct: 172 SMGSHDNTIDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQ 231

Query: 68  KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQL 127
           +MK LQKLVPN+SKTDKASMLDEVI+YLKQL+AQV MM+  R NMP M + M +  QQQL
Sbjct: 232 RMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS--RMNMPSMMLPMAMQQQQQL 289

Query: 128 QMSLLAR--MGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLPP----PIYSPAASVT-- 179
           QMSL++            G+G+LD+N+M  AAA+A     ++ P    P+  P+   +  
Sbjct: 290 QMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSN 349

Query: 180 --------LPDPYYAFLA---QSMNVELYNKMAALF 204
                   +PDP  AFLA   Q   +E Y++MA L+
Sbjct: 350 DSRFQSPLIPDPMSAFLACSTQPTTMEAYSRMATLY 385


>sp|Q570R7|PIF7_ARATH Transcription factor PIF7 OS=Arabidopsis thaliana GN=BHLH72 PE=1
           SV=2
          Length = 366

 Score =  110 bits (274), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 10/125 (8%)

Query: 2   MTWASYESLKSLKT-KTTDEDSASHGRSENQD---EDHETK--TGRSHSSKRRRTAAVHN 55
           M+WAS+ES +SLKT +T D D    G SE QD   ++ ET+   GRS+  +R R AA+HN
Sbjct: 115 MSWASFESGRSLKTARTGDRDYFRSG-SETQDTEGDEQETRGEAGRSNG-RRGRAAAIHN 172

Query: 56  QSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
           +SERRRRDRINQ+M+ LQKL+P ASK DK S+LD+VI++LKQL+AQVQ M ++R N+PQ 
Sbjct: 173 ESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM-SLRANLPQQ 231

Query: 116 NMMMP 120
            MM+P
Sbjct: 232 -MMIP 235


>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
          Length = 524

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)

Query: 31  QDEDHETKTGRSHS--------SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT 82
           +D + E+  GR  +        SKR R+A VHN SERRRRDRIN+KM+ALQ+L+PN +K 
Sbjct: 317 EDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV 376

Query: 83  DKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGM 123
           DKASMLDE I+YLK L+ QVQ+M+          +M P GM
Sbjct: 377 DKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGM 417


>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
          Length = 478

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 11/98 (11%)

Query: 11  KSLKTKTTDEDSASHGRSENQDEDHETKTGR--SHSSKRRRTAAVHNQSERRRRDRINQK 68
           K  +  TTDE   +  RSE      ETK  R  + S+KR R A VHN SER+RRDRIN++
Sbjct: 253 KEREATTTDE---TESRSE------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINER 303

Query: 69  MKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMN 106
           MKALQ+L+P  +K+DKASMLDE I+Y+K L+ Q+QMM+
Sbjct: 304 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMS 341


>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
           SV=1
          Length = 373

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)

Query: 49  RTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNV 108
           R A VHN SE+RRR RIN+KMKALQ L+PN++KTDKASMLDE I+YLKQL+ QVQM+  +
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML-TM 255

Query: 109 RNNMPQMNMMMPLGMQQQLQMS 130
           RN +    + +P      LQ+S
Sbjct: 256 RNGINLHPLCLPGTTLHPLQLS 277


>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
          Length = 416

 Score = 94.7 bits (234), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 29/167 (17%)

Query: 9   SLKSLKTKTTD--EDSASHGRSENQDEDHETKT-----GRSHSSKRRRTAAVHNQSERRR 61
           S  SLK K  D  E+ +++  + + DE  + KT      R   +KR+R+  VH   ER+R
Sbjct: 182 SCCSLKRKYGDIEEEESTYLSNNSDDESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKR 241

Query: 62  RDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL 121
           RD  N+KM+ALQ L+PN  K DKAS+LDE I Y++ L+ QVQMM ++ N + +   M+P+
Sbjct: 242 RDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM-SMGNGLIRPPTMLPM 300

Query: 122 GMQQQLQMSLLARMGMGVGLGTGMGMLDMNTMAAAAATARTAPQSLP 168
           G          + MG+G+ +G             AAAT  + PQ LP
Sbjct: 301 GH--------YSPMGLGMHMG-------------AAATPTSIPQFLP 326


>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
          Length = 210

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 5/89 (5%)

Query: 22  SASHGRSENQDEDHETKTGRS-----HSSKRRRTAAVHNQSERRRRDRINQKMKALQKLV 76
           S  +G SE   + +  +  RS     +S KR   A  HN SE++RR +IN+KMKALQKL+
Sbjct: 61  SVGYGVSETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLI 120

Query: 77  PNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           PN++KTDKASMLDE I+YLKQL+ QVQ +
Sbjct: 121 PNSNKTDKASMLDEAIEYLKQLQLQVQTL 149


>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
           SV=1
          Length = 413

 Score = 88.2 bits (217), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 6/125 (4%)

Query: 14  KTKTTDEDSASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKAL 72
           +T  TDE      R E   E+  T+  R S SSKR R A +H  SERRRR +IN+ MKAL
Sbjct: 242 ETDITDE-RKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL 300

Query: 73  QKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPLGMQQQLQMSLL 132
           Q+L+P  +KTD++SMLD+VI+Y+K L++Q+QM +     +P    MM  G  QQ  M  +
Sbjct: 301 QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPP---MMYAGNIQQQYMPHM 357

Query: 133 ARMGM 137
           A MGM
Sbjct: 358 A-MGM 361


>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
           GN=BHLH56 PE=4 SV=2
          Length = 445

 Score = 87.0 bits (214), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 8/105 (7%)

Query: 23  ASHGRSENQDEDHETKTGR-SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK 81
           A+  + + ++E H T+  R S S KR RTA +HN +ERRRR++IN+KMK LQ+L+P  +K
Sbjct: 228 ATESKLKAREETHGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNK 287

Query: 82  TDKASMLDEVIDYLKQLKAQVQ-----MMN--NVRNNMPQMNMMM 119
           + K S LD+ I+Y+K L++Q+Q     MMN  N +  MP M M M
Sbjct: 288 STKVSTLDDAIEYVKSLQSQIQGMMSPMMNAGNTQQFMPHMAMDM 332


>sp|Q8L5W7|PIF6_ARATH Transcription factor PIF6 OS=Arabidopsis thaliana GN=PIF6 PE=1 SV=1
          Length = 363

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 27/149 (18%)

Query: 46  KRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           KR+R A  +N  ER +R+ IN+KM+ LQ L+PN+ K D  SMLDE I+Y+  L+ QVQMM
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMM 244

Query: 106 NNVRNNMPQMNMMMPLGMQQQLQMSLLARMGMGVG---------LGTGM----------- 145
             + N     +MMMPLG     QM L   +GM +G         LG G+           
Sbjct: 245 -TMGNRFVTPSMMMPLGPNYS-QMGLAMGVGMQMGEQQFLPAHVLGAGLPGINDSADMLR 302

Query: 146 -----GMLDMNTMAAAAATARTAPQSLPP 169
                G++ M   A    T   +PQS+PP
Sbjct: 303 FLNHPGLMPMQNSAPFIPTENCSPQSVPP 331


>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
          Length = 430

 Score = 80.9 bits (198), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/65 (69%), Positives = 56/65 (86%)

Query: 41  RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
           RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ SKTDKAS+LDE IDYLK L+ 
Sbjct: 249 RSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQL 308

Query: 101 QVQMM 105
           Q+Q+M
Sbjct: 309 QLQVM 313


>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
          Length = 444

 Score = 80.5 bits (197), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 56/65 (86%)

Query: 41  RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
           RS S++R R A VHN SERRRRDRIN++MKALQ+L+P+ S+TDKAS+LDE IDYLK L+ 
Sbjct: 248 RSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQM 307

Query: 101 QVQMM 105
           Q+Q+M
Sbjct: 308 QLQVM 312


>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
           SV=1
          Length = 350

 Score = 77.8 bits (190), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 52/65 (80%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
           ++R +    H+ +ER RR+RI ++MKALQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 140 ARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 199

Query: 105 MNNVR 109
           ++  R
Sbjct: 200 LSMSR 204


>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
           SV=2
          Length = 310

 Score = 76.3 bits (186), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 52/65 (80%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
           ++R +    H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+IDY+K L+ QV++
Sbjct: 132 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKV 191

Query: 105 MNNVR 109
           ++  R
Sbjct: 192 LSMSR 196


>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
           PE=2 SV=1
          Length = 307

 Score = 75.5 bits (184), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 6/78 (7%)

Query: 42  SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
           S S KR R A +HN +ERRRR++IN++MK LQ+L+P  +K+ K SML++VI+Y+K L+ Q
Sbjct: 143 STSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQ 202

Query: 102 VQMMNNVRNNMPQMNMMM 119
           +         MP M M M
Sbjct: 203 INQF------MPHMAMGM 214


>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
           SV=1
          Length = 297

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 52/65 (80%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQM 104
           ++R +    H+ +ER RR+RI ++MK+LQ+LVPN +KTDKASMLDE+I+Y++ L+ QV++
Sbjct: 101 ARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKV 160

Query: 105 MNNVR 109
           ++  R
Sbjct: 161 LSMSR 165


>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
           SV=1
          Length = 373

 Score = 67.4 bits (163), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 44/59 (74%)

Query: 59  RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNM 117
           R+RR+RI++K++ LQ LVP  +K D ASMLDE  +YLK L+AQV+ + N+R  + Q N+
Sbjct: 285 RQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTNL 343


>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
          Length = 292

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 57  SERRRRD-RINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQM 115
           S+RRRRD +++ KM+ LQ+LVPN  KTDK S+LD+ I+Y+K L+ Q+QMM+ V  N   +
Sbjct: 141 SKRRRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTVGVNPYFL 200

Query: 116 NMMMPLGMQQQLQMSLLARMGM 137
              +  GM   +  ++ +  G+
Sbjct: 201 PATLGFGMHNHMLTAMASAHGL 222


>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
           thaliana GN=AIB PE=2 SV=2
          Length = 566

 Score = 65.1 bits (157), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 32  DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
           DE    K GR  ++ R      H ++ER+RR+++NQ+  AL+ +VPN SK DKAS+L + 
Sbjct: 375 DEKRPRKRGRKPANGREEPLN-HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 433

Query: 92  IDYLKQLKAQVQMMNNVR 109
           I Y+K+L+ +V++M + R
Sbjct: 434 ISYIKELQEKVKIMEDER 451


>sp|Q8GT73|BH119_ARATH Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119
           PE=2 SV=2
          Length = 544

 Score = 62.8 bits (151), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 13/91 (14%)

Query: 42  SHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQ 101
           S S KR R A +HN SERRRR+RIN++MK LQ+L+P   KTDK SML++VI+Y+K L+ Q
Sbjct: 350 STSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQ 409

Query: 102 VQMMN-------------NVRNNMPQMNMMM 119
           +QMM+             N +  MP M M M
Sbjct: 410 IQMMSMGHGMMPPMMHEGNTQQFMPHMAMGM 440


>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2
           SV=3
          Length = 337

 Score = 62.0 bits (149), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 8/85 (9%)

Query: 24  SHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK- 81
           S G SENQ  D+       H   RR  A   H+ +ER RR++I++KMK LQ +VP  +K 
Sbjct: 171 SKGASENQKLDY------IHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKV 224

Query: 82  TDKASMLDEVIDYLKQLKAQVQMMN 106
           T KA MLDE+I+Y++ L+ QV+ ++
Sbjct: 225 TGKAGMLDEIINYVQCLQRQVEFLS 249


>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
           SV=1
          Length = 328

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 61/100 (61%), Gaps = 5/100 (5%)

Query: 10  LKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRR--RTAAVHNQS--ERRRRDRI 65
           LK  KT  +D D ++ G +    ED E     + + K R  R AA   QS   R+RR+RI
Sbjct: 201 LKPQKTCCSD-DESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERI 259

Query: 66  NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           N++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 260 NERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 299


>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2
           SV=1
          Length = 486

 Score = 61.2 bits (147), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)

Query: 23  ASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK 81
           ++ G+ + +      K G  H   RR  A   H+ +ER RR++I+++MK LQ LVP  +K
Sbjct: 282 SNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNK 341

Query: 82  -TDKASMLDEVIDYLKQLKAQVQMM 105
            T KA MLDE+I+Y++ L+ QV+ +
Sbjct: 342 VTGKAVMLDEIINYVQSLQRQVEFL 366


>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
           SV=1
          Length = 590

 Score = 61.2 bits (147), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 7/105 (6%)

Query: 15  TKTTDEDSASHGRSENQDEDHETKTGRSHSSKR-------RRTAAVHNQSERRRRDRINQ 67
           ++ ++ +S   G  E  D     ++G +   KR       R  A  H ++ER+RR+++NQ
Sbjct: 388 SRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQ 447

Query: 68  KMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNM 112
           +  AL+ +VPN SK DKAS+L + + Y+ +L A++++M   R  +
Sbjct: 448 RFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492


>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
           SV=1
          Length = 258

 Score = 60.8 bits (146), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 14/133 (10%)

Query: 12  SLKTKTTDEDSAS--HGRSENQDEDHETKTGRSHSSKRRRT--AAVHNQS--ERRRRDRI 65
           S ++ T DE + +   G+S +   D E  +  S   K R T   A   QS   R+RR++I
Sbjct: 130 SSESNTVDESNTNWVDGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKI 189

Query: 66  NQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMMMPL---G 122
           N+++K LQ LVPN +K D ++ML+E + Y+K L+ Q++++++       + M  PL   G
Sbjct: 190 NERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS-----DDLWMYAPLAYNG 244

Query: 123 MQQQLQMSLLARM 135
           +      +LL+R+
Sbjct: 245 LDMGFHHNLLSRL 257


>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2
           SV=1
          Length = 390

 Score = 60.5 bits (145), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 3/100 (3%)

Query: 8   ESLKSLKTKTTDEDSASHGRSENQDEDHETKTGRSHSSKRRRTAA-VHNQSERRRRDRIN 66
           E  K  K + +   +A+   SE Q  D   K G  H   RR  A   H+ +ER RR++I+
Sbjct: 188 EEDKKQKDEQSPTSNANKTNSEKQPSD-SLKDGYIHMRARRGQATNSHSLAERVRREKIS 246

Query: 67  QKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQMM 105
           ++MK LQ LVP   K T KA MLDE+I+Y++ L+ Q++ +
Sbjct: 247 ERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFL 286


>sp|Q66GR3|BH130_ARATH Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130
           PE=1 SV=1
          Length = 359

 Score = 60.1 bits (144), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)

Query: 48  RRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
           +R  A H +S  ER RR RI+++M+ LQ+LVPN  K T+ + MLD  +DY+K L+ Q ++
Sbjct: 282 KRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKI 341

Query: 105 MNNVRNNMPQMN 116
           +N+ R N   MN
Sbjct: 342 LNDNRANCKCMN 353


>sp|Q8GY61|BH063_ARATH Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2
           SV=1
          Length = 335

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 38  KTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYL 95
           KT   H   RR  A   H+ +ER RR++I+++MK LQ LVP   K T KA MLDE+I+Y+
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYV 225

Query: 96  KQLKAQVQMM 105
           + L+ Q++ +
Sbjct: 226 QSLQRQIEFL 235


>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
           PE=4 SV=1
          Length = 223

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 59  RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNNMPQMNMM 118
           R+RR+RIN ++K LQ LVPN +K D ++ML++ + Y+K L+ Q++++++       + M 
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS-----EDLWMY 202

Query: 119 MPL---GMQQQLQMSLLARM 135
            PL   G+   L  +LL+R+
Sbjct: 203 APLAHNGLNMGLHHNLLSRL 222


>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
           PE=4 SV=1
          Length = 912

 Score = 58.9 bits (141), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 35  HETKTGRSHSSKRRRTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVI 92
           H+++TG +  S+   T +   QS   R RR RI+ + K LQ +VP  +K D  SMLDE I
Sbjct: 27  HKSETGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAI 86

Query: 93  DYLKQLKAQVQMMNN 107
            Y+K LKAQ+    N
Sbjct: 87  SYVKFLKAQIWYHQN 101


>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
          Length = 623

 Score = 58.9 bits (141), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 39/49 (79%)

Query: 54  HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQV 102
           H ++ER+RR+++NQ+  AL+ +VPN SK DKAS+L + I Y+ +LK++V
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKV 501


>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
           SV=1
          Length = 352

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 2/59 (3%)

Query: 49  RTAAVHNQS--ERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           R AA   QS   R+RR+RIN++++ LQ LVPN +K D ++ML+E + Y+K L+ Q++++
Sbjct: 270 RGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLL 328


>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2
           SV=1
          Length = 304

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 3/62 (4%)

Query: 48  RRTAAV--HNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQM 104
           RR  A   H+ +ER RR++I++KMK LQ +VP  +K T KA MLDE+I+Y++ L+ QV+ 
Sbjct: 144 RRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEF 203

Query: 105 MN 106
           ++
Sbjct: 204 LS 205


>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
          Length = 592

 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 40/50 (80%)

Query: 54  HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
           H ++ER+RR+++NQ+  +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQ 465


>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
           SV=1
          Length = 254

 Score = 58.2 bits (139), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 54  HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLK 99
           H  +E+RRRDRIN  + AL+KLVPN+ K DKA++L  VI+ +K+LK
Sbjct: 67  HRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELK 112


>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137
           PE=2 SV=1
          Length = 286

 Score = 58.2 bits (139), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 36  ETKTGRSHSSKRRRTAA-VHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVID 93
           E  T   H   RR  A   H+ +ER RR++I+++M+ LQ LVP   K T KA MLDE+I+
Sbjct: 128 EPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIIN 187

Query: 94  YLKQLKAQVQMM 105
           Y++ L+ QV+ +
Sbjct: 188 YVQTLQTQVEFL 199


>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2
           SV=1
          Length = 366

 Score = 58.2 bits (139), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
           ++R +    H+ +ER RR++I+++M+ LQ+LVP  +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 208 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 267

Query: 104 MM 105
            +
Sbjct: 268 FL 269


>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
           SV=1
          Length = 498

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
           ++R +    H+ +ER RR++I ++MK LQ LVP  +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 303 ARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 362

Query: 104 MM 105
            +
Sbjct: 363 FL 364


>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
           SV=1
          Length = 589

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 40/50 (80%)

Query: 54  HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
           H ++ER+RR+++NQ+  +L+ +VPN SK DKAS+L + I Y+ +LK+++Q
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQ 466


>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2
           SV=1
          Length = 456

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 1/62 (1%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
           ++R +    H+ +ER RR++I+++MK LQ LVP  +K T KA MLDE+I+Y++ L+ QV+
Sbjct: 260 ARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVE 319

Query: 104 MM 105
            +
Sbjct: 320 FL 321


>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
           SV=1
          Length = 596

 Score = 57.8 bits (138), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 42/58 (72%)

Query: 54  HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMMNNVRNN 111
           H  SE++RR+++N++   L+ ++P+ SK DK S+LD+ I+YL+ L+ +VQ + + R +
Sbjct: 406 HALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRES 463


>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
          Length = 198

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 37/47 (78%)

Query: 59  RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           RRRR+RI++K++ L+++VP  +K D ASMLDE I Y K LK QV+++
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174


>sp|A4D998|BH075_ARATH Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2
           SV=1
          Length = 223

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 30  NQDEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASML 88
           N DE  + K      +KR +    H+ +ER RR++IN+++K LQ LVP   K    A ML
Sbjct: 91  NGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150

Query: 89  DEVIDYLKQLKAQVQMM 105
           D +IDY++ L+ Q++ +
Sbjct: 151 DVIIDYVRSLQNQIEFL 167


>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
           SV=1
          Length = 637

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 45/66 (68%)

Query: 44  SSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQ 103
           S + R     H   E++RR+++N++   L+K++P+ +K DK S+LD+ I+YL++L+ +VQ
Sbjct: 432 SPEARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQ 491

Query: 104 MMNNVR 109
            + + R
Sbjct: 492 ELESCR 497


>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
           SV=1
          Length = 467

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 3/97 (3%)

Query: 32  DEDHETKTGRSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEV 91
           DE    K GR  ++ R   A  H ++ER+RR+++NQ+  AL+ +VPN SK DKAS+L + 
Sbjct: 300 DEQKPRKRGRKPANGREE-ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADA 358

Query: 92  IDYLKQLKAQVQMMNNVRNNMP--QMNMMMPLGMQQQ 126
           I Y+  ++ ++++    +  M   + N + P  +  Q
Sbjct: 359 ITYITDMQKKIRVYETEKQIMKRRESNQITPAEVDYQ 395


>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1
          Length = 343

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 21  DSASHGRSENQDEDHETKTGRS---------HSSKRRRTAA-VHNQSERRRRDRINQKMK 70
           D    G++E +    ET+  +          H   RR  A   H+ +ER RR++I+++MK
Sbjct: 104 DEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMK 163

Query: 71  ALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQMMN 106
            LQ LVP  +K   KA +LDE+I+Y++ L+ QV+ ++
Sbjct: 164 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200


>sp|Q8GWK7|BEE3_ARATH Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2
           SV=1
          Length = 261

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKT-DKASMLDEVIDYLKQLKAQVQ 103
           ++R +    H+ +ER RR +IN+++K LQ +VP   KT   A+MLDE+I+Y++ L+ QV+
Sbjct: 149 ARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVE 208

Query: 104 MM 105
            +
Sbjct: 209 FL 210


>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2
           SV=1
          Length = 371

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 45  SKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIDYLKQLKAQVQ 103
           ++R +    H+ +ER RR++I+++M  LQ LVP  ++ T KA MLDE+I+Y++ L+ QV+
Sbjct: 193 ARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVE 252

Query: 104 MM 105
            +
Sbjct: 253 FL 254


>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
           GN=BHLH86 PE=4 SV=2
          Length = 307

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 37/47 (78%)

Query: 59  RRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKAQVQMM 105
           + RR+RI++++K LQ+LVPN +K D  +ML++ I Y+K L+ QV+++
Sbjct: 217 KNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVL 263


>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
           PE=2 SV=1
          Length = 256

 Score = 54.7 bits (130), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%)

Query: 41  RSHSSKRRRTAAVHNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIDYLKQLKA 100
           +S +  +   A  H+ +ERRRR RIN +   L+ ++PN  K DKAS+L E + Y  +LK 
Sbjct: 83  KSKTESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKK 142

Query: 101 QVQ 103
            VQ
Sbjct: 143 MVQ 145


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.122    0.336 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,231,141
Number of Sequences: 539616
Number of extensions: 2703765
Number of successful extensions: 18490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 17997
Number of HSP's gapped (non-prelim): 689
length of query: 230
length of database: 191,569,459
effective HSP length: 114
effective length of query: 116
effective length of database: 130,053,235
effective search space: 15086175260
effective search space used: 15086175260
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)