Query 026947
Match_columns 230
No_of_seqs 197 out of 1452
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 02:52:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026947.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026947hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 1.2E-53 2.7E-58 353.8 19.3 210 1-211 15-228 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 1E-52 2.3E-57 360.1 19.7 229 1-229 58-293 (296)
3 PLN00182 putative aquaporin NI 100.0 2.5E-50 5.3E-55 343.4 20.2 213 1-213 46-258 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 2.4E-49 5.1E-54 338.7 18.6 212 1-213 75-286 (298)
5 PRK05420 aquaporin Z; Provisio 100.0 4.4E-47 9.6E-52 316.5 20.4 210 1-211 6-230 (231)
6 COG0580 GlpF Glycerol uptake f 100.0 3.2E-47 6.9E-52 314.7 16.7 209 1-209 9-240 (241)
7 PLN00027 aquaporin TIP; Provis 100.0 1.4E-46 3E-51 317.3 18.8 210 1-210 24-240 (252)
8 KOG0224 Aquaporin (major intri 100.0 2.9E-47 6.2E-52 318.3 14.3 215 1-216 36-282 (316)
9 PTZ00016 aquaglyceroporin; Pro 100.0 2.7E-46 5.8E-51 321.2 20.2 212 1-212 54-293 (294)
10 PLN00166 aquaporin TIP2; Provi 100.0 3.2E-46 7E-51 314.2 19.5 209 1-209 22-237 (250)
11 PLN00167 aquaporin TIP5; Provi 100.0 1.2E-45 2.6E-50 311.5 21.1 210 1-210 26-241 (256)
12 PLN00183 putative aquaporin NI 100.0 1.9E-45 4.2E-50 312.4 18.9 212 1-213 49-260 (274)
13 PF00230 MIP: Major intrinsic 100.0 5.9E-46 1.3E-50 310.0 12.9 204 1-204 12-227 (227)
14 cd00333 MIP Major intrinsic pr 100.0 3E-43 6.4E-48 293.9 18.0 207 1-207 4-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 6.4E-42 1.4E-46 283.6 17.7 203 2-204 1-216 (216)
16 PLN00184 aquaporin NIP1; Provi 99.7 9.7E-17 2.1E-21 138.1 7.2 99 112-210 52-156 (296)
17 PLN00026 aquaporin NIP; Provi 99.7 1.3E-16 2.8E-21 137.1 6.4 100 111-210 68-173 (298)
18 PLN00183 putative aquaporin NI 99.6 4.8E-16 1E-20 132.5 6.9 106 105-210 33-147 (274)
19 PLN00166 aquaporin TIP2; Provi 99.6 2.5E-15 5.3E-20 126.9 5.9 99 111-209 15-124 (250)
20 PLN00167 aquaporin TIP5; Provi 99.6 4E-15 8.6E-20 125.9 6.7 99 112-210 20-129 (256)
21 PLN00182 putative aquaporin NI 99.6 3.1E-15 6.6E-20 128.0 5.8 98 112-209 40-143 (283)
22 cd00333 MIP Major intrinsic pr 99.5 3.1E-15 6.6E-20 125.0 4.4 97 115-211 1-104 (228)
23 PTZ00016 aquaglyceroporin; Pro 99.5 6.2E-15 1.3E-19 127.1 5.3 99 112-210 48-152 (294)
24 PRK05420 aquaporin Z; Provisio 99.5 1.2E-14 2.7E-19 121.4 6.6 97 114-210 2-105 (231)
25 PLN00027 aquaporin TIP; Provis 99.5 1.7E-14 3.7E-19 122.1 6.7 98 112-209 18-126 (252)
26 KOG0224 Aquaporin (major intri 99.5 1.7E-14 3.7E-19 121.6 5.4 100 112-211 30-136 (316)
27 COG0580 GlpF Glycerol uptake f 99.5 3.4E-14 7.5E-19 118.1 6.4 104 113-216 4-116 (241)
28 TIGR00861 MIP MIP family chann 99.4 1E-13 2.2E-18 115.0 4.4 93 119-211 1-104 (216)
29 KOG0223 Aquaporin (major intri 99.3 5E-12 1.1E-16 105.4 6.3 93 1-100 136-228 (238)
30 PF00230 MIP: Major intrinsic 99.3 2E-12 4.4E-17 107.8 3.1 99 112-210 6-116 (227)
31 COG2116 FocA Formate/nitrite f 89.4 2.5 5.5E-05 36.0 8.2 179 29-213 63-262 (265)
32 PRK11562 nitrite transporter N 84.9 9.1 0.0002 32.8 9.2 174 34-216 62-257 (268)
33 PRK10805 formate transporter; 68.8 77 0.0017 27.4 10.4 97 33-133 71-181 (285)
34 PF03033 Glyco_transf_28: Glyc 53.0 5.4 0.00012 29.6 0.5 21 50-70 6-26 (139)
35 PF04632 FUSC: Fusaric acid re 37.0 3.5E+02 0.0077 25.7 10.2 50 50-99 361-413 (650)
36 TIGR00790 fnt formate/nitrite 36.6 2.4E+02 0.0053 23.5 8.0 77 57-133 68-157 (239)
37 PRK12446 undecaprenyldiphospho 35.8 9 0.0002 33.9 -0.8 21 48-68 7-27 (352)
38 PF01226 Form_Nir_trans: Forma 33.0 1.2E+02 0.0025 25.7 5.5 101 32-134 59-171 (250)
39 PRK09979 putative rho operon l 30.1 16 0.00034 20.0 -0.1 17 162-178 5-21 (33)
40 PRK14195 camphor resistance pr 29.4 1.6E+02 0.0036 21.9 5.3 107 83-205 8-118 (125)
41 PRK14206 camphor resistance pr 28.3 2.4E+02 0.0053 21.0 6.1 108 83-204 7-118 (127)
42 PRK14212 camphor resistance pr 27.8 1.8E+02 0.0039 21.8 5.3 107 83-205 8-118 (128)
43 PRK09713 focB putative formate 26.9 4.1E+02 0.009 22.9 11.5 97 34-134 71-181 (282)
44 PF02537 CRCB: CrcB-like prote 26.9 2E+02 0.0044 20.8 5.3 110 83-203 5-114 (117)
45 KOG1330 Sugar transporter/spin 25.6 85 0.0018 29.3 3.6 28 185-212 187-214 (493)
46 PRK14217 camphor resistance pr 24.8 2.5E+02 0.0054 21.3 5.6 108 83-206 10-121 (134)
47 PRK15071 lipopolysaccharide AB 23.8 1.9E+02 0.004 25.4 5.5 57 5-61 279-336 (356)
48 PRK14200 camphor resistance pr 23.6 2.6E+02 0.0056 21.0 5.4 107 83-205 11-121 (127)
49 PRK14218 camphor resistance pr 22.4 3.4E+02 0.0074 20.5 5.9 107 83-205 14-124 (133)
50 PF13940 Ldr_toxin: Toxin Ldr, 22.1 1.1E+02 0.0023 17.5 2.2 20 189-208 13-32 (35)
51 KOG3030 Lipid phosphate phosph 21.6 96 0.0021 27.3 3.1 45 165-209 210-263 (317)
52 PRK14199 camphor resistance pr 21.3 2.9E+02 0.0063 20.7 5.3 106 83-204 11-120 (128)
53 PRK14202 camphor resistance pr 20.9 3.6E+02 0.0078 20.2 5.7 106 82-204 11-120 (128)
54 PRK14198 camphor resistance pr 20.8 3.6E+02 0.0079 20.0 6.0 106 83-204 7-116 (124)
55 PF01384 PHO4: Phosphate trans 20.7 4.7E+02 0.01 23.0 7.2 22 189-210 126-147 (326)
56 PRK14215 camphor resistance pr 20.2 3.4E+02 0.0075 20.2 5.5 110 82-207 7-120 (126)
57 PRK12446 undecaprenyldiphospho 20.1 31 0.00066 30.6 -0.3 21 160-180 7-27 (352)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-53 Score=353.79 Aligned_cols=210 Identities=47% Similarity=0.741 Sum_probs=192.3
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||++|++++|++|++...+...+...+.+.+++++|+++++.+++++++||||+|||||+++++.|++++.++..|++
T Consensus 15 ~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~v 94 (238)
T KOG0223|consen 15 IAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIV 94 (238)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHH
Confidence 48999999999999999877765455567889999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcc----ccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHH
Q 026947 81 CQVLGSTLAAGTLRLLFQEK----QDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLN 156 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~ 156 (230)
+|++|+++|+.+++.+.+.+ ........++.+..|+++.|++.||.|+++++.+..|+|+. .+.|+.||+++.+.
T Consensus 95 aQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~a~l~IG~~v~~~ 173 (238)
T KOG0223|consen 95 AQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-ELAPLAIGFSVGLN 173 (238)
T ss_pred HHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-ccHHHHHHHHHHHH
Confidence 99999999999999999864 12223355667999999999999999999999988888776 78999999999999
Q ss_pred HHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 157 VMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 157 ~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
+++.+++||++|||||+|||++..++|+++|+||++|++|+++++++|++++.++
T Consensus 174 ~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 174 ILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999999999999999998766
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1e-52 Score=360.06 Aligned_cols=229 Identities=73% Similarity=1.225 Sum_probs=201.0
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|++|++...+...+....+..++++||+++++.+++++++||+|+|||||+++++.|+++|.+.++|++
T Consensus 58 ~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~~~Yii 137 (296)
T PLN00184 58 IAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVI 137 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHHHHHHHH
Confidence 47999999999999988765433332335677899999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcccc-------ceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHH
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQD-------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTV 153 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~-------~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v 153 (230)
+|++|+++|+++++.+++.... ...++.|..+..++++.|+++|++|+++++.+.+|++..+...|+.||+++
T Consensus 138 aQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~~~~l~IG~~v 217 (296)
T PLN00184 138 SQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGELAGLAIGSTV 217 (296)
T ss_pred HHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCcchHHHHHHHH
Confidence 9999999999999998853211 122355666889999999999999999999887666655568899999999
Q ss_pred HHHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCCCccccccccccccccCC
Q 026947 154 LLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLKGAGR 229 (230)
Q Consensus 154 ~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (230)
.+.+++.+++||++|||||||||+++.+.|+++||||++|++|+++++++|+++...+++.++..++.++.|+.|+
T Consensus 218 ~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~~~~~~~~~~~~ 293 (296)
T PLN00184 218 LLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFLKTVRI 293 (296)
T ss_pred HHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhccchHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999888888888888888887665
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=2.5e-50 Score=343.44 Aligned_cols=213 Identities=62% Similarity=1.086 Sum_probs=187.1
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|+++++...+...++......++++||+++++.+++++++||+|+|||||+++++.|+++|.+.+.|++
T Consensus 46 ~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi~ 125 (283)
T PLN00182 46 IAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIG 125 (283)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999997664332222234566888999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhh
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFA 160 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~ 160 (230)
+|++|+++|+++++.+++.......++.|+.+..++++.|+++|++|+++++.+..+++..+...++.+|+.+.+.+++.
T Consensus 126 aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~V~~~~~~~ 205 (283)
T PLN00182 126 AQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMTIILNVFVA 205 (283)
T ss_pred HHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHHHHHHHHHc
Confidence 99999999999999988654445566778788899999999999999999998766665545568999999999999999
Q ss_pred cCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCCC
Q 026947 161 GPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 213 (230)
Q Consensus 161 ~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~ 213 (230)
+++||+++||||+|+++++.++|+++|+||++|++|+++++++|+++..++.+
T Consensus 206 g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~~~~ 258 (283)
T PLN00182 206 GPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFTDKP 258 (283)
T ss_pred cccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 99999999999999999999899999999999999999999999999754333
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=2.4e-49 Score=338.70 Aligned_cols=212 Identities=50% Similarity=0.823 Sum_probs=184.0
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|++++....+...++..++..++++||+++++.+++++++||+|+|||||+++++.|+++|++.+.|++
T Consensus 75 laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~Yii 154 (298)
T PLN00026 75 GAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIA 154 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHHH
Confidence 47999999999999976554332222235667889999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhh
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFA 160 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~ 160 (230)
+|++|+++|+++++.++++... ...+.|+.+..++++.|+++|++|+++++.+..|+++.+...++.+|+.+.+.+++.
T Consensus 155 aQilGAi~aa~~~~~~~~~~~~-~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl~V~~~~l~~ 233 (298)
T PLN00026 155 AQVSASICASFALKGVFHPFMS-GGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVA 233 (298)
T ss_pred HHHHHHHHHHHHHHHHhccccc-CceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHHHHHHHHHHh
Confidence 9999999999999998864221 112556778899999999999999999998766666555578999999999999999
Q ss_pred cCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCCC
Q 026947 161 GPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 213 (230)
Q Consensus 161 ~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~ 213 (230)
+++||+++||||+|+|++..++|+++|+||++|++|+++++++|+++...+++
T Consensus 234 g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~ 286 (298)
T PLN00026 234 GPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREED 286 (298)
T ss_pred cccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 99999999999999999999999999999999999999999999998654433
No 5
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=4.4e-47 Score=316.54 Aligned_cols=210 Identities=37% Similarity=0.693 Sum_probs=177.2
Q ss_pred ChHHHHHHHHHHHHhhhhhccc-cCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchh
Q 026947 1 MAEILGTYFMIFAGCASVVVNL-NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYI 79 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi 79 (230)
++||+||++|+|+++++..... .++...+...++++||+++++.+++++++||+|+|||||+++++.|++++++.+.|+
T Consensus 6 laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~~~Y~ 85 (231)
T PRK05420 6 AAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPYI 85 (231)
T ss_pred HHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHhHHHH
Confidence 4899999999999998764322 122223456689999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcccc-c-----e-----eecCCCC-ChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhH
Q 026947 80 LCQVLGSTLAAGTLRLLFQEKQD-Q-----F-----AGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGL 147 (230)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~-~-----~-----~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l 147 (230)
++|++|+++|+.+++.+++++.+ . . ..+.|+. +..++++.|+++|++|+++++... |+++.+...|+
T Consensus 86 ~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~-~~~~~~~~~p~ 164 (231)
T PRK05420 86 IAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT-DKRAPAGFAPI 164 (231)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCcchHH
Confidence 99999999999999988754221 0 0 0123332 678999999999999999999874 44444557899
Q ss_pred HHHHHHHHHHHhhcCccCcccchhhhHHHHHhhcCC--CceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 148 AVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQY--KGLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 148 ~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~--~~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
.+|+.+...+++.+++||++|||||+|+|+++.++| +++|+||++|++|+++++++|++++.++
T Consensus 165 ~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 165 AIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred HHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999998766 5899999999999999999999987543
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-47 Score=314.65 Aligned_cols=209 Identities=42% Similarity=0.655 Sum_probs=180.8
Q ss_pred ChHHHHHHHHHHHHhhhhhcccc---CCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccc
Q 026947 1 MAEILGTYFMIFAGCASVVVNLN---NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPP 77 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~ 77 (230)
++||+||++|+++|+++.+.... ++....+..++++||+++.+.+|+++++||+|+|||||+++++.|+++|++.+.
T Consensus 9 ~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~~v~~ 88 (241)
T COG0580 9 LAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWRKVLP 88 (241)
T ss_pred HHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHHHHHH
Confidence 48999999999999998764432 234456778999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHhhccc----------cceeecCCCC-ChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchh
Q 026947 78 YILCQVLGSTLAAGTLRLLFQEKQ----------DQFAGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRAIGELAG 146 (230)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~----------~~~~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~ 146 (230)
||++|++||++|+.+++.++++.. ...+++.|.. +..++++.|+++|++|++.++.+.+|++.++...|
T Consensus 89 YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~~~~~ap 168 (241)
T COG0580 89 YIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNANAGFAP 168 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcccccchH
Confidence 999999999999999999886421 1233466664 77889999999999999999998766665335899
Q ss_pred HHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc---------CCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 147 LAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS---------QYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 147 l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~---------~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
+.+|+.+...+++.++.||..+|||||+||++... ++.+.|+||++|++|+++++++|+.++.
T Consensus 169 l~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 169 LAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred HHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999542 2347999999999999999999997763
No 7
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=1.4e-46 Score=317.29 Aligned_cols=210 Identities=29% Similarity=0.429 Sum_probs=181.2
Q ss_pred ChHHHHHHHHHHHHhhhhhcc-c--cCC--CccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcc
Q 026947 1 MAEILGTYFMIFAGCASVVVN-L--NNE--KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 75 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~-~--~~~--~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 75 (230)
++||+||++|+++++++.... . ..+ ...+.+.++++||+++.+.+++++++||+|+|||+|++.++.|++++.+.
T Consensus 24 ~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~~~~~~~ 103 (252)
T PLN00027 24 LAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRG 103 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCCCCHHHH
Confidence 479999999999999875421 1 111 12345568999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCc--CcchhHHHHHHH
Q 026947 76 PPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELAGLAVGSTV 153 (230)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~--~~~~~l~ig~~v 153 (230)
+.|+++|++|+++|+.+.+...++......++.|+.+..++++.|+++|++|+++++.+..|+++. +...|+.+|+.+
T Consensus 104 ~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v 183 (252)
T PLN00027 104 ILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIV 183 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHHHHHHHHH
Confidence 999999999999999999887754333444556677889999999999999999999876555432 347899999999
Q ss_pred HHHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 154 LLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 154 ~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
...+++.+++||++|||||+|||+++.++|+++|+||++|++|+++++++|++++.+
T Consensus 184 ~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 240 (252)
T PLN00027 184 GANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIG 240 (252)
T ss_pred HHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999854
No 8
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-47 Score=318.26 Aligned_cols=215 Identities=35% Similarity=0.577 Sum_probs=185.0
Q ss_pred ChHHHHHHHHHHHHhhhhhccccC-CCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNN-EKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYI 79 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi 79 (230)
++||+||++|+++|++++.+...+ ....++..+.++||+++++.+++.+++||||+|||||+++++.||++|+|.++|+
T Consensus 36 LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~k~p~Y~ 115 (316)
T KOG0224|consen 36 LAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWKKFPVYV 115 (316)
T ss_pred HHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChhhhhHHH
Confidence 589999999999999987655433 3345677789999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccc----------------cceeecCCCC--ChhHHHHHHHHHHHHHHHhhheeeecCCC-
Q 026947 80 LCQVLGSTLAAGTLRLLFQEKQ----------------DQFAGTLPAG--SNIQAFVMEFIITFYLMFVISGVATDNRA- 140 (230)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~----------------~~~~~~~~~~--s~~~~~~~E~~~T~~l~~~~~~~~~~~~~- 140 (230)
++|++||++|++.+|..+.+.. ...+++.|.. +.+++|+.|+++|.+|+..++++ .|+|+
T Consensus 116 ~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI-~D~rN~ 194 (316)
T KOG0224|consen 116 LAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAI-TDKRNP 194 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEE-ecCCCC
Confidence 9999999999999999885321 2234456654 88999999999999999999998 45554
Q ss_pred -cCcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-----------CCCceeeeeechhHHHHHHHHHHHHHh
Q 026947 141 -IGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-----------QYKGLWIYIVAPPLGATAGAWVYNMVR 208 (230)
Q Consensus 141 -~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-----------~~~~~~vy~v~p~~Ga~~a~~l~~~~~ 208 (230)
.+.+.|+.+|+.+.+.....+..+|..+||||||+||++.. ..++.|++|++|++|+++++++|+++.
T Consensus 195 ~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~I 274 (316)
T KOG0224|consen 195 IPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFI 274 (316)
T ss_pred CCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeee
Confidence 34578999999999999999999999999999999999941 125789999999999999999999998
Q ss_pred cCCCCccc
Q 026947 209 YTDKPLRE 216 (230)
Q Consensus 209 ~~~~~~~~ 216 (230)
..+.++++
T Consensus 275 g~h~~~~~ 282 (316)
T KOG0224|consen 275 GFHIPREP 282 (316)
T ss_pred eccCCCCC
Confidence 88777443
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=2.7e-46 Score=321.22 Aligned_cols=212 Identities=32% Similarity=0.503 Sum_probs=178.3
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|+++++......+....+...++++||+++++.+++++++||+|+|||||+++++.|++++++.+.|++
T Consensus 54 laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~~~Yii 133 (294)
T PTZ00016 54 VAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFV 133 (294)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHHHHHHHH
Confidence 48999999999999987654322222234567899999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcccc-----------------ceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCc-C
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQD-----------------QFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI-G 142 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~-----------------~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~-~ 142 (230)
+|++|+++|+++++.++++..+ ..+.+.|+.+..++++.|+++|++|+++++.+.+++++. .
T Consensus 134 aQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~~ 213 (294)
T PTZ00016 134 AQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITDPNNCPAF 213 (294)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCCc
Confidence 9999999999999998764110 123345666788999999999999999999875544332 3
Q ss_pred cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhh------cCCC----ceeeeeechhHHHHHHHHHHHHHhcCCC
Q 026947 143 ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVS------SQYK----GLWIYIVAPPLGATAGAWVYNMVRYTDK 212 (230)
Q Consensus 143 ~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~------~~~~----~~~vy~v~p~~Ga~~a~~l~~~~~~~~~ 212 (230)
...|+.+|+.+.+..++.++.||++|||||||||+++. +.|+ ++|+||++|++|+++++++|+++..++.
T Consensus 214 ~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~~ 293 (294)
T PTZ00016 214 NYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPLI 293 (294)
T ss_pred CcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999999999999999999986 2454 5899999999999999999999986543
No 10
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=3.2e-46 Score=314.16 Aligned_cols=209 Identities=31% Similarity=0.511 Sum_probs=179.0
Q ss_pred ChHHHHHHHHHHHHhhhhhcc-c-cCC---CccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcc
Q 026947 1 MAEILGTYFMIFAGCASVVVN-L-NNE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 75 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~-~-~~~---~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 75 (230)
++||+||++|+|+++++.... . ..+ .......++++||+.+++.+++++++||+|+|||+|++.++.|++++.+.
T Consensus 22 ~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~~~~~~~ 101 (250)
T PLN00166 22 LSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITG 101 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHH
Confidence 479999999999999876531 1 111 12345678999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCc--CcchhHHHHHHH
Q 026947 76 PPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI--GELAGLAVGSTV 153 (230)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~--~~~~~l~ig~~v 153 (230)
++|+++|++|+++|+.+.+.+++++.....+..++.+..++++.|+++|++|+++++.+..|+++. +.+.|+.+|+.+
T Consensus 102 ~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v 181 (250)
T PLN00166 102 FFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIV 181 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 999999999999999999988764322222334456888999999999999999999876655432 347899999999
Q ss_pred HHHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 154 LLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 154 ~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
...++..+++||+++||||+|||+++.++|+++|+||++|++|+++++++|+.+..
T Consensus 182 ~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 182 GANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred HHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999998863
No 11
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=1.2e-45 Score=311.52 Aligned_cols=210 Identities=29% Similarity=0.440 Sum_probs=177.4
Q ss_pred ChHHHHHHHHHHHHhhhhhcccc--CC---CccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcc
Q 026947 1 MAEILGTYFMIFAGCASVVVNLN--NE---KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQV 75 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~--~~---~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~ 75 (230)
++||+||++|+++++++...+.. ++ ...++..++++||+++++.+++++++||+|+|||+|++.++.|+++|++.
T Consensus 26 laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~~~~~~~ 105 (256)
T PLN00167 26 LAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTA 105 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCCCcHhhh
Confidence 47999999999999988663321 11 12346778999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHHHHHHH
Q 026947 76 PPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVL 154 (230)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~ig~~v~ 154 (230)
+.|+++|++|+++|+.+.+.++++.........++.+..++++.|+++|++|+++++...++++. .+...|+.+|+.+.
T Consensus 106 ~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~pl~iGl~v~ 185 (256)
T PLN00167 106 MFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIGPLAIGLVAG 185 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchHHHHHHHH
Confidence 99999999999999999988765422111112233467789999999999999999987544332 23467999999999
Q ss_pred HHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 155 LNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 155 ~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
...+..+++||+++||||+|+|+++.++|+++|+||++|++|+++++++|++++.+
T Consensus 186 ~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~ 241 (256)
T PLN00167 186 ANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFP 241 (256)
T ss_pred HHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999899999999999999999999999998853
No 12
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=1.9e-45 Score=312.37 Aligned_cols=212 Identities=43% Similarity=0.759 Sum_probs=183.9
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++++|++++....+...++......+++.+|+.+.+.+++++++||+|+|||+|+++++.|+++|.+.++|++
T Consensus 49 laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~ 128 (274)
T PLN00183 49 LAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYIT 128 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHH
Confidence 47999999999999987654332222234566889999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhh
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFA 160 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~ 160 (230)
+|++|+++|+.+++.+++... ....+.|..+..++++.|+++|++++++++.+..++++.+...++.+|+.+.+.+++.
T Consensus 129 aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iGl~v~~~v~~~ 207 (274)
T PLN00183 129 AQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIGIAIGLAVLIT 207 (274)
T ss_pred HHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHHHHHHHHHHhc
Confidence 999999999999988886432 3344556667789999999999999999998866555445567999999999999999
Q ss_pred cCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCCC
Q 026947 161 GPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 213 (230)
Q Consensus 161 ~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~ 213 (230)
+++||+++||||+|++++...+|+++|+||++|++|+++++++|++++.+..+
T Consensus 208 g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 208 GPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred cCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999899999999999999999999999999765443
No 13
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=5.9e-46 Score=310.04 Aligned_cols=204 Identities=43% Similarity=0.696 Sum_probs=173.9
Q ss_pred ChHHHHHHHHHHHHhhhhhc-cccCCC-----ccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCc
Q 026947 1 MAEILGTYFMIFAGCASVVV-NLNNEK-----IVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQ 74 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~-~~~~~~-----~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~ 74 (230)
++||+||++++|+++++... +....+ ..+...+++++|+++.+.+++++++||+|+|||||++.++.|++++++
T Consensus 12 ~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~ 91 (227)
T PF00230_consen 12 LAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTGRISWKK 91 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTTSSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeeeeecccc
Confidence 48999999999999886542 222111 124567889999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhHHHHHHHHHHHHhhcc--ccceee--cCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcC--cchhHH
Q 026947 75 VPPYILCQVLGSTLAAGTLRLLFQEK--QDQFAG--TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIG--ELAGLA 148 (230)
Q Consensus 75 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~--~~~~~~--~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~--~~~~l~ 148 (230)
.+.|+++|++|+++|+.+++.++++. ...... +.|..+..++++.|+++|++++++++.+.+|++..+ .+.|+.
T Consensus 92 ~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~~ 171 (227)
T PF00230_consen 92 AIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPLGPLAPLA 171 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHHH
T ss_pred eeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccccccccccccee
Confidence 99999999999999999999999763 222222 344558899999999999999999999876665432 468999
Q ss_pred HHHHHHHHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHH
Q 026947 149 VGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 149 ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
+|+.+.+..+..++.||+++||||+++++++.+.|+++|+||++|++|+++|+++|
T Consensus 172 ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 172 IGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999987
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=3e-43 Score=293.88 Aligned_cols=207 Identities=47% Similarity=0.761 Sum_probs=176.6
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCC-CccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNE-KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYI 79 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi 79 (230)
++||+||++++++++++......++ ...++..++++||+.+.+.+++++++||+|+|||+|++.++.|+++|++.++|+
T Consensus 4 ~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~~y~ 83 (228)
T cd00333 4 LAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVIPYI 83 (228)
T ss_pred hHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHHHHH
Confidence 4799999999999998866443222 223456789999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccce----------eecCC--CCChhHHHHHHHHHHHHHHHhhheeeecCCC--cCcch
Q 026947 80 LCQVLGSTLAAGTLRLLFQEKQDQF----------AGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDNRA--IGELA 145 (230)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~~----------~~~~~--~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~--~~~~~ 145 (230)
++|++|+++|+.+.+.+++++.+.. .++.| +.+..++++.|+++|+++++.++....+++. .....
T Consensus 84 ~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~~~~ 163 (228)
T cd00333 84 IAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLA 163 (228)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCCCcH
Confidence 9999999999999999886432211 11223 3478899999999999999999987654432 34467
Q ss_pred hHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhcC---CCceeeeeechhHHHHHHHHHHHHH
Q 026947 146 GLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQ---YKGLWIYIVAPPLGATAGAWVYNMV 207 (230)
Q Consensus 146 ~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~---~~~~~vy~v~p~~Ga~~a~~l~~~~ 207 (230)
++.+|+.+...++..+++||+++||||++++++.++. |+++|+||++|++|+++++++|+++
T Consensus 164 ~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 164 PLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred HHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999999999975 9999999999999999999999863
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=6.4e-42 Score=283.64 Aligned_cols=203 Identities=41% Similarity=0.638 Sum_probs=171.4
Q ss_pred hHHHHHHHHHHHHhhhhhccccC---CCc--cChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCccc
Q 026947 2 AEILGTYFMIFAGCASVVVNLNN---EKI--VSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVP 76 (230)
Q Consensus 2 aEf~gT~~lv~~~~~~~~~~~~~---~~~--~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~ 76 (230)
+||+||++|+++++++....... +.. .+...++++||+.+.+.+++++++||+|+|||+|++.++.|++++++.+
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 69999999999999876542111 111 1456789999999999999999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHhhcccc-cee-ec--CCCCChhHHHHHHHHHHHHHHHhhheeeecCCC--cCcchhHHHH
Q 026947 77 PYILCQVLGSTLAAGTLRLLFQEKQD-QFA-GT--LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA--IGELAGLAVG 150 (230)
Q Consensus 77 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~-~~~-~~--~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~--~~~~~~l~ig 150 (230)
.|+++|++|+++|+.+.+.++++... ... .. .++.+..++++.|+++|++++++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999988865321 111 11 223478899999999999999999987554322 2236899999
Q ss_pred HHHHHHHHhhcCccCcccchhhhHHHHHhhc--CCCceeeeeechhHHHHHHHHHH
Q 026947 151 STVLLNVMFAGPITGASMNPARSLGPAIVSS--QYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 151 ~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~--~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
+.+...++..+++||+++||||++++++..+ +|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999875
No 16
>PLN00184 aquaporin NIP1; Provisional
Probab=99.67 E-value=9.7e-17 Score=138.06 Aligned_cols=99 Identities=22% Similarity=0.335 Sum_probs=83.8
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecC--CC-cCcc--hhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDN--RA-IGEL--AGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~--~~-~~~~--~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
+..+.++.|+++|++|++++++....+ +. .... .++.+|+++++.+++.+++||+|+||||++++++.++ +|.+
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~ 131 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQ 131 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHH
Confidence 567899999999999999998764221 11 1123 3567799999999999999999999999999999887 7999
Q ss_pred eeeeeechhHHHHHHHHHHHHHhcC
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.|+||++|++|+++|+++++.++..
T Consensus 132 ~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 132 VPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999988854
No 17
>PLN00026 aquaporin NIP; Provisional
Probab=99.66 E-value=1.3e-16 Score=137.12 Aligned_cols=100 Identities=23% Similarity=0.303 Sum_probs=84.5
Q ss_pred CChhHHHHHHHHHHHHHHHhhheeeecC-CCc--Ccc--hhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCC
Q 026947 111 GSNIQAFVMEFIITFYLMFVISGVATDN-RAI--GEL--AGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 184 (230)
Q Consensus 111 ~s~~~~~~~E~~~T~~l~~~~~~~~~~~-~~~--~~~--~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~ 184 (230)
.+.+|.++.|+++|++|+++++.....+ +.. ... .++.+|+++++.+++.+++||+|+||||++++++.++ .|.
T Consensus 68 ~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~ 147 (298)
T PLN00026 68 VSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWK 147 (298)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHH
Confidence 3677999999999999999998643222 111 112 3589999999999999999999999999999999876 789
Q ss_pred ceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 185 GLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 185 ~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
+.|+||++|++|+++|+++++.++.+
T Consensus 148 ~~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 148 HVPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999988854
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.63 E-value=4.8e-16 Score=132.51 Aligned_cols=106 Identities=26% Similarity=0.382 Sum_probs=88.3
Q ss_pred eecCCC---CChhHHHHHHHHHHHHHHHhhheeeecCCCc---Ccc--hhHHHHHHHHHHHHhhcCccCcccchhhhHHH
Q 026947 105 AGTLPA---GSNIQAFVMEFIITFYLMFVISGVATDNRAI---GEL--AGLAVGSTVLLNVMFAGPITGASMNPARSLGP 176 (230)
Q Consensus 105 ~~~~~~---~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~---~~~--~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~ 176 (230)
++..|. .+.++.++.|+++|++++++.+.+..+++.. ..+ .++.+|+.+.+.+++.+++||+|+||||++++
T Consensus 33 ~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~ 112 (274)
T PLN00183 33 FGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAF 112 (274)
T ss_pred ccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHH
Confidence 444453 3677899999999999999998865443221 122 46789999999999999999999999999999
Q ss_pred HHhhc-CCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 177 AIVSS-QYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 177 ~~~~~-~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
++.++ .|.+.|+||++|++|+++|+.+++.++..
T Consensus 113 ~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 113 ATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99977 78999999999999999999999988754
No 19
>PLN00166 aquaporin TIP2; Provisional
Probab=99.57 E-value=2.5e-15 Score=126.86 Aligned_cols=99 Identities=26% Similarity=0.374 Sum_probs=83.3
Q ss_pred CChhHHHHHHHHHHHHHHHhhheeeec--CC---C---cCc--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhh
Q 026947 111 GSNIQAFVMEFIITFYLMFVISGVATD--NR---A---IGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVS 180 (230)
Q Consensus 111 ~s~~~~~~~E~~~T~~l~~~~~~~~~~--~~---~---~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~ 180 (230)
.+..|+++.|+++|++++++.+....+ +. + ... ..++.+|+.+.+.+++.+++||+|+||||++++++.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 356789999999999999999887433 11 1 111 2567899999999999999999999999999999986
Q ss_pred c-CCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 181 S-QYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 181 ~-~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
+ +|.+.|+||++|++|+++++.+++.++.
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5 6888999999999999999999998864
No 20
>PLN00167 aquaporin TIP5; Provisional
Probab=99.57 E-value=4e-15 Score=125.94 Aligned_cols=99 Identities=21% Similarity=0.361 Sum_probs=84.6
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCC----C-c-----CcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNR----A-I-----GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 181 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~----~-~-----~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~ 181 (230)
+.++.++.|+++|++++++.++...+++ + . ....++.+|+.+.+.+++.+++||+|+|||+++++.+.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~ 99 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGH 99 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCC
Confidence 5678999999999999999988654221 0 0 1146899999999999999999999999999999999876
Q ss_pred -CCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 182 -QYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 182 -~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.|++.|+||++|++|+++++.+++.++..
T Consensus 100 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 100 ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999887643
No 21
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.56 E-value=3.1e-15 Score=128.05 Aligned_cols=98 Identities=24% Similarity=0.326 Sum_probs=83.2
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCCCc-C--c--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNRAI-G--E--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~-~--~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
+..+.++.|+++|++|+++.++.....+.. + . ...+.+|+.+.+.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~ 119 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQ 119 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHH
Confidence 456899999999999999998864432211 1 1 23568999999999999999999999999999999987 7999
Q ss_pred eeeeeechhHHHHHHHHHHHHHhc
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
.|+||++|++|+++|+++++.++.
T Consensus 120 ~~~Yi~aQ~lGa~~ga~~~~~~~~ 143 (283)
T PLN00182 120 VPLYIGAQLTGSLLASLTLRLMFN 143 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988874
No 22
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.55 E-value=3.1e-15 Score=125.00 Aligned_cols=97 Identities=30% Similarity=0.387 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHhhheeeecCCCc-----C-cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCcee
Q 026947 115 QAFVMEFIITFYLMFVISGVATDNRAI-----G-ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGLW 187 (230)
Q Consensus 115 ~~~~~E~~~T~~l~~~~~~~~~~~~~~-----~-~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~~~ 187 (230)
|.++.|+++|+++++..++...+++.. + ...++.+|+.+...++..+++||+|+|||+++++.+.++ +|++.|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 457899999999999999875443321 1 235789999999999999999999999999999999976 689999
Q ss_pred eeeechhHHHHHHHHHHHHHhcCC
Q 026947 188 IYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 188 vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
+||++|++|+++++.+++.+++++
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~ 104 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGL 104 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999998887653
No 23
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.54 E-value=6.2e-15 Score=127.12 Aligned_cols=99 Identities=32% Similarity=0.476 Sum_probs=83.7
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCCC---cC--cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNRA---IG--ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~---~~--~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
+..+.++.|+++|++++++.++...+... .. ...++.+|+.+.+.+++.+++||+|+|||+++++++.++ +|.+
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45588999999999999998876433211 11 135678999999999999999999999999999999987 7999
Q ss_pred eeeeeechhHHHHHHHHHHHHHhcC
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.|.||++|++|+++|+++.+.++++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888754
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.53 E-value=1.2e-14 Score=121.37 Aligned_cols=97 Identities=34% Similarity=0.379 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHHHHhhheeeec----CCCc-Ccc-hhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCce
Q 026947 114 IQAFVMEFIITFYLMFVISGVATD----NRAI-GEL-AGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGL 186 (230)
Q Consensus 114 ~~~~~~E~~~T~~l~~~~~~~~~~----~~~~-~~~-~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~~ 186 (230)
.|.++.|+++|++++++.+..... ++.. +.. .++.+|+.+.+.+++.+++||+|+|||+++++.+.++ +|++.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 478999999999999988774321 1111 122 3789999999999999999999999999999999876 78999
Q ss_pred eeeeechhHHHHHHHHHHHHHhcC
Q 026947 187 WIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 187 ~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
|+||++|++|+++|+.+.+.+++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999887777643
No 25
>PLN00027 aquaporin TIP; Provisional
Probab=99.52 E-value=1.7e-14 Score=122.06 Aligned_cols=98 Identities=24% Similarity=0.344 Sum_probs=81.6
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeee------cCC-C-cCc--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVAT------DNR-A-IGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 181 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~------~~~-~-~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~ 181 (230)
...+.++.|+++|++++++.++... +++ . ... ..++.+|+.+.+.+++.+++||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4568899999999999999887531 111 1 111 36899999999999999999999999999999998665
Q ss_pred -CCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 182 -QYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 182 -~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
.|.+.|+||++|++|+++++++++.+..
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6788999999999999999999987753
No 26
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.51 E-value=1.7e-14 Score=121.60 Aligned_cols=100 Identities=30% Similarity=0.429 Sum_probs=84.2
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecC----CCcCc--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCC
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDN----RAIGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 184 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~----~~~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~ 184 (230)
...|.+++||++|++|++..+++.... ...+. ...+.+|+.+++.+++++.+||+|+|||++++..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 466899999999999999988764321 11222 24589999999999999999999999999999999998 799
Q ss_pred ceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 185 GLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 185 ~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
++.+|.++|++|+++++.....+|++.
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d~ 136 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYDA 136 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877776553
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.50 E-value=3.4e-14 Score=118.09 Aligned_cols=104 Identities=32% Similarity=0.405 Sum_probs=86.0
Q ss_pred hhHHHHHHHHHHHHHHHhhheeeec----C---CCcCc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CC
Q 026947 113 NIQAFVMEFIITFYLMFVISGVATD----N---RAIGE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QY 183 (230)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~----~---~~~~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~ 183 (230)
..+.++.|+++|++|++...++... + ...+. ...+.+|+.+.+.+++.+++||+|+|||++++.++.++ +|
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~ 83 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPW 83 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCH
Confidence 3467899999999999998875421 1 11222 25789999999999999999999999999999999987 78
Q ss_pred CceeeeeechhHHHHHHHHHHHHHhcCCCCccc
Q 026947 184 KGLWIYIVAPPLGATAGAWVYNMVRYTDKPLRE 216 (230)
Q Consensus 184 ~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~~~~ 216 (230)
++...||++|++|+++++.+...+++.+..+.+
T Consensus 84 ~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 84 RKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 999999999999999999888888876554444
No 28
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.43 E-value=1e-13 Score=114.97 Aligned_cols=93 Identities=32% Similarity=0.334 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHhhheeeecC--C----Cc----CcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCcee
Q 026947 119 MEFIITFYLMFVISGVATDN--R----AI----GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGLW 187 (230)
Q Consensus 119 ~E~~~T~~l~~~~~~~~~~~--~----~~----~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~~~ 187 (230)
.|+++|++++++.+.+..+. + .. ....++.+|+.+...+++.++.||+|+|||+++++.+.++ +|++.|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 49999999999999875431 1 11 1135789999999999999999999999999999999987 799999
Q ss_pred eeeechhHHHHHHHHHHHHHhcCC
Q 026947 188 IYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 188 vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
+||++|++|+++++++++.+++++
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~ 104 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGL 104 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999887654
No 29
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.29 E-value=5e-12 Score=105.43 Aligned_cols=93 Identities=25% Similarity=0.361 Sum_probs=78.3
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
+.|++.||.+++..++.....+.+ ...++.+|+.+.+.+.+.+++||+++|||.|++..+..+. |...++||+
T Consensus 136 ~~E~ilTf~Lv~~v~~~a~d~~~~------~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~hwiYwv 208 (238)
T KOG0223|consen 136 VIEIILTFILVFTVFATATDPRRS------ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDDHWIYWV 208 (238)
T ss_pred HHHHHHHHHHhheeEEEeecCCCc------ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCcEEEEEh
Confidence 379999999999766532211111 3458889999999999999999999999999999998874 999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcc
Q 026947 81 CQVLGSTLAAGTLRLLFQEK 100 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~ 100 (230)
++++|+++++++.+.++..+
T Consensus 209 gP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 209 GPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred hHHHHHHHHHHHHHHhccCc
Confidence 99999999999998887644
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.27 E-value=2e-12 Score=107.81 Aligned_cols=99 Identities=32% Similarity=0.421 Sum_probs=80.0
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeee---cCCCc---C---c--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhh
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVAT---DNRAI---G---E--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVS 180 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~---~~~~~---~---~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~ 180 (230)
+.+|.++.|+++|+++++..+.... +...+ . . ...+.+|+.+...++..+++||+|+|||++++..+.+
T Consensus 6 ~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g 85 (227)
T PF00230_consen 6 SLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTG 85 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeee
Confidence 5678999999999999988876321 11111 0 1 2356678999999999999999999999999999988
Q ss_pred c-CCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 181 S-QYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 181 ~-~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
+ +|.+..+|+++|++|+++|+.+.+.++++
T Consensus 86 ~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~ 116 (227)
T PF00230_consen 86 RISWKKAIVYIIAQFLGAFLGALLVYALYPD 116 (227)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHSTH
T ss_pred eecccceeeEEeeccccccccccchhhcccC
Confidence 7 68889999999999999999998887755
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=89.37 E-value=2.5 Score=36.05 Aligned_cols=179 Identities=16% Similarity=0.157 Sum_probs=91.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc-----cc
Q 026947 29 SLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ-----DQ 103 (230)
Q Consensus 29 ~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----~~ 103 (230)
..+.-++.+++++.+.+++-+..==+ |--....-...|++++++.+--|.-=.+|=++|+.++..++.-.. +.
T Consensus 63 ~~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~ 140 (265)
T COG2116 63 AKLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANG 140 (265)
T ss_pred HHHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 34455666777766666554443111 222222334578999999888887777888888876665552111 00
Q ss_pred eee-----cC---CCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcCccCcccchhhhHH
Q 026947 104 FAG-----TL---PAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLG 175 (230)
Q Consensus 104 ~~~-----~~---~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~ 175 (230)
..+ .. -+.+..+.|.--+++-++.++.++..-.-+. ..-.-+.+-+-+++ ++..++.=...|=..---
T Consensus 141 ~~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~--~~~K~~~m~~pv~~--Fv~~GfeH~VANm~~i~~ 216 (265)
T COG2116 141 QWGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKD--GAAKIFAIILPVML--FVASGFEHSVANMFMIPW 216 (265)
T ss_pred hhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccc--hhhHHHHHHHHHHH--HHHcCCceeeehHHHHHH
Confidence 110 00 1224566777777788887777765422111 11122333333333 333444434455322211
Q ss_pred HHHhhc--CCCc-----eeeeeechhH-HHHHHHHHHHHHhcCCCC
Q 026947 176 PAIVSS--QYKG-----LWIYIVAPPL-GATAGAWVYNMVRYTDKP 213 (230)
Q Consensus 176 ~~~~~~--~~~~-----~~vy~v~p~~-Ga~~a~~l~~~~~~~~~~ 213 (230)
.+...+ +|.+ .-.=.+|.++ |+++-++.|.++++++.+
T Consensus 217 ~~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 217 AAVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred HHHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccc
Confidence 222222 3333 2223356666 466677888877765443
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=84.92 E-value=9.1 Score=32.82 Aligned_cols=174 Identities=9% Similarity=0.065 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc---ccceee---
Q 026947 34 SIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK---QDQFAG--- 106 (230)
Q Consensus 34 ~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~---~~~~~~--- 106 (230)
+..+++++.+.+..-+.. +| |=.......+.||.++++.+-.|.-=++|=++|+.+...+.... ......
T Consensus 62 g~~F~~GLilVi~~G~eLFTg---n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~ 138 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG---HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc---chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 445555555554443332 32 43333345667888988887777766677777766554443211 000000
Q ss_pred -----cCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc
Q 026947 107 -----TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS 181 (230)
Q Consensus 107 -----~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~ 181 (230)
.--+.+..+.|+-=+++-++.++.++.... .+.......+. +-+++ ++..+..=...|= --+...+..+
T Consensus 139 ~~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~~~-~~~~gKi~~i~--~pI~~--Fv~~GFEH~IANm-~~~~l~~~~~ 212 (268)
T PRK11562 139 HSVALAKTTAPAMVLFFKGALCNWLVCLAIWMAIR-TEGAAKFIAIW--WCLLA--FIASGYEHSVANM-TLFALSWFGH 212 (268)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHH--HHHHH--HHHcCCcchhHhH-HHHHHHHHcc
Confidence 001235566677777788888777765422 11112222222 22222 2222222223341 1222222221
Q ss_pred C-----C----CceeeeeechhHHH-HHHHHHHHHHhcCCCCccc
Q 026947 182 Q-----Y----KGLWIYIVAPPLGA-TAGAWVYNMVRYTDKPLRE 216 (230)
Q Consensus 182 ~-----~----~~~~vy~v~p~~Ga-~~a~~l~~~~~~~~~~~~~ 216 (230)
. | ++..+=.+|.++|+ ++-++.|.+.+.+++++++
T Consensus 213 ~~~~~~~~~~~~nlipvtLGNivGG~v~vg~~y~~~~~~~~~~~~ 257 (268)
T PRK11562 213 HSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVA 257 (268)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCchh
Confidence 1 1 12233457888876 5677778777755444433
No 33
>PRK10805 formate transporter; Provisional
Probab=68.77 E-value=77 Score=27.40 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc------cccee
Q 026947 33 ISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK------QDQFA 105 (230)
Q Consensus 33 ~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------~~~~~ 105 (230)
.++.+.+++.+.+..-+.. +| |--.+++ .+.||.++++.+-.|.-=++|=++|+++...+.... .....
T Consensus 71 ~~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T PRK10805 71 GGICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_pred HHHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHH
Confidence 3455555555554443443 44 5555544 578898988877555555555555554433322110 00000
Q ss_pred e-------cCCCCChhHHHHHHHHHHHHHHHhhhe
Q 026947 106 G-------TLPAGSNIQAFVMEFIITFYLMFVISG 133 (230)
Q Consensus 106 ~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~ 133 (230)
. .--+.+..+.|+-=+++-++.++.++.
T Consensus 147 ~~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 147 LNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 001235666777777788888877764
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=53.03 E-value=5.4 Score=29.62 Aligned_cols=21 Identities=24% Similarity=0.222 Sum_probs=17.7
Q ss_pred cCCcccccHHHHHHHHHhcCC
Q 026947 50 HISGAHFNPSVTIAHATCKRF 70 (230)
Q Consensus 50 ~iSGah~NPavTla~~l~g~~ 70 (230)
.-|+||+||.+.++..+..+-
T Consensus 6 ~Gt~Ghv~P~lala~~L~~rG 26 (139)
T PF03033_consen 6 GGTRGHVYPFLALARALRRRG 26 (139)
T ss_dssp ESSHHHHHHHHHHHHHHHHTT
T ss_pred cCChhHHHHHHHHHHHHhccC
Confidence 447899999999999997653
No 35
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=36.96 E-value=3.5e+02 Score=25.73 Aligned_cols=50 Identities=14% Similarity=0.120 Sum_probs=33.1
Q ss_pred cCCccccc---HHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhc
Q 026947 50 HISGAHFN---PSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE 99 (230)
Q Consensus 50 ~iSGah~N---PavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~ 99 (230)
.-++|+.- .+|..+.+-.-..+.+....++.+.++|+.+|..+...++|.
T Consensus 361 ~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~ 413 (650)
T PF04632_consen 361 GWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPH 413 (650)
T ss_pred CCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 33345443 333333344445567778888899999999999888887763
No 36
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=36.58 E-value=2.4e+02 Score=23.49 Aligned_cols=77 Identities=12% Similarity=0.185 Sum_probs=43.3
Q ss_pred cHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhc-----ccc-ceee-------cCCCCChhHHHHHHHHH
Q 026947 57 NPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQE-----KQD-QFAG-------TLPAGSNIQAFVMEFII 123 (230)
Q Consensus 57 NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~-----~~~-~~~~-------~~~~~s~~~~~~~E~~~ 123 (230)
|-.......+.||.++.+.+-.|.-=.+|=++|+.+.-.+... ++. .... .--+.+..+.++--+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4443334466888888888877776667777766555444321 011 0000 01123556666666777
Q ss_pred HHHHHHhhhe
Q 026947 124 TFYLMFVISG 133 (230)
Q Consensus 124 T~~l~~~~~~ 133 (230)
.+++.+.+..
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 37
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=35.78 E-value=9 Score=33.93 Aligned_cols=21 Identities=24% Similarity=0.273 Sum_probs=18.0
Q ss_pred HccCCcccccHHHHHHHHHhc
Q 026947 48 LGHISGAHFNPSVTIAHATCK 68 (230)
Q Consensus 48 ~~~iSGah~NPavTla~~l~g 68 (230)
.+.-+|||+.||+.++-.+..
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 456689999999999998875
No 38
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=33.03 E-value=1.2e+02 Score=25.69 Aligned_cols=101 Identities=15% Similarity=0.146 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc-----cceee
Q 026947 32 GISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ-----DQFAG 106 (230)
Q Consensus 32 ~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~-----~~~~~ 106 (230)
..++.+++++...+..-+..- --|-.......+.||.++++.+--+.-=.+|=++|+.+...+..... .....
T Consensus 59 ~~g~~F~~Gl~lIv~~g~eLf--Tgn~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 59 VGGLVFPIGLVLIVFLGGELF--TGNMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHHTHHHHHHHHHT---T--TTTCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhc--ccchHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 345555555555555444431 22656555567788899888777776666777777665544442111 00000
Q ss_pred -------cCCCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 107 -------TLPAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 107 -------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
.--+.+..+.|+-=+++.++.++.++..
T Consensus 137 ~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 137 YLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112366777777788888888887764
No 39
>PRK09979 putative rho operon leader peptide; Provisional
Probab=30.09 E-value=16 Score=20.00 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=13.3
Q ss_pred CccCcccchhhhHHHHH
Q 026947 162 PITGASMNPARSLGPAI 178 (230)
Q Consensus 162 ~~tG~~lNPA~~~~~~~ 178 (230)
.++|.++||.--|+.+.
T Consensus 5 qisgsslnpscrfssay 21 (33)
T PRK09979 5 QISGSSLNPSCRFSSAY 21 (33)
T ss_pred cccCCcCCccccccccc
Confidence 57899999988776554
No 40
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=29.42 E-value=1.6e+02 Score=21.91 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-. .... ..+..-++.-++.-.++++++-+..-... ++... ...+...+. .-.+|.
T Consensus 8 ~~Gg~~Ga~~Ry~l~~-~~~~---~~~~~fP~gTl~vNi~GsfllG~~~~~~~-~~~~~--~~~~~~~l~----tGf~Gg 76 (125)
T PRK14195 8 AAGGALGSVARYLVGV-GALR---LMGPAFPWGTLAVNVTGSFLIGVLAGLLA-HRWNA--SQEWRLFLI----VGVLGG 76 (125)
T ss_pred HHHHHHHHHHHHHHHH-HHHh---ccCCCCchHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHH----hHhccC
Confidence 4788888876555432 1111 11111234467888889998866543221 11111 112222222 223344
Q ss_pred ccCcccchhhhHHHHHhh----cCCCceeeeeechhHHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVYN 205 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~----~~~~~~~vy~v~p~~Ga~~a~~l~~ 205 (230)
.|- --++...... ++|.....|.+..++++++++.+=.
T Consensus 77 fTT-----FSTf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 118 (125)
T PRK14195 77 FTT-----FSAFSLDAALLIERGAYGAAAAYIAASVVLSVAALFAGL 118 (125)
T ss_pred ccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 441 1123333222 4565667899999999999886543
No 41
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=28.32 E-value=2.4e+02 Score=21.04 Aligned_cols=108 Identities=14% Similarity=0.050 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-+.+-. ..+. ..+..-++.-+..-.+++|++-+.......+++. ....++...+.. -++|.
T Consensus 7 ~~Gg~lGa~~Ry~l~~-~~~~---~~~~~fp~gTl~vNi~GsfllG~~~~~~~~~~~~-~~~~~~~~~l~t----Gf~Gg 77 (127)
T PRK14206 7 ALGSALGGTLRFWLSG-LVAE---ATGGTFPWGTLVINVSGSFLIGFFATLTGPEGRV-FVGESWRLFVMV----GVCGG 77 (127)
T ss_pred HHhHHHHHHHHHHHHH-HHhh---cccCCCchHHHHHHHHHHHHHHHHHHHHhhcccc-cCCHHHHHHHHH----HHccc
Confidence 4788888876555432 1111 1111223456888899999987664332111110 111123322222 22344
Q ss_pred ccCcccchhhhHHHHHh----hcCCCceeeeeechhHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~----~~~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
.|- --++..... .++|.....|++..++++++++++=
T Consensus 78 fTT-----FSTf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~~G 118 (127)
T PRK14206 78 FTT-----FSSFSLQTLNLARDGDWLRAGGNVVLSVVFCLLAVWLG 118 (127)
T ss_pred ccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 431 112332222 2456566689999999999987653
No 42
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=27.79 E-value=1.8e+02 Score=21.83 Aligned_cols=107 Identities=16% Similarity=0.099 Sum_probs=54.4
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-.. .+.. .+..-++.-++.-.+++|++-+..-.. .+... ....+...+.. -++|.
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~-~~~~---~~~~fP~~Tl~vN~~GsfllG~~~~~~-~~~~~--~~~~~~~~l~t----GflGg 76 (128)
T PRK14212 8 AAGGALGAVSRYGLNNL-TVKL---LGDSFPYGTLIVNCLGCFVLGFLMQWG-FSSDS--HNTHLKLMLTA----GFLGA 76 (128)
T ss_pred HHHHHHHHHHHHHHHHH-HHhc---ccCCCchHHHHHHHHHHHHHHHHHHHH-HhccC--CCHHHHHHHHh----hHhcC
Confidence 37888888766654421 1111 111123456888889999987654322 11111 11123322222 22344
Q ss_pred ccCcccchhhhHHHHHh----hcCCCceeeeeechhHHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVYN 205 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~----~~~~~~~~vy~v~p~~Ga~~a~~l~~ 205 (230)
.|- --++..... .++|.....|+...++++++++.+=.
T Consensus 77 fTT-----FSTf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 118 (128)
T PRK14212 77 FTT-----FSTFSYETLDCFKAGDYFNGFSNILANVLLGLLMVFIGA 118 (128)
T ss_pred ccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 112222222 23565667899999999998876643
No 43
>PRK09713 focB putative formate transporter; Provisional
Probab=26.91 E-value=4.1e+02 Score=22.90 Aligned_cols=97 Identities=8% Similarity=0.089 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc------ccceee
Q 026947 34 SIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK------QDQFAG 106 (230)
Q Consensus 34 ~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~------~~~~~~ 106 (230)
++.+.+++.+.+..-+.. +| |=...++ ...||.++++.+-.+.-=++|=++|+.+...+.... ......
T Consensus 71 g~~F~vGLilIv~~g~ELfTg---N~~~~~~-~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~ 146 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS---SVMTVMA-KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGV 146 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH---HHHHHHH-HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHH
Confidence 445555555555443333 32 2222233 468888888877544444444444444333322110 000000
Q ss_pred -------cCCCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 107 -------TLPAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 107 -------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
.--+.+..+.|+--+++-++.++.++..
T Consensus 147 ~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 147 AVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012366777888888888888887753
No 44
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=26.87 E-value=2e+02 Score=20.78 Aligned_cols=110 Identities=15% Similarity=0.042 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-+.+....+ ..+.......+..-.++++++-+..-....+. .......+..++.... +|.
T Consensus 5 ~lgg~~Ga~~R~~l~~~~~-----~~~~~~p~gt~~vN~~g~fllG~~~~~~~~~~-~~~~~~~~~~~l~~Gf----~G~ 74 (117)
T PF02537_consen 5 ALGGALGALLRYGLSKLLN-----RRWGWFPWGTLLVNVLGCFLLGLLAGLLAKKL-ASKWSPSLRLFLGTGF----CGG 74 (117)
T ss_pred HHHHHHHHHHHHHHHHHhc-----cccCCCchHHHHHHHHHHHHHHHHHHHHHHhc-cccCCHHHHHHHHHHH----cch
Confidence 4788888877666553211 11111255678888999998877654322111 1112223333333322 122
Q ss_pred ccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWV 203 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l 203 (230)
.|--+ -.+.......-.++|.....|.+..+.++++++.+
T Consensus 75 lTTfS-t~~~e~~~l~~~~~~~~~~~y~~~s~~~g~~~~~~ 114 (117)
T PF02537_consen 75 LTTFS-TFILETFQLFESGRWFRALLYVLVSVILGLLAAWL 114 (117)
T ss_pred HHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22000 00111111111235667788999999988888764
No 45
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=25.56 E-value=85 Score=29.32 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=22.7
Q ss_pred ceeeeeechhHHHHHHHHHHHHHhcCCC
Q 026947 185 GLWIYIVAPPLGATAGAWVYNMVRYTDK 212 (230)
Q Consensus 185 ~~~vy~v~p~~Ga~~a~~l~~~~~~~~~ 212 (230)
+.|-|++.+.+|.+++.++.-+...+++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 6899999999999999888766654443
No 46
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=24.84 E-value=2.5e+02 Score=21.32 Aligned_cols=108 Identities=12% Similarity=0.105 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-. ..+.. .+..-++.-++.-.+++|++-+..-... ++... ...+...+.. -++|.
T Consensus 10 ~iGG~lGa~~Ry~l~~-~~~~~---~~~~fP~gTl~VNi~GsfllG~~~~~~~-~~~~~--~~~~~~~l~t----GflGg 78 (134)
T PRK14217 10 AIGGSLGAMSRYLVTI-MAQNA---WGIKFPYGTLLVNTLGSFLAGFFLIVLV-GRFSA--EESFRLFLFT----GFLGA 78 (134)
T ss_pred HHHHHHHHHHHHHHHH-HHHhh---cCCCCcHHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHHH----HHhch
Confidence 3788888875554432 11111 1112234568888899998876653221 11111 1112222222 22233
Q ss_pred ccCcccchhhhHHHHHh----hcCCCceeeeeechhHHHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVYNM 206 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~----~~~~~~~~vy~v~p~~Ga~~a~~l~~~ 206 (230)
.|- --+++.... .++|.....|++..++++++++++=..
T Consensus 79 fTT-----FSTf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~ 121 (134)
T PRK14217 79 FTT-----FSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFIGTL 121 (134)
T ss_pred hcc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 112332222 245656778999999999998866443
No 47
>PRK15071 lipopolysaccharide ABC transporter permease; Provisional
Probab=23.85 E-value=1.9e+02 Score=25.40 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccC-CcccccHHHH
Q 026947 5 LGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHI-SGAHFNPSVT 61 (230)
Q Consensus 5 ~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~i-SGah~NPavT 61 (230)
+.+..+++++......+....+......+++.+|+.+......+... ..++++|.+.
T Consensus 279 l~~~~~~lla~~~~~~~~R~~~~~~~i~~~i~~~~~y~~~~~~~~~lg~~g~l~P~la 336 (356)
T PRK15071 279 LSVAVMMLMALSFIFGPLRSVTMGARVVTGISFGFVFYVSNEIFGPLSLVYGIPPIIG 336 (356)
T ss_pred HHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH
Confidence 34555666655443332222221223345556666666555555554 3467888654
No 48
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=23.58 E-value=2.6e+02 Score=21.02 Aligned_cols=107 Identities=13% Similarity=0.132 Sum_probs=53.9
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-.. ... ..+..-++.-+..-.+++|++-+..-... ++... ...+...+.+ -++|.
T Consensus 11 ~~GG~lGa~~Ry~l~~~-~~~---~~~~~fP~gTl~VN~~GsfllG~~~~~~~-~~~~~--~~~~~~~l~t----Gf~Gg 79 (127)
T PRK14200 11 ALGGAFGACSRYLVSEL-CVV---LLGRGFPYGTLTVNVVGSFIMGLLIAAFE-NELLA--TEPWRQIIGL----GFLGA 79 (127)
T ss_pred HHHHHHHHHHHHHHHHH-HHh---hcCCCCchHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHHH----HHhcc
Confidence 37888888765544321 110 11112234567888889998876643321 11111 1112222221 22333
Q ss_pred ccCcccchhhhHHHHHhh----cCCCceeeeeechhHHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVYN 205 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~----~~~~~~~vy~v~p~~Ga~~a~~l~~ 205 (230)
.|- --+++..... ++|.....|++..++++++++.+=.
T Consensus 80 fTT-----FSTf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 121 (127)
T PRK14200 80 LTT-----FSTFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGF 121 (127)
T ss_pred chh-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 1123332222 3555567899999999999887643
No 49
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=22.37 E-value=3.4e+02 Score=20.52 Aligned_cols=107 Identities=15% Similarity=0.059 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-..-.. ..+..-++.-++.-.+++|++-+..-... ++... ..++...+.. -++|.
T Consensus 14 ~~GG~~Ga~lRy~l~~~~~~----~~~~~fP~gTl~VNv~GsfllG~l~~~~~-~~~~~--~~~~~~~l~t----GflGg 82 (133)
T PRK14218 14 MLGGAFGSGLRFVIGSCLLQ----RFGAGFPWGTLAVNLIGSFVAGFLLIWLD-KRGSA--GWPWRMLLIV----GLIGG 82 (133)
T ss_pred HHHHHHHHHHHHHHHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHHH----HHhch
Confidence 37888888766654321111 11112344578888999999866543221 11111 1122222222 22233
Q ss_pred ccCcccchhhhHHHHHhh----cCCCceeeeeechhHHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVYN 205 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~----~~~~~~~vy~v~p~~Ga~~a~~l~~ 205 (230)
.|- --+++..... ++|.....|++..++++++++.+=.
T Consensus 83 fTT-----FSTf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 124 (133)
T PRK14218 83 LTT-----FSSLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGA 124 (133)
T ss_pred hcc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 1123332222 3555566799999999999887643
No 50
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.06 E-value=1.1e+02 Score=17.52 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=15.6
Q ss_pred eeechhHHHHHHHHHHHHHh
Q 026947 189 YIVAPPLGATAGAWVYNMVR 208 (230)
Q Consensus 189 y~v~p~~Ga~~a~~l~~~~~ 208 (230)
=..+|.+.+++++++...+.
T Consensus 13 DLAAP~iagIi~s~iv~w~~ 32 (35)
T PF13940_consen 13 DLAAPIIAGIIASLIVGWLR 32 (35)
T ss_pred HhHhHHHHHHHHHHHHHHHH
Confidence 35789999999988877654
No 51
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=21.57 E-value=96 Score=27.32 Aligned_cols=45 Identities=24% Similarity=0.465 Sum_probs=33.5
Q ss_pred CcccchhhhHHHHHhh--------cCCCceee-eeechhHHHHHHHHHHHHHhc
Q 026947 165 GASMNPARSLGPAIVS--------SQYKGLWI-YIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 165 G~~lNPA~~~~~~~~~--------~~~~~~~v-y~v~p~~Ga~~a~~l~~~~~~ 209 (230)
+-.+.|-..|++.... .|++++|. =+.|-++|.++|...++....
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~ 263 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFP 263 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4456777777776654 27889997 567888899999999887754
No 52
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=21.35 E-value=2.9e+02 Score=20.70 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-+.+-..-.+ ..+..-++.-+..-.++++++-+..-.. .+.+.. ...+...+.. -.+|.
T Consensus 11 ~~GG~~GA~~Ry~l~~~~~~----~~~~~fP~gTl~VNi~GsfllG~~~~~~-~~~~~~--~~~~~~~l~t----Gf~Gg 79 (128)
T PRK14199 11 GLGGFIGASLRYLISIFAAK----MFNGNFPYGTLIVNIVGALLIGFIMEFS-MDTALI--SSNMKLFLTT----GIMGG 79 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHh----hccCCCchHHHHHHHHHHHHHHHHHHHH-HhccCC--CHHHHHHHHh----HHhcc
Confidence 47888888776654421111 0111223456788888998886543222 111111 1122222222 12243
Q ss_pred ccCcccchhhhHHHHHhh----cCCCceeeeeechhHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~----~~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
.|- --+++..... ++|.....|++..+.++++++.+=
T Consensus 80 fTT-----FSTf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG 120 (128)
T PRK14199 80 LTT-----FSTFSYETINLITNGNILLGIENIILNLGLSLLGVVIG 120 (128)
T ss_pred ccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 1123332222 456667789999999998887654
No 53
>PRK14202 camphor resistance protein CrcB; Provisional
Probab=20.95 E-value=3.6e+02 Score=20.17 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=54.3
Q ss_pred hhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhc
Q 026947 82 QVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAG 161 (230)
Q Consensus 82 Q~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~ 161 (230)
=.+|+.+|+.+-|.+-.- .+... + .-++.-++.-.+++|++-+..-... +.+.. ...+...+. .-++|
T Consensus 11 V~~Gg~~Ga~~Ry~l~~~-~~~~~---~-~fP~gTl~vNi~GsfllG~~~~~~~-~~~~~--~~~~~~~l~----tGf~G 78 (128)
T PRK14202 11 VGAGGFLGSVARYLVALA-LSFIG---T-GFPFATFTVNLLGSFLIGFISELAL-STTLV--SPEARLLLV----TGFCG 78 (128)
T ss_pred HHHHHHHHHHHHHHHHHH-HHhcc---C-CCcHHHHHHHHHHHHHHHHHHHHHH-hcCCC--CHHHHHHHH----hHHhc
Confidence 347888888765554321 11111 1 2234568888899998866543221 11111 111222222 22234
Q ss_pred CccCcccchhhhHHHHHh----hcCCCceeeeeechhHHHHHHHHHH
Q 026947 162 PITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 162 ~~tG~~lNPA~~~~~~~~----~~~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
..|- --+++.... .++|.....|.+..++++++++.+=
T Consensus 79 gfTT-----FSTf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG 120 (128)
T PRK14202 79 GFTT-----FSSYMYEIAALLRDGELFYASLYLAGSLVGGFVALYSG 120 (128)
T ss_pred cccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4331 113333332 2356667789999999999987654
No 54
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=20.75 E-value=3.6e+02 Score=20.04 Aligned_cols=106 Identities=10% Similarity=0.035 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhcC
Q 026947 83 VLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGP 162 (230)
Q Consensus 83 ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~~ 162 (230)
.+|+.+|+.+-|.+-. ..+. ..+..-++.-++.-.+++|++-+..-... ++... ...+...+.. -++|.
T Consensus 7 ~~GG~lGa~~Ry~l~~-~~~~---~~~~~fP~~Tl~vN~~GsfllG~l~~~~~-~~~~~--~~~~~~~l~t----GflGg 75 (124)
T PRK14198 7 FVGGGLGASLRHAVNM-ASAR---LLGTSFPYGTFIINVSGSLVMGLIAGYLA-FKGGA--PQHWRLFLMT----GILGG 75 (124)
T ss_pred HHHHHHHHHHHHHHHH-HHHH---hcCCCCcHHHHHHHHHHHHHHHHHHHHHH-hccCC--CHHHHHHHHH----HHhcc
Confidence 4788888876665432 1111 11112234568888899998876543221 11111 1122222222 22233
Q ss_pred ccCcccchhhhHHHHHh----hcCCCceeeeeechhHHHHHHHHHH
Q 026947 163 ITGASMNPARSLGPAIV----SSQYKGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~----~~~~~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
.|- --+++.... .++|.....|++..++++++++.+=
T Consensus 76 fTT-----FSTf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG 116 (124)
T PRK14198 76 YTT-----FSAFSLDAALLYERGALGLAALYVLGSVALGIAGLFAG 116 (124)
T ss_pred ccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 331 112333222 2356566789999999999988764
No 55
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=20.71 E-value=4.7e+02 Score=22.96 Aligned_cols=22 Identities=14% Similarity=0.463 Sum_probs=18.5
Q ss_pred eeechhHHHHHHHHHHHHHhcC
Q 026947 189 YIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 189 y~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.++.|++|.+++..+|+.+...
T Consensus 126 wv~sPlia~~~a~~l~~~~~~~ 147 (326)
T PF01384_consen 126 WVISPLIAFILAYILYRLIRRI 147 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999987543
No 56
>PRK14215 camphor resistance protein CrcB; Provisional
Probab=20.21 E-value=3.4e+02 Score=20.23 Aligned_cols=110 Identities=11% Similarity=0.032 Sum_probs=55.9
Q ss_pred hhhHHHHHHHHHHHHhhccccceeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHHHHHHHHHhhc
Q 026947 82 QVLGSTLAAGTLRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAG 161 (230)
Q Consensus 82 Q~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~~v~~~~~~~~ 161 (230)
=.+|+.+|+.+-|.+-. ..+.. .+..-++.-++.-.+++|++-+..-....+.+.+ ..+...+. .-++|
T Consensus 7 V~~Gg~~Ga~~Ry~l~~-~~~~~---~~~~fP~gTl~vN~~GsfllG~~~~~~~~~~~~~---~~~~~~l~----tGf~G 75 (126)
T PRK14215 7 IAVGAAIGANLRYGIGL-WAAQR---WGTSWPYGTFIINLLGCLLIGLLLTLATTRLTLS---EPARLMLV----TGLLG 75 (126)
T ss_pred HHHHHHHHHHHHHHHHH-Hhhhc---ccCCCchHHHHHHHHHHHHHHHHHHHHHhccCCC---HHHHHHHH----hHHhc
Confidence 34788888876655432 11111 1112234568888899999876643321111111 12222222 22234
Q ss_pred CccCcccchhhhHHHHHhh----cCCCceeeeeechhHHHHHHHHHHHHH
Q 026947 162 PITGASMNPARSLGPAIVS----SQYKGLWIYIVAPPLGATAGAWVYNMV 207 (230)
Q Consensus 162 ~~tG~~lNPA~~~~~~~~~----~~~~~~~vy~v~p~~Ga~~a~~l~~~~ 207 (230)
..|- --+++..... ++|.....|....+.++++++.+=..+
T Consensus 76 gfTT-----FSTf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (126)
T PRK14215 76 GFTT-----FSTFGYESYSLLSSGNWLAAGGYVVGSVGGGLIAVIIGAGL 120 (126)
T ss_pred cccc-----HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4331 1133333322 355566789999999999988765433
No 57
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=20.08 E-value=31 Score=30.55 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=17.4
Q ss_pred hcCccCcccchhhhHHHHHhh
Q 026947 160 AGPITGASMNPARSLGPAIVS 180 (230)
Q Consensus 160 ~~~~tG~~lNPA~~~~~~~~~ 180 (230)
+++=||+|+.||.+++..+-.
T Consensus 7 ~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 7 TGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EcCCcHHHHHHHHHHHHHHHh
Confidence 345599999999999998864
Done!