Query 026946
Match_columns 230
No_of_seqs 107 out of 266
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 03:46:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qd1_A Formiminotransferase-cy 100.0 2.1E-85 7.1E-90 599.1 19.0 204 1-216 64-277 (325)
2 1tt9_A Formimidoyltransferase- 100.0 9.2E-81 3.1E-85 600.6 21.5 205 1-217 65-279 (541)
3 2x4k_A 4-oxalocrotonate tautom 56.2 11 0.00037 24.1 3.3 33 27-59 3-38 (63)
4 1b4u_B LIGA, LIGB, protocatech 52.7 15 0.0005 32.4 4.6 68 136-205 98-190 (302)
5 1nu0_A Hypothetical protein YQ 48.0 11 0.00038 29.8 2.8 35 30-64 61-96 (138)
6 2z5b_A Protein YPL144W, DMP1; 38.3 20 0.00068 29.4 2.8 47 17-64 74-120 (151)
7 3txv_A Probable tagatose 6-pho 29.9 1.2E+02 0.0041 28.7 7.1 79 136-227 29-121 (450)
8 2fiq_A Putative tagatose 6-pho 27.7 1.2E+02 0.004 28.5 6.5 77 135-224 21-111 (420)
9 4h3d_A 3-dehydroquinate dehydr 27.3 1E+02 0.0034 26.4 5.7 50 174-224 114-166 (258)
10 3djh_A Macrophage migration in 26.6 66 0.0023 23.7 3.9 30 29-58 61-90 (114)
11 2opa_A Probable tautomerase YW 25.4 78 0.0027 20.0 3.6 26 33-58 9-34 (61)
12 3abf_A 4-oxalocrotonate tautom 24.6 89 0.0031 19.9 3.8 26 33-58 10-35 (64)
13 3m20_A 4-oxalocrotonate tautom 24.5 65 0.0022 21.1 3.2 26 33-58 8-33 (62)
14 1otf_A 4-oxalocrotonate tautom 23.7 87 0.003 19.8 3.6 26 33-58 9-34 (62)
15 2pw6_A Uncharacterized protein 23.6 79 0.0027 27.3 4.3 65 135-205 92-172 (271)
16 4dh4_A MIF; trimer, isomerase; 23.4 75 0.0026 23.2 3.6 35 24-58 54-91 (114)
17 2j6v_A UV endonuclease, UVDE; 22.6 1.5E+02 0.0052 25.7 6.0 58 168-225 76-146 (301)
18 2yy5_A Tryptophanyl-tRNA synth 22.1 1.7E+02 0.0059 26.2 6.4 81 27-151 148-234 (348)
19 3ry0_A Putative tautomerase; o 22.0 78 0.0027 20.7 3.2 26 33-58 9-34 (65)
20 3dnj_A ATP-dependent CLP prote 21.7 1.4E+02 0.0049 21.7 4.8 47 176-227 11-71 (85)
21 1mww_A Hypothetical protein HI 21.7 72 0.0025 23.8 3.3 36 23-58 55-93 (128)
22 1iv0_A Hypothetical protein; r 21.4 13 0.00043 27.8 -1.1 24 40-64 70-93 (98)
23 1u8s_A Glycine cleavage system 21.2 2.1E+02 0.0071 22.5 6.2 77 127-203 92-174 (192)
24 1ib8_A Conserved protein SP14. 20.8 42 0.0014 27.1 1.9 68 6-78 26-102 (164)
25 3mb2_A 4-oxalocrotonate tautom 20.7 83 0.0028 21.1 3.1 26 33-58 10-35 (72)
26 1zpv_A ACT domain protein; str 20.3 1.8E+02 0.0061 19.7 5.0 72 129-203 6-78 (91)
27 2kxh_B Peptide of FAR upstream 20.3 69 0.0023 19.6 2.2 16 138-153 14-29 (31)
No 1
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=100.00 E-value=2.1e-85 Score=599.08 Aligned_cols=204 Identities=27% Similarity=0.436 Sum_probs=193.0
Q ss_pred CHHHHHHhcCCCCCCcCCCCCcccccccceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHHhh
Q 026946 1 MADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRE 78 (230)
Q Consensus 1 ~~~~A~elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~la~~i~~~l~vPVyLYgaa--~p~rr~La~iRr~ 78 (230)
|+++|+++|||++|+|+|||||||||||||||+++|||||+++|+++|++||++++|||||||+| +|+|++|++|||
T Consensus 64 ~~~~A~elIDm~~H~G~HPRmGavDviPf~Pl~~~tmeec~~lA~~~g~~i~~~l~VPVyLYg~Aa~~p~rr~L~~iRr- 142 (325)
T 1qd1_A 64 AARAAYQLIDMSRHHGEHPRMGALDVCPFIPVRGVTMDECVRCAQAFGQRLAEELGVPVYLYGEAARTAGRQSLPALRA- 142 (325)
T ss_dssp HHHHHHHHCCGGGCCCSSCCSBSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHTCCEEEEETTCSSGGGSCHHHHHT-
T ss_pred HHHHHHHhccccccCCCCCCCCccceeeeeeCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeehhhcCCCccCcHHHhcc-
Confidence 57899999999999999999999999999999999999999999999999999999999999975 899999999999
Q ss_pred cCccCCCCCCCcccccCCCCC-CCCCCCCCCCCCCCCCCeeeecCCCCeeeeeeeecCCCHHHHHHHHHHhccCC-----
Q 026946 79 LGYYRPNSMGNQWAGWTMPEI-LPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG----- 152 (230)
Q Consensus 79 ~G~f~~~~~~~~~~g~~~~~~-~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~A~~IA~~vR~~~----- 152 (230)
| ||||+.++.. .+|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||++|
T Consensus 143 -G---------~yegl~e~~~~~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNVnL-t~~~~~A~~IA~~vR~~gr~~~~ 211 (325)
T 1qd1_A 143 -G---------EYEALPEKLKQAEWAPDFGPSAFVPSWGATVAGARKFLLAFNINL-LSTREQAHRIALDLREQGRGKDQ 211 (325)
T ss_dssp -T---------HHHHHHHHTTSGGGCCSBSCCCCCTTTBCEEEEECSCCEEEEEEE-SSCHHHHHHHHHHHSTTC-----
T ss_pred -c---------ccccchhhccCCCCCCCCCCCCCCCCcceEEEecCCceeeEeeec-cCcHHHHHHHHHHhhhcCCCCCC
Confidence 4 4556655444 4899999999999999999999999999999999 777999999999999999
Q ss_pred -CCCCCceEeeeecC-CCeEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCcccceeecCCCHHHHH
Q 026946 153 -GGLPTVQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIV 216 (230)
Q Consensus 153 -GGL~~VqAmg~~~~-~g~~qVS~Nl~d~~~tp~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~il 216 (230)
|||++||||||+|+ +|++||||||+||++||+|+|||+|+++|++|||+|++||++||+|.++|
T Consensus 212 pGGL~~VqAmg~~~~e~~~~qVS~Nl~d~~~t~~~~V~e~V~~~A~~~Gv~V~gse~vGl~P~~al 277 (325)
T 1qd1_A 212 PGRLKKVQAIGWYLDEKNLAQVSTNLLDFEVTGLHTVFEETCREAQELSLPVVGSQLVGLVPLKAL 277 (325)
T ss_dssp -CCSTTEEEEEEEETTTTEEEEEEEESCTTTSCHHHHHHHHHHHHHHTTCCEEEEEEESCBCHHHH
T ss_pred CCCccceEEeeEEecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCceeceEEeCcchHHHH
Confidence 99999999999985 79999999999999999999999999999999999999999999999764
No 2
>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A
Probab=100.00 E-value=9.2e-81 Score=600.64 Aligned_cols=205 Identities=27% Similarity=0.423 Sum_probs=193.3
Q ss_pred CHHHHHHhcCCCCCCcCCCCCcccccccceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeeccc--CCCCCChHHHHhh
Q 026946 1 MADAAYGAINLETHSGAHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAAA--HPTGKPLDTIRRE 78 (230)
Q Consensus 1 ~~~~A~elIDm~~H~G~HPR~GavDviPf~Pl~~~t~eec~~lA~~la~~i~~~l~vPVyLYgaa--~p~rr~La~iRr~ 78 (230)
++++|+++|||++|+|+|||||||||||||||+++|||||+++|+++|++||++++|||||||++ +|+||+|++|||
T Consensus 65 ~~~~A~~~IDm~~H~G~HPR~GavDvipf~Pl~~~t~eec~~~A~~~~~~i~~~l~vPvylYg~Aa~~p~r~~L~~iRr- 143 (541)
T 1tt9_A 65 AARTASQLIDMRKHKGEHPRMGALDVCPFIPVRGVSMDECVLCAKAFGQRLAEELNVPVYLYGEAAQMPSRQTLPAIRA- 143 (541)
T ss_pred HHHHHHHhcCccccCCCCCCCCCcCccccccCCCCCHHHHHHHHHHHHHHHhhhcCCcEEeeHhhcCCCCcCcHHHhhc-
Confidence 57899999999999999999999999999999999999999999999999999999999999965 999999999999
Q ss_pred cCccCCCCCCCcccccCCCCC-CCCCCCCCCCCCCCCCCeeeecCCCCeeeeeeeecCCCHHHHHHHHHHhccCC-----
Q 026946 79 LGYYRPNSMGNQWAGWTMPEI-LPERPNEGPIQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSARG----- 152 (230)
Q Consensus 79 ~G~f~~~~~~~~~~g~~~~~~-~~~~PD~Gp~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~A~~IA~~vR~~~----- 152 (230)
|| |||+.++.. .+|+|||||+++||++|+|+||||+||||||||| |+|+++||+||++||+||
T Consensus 144 -G~---------ye~~~~~~~~~~~~PD~Gp~~~~~~~G~t~vGAr~~liayNV~L-t~~~~~a~~IA~~vr~~gr~~~~ 212 (541)
T 1tt9_A 144 -GE---------YEALPEKLKQAEWVPDFGPSSFVPSWGATVTGARKFLIAFNINL-LSTKEQAHRIALNLREQGRGKDQ 212 (541)
T ss_pred -cc---------cccchhhccCCCCCCCCCCCCCCCCCceEEEecCcceeeeeeec-cccHHHHHHHHHHhhhcCCCCCC
Confidence 45 455554443 4899999999999999999999999999999999 899999999999999998
Q ss_pred -CCCCCceEeeeecC-CCeEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCcccceeecCCCHHHHHH
Q 026946 153 -GGLPTVQTLGLVHG-EDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFTDFSPEMIVE 217 (230)
Q Consensus 153 -GGL~~VqAmg~~~~-~g~~qVS~Nl~d~~~tp~~~V~e~v~~~A~~~Gv~V~~~y~~~f~~~~ile 217 (230)
|||++||||||+|+ +|++||||||+||++||+|+||++|+++|++|||+|+||+++|++|.+.|-
T Consensus 213 ~Ggl~~Vqamg~~~~~~~~~qVs~Nl~d~~~t~~~~v~e~v~~~A~~~gv~v~gse~vGl~P~~al~ 279 (541)
T 1tt9_A 213 PGRLKKVQGIGWYLEEKNLAQVSTNLLDFEVTALHTVYEEARREAQELNLPVVGSQLVGLVPLKALL 279 (541)
T ss_pred CCCccceeEeeEeecCCCeEEEEecccCCccCCHHHHHHHHHHHHHHcCCccccceEeccchHHHHH
Confidence 99999999999975 799999999999999999999999999999999999999999999987553
No 3
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=56.21 E-value=11 Score=24.14 Aligned_cols=33 Identities=9% Similarity=0.001 Sum_probs=27.2
Q ss_pred ccceeCC---CCCHHHHHHHHHHHHHHHhhhcCCcE
Q 026946 27 IVFHPLA---RASLDEAAWLAKAVAADIGSRFQVPV 59 (230)
Q Consensus 27 iPf~Pl~---~~t~eec~~lA~~la~~i~~~l~vPV 59 (230)
-||+=|. +.|.++.-++++.|.+.+.+.+++|-
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p~ 38 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANR 38 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCG
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCc
Confidence 4555553 78999999999999999999999883
No 4
>1b4u_B LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Sphingomonas paucimobilis} SCOP: c.56.6.1 PDB: 1bou_B
Probab=52.74 E-value=15 Score=32.36 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHhccCCCCCCCc--eEeeeecC-----------CC-----eEEEEeecCCCCCCCHHHHHHHHHHHH--
Q 026946 136 TDVAATRRIARMVSARGGGLPTV--QTLGLVHG-----------ED-----STEIACMLLEPNQVGADRVQNRVEKLA-- 195 (230)
Q Consensus 136 ~dl~~A~~IA~~vR~~~GGL~~V--qAmg~~~~-----------~g-----~~qVS~Nl~d~~~tp~~~V~e~v~~~A-- 195 (230)
.|-++|++|++.+...+ +.-. ..+++.|+ .+ +||||+|...+-..++.+.++.=+.++
T Consensus 98 G~peLA~~i~~~l~~~g--~~~~~~~~~~lDHG~~vpL~~l~p~~d~~~ipVVpisv~~~~~p~~~~~~~~~lG~aL~~~ 175 (302)
T 1b4u_B 98 GHPDLAWHIAQSLILDE--FDMTIMNQMDVDHGCTVPLSMIFGEPEEWPCKVIPFPVNVVTYPPPSGKRCFALGDSIRAA 175 (302)
T ss_dssp CCHHHHHHHHHHHHHTT--CCCEEESSCCBCHHHHHHHHHHHCSCSSCSSEEEEEEBCCSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC--CCeeccCCcCCCceeeehHHHhcCcccCCcCcEEEEeecCCCCCCCCHHHHHHHHHHHHHH
Confidence 45799999999987654 3322 23555553 12 799999988766666776666555554
Q ss_pred -----HHcCCcccce
Q 026946 196 -----AEEGLDVEKG 205 (230)
Q Consensus 196 -----~~~Gv~V~~~ 205 (230)
.+.||-|++|
T Consensus 176 ~~~~~~d~~VlIIgS 190 (302)
T 1b4u_B 176 VESFPEDLNVHVWGT 190 (302)
T ss_dssp HHTSSSCCEEEEEEE
T ss_pred HHhcCCCCCEEEEEe
Confidence 2466888876
No 5
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=48.05 E-value=11 Score=29.80 Aligned_cols=35 Identities=29% Similarity=0.260 Sum_probs=28.3
Q ss_pred eeCC-CCCHHHHHHHHHHHHHHHhhhcCCcEeeecc
Q 026946 30 HPLA-RASLDEAAWLAKAVAADIGSRFQVPVFLYAA 64 (230)
Q Consensus 30 ~Pl~-~~t~eec~~lA~~la~~i~~~l~vPVyLYga 64 (230)
.|+. +-|..+-.+.++.++++|..++++||+|.-+
T Consensus 61 lP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 5664 4455667788999999999999999999975
No 6
>2z5b_A Protein YPL144W, DMP1; proteasome, chaperone; 1.96A {Saccharomyces cerevisiae} PDB: 2z5c_A
Probab=38.29 E-value=20 Score=29.43 Aligned_cols=47 Identities=21% Similarity=0.281 Sum_probs=31.9
Q ss_pred CCCCCcccccccceeCCCCCHHHHHHHHHHHHHHHhhhcCCcEeeecc
Q 026946 17 AHPRLGVVDDIVFHPLARASLDEAAWLAKAVAADIGSRFQVPVFLYAA 64 (230)
Q Consensus 17 ~HPR~GavDviPf~Pl~~~t~eec~~lA~~la~~i~~~l~vPVyLYga 64 (230)
..|.-|--|+|.- ||-+...+--.+.|+++|+-|+.+.+.|||.==.
T Consensus 74 ~~~~~~~~~visT-~L~~t~~~~~~D~a~rlAkiLarR~~~P~YVg~S 120 (151)
T 2z5b_A 74 INLKSGGSNVVGI-PLLDTKDDRIRDMARHMATIISERFNRPCYVTWS 120 (151)
T ss_dssp -------CCEEEE-EEECCSCHHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred cccccCCCCceEE-EeeccCCccHHHHHHHHHHHHHHHhCCCeEEEee
Confidence 4455566677764 4545556778999999999999999999998533
No 7
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=29.85 E-value=1.2e+02 Score=28.72 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHhccCCCCCCCceEeeeecCCCeEEEEeecCCC--CCCC--HHHHHHHHHHHHHHcCCcc---c-ce-e
Q 026946 136 TDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEP--NQVG--ADRVQNRVEKLAAEEGLDV---E-KG-Y 206 (230)
Q Consensus 136 ~dl~~A~~IA~~vR~~~GGL~~VqAmg~~~~~g~~qVS~Nl~d~--~~tp--~~~V~e~v~~~A~~~Gv~V---~-~~-y 206 (230)
.+++..+.|-++-.+. .-| =++|+|+|-.|+ .+|+ +..+...|+.+|.+.|++| . ++ +
T Consensus 29 ~n~e~i~Ail~aAee~----------~sP---VIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDH 95 (450)
T 3txv_A 29 AHPLVIEAAMLRAHRE----------KAP---VLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDH 95 (450)
T ss_dssp CCHHHHHHHHHHHHHS----------CSC---EEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred CCHHHHHHHHHHHHHh----------CCC---EEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCC
Confidence 6777777776654442 112 368999998886 3555 5889999999999999996 2 21 1
Q ss_pred -----ecCCCHHHHHHHHHHHHHhhh
Q 026946 207 -----FTDFSPEMIVEKYMNLINATA 227 (230)
Q Consensus 207 -----~~~f~~~~ile~~~~~~~~~~ 227 (230)
..+.++++.+++..+.+....
T Consensus 96 g~~~~w~~~~~~~am~~a~e~i~~aI 121 (450)
T 3txv_A 96 LGPNPWKHLPADEAMAKAEAMITAYA 121 (450)
T ss_dssp ESSGGGTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccHHHHHHHHHHHHHHHH
Confidence 245777888887777665543
No 8
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=27.72 E-value=1.2e+02 Score=28.45 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=51.5
Q ss_pred CCCHHHHHHHHHHhccCCCCCCCceEeeeecCCCeEEEEeecCCC--CCCC--HHHHHHHHHHHHHHcCCc---ccc---
Q 026946 135 STDVAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEP--NQVG--ADRVQNRVEKLAAEEGLD---VEK--- 204 (230)
Q Consensus 135 t~dl~~A~~IA~~vR~~~GGL~~VqAmg~~~~~g~~qVS~Nl~d~--~~tp--~~~V~e~v~~~A~~~Gv~---V~~--- 204 (230)
+.+++..+.|-++-.+. .-| =++|+|+|-.|+ .+|+ +..+...|+..|.+.+++ |.=
T Consensus 21 ~~n~e~i~Ail~aAee~----------~sP---VIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlD 87 (420)
T 2fiq_A 21 SAHPLVIEAALAFDRNS----------TRK---VLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGD 87 (420)
T ss_dssp CCCHHHHHHHHHHTTTS----------CCC---EEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cCCHHHHHHHHHHHHHc----------CCC---EEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECC
Confidence 35677777776654432 222 378999998881 2356 899999999999999999 442
Q ss_pred ---ee-ecCCCHHHHHHHHHHHHH
Q 026946 205 ---GY-FTDFSPEMIVEKYMNLIN 224 (230)
Q Consensus 205 ---~y-~~~f~~~~ile~~~~~~~ 224 (230)
++ +.+.++++-++.+-+.+.
T Consensus 88 Hg~~~~w~~~~~~~am~~a~e~i~ 111 (420)
T 2fiq_A 88 HLGPNCWQQENVDAAMEKSVELVK 111 (420)
T ss_dssp EESSGGGTTSBHHHHHHHHHHHHH
T ss_pred CCCCccccccchhhhhhhHHHHHH
Confidence 23 345677777776544443
No 9
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=27.31 E-value=1e+02 Score=26.44 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=34.2
Q ss_pred eecCCCCCCCHHHHHHHHHHHHHHcCCcccceeec-CCCH--HHHHHHHHHHHH
Q 026946 174 CMLLEPNQVGADRVQNRVEKLAAEEGLDVEKGYFT-DFSP--EMIVEKYMNLIN 224 (230)
Q Consensus 174 ~Nl~d~~~tp~~~V~e~v~~~A~~~Gv~V~~~y~~-~f~~--~~ile~~~~~~~ 224 (230)
+.+.|.+..-...++..+.+.|++.|+.|+.||.. .-|| +++. ..+.++.
T Consensus 114 ~d~iDvEl~~~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~-~~~~~~~ 166 (258)
T 4h3d_A 114 VDLIDVELFMGDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIV-SRLCRMQ 166 (258)
T ss_dssp CSEEEEEGGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHH-HHHHHHH
T ss_pred chhhHHhhhccHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHH-HHHHHHH
Confidence 44566777777788888888999999999999862 2234 3444 4444443
No 10
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=26.62 E-value=66 Score=23.66 Aligned_cols=30 Identities=10% Similarity=0.267 Sum_probs=25.8
Q ss_pred ceeCCCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 29 FHPLARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 29 f~Pl~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
+.=+++.+.++.-++++.|.+-+.++|+||
T Consensus 61 v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~ 90 (114)
T 3djh_A 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRIS 90 (114)
T ss_dssp EEESSCCSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEccCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 334467899999999999999999999987
No 11
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=25.40 E-value=78 Score=20.00 Aligned_cols=26 Identities=8% Similarity=0.049 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.+.|.|+--++++.|.+.+.+.+++|
T Consensus 9 ~grs~eqk~~l~~~i~~~l~~~lg~~ 34 (61)
T 2opa_A 9 EGRTDEQKRNLVEKVTEAVKETTGAS 34 (61)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 47799999999999999999999977
No 12
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=24.58 E-value=89 Score=19.91 Aligned_cols=26 Identities=8% Similarity=0.061 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.+.|.++--++++.|.+.+.+.+++|
T Consensus 10 ~g~s~eqk~~l~~~lt~~l~~~lg~~ 35 (64)
T 3abf_A 10 EGRPPEKKRELVRRLTEMASRLLGEP 35 (64)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 36789999999999999999999976
No 13
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=24.54 E-value=65 Score=21.07 Aligned_cols=26 Identities=0% Similarity=0.078 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.+-|.|+--+|++.|.+.+.+.+++|
T Consensus 8 ~grt~eqK~~L~~~it~~~~~~lg~~ 33 (62)
T 3m20_A 8 PKLDVGKKREFVERLTSVAAEIYGMD 33 (62)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 57899999999999999999998877
No 14
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=23.71 E-value=87 Score=19.78 Aligned_cols=26 Identities=12% Similarity=0.266 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.+.|.|+--++++.|.+.+.+.+++|
T Consensus 9 ~grs~e~k~~l~~~i~~~l~~~lg~p 34 (62)
T 1otf_A 9 EGRTDEQKETLIRQVSEAMANSLDAP 34 (62)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 47799999999999999999999987
No 15
>2pw6_A Uncharacterized protein YGID; JW3007, escherichia coli structural genomics, protein structure, riken and PSI, protein structu initiative; 2.27A {Escherichia coli} SCOP: c.56.6.1
Probab=23.63 E-value=79 Score=27.35 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHhccCCCCCCCc-eEeeeecC-------------CCeEEEEeecCCCCCCCHHHHHHHHHHH--HHHc
Q 026946 135 STDVAATRRIARMVSARGGGLPTV-QTLGLVHG-------------EDSTEIACMLLEPNQVGADRVQNRVEKL--AAEE 198 (230)
Q Consensus 135 t~dl~~A~~IA~~vR~~~GGL~~V-qAmg~~~~-------------~g~~qVS~Nl~d~~~tp~~~V~e~v~~~--A~~~ 198 (230)
..|.++|++|+..+++.| +.-. ..++|.|+ --+||||+|... ++.+-++.=+.+ +++.
T Consensus 92 ~g~peLA~~i~~~l~~~g--~~~~~~~~glDHG~~vPL~~m~p~adiPVVqlSi~~~~----~p~~~~~lG~aL~~lrd~ 165 (271)
T 2pw6_A 92 PGSPALAQRLVELLAPIP--VTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSK----PAAWHFEMGRKLAALRDE 165 (271)
T ss_dssp CBCHHHHHHHHHHHTTSC--EEEESSCCCCCHHHHHHHHHHSTTCCSCEEEEEEETTS----CHHHHHHHHHHHGGGGGG
T ss_pred CCCHHHHHHHHHHHHhcC--CcccccccCCCcchhhhHHHhcCCCCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHc
Confidence 578899999999998753 3222 45666554 147999999542 344545443333 3467
Q ss_pred CCcccce
Q 026946 199 GLDVEKG 205 (230)
Q Consensus 199 Gv~V~~~ 205 (230)
||-|++|
T Consensus 166 ~VlIigS 172 (271)
T 2pw6_A 166 GIMLVAS 172 (271)
T ss_dssp TEEEEEE
T ss_pred CcEEEEe
Confidence 8988886
No 16
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=23.36 E-value=75 Score=23.24 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=29.4
Q ss_pred cccccceeC---CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 24 VDDIVFHPL---ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 24 vDviPf~Pl---~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.|-|.++=| ++.+.++.-++++.|.+-+.++|+||
T Consensus 54 ~~p~a~v~i~~ig~~~~e~~~~l~~~i~~~l~~~Lgi~ 91 (114)
T 4dh4_A 54 SDPCAFIRVASIGGITSSTNCKIAAALSAACERHLGVP 91 (114)
T ss_dssp CSCCEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCeEEEEEEEEcCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 366666655 57899999999999999999999987
No 17
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=22.55 E-value=1.5e+02 Score=25.69 Aligned_cols=58 Identities=16% Similarity=0.134 Sum_probs=38.8
Q ss_pred CeEEEEeecCCCCCCC---------HHHHHHHHHHHHHHcCCccc--ceeecCCC--HHHHHHHHHHHHHh
Q 026946 168 DSTEIACMLLEPNQVG---------ADRVQNRVEKLAAEEGLDVE--KGYFTDFS--PEMIVEKYMNLINA 225 (230)
Q Consensus 168 g~~qVS~Nl~d~~~tp---------~~~V~e~v~~~A~~~Gv~V~--~~y~~~f~--~~~ile~~~~~~~~ 225 (230)
..+++|+|+.-.-.-| ...-.+.+++.++++|++++ .+|+.|+. .+++.|..++.+..
T Consensus 76 ~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py~iNL~S~~~e~re~Si~~l~~ 146 (301)
T 2j6v_A 76 ALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQYVNPGSPDPEVVERSLAELRY 146 (301)
T ss_dssp CEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCTTCCTTCSCHHHHHHHHHHHHH
T ss_pred CEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCchhhcCCCCCHHHHHHHHHHHHH
Confidence 5688999985332221 23456788999999998654 45888884 34688877765544
No 18
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae}
Probab=22.11 E-value=1.7e+02 Score=26.16 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=47.9
Q ss_pred ccceeCCCCCHHHHHHHHHHHHHHHhhhc----CCcEeeecccCCCCCChHHHHhhcCccCCCCCCCcccccCCCCCCCC
Q 026946 27 IVFHPLARASLDEAAWLAKAVAADIGSRF----QVPVFLYAAAHPTGKPLDTIRRELGYYRPNSMGNQWAGWTMPEILPE 102 (230)
Q Consensus 27 iPf~Pl~~~t~eec~~lA~~la~~i~~~l----~vPVyLYgaa~p~rr~La~iRr~~G~f~~~~~~~~~~g~~~~~~~~~ 102 (230)
+-++|+ |..-..-++++|.+++++...+ ..|..+.-... ..
T Consensus 148 a~~vpv-G~DQ~~~lel~Rdia~r~n~~yg~~f~~P~~l~~~~~----------------------------------~~ 192 (348)
T 2yy5_A 148 PDIVPV-GNDQKQHLELTRDLAQRIQKKFKLKLRLPQFVQNKDT----------------------------------NR 192 (348)
T ss_dssp CSEEEC-CGGGHHHHHHHHHHHHHHHHHHCCCCCCCEEECCTTT----------------------------------TT
T ss_pred ccEEEe-cccHHHHHHHHHHHHHHhhhhcccccCCCeeeccccc----------------------------------cc
Confidence 335566 5666778889999999887543 35555542111 12
Q ss_pred CCCC-CC-CCCCCCCCeeeecCCCCeeeeeeeecCCCHHHHHHHHHHhccC
Q 026946 103 RPNE-GP-IQVSPARGIAMIGARPWVALYNIPIMSTDVAATRRIARMVSAR 151 (230)
Q Consensus 103 ~PD~-Gp-~~~~p~~Gat~vGAr~~liayNV~L~t~dl~~A~~IA~~vR~~ 151 (230)
-|+. || .+++.+.|-+ - =-|.|+.+.-++.+||-++.-.+
T Consensus 193 l~gL~g~~~KMSKS~~n~-~--------~~I~L~D~~~~i~~KI~~a~td~ 234 (348)
T 2yy5_A 193 IMDLFDPTKKMSKSSKNQ-N--------GVIYLDDPKEVVVKKIRQATTDS 234 (348)
T ss_dssp CBCSSCTTSBCCSSCSCG-G--------GCCBTTCCHHHHHHHHHTCCCCS
T ss_pred ccCCCCcchhcCCCCCCC-C--------ceEeecCCHHHHHHHHHhCCCCC
Confidence 2444 55 5778777611 0 01667766668888887766554
No 19
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=22.03 E-value=78 Score=20.69 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.|-|.|+--+|++.|.+.+.+.+++|
T Consensus 9 ~Grs~eqk~~L~~~it~~~~~~lg~p 34 (65)
T 3ry0_A 9 EGRSPQEVAALGEALTAAAHETLGTP 34 (65)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 47899999999999999999999987
No 20
>3dnj_A ATP-dependent CLP protease adapter protein CLPS; adaptor, protein-peptide complex, peptide binding protein; 1.15A {Caulobacter vibrioides} SCOP: d.45.1.2 PDB: 3g19_A 3gq0_A 3gq1_A 3gw1_A 3g1b_A 3g3p_A*
Probab=21.74 E-value=1.4e+02 Score=21.71 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=34.0
Q ss_pred cCCCCCCCHHHHHHHHHH--------------HHHHcCCcccceeecCCCHHHHHHHHHHHHHhhh
Q 026946 176 LLEPNQVGADRVQNRVEK--------------LAAEEGLDVEKGYFTDFSPEMIVEKYMNLINATA 227 (230)
Q Consensus 176 l~d~~~tp~~~V~e~v~~--------------~A~~~Gv~V~~~y~~~f~~~~ile~~~~~~~~~~ 227 (230)
|.|-++||..-|.+.+++ .+...|..|++.| +.++.|.+..++.+.|
T Consensus 11 l~NDd~~tme~Vv~vL~~vf~~~~e~A~~iml~VH~~G~avv~~~-----~~e~AE~k~~q~~~~a 71 (85)
T 3dnj_A 11 ILNDDYTPMEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVY-----TYEVAETKVAQVIDSA 71 (85)
T ss_dssp EECCSSSBHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSEEEEEEE-----CHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHhhCCcEEEEEe-----cHHHHHHHHHHHHHHH
Confidence 568889999888877766 4556677777766 5668888877765544
No 21
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=21.70 E-value=72 Score=23.75 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=30.2
Q ss_pred ccccccceeCC---CCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 23 VVDDIVFHPLA---RASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 23 avDviPf~Pl~---~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
-.|-++++=|. +.|.|+--++++.|.+.+.+.+++|
T Consensus 55 ~~~~~~~i~i~~~~grt~eqK~~l~~~l~~~l~~~lg~~ 93 (128)
T 1mww_A 55 RSDDYTVIEINLMAGRMEGTKKRLIKMLFSELEYKLGIR 93 (128)
T ss_dssp SCTTCEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcC
Confidence 34667777664 7899999999999999999999866
No 22
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=21.37 E-value=13 Score=27.77 Aligned_cols=24 Identities=21% Similarity=0.180 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHhhhcCCcEeeecc
Q 026946 40 AAWLAKAVAADIGSRFQVPVFLYAA 64 (230)
Q Consensus 40 c~~lA~~la~~i~~~l~vPVyLYga 64 (230)
-.+.++.++++|..+ ++||+|+-+
T Consensus 70 ~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 70 QAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred HHHHHHHHHHHHhcC-CCCEEEECC
Confidence 334455666666666 677777643
No 23
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=21.15 E-value=2.1e+02 Score=22.51 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=53.5
Q ss_pred eeeeeeecCCC-HHHHHHHHHHhccCCCCCCCceEeeee-----cCCCeEEEEeecCCCCCCCHHHHHHHHHHHHHHcCC
Q 026946 127 ALYNIPIMSTD-VAATRRIARMVSARGGGLPTVQTLGLV-----HGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGL 200 (230)
Q Consensus 127 iayNV~L~t~d-l~~A~~IA~~vR~~~GGL~~VqAmg~~-----~~~g~~qVS~Nl~d~~~tp~~~V~e~v~~~A~~~Gv 200 (230)
..|-|.+.+.| ..+-.+|+..+.+.++-+-.++..... .+++..-+.+-+.-+.......+.+....+|.++|+
T Consensus 92 ~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 171 (192)
T 1u8s_A 92 YTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDV 171 (192)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHHHHHHhCc
Confidence 34556665554 456778999999999998888877554 134554444443333466789999999999999998
Q ss_pred ccc
Q 026946 201 DVE 203 (230)
Q Consensus 201 ~V~ 203 (230)
.+.
T Consensus 172 ~~~ 174 (192)
T 1u8s_A 172 QGS 174 (192)
T ss_dssp EEE
T ss_pred eEE
Confidence 654
No 24
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=20.79 E-value=42 Score=27.12 Aligned_cols=68 Identities=18% Similarity=0.332 Sum_probs=40.8
Q ss_pred HHhcCCCCCC-cCCCCCccc-ccccceeCCCCCHHHHHHHHHHHHHHHh--hhcCCcEeee-cccCCC-C---CChHHHH
Q 026946 6 YGAINLETHS-GAHPRLGVV-DDIVFHPLARASLDEAAWLAKAVAADIG--SRFQVPVFLY-AAAHPT-G---KPLDTIR 76 (230)
Q Consensus 6 ~elIDm~~H~-G~HPR~Gav-DviPf~Pl~~~t~eec~~lA~~la~~i~--~~l~vPVyLY-gaa~p~-r---r~La~iR 76 (230)
++|.|++.+. |.++.+=+. |. | +++|+++|.++++.|...+= .+-.+|--++ +=.+|- - +...+.+
T Consensus 26 ~eLvdve~~~~g~~~~LrV~ID~----~-~gi~lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGldRpL~~~~df~ 100 (164)
T 1ib8_A 26 FELVDIEYGKIGSDMILSIFVDK----P-EGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVA 100 (164)
T ss_dssp SEEEEEEEEEETTEEEEEEEEEC----S-SCCCHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSSSCCSSHHHHH
T ss_pred cEEEEEEEEecCCCcEEEEEEEC----C-CCCCHHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCCCCCCCHHHHH
Confidence 5677777654 455544332 42 2 68999999999998888776 4434543322 435552 2 4455555
Q ss_pred hh
Q 026946 77 RE 78 (230)
Q Consensus 77 r~ 78 (230)
|-
T Consensus 101 r~ 102 (164)
T 1ib8_A 101 GA 102 (164)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 25
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=20.68 E-value=83 Score=21.14 Aligned_cols=26 Identities=35% Similarity=0.475 Sum_probs=23.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhhcCCc
Q 026946 33 ARASLDEAAWLAKAVAADIGSRFQVP 58 (230)
Q Consensus 33 ~~~t~eec~~lA~~la~~i~~~l~vP 58 (230)
.+.|.|+--+|++.|.+.+.+.+++|
T Consensus 10 ~grs~eqK~~L~~~it~~l~~~lg~p 35 (72)
T 3mb2_A 10 EGRSTEQKAELARALSAAAAAAFDVP 35 (72)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999988
No 26
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=20.35 E-value=1.8e+02 Score=19.69 Aligned_cols=72 Identities=8% Similarity=0.166 Sum_probs=45.2
Q ss_pred eeeeecCCC-HHHHHHHHHHhccCCCCCCCceEeeeecCCCeEEEEeecCCCCCCCHHHHHHHHHHHHHHcCCccc
Q 026946 129 YNIPIMSTD-VAATRRIARMVSARGGGLPTVQTLGLVHGEDSTEIACMLLEPNQVGADRVQNRVEKLAAEEGLDVE 203 (230)
Q Consensus 129 yNV~L~t~d-l~~A~~IA~~vR~~~GGL~~VqAmg~~~~~g~~qVS~Nl~d~~~tp~~~V~e~v~~~A~~~Gv~V~ 203 (230)
+-+.+...| .-+-.+|+..+.+.++-+..++.--. .+...+.+-+.=++...+.++.+.+++++.++|+.+.
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~---~~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~~~~~~~ 78 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL---DEYFTMMAVVSSDEKQDFTYLRNEFEAFGQTLNVKIN 78 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE---TTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHTEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE---cCEEEEEEEEEeCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 344454433 45557789999988876665544322 2433333322212245789999999999999997654
No 27
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=20.26 E-value=69 Score=19.61 Aligned_cols=16 Identities=25% Similarity=0.480 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhccCCC
Q 026946 138 VAATRRIARMVSARGG 153 (230)
Q Consensus 138 l~~A~~IA~~vR~~~G 153 (230)
+..||+||..|.+-++
T Consensus 14 ~~RaRQIaAKig~~~~ 29 (31)
T 2kxh_B 14 LQRARQIAAKIGGDAG 29 (31)
T ss_dssp HHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHhcCCCC
Confidence 7899999999987554
Done!