Query 026944
Match_columns 230
No_of_seqs 131 out of 1213
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 03:43:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iyb_A Ribonuclease, ribonucle 100.0 1.2E-66 3.9E-71 435.9 20.7 206 24-230 3-208 (208)
2 1vcz_A RNAse NGR3; hydrolase, 100.0 4.1E-65 1.4E-69 429.0 19.2 205 24-230 3-208 (217)
3 1sgl_A Trichomaglin; S-like ri 100.0 2.2E-60 7.6E-65 398.0 17.6 193 26-230 2-207 (209)
4 1jy5_A CALSEPRRP; RNAse, alpha 100.0 2.4E-60 8.3E-65 398.6 16.7 196 26-230 2-207 (212)
5 1ucd_A Ribonuclease MC; alpha 100.0 4.6E-60 1.6E-64 390.7 15.0 188 29-227 1-190 (190)
6 1ioo_A SF11-RNAse; SELF-incomp 100.0 8.8E-60 3E-64 390.8 15.3 191 28-229 1-196 (196)
7 1iqq_A S3-RNAse; japanese PEAR 100.0 1.1E-58 3.6E-63 385.5 16.0 192 29-227 1-200 (200)
8 3t0o_A Ribonuclease T2, ribonu 100.0 7.5E-57 2.6E-61 381.4 17.3 183 24-215 5-192 (238)
9 1bol_A Protein (ribonuclease R 100.0 4.6E-53 1.6E-57 356.6 13.0 181 26-229 21-221 (222)
10 2pqx_A Ribonuclease I; hydrola 100.0 7.2E-51 2.5E-55 348.0 6.9 191 24-230 6-243 (245)
11 3d3z_A Actibind; RNAse, hydrol 100.0 4.7E-49 1.6E-53 336.8 13.3 188 25-230 23-235 (247)
12 4dvk_A E(RNS) glycoprotein; T2 99.9 2.8E-25 9.6E-30 175.2 -1.5 74 58-142 24-97 (165)
13 2ciw_A Chloroperoxidase; oxido 83.9 0.48 1.6E-05 40.7 2.3 34 148-181 32-66 (299)
14 3ktp_B Trinucleotide repeat-co 35.3 9.3 0.00032 19.6 0.3 9 36-44 4-12 (22)
15 1dqi_A SOR, superoxide reducta 31.4 7.7 0.00026 28.8 -0.6 8 61-68 111-118 (124)
16 1y07_A Desulfoferrodoxin (RBO) 29.6 8.7 0.0003 28.6 -0.6 7 62-68 120-126 (128)
17 1vzi_A Desulfoferrodoxin; ferr 29.5 8.7 0.0003 28.5 -0.6 9 60-68 115-123 (126)
18 4asn_A TUBR; transcription, tu 22.5 46 0.0016 22.8 2.0 42 133-174 2-45 (101)
No 1
>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A
Probab=100.00 E-value=1.2e-66 Score=435.87 Aligned_cols=206 Identities=74% Similarity=1.383 Sum_probs=187.3
Q ss_pred ccCCCccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCC
Q 026944 24 CAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPT 103 (230)
Q Consensus 24 ~~~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~ 103 (230)
.++++||||+|||+|||+||..++.||.|..+.+..+||||||||++.++.+|++|+.+.+|+..+|++++++|+.+||+
T Consensus 3 ~~~~~fD~~~l~l~Wpp~~C~~~~~cc~p~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~i~~l~~~L~~~Wp~ 82 (208)
T 1iyb_A 3 EFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLISRMQQNWPT 82 (208)
T ss_dssp CCCCSCSEEEEEEECHHHHSSSSSCCCCCTTCSCCSSCEEEEEEEECTTSCCCBSCCTTSCCCGGGGGGGHHHHHHHSCC
T ss_pred ccCCCceEEEEEEeCChHHhcCCCCCCCCCCCCCCCCCEEccccCCCCCCCCCCCCCCCCCCCchhcchhhhHhhccCCC
Confidence 45789999999999999999988778987554567899999999998888999999876779988898999999999999
Q ss_pred CccCCCCCcccccccccceeecccCcCChHHHHHHHHHHHhhcCHHHHHHHCCCCCCCCcccHHHHHHHHHHHhCCCceE
Q 026944 104 LACPSGNGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQINLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWI 183 (230)
Q Consensus 104 ~~~~~~~~~~fw~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~~~~g~~p~l 183 (230)
+.++.+++..||+|||+|||||++.+.+|.+||++|++|++++|++++|+++||+|++++|++++|++||++++|..|.|
T Consensus 83 l~~~~~~~~~fW~hEw~KHGTC~~~~~~q~~YF~~a~~l~~~~~~~~~L~~~gI~P~~~~~t~~~I~~Ai~~~~g~~p~l 162 (208)
T 1iyb_A 83 LACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGI 162 (208)
T ss_dssp CCSSCCCSHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHHCCHHHHHHHTTCCSSSCEEEHHHHHHHHHHHHSSCCEE
T ss_pred cccCCCCcchHHHhhccCCeeeCccccCHHHHHHHHHHHHHHcChHHHHHHCCcccCCceEeHHHHHHHHHHHhCCCeEE
Confidence 97666677899999999999999966699999999999999999999999999999778999999999999999999999
Q ss_pred EeeeCCCCCceEEEEEEEEeCCCCceecCCCCCCCCCCCCCeecCCC
Q 026944 184 ECNVDESGNSQLYQIYLCVDTSASNFINCPVFPNGKKCGSQIEFPPF 230 (230)
Q Consensus 184 ~C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C~~~i~~p~f 230 (230)
+|.++.+++.+|.||+||||+++.++|+||....++ |++.|.||+|
T Consensus 163 ~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~-C~~~i~~p~f 208 (208)
T 1iyb_A 163 ECNVDESGNSQLYQIYICVDGSGSNLIECPIFPRGK-CGSSIEFPTF 208 (208)
T ss_dssp EEEECTTCCEEEEEEEEEEETTSSSBCCCSCCCCCC-CCSEEECCCC
T ss_pred EEeeCCCCCeEEEEEEEEecCCCCeeecCCCCCCCC-CCCCcCcCCC
Confidence 999877777899999999999988999999764455 9999999998
No 2
>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A*
Probab=100.00 E-value=4.1e-65 Score=429.01 Aligned_cols=205 Identities=63% Similarity=1.305 Sum_probs=184.8
Q ss_pred ccCCCccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCC
Q 026944 24 CAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPT 103 (230)
Q Consensus 24 ~~~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~ 103 (230)
.+++.||||+|||+|||+||..++.||.|..+.+..+||||||||++.++.+|++|+.+..|+..++.+++++|+.+||+
T Consensus 3 ~~~~~fDy~~l~l~Wpp~~C~~~~~cc~p~~~~p~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~~l~~~L~~~Wp~ 82 (217)
T 1vcz_A 3 EFAQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSLDESEISDLISTMEKNWPS 82 (217)
T ss_dssp --CCSCSEEEEEEECHHHHSSSSSCCCCCTTCSCCSSCEEEEEEEECTTSCCCCCCCTTCCCCGGGGGGGHHHHHHHSCC
T ss_pred ccCCCccEEEEEEeCChhhcCCCCCCCCCCCCCCCCCcEEEcccCCCCCCCCCCCCCCccCCChhhhhhhhhhhhccCcc
Confidence 45789999999999999999987778977554567899999999998888999999876789988999999999999999
Q ss_pred CccCCCCCcccccccccceeecccCcCChHHHHHHHHHHHhhcCHHHHHHHCCCCC-CCCcccHHHHHHHHHHHhCCCce
Q 026944 104 LACPSGNGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQINLLQALRTAGIVP-DGSSYSLESIKDAIKEASGFSPW 182 (230)
Q Consensus 104 ~~~~~~~~~~fw~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~ni~~~L~~~gI~P-~~~~~~~~~i~~ai~~~~g~~p~ 182 (230)
+.++.+++..||+|||+|||||++ .+|.+||++|++|++++|++++|+++||+| .+++|++++|++||++++|..|.
T Consensus 83 l~~~~~~~~~fW~hEw~KHGTC~~--~~~~~YF~~a~~l~~~~n~~~~L~~~gI~Ps~g~~~t~~~I~~Ai~~~~g~~p~ 160 (217)
T 1vcz_A 83 LACPSSDGVRFWSHEWLKHGTCSA--LGERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPY 160 (217)
T ss_dssp CSSSCCCSHHHHHHHHHHTGGGTT--SCHHHHHHHHHHHHHHHCHHHHHHHTTCCCEEEEEEEHHHHHHHHHHHHSSCCE
T ss_pred cccCCCCcchHHhhhccCCeecCC--CCHHHHHHHHHHHHHHcccHHHHHHCCCccCcCccccHHHHHHHHHHHHCCCeE
Confidence 965555678899999999999999 699999999999999999999999999999 68899999999999999999999
Q ss_pred EEeeeCCCCCceEEEEEEEEeCCCCceecCCCCCCCCCCCCCeecCCC
Q 026944 183 IECNVDESGNSQLYQIYLCVDTSASNFINCPVFPNGKKCGSQIEFPPF 230 (230)
Q Consensus 183 l~C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C~~~i~~p~f 230 (230)
|+|.++.+++.+|.||+||||+++.++|+||....++.|++.|.||+|
T Consensus 161 l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~~C~~~i~~p~~ 208 (217)
T 1vcz_A 161 IECNVDTQGNHQIYQVYLCVDKTATDFIDCPIFPHGRGCGSKIEFPPF 208 (217)
T ss_dssp EEEEECTTSCEEEEEEEEEEETTSSSEECCSSCCCCCCCCSEEEECCC
T ss_pred EEEeecCCCCeEEEEEEEEecCCCCeeeeCCCCCCCCCCCCCeEEcCC
Confidence 999987777789999999999998899999976554349999999986
No 3
>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1
Probab=100.00 E-value=2.2e-60 Score=398.05 Aligned_cols=193 Identities=33% Similarity=0.745 Sum_probs=168.8
Q ss_pred CCCccEEEEEeecccccccCC------CCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhc
Q 026944 26 ARNFDFFYFVLQWPGSYCDTA------KSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLK 99 (230)
Q Consensus 26 ~~~fD~~~L~l~Wpp~~C~~~------~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~ 99 (230)
++.||||+|||+|||+||... +.+|... ...+||||||||++.++.+|++|+ +..||..++.+++++|+.
T Consensus 2 ~~~fD~~~l~l~Wpp~~C~~~~~~~~~~~~C~~~---~~~~ftIHGLWP~~~~g~~p~~C~-~~~~~~~~~~~l~~~L~~ 77 (209)
T 1sgl_A 2 EREFDYFILALQWAGTSCRSGGACCPYNGCCKAD---SPTQFTIHGLRPEYSGGERPSCCT-GGSFDPDEIMPFFGKLVE 77 (209)
T ss_dssp --CCSEEEEEEEEHHHHTSSCCCCCTTBTTCSSS---CCCCEEEEEEEECCCSSCCCCCCS-CCCCCGGGGGGGHHHHHH
T ss_pred CCCceEEEEEEECCHHHhcCCccCCCCCCCCCCC---CCCCcEEccccCCCCCCCCCCCCC-CCcCCchhhhhHHHHHHc
Confidence 478999999999999999875 3577642 247999999999988889999998 467998888899999999
Q ss_pred cCCCCccC-----CCCCcccccccccceeecccCcC-ChHHHHHHHHHHHhhcCHHHHHHHCCCCC-CCCcccHHHHHHH
Q 026944 100 NWPTLACP-----SGNGITFWSHEWEKHGTCSESVL-NQHQYFQTALNLKNQINLLQALRTAGIVP-DGSSYSLESIKDA 172 (230)
Q Consensus 100 ~Wp~~~~~-----~~~~~~fw~hEW~KHGtC~~~~~-~~~~YF~~al~L~~~~ni~~~L~~~gI~P-~~~~~~~~~i~~a 172 (230)
+||++.++ .+++..||+|||+|||||++.++ +|.+||++|++|++++|++++|+++||+| .+++|++++|++|
T Consensus 78 ~Wp~l~~~~~~~~~~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~L~~~~~l~~~L~~~gI~P~~g~~yt~~~I~~A 157 (209)
T 1sgl_A 78 YWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVA 157 (209)
T ss_dssp HSCBSCSSCEECGGGCEECHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCSSCEEEHHHHHHH
T ss_pred cCcCcccccccccCCCcchHHHHhhhcCccccccccccHHHHHHHHHHHHHHcChHHHHHHCCCcCCCCccccHHHHHHH
Confidence 99999532 23567899999999999999666 99999999999999999999999999999 5889999999999
Q ss_pred HHHHhCCCceEEeeeCCCCCceEEEEEEEEeCCCCceecCCCCCCCCCCCCCeecCCC
Q 026944 173 IKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASNFINCPVFPNGKKCGSQIEFPPF 230 (230)
Q Consensus 173 i~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C~~~i~~p~f 230 (230)
|++++|..|.|+|.++ .+|.||+||||++ .++|+|+ ..++ |++.|.||+|
T Consensus 158 i~~~~g~~p~l~C~~~----~~L~Ev~iC~~~~-~~~i~C~--~~~~-C~~~i~~p~~ 207 (209)
T 1sgl_A 158 VESAVGARPKLRCDEE----GLVQKLSLCFDKD-FKPRDCV--QVGS-CPRYVSLPEI 207 (209)
T ss_dssp HHHHHSSCCEEEECTT----SBEEEEEEEEETT-CCEECCC--CCCC-SCSEEECCCC
T ss_pred HHHHhCCCeEEEECCC----CeEEEEEEEeCCC-ccEeCCC--CCCC-CCCCeEeCCC
Confidence 9999999999999753 3899999999999 6899995 2344 9999999986
No 4
>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1
Probab=100.00 E-value=2.4e-60 Score=398.62 Aligned_cols=196 Identities=35% Similarity=0.758 Sum_probs=167.9
Q ss_pred CCCccEEEEEeecccccccCCCCccCCCC---CCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCC
Q 026944 26 ARNFDFFYFVLQWPGSYCDTAKSCCYPTT---GKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWP 102 (230)
Q Consensus 26 ~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~---~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp 102 (230)
.+.||||+|||+|||+||...+.+|.+.. +.+..+||||||||++.++.+|++|+ +..||..++.+++++|+++||
T Consensus 2 ~~~fDy~~l~l~Wpp~~C~~~~~~c~~~~C~~~~~~~~ftIHGLWP~~~~g~~p~~C~-~~~~~~~~i~~l~~~L~~~WP 80 (212)
T 1jy5_A 2 HKEFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCE-GAKYDQNEISILSNDLSKYWP 80 (212)
T ss_dssp CCCCCEEEEEEEEHHHHTCC----CTTBGGGCTTSCSCEEEEEEEEECTTSCCCCSCS-SCCCCGGGGGGGHHHHHHHSC
T ss_pred CCCceEEEEEEEcCHHHhcCCCCCCCCccccCCCCCCccEEeeeecccCCCCCCCCCC-CCCCChhhhHHHHHHHHhhCC
Confidence 47899999999999999998765665321 23568999999999988889999996 467999899999999999999
Q ss_pred CCccCCCC-----CcccccccccceeecccCc-CChHHHHHHHHHHHhhcCHHHHHHHCCCCC-CCCcccHHHHHHHHHH
Q 026944 103 TLACPSGN-----GITFWSHEWEKHGTCSESV-LNQHQYFQTALNLKNQINLLQALRTAGIVP-DGSSYSLESIKDAIKE 175 (230)
Q Consensus 103 ~~~~~~~~-----~~~fw~hEW~KHGtC~~~~-~~~~~YF~~al~L~~~~ni~~~L~~~gI~P-~~~~~~~~~i~~ai~~ 175 (230)
++..+..+ +..||+|||+|||||++.+ .+|.+||++|++|++++|++++|+++||+| ++++|++++|++||++
T Consensus 81 ~l~~~~~~~~~~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~nl~~~L~~~gI~Ps~g~~yt~~~I~~Ai~~ 160 (212)
T 1jy5_A 81 SYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQS 160 (212)
T ss_dssp BCCSSCEEETTEEESSHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCSSCCEEHHHHHHHHHH
T ss_pred cccccccccccccchhHHHHhhhhCceeCcccccCHHHHHHHHHHHHHhcCHHHHHHHcCCcCCCCceEcHHHHHHHHHH
Confidence 99644322 2389999999999999965 499999999999999999999999999999 7889999999999999
Q ss_pred HhCCCceEEeeeCCCCCceEEEEEEEEeCCCCceecCCCCCCCCCCCCCeecCCC
Q 026944 176 ASGFSPWIECNVDESGNSQLYQIYLCVDTSASNFINCPVFPNGKKCGSQIEFPPF 230 (230)
Q Consensus 176 ~~g~~p~l~C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C~~~i~~p~f 230 (230)
++|..|.|+|.+ ..|.||+||||++ .++|+||. ..++ |++.|.||+|
T Consensus 161 ~~g~~p~l~C~~-----~~l~ev~lC~~~~-~~~i~C~~-~~~~-C~~~i~~p~~ 207 (212)
T 1jy5_A 161 ALRVTPVVKCKS-----DAVEQVQICFDKT-LQLQECPS-TAST-CPSLVSLPIK 207 (212)
T ss_dssp HHSSCCEEEEET-----TEEEEEEEEECTT-SCEECCCC-CCCC-SCSEEBCCCC
T ss_pred hhCCCEEEEeCC-----CCcceEEEEEcCC-CcEecCCC-CCCC-CCCCEEeCCC
Confidence 999999999975 3699999999999 68999993 2344 9999999986
No 5
>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A*
Probab=100.00 E-value=4.6e-60 Score=390.73 Aligned_cols=188 Identities=39% Similarity=0.778 Sum_probs=165.8
Q ss_pred ccEEEEEeecccccccCC-CCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCCCccC
Q 026944 29 FDFFYFVLQWPGSYCDTA-KSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPTLACP 107 (230)
Q Consensus 29 fD~~~L~l~Wpp~~C~~~-~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~~~~~ 107 (230)
||||+|||+|||+||..+ ..+|... .+ ++||||||||++ .+.+|++|+.+ +|+..++.+++++|+.+||++.
T Consensus 1 fDy~~l~l~Wpp~~C~~~~~~~C~~~--~p-~~ftIHGLWPn~-~~~~p~~C~~~-~~~~~~~~~l~~~L~~~Wp~l~-- 73 (190)
T 1ucd_A 1 FDSFWFVQQWPPAVCSFQKSGSCPGS--GL-RTFTIHGLWPQQ-SGTSLTNCPGS-PFDITKISHLQSQLNTLWPNVL-- 73 (190)
T ss_dssp CCEEEEEEECHHHHHHTCCSSCCGGG--GC-CSCEEEEEEEEE-TTEECCSCSCC-CCCGGGGGGGHHHHHHHSCCSS--
T ss_pred CcEEEEEEECCHHHhccCCCCCCCCC--CC-CCeEEEcCCCCC-CCCCCCCCCcc-cCCccccchhhHHHHhcCCCcC--
Confidence 899999999999999886 4567532 13 799999999943 67899999864 7888888899999999999995
Q ss_pred CCCCcccccccccceeecccCcCChHHHHHHHHHHHhhcCHHHHHHHCCCCCCCCcccHHHHHHHHHHHhCCCceEEeee
Q 026944 108 SGNGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQINLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNV 187 (230)
Q Consensus 108 ~~~~~~fw~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~~~~g~~p~l~C~~ 187 (230)
.+++..||+|||+|||||+...++|.+||++|++|++++|++++|+++||+|++++|++++|++||++++|.+|.|+|.+
T Consensus 74 ~~~~~~fW~hEw~KHGTC~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~~~~~t~~~I~~ai~~~~g~~p~l~C~~ 153 (190)
T 1ucd_A 74 RANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRT 153 (190)
T ss_dssp SSCHHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHTCCHHHHHGGGTCSCSSSEEEHHHHHHHHHHHHSSCCEEEEEE
T ss_pred CCCCCchHHhccccCcEeCCCCCCHHHHHHHHHHHHHHcCHHHHHHHCCCCCCCceEeHHHHHHHHHHHHCCCeEEEecc
Confidence 34567899999999999997668999999999999999999999999999997667999999999999999999999998
Q ss_pred CCC-CCceEEEEEEEEeCCCCceecCCCCCCCCCCCCCeec
Q 026944 188 DES-GNSQLYQIYLCVDTSASNFINCPVFPNGKKCGSQIEF 227 (230)
Q Consensus 188 ~~~-~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C~~~i~~ 227 (230)
+.+ +..+|.||+||||+++.++|+||. .+ |+++|.|
T Consensus 154 ~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~---~~-C~~~~~f 190 (190)
T 1ucd_A 154 DPQTKVSYLVQVVACFAQDGSTLIDCTR---DT-CGANFIF 190 (190)
T ss_dssp CTTTCCEEEEEEEEEEETTSSSEECCCC---CC-CCSEEEC
T ss_pred CCCCCCcEEEEEEEEecCCCCeeccCCC---CC-CCCCCCC
Confidence 754 457999999999999889999997 34 9998876
No 6
>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1
Probab=100.00 E-value=8.8e-60 Score=390.81 Aligned_cols=191 Identities=33% Similarity=0.692 Sum_probs=163.9
Q ss_pred CccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCCCccC
Q 026944 28 NFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPTLACP 107 (230)
Q Consensus 28 ~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~~~~~ 107 (230)
+||||+|||+|||+||..+ .|+.+. +.+||||||||++. +.+|++|+.+..|+...+ +++++|+.+||++..+
T Consensus 1 ~fDy~~l~l~Wpp~~C~~~-~C~~~~----p~~ftIHGLWP~~~-~~~p~~C~~~~~~~~~~~-~l~~~L~~~Wp~l~~~ 73 (196)
T 1ioo_A 1 DFEYLQLVLTWPASFCYAN-HCERIA----PNNFTIHGLWPDNV-KTRLHNCKPKPTYSYFTG-KMLNDLDKHWMQLKFE 73 (196)
T ss_dssp CCSEEEEEEECHHHHHHHS-CCSSCC----CSSCEEEEEEEECS-SSCCCSCSSCCCCCCCCH-HHHHHHHHHTCCTTSC
T ss_pred CceEEEEEeeCCHHHccCC-CCCCCC----CCCcEEeceEECCC-CCCCCcCCCCCCcCchHH-HHHHHHhccCCCCCcc
Confidence 5999999999999999865 343331 36899999999985 579999986677887666 8999999999999532
Q ss_pred C---CCCcccccccccceeecccCcCChHHHHHHHHHHHhhcCHHHHHHHCCCCCCCCcccHHHHHHHHHHHhCCCceEE
Q 026944 108 S---GNGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQINLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIE 184 (230)
Q Consensus 108 ~---~~~~~fw~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~~~~g~~p~l~ 184 (230)
. .++..||+|||+|||||++.+++|.+||++|++|++++|++++|+++||+| +.+|++++|++||++++|..|.|+
T Consensus 74 ~~~~~~~~~fW~hEw~KHGTC~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P-~~~~t~~~I~~Ai~~~~g~~p~l~ 152 (196)
T 1ioo_A 74 QDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP-GSSYTFQDIFDAIKTVSQENPDIK 152 (196)
T ss_dssp HHHHHHHCHHHHHHHHHTGGGCTTTCCHHHHHHHHHHHHHTCCHHHHHHHTTCCT-TEEECHHHHHHHHHHHHSSCCEEE
T ss_pred cccccccchHHHhhCcCCcCcCCCcCCHHHHHHHHHHHHHHCCHHHHHHHCCCcc-CCCcCHHHHHHHHHHHhCCCeEEE
Confidence 1 024679999999999999977799999999999999999999999999999 556999999999999999999999
Q ss_pred eeeCCCCCceEEEEEEEEeCCCCceecCCCCCCCCCC--CCCeecCC
Q 026944 185 CNVDESGNSQLYQIYLCVDTSASNFINCPVFPNGKKC--GSQIEFPP 229 (230)
Q Consensus 185 C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~~~~~~C--~~~i~~p~ 229 (230)
|..+.++..+|.||+||||+++.++|+||.. .+ | +..|.||+
T Consensus 153 C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~--~~-C~~~~~i~fp~ 196 (196)
T 1ioo_A 153 CAEVTKGTPELYEIGICFTPNADSMFRCPQS--DT-CDKTAKVLFRR 196 (196)
T ss_dssp EECSSTTCCEEEEEEEEECTTSSSEECCCCC--CC-SCTTSCEEECC
T ss_pred eeecCCCCeEEEEEEEEEeCCCCEEeCCcCC--CC-CCCCCCeecCC
Confidence 9876555679999999999998789999963 34 9 45799985
No 7
>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1
Probab=100.00 E-value=1.1e-58 Score=385.46 Aligned_cols=192 Identities=30% Similarity=0.649 Sum_probs=165.3
Q ss_pred ccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCCCccCC
Q 026944 29 FDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPTLACPS 108 (230)
Q Consensus 29 fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~~~~~~ 108 (230)
||||+|||+|||+||..++.+|.+. +..+||||||||++.++.+|++|+. ..|+. .+.+++++|+.+||++.. .
T Consensus 1 fDy~~l~l~Wpp~~C~~~~~~C~~~---~~~~ftIHGLWP~~~~g~~p~~C~~-~~~~~-~~~~l~~~L~~~Wp~~~~-~ 74 (200)
T 1iqq_A 1 YDYFQFTQQYQLAVCNSNRTLCKDP---PDKLFTVHGLWPSNMVGPDPSKCPI-KNIRK-REKLLEHQLEIIWPNVFD-R 74 (200)
T ss_dssp CCEEEEEEEEHHHHTTSSSSCCSSC---CCSSEEEEEEEEECSSSSCCCSCCC-SCCCC-CCHHHHHHHHHHSCCSSC-G
T ss_pred CeEEEEEEECChHHhcCCCCCCCCC---CCCCeEEeecccccCCCCCCCCCCc-hhcCc-cchhhhhhhhccCCCccc-C
Confidence 8999999999999999876678642 4578999999999998889999986 46776 667899999999999942 2
Q ss_pred CCCcccccccccceeecccC-cCChHHHHHHHHHHH--hhcCHHHHHHHCCCCCCCCcccHHHHHHHHHHHh-CCCceEE
Q 026944 109 GNGITFWSHEWEKHGTCSES-VLNQHQYFQTALNLK--NQINLLQALRTAGIVPDGSSYSLESIKDAIKEAS-GFSPWIE 184 (230)
Q Consensus 109 ~~~~~fw~hEW~KHGtC~~~-~~~~~~YF~~al~L~--~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~~~~-g~~p~l~ 184 (230)
+++..||+|||+|||||+.+ +++|.+||++|++|+ +++|++++|+++||+|++++|++++|++||++++ |..|.|+
T Consensus 75 ~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~k~n~~~~L~~~~I~P~~~~~t~~~I~~Ai~~~~~g~~p~l~ 154 (200)
T 1iqq_A 75 TKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRALLDIENAIRNGADNKKPKLK 154 (200)
T ss_dssp GGHHHHHHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSSCCEECHHHHHHHHHTTTTTCCCEEE
T ss_pred CCCChHHHhhhhCCcCcCCcccCCHHHHHHHHHHHHhhcccCHHHHHHHcCCccCCCeecHHHHHHHHHHhcCCCceEEE
Confidence 45678999999999999954 489999999999999 7799999999999999777899999999999999 8999999
Q ss_pred eeeCCCCCceEEEEEEEEeCCCCceecCCCC-C--CCCCCCC-Ceec
Q 026944 185 CNVDESGNSQLYQIYLCVDTSASNFINCPVF-P--NGKKCGS-QIEF 227 (230)
Q Consensus 185 C~~~~~~~~~L~Ev~iC~d~~~~~~i~Cp~~-~--~~~~C~~-~i~~ 227 (230)
|.++ .+..+|.||+||||+++.++|+||.. . ..+.||+ .|.|
T Consensus 155 C~~~-~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~~~~~Cp~~~i~y 200 (200)
T 1iqq_A 155 CQKK-GTTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPTNNIKY 200 (200)
T ss_dssp EEEE-TTEEEEEEEEEEECTTSSSEECCSCCCCTTSTTCCCSSCEEC
T ss_pred EeeC-CCCeEEEEEEEEEECCCCeEEeCCCCCCCCCCCCCCccCcCC
Confidence 9875 34578999999999998789999874 1 1334986 6875
No 8
>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens}
Probab=100.00 E-value=7.5e-57 Score=381.39 Aligned_cols=183 Identities=31% Similarity=0.654 Sum_probs=155.7
Q ss_pred ccCCCccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCC
Q 026944 24 CAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPT 103 (230)
Q Consensus 24 ~~~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~ 103 (230)
...+.||||+|||||||+||...+.+|.. +.+.||||||||++. ++|+.+..|+.++|++++++|+.+||+
T Consensus 5 ~~~~~fD~~~lv~qWppt~C~~~~~~C~~----p~~~FTIHGLWP~~~-----~~C~~s~~f~~~~i~~l~~~L~~~WPd 75 (238)
T 3t0o_A 5 RDNHEWKKLIMVQHWPETVCEKIQNDCRD----PPDYWTIHGLWPDKS-----EGCNRSWPFNLEEIKDLLPEMRAYWPD 75 (238)
T ss_dssp -----CCEEEEEEECHHHHCCSSSGGGTS----CCSSCEEEEEEESSC-----CCCCTTSCCCGGGGGGGHHHHHHHSCC
T ss_pred cCCCCCcEEEEEEECCCccccCCCCCCCC----CccccEEcccccccc-----CCCCCCcccchhhhhHHHHHHHhhCcc
Confidence 45679999999999999999886666753 246899999999864 589877789999999999999999999
Q ss_pred CccCCCCCcccccccccceeecccC---cCChHHHHHHHHHHHhhcCHHHHHHHCCCCCCCCcccHHHHHHHHHHHhCCC
Q 026944 104 LACPSGNGITFWSHEWEKHGTCSES---VLNQHQYFQTALNLKNQINLLQALRTAGIVPDGSSYSLESIKDAIKEASGFS 180 (230)
Q Consensus 104 ~~~~~~~~~~fw~hEW~KHGtC~~~---~~~~~~YF~~al~L~~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~~~~g~~ 180 (230)
+..+++++..||+|||+|||||++. +.+|.+||++|++|++++|+.++|+++||+|+++.|++++|++||++++|..
T Consensus 76 l~~~~~~~~~fW~hEW~KHGTC~~~~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~~~yt~~~I~~Ai~~~~g~~ 155 (238)
T 3t0o_A 76 VIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVI 155 (238)
T ss_dssp CSSCCSSTHHHHHHHCCCCCHHHTTSGGGCSHHHHHHHHHHHHHHHCHHHHHHHTTCCCCSSCEEHHHHHHHHHHHHSSC
T ss_pred cccCCCCchHHHHHhhhcCceecCCccccccHHHHHHHHHHHHHHcccHHHHHhcCccCCCCcccHHHHHHHHHHHHCCC
Confidence 9755566789999999999999985 3489999999999999999999999999999655799999999999999999
Q ss_pred ceEEeeeCCCCC--ceEEEEEEEEeCCCCceecCCCC
Q 026944 181 PWIECNVDESGN--SQLYQIYLCVDTSASNFINCPVF 215 (230)
Q Consensus 181 p~l~C~~~~~~~--~~L~Ev~iC~d~~~~~~i~Cp~~ 215 (230)
|.|+|.++.+++ ++|.||+||||+++.++||||..
T Consensus 156 P~l~C~~~~~~~~~~~L~EV~iC~d~~~~~~idCp~~ 192 (238)
T 3t0o_A 156 PKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEP 192 (238)
T ss_dssp CEEEEECCC---CCCEEEEEEEEEETTTCCEECCC--
T ss_pred eEEEEecCCCCCcccEEEEEEEEeecCCCEEecCCCC
Confidence 999998765442 57999999999988899999974
No 9
>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1
Probab=100.00 E-value=4.6e-53 Score=356.63 Aligned_cols=181 Identities=33% Similarity=0.723 Sum_probs=155.1
Q ss_pred CCCccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCC--CCCCCCCCCCC-ch-----hhhHHHHh
Q 026944 26 ARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYP--SNCDPNAPFDQ-SQ-----ISDLRSSM 97 (230)
Q Consensus 26 ~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p--~~C~~~~~~d~-~~-----i~~l~~~L 97 (230)
+..||||+|+|+|+|++ . +.++||||||||++.+|.+| ++|+.+..|+. .. ..+++++|
T Consensus 21 ~p~fd~~~l~q~W~p~~--------~-----p~~~fTIHGLWP~~~~g~~pp~~~C~~s~~~~~~~~~l~~~~~~l~~~L 87 (222)
T 1bol_A 21 SPEYGLVVLNMQWAPGY--------G-----PDNAFTLHGLWPDKCSGAYAPSGGCDSNRASSSIASVIKSKDSSLYNSM 87 (222)
T ss_dssp SCSSCEEEEEEECCTTS--------S-----CTTCCEEEEEEEECTTSCBCCTTCSCSTTCCSCHHHHHHHHCHHHHHHH
T ss_pred CCCCCeEEEEEecCCCC--------C-----CCcceEEcceeecCcCCCCCccCCCCCcccccchhhhhhccchHHHHHH
Confidence 44499999999999987 1 24689999999999888899 99987666642 21 15688899
Q ss_pred hccCCCCccCCCCCcccccccccceeecccCc-----------CChHHHHHHHHHHHhhcCHHHHHHHCCCCCCCCcccH
Q 026944 98 LKNWPTLACPSGNGITFWSHEWEKHGTCSESV-----------LNQHQYFQTALNLKNQINLLQALRTAGIVPDGSSYSL 166 (230)
Q Consensus 98 ~~~Wp~~~~~~~~~~~fw~hEW~KHGtC~~~~-----------~~~~~YF~~al~L~~~~ni~~~L~~~gI~P~~~~~~~ 166 (230)
+.+||++. +++..||+|||+|||||++.+ .++.+||++|++|++++|+.++|+++||+| +.+|++
T Consensus 88 ~~~WP~l~---~~~~~fW~hEW~KHGTC~~~~~~~c~~~y~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P-~~~yt~ 163 (222)
T 1bol_A 88 LTYWPSNQ---GNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITP-GGTYTA 163 (222)
T ss_dssp HHHSCCTT---SCHHHHHHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCS-SEEEEH
T ss_pred hhcCCCcc---ccccHHHHhhhhcCeeeccccCccccccccccccHHHHHHHHHHHHHHcCcHHHHHHcCCCC-CCcCcH
Confidence 99999984 456889999999999998743 368899999999999999999999999999 445999
Q ss_pred HHHHHHHHHHhCCCceEEeeeCCCCCceEEEEEEEEeCCC-CceecCCCCCCCCCCCCCeecCC
Q 026944 167 ESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSA-SNFINCPVFPNGKKCGSQIEFPP 229 (230)
Q Consensus 167 ~~i~~ai~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~d~~~-~~~i~Cp~~~~~~~C~~~i~~p~ 229 (230)
++|++||++++|..|.|+|.+ ..|.||+||||++| .++++|+....++ ||+.|.|||
T Consensus 164 ~~I~~Ai~~~~g~~p~l~C~~-----~~L~Ev~ic~~~~g~~~~~~~~~~~~~~-C~~~i~~pp 221 (222)
T 1bol_A 164 TEMQSAIESYFGAKAKIDCSS-----GTLSDVALYFYVRGRDTYVITDALSTGS-CSGDVEYPT 221 (222)
T ss_dssp HHHHHHHHHHHSSCCEEEEET-----TEEEEEEEEEEEETTTEEEEECCSCCCS-CCSEEEECC
T ss_pred HHHHHHHHHHhCCCeEEEECC-----CEEeEEEEEEEcCCCCCeEECCCCCCCC-CCCCeEeCC
Confidence 999999999999999999973 58999999999985 6799998764455 998899997
No 10
>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A*
Probab=100.00 E-value=7.2e-51 Score=347.99 Aligned_cols=191 Identities=20% Similarity=0.419 Sum_probs=149.5
Q ss_pred ccCCCccEEEEEeecccccccCCC-------C-ccCCCCCCCC-CCceEeeecCCCCC---------CCC-CCCCCCCC-
Q 026944 24 CAARNFDFFYFVLQWPGSYCDTAK-------S-CCYPTTGKPA-ADFGIHGLWPNYND---------GSY-PSNCDPNA- 83 (230)
Q Consensus 24 ~~~~~fD~~~L~l~Wpp~~C~~~~-------~-~C~~~~~~~~-~~ftIHGLWP~~~~---------~~~-p~~C~~~~- 83 (230)
...+.||||+|||+|||+||..+. . |+.|..+.+. ..||||||||++.. +.+ |++|....
T Consensus 6 ~~~~~fDy~~LalsWppsfC~~~~~~~~~~~~~C~~p~~~~~~~~~ftIHGLWP~~~~~~~~~g~~~~~~~~~~C~~~~~ 85 (245)
T 2pqx_A 6 KQYGDFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPI 85 (245)
T ss_dssp SSSCCCCEEEEEEEEHHHHHHHHHHTTCCCCHHHHSCCCCSSGGGGEEEEEEEECCCHHHHTTTCCHHHHHHHGGGCTTT
T ss_pred CCCCCcceEEEEEecCHHHhCCCccccCCCccccCCcccCCCCCCceEEEecCCCCCCCccccccccccccccCcccCcc
Confidence 456899999999999999997742 2 4444322222 34999999998751 123 36786321
Q ss_pred ------------CCCCchh-hhHHHHhhccCCCCccCCCCCcccccccccceeecccCcCChHHHHHHHHHHHhhcCHH-
Q 026944 84 ------------PFDQSQI-SDLRSSMLKNWPTLACPSGNGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQINLL- 149 (230)
Q Consensus 84 ------------~~d~~~i-~~l~~~L~~~Wp~~~~~~~~~~~fw~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~ni~- 149 (230)
.++...+ .+++++|+.+||++. ....||+|||+|||||++ ++|.+||++|++|++++|+.
T Consensus 86 ~~~~~~~~~~~C~~~~~~l~~~l~~~L~~~WP~~~----~~~~fw~hEW~KHGTC~~--~~~~~YF~~a~~l~~~~n~~~ 159 (245)
T 2pqx_A 86 PNLPEARASRMCSSPETGLSLETAAKLSEVMPGAG----GRSCLERYEYAKHGACFG--FDPDAYFGTMVRLNQEIKESE 159 (245)
T ss_dssp TCCCCCCGGGGGGSCCCCCCHHHHHHHHHHCTTSS----TTTCHHHHHHHHHTGGGT--CCHHHHHHHHHHHHHHHHHSH
T ss_pred cccccccccccccCccccCCHHHHHHHHHhCCCCC----CcchHHHHHhhhCCeecC--CCHHHHHHHHHHHHHHhccch
Confidence 1222223 478899999999984 236799999999999999 99999999999999999764
Q ss_pred --HHHHHCCCCCCCCcccHHHHHHHHHHHhCCCc----eEEeeeCCCCCceEEEEEEEEeCC-------CCceecCCCCC
Q 026944 150 --QALRTAGIVPDGSSYSLESIKDAIKEASGFSP----WIECNVDESGNSQLYQIYLCVDTS-------ASNFINCPVFP 216 (230)
Q Consensus 150 --~~L~~~gI~P~~~~~~~~~i~~ai~~~~g~~p----~l~C~~~~~~~~~L~Ev~iC~d~~-------~~~~i~Cp~~~ 216 (230)
++|++. .+++|++++|++||++++|..| .|+|.++ ..+|.||+||||++ +.++|+||.
T Consensus 160 ~~~~l~~~----~g~~~t~~~I~~Ai~~~~g~~p~~~v~l~C~~~---~~~L~Ev~iC~~~~~~~~~~~~~~~i~cp~-- 230 (245)
T 2pqx_A 160 AGKFLADN----YGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGN---PAYLTEIQISIKADAINAPLSANSFLPQPH-- 230 (245)
T ss_dssp HHHHHHHT----TTSEEEHHHHHHHHHHHHCGGGGGGEEEEEETT---TTEEEEEEEEEEGGGTTSCCCTTSBCCCSC--
T ss_pred HHHHhhcC----CCceEcHHHHHHHHHHHhCCCCCcceEEEECCC---CCEEEEEEEEEcccccCCCccccccccCCC--
Confidence 568873 3789999999999999999876 9999853 36899999999999 668999995
Q ss_pred CCCCCCCCeecCCC
Q 026944 217 NGKKCGSQIEFPPF 230 (230)
Q Consensus 217 ~~~~C~~~i~~p~f 230 (230)
.++ ||++|.||++
T Consensus 231 ~~~-C~~~~~~~~~ 243 (245)
T 2pqx_A 231 PGN-CGKTFVIDKA 243 (245)
T ss_dssp CBS-CCSEEECCCS
T ss_pred CCC-CCCCeEeCCC
Confidence 244 9999999985
No 11
>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger}
Probab=100.00 E-value=4.7e-49 Score=336.75 Aligned_cols=188 Identities=28% Similarity=0.645 Sum_probs=155.7
Q ss_pred cCCCccEEEEEeecccccccCCCCccCCCCCCCCCCceEeeecCCCCCCCCCCCCCCCCCCC-Cch------hhhHHHHh
Q 026944 25 AARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFD-QSQ------ISDLRSSM 97 (230)
Q Consensus 25 ~~~~fD~~~L~l~Wpp~~C~~~~~~C~~~~~~~~~~ftIHGLWP~~~~~~~p~~C~~~~~~d-~~~------i~~l~~~L 97 (230)
-+..-+.++|+|.|+..-| . .+.++||||||||++.++.+|++|+.+..|+ ... ..++++.|
T Consensus 23 ~~~p~g~l~~tq~W~~~p~-------~----~p~~~fTIHGLWP~~~~g~~p~~C~~s~~~~~i~~~l~~~~~~~ll~~L 91 (247)
T 3d3z_A 23 FNSPGGSLLQTQFWDYDPS-------D----GPSDSWTIHGLWPDNCDGTYQEYCDESREYSNITSILEAQNRTELLSYM 91 (247)
T ss_dssp BCCSCCEEEEEEECCBTTB-------C----SCTTCCEEEEEEEECTTSCBCCCCCGGGCCSCHHHHHHHTTCHHHHHHH
T ss_pred ccCCCCEEEEEeecCCCCC-------C----CCccccEEeeeeccCCCCCCCCCCCCcccccchhhhhhhcchHHHHHHH
Confidence 3445699999999987532 1 1357999999999998889999998655674 222 25788999
Q ss_pred hccCCCCccCCCCCcccccccccceeecccCc-----------CChHHHHHHHHHHHhhcCHHHHHHHCCCCC-CCCccc
Q 026944 98 LKNWPTLACPSGNGITFWSHEWEKHGTCSESV-----------LNQHQYFQTALNLKNQINLLQALRTAGIVP-DGSSYS 165 (230)
Q Consensus 98 ~~~Wp~~~~~~~~~~~fw~hEW~KHGtC~~~~-----------~~~~~YF~~al~L~~~~ni~~~L~~~gI~P-~~~~~~ 165 (230)
+++||++.. ..++..||+|||+|||||++.+ .++.+||++|++|++++|+.++|+++||+| .+++|+
T Consensus 92 ~~~Wp~l~~-~~~~~~fW~hEW~KHGTC~~~~~~~C~~~y~~~~~~~~YF~~al~L~~k~n~~~~L~~~gI~P~~~~tyt 170 (247)
T 3d3z_A 92 KEYWPDYEG-ADEDESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPSEDATYK 170 (247)
T ss_dssp HHHSCCTTC-GGGHHHHHHHHHHHTGGGCGGGSGGGBSSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHTTCCCCSSCCBC
T ss_pred HhhCccccC-CCCccHHHHHhhhcCeeecccCCcccccccccccCHHHHHHHHHHHHHhcCcHHHHHHCCccCCCCceEC
Confidence 999999942 1156789999999999998743 467899999999999999999999999999 567899
Q ss_pred HHHHHHHHHHHh-CCCceEEeeeCCCCCceEEEEEEEEeCCCC----ceecCCCCCCCCCCCCC-eecCCC
Q 026944 166 LESIKDAIKEAS-GFSPWIECNVDESGNSQLYQIYLCVDTSAS----NFINCPVFPNGKKCGSQ-IEFPPF 230 (230)
Q Consensus 166 ~~~i~~ai~~~~-g~~p~l~C~~~~~~~~~L~Ev~iC~d~~~~----~~i~Cp~~~~~~~C~~~-i~~p~f 230 (230)
+++|++||++++ |..|.|+|.+ .+|.||+||||+++. ++++|+.....+ |++. |.|||+
T Consensus 171 ~~~I~~Ai~~~~~g~~p~l~C~~-----~~L~Ev~iC~~~~~~~~~~~~~~~~~~~~~~-C~~~~I~~pp~ 235 (247)
T 3d3z_A 171 LSDIEDALAAIHDGYPPYVGCED-----GALSQLYYYFNVKGSAIGGTYVASERLEDSN-CKDSGIKYPPK 235 (247)
T ss_dssp HHHHHHHHHTTTTTCCCEEEEET-----TEEEEEEEEEEEESCTTTSEEEECCCSSCBS-SCSSCBBCCCT
T ss_pred HHHHHHHHHHhcCCCCeEEEeCC-----CEEEEEEEEEecCCCccCCceeECCCCCCCC-CCCCceEeCCC
Confidence 999999999999 9999999973 589999999999872 588888764444 9975 999985
No 12
>4dvk_A E(RNS) glycoprotein; T2 ribonuclease, virus envelope glycoprotein, viral protein; HET: NAG BMA MAN; 2.21A {Bovine viral diarrhea virus} PDB: 4dw5_A* 4dvl_A* 4dvn_A* 4dw3_A* 4dw4_A* 4dwc_A* 4dwa_A* 4dw7_A*
Probab=99.89 E-value=2.8e-25 Score=175.22 Aligned_cols=74 Identities=23% Similarity=0.452 Sum_probs=63.2
Q ss_pred CCCceEeeecCCCCCCCCCCCCCCCCCCCCchhhhHHHHhhccCCCCccCCCCCcccccccccceeecccCcCChHHHHH
Q 026944 58 AADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMLKNWPTLACPSGNGITFWSHEWEKHGTCSESVLNQHQYFQ 137 (230)
Q Consensus 58 ~~~ftIHGLWP~~~~~~~p~~C~~~~~~d~~~i~~l~~~L~~~Wp~~~~~~~~~~~fw~hEW~KHGtC~~~~~~~~~YF~ 137 (230)
..+||||||||++..+.+|++|+ ..|+..++.+++++|+. |++.. ..||+|||+|||||+. ++|.+||.
T Consensus 24 ~~~FTIHGLWPdN~~gt~PsnC~--~~fd~~~I~dLl~~Ldk--PdL~~-----~~FWeHEWnKHGTCS~--ynQe~YFd 92 (165)
T 4dvk_A 24 GVNRSLHGIWPEKICTGVPSHLA--TDTELKAIHGMMDASEK--TNYTC-----CRLQRHEWNKHGWCNW--YNIEPWIL 92 (165)
T ss_dssp TCCEEEEEEECSCCCCSCCSSCC--CHHHHHTSTTCCCSCGG--GTSCS-----SHHHHHHHHHHTHHHH--SSHHHHHH
T ss_pred CCceEEEeeeCCCCCCCCccccC--cccchhhHHHHHHhhcC--CCCCc-----hHHHHHHHHcCCccCC--CCHHHHHH
Confidence 36899999999998888999997 56777777788888888 99842 2399999999999998 99999999
Q ss_pred HHHHH
Q 026944 138 TALNL 142 (230)
Q Consensus 138 ~al~L 142 (230)
.+-+.
T Consensus 93 L~~~a 97 (165)
T 4dvk_A 93 LMNKT 97 (165)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 13
>2ciw_A Chloroperoxidase; oxidoreductase, heme, iron, chloride, manganese, pyrrolidone carboxylic acid, glycoprotein, metal-binding; HET: NAG BMA MAN HEM; 1.15A {Caldariomyces fumago} SCOP: a.39.3.1 a.39.3.1 PDB: 1cpo_A* 2civ_A* 2cix_A* 2ciy_A* 2ciz_A* 2cj0_A* 2cj1_A* 2cj2_A* 2cpo_A* 2j18_A* 2j19_A* 2j5m_A*
Probab=83.94 E-value=0.48 Score=40.74 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=30.2
Q ss_pred HHHHHHHCCCCC-CCCcccHHHHHHHHHHHhCCCc
Q 026944 148 LLQALRTAGIVP-DGSSYSLESIKDAIKEASGFSP 181 (230)
Q Consensus 148 i~~~L~~~gI~P-~~~~~~~~~i~~ai~~~~g~~p 181 (230)
-+++|+++|+.| +|+.++..++..|+.+.+|..+
T Consensus 32 gLNaLANHGyLpR~G~nit~~~l~~al~~~~n~~~ 66 (299)
T 2ciw_A 32 ALNALANHGYIPHDGRAISRETLQNAFLNHMGIAN 66 (299)
T ss_dssp HHHHHHHTTSSCTTCEEECHHHHHHHHHHHHCBCH
T ss_pred HHHHHHhcCCcCCCCCccCHHHHHHHHHHhcCCCH
Confidence 467899999999 8988999999999999988654
No 14
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=35.34 E-value=9.3 Score=19.56 Aligned_cols=9 Identities=22% Similarity=0.999 Sum_probs=7.3
Q ss_pred eeccccccc
Q 026944 36 LQWPGSYCD 44 (230)
Q Consensus 36 l~Wpp~~C~ 44 (230)
.+|||+|+-
T Consensus 4 ~sWpPef~p 12 (22)
T 3ktp_B 4 INWPPEFHP 12 (26)
T ss_pred ccCCccccc
Confidence 579999974
No 15
>1dqi_A SOR, superoxide reductase; non-heme iron protein, immunoglobulin-like (IG) beta barrel fold, oxidoreductase; 1.70A {Pyrococcus furiosus} SCOP: b.1.13.1 PDB: 1do6_A 1dqk_A 2hvb_A
Probab=31.44 E-value=7.7 Score=28.84 Aligned_cols=8 Identities=63% Similarity=1.410 Sum_probs=6.2
Q ss_pred ceEeeecC
Q 026944 61 FGIHGLWP 68 (230)
Q Consensus 61 ftIHGLWP 68 (230)
=+|||||=
T Consensus 111 CNlHGLW~ 118 (124)
T 1dqi_A 111 CNIHGLWE 118 (124)
T ss_dssp ETTTEEEE
T ss_pred ecccCCEE
Confidence 35899994
No 16
>1y07_A Desulfoferrodoxin (RBO); beta-sheet, iron binding, oxidoreductase; 1.55A {Treponema pallidum subsp}
Probab=29.60 E-value=8.7 Score=28.60 Aligned_cols=7 Identities=43% Similarity=1.531 Sum_probs=5.7
Q ss_pred eEeeecC
Q 026944 62 GIHGLWP 68 (230)
Q Consensus 62 tIHGLWP 68 (230)
++||||=
T Consensus 120 NlHGLW~ 126 (128)
T 1y07_A 120 NLHGVWS 126 (128)
T ss_dssp TTTEEEE
T ss_pred cCcCcEE
Confidence 4899993
No 17
>1vzi_A Desulfoferrodoxin; ferrocyanide, microspectrophotometry, redox states, photoreduction, dinuclear iron cluster, oxidoreductase; 1.15A {Desulfovibrio baarsii} SCOP: b.1.13.1 g.41.5.2 PDB: 1vzh_A* 1vzg_A 2ji1_A 2ji2_A 2ji3_A 1dfx_A
Probab=29.49 E-value=8.7 Score=28.49 Aligned_cols=9 Identities=44% Similarity=0.929 Sum_probs=6.6
Q ss_pred CceEeeecC
Q 026944 60 DFGIHGLWP 68 (230)
Q Consensus 60 ~ftIHGLWP 68 (230)
.=++||||=
T Consensus 115 YCNlHGLW~ 123 (126)
T 1vzi_A 115 YCNIHGHWK 123 (126)
T ss_dssp EETTTEEEE
T ss_pred EEcccceEE
Confidence 345899994
No 18
>4asn_A TUBR; transcription, tubulin, FTSZ, segregation, partition; 3.50A {Bacillus megaterium}
Probab=22.51 E-value=46 Score=22.84 Aligned_cols=42 Identities=17% Similarity=0.210 Sum_probs=26.9
Q ss_pred HHHHHHHHHH--HhhcCHHHHHHHCCCCCCCCcccHHHHHHHHH
Q 026944 133 HQYFQTALNL--KNQINLLQALRTAGIVPDGSSYSLESIKDAIK 174 (230)
Q Consensus 133 ~~YF~~al~L--~~~~ni~~~L~~~gI~P~~~~~~~~~i~~ai~ 174 (230)
.+||+..++- .+.+.|+.+|.+.|-...-+.++.+.|.++|+
T Consensus 2 ~~YFE~i~~~L~~~D~SIL~~L~~~~A~~~~KAI~K~~I~D~iE 45 (101)
T 4asn_A 2 SDYFEEVMRKLTIEDVSILGWLFQNEANAVFKAIKKSSIADELE 45 (101)
T ss_dssp CHHHHHHHHTCCHHHHHHHHHHHHTTCCSGGGCEEHHHHHTTSC
T ss_pred ccHHHHHHHhCChhHHHHHHHHHhcCccceeeeecHhhHHHHHH
Confidence 3799988752 35556677888876433234567777776553
Done!