Query 026947
Match_columns 230
No_of_seqs 197 out of 1452
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 03:48:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyz_A Aquaporin-4; water tran 100.0 4.5E-52 1.5E-56 358.9 17.1 212 1-212 56-273 (340)
2 2w2e_A AQY1, aquaporin, aquapo 100.0 5.7E-52 1.9E-56 353.0 16.4 217 1-219 49-275 (279)
3 3gd8_A Aquaporin-4; proton exc 100.0 4.5E-52 1.5E-56 343.9 14.4 209 1-209 8-222 (223)
4 2zz9_A Aquaporin-4; water tran 100.0 1.9E-51 6.4E-56 352.2 17.6 210 1-210 17-232 (301)
5 2o9g_A Aquaporin Z; integral m 100.0 1.9E-51 6.4E-56 342.6 14.8 209 1-210 9-232 (234)
6 1ldf_A Glycerol uptake facilit 100.0 2.2E-51 7.7E-56 350.6 15.4 213 1-213 12-260 (281)
7 1j4n_A Aquaporin 1; membrane p 100.0 1.7E-51 5.9E-56 349.3 14.5 212 1-212 15-237 (271)
8 3llq_A Aquaporin Z 2; aquapori 100.0 3.5E-51 1.2E-55 343.4 14.9 207 1-208 34-253 (256)
9 2b6o_A Aquaporin-0, lens fiber 100.0 1.8E-50 6.3E-55 341.6 18.2 209 1-211 14-226 (263)
10 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 5.6E-51 1.9E-55 344.9 14.6 209 1-211 16-229 (266)
11 3cn5_A Aquaporin; membrane pro 100.0 1.3E-50 4.6E-55 347.6 11.5 210 1-210 65-289 (304)
12 2f2b_A Aquaporin AQPM; protein 100.0 1.3E-49 4.4E-54 334.1 16.0 209 1-209 9-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 9.6E-51 3.3E-55 342.8 9.1 213 1-213 14-247 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 1E-15 3.4E-20 129.1 6.5 100 112-211 8-111 (263)
15 3llq_A Aquaporin Z 2; aquapori 99.5 8E-15 2.8E-19 122.7 6.4 100 110-209 26-132 (256)
16 2zz9_A Aquaporin-4; water tran 99.5 2.6E-14 8.8E-19 122.2 7.6 100 112-211 11-118 (301)
17 2f2b_A Aquaporin AQPM; protein 99.5 4.1E-14 1.4E-18 118.3 8.6 93 1-98 148-245 (246)
18 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 1.2E-14 4.1E-19 122.6 4.7 98 112-209 10-111 (266)
19 2o9g_A Aquaporin Z; integral m 99.5 2E-14 6.7E-19 119.3 5.3 98 113-210 4-108 (234)
20 1j4n_A Aquaporin 1; membrane p 99.5 2.5E-14 8.4E-19 121.1 4.4 99 112-210 9-120 (271)
21 3gd8_A Aquaporin-4; proton exc 99.5 2.7E-14 9.2E-19 117.6 4.3 98 113-210 3-108 (223)
22 3c02_A Aquaglyceroporin; membr 99.5 2.2E-14 7.4E-19 120.7 3.7 99 112-210 8-112 (258)
23 3iyz_A Aquaporin-4; water tran 99.5 2.6E-14 8.9E-19 123.4 4.1 99 112-210 50-156 (340)
24 1ldf_A Glycerol uptake facilit 99.5 5.9E-14 2E-18 119.4 6.0 100 112-211 6-111 (281)
25 2w2e_A AQY1, aquaporin, aquapo 99.4 7.1E-14 2.4E-18 118.5 5.3 100 112-211 43-155 (279)
26 3cn5_A Aquaporin; membrane pro 99.4 5.5E-14 1.9E-18 120.4 4.2 99 112-210 59-166 (304)
27 3kcu_A Probable formate transp 67.6 52 0.0018 27.2 10.6 99 32-134 70-182 (285)
28 3tds_E Formate/nitrite transpo 56.7 5.9 0.0002 32.8 2.5 101 31-134 65-177 (268)
29 4fc4_A Nitrite transporter NIR 55.3 5.4 0.00019 32.8 2.1 100 32-134 60-171 (261)
30 3s2u_A UDP-N-acetylglucosamine 52.3 3.5 0.00012 35.1 0.5 21 49-69 9-29 (365)
31 3kly_A Putative formate transp 29.7 27 0.00093 28.9 2.4 99 32-134 69-181 (280)
32 3s2u_A UDP-N-acetylglucosamine 21.9 13 0.00044 31.5 -1.1 20 163-182 11-30 (365)
No 1
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-52 Score=358.88 Aligned_cols=212 Identities=33% Similarity=0.505 Sum_probs=182.4
Q ss_pred ChHHHHHHHHHHHHhhhhhcccc--CCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccch
Q 026947 1 MAEILGTYFMIFAGCASVVVNLN--NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPY 78 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~y 78 (230)
++||+||++|+|+||++++.... +....+++.++++||+++++.+++++++||||+|||||+++++.|+++|.+++.|
T Consensus 56 lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~Y 135 (340)
T 3iyz_A 56 TAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFY 135 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHH
Confidence 48999999999999998764321 2223467889999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHhhccccceee---cCCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHHHHHHH
Q 026947 79 ILCQVLGSTLAAGTLRLLFQEKQDQFAG---TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVL 154 (230)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~ig~~v~ 154 (230)
|++|++||++|+.+++.++++......+ +.+..+..++++.|+++||+|+++++.+.++++. .....|+.||+++.
T Consensus 136 iiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v~ 215 (340)
T 3iyz_A 136 ITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVA 215 (340)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHHH
Confidence 9999999999999999988754322111 2344588899999999999999999997544443 23568999999998
Q ss_pred HHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCC
Q 026947 155 LNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 212 (230)
Q Consensus 155 ~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~ 212 (230)
+.+..++++||++|||||+|||+++.++|.++|+||++|++|+++|+++|++++.++.
T Consensus 216 i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 216 IGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred HHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 8888888999999999999999999999999999999999999999999999876543
No 2
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=5.7e-52 Score=352.97 Aligned_cols=217 Identities=24% Similarity=0.350 Sum_probs=184.9
Q ss_pred ChHHHHHHHHHHHHhhhhhc-ccc------CCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCC
Q 026947 1 MAEILGTYFMIFAGCASVVV-NLN------NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 73 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~-~~~------~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 73 (230)
++||+||++|+|+++++... +.. .+...+++.++++||+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 49 laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 128 (279)
T 2w2e_A 49 SGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPPF 128 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCCCCHH
Confidence 47999999999999886421 211 11223567799999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhccccceeecCC--CCChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHHHH
Q 026947 74 QVPPYILCQVLGSTLAAGTLRLLFQEKQDQFAGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGS 151 (230)
Q Consensus 74 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~ig~ 151 (230)
+++.|+++|++||++|+.+++.++++... ..+.| ..+..++++.|+++|++|+++++.+.+++++.+.+.|+.||+
T Consensus 129 ~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~--~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~~pl~IGl 206 (279)
T 2w2e_A 129 RGILMAFTQIVAGMAAAGAASAMTPGEIA--FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAPFVIGI 206 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSSCC--CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccce--eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCcHHHHHHH
Confidence 99999999999999999999999875432 23444 347889999999999999999998766665555689999999
Q ss_pred HHHHHHHhhcCccCcccchhhhHHHHHhhcCC-CceeeeeechhHHHHHHHHHHHHHhcCCCCcccccc
Q 026947 152 TVLLNVMFAGPITGASMNPARSLGPAIVSSQY-KGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITK 219 (230)
Q Consensus 152 ~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~-~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~~~ 219 (230)
.+.+.+++.++.||++|||||||||+++.+.| .++|+||++|++|+++|+++|+++...+.++..+.+
T Consensus 207 ~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p~~ 275 (279)
T 2w2e_A 207 ALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNPGQ 275 (279)
T ss_dssp HHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC--
T ss_pred HHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCCCC
Confidence 99999999999999999999999999999765 579999999999999999999999877666544443
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-52 Score=343.88 Aligned_cols=209 Identities=32% Similarity=0.488 Sum_probs=180.7
Q ss_pred ChHHHHHHHHHHHHhhhhhccc--cCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccch
Q 026947 1 MAEILGTYFMIFAGCASVVVNL--NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPY 78 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~y 78 (230)
++||+||++|+++++++++... .+....++..++++||+++++.+++++++||+|+|||||+++++.|+++|++.+.|
T Consensus 8 ~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 87 (223)
T 3gd8_A 8 TAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFY 87 (223)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHHHHHH
Confidence 4899999999999999876432 22233467889999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHhhccccc---eeecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHHHHHHH
Q 026947 79 ILCQVLGSTLAAGTLRLLFQEKQDQ---FAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVL 154 (230)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~ig~~v~ 154 (230)
+++|++|+++|+.+++.+++++... ...+.|+.+..++++.|+++|++|+++++.+.++++. .....|+.+|+.+.
T Consensus 88 i~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v~ 167 (223)
T 3gd8_A 88 IAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVA 167 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHHH
Confidence 9999999999999999988653221 2223455588899999999999999999987544443 23568999999998
Q ss_pred HHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 155 LNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 155 ~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
+.+...++.||.+|||||||||+++.++|+++|+||++|++|+++++++|++++.
T Consensus 168 ~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 168 IGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 8888888899999999999999999999999999999999999999999998764
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.9e-51 Score=352.16 Aligned_cols=210 Identities=33% Similarity=0.505 Sum_probs=180.4
Q ss_pred ChHHHHHHHHHHHHhhhhhccccC--CCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccch
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNN--EKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPY 78 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~y 78 (230)
++||+||++|+++++++.+..... ....+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|
T Consensus 17 lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 96 (301)
T 2zz9_A 17 TAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFY 96 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHHHHHHH
Confidence 489999999999999987643221 223467789999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHhhccccceee-c--CCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHHHHHHH
Q 026947 79 ILCQVLGSTLAAGTLRLLFQEKQDQFAG-T--LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVL 154 (230)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~~~~~-~--~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~ig~~v~ 154 (230)
+++|++||++|+++++.++++......+ + .+..+..++++.|+++||+|+++++.+.++++. ...+.|+.+|+.+.
T Consensus 97 iiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v~ 176 (301)
T 2zz9_A 97 ITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVA 176 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHHH
Confidence 9999999999999999998753321111 2 234478899999999999999999987544443 24578999999998
Q ss_pred HHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 155 LNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 155 ~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
+.+...+++||+++||||+|||+++.++|.++|+||++|++|+++|+++|++++.+
T Consensus 177 i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~ 232 (301)
T 2zz9_A 177 IGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 232 (301)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCC
Confidence 88888889999999999999999999999999999999999999999999998754
No 5
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1.9e-51 Score=342.59 Aligned_cols=209 Identities=34% Similarity=0.611 Sum_probs=181.8
Q ss_pred ChHHHHHHHHHHHHhhhhhcccc-CCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLN-NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYI 79 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi 79 (230)
++||+||++|++++|++...+.. ++...+++.++++||+++++.+++++++||+|+|||||+++++.|+++|++++.|+
T Consensus 9 ~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 88 (234)
T 2o9g_A 9 AAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYV 88 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHHH
Confidence 48999999999999998755432 22334677899999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcccc-----------ceeecCCCC-ChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhH
Q 026947 80 LCQVLGSTLAAGTLRLLFQEKQD-----------QFAGTLPAG-SNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGL 147 (230)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~-----------~~~~~~~~~-s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l 147 (230)
++|++|+++|+.+++.++++..+ ....+.|.. +..++++.|+++|++|+++++.+. |++..+.+.|+
T Consensus 89 ~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~-d~~~~~~~~pl 167 (234)
T 2o9g_A 89 IAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT-DKFAPAGFAPI 167 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT-STTSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc-CCCCccchHHH
Confidence 99999999999999999864321 122345543 788999999999999999999874 55555568999
Q ss_pred HHHHHHHHHHHhhcCccCcccchhhhHHHHHhhcC--CCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 148 AVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQ--YKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 148 ~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~--~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.+|+.+...++..++.||.++||||||||+++.++ |+++|+||++|++|+++++++|++++.+
T Consensus 168 ~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 168 AIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999875 4599999999999999999999998743
No 6
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=2.2e-51 Score=350.63 Aligned_cols=213 Identities=33% Similarity=0.465 Sum_probs=179.1
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+++++++++....++...+...++++||+++++.+++++++||||+|||||+++++.|+++|++++.|++
T Consensus 12 laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~ 91 (281)
T 1ldf_A 12 IAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIV 91 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHHH
Confidence 47999999999999987654332222334456899999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcccc-------------------ceeecCCC--CChhHHHHHHHHHHHHHHHhhheeeecCC
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQD-------------------QFAGTLPA--GSNIQAFVMEFIITFYLMFVISGVATDNR 139 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~-------------------~~~~~~~~--~s~~~~~~~E~~~T~~l~~~~~~~~~~~~ 139 (230)
+|++||++|+.+++.++++..+ ..+++.|. .+..++++.|+++|++|+++++.+.++++
T Consensus 92 AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~ 171 (281)
T 1ldf_A 92 SQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGN 171 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999998864211 12335554 47889999999999999999999754443
Q ss_pred Cc--CcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-------CC------CceeeeeechhHHHHHHHHHH
Q 026947 140 AI--GELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-------QY------KGLWIYIVAPPLGATAGAWVY 204 (230)
Q Consensus 140 ~~--~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-------~~------~~~~vy~v~p~~Ga~~a~~l~ 204 (230)
.. +.+.|+.||+.+...++..++.||.+|||||||||+++.. .| .++||||++|++|+++|+++|
T Consensus 172 ~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y 251 (281)
T 1ldf_A 172 GVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAY 251 (281)
T ss_dssp SSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHH
Confidence 22 4588999999999999999999999999999999999861 12 279999999999999999999
Q ss_pred HHHhcCCCC
Q 026947 205 NMVRYTDKP 213 (230)
Q Consensus 205 ~~~~~~~~~ 213 (230)
+++..++.+
T Consensus 252 ~~l~~~~~~ 260 (281)
T 1ldf_A 252 RKLIGRHLP 260 (281)
T ss_dssp HHHTGGGC-
T ss_pred HHHhCccCC
Confidence 999866554
No 7
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.7e-51 Score=349.32 Aligned_cols=212 Identities=27% Similarity=0.450 Sum_probs=181.3
Q ss_pred ChHHHHHHHHHHHHhhhhhccc-------cCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCC
Q 026947 1 MAEILGTYFMIFAGCASVVVNL-------NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWK 73 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~ 73 (230)
++||+||++|+|++|++.+... ..+...+++.++++||+++++.+++++++||||+|||||+++++.|+++|+
T Consensus 15 ~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 94 (271)
T 1j4n_A 15 VAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVL 94 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcCCCCHH
Confidence 4899999999999999865321 111223577899999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhHHHHHHHHHHHHhhccccce---eecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHH
Q 026947 74 QVPPYILCQVLGSTLAAGTLRLLFQEKQDQF---AGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAV 149 (230)
Q Consensus 74 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~i 149 (230)
+++.|+++|++||++|+.+++.++++.+... ..+.|..+..++++.|+++|++|+++++.+.++++. ...+.|+.|
T Consensus 95 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~I 174 (271)
T 1j4n_A 95 RAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAI 174 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCCCccccHHHHH
Confidence 9999999999999999999999986443322 223455577889999999999999999987443332 245889999
Q ss_pred HHHHHHHHHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCCC
Q 026947 150 GSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 212 (230)
Q Consensus 150 g~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~ 212 (230)
|+.+.+.+...++.||+++||||||||+++.++|+++|+||++|++|+++|+++|++++.++.
T Consensus 175 Gl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 175 GFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998888888899999999999999999999999999999999999999999999876544
No 8
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=3.5e-51 Score=343.41 Aligned_cols=207 Identities=33% Similarity=0.662 Sum_probs=179.9
Q ss_pred ChHHHHHHHHHHHHhhhhhcccc-CCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLN-NEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYI 79 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi 79 (230)
++||+||++|+++||+++..+.. ++...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|+
T Consensus 34 laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 113 (256)
T 3llq_A 34 LAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYV 113 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHHHHHHH
Confidence 48999999999999998754332 33345678899999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhcccc---------ceeecCCC-CChhHHHHHHHHHHHHHHHhhheeeecCCCcCcchhHHH
Q 026947 80 LCQVLGSTLAAGTLRLLFQEKQD---------QFAGTLPA-GSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAV 149 (230)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~---------~~~~~~~~-~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~~~~~~l~i 149 (230)
++|++||++|+.+++.++++... ...++.|. .+..++++.|+++|++|+++++.+ .|+++.+.+.|+.+
T Consensus 114 iAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~~~~~pl~I 192 (256)
T 3llq_A 114 IAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-THGRVPAGFAPIAI 192 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccchhHHH
Confidence 99999999999999998853211 12234554 378899999999999999999986 45555556899999
Q ss_pred HHHHHHHHHhhcCccCcccchhhhHHHHHhhcC--CCceeeeeechhHHHHHHHHHHHHHh
Q 026947 150 GSTVLLNVMFAGPITGASMNPARSLGPAIVSSQ--YKGLWIYIVAPPLGATAGAWVYNMVR 208 (230)
Q Consensus 150 g~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~~--~~~~~vy~v~p~~Ga~~a~~l~~~~~ 208 (230)
|+++.+..++.++.||++|||||||||+++.++ |+++|+||++|++|+++|+++|+++.
T Consensus 193 Gl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 193 GLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999864 56899999999999999999999885
No 9
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=1.8e-50 Score=341.64 Aligned_cols=209 Identities=30% Similarity=0.476 Sum_probs=182.2
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+++++++.... ++...+++.++++||+++++.+++++++||+|+|||||+++++.|+++|.+.+.|++
T Consensus 14 laEfiGT~~Lv~~g~g~~~~~--~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~ 91 (263)
T 2b6o_A 14 FAEFFATLFYVFFGLGASLRW--APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVV 91 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHSCC--CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHH
Confidence 479999999999999987532 222345677899999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccce---eecCCCCChhHHHHHHHHHHHHHHHhhheeeecCC-CcCcchhHHHHHHHHHH
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQF---AGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNR-AIGELAGLAVGSTVLLN 156 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~-~~~~~~~l~ig~~v~~~ 156 (230)
+|++||++|+.+++.+++++.... ..+.|+.+..++++.|+++|++|+++++.+.++++ ....+.|+.||+.+.+.
T Consensus 92 AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 171 (263)
T 2b6o_A 92 AQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLG 171 (263)
T ss_dssp HHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHH
Confidence 999999999999999987543222 22335568899999999999999999998743333 23457899999999999
Q ss_pred HHhhcCccCcccchhhhHHHHHhhcCCCceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 157 VMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 157 ~~~~~~~tG~~lNPA~~~~~~~~~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
++..+++||++|||||||||+++.++|+++|+||++|++|+++|+++|++++.++
T Consensus 172 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 172 HLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999999999999987654
No 10
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-51 Score=344.94 Aligned_cols=209 Identities=29% Similarity=0.450 Sum_probs=181.1
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|+++++..... +...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|++
T Consensus 16 laEfiGT~~lv~~g~g~~~~~~--~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~ 93 (266)
T 3d9s_A 16 FAEFLATLIFVFFGLGSALKWP--SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVA 93 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCS--SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCC--CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4799999999999999875322 22346788999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccceee-c--CCCCChhHHHHHHHHHHHHHHHhhheeeecCCC-cCcchhHHHHHHHHHH
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQFAG-T--LPAGSNIQAFVMEFIITFYLMFVISGVATDNRA-IGELAGLAVGSTVLLN 156 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~-~--~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~~~~l~ig~~v~~~ 156 (230)
+|++||++|+.+++.+++++.....+ + .+..+..++++.|+++|++|+++++.+.++++. ...+.|+.+|+.+.+.
T Consensus 94 AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 173 (266)
T 3d9s_A 94 AQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLG 173 (266)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHH
Confidence 99999999999999998653221112 2 234478899999999999999999987533332 2457899999999999
Q ss_pred HHhhcCccCcccchhhhHHHHHhhcCCCc-eeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 157 VMFAGPITGASMNPARSLGPAIVSSQYKG-LWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 157 ~~~~~~~tG~~lNPA~~~~~~~~~~~~~~-~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
++..+++||+++||||||||+++.++|++ +|+||++|++|+++|+++|++++.++
T Consensus 174 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 174 HLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998 99999999999999999999987643
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.3e-50 Score=347.57 Aligned_cols=210 Identities=29% Similarity=0.461 Sum_probs=179.6
Q ss_pred ChHHHHHHHHHHHHhhhhhccc---cCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccc
Q 026947 1 MAEILGTYFMIFAGCASVVVNL---NNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPP 77 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~ 77 (230)
++||+||++|+|+++++++... ++....+++.++++||+++++++++++++||||+|||||+++++.|+++|++++.
T Consensus 65 lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~ 144 (304)
T 3cn5_A 65 IAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALV 144 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHH
Confidence 4899999999999998875432 1223356778999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHhhccccce----eecCCCCChhHHHHHHHHHHHHHHHhhheeeecCCCc-Cc----chhHH
Q 026947 78 YILCQVLGSTLAAGTLRLLFQEKQDQF----AGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAI-GE----LAGLA 148 (230)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~~~-~~----~~~l~ 148 (230)
|+++|++||++|+.+++.++++..+.. ....+..+..++++.|+++||+|+++++...++++.. +. +.|+.
T Consensus 145 YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~ 224 (304)
T 3cn5_A 145 YMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLP 224 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHH
Confidence 999999999999999999987532111 1122345788999999999999999999764333322 22 78999
Q ss_pred HHHHHHHHHHhhcCccCcccchhhhHHHHHh---hcCCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 149 VGSTVLLNVMFAGPITGASMNPARSLGPAIV---SSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 149 ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~---~~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
||+++.+.+++.+++||+++||||||||+++ .++|+++|+||++|++|+++|+++|++++.+
T Consensus 225 IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 225 IGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999 5689999999999999999999999998754
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.3e-49 Score=334.05 Aligned_cols=209 Identities=34% Similarity=0.575 Sum_probs=179.5
Q ss_pred ChHHHHHHHHHHHHhhhhhccc--cC----------C-----CccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHH
Q 026947 1 MAEILGTYFMIFAGCASVVVNL--NN----------E-----KIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIA 63 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~--~~----------~-----~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla 63 (230)
++||+||++|+|+++++.+... .+ + +..+++.++++||+++++.+++++++||+|+|||||++
T Consensus 9 ~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NPAVTla 88 (246)
T 2f2b_A 9 IAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIG 88 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeCHHHHHH
Confidence 4899999999999998765432 11 1 11234558999999999999999999999999999999
Q ss_pred HHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc---cceeecCC--CCChhHHHHHHHHHHHHHHHhhheeeecC
Q 026947 64 HATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ---DQFAGTLP--AGSNIQAFVMEFIITFYLMFVISGVATDN 138 (230)
Q Consensus 64 ~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~~--~~s~~~~~~~E~~~T~~l~~~~~~~~~~~ 138 (230)
+++.|+++|++++.|+++|++|+++|+.+++.+++++. .....+.| ..+..++++.|+++|++|+++++.+.+|+
T Consensus 89 ~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~ 168 (246)
T 2f2b_A 89 LWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDE 168 (246)
T ss_dssp HHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecCC
Confidence 99999999999999999999999999999999997532 23344555 44888999999999999999999876666
Q ss_pred CCcCcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHH--hh----cCCCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 139 RAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAI--VS----SQYKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 139 ~~~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~--~~----~~~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
+......|+.+|+.+...+++.++.||+++||||||||++ .. .+|++.|+||++|++|+++|+++|+++..
T Consensus 169 ~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 169 RAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp TSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 6556688999999999999999999999999999999999 33 36788889999999999999999998864
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=9.6e-51 Score=342.83 Aligned_cols=213 Identities=27% Similarity=0.396 Sum_probs=177.7
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHHhcCCCCCcccchhh
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHATCKRFPWKQVPPYIL 80 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~ 80 (230)
++||+||++|+|++|++.+.....+...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++++.|++
T Consensus 14 ~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~ 93 (258)
T 3c02_A 14 IGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYFF 93 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHHH
Confidence 47999999999999987654332222346788999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccce--------eecCCCCChhHHHHHHHHHHHHHHHhhheeeecCC--CcCcch-hHHH
Q 026947 81 CQVLGSTLAAGTLRLLFQEKQDQF--------AGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNR--AIGELA-GLAV 149 (230)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~--------~~~~~~~s~~~~~~~E~~~T~~l~~~~~~~~~~~~--~~~~~~-~l~i 149 (230)
+|++||++|+.+++.++++..+.. .+.....+..++++.|+++|++|+++++.+.++++ ..+.+. |+.+
T Consensus 94 AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~I 173 (258)
T 3c02_A 94 AQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVV 173 (258)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHH
Confidence 999999999999999986432111 01111224556999999999999999998753332 234577 9999
Q ss_pred HHHHHHHHHhhcCccCcccchhhhHHHHHhhc------CC----CceeeeeechhHHHHHHHHHHHHHhcCCCC
Q 026947 150 GSTVLLNVMFAGPITGASMNPARSLGPAIVSS------QY----KGLWIYIVAPPLGATAGAWVYNMVRYTDKP 213 (230)
Q Consensus 150 g~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~------~~----~~~~vy~v~p~~Ga~~a~~l~~~~~~~~~~ 213 (230)
|+.+...++..++.||+++||||||||+++.+ +| +++|+||++|++|+++|+++|+++..++.+
T Consensus 174 Gl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~~ 247 (258)
T 3c02_A 174 GLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLVD 247 (258)
T ss_dssp HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999999872 34 569999999999999999999998865544
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.59 E-value=1e-15 Score=129.07 Aligned_cols=100 Identities=30% Similarity=0.301 Sum_probs=85.5
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCCC-cCc--chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCcee
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNRA-IGE--LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGLW 187 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-~~~--~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~~~ 187 (230)
+..+.++.|+++|++|+++.+.+....+. ... ..++.+|+++.+.+++.+++||+|+|||++++.++.++ +|.+.|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 45788999999999999999886543221 111 25788999999999999999999999999999999876 788999
Q ss_pred eeeechhHHHHHHHHHHHHHhcCC
Q 026947 188 IYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 188 vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
+||++|++|+++|+.+++.+++++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999998653
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=8e-15 Score=122.74 Aligned_cols=100 Identities=30% Similarity=0.350 Sum_probs=82.8
Q ss_pred CCChhHHHHHHHHHHHHHHHhhheeee-cCC---C-cCc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-C
Q 026947 110 AGSNIQAFVMEFIITFYLMFVISGVAT-DNR---A-IGE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-Q 182 (230)
Q Consensus 110 ~~s~~~~~~~E~~~T~~l~~~~~~~~~-~~~---~-~~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~ 182 (230)
..+..|.++.|+++|++|++..+++.. ... . .+. ...+.+|+++++.+++.+++||+|+|||++++.++.++ +
T Consensus 26 ~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~ 105 (256)
T 3llq_A 26 SYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFP 105 (256)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCC
Confidence 346789999999999999999887542 111 1 111 24688999999999999999999999999999999887 7
Q ss_pred CCceeeeeechhHHHHHHHHHHHHHhc
Q 026947 183 YKGLWIYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 183 ~~~~~vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
|.+.+.|+++|++|+++|+.+.+.+++
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999988874
No 16
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.50 E-value=2.6e-14 Score=122.22 Aligned_cols=100 Identities=23% Similarity=0.295 Sum_probs=84.6
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCCC-----c-C-cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CC
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNRA-----I-G-ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QY 183 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~-----~-~-~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~ 183 (230)
+.++.++.|+++|++|+++.++....... . + ....+.+|+++++.+++.+++||+|+|||++++.++.++ +|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 56789999999999999998875432111 1 1 135688999999999999999999999999999999887 79
Q ss_pred CceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 184 KGLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 184 ~~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
.+...|+++|++|+++|+.+.+.+++++
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999887643
No 17
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.50 E-value=4.1e-14 Score=118.25 Aligned_cols=93 Identities=27% Similarity=0.411 Sum_probs=76.0
Q ss_pred ChHHHHHHHHHHHHhhhhhccccCCCccChhHHHHHHHHHHHHHHHHHccCCcccccHHHHHHHHH-----hcCCCCCcc
Q 026947 1 MAEILGTYFMIFAGCASVVVNLNNEKIVSLPGISIVWGLVVMVLVYSLGHISGAHFNPSVTIAHAT-----CKRFPWKQV 75 (230)
Q Consensus 1 laEf~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~g~~~~~~~ 75 (230)
+.|+++|++|++..++.....+. . ....++.+|+.+....+..+++||+|+|||++++..+ .++..|.+.
T Consensus 148 ~~E~i~Tf~Lv~~i~~~~~~~~~-~----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~ 222 (246)
T 2f2b_A 148 LAEVVGTFLLMITIMGIAVDERA-P----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYY 222 (246)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTS-C----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGT
T ss_pred HHHHHHHHHHHheeeEEecCCCC-C----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceE
Confidence 37999999999988765332111 1 1235888999999999999999999999999999888 346678889
Q ss_pred cchhhhhhhHHHHHHHHHHHHhh
Q 026947 76 PPYILCQVLGSTLAAGTLRLLFQ 98 (230)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~ 98 (230)
++||++|++|+++|+++.+.+.+
T Consensus 223 ~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 223 SIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeHHHHHHHHHHHHHHHHcC
Confidence 99999999999999988877653
No 18
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=122.57 Aligned_cols=98 Identities=26% Similarity=0.313 Sum_probs=83.9
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecCCC--cCc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCcee
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDNRA--IGE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKGLW 187 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~~~--~~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~~~ 187 (230)
+..+.++.|+++|++|++..++....... .+. ...+.+|+++++.+++.+++||+|+|||++++.++.++ +|.+.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 45789999999999999998876533221 111 25689999999999999999999999999999999887 788999
Q ss_pred eeeechhHHHHHHHHHHHHHhc
Q 026947 188 IYIVAPPLGATAGAWVYNMVRY 209 (230)
Q Consensus 188 vy~v~p~~Ga~~a~~l~~~~~~ 209 (230)
.|+++|++|+++|+.+.+.+++
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~ 111 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAP 111 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999998874
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.48 E-value=2e-14 Score=119.29 Aligned_cols=98 Identities=28% Similarity=0.285 Sum_probs=82.8
Q ss_pred hhHHHHHHHHHHHHHHHhhheeeecCC-C---c-Cc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 113 NIQAFVMEFIITFYLMFVISGVATDNR-A---I-GE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~~~-~---~-~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
..|.++.|+++|++|++..++...-++ . . +. ...+.+|+++++.+++.+++||+|+|||++++.++.++ +|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 568999999999999999876532211 1 1 11 24688999999999999999999999999999999887 7889
Q ss_pred eeeeeechhHHHHHHHHHHHHHhcC
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
...|+++|++|+++|+.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999988864
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.46 E-value=2.5e-14 Score=121.06 Aligned_cols=99 Identities=26% Similarity=0.374 Sum_probs=82.6
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeec-------CCCcC-----cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHh
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATD-------NRAIG-----ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIV 179 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~-------~~~~~-----~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~ 179 (230)
+.+|.++.|+++|++|++..++.... ++..+ ....+.+|+++++.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 45689999999999999988764321 11111 1346899999999999999999999999999999998
Q ss_pred hc-CCCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 180 SS-QYKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 180 ~~-~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
++ +|.+...|+++|++|+++|+.+.+.++.+
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 87 78899999999999999999999888753
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.46 E-value=2.7e-14 Score=117.62 Aligned_cols=98 Identities=23% Similarity=0.297 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHHHHHHHhhheeeec--CCCc---C--cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCC
Q 026947 113 NIQAFVMEFIITFYLMFVISGVATD--NRAI---G--ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYK 184 (230)
Q Consensus 113 ~~~~~~~E~~~T~~l~~~~~~~~~~--~~~~---~--~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~ 184 (230)
.+|.++.|+++|++|++..++.... ++.+ . ....+.+|+++.+.+++.+++||+|+|||++++..+.++ +|+
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 82 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHH
Confidence 4689999999999999988875432 1111 1 134688999999999999999999999999999999887 788
Q ss_pred ceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 185 GLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 185 ~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
+...|+++|++|+++++.+.+.++++
T Consensus 83 ~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 83 KSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998887653
No 22
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.46 E-value=2.2e-14 Score=120.67 Aligned_cols=99 Identities=26% Similarity=0.365 Sum_probs=83.1
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeec----CCCcCc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATD----NRAIGE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~----~~~~~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
+..|.++.|+++|++|++..+++... +...+. ...+.+|+++.+.+++.+++||+|+|||++++.++.++ +|++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56789999999999999987764321 111111 24688899999999999999999999999999999987 7999
Q ss_pred eeeeeechhHHHHHHHHHHHHHhcC
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
...|+++|++|+++|+.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcch
Confidence 9999999999999999999888764
No 23
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.45 E-value=2.6e-14 Score=123.44 Aligned_cols=99 Identities=23% Similarity=0.317 Sum_probs=82.7
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeecC--CC----cC-cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CC
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATDN--RA----IG-ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QY 183 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~~--~~----~~-~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~ 183 (230)
+.+|.++.|+++|++|+++.+++.... .. .+ ....+.+|+++++.+++.+++||+|+|||++++.++.++ .|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 357889999999999999987754321 11 11 135688999999999999999999999999999999887 68
Q ss_pred CceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 184 KGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 184 ~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
.+...|+++|++|+++|+.+.+.+++.
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 899999999999999999998887754
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.45 E-value=5.9e-14 Score=119.39 Aligned_cols=100 Identities=19% Similarity=0.220 Sum_probs=83.9
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeee----cCCC-cCcchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-CCCc
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVAT----DNRA-IGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-QYKG 185 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~----~~~~-~~~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~~~~ 185 (230)
+..+.++.|+++|++|++..+++.. .+.. ......+.+|+++.+.+++.+++||+|+|||++++.++.++ +|.+
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 5678999999999999998775432 1111 11235788999999999999999999999999999999887 7999
Q ss_pred eeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 186 LWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 186 ~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
...|+++|++|+++|+.+.+.+++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999998887543
No 25
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.43 E-value=7.1e-14 Score=118.55 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=82.3
Q ss_pred ChhHHHHHHHHHHHHHHHhhheee---ecCC----CcC-----cchhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHh
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVA---TDNR----AIG-----ELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIV 179 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~---~~~~----~~~-----~~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~ 179 (230)
+..+.++.|+++|++|++..++.+ .... ... ....+.+|+++++.+++.+++||+|+|||++++.++.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 556789999999999998876542 1110 111 1246889999999999999999999999999999998
Q ss_pred hc-CCCceeeeeechhHHHHHHHHHHHHHhcCC
Q 026947 180 SS-QYKGLWIYIVAPPLGATAGAWVYNMVRYTD 211 (230)
Q Consensus 180 ~~-~~~~~~vy~v~p~~Ga~~a~~l~~~~~~~~ 211 (230)
++ +|.+...|+++|++|+++|+.+.+.+++.+
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 87 788999999999999999999999887543
No 26
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.43 E-value=5.5e-14 Score=120.41 Aligned_cols=99 Identities=22% Similarity=0.346 Sum_probs=82.8
Q ss_pred ChhHHHHHHHHHHHHHHHhhheeeec---CC---Cc-Cc-chhHHHHHHHHHHHHhhcCccCcccchhhhHHHHHhhc-C
Q 026947 112 SNIQAFVMEFIITFYLMFVISGVATD---NR---AI-GE-LAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSS-Q 182 (230)
Q Consensus 112 s~~~~~~~E~~~T~~l~~~~~~~~~~---~~---~~-~~-~~~l~ig~~v~~~~~~~~~~tG~~lNPA~~~~~~~~~~-~ 182 (230)
+..|.++.|+++|++|++..++.... .+ .. +. ...+.+|+++++.+++.+++||+|+|||++++.++.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999998765321 11 11 11 24688999999999999999999999999999999887 7
Q ss_pred CCceeeeeechhHHHHHHHHHHHHHhcC
Q 026947 183 YKGLWIYIVAPPLGATAGAWVYNMVRYT 210 (230)
Q Consensus 183 ~~~~~vy~v~p~~Ga~~a~~l~~~~~~~ 210 (230)
|.+...|+++|++|+++|+.+.+.+++.
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999988754
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=67.55 E-value=52 Score=27.23 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhh--ccc---cc-e
Q 026947 32 GISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ--EKQ---DQ-F 104 (230)
Q Consensus 32 ~~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~---~~-~ 104 (230)
..++.+++++.+.+..-+.. +| |--.++ -.+.||+++.+.+--|.-=.+|=++|+++.-.+.. ... +. .
T Consensus 70 l~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~ 145 (285)
T 3kcu_A 70 VGGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQW 145 (285)
T ss_dssp HHHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHH
T ss_pred HHHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHH
Confidence 34556666666555554444 44 322333 34578889888777766666666666655444321 100 00 0
Q ss_pred ee-------cCCCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 105 AG-------TLPAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 105 ~~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
.. .--+.+..+.|+-=+++-++.++.+...
T Consensus 146 ~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 146 GLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1122366777887888888888877664
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=56.68 E-value=5.9 Score=32.77 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhccc----ccee
Q 026947 31 PGISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEKQ----DQFA 105 (230)
Q Consensus 31 ~~~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~----~~~~ 105 (230)
+..++.+++++...+..-+.. +| |--....-.+.||.++++.+--|.-=.+|=++|+++.-.+..... ....
T Consensus 65 ll~g~~F~~Gl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~ 141 (268)
T 3tds_E 65 IVMGLSFAIALSLVIMTGTELFTG---NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVA 141 (268)
T ss_dssp HHHHHTCTHHHHHHHHHTCCCHHH---HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHH
Confidence 334555555555554443333 22 433222345788999888877776666677776655444432110 0000
Q ss_pred e-------cCCCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 106 G-------TLPAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 106 ~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
. .--+.+..+.|+-=+++-++.++.+...
T Consensus 142 ~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 142 EFFANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0012355677777778888888777653
No 29
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=55.30 E-value=5.4 Score=32.82 Aligned_cols=100 Identities=9% Similarity=0.127 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcc-----cc--c
Q 026947 32 GISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQEK-----QD--Q 103 (230)
Q Consensus 32 ~~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~-----~~--~ 103 (230)
..++.+++++...+..-+.. +| |-.......+.||.++++.+--|.-=.+|=++|+++...+.... ++ .
T Consensus 60 l~g~~F~vGl~lVvl~g~eLfTg---n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~ 136 (261)
T 4fc4_A 60 VMGATFGIALTLVIIAGSELFTG---HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTS 136 (261)
T ss_dssp HHHHHTTHHHHHHHHTCCCCHHH---HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTS
T ss_pred HHHHHHHHHHHHHHHcCCccccc---chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHH
Confidence 34555555554444333332 22 43322234556888988887777666666666665444433211 00 0
Q ss_pred ee-ecC---CCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 104 FA-GTL---PAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 104 ~~-~~~---~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
.. ... -+.+..+.|+-=+++-++.++.+...
T Consensus 137 ~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 137 IVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 01244566666677777777776654
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=52.32 E-value=3.5 Score=35.12 Aligned_cols=21 Identities=24% Similarity=0.302 Sum_probs=17.5
Q ss_pred ccCCcccccHHHHHHHHHhcC
Q 026947 49 GHISGAHFNPSVTIAHATCKR 69 (230)
Q Consensus 49 ~~iSGah~NPavTla~~l~g~ 69 (230)
+.-||||++||++++-.+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 345789999999999998754
No 31
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=29.71 E-value=27 Score=28.89 Aligned_cols=99 Identities=10% Similarity=0.175 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHccC-CcccccHHHHHHHHHhcCCCCCcccchhhhhhhHHHHHHHHHHHHhh--ccc---cc-e
Q 026947 32 GISIVWGLVVMVLVYSLGHI-SGAHFNPSVTIAHATCKRFPWKQVPPYILCQVLGSTLAAGTLRLLFQ--EKQ---DQ-F 104 (230)
Q Consensus 32 ~~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~~~---~~-~ 104 (230)
..++.+++++.+.+..-+.. +|-.+- ++ -.+.||+++++.+--|.-=.+|=++|+++.-.+.. ... +. .
T Consensus 69 l~g~~F~vGL~lVvl~g~ELFTgn~l~---~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~ 144 (280)
T 3kly_A 69 LGGLAFSLGLILVVITGGELFTSSVLI---LV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQL 144 (280)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTTCCC---CS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHH
T ss_pred HHHHHHHHHHHHHHHccccccccchHH---HH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHH
Confidence 34566666666555554444 443332 22 24578899999887777777777777665544421 100 00 0
Q ss_pred ee-------cCCCCChhHHHHHHHHHHHHHHHhhhee
Q 026947 105 AG-------TLPAGSNIQAFVMEFIITFYLMFVISGV 134 (230)
Q Consensus 105 ~~-------~~~~~s~~~~~~~E~~~T~~l~~~~~~~ 134 (230)
.. .--+.+..+.|+-=+++-++.++.+...
T Consensus 145 ~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 145 GLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1122366777888888888888877764
No 32
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=21.85 E-value=13 Score=31.47 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=16.9
Q ss_pred ccCcccchhhhHHHHHhhcC
Q 026947 163 ITGASMNPARSLGPAIVSSQ 182 (230)
Q Consensus 163 ~tG~~lNPA~~~~~~~~~~~ 182 (230)
=||+|++||.+++-.+-..+
T Consensus 11 GTgGHi~palala~~L~~~g 30 (365)
T 3s2u_A 11 GTGGHVFPALACAREFQARG 30 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 38899999999999987643
Done!