Query 026948
Match_columns 230
No_of_seqs 210 out of 2134
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 03:49:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 3.5E-17 1.2E-21 114.6 13.6 104 114-229 10-113 (126)
2 3gyz_A Chaperone protein IPGC; 99.7 5E-17 1.7E-21 117.4 13.1 102 115-228 34-135 (151)
3 4gcn_A Protein STI-1; structur 99.7 1.4E-16 4.9E-21 111.5 14.5 108 115-228 6-114 (127)
4 3ro3_A PINS homolog, G-protein 99.7 7.7E-16 2.6E-20 110.3 18.8 141 79-229 21-161 (164)
5 2hr2_A Hypothetical protein; a 99.7 2.7E-16 9.1E-21 113.3 15.0 116 115-230 9-135 (159)
6 3u3w_A Transcriptional activat 99.7 9.4E-16 3.2E-20 122.1 18.9 137 82-228 130-268 (293)
7 1qqe_A Vesicular transport pro 99.7 9.4E-16 3.2E-20 122.2 18.8 143 76-228 46-189 (292)
8 3ulq_A Response regulator aspa 99.7 1.7E-15 5.9E-20 124.7 19.5 137 81-227 117-254 (383)
9 3ulq_A Response regulator aspa 99.7 2.8E-15 9.6E-20 123.5 20.2 149 70-228 146-295 (383)
10 4ga2_A E3 SUMO-protein ligase 99.7 2.3E-16 7.7E-21 113.6 11.1 120 82-229 12-132 (150)
11 2qfc_A PLCR protein; TPR, HTH, 99.7 2.9E-15 1E-19 119.2 18.2 136 83-228 131-268 (293)
12 3q15_A PSP28, response regulat 99.7 3.2E-15 1.1E-19 123.0 18.9 137 82-228 116-253 (378)
13 3gw4_A Uncharacterized protein 99.7 8.9E-15 3.1E-19 109.3 18.9 141 78-228 37-178 (203)
14 2ifu_A Gamma-SNAP; membrane fu 99.7 2.3E-15 7.9E-20 120.8 16.5 114 110-224 109-222 (307)
15 4gyw_A UDP-N-acetylglucosamine 99.7 9.7E-16 3.3E-20 136.1 14.3 133 68-228 10-142 (723)
16 3q15_A PSP28, response regulat 99.7 1.1E-14 3.8E-19 119.8 19.2 146 72-228 146-292 (378)
17 2vgx_A Chaperone SYCD; alterna 99.7 2.3E-15 7.9E-20 108.1 12.9 102 115-228 19-120 (148)
18 3ro3_A PINS homolog, G-protein 99.6 1.4E-14 4.7E-19 103.7 16.6 118 111-228 3-120 (164)
19 2qfc_A PLCR protein; TPR, HTH, 99.6 1.2E-14 3.9E-19 115.8 17.3 152 67-228 75-227 (293)
20 3sz7_A HSC70 cochaperone (SGT) 99.6 6.7E-15 2.3E-19 107.1 13.6 106 112-229 6-111 (164)
21 2xcb_A PCRH, regulatory protei 99.6 5.4E-15 1.8E-19 105.2 12.6 103 114-228 15-117 (142)
22 3upv_A Heat shock protein STI1 99.6 7.2E-15 2.4E-19 102.1 12.9 100 116-227 3-102 (126)
23 3rkv_A Putative peptidylprolyl 99.6 6E-15 2E-19 107.1 13.0 109 115-229 9-129 (162)
24 2ifu_A Gamma-SNAP; membrane fu 99.6 2E-14 6.9E-19 115.3 17.0 144 74-228 43-186 (307)
25 1qqe_A Vesicular transport pro 99.6 1.5E-14 5.1E-19 115.2 15.9 150 69-228 79-230 (292)
26 3u3w_A Transcriptional activat 99.6 2.2E-14 7.5E-19 114.1 16.5 151 67-228 75-227 (293)
27 2pl2_A Hypothetical conserved 99.6 1.5E-14 5.2E-19 110.2 13.0 95 119-225 41-146 (217)
28 3urz_A Uncharacterized protein 99.6 1.8E-14 6.1E-19 109.2 12.7 132 69-228 6-188 (208)
29 3sf4_A G-protein-signaling mod 99.6 1.9E-13 6.6E-18 112.2 19.4 143 76-228 196-338 (406)
30 3vtx_A MAMA; tetratricopeptide 99.6 4.8E-14 1.6E-18 104.1 13.7 100 117-228 73-172 (184)
31 3gw4_A Uncharacterized protein 99.6 1.5E-13 5.2E-18 102.5 16.5 113 116-228 25-138 (203)
32 3ro2_A PINS homolog, G-protein 99.6 2.3E-13 7.9E-18 108.4 18.2 139 81-229 197-335 (338)
33 1hh8_A P67PHOX, NCF-2, neutrop 99.6 5.3E-14 1.8E-18 106.1 13.4 133 71-228 10-152 (213)
34 4a1s_A PINS, partner of inscut 99.6 2.4E-13 8.3E-18 112.3 18.5 137 82-228 238-374 (411)
35 3edt_B KLC 2, kinesin light ch 99.6 2.9E-13 9.9E-18 105.5 18.0 152 69-228 45-200 (283)
36 4i17_A Hypothetical protein; T 99.6 4.9E-14 1.7E-18 107.7 13.3 132 69-228 9-148 (228)
37 3sf4_A G-protein-signaling mod 99.6 5E-13 1.7E-17 109.7 20.0 136 83-228 163-298 (406)
38 4a1s_A PINS, partner of inscut 99.6 5.6E-13 1.9E-17 110.1 19.7 136 83-228 199-334 (411)
39 4gyw_A UDP-N-acetylglucosamine 99.5 3.4E-14 1.2E-18 126.2 12.5 132 69-228 45-176 (723)
40 3ro2_A PINS homolog, G-protein 99.5 8E-13 2.7E-17 105.2 19.4 136 83-228 159-294 (338)
41 2pl2_A Hypothetical conserved 99.5 7.6E-14 2.6E-18 106.4 12.5 128 73-229 45-183 (217)
42 3q49_B STIP1 homology and U bo 99.5 1.4E-13 4.8E-18 96.5 13.0 102 116-229 8-109 (137)
43 1hxi_A PEX5, peroxisome target 99.5 5.1E-14 1.7E-18 97.6 10.3 99 119-229 19-117 (121)
44 3vtx_A MAMA; tetratricopeptide 99.5 2.2E-13 7.5E-18 100.5 14.3 131 71-229 9-139 (184)
45 3nf1_A KLC 1, kinesin light ch 99.5 5.2E-13 1.8E-17 105.7 16.5 146 74-227 34-183 (311)
46 3edt_B KLC 2, kinesin light ch 99.5 3.8E-13 1.3E-17 104.8 15.3 114 114-227 40-157 (283)
47 4gco_A Protein STI-1; structur 99.5 1.8E-13 6E-18 95.5 11.8 116 64-207 10-125 (126)
48 4ga2_A E3 SUMO-protein ligase 99.5 2.3E-14 7.7E-19 103.1 7.0 96 122-229 2-97 (150)
49 3nf1_A KLC 1, kinesin light ch 99.5 1.4E-12 4.6E-17 103.3 18.0 140 80-227 82-225 (311)
50 2h6f_A Protein farnesyltransfe 99.5 6E-14 2E-18 116.0 10.1 120 81-228 111-231 (382)
51 4i17_A Hypothetical protein; T 99.5 2.3E-13 7.9E-18 103.9 12.0 134 74-229 49-212 (228)
52 3urz_A Uncharacterized protein 99.5 5.5E-13 1.9E-17 100.9 13.9 100 118-229 5-120 (208)
53 1elw_A TPR1-domain of HOP; HOP 99.5 6.2E-13 2.1E-17 90.0 12.7 101 116-228 3-103 (118)
54 2fbn_A 70 kDa peptidylprolyl i 99.5 4.5E-13 1.5E-17 100.3 12.8 111 113-229 34-154 (198)
55 1elr_A TPR2A-domain of HOP; HO 99.5 8.4E-13 2.9E-17 91.1 13.2 107 116-228 3-110 (131)
56 2vyi_A SGTA protein; chaperone 99.5 1E-12 3.5E-17 90.5 13.6 105 112-228 7-111 (131)
57 1p5q_A FKBP52, FK506-binding p 99.5 2.9E-13 9.9E-18 110.0 12.5 111 113-229 143-262 (336)
58 2xev_A YBGF; tetratricopeptide 99.5 5.2E-13 1.8E-17 92.5 11.9 105 119-229 4-108 (129)
59 1a17_A Serine/threonine protei 99.5 8.6E-13 3E-17 95.1 13.3 104 114-229 10-113 (166)
60 3uq3_A Heat shock protein STI1 99.5 2.1E-12 7.2E-17 99.4 16.3 133 81-228 52-204 (258)
61 2e2e_A Formate-dependent nitri 99.5 2.9E-13 9.9E-18 99.4 10.8 102 116-229 43-147 (177)
62 2lni_A Stress-induced-phosphop 99.5 2.6E-13 9.1E-18 94.1 9.7 103 114-228 13-115 (133)
63 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.2E-12 4.2E-17 101.9 14.3 124 82-229 20-143 (275)
64 3qky_A Outer membrane assembly 99.5 1.1E-12 3.6E-17 102.4 13.5 143 68-229 16-180 (261)
65 3n71_A Histone lysine methyltr 99.5 4.4E-12 1.5E-16 107.8 18.0 147 73-227 315-465 (490)
66 3as5_A MAMA; tetratricopeptide 99.5 4.1E-12 1.4E-16 92.7 15.4 120 82-229 57-176 (186)
67 3uq3_A Heat shock protein STI1 99.5 2.6E-12 9E-17 98.9 14.9 101 115-227 137-237 (258)
68 2dba_A Smooth muscle cell asso 99.5 7.9E-13 2.7E-17 93.5 11.0 105 116-229 27-131 (148)
69 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 9.4E-13 3.2E-17 111.4 13.2 110 113-228 264-382 (457)
70 3k9i_A BH0479 protein; putativ 99.4 3.2E-13 1.1E-17 92.6 8.4 92 129-229 2-93 (117)
71 1p5q_A FKBP52, FK506-binding p 99.4 1.6E-12 5.4E-17 105.7 13.9 148 67-227 147-295 (336)
72 1a17_A Serine/threonine protei 99.4 2.6E-12 8.8E-17 92.6 13.5 132 69-228 15-148 (166)
73 2fo7_A Synthetic consensus TPR 99.4 3E-12 1E-16 88.3 13.2 120 82-229 16-135 (136)
74 1ihg_A Cyclophilin 40; ppiase 99.4 1.8E-12 6.2E-17 106.7 13.7 109 115-229 221-339 (370)
75 3as5_A MAMA; tetratricopeptide 99.4 3E-12 1E-16 93.4 13.5 129 72-228 13-141 (186)
76 1hz4_A MALT regulatory protein 99.4 2.3E-11 8E-16 99.4 19.8 113 116-228 52-166 (373)
77 1na0_A Designed protein CTPR3; 99.4 3.5E-12 1.2E-16 87.0 12.7 101 116-228 8-108 (125)
78 2kck_A TPR repeat; tetratricop 99.4 4.5E-13 1.5E-17 90.0 7.8 99 119-229 8-109 (112)
79 3n71_A Histone lysine methyltr 99.4 9.8E-12 3.3E-16 105.7 16.7 110 119-228 311-424 (490)
80 2vq2_A PILW, putative fimbrial 99.4 6.4E-12 2.2E-16 94.7 14.1 122 81-228 56-178 (225)
81 2q7f_A YRRB protein; TPR, prot 99.4 3.2E-12 1.1E-16 97.7 12.6 125 76-228 66-190 (243)
82 3hym_B Cell division cycle pro 99.4 2.1E-12 7.1E-17 103.1 11.4 106 117-228 193-301 (330)
83 4eqf_A PEX5-related protein; a 99.4 5.5E-12 1.9E-16 102.7 13.8 135 72-228 104-278 (365)
84 3upv_A Heat shock protein STI1 99.4 7.6E-12 2.6E-16 86.5 12.5 121 68-210 5-125 (126)
85 3u4t_A TPR repeat-containing p 99.4 7.7E-13 2.6E-17 103.1 8.2 98 119-225 39-136 (272)
86 3qww_A SET and MYND domain-con 99.4 1.5E-11 5.1E-16 103.0 16.3 105 124-228 305-413 (433)
87 4abn_A Tetratricopeptide repea 99.4 3.7E-12 1.3E-16 108.1 12.6 127 74-229 144-290 (474)
88 2q7f_A YRRB protein; TPR, prot 99.4 5.8E-12 2E-16 96.3 12.5 120 82-229 106-225 (243)
89 4eqf_A PEX5-related protein; a 99.4 9E-12 3.1E-16 101.4 14.3 137 70-228 68-244 (365)
90 2c2l_A CHIP, carboxy terminus 99.4 3E-12 1E-16 101.4 11.1 100 117-228 4-103 (281)
91 1hz4_A MALT regulatory protein 99.4 2.9E-11 1E-15 98.8 17.1 140 78-228 64-205 (373)
92 2h6f_A Protein farnesyltransfe 99.4 9.5E-13 3.2E-17 108.8 8.1 132 70-229 134-272 (382)
93 4gcn_A Protein STI-1; structur 99.4 3.2E-11 1.1E-15 84.0 14.8 103 69-187 10-113 (127)
94 1fch_A Peroxisomal targeting s 99.4 1.6E-11 5.4E-16 99.7 14.9 125 79-229 193-317 (368)
95 2vq2_A PILW, putative fimbrial 99.4 1.7E-11 5.7E-16 92.4 14.0 102 116-229 112-214 (225)
96 2vsy_A XCC0866; transferase, g 99.4 1.3E-11 4.5E-16 106.8 15.2 129 72-228 28-159 (568)
97 3hym_B Cell division cycle pro 99.4 9.7E-12 3.3E-16 99.1 12.9 126 81-228 139-267 (330)
98 2ho1_A Type 4 fimbrial biogene 99.4 1.8E-11 6.2E-16 94.3 13.7 121 82-228 86-206 (252)
99 3qky_A Outer membrane assembly 99.4 1.6E-11 5.6E-16 95.6 13.5 144 70-229 55-227 (261)
100 2vsy_A XCC0866; transferase, g 99.3 4.1E-12 1.4E-16 110.0 10.9 119 83-229 5-123 (568)
101 2pzi_A Probable serine/threoni 99.3 1.1E-12 3.6E-17 116.3 7.2 126 74-228 440-565 (681)
102 1hh8_A P67PHOX, NCF-2, neutrop 99.3 1.1E-11 3.8E-16 93.2 11.7 98 116-228 5-102 (213)
103 2fbn_A 70 kDa peptidylprolyl i 99.3 8.1E-12 2.8E-16 93.4 10.7 150 63-224 34-184 (198)
104 3cv0_A Peroxisome targeting si 99.3 2.9E-11 1E-15 96.2 14.2 120 82-229 153-272 (327)
105 4g1t_A Interferon-induced prot 99.3 1.4E-11 4.8E-16 103.5 13.0 114 116-229 50-170 (472)
106 1w3b_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.8E-16 101.7 12.1 97 119-227 239-335 (388)
107 1xnf_A Lipoprotein NLPI; TPR, 99.3 3.2E-11 1.1E-15 93.8 14.0 133 74-228 50-246 (275)
108 2ho1_A Type 4 fimbrial biogene 99.3 2.7E-11 9.2E-16 93.3 13.5 102 116-229 140-241 (252)
109 2xpi_A Anaphase-promoting comp 99.3 3.7E-11 1.3E-15 103.8 15.6 107 117-229 475-582 (597)
110 1fch_A Peroxisomal targeting s 99.3 8.9E-12 3.1E-16 101.1 10.8 127 81-229 231-362 (368)
111 1w3b_A UDP-N-acetylglucosamine 99.3 8.9E-12 3.1E-16 102.3 10.8 97 119-227 273-369 (388)
112 2if4_A ATFKBP42; FKBP-like, al 99.3 4.5E-12 1.5E-16 103.1 8.5 110 113-228 175-295 (338)
113 4b4t_Q 26S proteasome regulato 99.3 8.3E-11 2.8E-15 97.8 16.4 149 70-228 58-206 (434)
114 3cv0_A Peroxisome targeting si 99.3 1.6E-11 5.4E-16 97.8 11.0 126 82-229 187-318 (327)
115 3u4t_A TPR repeat-containing p 99.3 2.8E-11 9.4E-16 94.2 12.0 127 81-229 122-253 (272)
116 3ieg_A DNAJ homolog subfamily 99.3 3.5E-11 1.2E-15 96.8 13.0 132 69-228 5-151 (359)
117 4b4t_Q 26S proteasome regulato 99.3 1.3E-10 4.3E-15 96.6 16.7 156 72-227 9-165 (434)
118 3ieg_A DNAJ homolog subfamily 99.3 9.5E-11 3.3E-15 94.2 15.4 102 120-229 237-338 (359)
119 2l6j_A TPR repeat-containing p 99.3 1.1E-12 3.9E-17 88.3 3.3 101 116-222 3-103 (111)
120 2yhc_A BAMD, UPF0169 lipoprote 99.3 4.4E-11 1.5E-15 91.4 12.5 141 70-229 7-179 (225)
121 3rkv_A Putative peptidylprolyl 99.3 2.4E-11 8.1E-16 87.9 10.5 137 66-214 10-149 (162)
122 2fo7_A Synthetic consensus TPR 99.3 5.1E-11 1.8E-15 82.0 11.5 98 119-228 3-100 (136)
123 2vyi_A SGTA protein; chaperone 99.3 5.2E-11 1.8E-15 81.8 11.3 116 70-213 15-130 (131)
124 1wao_1 Serine/threonine protei 99.3 3.1E-12 1.1E-16 108.7 6.0 101 116-228 5-105 (477)
125 4abn_A Tetratricopeptide repea 99.3 4.7E-12 1.6E-16 107.5 7.1 116 84-228 120-252 (474)
126 1zu2_A Mitochondrial import re 99.3 3.5E-12 1.2E-16 91.6 5.1 88 130-229 15-123 (158)
127 2lni_A Stress-induced-phosphop 99.3 5.6E-11 1.9E-15 82.1 11.2 116 69-212 18-133 (133)
128 3qwp_A SET and MYND domain-con 99.3 1.1E-10 3.7E-15 97.8 14.6 108 121-228 291-402 (429)
129 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 3.2E-11 1.1E-15 102.0 11.2 146 66-224 267-413 (457)
130 3gyz_A Chaperone protein IPGC; 99.3 7.6E-11 2.6E-15 84.7 11.5 103 63-187 32-134 (151)
131 2hr2_A Hypothetical protein; a 99.3 2E-10 6.8E-15 82.6 13.4 121 66-190 10-135 (159)
132 2pzi_A Probable serine/threoni 99.2 1.3E-11 4.5E-16 109.2 8.3 100 116-228 432-531 (681)
133 2y4t_A DNAJ homolog subfamily 99.2 1.3E-10 4.5E-15 96.8 13.8 101 121-229 261-361 (450)
134 2xpi_A Anaphase-promoting comp 99.2 1.9E-10 6.4E-15 99.4 15.1 106 117-228 441-547 (597)
135 2r5s_A Uncharacterized protein 99.2 2.4E-11 8.2E-16 89.2 7.7 66 156-227 107-174 (176)
136 1na3_A Designed protein CTPR2; 99.2 1.2E-10 4.2E-15 75.2 10.3 84 116-211 8-91 (91)
137 3fp2_A TPR repeat-containing p 99.2 9E-11 3.1E-15 99.9 12.3 105 119-229 380-494 (537)
138 3sz7_A HSC70 cochaperone (SGT) 99.2 1.2E-10 4E-15 84.4 11.1 111 68-206 12-122 (164)
139 2y4t_A DNAJ homolog subfamily 99.2 1.9E-10 6.4E-15 95.9 13.3 134 67-228 26-174 (450)
140 1ihg_A Cyclophilin 40; ppiase 99.2 1.2E-10 3.9E-15 95.9 11.4 139 69-219 225-363 (370)
141 1ouv_A Conserved hypothetical 99.2 4.6E-10 1.6E-14 87.7 14.1 94 117-226 74-179 (273)
142 2xcb_A PCRH, regulatory protei 99.2 1.4E-10 4.9E-15 82.0 10.0 101 66-188 17-117 (142)
143 2yhc_A BAMD, UPF0169 lipoprote 99.2 3.2E-10 1.1E-14 86.5 12.6 106 118-229 5-128 (225)
144 3fp2_A TPR repeat-containing p 99.2 1.8E-10 6.2E-15 98.0 12.2 100 117-228 310-409 (537)
145 3qou_A Protein YBBN; thioredox 99.2 9.1E-11 3.1E-15 93.1 9.7 135 70-226 120-284 (287)
146 2gw1_A Mitochondrial precursor 99.2 6.9E-11 2.3E-15 99.9 9.4 105 118-228 373-480 (514)
147 2kat_A Uncharacterized protein 99.2 1.1E-10 3.9E-15 79.3 8.6 82 135-228 3-84 (115)
148 3mkr_A Coatomer subunit epsilo 99.2 3.4E-10 1.1E-14 90.0 12.7 90 128-229 177-267 (291)
149 2vgx_A Chaperone SYCD; alterna 99.2 1.3E-10 4.6E-15 83.0 9.2 100 66-187 20-119 (148)
150 2if4_A ATFKBP42; FKBP-like, al 99.2 1.8E-11 6.2E-16 99.5 4.7 148 69-228 181-330 (338)
151 1wao_1 Serine/threonine protei 99.2 1.3E-11 4.3E-16 105.0 3.4 112 82-221 21-134 (477)
152 2gw1_A Mitochondrial precursor 99.1 5.6E-10 1.9E-14 94.3 13.5 102 114-228 3-104 (514)
153 4g1t_A Interferon-induced prot 99.1 1.5E-10 5.2E-15 97.2 9.8 142 74-228 58-206 (472)
154 3qwp_A SET and MYND domain-con 99.1 2.1E-09 7.3E-14 90.0 16.0 130 73-210 293-426 (429)
155 3ma5_A Tetratricopeptide repea 99.1 1.9E-10 6.6E-15 76.5 7.7 66 156-227 6-71 (100)
156 3k9i_A BH0479 protein; putativ 99.1 2.1E-10 7.3E-15 78.3 8.0 87 82-187 5-91 (117)
157 3mkr_A Coatomer subunit epsilo 99.1 1.2E-09 4.1E-14 86.8 12.7 103 117-229 130-232 (291)
158 1elr_A TPR2A-domain of HOP; HO 99.1 2.1E-09 7.2E-14 73.6 12.5 115 74-211 11-126 (131)
159 1na0_A Designed protein CTPR3; 99.1 1.9E-09 6.5E-14 73.1 12.0 103 81-211 23-125 (125)
160 1ouv_A Conserved hypothetical 99.1 1.2E-09 4E-14 85.4 12.3 93 118-226 39-143 (273)
161 3q49_B STIP1 homology and U bo 99.1 8.8E-10 3E-14 76.8 10.3 119 70-211 12-130 (137)
162 3rjv_A Putative SEL1 repeat pr 99.1 1E-09 3.5E-14 83.1 10.7 97 119-226 87-197 (212)
163 2r5s_A Uncharacterized protein 99.1 7E-10 2.4E-14 81.3 9.4 103 120-228 9-139 (176)
164 1elw_A TPR1-domain of HOP; HOP 99.1 1.4E-09 4.8E-14 73.1 10.1 110 70-207 7-116 (118)
165 1klx_A Cysteine rich protein B 99.1 2.9E-09 1E-13 75.1 11.6 88 123-226 31-126 (138)
166 2dba_A Smooth muscle cell asso 99.0 2.8E-09 9.5E-14 74.9 10.8 115 70-209 31-145 (148)
167 2c2l_A CHIP, carboxy terminus 99.0 3.4E-10 1.1E-14 89.5 6.6 99 70-190 7-105 (281)
168 3qou_A Protein YBBN; thioredox 99.0 1.9E-09 6.5E-14 85.4 11.0 67 116-186 218-284 (287)
169 2kat_A Uncharacterized protein 99.0 3E-09 1E-13 72.1 10.2 86 116-211 18-103 (115)
170 1zu2_A Mitochondrial import re 99.0 6.6E-10 2.3E-14 79.7 7.1 85 81-187 16-121 (158)
171 3qww_A SET and MYND domain-con 99.0 9.5E-09 3.3E-13 86.0 15.0 114 83-204 314-431 (433)
172 3rjv_A Putative SEL1 repeat pr 99.0 5.2E-09 1.8E-13 79.1 12.3 114 80-226 31-158 (212)
173 1na3_A Designed protein CTPR2; 99.0 2.7E-09 9.3E-14 68.7 9.2 69 154-228 6-74 (91)
174 4f3v_A ESX-1 secretion system 99.0 7.4E-09 2.5E-13 81.5 13.1 127 77-228 112-239 (282)
175 2xev_A YBGF; tetratricopeptide 99.0 5.5E-09 1.9E-13 71.9 11.1 112 75-208 10-121 (129)
176 2kc7_A BFR218_protein; tetratr 99.0 6.4E-10 2.2E-14 73.3 6.0 89 120-228 3-92 (99)
177 1hxi_A PEX5, peroxisome target 99.0 1E-09 3.5E-14 75.6 7.2 92 74-187 24-115 (121)
178 2l6j_A TPR repeat-containing p 99.0 2.1E-09 7.1E-14 71.9 8.5 68 156-229 3-70 (111)
179 3ma5_A Tetratricopeptide repea 99.0 3.1E-09 1.1E-13 70.5 9.0 87 116-212 6-92 (100)
180 2e2e_A Formate-dependent nitri 99.0 6.6E-10 2.3E-14 81.2 5.8 91 127-229 20-113 (177)
181 2ond_A Cleavage stimulation fa 98.9 5.1E-09 1.7E-13 83.6 10.6 51 170-226 182-232 (308)
182 2ond_A Cleavage stimulation fa 98.9 3.5E-09 1.2E-13 84.5 8.8 100 116-227 98-199 (308)
183 2v5f_A Prolyl 4-hydroxylase su 98.9 3.1E-08 1E-12 66.3 10.8 83 117-205 5-88 (104)
184 2v5f_A Prolyl 4-hydroxylase su 98.8 4.7E-08 1.6E-12 65.3 10.9 71 159-229 7-78 (104)
185 2kc7_A BFR218_protein; tetratr 98.8 2.7E-08 9.1E-13 65.3 8.5 63 161-229 4-67 (99)
186 2xm6_A Protein corresponding t 98.7 1.1E-07 3.8E-12 80.6 12.4 94 118-227 329-433 (490)
187 2xm6_A Protein corresponding t 98.7 1.7E-07 5.9E-12 79.4 12.9 92 119-226 113-216 (490)
188 1dce_A Protein (RAB geranylger 98.7 1.5E-07 5.1E-12 81.5 10.7 118 83-228 45-175 (567)
189 1dce_A Protein (RAB geranylger 98.6 1.8E-07 6.3E-12 81.0 11.0 119 83-229 89-224 (567)
190 2kck_A TPR repeat; tetratricop 98.6 6.7E-08 2.3E-12 64.1 6.6 66 157-228 6-71 (112)
191 3dra_A Protein farnesyltransfe 98.5 1E-06 3.5E-11 70.4 11.9 131 70-228 35-177 (306)
192 3ffl_A Anaphase-promoting comp 98.5 4.8E-06 1.6E-10 59.6 14.0 104 119-222 22-147 (167)
193 3e4b_A ALGK; tetratricopeptide 98.5 5.4E-07 1.8E-11 75.9 10.7 90 118-225 249-350 (452)
194 2ooe_A Cleavage stimulation fa 98.5 4.8E-07 1.7E-11 77.4 10.2 99 117-226 321-454 (530)
195 3e4b_A ALGK; tetratricopeptide 98.5 7.6E-07 2.6E-11 74.9 10.0 109 82-224 194-314 (452)
196 4f3v_A ESX-1 secretion system 98.5 3.3E-07 1.1E-11 72.1 7.0 138 76-225 56-199 (282)
197 2ooe_A Cleavage stimulation fa 98.4 5.1E-07 1.7E-11 77.3 8.3 98 117-226 272-385 (530)
198 3dss_A Geranylgeranyl transfer 98.4 1.2E-05 4.2E-10 64.7 14.1 120 83-230 90-226 (331)
199 1xi4_A Clathrin heavy chain; a 98.3 5.7E-06 2E-10 77.3 12.9 97 117-225 1105-1223(1630)
200 1pc2_A Mitochondria fission pr 98.3 3.5E-06 1.2E-10 59.8 9.0 69 156-228 31-102 (152)
201 3bee_A Putative YFRE protein; 98.3 3.1E-06 1.1E-10 55.2 7.8 64 157-226 6-72 (93)
202 3dra_A Protein farnesyltransfe 98.3 4.4E-06 1.5E-10 66.7 9.9 101 117-229 103-218 (306)
203 3dss_A Geranylgeranyl transfer 98.3 1.4E-05 4.7E-10 64.4 12.6 102 116-229 63-177 (331)
204 1klx_A Cysteine rich protein B 98.3 1.8E-06 6.1E-11 60.6 6.3 78 131-226 9-90 (138)
205 3ly7_A Transcriptional activat 98.2 1.3E-05 4.6E-10 65.1 11.2 124 82-228 214-341 (372)
206 3q7a_A Farnesyltransferase alp 98.2 4.4E-06 1.5E-10 67.7 8.1 119 82-228 69-198 (349)
207 1xi4_A Clathrin heavy chain; a 98.2 2.1E-05 7.3E-10 73.6 13.3 94 118-225 1135-1249(1630)
208 3bee_A Putative YFRE protein; 98.1 1.1E-05 3.9E-10 52.5 7.8 80 117-205 6-88 (93)
209 3q7a_A Farnesyltransferase alp 98.0 9.4E-06 3.2E-10 65.8 6.8 119 83-229 105-240 (349)
210 3u64_A Protein TP_0956; tetrat 98.0 3.2E-05 1.1E-09 60.7 9.1 103 116-228 151-271 (301)
211 1pc2_A Mitochondria fission pr 98.0 0.00011 3.6E-09 52.1 11.0 76 117-202 32-110 (152)
212 1b89_A Protein (clathrin heavy 97.9 7.4E-06 2.5E-10 68.2 4.5 94 119-226 124-236 (449)
213 3txn_A 26S proteasome regulato 97.9 0.00059 2E-08 56.1 14.9 108 120-227 102-211 (394)
214 3mv2_B Coatomer subunit epsilo 97.9 0.00027 9.4E-09 56.2 12.3 123 81-226 114-240 (310)
215 3ffl_A Anaphase-promoting comp 97.8 0.00042 1.4E-08 49.6 11.6 89 112-207 58-165 (167)
216 3mv2_B Coatomer subunit epsilo 97.8 0.00023 7.7E-09 56.7 10.6 100 119-228 102-209 (310)
217 1b89_A Protein (clathrin heavy 97.5 1.9E-05 6.5E-10 65.8 0.4 81 119-225 96-176 (449)
218 1nzn_A CGI-135 protein, fissio 97.2 0.0012 4.2E-08 45.0 6.6 69 156-228 34-105 (126)
219 4b4t_P 26S proteasome regulato 97.2 0.022 7.6E-07 47.7 15.8 113 115-227 135-248 (445)
220 3u64_A Protein TP_0956; tetrat 97.0 0.0015 5.1E-08 51.2 6.7 74 109-187 191-270 (301)
221 3ly7_A Transcriptional activat 97.0 0.0036 1.2E-07 50.9 9.1 106 116-227 195-307 (372)
222 4b4t_R RPN7, 26S proteasome re 96.9 0.0063 2.1E-07 50.7 10.1 106 119-227 133-238 (429)
223 1nzn_A CGI-135 protein, fissio 96.9 0.051 1.7E-06 37.0 13.2 65 119-187 37-104 (126)
224 3txn_A 26S proteasome regulato 96.7 0.19 6.6E-06 41.2 19.0 98 130-227 72-169 (394)
225 4e6h_A MRNA 3'-END-processing 96.6 0.034 1.2E-06 49.1 12.6 106 119-229 380-502 (679)
226 3o48_A Mitochondria fission 1 96.5 0.032 1.1E-06 38.2 9.3 66 157-227 40-108 (134)
227 1y8m_A FIS1; mitochondria, unk 96.4 0.05 1.7E-06 37.8 9.7 65 157-226 39-106 (144)
228 3kae_A CDC27, possible protein 96.2 0.12 4.1E-06 37.2 11.3 96 120-226 36-143 (242)
229 4e6h_A MRNA 3'-END-processing 96.2 0.038 1.3E-06 48.8 10.5 103 118-226 344-463 (679)
230 1ya0_A SMG-7 transcript varian 96.1 0.021 7.3E-07 48.4 8.2 64 157-226 152-215 (497)
231 2ff4_A Probable regulatory pro 95.9 0.095 3.3E-06 42.9 11.3 106 116-227 114-235 (388)
232 4g26_A Pentatricopeptide repea 95.9 0.094 3.2E-06 44.5 11.5 97 119-225 107-203 (501)
233 1ya0_A SMG-7 transcript varian 95.9 0.028 9.5E-07 47.7 8.1 79 119-209 154-232 (497)
234 4gns_B Protein CSD3, chitin bi 95.8 0.1 3.5E-06 46.5 11.6 57 159-221 339-395 (754)
235 3o48_A Mitochondria fission 1 95.8 0.2 6.9E-06 34.3 10.5 64 119-187 42-108 (134)
236 1y8m_A FIS1; mitochondria, unk 95.5 0.24 8.1E-06 34.4 10.1 64 119-187 41-107 (144)
237 4h7y_A Dual specificity protei 95.4 0.11 3.9E-06 36.4 8.2 102 120-228 16-125 (161)
238 4b4t_P 26S proteasome regulato 95.1 1.2 4.2E-05 37.0 16.4 83 111-193 171-254 (445)
239 2wpv_A GET4, UPF0363 protein Y 94.5 1.3 4.5E-05 35.0 13.2 102 119-221 55-158 (312)
240 2uy1_A Cleavage stimulation fa 94.4 0.62 2.1E-05 39.4 11.9 104 117-228 213-351 (493)
241 4b4t_S RPN3, 26S proteasome re 93.3 0.091 3.1E-06 44.5 4.7 108 119-227 183-300 (523)
242 4b4t_R RPN7, 26S proteasome re 92.9 0.21 7.1E-06 41.5 6.3 70 156-228 130-199 (429)
243 3mkq_A Coatomer beta'-subunit; 92.3 4.4 0.00015 35.7 14.5 96 119-215 683-801 (814)
244 3lpz_A GET4 (YOR164C homolog); 92.3 3.6 0.00012 32.8 14.3 101 119-220 57-159 (336)
245 3spa_A Mtrpol, DNA-directed RN 91.9 1.3 4.3E-05 41.0 10.3 100 118-225 128-229 (1134)
246 4g26_A Pentatricopeptide repea 91.8 2.5 8.4E-05 35.8 11.7 84 132-225 85-168 (501)
247 3kae_A CDC27, possible protein 91.1 3.2 0.00011 29.9 10.7 70 117-186 62-143 (242)
248 3mkq_B Coatomer subunit alpha; 90.2 3.9 0.00013 29.4 10.1 47 128-185 16-62 (177)
249 2uy1_A Cleavage stimulation fa 90.0 0.91 3.1E-05 38.3 7.4 90 121-223 290-380 (493)
250 3mkq_A Coatomer beta'-subunit; 89.5 4.7 0.00016 35.6 12.0 26 158-183 682-707 (814)
251 4h7y_A Dual specificity protei 89.2 2.7 9.3E-05 29.5 7.9 85 88-187 40-124 (161)
252 2crb_A Nuclear receptor bindin 87.8 1.3 4.4E-05 28.0 5.0 32 155-186 13-44 (97)
253 4a5x_A MITD1, MIT domain-conta 87.5 1.7 5.9E-05 27.2 5.6 37 111-147 10-46 (86)
254 4b4t_S RPN3, 26S proteasome re 87.4 1.4 4.8E-05 37.4 6.6 75 111-187 225-300 (523)
255 2crb_A Nuclear receptor bindin 87.0 4.2 0.00014 25.7 7.1 35 113-147 11-45 (97)
256 4fhn_B Nucleoporin NUP120; pro 86.9 2.6 8.8E-05 39.6 8.8 102 119-221 844-962 (1139)
257 2w2u_A Hypothetical P60 katani 86.6 1.6 5.4E-05 27.2 5.1 26 160-185 22-47 (83)
258 4gns_B Protein CSD3, chitin bi 86.5 2.2 7.4E-05 38.1 7.7 58 120-183 340-397 (754)
259 3mkq_B Coatomer subunit alpha; 86.2 2.3 7.9E-05 30.6 6.4 47 167-224 15-61 (177)
260 2ff4_A Probable regulatory pro 86.1 4.7 0.00016 32.8 9.1 71 118-194 172-243 (388)
261 2rpa_A Katanin P60 ATPase-cont 85.4 0.92 3.2E-05 27.9 3.4 24 202-225 17-40 (78)
262 2v6y_A AAA family ATPase, P60 85.2 2 7E-05 26.6 5.1 19 208-226 22-40 (83)
263 3re2_A Predicted protein; meni 83.9 4.2 0.00015 32.7 7.3 68 135-203 275-342 (472)
264 2w2u_A Hypothetical P60 katani 83.5 3.6 0.00012 25.5 5.6 33 115-147 17-49 (83)
265 4b4t_O 26S proteasome regulato 82.6 17 0.00058 29.6 11.0 102 126-227 85-199 (393)
266 3u84_A Menin; MLL, JUND, ledgf 81.8 5.5 0.00019 32.8 7.3 68 135-203 297-364 (550)
267 2v6y_A AAA family ATPase, P60 81.5 4.7 0.00016 24.9 5.6 32 116-147 10-41 (83)
268 3re2_A Predicted protein; meni 81.0 17 0.0006 29.3 9.8 87 141-228 239-327 (472)
269 4a5x_A MITD1, MIT domain-conta 80.2 4 0.00014 25.5 5.0 31 156-186 15-45 (86)
270 1wfd_A Hypothetical protein 15 80.0 4.1 0.00014 25.8 5.1 30 157-186 15-44 (93)
271 2rpa_A Katanin P60 ATPase-cont 79.5 3.1 0.00011 25.5 4.2 33 116-148 11-43 (78)
272 2v6x_A Vacuolar protein sortin 79.1 4 0.00014 25.3 4.8 32 155-186 11-42 (85)
273 4gq2_M Nucleoporin NUP120; bet 78.9 30 0.001 31.8 12.2 70 159-228 842-928 (950)
274 2v6x_A Vacuolar protein sortin 77.9 8.2 0.00028 23.8 6.0 36 113-148 9-44 (85)
275 1zbp_A Hypothetical protein VP 77.4 23 0.00077 27.3 11.3 96 126-227 6-130 (273)
276 3t5v_B Nuclear mRNA export pro 77.1 30 0.001 28.8 10.8 69 119-188 178-252 (455)
277 4gq2_M Nucleoporin NUP120; bet 77.0 21 0.00073 32.8 10.7 91 119-210 842-949 (950)
278 1wfd_A Hypothetical protein 15 76.9 8 0.00027 24.5 5.8 36 113-148 11-46 (93)
279 4gq4_A Menin; tumor suppressor 76.4 25 0.00086 28.9 9.6 86 141-227 246-333 (489)
280 2cpt_A SKD1 protein, vacuolar 76.2 5.1 0.00018 26.6 4.9 31 156-186 17-47 (117)
281 4gq4_A Menin; tumor suppressor 76.2 8.7 0.0003 31.6 6.9 68 135-203 282-349 (489)
282 3u84_A Menin; MLL, JUND, ledgf 75.9 28 0.00096 28.7 9.7 86 142-228 262-349 (550)
283 1qsa_A Protein (soluble lytic 72.2 18 0.00062 31.4 8.6 91 122-225 257-347 (618)
284 3spa_A Mtrpol, DNA-directed RN 72.1 26 0.00088 32.7 9.7 68 156-225 126-193 (1134)
285 3t5x_A PCI domain-containing p 71.4 23 0.0008 25.8 8.0 60 113-173 10-69 (203)
286 1zbp_A Hypothetical protein VP 70.4 11 0.00036 29.1 5.9 57 166-228 6-62 (273)
287 4fhn_B Nucleoporin NUP120; pro 70.4 24 0.00081 33.1 9.5 70 159-228 844-930 (1139)
288 3t5x_A PCI domain-containing p 70.1 17 0.00058 26.6 6.9 34 154-187 11-44 (203)
289 4b4t_O 26S proteasome regulato 70.1 42 0.0014 27.2 10.6 73 115-187 125-199 (393)
290 2cpt_A SKD1 protein, vacuolar 69.6 12 0.00042 24.7 5.5 35 114-148 15-49 (117)
291 2wm9_A Dedicator of cytokinesi 67.4 51 0.0018 27.1 10.5 30 113-142 7-36 (428)
292 3ax2_A Mitochondrial import re 67.3 10 0.00035 22.8 4.2 27 161-187 21-47 (73)
293 1om2_A Protein (mitochondrial 67.1 18 0.00061 23.0 5.5 24 122-145 25-48 (95)
294 2dl1_A Spartin; SPG20, MIT, st 66.9 11 0.00038 24.9 4.7 17 211-227 36-52 (116)
295 2yin_A DOCK2, dedicator of cyt 66.6 54 0.0018 27.1 11.8 93 117-209 35-145 (436)
296 3ax2_A Mitochondrial import re 61.1 14 0.00046 22.3 4.0 29 200-228 20-48 (73)
297 4a1g_A Mitotic checkpoint seri 58.5 33 0.0011 23.8 6.2 79 138-226 49-130 (152)
298 2vkj_A TM1634; membrane protei 58.4 31 0.0011 21.6 7.3 48 156-207 52-100 (106)
299 2cwy_A Hypothetical protein TT 58.0 25 0.00086 22.2 5.1 63 122-188 6-70 (94)
300 2wvi_A Mitotic checkpoint seri 57.9 38 0.0013 23.8 6.5 78 139-226 45-125 (164)
301 3lew_A SUSD-like carbohydrate 54.8 33 0.0011 28.8 6.8 33 194-226 200-232 (495)
302 2vkj_A TM1634; membrane protei 54.4 37 0.0013 21.2 7.1 48 115-166 51-99 (106)
303 3snx_A SUSD homolog, putative 54.3 28 0.00097 28.9 6.3 32 194-225 188-219 (460)
304 1wy6_A Hypothetical protein ST 53.4 53 0.0018 22.7 8.2 95 116-226 58-154 (172)
305 4aez_C MAD3, mitotic spindle c 52.8 48 0.0016 24.7 6.6 79 138-226 98-179 (223)
306 2ijq_A Hypothetical protein; s 52.0 28 0.00094 24.5 5.0 71 117-187 32-105 (161)
307 2br9_A 14-3-3E, 14-3-3 protein 52.0 73 0.0025 23.9 10.4 53 173-225 146-201 (234)
308 1om2_A Protein (mitochondrial 51.2 23 0.00077 22.5 4.0 27 161-187 24-50 (95)
309 3myv_A SUSD superfamily protei 49.9 39 0.0013 27.9 6.4 53 174-226 165-219 (454)
310 3eab_A Spastin; spastin, MIT, 49.6 14 0.00049 23.1 2.8 19 171-189 11-29 (89)
311 2o8p_A 14-3-3 domain containin 48.9 81 0.0028 23.5 9.2 58 170-227 138-198 (227)
312 3kez_A Putative sugar binding 48.6 40 0.0014 27.9 6.3 33 194-226 193-225 (461)
313 2ijq_A Hypothetical protein; s 47.8 69 0.0024 22.4 6.6 23 203-225 81-103 (161)
314 3ubw_A 14-3-3E, 14-3-3 protein 46.1 97 0.0033 23.6 10.4 54 173-226 172-228 (261)
315 3t5v_B Nuclear mRNA export pro 45.6 1.1E+02 0.0039 25.3 8.5 62 112-173 215-281 (455)
316 2dl1_A Spartin; SPG20, MIT, st 43.2 56 0.0019 21.5 5.0 14 133-146 19-32 (116)
317 1o9d_A 14-3-3-like protein C; 42.7 1.1E+02 0.0038 23.3 10.4 54 173-226 151-207 (260)
318 3uzd_A 14-3-3 protein gamma; s 41.9 1.1E+02 0.0038 23.1 10.5 53 173-225 147-202 (248)
319 3hdx_A SUSD homolog, SUSD supe 41.8 63 0.0021 26.8 6.5 33 194-226 194-226 (478)
320 2cwy_A Hypothetical protein TT 41.7 63 0.0022 20.2 6.1 62 163-228 7-70 (94)
321 1wy6_A Hypothetical protein ST 41.2 62 0.0021 22.4 5.1 34 152-185 120-153 (172)
322 2npm_A 14-3-3 domain containin 41.1 1.2E+02 0.004 23.2 9.9 53 173-226 172-227 (260)
323 2a9u_A Ubiquitin carboxyl-term 40.7 85 0.0029 21.5 5.9 42 116-157 41-82 (144)
324 3snx_A SUSD homolog, putative 38.9 49 0.0017 27.4 5.4 32 154-185 188-219 (460)
325 3lew_A SUSD-like carbohydrate 38.8 54 0.0019 27.4 5.7 33 154-186 200-232 (495)
326 2wpv_A GET4, UPF0363 protein Y 38.5 1.4E+02 0.0048 23.4 9.9 80 130-210 26-105 (312)
327 3mcx_A SUSD superfamily protei 38.3 48 0.0016 27.5 5.3 33 194-226 199-231 (477)
328 3myv_A SUSD superfamily protei 37.7 55 0.0019 27.0 5.5 34 154-187 187-220 (454)
329 3kez_A Putative sugar binding 36.6 57 0.002 27.0 5.5 34 154-187 193-226 (461)
330 3esl_A Checkpoint serine/threo 36.6 1.2E+02 0.0042 22.1 12.6 84 138-226 58-144 (202)
331 1qsa_A Protein (soluble lytic 36.1 46 0.0016 28.9 4.9 94 126-225 294-409 (618)
332 2xze_A STAM-binding protein; h 36.0 69 0.0024 22.0 4.9 29 199-227 42-70 (146)
333 3qnk_A Putative lipoprotein; a 34.1 89 0.003 26.3 6.3 31 195-225 180-210 (517)
334 3efz_A 14-3-3 protein; 14-3-3, 34.0 1.4E+02 0.0049 22.8 6.7 54 173-226 168-226 (268)
335 2ynq_A ESSB; membrane protein, 33.6 1.2E+02 0.004 21.3 5.7 16 124-139 15-30 (161)
336 2wb7_A PT26-6P; extra chromoso 33.6 1.9E+02 0.0066 24.4 7.8 17 134-150 449-465 (526)
337 2npm_A 14-3-3 domain containin 32.1 1.7E+02 0.0057 22.3 7.5 72 115-187 144-228 (260)
338 2e2a_A Protein (enzyme IIA); h 31.3 1.1E+02 0.0036 19.8 5.0 32 154-185 17-48 (105)
339 3r9m_A BRO1 domain-containing 31.3 2E+02 0.0069 23.0 7.8 32 157-188 253-284 (376)
340 3i4g_A SUSD-like carbohydrate 31.2 1.3E+02 0.0044 25.4 6.8 32 194-225 195-226 (528)
341 3jq1_A SUSD superfamily protei 30.8 54 0.0018 27.4 4.4 31 195-225 178-208 (481)
342 1wcr_A PTS system, N, N'-diace 30.1 1.1E+02 0.0038 19.6 5.0 32 154-185 15-46 (103)
343 3hdx_A SUSD homolog, SUSD supe 29.8 95 0.0032 25.7 5.7 32 155-186 195-226 (478)
344 2ymb_A MITD1, MIT domain-conta 29.7 11 0.00038 28.7 0.0 37 113-149 19-55 (257)
345 2oo2_A Hypothetical protein AF 28.4 45 0.0015 20.7 2.6 28 156-183 34-61 (86)
346 3iqu_A 14-3-3 protein sigma; s 27.6 1.9E+02 0.0066 21.6 10.2 53 173-225 149-204 (236)
347 4a1g_A Mitotic checkpoint seri 27.2 1.4E+02 0.0048 20.6 5.3 31 156-186 100-130 (152)
348 2a9u_A Ubiquitin carboxyl-term 26.8 1.4E+02 0.0047 20.5 5.1 29 156-184 41-69 (144)
349 2xze_A STAM-binding protein; h 26.7 1.1E+02 0.0039 20.8 4.8 33 116-148 39-71 (146)
350 3mcx_A SUSD superfamily protei 26.4 71 0.0024 26.5 4.4 33 154-186 199-231 (477)
351 3k1s_A PTS system, cellobiose- 26.2 1.4E+02 0.0047 19.4 5.0 33 154-186 19-51 (109)
352 2br9_A 14-3-3E, 14-3-3 protein 25.6 2.1E+02 0.0072 21.3 7.8 73 115-188 118-204 (234)
353 3esl_A Checkpoint serine/threo 25.3 2E+02 0.0068 21.0 9.8 71 112-187 75-145 (202)
354 3l8r_A PTCA, putative PTS syst 25.1 1.5E+02 0.0052 19.6 5.0 33 154-186 34-66 (120)
355 3qnk_A Putative lipoprotein; a 23.9 1.2E+02 0.0042 25.3 5.4 32 154-185 179-210 (517)
356 2cfu_A SDSA1; SDS-hydrolase, l 23.8 1.4E+02 0.0049 26.0 6.0 50 158-213 450-499 (658)
357 3o10_A Sacsin; all-helical dom 23.2 1.4E+02 0.0049 20.1 4.7 20 166-185 25-44 (141)
358 1zb1_A BRO1 protein; AIP1, BRO 23.2 2.9E+02 0.01 22.1 7.8 33 157-189 257-289 (392)
359 3jq1_A SUSD superfamily protei 22.6 74 0.0025 26.5 3.8 30 156-185 179-208 (481)
360 2wvi_A Mitotic checkpoint seri 22.4 1.5E+02 0.0052 20.7 4.8 66 112-187 61-126 (164)
361 3i4g_A SUSD-like carbohydrate 22.2 1.4E+02 0.005 25.1 5.5 32 155-186 196-227 (528)
362 4aez_C MAD3, mitotic spindle c 21.5 1.5E+02 0.0051 22.0 4.8 32 156-187 149-180 (223)
363 3efz_A 14-3-3 protein; 14-3-3, 21.4 2.8E+02 0.0095 21.2 7.0 71 115-186 140-226 (268)
364 3ubw_A 14-3-3E, 14-3-3 protein 20.4 2.9E+02 0.0099 21.0 9.0 73 114-187 143-229 (261)
365 2o8p_A 14-3-3 domain containin 20.4 2.7E+02 0.0092 20.7 10.9 72 116-187 119-198 (227)
366 3s6n_M SurviVal motor neuron p 20.2 83 0.0028 15.8 2.1 13 213-225 18-30 (37)
367 1o9d_A 14-3-3-like protein C; 20.1 2.9E+02 0.01 21.0 7.8 72 115-187 123-208 (260)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.75 E-value=3.5e-17 Score=114.56 Aligned_cols=104 Identities=15% Similarity=0.258 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
+..+.++.++|..|+..|+|++|+.+|++++++.+. ...++.++|.++..+|++++|+.+|++++++.
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------ 77 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE------NAILYSNRAACLTKLMEFQRALDDCDTCIRLD------ 77 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh------
Confidence 346678889999999999999999999999997655 67899999999999999999999999999985
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
|..+.+|+++|.+|..+|++++|+.+|++++++.++
T Consensus 78 p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~ 113 (126)
T 4gco_A 78 SKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPS 113 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcC
Confidence 778899999999999999999999999999998654
No 2
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.74 E-value=5e-17 Score=117.35 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
....+++.+|..++..|++++|+.+|++++++.+. .+.++.++|.++...|+|++|+++|++++.+. |
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~------~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~------P 101 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY------NVDYIMGLAAIYQIKEQFQQAADLYAVAFALG------K 101 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------S
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC------C
Confidence 37778999999999999999999999999997665 67899999999999999999999999999996 7
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+.+|+++|.+|..+|++++|+.+|++++++.+
T Consensus 102 ~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~ 135 (151)
T 3gyz_A 102 NDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSN 135 (151)
T ss_dssp SCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 7889999999999999999999999999998764
No 3
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.73 E-value=1.4e-16 Score=111.50 Aligned_cols=108 Identities=16% Similarity=0.334 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-c
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE-Y 193 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~-~ 193 (230)
..+.++.++|..++..|+|++|+.+|++++++.+. ...++.++|.++..+|+|++|+++|++++++.+.... .
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS------NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh
Confidence 45667889999999999999999999999997665 5788999999999999999999999999999866443 3
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+..+.+|.++|.++..+|++++|+.+|++++...+
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 34567999999999999999999999999998643
No 4
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.73 E-value=7.7e-16 Score=110.29 Aligned_cols=141 Identities=23% Similarity=0.288 Sum_probs=124.0
Q ss_pred HHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q 026948 79 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK 158 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 158 (230)
...+.+.++..+.+++...+. .++....+.++..+|.++...|++++|+.++++++++.+..++......
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 90 (164)
T 3ro3_A 21 LLGNFRDAVIAHEQRLLIAKE----------FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 90 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHH----------hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 334566677777777777665 2445556678889999999999999999999999999999889888899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++.++|.++...|++++|++++++++++.+..++.+....++.++|.++...|++++|..++++++++.++
T Consensus 91 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 91 SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888887888899999999999999999999999999998753
No 5
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.72 E-value=2.7e-16 Score=113.28 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-H
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV------KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI-S 187 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~------~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~-~ 187 (230)
..+..+..+|..++..|+|++|+..|++++++.+.. ...+....++.++|.++..+|+|++|+.+|++++++ .
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 356678899999999999999999999999999874 223345669999999999999999999999999998 2
Q ss_pred HHhCCcccHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhhhcC
Q 026948 188 EREGEYSGSTEAY----GAIADCYTELGDLERAARFYDKYISRLESD 230 (230)
Q Consensus 188 ~~~~~~~~~~~~~----~~lg~~y~~~g~~~~A~~~~~~al~~~~~~ 230 (230)
+...-.|+...+| +++|.++..+|++++|+.+|++++++.++|
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 2222237888999 999999999999999999999999987654
No 6
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.71 E-value=9.4e-16 Score=122.09 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=118.2
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc-CChHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KDPIEEKKAA 160 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-~~~~~~~~~~ 160 (230)
..+.++..+.+++..... ..+....+.++..+|.+|...|++++|+.+|+++++..+.. .+......++
T Consensus 130 ~~~~Ai~~~~~al~~~~~----------~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLT----------GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp CHHHHHHHHHHHHHTCCC----------CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcc----------cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 346666667777765443 13334566678999999999999999999999999999887 6777788899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 228 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~~~ 228 (230)
+++|.+|..+|+|++|++++++++++.++.++....+.+++++|.+|..+| ++++|+.+|++|+.+++
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888888999999999999999 57999999999999875
No 7
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.71 E-value=9.4e-16 Score=122.20 Aligned_cols=143 Identities=15% Similarity=0.108 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHH
Q 026948 76 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 155 (230)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 155 (230)
......+.+.++..|.+++...+. .++....+.++.++|.+|..+|++++|+.+|++++++.+..++...
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~ 115 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQKK----------AGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRR 115 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 333344678888888888888765 3555566778999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQ-GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~-~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.+.++.++|.+|... |++++|+.+|++++++.+..++......++.++|.++..+|+|++|+.+|++++++.+
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 899999999999996 9999999999999999877665555578899999999999999999999999998754
No 8
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.70 E-value=1.7e-15 Score=124.74 Aligned_cols=137 Identities=13% Similarity=0.117 Sum_probs=107.1
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC-hHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKA 159 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~-~~~~~~~ 159 (230)
.+.+.++..+.+++..... .+++...+.++..+|.+|...|++++|+.++.+++++.+..++ .+..+.+
T Consensus 117 g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 186 (383)
T 3ulq_A 117 REYLSAIKFFKKAESKLIF----------VKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQC 186 (383)
T ss_dssp TCHHHHHHHHHHHHTTGGG----------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHhh----------CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHH
Confidence 3556677777777766554 3455556777888888888888888888888888888887766 6667778
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 160 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 160 ~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
+.++|.++...|+|++|+++|++++++.++.++.+..+.++.++|.+|..+|++++|+.+|++++++.
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 254 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVF 254 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 88888888888888888888888888887777777777788888888888888888888888888764
No 9
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.70 E-value=2.8e-15 Score=123.46 Aligned_cols=149 Identities=17% Similarity=0.204 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCc-cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
+...+.......+.+.++..+.+++...+. .++ ....+.++..+|.+|...|++++|+.++.+++++.+
T Consensus 146 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 146 FFKMSESYYYMKQTYFSMDYARQAYEIYKE----------HEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHT----------CSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----------CccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 333344444444678888888888888776 233 556677889999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..++......++.++|.++..+|++++|+++|++++++.++..+.+..+.++.++|.+|..+|++++|+.++++++++.+
T Consensus 216 ~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 216 AEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988887677899999999999999999999999999998764
No 10
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.69 E-value=2.3e-16 Score=113.65 Aligned_cols=120 Identities=12% Similarity=0.108 Sum_probs=102.8
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
..+.++..+++++...|. ....++.+|.+|+..|+|++|+.+|++++++.++ ...++.
T Consensus 12 ~~e~ai~~~~~a~~~~p~----------------~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~------~~~a~~ 69 (150)
T 4ga2_A 12 DVERYIASVQGSTPSPRQ----------------KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER------DPKAHR 69 (150)
T ss_dssp HHHHHHHHHHHHSCSHHH----------------HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred hHHHHHHHHHHhcccCcc----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 445566666666655544 5567889999999999999999999999997665 678999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF-YDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~-~~~al~~~~~ 229 (230)
++|.++...|++++|+.+|++++++. |..+.++.++|.+|...|++++|... +++++++.+.
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~ 132 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVELN------PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPG 132 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC
Confidence 99999999999999999999999996 77899999999999999999887765 5999987654
No 11
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.68 E-value=2.9e-15 Score=119.24 Aligned_cols=136 Identities=17% Similarity=0.114 Sum_probs=113.0
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHH-HHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE-KKAAR 161 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~-~~~~~ 161 (230)
.+.++..+.+++...+. ..+....+.+++.+|.+|...|++++|+.+|++++++.+..++.... ..+++
T Consensus 131 ~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~ 200 (293)
T 2qfc_A 131 YEYCILELKKLLNQQLT----------GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRY 200 (293)
T ss_dssp HHHHHHHHHHHHTTCCC----------SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----------CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHH
Confidence 44555555555554443 13333456688999999999999999999999999998877655543 38999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhhh
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERA-ARFYDKYISRLE 228 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A-~~~~~~al~~~~ 228 (230)
++|.+|..+|+|++|++++++++++....++....+.+++++|.+|..+|++++| ..+|++|+.+++
T Consensus 201 nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 201 NHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999877777777899999999999999999999 888999998774
No 12
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.68 E-value=3.2e-15 Score=123.04 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=110.6
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKAA 160 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~-~~~~~~~~ 160 (230)
+.+.++..+.+++..... .+++...+.+++.+|.+|...|++++|+.++.+++++.+..++ ....+.++
T Consensus 116 ~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 185 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPF----------VSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSL 185 (378)
T ss_dssp CHHHHHHHHHHHHTTGGG----------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh----------CCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 456677777777766654 3455667778888888888889999999999888888887765 55678888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.++|.++...|+|++|+++|++++++.++.++.+..+.++.++|.+|..+|++++|+.+|++++++.+
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88888888888999999999888888887777777788888888888888888888888888888553
No 13
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.67 E-value=8.9e-15 Score=109.27 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=122.5
Q ss_pred HHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC-hHHH
Q 026948 78 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEE 156 (230)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~-~~~~ 156 (230)
....+.+.++..+.+++..... .++....+.++..+|.++...|++++|+.++.+++++.+..++ ....
T Consensus 37 ~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 106 (203)
T 3gw4_A 37 AFMDRFDEARASFQALQQQAQK----------SGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAA 106 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHhCcHHHHHHHHHHHHHHHHH----------cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHH
Confidence 3334566677777777777665 3556667788999999999999999999999999999998884 4478
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..++.++|.++...|++++|+.++++++++.+..++......++.++|.++...|++++|..++++++++.+
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999888887777788899999999999999999999999999875
No 14
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.67 E-value=2.3e-15 Score=120.76 Aligned_cols=114 Identities=16% Similarity=0.073 Sum_probs=68.6
Q ss_pred cCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026948 110 VDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER 189 (230)
Q Consensus 110 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~ 189 (230)
.++....+.++.++|.+|.. |++++|+.+|++++++.+..++......++.++|.++..+|+|++|+.+|++++.+...
T Consensus 109 ~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 109 NGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34444445555566666665 66666666666666666665555555566666666666666666666666666666655
Q ss_pred hCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 190 EGEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 224 (230)
Q Consensus 190 ~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 224 (230)
.+..+....++.++|.++..+|++++|+.+|++++
T Consensus 188 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 188 MENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 55444444456666666666666666666666665
No 15
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=9.7e-16 Score=136.08 Aligned_cols=133 Identities=14% Similarity=0.195 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 68 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
+.+++.+..+...++.++++..|++++...|. ...+++++|.+|..+|++++|+.+|++++++.
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~----------------~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~ 73 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPE----------------FAAAHSNLASVLQQQGKLQEALMHYKEAIRIS 73 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44555555666666777777777777777665 34567777777777777777777777777765
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
+. ...+++++|.++..+|++++|+++|++++++. |..+.+|.++|.+|..+|++++|+.+|++++++.
T Consensus 74 P~------~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~------P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~ 141 (723)
T 4gyw_A 74 PT------FADAYSNMGNTLKEMQDVQGALQCYTRAIQIN------PAFADAHSNLASIHKDSGNIPEAIASYRTALKLK 141 (723)
T ss_dssp TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 44 56677777777777777777777777777774 6667777777777777777777777777777754
Q ss_pred h
Q 026948 228 E 228 (230)
Q Consensus 228 ~ 228 (230)
+
T Consensus 142 P 142 (723)
T 4gyw_A 142 P 142 (723)
T ss_dssp S
T ss_pred C
Confidence 3
No 16
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.66 E-value=1.1e-14 Score=119.82 Aligned_cols=146 Identities=13% Similarity=0.120 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCc-cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc
Q 026948 72 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 150 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 150 (230)
..+.......+...++..+.+++...+. .++ ....+.++..+|.+|...|++++|+.+|.+++++.+..
T Consensus 146 ~lg~~y~~~~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 215 (378)
T 3q15_A 146 KVAEAYYHMKQTHVSMYHILQALDIYQN----------HPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI 215 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHT----------STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHh----------CCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Confidence 3333344444677888888888887765 122 34567788899999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
++......++.++|.++..+|++++|+++|++++++.+...++. .+.++.++|.+|..+|++++|+.++++++++.+
T Consensus 216 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 216 QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL-LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99998999999999999999999999999999999988776644 489999999999999999999999999999764
No 17
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.65 E-value=2.3e-15 Score=108.12 Aligned_cols=102 Identities=22% Similarity=0.155 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
.....++.+|..++..|++++|+..|.+++.+.+. ...+++++|.++...|++++|+.+|++++.+. |
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~------p 86 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY------DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD------I 86 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------T
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC------C
Confidence 36778899999999999999999999999997655 67888999999999999999999999999986 7
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+.+++++|.+|..+|++++|+.+|++++++.+
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 7788999999999999999999999999998764
No 18
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.65 E-value=1.4e-14 Score=103.66 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=109.0
Q ss_pred CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 026948 111 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 111 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~ 190 (230)
++....+.++..+|.++...|++++|+.++.+++++.+..++......++.++|.++...|++++|++++++++++.+..
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 45566777899999999999999999999999999999988888888999999999999999999999999999999888
Q ss_pred CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 191 GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 191 ~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
++.+....++.++|.++...|++++|+.++++++++.+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 88777888999999999999999999999999998754
No 19
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.64 E-value=1.2e-14 Score=115.77 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Q 026948 67 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL 146 (230)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l 146 (230)
...+...+.......+.+.++..+.+.+...+. ...........+.+|..+...|++++|+.++++++++
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 144 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY----------HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQ 144 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC----------ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 344555555555555677777777777765543 1222234445668999999999999999999999988
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 147 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-EAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 147 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~-~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
.....+......+++++|.+|...|+|++|+.+|++++++.+..++.+... .+++++|.+|..+|+|++|+.+++++++
T Consensus 145 ~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 145 QLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp CCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 776666666788999999999999999999999999999887766544333 7999999999999999999999999998
Q ss_pred hhh
Q 026948 226 RLE 228 (230)
Q Consensus 226 ~~~ 228 (230)
+.+
T Consensus 225 ~~~ 227 (293)
T 2qfc_A 225 ISC 227 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 20
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.63 E-value=6.7e-15 Score=107.06 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=96.6
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG 191 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~ 191 (230)
.+...+..++.+|.+++..|++++|+.+|++++++.+. ...++.++|.++...|+|++|+.+|++++++.
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---- 75 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA------NPIYLSNRAAAYSASGQHEKAAEDAELATVVD---- 75 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----
Confidence 34457778999999999999999999999999997665 57889999999999999999999999999995
Q ss_pred CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 192 EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 192 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
|....+|+++|.+|..+|++++|+.+|++++++.+.
T Consensus 76 --p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 76 --PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN 111 (164)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS
T ss_pred --CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 777899999999999999999999999999987654
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.63 E-value=5.4e-15 Score=105.17 Aligned_cols=103 Identities=22% Similarity=0.209 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
......++.+|..++..|++++|+..|++++...+. ...++.++|.++...|+|++|+.+|++++.+.
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------ 82 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY------DARYFLGLGACRQSLGLYEQALQSYSYGALMD------ 82 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC------
Confidence 336678889999999999999999999999996554 67889999999999999999999999999986
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|..+.+++++|.+|..+|++++|+.+|++++++.+
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 77788999999999999999999999999998765
No 22
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.63 E-value=7.2e-15 Score=102.07 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+..+..+|..++..|++++|+.+|++++++.+. ...++.++|.++...|++++|+.+|++++++. |.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~ 70 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD------PN 70 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CC
Confidence 4557889999999999999999999999997655 57889999999999999999999999999985 77
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
...+++++|.++..+|++++|+.+|++++++.
T Consensus 71 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 71 FVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 78999999999999999999999999999886
No 23
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.63 E-value=6e-15 Score=107.12 Aligned_cols=109 Identities=14% Similarity=0.112 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC------------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD------------PIEEKKAARGLGASLQRQGKYREAIKYHSM 182 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~------------~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~ 182 (230)
..+..+..+|..++..|+|++|+..|.+++.+.+.... .+....++.++|.++...|+|++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 46668889999999999999999999999998544211 444678899999999999999999999999
Q ss_pred HHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 183 VLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 183 al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++.+. |..+.+|+++|.+|..+|++++|+.+|++++.+.+.
T Consensus 89 al~~~------p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 89 VLKRE------ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHHS------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHhcC------CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 99995 778999999999999999999999999999988654
No 24
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.63 E-value=2e-14 Score=115.27 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 153 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 153 (230)
+.......+.+.++..|.+++...+. .++....+.++.++|.+|..+|++++|+.+|++++++....++.
T Consensus 43 ~~~~~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~ 112 (307)
T 2ifu_A 43 AVAFKNAKQLEQAKDAYLQEAEAHAN----------NRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP 112 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH
Confidence 44444555666677777777777776 46667788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.....++.++|.+|.. |++++|+.+|++++++.+..++......++.++|.+|..+|+|++|+.+|++++.+.+
T Consensus 113 ~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 113 DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9899999999999999 9999999999999999999999999999999999999999999999999999999764
No 25
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.62 E-value=1.5e-14 Score=115.21 Aligned_cols=150 Identities=14% Similarity=0.050 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-QDLEKAFTEFKAALELA 147 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-g~~~~A~~~~~~al~l~ 147 (230)
.+.+.+..+...++.+.++..|.+++...+. .++....+.++.++|.+|... |++++|+.+|++++++.
T Consensus 79 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~----------~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~ 148 (292)
T 1qqe_A 79 TYVEAYKCFKSGGNSVNAVDSLENAIQIFTH----------RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWY 148 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 3444444444545778888999999988876 355556677888999999996 99999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS-GSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~-~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+..++......++.++|.++..+|+|++|+.+|++++++........ ....++.++|.++..+|++++|+.+|++++++
T Consensus 149 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 149 AQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred HhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 98777777788899999999999999999999999998864332221 33457899999999999999999999999875
Q ss_pred hh
Q 026948 227 LE 228 (230)
Q Consensus 227 ~~ 228 (230)
.+
T Consensus 229 ~p 230 (292)
T 1qqe_A 229 DP 230 (292)
T ss_dssp --
T ss_pred CC
Confidence 43
No 26
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.62 E-value=2.2e-14 Score=114.13 Aligned_cols=151 Identities=13% Similarity=0.056 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 67 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEE-LLSRLKTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
...+.+.+.......+.+.++..+.+.+...+. .+.... ...+..+|..+...+++++|+.+++++++
T Consensus 75 ~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~ 143 (293)
T 3u3w_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-----------HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLN 143 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCC-----------CHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHhccccC-----------ChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 344555555555555677777777777764433 222222 33444689999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 146 LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE-GEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 224 (230)
Q Consensus 146 l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 224 (230)
+....++......++.++|.+|...|+|++|+.+|+++++..++. .+.+..+.+++++|.+|..+|+|++|+.++++++
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 144 QQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp TCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 776666666677889999999999999999999999999988877 5566778899999999999999999999999999
Q ss_pred Hhhh
Q 026948 225 SRLE 228 (230)
Q Consensus 225 ~~~~ 228 (230)
++.+
T Consensus 224 ~~~~ 227 (293)
T 3u3w_A 224 EISC 227 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 27
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.60 E-value=1.5e-14 Score=110.25 Aligned_cols=95 Identities=11% Similarity=0.021 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQ-----------GKYREAIKYHSMVLQIS 187 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~-----------~~~~~Ai~~~~~al~~~ 187 (230)
++..+|.++...|++++|+..+++++++.+. ...++.++|.++... |++++|+..|++++++.
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~ 114 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPR------YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVN 114 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhC
Confidence 4555555555555555555555555554333 334444555555555 55555555555554443
Q ss_pred HHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 188 EREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 188 ~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
|....++.++|.++..+|++++|+..|+++++
T Consensus 115 ------P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 146 (217)
T 2pl2_A 115 ------PRYAPLHLQRGLVYALLGERDKAEASLKQALA 146 (217)
T ss_dssp ------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHHcCChHHHHHHHHHHHh
Confidence 33444444555555555555555555554444
No 28
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.59 E-value=1.8e-14 Score=109.15 Aligned_cols=132 Identities=14% Similarity=0.169 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHH----------------HHHHHHhCCC
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLK----------------TGKNFLRNQD 132 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~g~~~~~~g~ 132 (230)
.+..++......++.+.++..+.+++...|. ...+++. +|.+|...|+
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 69 (208)
T 3urz_A 6 EMLQKVSAAIEAGQNGQAVSYFRQTIALNID----------------RTEMYYWTNVDKNSEISSKLATELALAYKKNRN 69 (208)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH----------------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC----------------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCC
Confidence 3444455555556677777777777776654 3334444 9999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH-----
Q 026948 133 LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY----- 207 (230)
Q Consensus 133 ~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y----- 207 (230)
+++|+..|++++++.+. ...++.++|.++...|++++|+.+|++++++. |..+.+++++|.+|
T Consensus 70 ~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 70 YDKAYLFYKELLQKAPN------NVDCLEACAEMQVCRGQEKDALRMYEKILQLE------ADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHHHHHHhH
Confidence 99999999999997665 67889999999999999999999999999885 55566666666555
Q ss_pred ------------------------------HHcCCHHHHHHHHHHHHHhhh
Q 026948 208 ------------------------------TELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 208 ------------------------------~~~g~~~~A~~~~~~al~~~~ 228 (230)
...|+|++|+.+|++++++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 138 QEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 344678899999999988765
No 29
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.9e-13 Score=112.16 Aligned_cols=143 Identities=22% Similarity=0.267 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHH
Q 026948 76 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 155 (230)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 155 (230)
......+.+.++..+.+++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++...
T Consensus 196 ~~~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 196 THYLLGNFRDAVIAHEQRLLIAKE----------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHTBHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHh----------cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 333334667777788888877665 3445556678889999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++...|++++|+.++++++++....++.+....++..+|.+|..+|++++|+.+|++++++.+
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 338 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999988888788889999999999999999999999999998754
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.58 E-value=4.8e-14 Score=104.07 Aligned_cols=100 Identities=20% Similarity=0.248 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
..++..+|.++...++++.|...+.+++.+.+. ...++..+|.++...|++++|+++|++++++. |..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~------~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~------p~~ 140 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALNTV------YADAYYKLGLVYDSMGEHDKAIEAYEKTISIK------PGF 140 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc------chHHHHHHHHHHHHhCCchhHHHHHHHHHHhc------chh
Confidence 345667788888888888888888888876544 56788999999999999999999999999985 778
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 197 TEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+.++.++|.+|..+|++++|+.+|++++++.+
T Consensus 141 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 172 (184)
T 3vtx_A 141 IRAYQSIGLAYEGKGLRDEAVKYFKKALEKEE 172 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCc
Confidence 89999999999999999999999999998765
No 31
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.58 E-value=1.5e-13 Score=102.49 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc-
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS- 194 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~- 194 (230)
.+.++..+|.++...|++++|+.++++++.+....++.+....++.++|.++...|++++|++++++++.+.+..++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 5668889999999999999999999999999999999999999999999999999999999999999999998877544
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
....++.++|.++..+|++++|..++++++++.+
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999998754
No 32
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.57 E-value=2.3e-13 Score=108.35 Aligned_cols=139 Identities=23% Similarity=0.286 Sum_probs=121.1
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.+.++..+.+++...+. .++....+.++..+|.++...|++++|+.++++++++.+..++......++
T Consensus 197 ~~~~~A~~~~~~a~~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 266 (338)
T 3ro2_A 197 GNFRDAVIAHEQRLLIAKE----------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSC 266 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHH
Confidence 3566777777777776655 244555667888999999999999999999999999999988888889999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
..+|.++...|++++|+.++++++.+....++.+....++..+|.+|...|++++|..++++++++.++
T Consensus 267 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 267 YSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999888887788889999999999999999999999999988753
No 33
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=5.3e-14 Score=106.08 Aligned_cols=133 Identities=13% Similarity=0.004 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc
Q 026948 71 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 150 (230)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 150 (230)
...+.......+.+.++..+.+++.. ...+++.+|.+|...|++++|+.+|++++++.+.
T Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~a~~~-------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~- 69 (213)
T 1hh8_A 10 WNEGVLAADKKDWKGALDAFSAVQDP-------------------HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH- 69 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSSSC-------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHcCC-------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-
Confidence 33344444444566666666666411 1347889999999999999999999999997544
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----------CcccHHHHHHHHHHHHHHcCCHHHHHHHH
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG----------EYSGSTEAYGAIADCYTELGDLERAARFY 220 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~----------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~ 220 (230)
...+++++|.++...|++++|+.+|+++++...... ..+....+++++|.+|..+|++++|+.+|
T Consensus 70 -----~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 144 (213)
T 1hh8_A 70 -----LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQL 144 (213)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred -----chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHH
Confidence 568899999999999999999999999998764433 34567799999999999999999999999
Q ss_pred HHHHHhhh
Q 026948 221 DKYISRLE 228 (230)
Q Consensus 221 ~~al~~~~ 228 (230)
++++++.+
T Consensus 145 ~~al~~~p 152 (213)
T 1hh8_A 145 ALATSMKS 152 (213)
T ss_dssp HHHHTTCC
T ss_pred HHHHHcCc
Confidence 99998754
No 34
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.57 E-value=2.4e-13 Score=112.28 Aligned_cols=137 Identities=22% Similarity=0.300 Sum_probs=121.3
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ..+....+.++..+|.+|...|++++|+.++++++.+.+..++......++.
T Consensus 238 ~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 307 (411)
T 4a1s_A 238 DFQAAIEHHQERLRIARE----------FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCY 307 (411)
T ss_dssp CHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----------cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 556677777777776654 2444556668889999999999999999999999999999888888899999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.+|.++...|++++|+.++++++.+....++.+....++..+|.+|..+|++++|..+|++++++.+
T Consensus 308 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 374 (411)
T 4a1s_A 308 SLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAX 374 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988888788888999999999999999999999999999764
No 35
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.57 E-value=2.9e-13 Score=105.48 Aligned_cols=152 Identities=17% Similarity=0.161 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+...+.......+.+.++..+.+++...... ...+......++..+|.+|...|++++|+.++.+++.+.+
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 116 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 116 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH--------cCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34444444444456777777777777665320 0023445677889999999999999999999999999887
Q ss_pred hc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 149 NV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 224 (230)
Q Consensus 149 ~~--~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 224 (230)
.. .+.+....++.++|.++...|++++|++++++++++.+.. ++.+....++.++|.+|..+|++++|+.++++++
T Consensus 117 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 117 KVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 64 3457788999999999999999999999999999996665 3456778899999999999999999999999999
Q ss_pred Hhhh
Q 026948 225 SRLE 228 (230)
Q Consensus 225 ~~~~ 228 (230)
++.+
T Consensus 197 ~~~~ 200 (283)
T 3edt_B 197 TRAH 200 (283)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8743
No 36
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.57 E-value=4.9e-14 Score=107.68 Aligned_cols=132 Identities=15% Similarity=0.145 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcccc-ccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAP-VGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
.+...+.......+.+.++..|.+++...+ . ....++.+|.++...|++++|+.++++++++.
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ----------------DSVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccCCC----------------CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 344556666666678888888998888776 3 22467779999999999999999999999854
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHH-------HHHHHHHHHHHHcCCHHHHHHHH
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-------EAYGAIADCYTELGDLERAARFY 220 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~-------~~~~~lg~~y~~~g~~~~A~~~~ 220 (230)
+. ...++..+|.++...|++++|+.+|++++++. |... .++.++|.++...|++++|+.+|
T Consensus 73 p~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 140 (228)
T 4i17_A 73 YN------LANAYIGKSAAYRDMKNNQEYIATLTEGIKAV------PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENY 140 (228)
T ss_dssp CS------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cc------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHH
Confidence 44 78899999999999999999999999999886 4444 67999999999999999999999
Q ss_pred HHHHHhhh
Q 026948 221 DKYISRLE 228 (230)
Q Consensus 221 ~~al~~~~ 228 (230)
++++++.+
T Consensus 141 ~~al~~~p 148 (228)
T 4i17_A 141 KHATDVTS 148 (228)
T ss_dssp HHHTTSSC
T ss_pred HHHHhcCC
Confidence 99997643
No 37
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.56 E-value=5e-13 Score=109.71 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=121.1
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 162 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~ 162 (230)
.+.++..+.+++..... .++....+.++..+|.+|...|++++|+.++++++++.+..++......++.+
T Consensus 163 ~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 232 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTA----------LGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSN 232 (406)
T ss_dssp HHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----------ccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 66777777777766554 34555667788899999999999999999999999999998888888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+|.++...|++++|+.++++++.+....++.+....++.++|.+|...|++++|+.+|++++++.+
T Consensus 233 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 233 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887777789999999999999999999999999998754
No 38
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.56 E-value=5.6e-13 Score=110.11 Aligned_cols=136 Identities=17% Similarity=0.249 Sum_probs=119.6
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 162 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~ 162 (230)
.+.++..+.+++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++......++.+
T Consensus 199 ~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 268 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRD----------LGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSN 268 (411)
T ss_dssp HHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 66666667776666544 24445567788899999999999999999999999999998888888899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+|.++...|++++|+.+|++++.+....++......++..+|.+|...|++++|+.++++++.+.+
T Consensus 269 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 269 LGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988777777789999999999999999999999999998754
No 39
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.55 E-value=3.4e-14 Score=126.22 Aligned_cols=132 Identities=17% Similarity=0.213 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+.+.+..+...++.++++..|++++...|. .+.+++++|.++..+|++++|+.+|++++++.+
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~----------------~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P 108 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRISPT----------------FADAYSNMGNTLKEMQDVQGALQCYTRAIQINP 108 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3445555566666888999999999988776 456899999999999999999999999999766
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
. ...++.++|.++..+|++++|+++|++++++. |....++.++|.++..+|++++|.+.|++++++..
T Consensus 109 ~------~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~------P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~ 176 (723)
T 4gyw_A 109 A------FADAHSNLASIHKDSGNIPEAIASYRTALKLK------PDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVA 176 (723)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred C------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhCh
Confidence 5 67899999999999999999999999999996 88899999999999999999999999999998764
No 40
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.55 E-value=8e-13 Score=105.21 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=119.3
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 162 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~ 162 (230)
.+.++..+.+++..... .++......++..+|.++...|++++|+.++++++++.+..++......++.+
T Consensus 159 ~~~A~~~~~~a~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 228 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA----------LGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSN 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----------cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 56666666666665544 24455567788899999999999999999999999999998888888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+|.++...|++++|+.++++++.+....++.+....++..+|.++...|++++|..++++++++.+
T Consensus 229 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 229 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877777789999999999999999999999999998754
No 41
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.54 E-value=7.6e-14 Score=106.35 Aligned_cols=128 Identities=17% Similarity=0.141 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC-----------CCHHHHHHHHH
Q 026948 73 QLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-----------QDLEKAFTEFK 141 (230)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------g~~~~A~~~~~ 141 (230)
.+.......+.+.++..+.+++...|. ...++..+|.++... |++++|+..++
T Consensus 45 lg~~~~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~ 108 (217)
T 2pl2_A 45 LARTQLKLGLVNPALENGKTLVARTPR----------------YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLK 108 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHH
Confidence 334444445677788888888887776 455788899999999 99999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 142 AALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 142 ~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
+++++.+. ...++.++|.++...|++++|+..|++++++. ..+.++.++|.+|..+|++++|+..|+
T Consensus 109 ~al~~~P~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------~~~~~~~~la~~~~~~g~~~~A~~~~~ 175 (217)
T 2pl2_A 109 DAERVNPR------YAPLHLQRGLVYALLGERDKAEASLKQALALE-------DTPEIRSALAELYLSMGRLDEALAQYA 175 (217)
T ss_dssp HHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHhCcc------cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-------cchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99997655 66788999999999999999999999998883 356789999999999999999999999
Q ss_pred HHHHhhhc
Q 026948 222 KYISRLES 229 (230)
Q Consensus 222 ~al~~~~~ 229 (230)
++++..+.
T Consensus 176 ~al~~~P~ 183 (217)
T 2pl2_A 176 KALEQAPK 183 (217)
T ss_dssp HHHHHSTT
T ss_pred HHHHhCCC
Confidence 99987653
No 42
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.54 E-value=1.4e-13 Score=96.46 Aligned_cols=102 Identities=11% Similarity=0.069 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+..+..+|..++..|++++|+.+|.+++.+.+. ...++.++|.++...|++++|+.++++++.+. |.
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------p~ 75 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL------VAVYYTNRALCYLKMQQPEQALADCRRALELD------GQ 75 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------ch
Confidence 3557889999999999999999999999997655 56789999999999999999999999999985 67
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...+++++|.++..+|++++|+.+|++++.+.++
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 76 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 7899999999999999999999999999987654
No 43
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.54 E-value=5.1e-14 Score=97.56 Aligned_cols=99 Identities=17% Similarity=0.148 Sum_probs=88.9
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
.++.+|..+...|++++|+..++++++..+. ...+++.+|.++...|++++|+.+|++++++. |....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~~~~ 86 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE------REEAWRSLGLTQAENEKDGLAIIALNHARMLD------PKDIA 86 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHH
Confidence 4678899999999999999999999997665 67899999999999999999999999999996 77889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++.++|.+|...|++++|+.+|+++++..+.
T Consensus 87 ~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 87 VHAALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999987643
No 44
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.54 E-value=2.2e-13 Score=100.48 Aligned_cols=131 Identities=19% Similarity=0.200 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc
Q 026948 71 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 150 (230)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 150 (230)
.+.+......++.+.++..|++++...|. ...++..+|.+|...|++++|+..+.+++...+.
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~- 71 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPN----------------NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT- 71 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-
Confidence 34455556666888899999999988776 4567899999999999999999999999986554
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...++..+|.++...+++++|++.+++++.+. |....++..+|.+|..+|++++|+.+|++++++.+.
T Consensus 72 -----~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 72 -----SAEAYYILGSANFMIDEKQAAIDALQRAIALN------TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred -----hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 56788999999999999999999999999885 777899999999999999999999999999987653
No 45
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.53 E-value=5.2e-13 Score=105.67 Aligned_cols=146 Identities=14% Similarity=0.141 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--C
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--K 151 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~ 151 (230)
+.......+.+.++..+.+++...... ...+......++..+|.+|...|++++|+.++++++.+.+.. +
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~~~--------~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 105 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLEKT--------SGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGK 105 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHH--------HCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHH--------cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 333444445566666666666654320 001334466788899999999999999999999999998776 6
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 152 DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 152 ~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
+.+....++.++|.++...|++++|+++|++++++.+.. ++.+....++.++|.++...|++++|+.+|++++++.
T Consensus 106 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 183 (311)
T 3nf1_A 106 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 183 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 677789999999999999999999999999999998776 6667788999999999999999999999999999874
No 46
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.52 E-value=3.8e-13 Score=104.82 Aligned_cols=114 Identities=16% Similarity=0.169 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE- 190 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~- 190 (230)
...+.++..+|.+|...|++++|+.++++++++.... ++.+....++.++|.++...|++++|+++|++++++.++.
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 4567788899999999999999999999999998776 6778889999999999999999999999999999997765
Q ss_pred -CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 191 -GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 191 -~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
++.+....++.++|.+|...|++++|+.+|++++++.
T Consensus 120 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 120 GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3447788999999999999999999999999999873
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.52 E-value=1.8e-13 Score=95.52 Aligned_cols=116 Identities=12% Similarity=0.141 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 026948 64 RGELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAA 143 (230)
Q Consensus 64 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~a 143 (230)
+...+.+.+.+......++++.++..|.+++...|. ...++.++|.+|..+|++++|+..++++
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE----------------NAILYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHhhHHHhhccHHHHHHHHHHH
Confidence 334456777788888888999999999999988876 4568889999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q 026948 144 LELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 207 (230)
Q Consensus 144 l~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 207 (230)
+++.+. ...+++++|.++..+|++++|+++|++++++. |....++.+++.++
T Consensus 74 l~~~p~------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~------P~~~~a~~~l~~~l 125 (126)
T 4gco_A 74 IRLDSK------FIKGYIRKAACLVAMREWSKAQRAYEDALQVD------PSNEEAREGVRNCL 125 (126)
T ss_dssp HHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHC
T ss_pred HHhhhh------hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC------cCCHHHHHHHHHhc
Confidence 997655 67889999999999999999999999999996 88889999998874
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.51 E-value=2.3e-14 Score=103.08 Aligned_cols=96 Identities=13% Similarity=0.145 Sum_probs=84.1
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHH
Q 026948 122 KTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYG 201 (230)
Q Consensus 122 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~ 201 (230)
.+|.++...|++++|+..+++++. ..+.....++++|.+|...|+|++|+++|++++++. |..+.+|.
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~------p~~~~a~~ 69 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTP------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ------ERDPKAHR 69 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSC------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcc------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHH
Confidence 368888999999999999999988 445588889999999999999999999999999996 78899999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 202 AIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 202 ~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++|.+|..+|++++|+.+|++++++.++
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~~p~ 97 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVELNPT 97 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999997654
No 49
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.51 E-value=1.4e-12 Score=103.26 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=116.1
Q ss_pred HHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHH
Q 026948 80 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEK 157 (230)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~ 157 (230)
..+.+.++..+.+++...... ...+......++..+|.+|...|++++|+.++++++++.... ++.+...
T Consensus 82 ~g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (311)
T 3nf1_A 82 QNKYKDAANLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVA 153 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH--------HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH--------hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 335666777777777664320 002334567788899999999999999999999999988765 6677788
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 158 KAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 158 ~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.++.++|.++...|++++|++++++++++.++. ++.+....++..+|.+|...|++++|+.++++++++.
T Consensus 154 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 154 KQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997765 4457778899999999999999999999999999864
No 50
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=6e-14 Score=116.01 Aligned_cols=120 Identities=8% Similarity=0.024 Sum_probs=87.5
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHhcCChHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQD-LEKAFTEFKAALELAQNVKDPIEEKKA 159 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~-~~~A~~~~~~al~l~~~~~~~~~~~~~ 159 (230)
.+.+.++..+.+++...|. ...+++.+|.++...|+ +++|+.+|++++++.++ ...+
T Consensus 111 g~~~~Al~~~~~al~l~P~----------------~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~------~~~a 168 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAA----------------NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK------NYQV 168 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT------CHHH
T ss_pred CChHHHHHHHHHHHHhCcc----------------CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC------CHHH
Confidence 3566677777777776665 44567777777777775 77777777777776555 5667
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 160 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 160 ~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
++++|.++...|++++|+.+|++++++. |....+|+++|.++..+|++++|+.+|++++++.+
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ld------P~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P 231 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQD------AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDV 231 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhC------ccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC
Confidence 7777777777777777777777777774 66677777777777777777777777777776543
No 51
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.50 E-value=2.3e-13 Score=103.88 Aligned_cols=134 Identities=7% Similarity=0.026 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC-
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD- 152 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~- 152 (230)
+.......+.+.++..+.+++...|. ...++..+|.+|..+|++++|+.++++++++.+....
T Consensus 49 ~~~~~~~~~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 49 GVCADNIKKYKEAADYFDIAIKKNYN----------------LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTCS----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHhhcHHHHHHHHHHHHHhCcc----------------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 34444444677788888888876665 5668899999999999999999999999998765211
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc--HHHHHHHHHHHHHHcCCH-----------------
Q 026948 153 PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--STEAYGAIADCYTELGDL----------------- 213 (230)
Q Consensus 153 ~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~--~~~~~~~lg~~y~~~g~~----------------- 213 (230)
......++.++|.++...|++++|+++|++++++. |. .+.++.++|.+|...|+.
T Consensus 113 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~ 186 (228)
T 4i17_A 113 EKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT------SKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYA 186 (228)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS------CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHH
T ss_pred HHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC------CCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 11234679999999999999999999999998874 77 789999999999999998
Q ss_pred ----------HHHHHHHHHHHHhhhc
Q 026948 214 ----------ERAARFYDKYISRLES 229 (230)
Q Consensus 214 ----------~~A~~~~~~al~~~~~ 229 (230)
++|+.+|++++++.++
T Consensus 187 ~~~~~~~~~~~~A~~~~~~a~~l~p~ 212 (228)
T 4i17_A 187 SEKAKADAAFKKAVDYLGEAVTLSPN 212 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999987654
No 52
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=5.5e-13 Score=100.88 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH----------------HHHHHHHcCCHHHHHHHHH
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG----------------LGASLQRQGKYREAIKYHS 181 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~----------------lg~~~~~~~~~~~Ai~~~~ 181 (230)
..++..|..+...|++++|+.+|++++++.+. ...+++. +|.++...|++++|+.+|+
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNID------RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 36778999999999999999999999996554 6677777 9999999999999999999
Q ss_pred HHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 182 MVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 182 ~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+++++. |..+.++.++|.+|...|++++|+.+|++++++.+.
T Consensus 79 ~al~~~------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 79 ELLQKA------PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHC------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 999986 778999999999999999999999999999987654
No 53
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.49 E-value=6.2e-13 Score=90.04 Aligned_cols=101 Identities=16% Similarity=0.259 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+..++.+|..+...|++++|+..+++++...+. ...++.++|.++...|++++|+.+++++++.. |.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~ 70 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK------PD 70 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TT
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC------cc
Confidence 3557889999999999999999999999996554 46789999999999999999999999999885 66
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++...|++++|..+|+++++..+
T Consensus 71 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 103 (118)
T 1elw_A 71 WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEA 103 (118)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCC
Confidence 788999999999999999999999999998754
No 54
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.49 E-value=4.5e-13 Score=100.34 Aligned_cols=111 Identities=21% Similarity=0.250 Sum_probs=95.4
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP----------IEEKKAARGLGASLQRQGKYREAIKYHSM 182 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~----------~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~ 182 (230)
....+..+..+|..++..|+|++|+.+|.+++++.+...+. .....++.++|.++...|+|++|+.++++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34466678899999999999999999999999976653311 11247899999999999999999999999
Q ss_pred HHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 183 VLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 183 al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++++. |....+++++|.+|..+|++++|+.+|++++.+.+.
T Consensus 114 al~~~------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 114 VLKID------KNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHHHS------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHhC------cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 99985 677899999999999999999999999999987643
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.49 E-value=8.4e-13 Score=91.06 Aligned_cols=107 Identities=18% Similarity=0.360 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-Ccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG-EYS 194 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~-~~~ 194 (230)
.+..++.+|..+...|++++|+.++.++++..+. ...++.++|.++...|++++|+.++++++....... +.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT------NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc------cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 4557889999999999999999999999997544 467889999999999999999999999999875432 222
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
....++.++|.++...|++++|+.+|+++++..+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 2378999999999999999999999999998653
No 56
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.49 E-value=1e-12 Score=90.50 Aligned_cols=105 Identities=18% Similarity=0.244 Sum_probs=93.8
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG 191 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~ 191 (230)
.+......+..+|..+...|++++|+.++++++...+. ...++..+|.++...|++++|+.++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~---- 76 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA------NAVYFCNRAAAYSKLGNYAGAVQDCERAICID---- 76 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC----
Confidence 34556778899999999999999999999999986544 46789999999999999999999999999874
Q ss_pred CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 192 EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 192 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|....++..+|.++...|++++|+.+|++++...+
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p 111 (131)
T 2vyi_A 77 --PAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP 111 (131)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred --ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc
Confidence 66688999999999999999999999999998764
No 57
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.49 E-value=2.9e-13 Score=110.02 Aligned_cols=111 Identities=13% Similarity=0.168 Sum_probs=97.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC---------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK---------DPIEEKKAARGLGASLQRQGKYREAIKYHSMV 183 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~---------~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~a 183 (230)
....+.++..+|..++..|++++|+.+|++++++.+... ..+....++.++|.++...|+|++|+.+|+++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445677888999999999999999999999999887642 12333688999999999999999999999999
Q ss_pred HHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 184 LQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 184 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+++. |....+++++|.+|..+|++++|+.+|++++++.+.
T Consensus 223 l~~~------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 223 LELD------SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN 262 (336)
T ss_dssp HHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred HHhC------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 9985 778899999999999999999999999999987653
No 58
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.48 E-value=5.2e-13 Score=92.53 Aligned_cols=105 Identities=14% Similarity=0.070 Sum_probs=89.3
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
+++.+|..++..|++++|+..|+++++..+. ......+++.+|.++...|+|++|+.+|+++++.. ++.+..+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~---p~~~~~~~ 77 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN---GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY---PTHDKAAG 77 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTSTTHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC---CCCcccHH
Confidence 4678899999999999999999999986554 22244789999999999999999999999998875 12222378
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+++.+|.++..+|++++|+.+|+++++..+.
T Consensus 78 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 78 GLLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999987653
No 59
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.48 E-value=8.6e-13 Score=95.09 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
...+..+..+|..++..|++++|+.+|.++++..+. ...++.++|.++...|++++|+.++++++++.
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~------ 77 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIELD------ 77 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------
Confidence 346667889999999999999999999999986554 46788999999999999999999999999885
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
|....++.++|.++..+|++++|+.+|++++...+.
T Consensus 78 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~ 113 (166)
T 1a17_A 78 KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 113 (166)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 667889999999999999999999999999987643
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.1e-12 Score=99.43 Aligned_cols=133 Identities=15% Similarity=0.122 Sum_probs=93.6
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh-----------
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN----------- 149 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~----------- 149 (230)
.+.+.++..+.+++...+.. ..+......++..+|.++...|++++|+.++++++++.+.
T Consensus 52 ~~~~~A~~~~~~a~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 122 (258)
T 3uq3_A 52 GEYETAISTLNDAVEQGREM---------RADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAE 122 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHT---------TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCccc---------ccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHH
Confidence 35566666666666665541 0123333677778888888888888888888888874322
Q ss_pred ---------cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHH
Q 026948 150 ---------VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFY 220 (230)
Q Consensus 150 ---------~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~ 220 (230)
....+....++..+|.++...|++++|+.+|++++... |....++.++|.++...|++++|+.++
T Consensus 123 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~ 196 (258)
T 3uq3_A 123 KELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA------PEDARGYSNRAAALAKLMSFPEAIADC 196 (258)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------cccHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 11456677778888888888888888888888887774 555677888888888888888888888
Q ss_pred HHHHHhhh
Q 026948 221 DKYISRLE 228 (230)
Q Consensus 221 ~~al~~~~ 228 (230)
+++++..+
T Consensus 197 ~~al~~~~ 204 (258)
T 3uq3_A 197 NKAIEKDP 204 (258)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCH
Confidence 88877654
No 61
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.48 E-value=2.9e-13 Score=99.36 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHHHHHHhCC
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGAS-LQRQGKY--REAIKYHSMVLQISEREGE 192 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~-~~~~~~~--~~Ai~~~~~al~~~~~~~~ 192 (230)
...++..+|.+|...|++++|+.+|.+++++.+. ...++.++|.+ +...|++ ++|+.+|+++++..
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~----- 111 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE------NAELYAALATVLYYQASQHMTAQTRAMIDKALALD----- 111 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS------CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHC-----
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhC-----
Confidence 3457889999999999999999999999998765 46788999999 8899999 99999999999985
Q ss_pred cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 193 YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 193 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
|....++.++|.+|...|++++|+.+|+++++..+.
T Consensus 112 -p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 112 -SNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred -CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 667889999999999999999999999999987653
No 62
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=2.6e-13 Score=94.08 Aligned_cols=103 Identities=16% Similarity=0.214 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
.....+++.+|..+...|++++|+.+++++++..+. ...++.++|.++...|++++|+.+++++++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~------ 80 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK------DAKLYSNRAACYTKLLEFQLALKDCEECIQLE------ 80 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC------
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------
Confidence 345668999999999999999999999999985443 47789999999999999999999999999885
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+....++.++|.++...|++++|+.+|+++++..+
T Consensus 81 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p 115 (133)
T 2lni_A 81 PTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDS 115 (133)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG
T ss_pred CCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC
Confidence 66788999999999999999999999999998754
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.47 E-value=1.2e-12 Score=101.92 Aligned_cols=124 Identities=14% Similarity=0.038 Sum_probs=103.3
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+ .++.....++..+|.++...|++++|+.+|++++++.+. ...++.
T Consensus 20 ~~~~A~~~~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~ 81 (275)
T 1xnf_A 20 QQEVILARMEQILASRA------------LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD------MPEVFN 81 (275)
T ss_dssp HHHHHHHHHHHHHTSSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC------CHHHHH
T ss_pred hHHHHHHHHHHHHhccc------------ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC------cHHHHH
Confidence 44556666666665532 123446778899999999999999999999999997544 567899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+++|++++++. |....++.++|.+|...|++++|+.+|+++++..+.
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~al~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 82 YLGIYLTQAGNFDAAYEAFDSVLELD------PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcC------ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999985 666789999999999999999999999999987543
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.46 E-value=1.1e-12 Score=102.39 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 68 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
+.+...+.......+.+.++..|.+.+...|. .+ ....+++.+|.+|+..|++++|+..|+++++..
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-----------~~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-----------HE--WAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-----------ST--THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-----------Cc--chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 34555566666667888899999999887765 11 125578999999999999999999999999976
Q ss_pred HhcCChHHHHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHHHHHhCCcccHHHHH--------------HHHHH
Q 026948 148 QNVKDPIEEKKAARGLGASLQR--------QGKYREAIKYHSMVLQISEREGEYSGSTEAY--------------GAIAD 205 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~--------~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~--------------~~lg~ 205 (230)
+.. +....+++.+|.++.. .|++++|+..|+++++... +.+....++ +.+|.
T Consensus 83 p~~---~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p---~~~~~~~a~~~~~~~~~~~~~~~~~la~ 156 (261)
T 3qky_A 83 QID---PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYP---NHELVDDATQKIRELRAKLARKQYEAAR 156 (261)
T ss_dssp TTC---TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCc---CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 542 2356889999999999 9999999999999988752 222333344 89999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 206 CYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 206 ~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+|...|++++|+..|+++++..+.
T Consensus 157 ~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 157 LYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHccCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999987653
No 65
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.46 E-value=4.4e-12 Score=107.85 Aligned_cols=147 Identities=10% Similarity=-0.049 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--
Q 026948 73 QLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-- 150 (230)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-- 150 (230)
....+..+++++.++..+.+++...... ...+....+.++.++|.+|..+|+|++|+.++++++++..+.
T Consensus 315 ~a~~~~~qg~~~eA~~l~~~aL~~~~~~--------lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG 386 (490)
T 3n71_A 315 KIDKARSEGLYHEVVKLCRECLEKQEPV--------FADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH 386 (490)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHTTT--------BCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcC
Confidence 3344444455667777777777665431 123455677788999999999999999999999999998863
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.+++..+..+++||.+|..+|+|++|+.+|++|+++.+.. .+.|.......+++.++.+++.|++|...|.++.+.+
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4778899999999999999999999999999999998884 5778889999999999999999999999999997754
No 66
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.45 E-value=4.1e-12 Score=92.68 Aligned_cols=120 Identities=22% Similarity=0.225 Sum_probs=90.6
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ....+..+|.++...|++++|..+++++++..+. ...++.
T Consensus 57 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 114 (186)
T 3as5_A 57 AVDRGTELLERSLADAPD----------------NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI------NFNVRF 114 (186)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHhcCCC----------------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH------hHHHHH
Confidence 455555666666555443 2346677888888888888888888888876443 456778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+++++++++.. +....++..+|.++...|++++|..+++++++..++
T Consensus 115 ~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 115 RLGVALDNLGRFDEAIDSFKIALGLR------PNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEG 176 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHhcC------ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 88888888888888888888888774 555778888888888888888888888888877653
No 67
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.45 E-value=2.6e-12 Score=98.87 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
....++..+|.++...|++++|+.+++++++..+. ...++.++|.++...|++++|+.+|+++++.. |
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~------~ 204 (258)
T 3uq3_A 137 EKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD------P 204 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------T
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC------H
Confidence 35667889999999999999999999999997654 46789999999999999999999999999885 6
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
..+.++..+|.++..+|++++|..+|++++++.
T Consensus 205 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 205 NFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 678999999999999999999999999999987
No 68
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=7.9e-13 Score=93.46 Aligned_cols=105 Identities=19% Similarity=0.240 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+..++.+|..++..|++++|+.+|++++++.+ +......++.++|.++...|++++|+.++++++++. |.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~ 97 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---TPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD------GG 97 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT------SC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---cchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC------cc
Confidence 456788999999999999999999999998432 333347889999999999999999999999999885 66
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...+++++|.++..+|++++|+.+|++++.+.+.
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 131 (148)
T 2dba_A 98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPK 131 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999999999987643
No 69
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.45 E-value=9.4e-13 Score=111.36 Aligned_cols=110 Identities=12% Similarity=0.112 Sum_probs=96.8
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---------PIEEKKAARGLGASLQRQGKYREAIKYHSMV 183 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~---------~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~a 183 (230)
....+..+..+|..++..|+|++|+.+|.+++++.+.... ......++.++|.++..+|+|++|+.+|+++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3456778889999999999999999999999998877421 2334688999999999999999999999999
Q ss_pred HHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 184 LQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 184 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+++. |....+|+++|.+|..+|++++|+.+|++++++.+
T Consensus 344 l~~~------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P 382 (457)
T 1kt0_A 344 LGLD------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNP 382 (457)
T ss_dssp HHHS------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred HhcC------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 9986 77889999999999999999999999999998754
No 70
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.45 E-value=3.2e-13 Score=92.65 Aligned_cols=92 Identities=16% Similarity=0.129 Sum_probs=77.1
Q ss_pred hCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Q 026948 129 RNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT 208 (230)
Q Consensus 129 ~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 208 (230)
.+|++++|+.+|++++++. .+.+....++.++|.++...|+|++|+.+|++++++. |..+.++.++|.++.
T Consensus 2 ~~g~~~~A~~~~~~al~~~---~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~ 72 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG---LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF------PNHQALRVFYAMVLY 72 (117)
T ss_dssp -----CCCHHHHHHHHSSC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcC---CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCchHHHHHHHHHHH
Confidence 3689999999999999841 1145588999999999999999999999999999985 777899999999999
Q ss_pred HcCCHHHHHHHHHHHHHhhhc
Q 026948 209 ELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 209 ~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|++++|+.++++++...+.
T Consensus 73 ~~g~~~~A~~~~~~al~~~p~ 93 (117)
T 3k9i_A 73 NLGRYEQGVELLLKIIAETSD 93 (117)
T ss_dssp HHTCHHHHHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999987643
No 71
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.45 E-value=1.6e-12 Score=105.65 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Q 026948 67 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL 146 (230)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l 146 (230)
...+...+..+....+.+.++..|.+++...+....... +.........+.+++++|.+|..+|++++|+.+|++++++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSN-EEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCS-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCCh-HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345566667777777889999999999998876321111 0000112233568889999999999999999999999997
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Q 026948 147 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERA-ARFYDKYIS 225 (230)
Q Consensus 147 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A-~~~~~~al~ 225 (230)
.+. ...+++++|.++...|++++|+.+|++++++. |....++.++|.++..+|++++| ...|++++.
T Consensus 226 ~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 226 DSN------NEKGLSRRGEAHLAVNDFELARADFQKVLQLY------PNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp CTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655 67899999999999999999999999999995 77789999999999999999999 567888876
Q ss_pred hh
Q 026948 226 RL 227 (230)
Q Consensus 226 ~~ 227 (230)
.+
T Consensus 294 ~~ 295 (336)
T 1p5q_A 294 RL 295 (336)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 72
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.44 E-value=2.6e-12 Score=92.57 Aligned_cols=132 Identities=18% Similarity=0.167 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+...+.......+.+.++..+.+++...+. ...++..+|.++...|++++|+.++.+++++.+
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIELNPS----------------NAIYYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 4444555555555777788888888877665 345788999999999999999999999999755
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHH--HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY--GAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~--~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
. ...++.++|.++...|++++|+.+|++++.+. |....++ ..++..+...|++++|+..++++..+
T Consensus 79 ~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~------p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 79 K------YIKGYYRRAASNMALGKFRAALRDYETVVKVK------PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 4 56789999999999999999999999999885 4445555 45555588999999999999998877
Q ss_pred hh
Q 026948 227 LE 228 (230)
Q Consensus 227 ~~ 228 (230)
++
T Consensus 147 ~~ 148 (166)
T 1a17_A 147 VD 148 (166)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 73
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.44 E-value=3e-12 Score=88.35 Aligned_cols=120 Identities=27% Similarity=0.446 Sum_probs=98.2
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+.+...+. ....+..+|.++...|++++|+.++++++...+. ...++.
T Consensus 16 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 73 (136)
T 2fo7_A 16 DYDEAIEYYQKALELDPR----------------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR------SAEAWY 73 (136)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHcCCc----------------chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC------chHHHH
Confidence 445555556666554443 2346778999999999999999999999986443 456788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+.++++++... +....++..+|.++...|++++|..++++++...+.
T Consensus 74 ~l~~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 74 NLGNAYYKQGDYDEAIEYYQKALELD------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999998874 556788999999999999999999999999987653
No 74
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.44 E-value=1.8e-12 Score=106.73 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC----------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK----------DPIEEKKAARGLGASLQRQGKYREAIKYHSMVL 184 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~----------~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al 184 (230)
..+..+..+|..++..|++++|+.+|++++++.+... ..+....++.++|.++..+|+|++|++++++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4556788999999999999999999999999765531 445578899999999999999999999999999
Q ss_pred HHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 185 QISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++. |..+.+++++|.+|..+|++++|+.+|++++++.+.
T Consensus 301 ~~~------p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 301 EID------PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp TTC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HhC------chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 875 778899999999999999999999999999987653
No 75
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.44 E-value=3e-12 Score=93.42 Aligned_cols=129 Identities=13% Similarity=0.111 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC
Q 026948 72 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK 151 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 151 (230)
..+.......+.+.++..+.+++...+. ...++..+|.++...|++++|+.+++++++..+.
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-- 74 (186)
T 3as5_A 13 DKGISHAKAGRYSQAVMLLEQVYDADAF----------------DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-- 74 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHTTTCCTTSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCcc----------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--
Confidence 3344444555677788888888876654 2457889999999999999999999999986443
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 152 DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 152 ~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++..+|.++...|++++|++++++++... |....++..+|.++...|++++|+.+++++++..+
T Consensus 75 ----~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 75 ----NVKVATVLGLTYVQVQKYDLAVPLLIKVAEAN------PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp ----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred ----CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 46788999999999999999999999999885 56678999999999999999999999999998654
No 76
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.43 E-value=2.3e-11 Score=99.36 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc--
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY-- 193 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~-- 193 (230)
...++..+|.++...|++++|..++.+++.+.+..++......++.++|.++...|++++|++++++++.+.+..++.
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 444566677777777777777777777777777766666666667777777777777777777777777776655443
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+....++.++|.++...|++++|..++++++.+.+
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 44556667777777777777777777777776543
No 77
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.43 E-value=3.5e-12 Score=87.05 Aligned_cols=101 Identities=27% Similarity=0.473 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
....++.+|.++...|++++|+..+.++++..+. ...++..+|.++...|++++|+.++++++... +.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~ 75 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PN 75 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC------Cc
Confidence 3557889999999999999999999999986443 45688999999999999999999999998874 55
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++..+|.++...|++++|..+|+++++..+
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 108 (125)
T 1na0_A 76 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 108 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 678999999999999999999999999998754
No 78
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.42 E-value=4.5e-13 Score=89.96 Aligned_cols=99 Identities=17% Similarity=0.177 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc--H
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--S 196 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~--~ 196 (230)
.+..+|.++...|++++|+.++++++++.+. ...++.++|.++...|++++|+.+|+++++.. +. .
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~------~~~~~ 75 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPE------ESKYWLMKGKALYNLERYEEAVDCYNYVINVI------EDEYN 75 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS------CCTTC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------cccch
Confidence 5677899999999999999999999997544 45788999999999999999999999999875 55 7
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhhhc
Q 026948 197 TEAYGAIADCYTEL-GDLERAARFYDKYISRLES 229 (230)
Q Consensus 197 ~~~~~~lg~~y~~~-g~~~~A~~~~~~al~~~~~ 229 (230)
..++.++|.++..+ |++++|+.++++++...+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 88999999999999 9999999999999887653
No 79
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.41 E-value=9.8e-12 Score=105.71 Aligned_cols=110 Identities=13% Similarity=-0.012 Sum_probs=98.5
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcc
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYS 194 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~ 194 (230)
.....+..+..+|+|++|+..+++++++..+. .+++....++.+||.+|..+|+|++|+.++++++++.++. .+.|
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 34455666889999999999999999998863 4677889999999999999999999999999999998874 5678
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+..+++||.+|..+|+|++|...|++|+++.+
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999864
No 80
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.41 E-value=6.4e-12 Score=94.67 Aligned_cols=122 Identities=21% Similarity=0.195 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-QDLEKAFTEFKAALELAQNVKDPIEEKKA 159 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-g~~~~A~~~~~~al~l~~~~~~~~~~~~~ 159 (230)
.+.+.++..+.+++...+. ...++..+|.++... |++++|+.+++++++ .+..+....+
T Consensus 56 ~~~~~A~~~~~~a~~~~~~----------------~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~ 115 (225)
T 2vq2_A 56 KVNDKAQESFRQALSIKPD----------------SAEINNNYGWFLCGRLNRPAESMAYFDKALA----DPTYPTPYIA 115 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT----STTCSCHHHH
T ss_pred CChHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc----CcCCcchHHH
Confidence 3566677777777766554 244678899999999 999999999999987 2233335678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 160 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 160 ~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+..+|.++...|++++|+.+++++++.. |....++..+|.++...|++++|+.++++++...+
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQ------PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999998875 66688999999999999999999999999998765
No 81
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.41 E-value=3.2e-12 Score=97.68 Aligned_cols=125 Identities=15% Similarity=0.186 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHH
Q 026948 76 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 155 (230)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~ 155 (230)
......+.+.++..+.+++...+. ...++..+|.++...|++++|+.+++++++..+.
T Consensus 66 ~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------ 123 (243)
T 2q7f_A 66 LLSSVNELERALAFYDKALELDSS----------------AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME------ 123 (243)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC------
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCc----------------chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------
Confidence 333334556666666666665543 3446777888888888888888888888876544
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++..+|.++...|++++|+.+++++++.. +....++..+|.++...|++++|+.+++++++..+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 190 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELN------ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP 190 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 35567788888888888888888888888774 55667888888888888888888888888887654
No 82
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.40 E-value=2.1e-12 Score=103.05 Aligned_cols=106 Identities=21% Similarity=0.287 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP---IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~---~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
..++..+|.++...|++++|+.++++++++.+..++. +....++.++|.++...|++++|+.+|++++++.
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~------ 266 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI------ 266 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC------
Confidence 4567889999999999999999999999987654443 3345688899999999999999999999998885
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|....++.++|.++..+|++++|..+|++++++.+
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 301 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRR 301 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCS
T ss_pred ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCC
Confidence 55678899999999999999999999999887654
No 83
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=5.5e-12 Score=102.67 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC
Q 026948 72 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK 151 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 151 (230)
..+.......+.+.++..+.+++...|. ...++..+|.+|...|++++|+.++++++++.+...
T Consensus 104 ~lg~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 104 FLGITQAENENEQAAIVALQRCLELQPN----------------NLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCC----------------CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccch
Confidence 3334444444667777777777776654 344677888888888888888888888887655421
Q ss_pred ChHH----------------------------------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Q 026948 152 DPIE----------------------------------------EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG 191 (230)
Q Consensus 152 ~~~~----------------------------------------~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~ 191 (230)
.... ...++.++|.++...|++++|+++|++++++.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---- 243 (365)
T 4eqf_A 168 YLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR---- 243 (365)
T ss_dssp CC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC----
T ss_pred HHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC----
Confidence 1110 35678888999999999999999999988875
Q ss_pred CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 192 EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 192 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|..+.++.++|.+|...|++++|+.+|++++++.+
T Consensus 244 --p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 278 (365)
T 4eqf_A 244 --PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQP 278 (365)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred --CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 66678888899999999999999999988887654
No 84
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=7.6e-12 Score=86.55 Aligned_cols=121 Identities=10% Similarity=0.048 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 68 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
+.+...+.......+.+.++..|.+++...|. ...++..+|.++...|++++|+.++++++++.
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 68 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE----------------DARGYSNRAAALAKLMSFPEAIADCNKAIEKD 68 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 34555566666667888899999999988776 34578899999999999999999999999976
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL 210 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 210 (230)
+. ...+++++|.++...|++++|+.+|++++++.....+.|....++..++.+...+
T Consensus 69 p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 69 PN------FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred CC------cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 55 5788999999999999999999999999999877666677888888888887654
No 85
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.39 E-value=7.7e-13 Score=103.10 Aligned_cols=98 Identities=13% Similarity=0.196 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
++..+|.+|...|++++|+.+++++++ .+ .+......++..+|.++...|++++|+++|++++++. |....
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~--~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~------~~~~~ 109 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KV--NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD------TTRLD 109 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TS--CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCTH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-cc--CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC------cccHH
Confidence 344555555555555555555555554 11 1222234445555555555555555555555555543 33445
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
++.++|.+|...|++++|+.+|+++++
T Consensus 110 ~~~~l~~~~~~~~~~~~A~~~~~~al~ 136 (272)
T 3u4t_A 110 MYGQIGSYFYNKGNFPLAIQYMEKQIR 136 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHhh
Confidence 555555555555555555555555544
No 86
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.39 E-value=1.5e-11 Score=103.02 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=94.0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHH
Q 026948 124 GKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEA 199 (230)
Q Consensus 124 g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~ 199 (230)
+......|+|++|+..+++++++..+. .+++....++.++|.+|..+|+|++|+.++++++++.++. .+.|..+..
T Consensus 305 ~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 384 (433)
T 3qww_A 305 FRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASM 384 (433)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 333445789999999999999998763 4678889999999999999999999999999999998884 567889999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 200 YGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 200 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+++||.+|..+|+|++|...|++|+++.+
T Consensus 385 l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 385 WLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999874
No 87
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.38 E-value=3.7e-12 Score=108.13 Aligned_cols=127 Identities=7% Similarity=-0.060 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC---------CCHHHHHHHHHHHH
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN---------QDLEKAFTEFKAAL 144 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------g~~~~A~~~~~~al 144 (230)
+..+....+.+.++..|.+++...|. ..++..+|.++... |++++|+.+|++++
T Consensus 144 g~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al 206 (474)
T 4abn_A 144 GEVYWKKGDVTSAHTCFSGALTHCKN-----------------KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAV 206 (474)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTCCC-----------------HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC-----------------HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHH
Confidence 33344444666777777777765442 25788999999999 99999999999999
Q ss_pred HHHHhcCChHHHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHHHHHhCCcc---cHHHHHHHHHHHHHHcCCH
Q 026948 145 ELAQNVKDPIEEKKAARGLGASLQRQ--------GKYREAIKYHSMVLQISEREGEYS---GSTEAYGAIADCYTELGDL 213 (230)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~lg~~~~~~--------~~~~~Ai~~~~~al~~~~~~~~~~---~~~~~~~~lg~~y~~~g~~ 213 (230)
++.+. ...+++++|.++... |++++|+.+|++++++. | ..+.+++++|.+|..+|++
T Consensus 207 ~~~p~------~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~~~~lg~~~~~~g~~ 274 (474)
T 4abn_A 207 QMDVL------DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD------RKASSNPDLHLNRATLHKYEESY 274 (474)
T ss_dssp HHCTT------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC------GGGGGCHHHHHHHHHHHHHTTCH
T ss_pred HhCCC------CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC------CCcccCHHHHHHHHHHHHHcCCH
Confidence 97655 577899999999999 99999999999999985 6 7889999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 026948 214 ERAARFYDKYISRLES 229 (230)
Q Consensus 214 ~~A~~~~~~al~~~~~ 229 (230)
++|+.+|++++++.+.
T Consensus 275 ~~A~~~~~~al~l~p~ 290 (474)
T 4abn_A 275 GEALEGFSQAAALDPA 290 (474)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999987543
No 88
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.38 E-value=5.8e-12 Score=96.26 Aligned_cols=120 Identities=18% Similarity=0.202 Sum_probs=102.2
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ....+..+|.++...|++++|+.+++++++..+. ...++.
T Consensus 106 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 163 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGME----------------NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN------DTEARF 163 (243)
T ss_dssp CHHHHHHHHHHHHHHTCC----------------SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc------cHHHHH
Confidence 556666677777766554 2346788999999999999999999999986554 456889
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+++++++++.. +....++..+|.+|...|++++|..+|++++++.++
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 164 QFGMCLANEGMLDEALSQFAAVTEQD------PGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------cccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcc
Confidence 99999999999999999999999885 566789999999999999999999999999987654
No 89
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.38 E-value=9e-12 Score=101.37 Aligned_cols=137 Identities=13% Similarity=0.083 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..+.+++...|. ...+++.+|.+|...|++++|+.+|++++++.+.
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 131 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPG----------------DAEAWQFLGITQAENENEQAAIVALQRCLELQPN 131 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 444455555666777888888888877765 3557889999999999999999999999997554
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc------------------------------------
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY------------------------------------ 193 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~------------------------------------ 193 (230)
...++.++|.++...|++++|+.+|++++++.......
T Consensus 132 ------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 205 (365)
T 4eqf_A 132 ------NLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAH 205 (365)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 57789999999999999999999999999876542211
Q ss_pred --cc--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 --SG--STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 --~~--~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|. .+.++.++|.+|...|++++|+.+|+++++..+
T Consensus 206 ~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 244 (365)
T 4eqf_A 206 QNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRP 244 (365)
T ss_dssp HSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred hCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 11 567899999999999999999999999988754
No 90
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.38 E-value=3e-12 Score=101.38 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
+..+..+|..++..|++++|+.+|.++++..+. ...++.++|.++...|++++|+.++++++++. |..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL------VAVYYTNRALCYLKMQQPEQALADCRRALELD------GQS 71 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC------TTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CCC
Confidence 346788999999999999999999999997554 57889999999999999999999999999874 777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 197 TEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+++++|.+|..+|++++|+.+|++++++.+
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 89999999999999999999999999998765
No 91
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.38 E-value=2.9e-11 Score=98.76 Aligned_cols=140 Identities=13% Similarity=0.059 Sum_probs=115.4
Q ss_pred HHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh--HH
Q 026948 78 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP--IE 155 (230)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~--~~ 155 (230)
...++.+.+...+.+++...+. .++....+.+...+|.++...|++++|+.++++++++.+..++. +.
T Consensus 64 ~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 64 HCKGELTRSLALMQQTEQMARQ----------HDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HhcCcHHHHHHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH
Confidence 3334566667777777777665 24445566778899999999999999999999999999876665 56
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++...|++++|..++++++.+.+..++. ....++.++|.++...|++++|..++++++.+..
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ-QQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG-GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 77889999999999999999999999999987654432 3567899999999999999999999999988753
No 92
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=9.5e-13 Score=108.82 Aligned_cols=132 Identities=8% Similarity=0.030 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHH-HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 70 VNEQLRQINAALR-RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 70 l~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
....+..+....+ .+.++..+.+++...|. ...+++++|.++...|++++|+.+|++++++.+
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~----------------~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP 197 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQPK----------------NYQVWHHRRVLVEWLRDPSQELEFIADILNQDA 197 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3344444444455 78888889999988776 566899999999999999999999999999776
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH-cCCHHHH-----HHHHHH
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE-LGDLERA-----ARFYDK 222 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~-~g~~~~A-----~~~~~~ 222 (230)
+ ...+++++|.++...|++++|+.+|++++++. |....+|+++|.++.. .|.+++| +.+|++
T Consensus 198 ~------~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~------P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~ 265 (382)
T 2h6f_A 198 K------NYHAWQHRQWVIQEFKLWDNELQYVDQLLKED------VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLE 265 (382)
T ss_dssp T------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHH
T ss_pred c------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 6 78899999999999999999999999999996 8889999999999999 5554888 599999
Q ss_pred HHHhhhc
Q 026948 223 YISRLES 229 (230)
Q Consensus 223 al~~~~~ 229 (230)
++.+.+.
T Consensus 266 Al~l~P~ 272 (382)
T 2h6f_A 266 MIKLVPH 272 (382)
T ss_dssp HHHHSTT
T ss_pred HHHHCCC
Confidence 9987653
No 93
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.37 E-value=3.2e-11 Score=83.95 Aligned_cols=103 Identities=12% Similarity=0.125 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
...+.+.......+++.++..|.+++...|. .+.++.++|.+|..+|++++|+.++++++++.+
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~----------------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~ 73 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKAIELDPS----------------NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGR 73 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 3455567777777889999999999988776 455788999999999999999999999999998
Q ss_pred hcC-ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 149 NVK-DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 149 ~~~-~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
... +....+.++.++|.++...|++++|+++|++++...
T Consensus 74 ~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~ 113 (127)
T 4gcn_A 74 ETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEF 113 (127)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 754 455577899999999999999999999999999874
No 94
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.37 E-value=1.6e-11 Score=99.70 Aligned_cols=125 Identities=18% Similarity=0.166 Sum_probs=106.1
Q ss_pred HHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q 026948 79 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK 158 (230)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 158 (230)
...+.+.++..+.+++...|. .. ...++..+|.++...|++++|+.++++++++.+. ...
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~-----------~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------~~~ 252 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPT-----------SI---DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN------DYL 252 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT-----------SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHH
T ss_pred hcccHHHHHHHHHHHHHhCcC-----------cc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC------CHH
Confidence 444667777777777776654 10 2446789999999999999999999999997544 467
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++.++|.++...|++++|+.+|++++++. |....++.++|.+|...|++++|+.+|++++++.++
T Consensus 253 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 317 (368)
T 1fch_A 253 LWNKLGATLANGNQSEEAVAAYRRALELQ------PGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRK 317 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 89999999999999999999999999885 677899999999999999999999999999987653
No 95
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=1.7e-11 Score=92.38 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc-
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS- 194 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~- 194 (230)
....+..+|.++...|++++|+.++.++++..+. ...++..+|.++...|++++|+++++++++.. |
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~ 179 (225)
T 2vq2_A 112 PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ------FPPAFKELARTKMLAGQLGDADYYFKKYQSRV------EV 179 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH------CS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CC
Confidence 4557888999999999999999999999986544 46788899999999999999999999998876 5
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.....+..++.++...|++++|..+++.+....+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 180 LQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 214 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC
Confidence 66778888899999999999999999988876543
No 96
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.37 E-value=1.3e-11 Score=106.82 Aligned_cols=129 Identities=13% Similarity=0.013 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC
Q 026948 72 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK 151 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~ 151 (230)
..+.......+.+.++..+++++...+. ...++..+|.+|..+|++++|+.+|++++++.+.
T Consensus 28 ~lg~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-- 89 (568)
T 2vsy_A 28 MLADAELGMGDTTAGEMAVQRGLALHPG----------------HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-- 89 (568)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC--
Confidence 3344444445677788888888887765 3557889999999999999999999999997654
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhhh
Q 026948 152 DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL---GDLERAARFYDKYISRLE 228 (230)
Q Consensus 152 ~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~---g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++...|++++|+++|++++++. |....++.++|.++..+ |++++|...|+++++..+
T Consensus 90 ----~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 90 ----HPGIALWLGHALEDAGQAEAAAAAYTRAHQLL------PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp ----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTC
T ss_pred ----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCC
Confidence 57789999999999999999999999999985 66788999999999999 999999999999998764
No 97
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=9.7e-12 Score=99.12 Aligned_cols=126 Identities=13% Similarity=0.142 Sum_probs=101.6
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.+.++..+.+++...+. ....+..+|.++...|++++|+.+++++++..+. ...++
T Consensus 139 ~~~~~A~~~~~~a~~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~ 196 (330)
T 3hym_B 139 SEHDQAMAAYFTAAQLMKG----------------CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE------DPFVM 196 (330)
T ss_dssp TCHHHHHHHHHHHHHHTTT----------------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT------CHHHH
T ss_pred cCHHHHHHHHHHHHHhccc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC------ChHHH
Confidence 3556666666666665543 2235667899999999999999999999985443 56789
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc---ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEY---SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+|.++...|++++|+.++++++++.+..++. +....++.++|.++...|++++|+.+|+++++..+
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 267 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP 267 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999987654443 44467999999999999999999999999998754
No 98
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=1.8e-11 Score=94.29 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=94.0
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ...++..+|.++...|++++|+.+++++++ .+..+....++.
T Consensus 86 ~~~~A~~~~~~a~~~~~~----------------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~ 145 (252)
T 2ho1_A 86 EPKLADEEYRKALASDSR----------------NARVLNNYGGFLYEQKRYEEAYQRLLEASQ----DTLYPERSRVFE 145 (252)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----CTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHCcC----------------cHHHHHHHHHHHHHHhHHHHHHHHHHHHHh----CccCcccHHHHH
Confidence 556666666666665443 234677888899999999999999988877 122333667888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.+|.++...|++++|+.+++++++.. +....++..+|.++...|++++|..+++++++..+
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 206 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRLN------RNQPSVALEMADLLYKEREYVPARQYYDLFAQGGG 206 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcC------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 89999999999999999999988874 55678888999999999999999999998887543
No 99
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.35 E-value=1.6e-11 Score=95.59 Aligned_cols=144 Identities=13% Similarity=0.133 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHh--------CCCHHHHHHHHH
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLR--------NQDLEKAFTEFK 141 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--------~g~~~~A~~~~~ 141 (230)
+...+.......+.+.++..+.+.+...|. .+ ....+++.+|.++.. .|++++|+..|+
T Consensus 55 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~-----------~~--~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~ 121 (261)
T 3qky_A 55 QFYLARAYYQNKEYLLAASEYERFIQIYQI-----------DP--RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQ 121 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----------CT--THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHCCC-----------Cc--hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence 444445555556788888889999888775 11 134578899999999 999999999999
Q ss_pred HHHHHHHhcCChHHH-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc
Q 026948 142 AALELAQNVKDPIEE-----------KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL 210 (230)
Q Consensus 142 ~al~l~~~~~~~~~~-----------~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 210 (230)
++++..+........ ...++.+|.++...|+|++|+..|+++++.. ++.+....+++.+|.+|..+
T Consensus 122 ~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 122 LFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY---PDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC---CCCchHHHHHHHHHHHHHHh
Confidence 999977653322211 1123899999999999999999999998874 23334778999999999987
Q ss_pred ----------CCHHHHHHHHHHHHHhhhc
Q 026948 211 ----------GDLERAARFYDKYISRLES 229 (230)
Q Consensus 211 ----------g~~~~A~~~~~~al~~~~~ 229 (230)
|++++|+..|+++++..++
T Consensus 199 g~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 227 (261)
T 3qky_A 199 AEQSVRARQPERYRRAVELYERLLQIFPD 227 (261)
T ss_dssp HHTSCGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred cccchhhcccchHHHHHHHHHHHHHHCCC
Confidence 9999999999999987654
No 100
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.35 E-value=4.1e-12 Score=109.99 Aligned_cols=119 Identities=15% Similarity=0.105 Sum_probs=92.8
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 162 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~ 162 (230)
.+.++..+++++...+. ...+++.+|.++...|++++|+.+|++++++.+. ...++.+
T Consensus 5 ~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~ 62 (568)
T 2vsy_A 5 GPRELLQLRAAVRHRPQ----------------DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG------HPEAVAR 62 (568)
T ss_dssp ----------------C----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT------CHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHH
Confidence 34455556666655544 3457889999999999999999999999996544 5788999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+|.++...|++++|+++|++++++. |....++.++|.+|..+|++++|+.+|+++++..+.
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAA------PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999985 667899999999999999999999999999987543
No 101
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.35 E-value=1.1e-12 Score=116.27 Aligned_cols=126 Identities=17% Similarity=0.078 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 153 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 153 (230)
+..+....+.+.++..+.+++...|. ...+++.+|.++...|++++|+..|++++++.+.
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---- 499 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVGW----------------RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG---- 499 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCC----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT----
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCcc----------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----
Confidence 34444445677888888888877765 4558889999999999999999999999997765
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++...|++++ +++|++++++. |....+++++|.++..+|++++|+.+|++++++.+
T Consensus 500 --~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~------P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 565 (681)
T 2pzi_A 500 --ELAPKLALAATAELAGNTDE-HKFYQTVWSTN------DGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSR 565 (681)
T ss_dssp --CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTST
T ss_pred --ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC------CchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCc
Confidence 57788999999999999999 99999999986 77889999999999999999999999999987543
No 102
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.34 E-value=1.1e-11 Score=93.20 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
+...++.+|..+...|++++|+.+|++++. . ...+++++|.++...|++++|+++|++++.+. |.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------~~ 69 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD------P---HSRICFNIGCMYTILKNMTEAEKAFTRSINRD------KH 69 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS------C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC------C---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------cc
Confidence 455678999999999999999999998852 2 35689999999999999999999999999985 66
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...+++++|.+|..+|++++|+.+|+++++..+
T Consensus 70 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 102 (213)
T 1hh8_A 70 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLR 102 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCC
Confidence 789999999999999999999999999998654
No 103
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.34 E-value=8.1e-12 Score=93.40 Aligned_cols=150 Identities=15% Similarity=0.165 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Q 026948 63 RRGELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKA 142 (230)
Q Consensus 63 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ 142 (230)
.......+...+.......+.+.++..|.+++...+....................++.++|.++...|++++|+.++.+
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 33444556666677777778888999999999877652110000000000111235788999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHH-HHHH
Q 026948 143 ALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAA-RFYD 221 (230)
Q Consensus 143 al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~-~~~~ 221 (230)
++++.+. ...+++++|.++...|++++|+.+|++++.+. |....++..++.++..+++++++. ..|.
T Consensus 114 al~~~p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 181 (198)
T 2fbn_A 114 VLKIDKN------NVKALYKLGVANMYFGFLEEAKENLYKAASLN------PNNLDIRNSYELCVNKLKEARKKDKLTFG 181 (198)
T ss_dssp HHHHSTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHhCcc------cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997554 57889999999999999999999999999985 777899999999999999998887 4444
Q ss_pred HHH
Q 026948 222 KYI 224 (230)
Q Consensus 222 ~al 224 (230)
+..
T Consensus 182 ~~f 184 (198)
T 2fbn_A 182 GMF 184 (198)
T ss_dssp ---
T ss_pred HHh
Confidence 443
No 104
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.33 E-value=2.9e-11 Score=96.20 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=102.0
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ....+..+|.++...|++++|+.++.++++..+. ...++.
T Consensus 153 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 210 (327)
T 3cv0_A 153 EYRECRTLLHAALEMNPN----------------DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD------DAQLWN 210 (327)
T ss_dssp HHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHhhCCC----------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------cHHHHH
Confidence 455666666666655543 3457889999999999999999999999986544 467899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+.+|+++++.. |....++..+|.+|...|++++|+.+|++++...+.
T Consensus 211 ~l~~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 211 KLGATLANGNRPQEALDAYNRALDIN------PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999885 667889999999999999999999999999987653
No 105
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=1.4e-11 Score=103.55 Aligned_cols=114 Identities=15% Similarity=0.018 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 192 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~---~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~ 192 (230)
.+..++.+|.++..+|++++|+.+|++++++.+.... .+....++.++|.+|..+|++++|+.++++++++.+...+
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 3446778999999999999999999999998875432 3345678999999999999999999999999999887654
Q ss_pred --cccHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhhhc
Q 026948 193 --YSGSTEAYGAIADCYTEL--GDLERAARFYDKYISRLES 229 (230)
Q Consensus 193 --~~~~~~~~~~lg~~y~~~--g~~~~A~~~~~~al~~~~~ 229 (230)
.+..+.++.++|.++... ++|++|+.+|++++.+-++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~ 170 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK 170 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC
Confidence 345678899999888765 4799999999999987543
No 106
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.33 E-value=1.1e-11 Score=101.72 Aligned_cols=97 Identities=20% Similarity=0.300 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
++..+|.++...|++++|+..|++++++.+. ...++.++|.++...|++++|+++|+++++.. |....
T Consensus 239 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~~~ 306 (388)
T 1w3b_A 239 VHGNLACVYYEQGLIDLAIDTYRRAIELQPH------FPDAYCNLANALKEKGSVAEAEDCYNTALRLC------PTHAD 306 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS------CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC------TTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------cccHH
Confidence 4445555555555555555555555553222 33455556666666666666666666665553 44455
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
++.++|.++...|++++|+..|+++++..
T Consensus 307 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 335 (388)
T 1w3b_A 307 SLNNLANIKREQGNIEEAVRLYRKALEVF 335 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 56666666666666666666666655543
No 107
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.33 E-value=3.2e-11 Score=93.83 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 153 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 153 (230)
+.......+.+.++..+.+++...|. ...++..+|.++...|++++|+.++++++++.+.
T Consensus 50 ~~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~---- 109 (275)
T 1xnf_A 50 GVLYDSLGLRALARNDFSQALAIRPD----------------MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT---- 109 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHcccHHHHHHHHHHHHHcCCC----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc----
Confidence 33334444556666666666665543 2335666777777777777777777777775443
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG------------------------------------------ 191 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~------------------------------------------ 191 (230)
...++.++|.++...|++++|+++|++++++.....
T Consensus 110 --~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T 1xnf_A 110 --YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFY 187 (275)
T ss_dssp --CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 345667777777777777777777777665431100
Q ss_pred ------------------Ccc----cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 192 ------------------EYS----GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 192 ------------------~~~----~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+ ....++..+|.+|...|++++|+.+|++++...+
T Consensus 188 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 246 (275)
T 1xnf_A 188 LGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNV 246 (275)
T ss_dssp TTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC
T ss_pred HHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCc
Confidence 000 1257888899999999999999999999987654
No 108
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.33 E-value=2.7e-11 Score=93.30 Aligned_cols=102 Identities=16% Similarity=0.079 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
....+..+|.++...|++++|+.+++++++..+. ...++..+|.++...|++++|+.+++++++.. +.
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------~~ 207 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN------QPSVALEMADLLYKEREYVPARQYYDLFAQGG------GQ 207 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS------CC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------cC
Confidence 4557888999999999999999999999886544 46778899999999999999999999987764 56
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...++..++.++...|++++|..+++++++..+.
T Consensus 208 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 208 NARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 6788999999999999999999999999887654
No 109
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.33 E-value=3.7e-11 Score=103.85 Aligned_cols=107 Identities=19% Similarity=0.161 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE-KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~-~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
..++..+|.+|...|++++|+..|+++++..++.+..+.. ..++..+|.++...|++++|++.|+++++.. |.
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~------p~ 548 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS------TN 548 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------SC
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CC
Confidence 3467789999999999999999999999987765544443 6789999999999999999999999998875 66
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...++..+|.+|...|++++|..+|++++++.++
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~ 582 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAISPN 582 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7789999999999999999999999999987654
No 110
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.32 E-value=8.9e-12 Score=101.15 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=104.7
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.+.++..+.+++...|. ...++..+|.++...|++++|+.+|++++++.+. ...++
T Consensus 231 g~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------~~~~~ 288 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRPN----------------DYLLWNKLGATLANGNQSEEAVAAYRRALELQPG------YIRSR 288 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred CCHHHHHHHHHHHHHhCcC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHH
Confidence 3566677777777766554 3457889999999999999999999999997544 56789
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-----cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGE-----YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~-----~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.++|.++...|++++|+.+|++++.+.....+ .+....+|..+|.+|..+|++++|...++++++.+.+
T Consensus 289 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~ 362 (368)
T 1fch_A 289 YNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLT 362 (368)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHH
Confidence 99999999999999999999999998754321 1223789999999999999999999999999987653
No 111
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.32 E-value=8.9e-12 Score=102.32 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
++..+|.++...|++++|+..|++++++.+. ...++.++|.++...|++++|+++|+++++.. |....
T Consensus 273 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~------p~~~~ 340 (388)
T 1w3b_A 273 AYCNLANALKEKGSVAEAEDCYNTALRLCPT------HADSLNNLANIKREQGNIEEAVRLYRKALEVF------PEFAA 340 (388)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC------TTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCcHH
Confidence 4555666666666666666666666654332 34455566666666666666666666665542 44455
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
++.++|.+|...|++++|+.+|++++++.
T Consensus 341 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 369 (388)
T 1w3b_A 341 AHSNLASVLQQQGKLQEALMHYKEAIRIS 369 (388)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 66666666666666666666666665543
No 112
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.31 E-value=4.5e-12 Score=103.09 Aligned_cols=110 Identities=18% Similarity=0.210 Sum_probs=91.2
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcC---C--------hHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK---D--------PIEEKKAARGLGASLQRQGKYREAIKYHS 181 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~---~--------~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~ 181 (230)
....+..+..+|..++..|+|++|+.+|.+++.+.+... . ......++.++|.++...|+|++|+.+|+
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345677888999999999999999999999998754410 0 00011489999999999999999999999
Q ss_pred HHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 182 MVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 182 ~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+++++. |....+|+++|.+|..+|++++|+.+|++++++.+
T Consensus 255 ~al~~~------p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 255 IVLTEE------EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHC------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 999985 77789999999999999999999999999987654
No 113
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.31 E-value=8.3e-11 Score=97.77 Aligned_cols=149 Identities=11% Similarity=0.045 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+..+...++.+.++..+.+.+...+. .............+|.++...|++++|+.++++++...+.
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQ----------FAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHT----------SCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------ccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 444444445555777777778777776654 2333344456678899999999999999999999999998
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.++......++.++|.++...|+|++|+.++++++.......+.+....++..+|.+|..+|++++|..+|++++.+..
T Consensus 128 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 128 EKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 8888888899999999999999999999999999999888888888999999999999999999999999999998753
No 114
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.30 E-value=1.6e-11 Score=97.77 Aligned_cols=126 Identities=10% Similarity=0.130 Sum_probs=102.0
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..+.+++...+. ...++..+|.++...|++++|+.+++++++..+. ...++.
T Consensus 187 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~ 244 (327)
T 3cv0_A 187 NYDSAAANLRRAVELRPD----------------DAQLWNKLGATLANGNRPQEALDAYNRALDINPG------YVRVMY 244 (327)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHH
Confidence 456666666666665543 3447889999999999999999999999996544 567889
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSG------STEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~------~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.+|.++...|++++|+++|++++.+.....+... ...++..+|.++..+|++++|...++++++.+++
T Consensus 245 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~ 318 (327)
T 3cv0_A 245 NMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAK 318 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999998732211111 6889999999999999999999999998887653
No 115
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.30 E-value=2.8e-11 Score=94.22 Aligned_cols=127 Identities=17% Similarity=0.088 Sum_probs=100.8
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.+.++..+.+++...+. ...++..+|...+..+++++|+.++++++++.+. ...++
T Consensus 122 ~~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~------~~~~~ 179 (272)
T 3u4t_A 122 GNFPLAIQYMEKQIRPTTT----------------DPKVFYELGQAYYYNKEYVKADSSFVKVLELKPN------IYIGY 179 (272)
T ss_dssp TCHHHHHHHHGGGCCSSCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHH
T ss_pred cCHHHHHHHHHHHhhcCCC----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc------chHHH
Confidence 3556666666666665443 3457888994444566999999999999997655 46788
Q ss_pred HHHHHHHHHcCC---HHHHHHHHHHHHHHHHHhCCc--ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 161 RGLGASLQRQGK---YREAIKYHSMVLQISEREGEY--SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 161 ~~lg~~~~~~~~---~~~Ai~~~~~al~~~~~~~~~--~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
..+|.++...|+ +++|+.+|++++++....++. .....++..+|.+|...|++++|+.+|++++++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 253 (272)
T 3u4t_A 180 LWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPT 253 (272)
T ss_dssp HHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 999999999999 999999999999987554442 234578999999999999999999999999998764
No 116
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.30 E-value=3.5e-11 Score=96.76 Aligned_cols=132 Identities=20% Similarity=0.180 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+...+.......+.+.++..+.+++...|. ...++..+|.++...|++++|+..+++++++.+
T Consensus 5 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 68 (359)
T 3ieg_A 5 KHLELGKKLLAAGQLADALSQFHAAVDGDPD----------------NYIAYYRRATVFLAMGKSKAALPDLTKVIALKM 68 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3444455555556778888888888877665 345788999999999999999999999999754
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc---cHHHHHHHH------------HHHHHHcCCH
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS---GSTEAYGAI------------ADCYTELGDL 213 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~---~~~~~~~~l------------g~~y~~~g~~ 213 (230)
. ...++..+|.++...|++++|+.+|+++++.. | ....++..+ |.++...|++
T Consensus 69 ~------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 136 (359)
T 3ieg_A 69 D------FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN------PSEQEEKEAESQLVKADEMQRLRSQALDAFDGADY 136 (359)
T ss_dssp T------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred C------cchHHHHHHHHHHHcCChHHHHHHHHHHHhcC------CcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCH
Confidence 4 45789999999999999999999999998774 5 566677666 7999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 026948 214 ERAARFYDKYISRLE 228 (230)
Q Consensus 214 ~~A~~~~~~al~~~~ 228 (230)
++|+..++++++..+
T Consensus 137 ~~A~~~~~~~~~~~~ 151 (359)
T 3ieg_A 137 TAAITFLDKILEVCV 151 (359)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999988654
No 117
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.3e-10 Score=96.65 Aligned_cols=156 Identities=12% Similarity=0.055 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccC-ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc
Q 026948 72 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVD-PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 150 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 150 (230)
++.+.+...++++.++..|.+.+...+............. .......++..+|.+|...|++++|.+++.++++..+..
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~ 88 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQF 88 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 3455566666788888889888888776544333222111 222344567899999999999999999999999999988
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
++......+...+|.++...|++++|+.++++++.+..+.++......++.++|.+|...|+|++|..++++++...
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~ 165 (434)
T 4b4t_Q 89 AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREF 165 (434)
T ss_dssp CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence 77777777888999999999999999999999999999988888899999999999999999999999999998764
No 118
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.30 E-value=9.5e-11 Score=94.21 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHH
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEA 199 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~ 199 (230)
...+|.++...|++++|+..++++++..+. +......++..+|.++...|++++|+++|+++++.. |..+.+
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~ 308 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME------PDNVNA 308 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------cccHHH
Confidence 346699999999999999999999997655 555566778899999999999999999999999884 667889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 200 YGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 200 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+..+|.++...|++++|..+|++++++.++
T Consensus 309 ~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 309 LKDRAEAYLIEEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999987654
No 119
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.1e-12 Score=88.27 Aligned_cols=101 Identities=10% Similarity=0.133 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+.++..+|..++..|++++|+..|++++++.+. ...++.++|.++...|++++|+++|++++++.....+...
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 76 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ------NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAI 76 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHH
Confidence 3457889999999999999999999999997655 5678999999999999999999999999988522111112
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDK 222 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~ 222 (230)
...++..+|.++..+|+++.|+..+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 77 RSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 388999999999999998888766554
No 120
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.29 E-value=4.4e-11 Score=91.35 Aligned_cols=141 Identities=14% Similarity=0.062 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..|.+.+...|. .+. ...+++.+|.+|+..|++++|+..|+++++..+.
T Consensus 7 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-----------~~~--~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~ 73 (225)
T 2yhc_A 7 IYATAQQKLQDGNWRQAITQLEALDNRYPF-----------GPY--SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT 73 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-----------STT--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-----------ChH--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC
Confidence 344455566666788888888888887664 111 2347889999999999999999999999997665
Q ss_pred cCChHHHHHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHHHHHhCCcccHH--------------
Q 026948 150 VKDPIEEKKAARGLGASLQR------------------QGKYREAIKYHSMVLQISEREGEYSGST-------------- 197 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~------------------~~~~~~Ai~~~~~al~~~~~~~~~~~~~-------------- 197 (230)
.. ....+++.+|.++.. .|++++|+..|+++++.... .+...
T Consensus 74 ~~---~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~---~~~a~~a~~~l~~~~~~~~ 147 (225)
T 2yhc_A 74 HP---NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN---SQYTTDATKRLVFLKDRLA 147 (225)
T ss_dssp CT---THHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT---CTTHHHHHHHHHHHHHHHH
T ss_pred CC---cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC---ChhHHHHHHHHHHHHHHHH
Confidence 22 244678888888876 67999999999999876522 22111
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 198 EAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 198 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
.....+|.+|...|++++|+..|+++++.++.
T Consensus 148 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 179 (225)
T 2yhc_A 148 KYEYSVAEYYTERGAWVAVVNRVEGMLRDYPD 179 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC
Confidence 12367899999999999999999999987653
No 121
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.29 E-value=2.4e-11 Score=87.90 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCC--CCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Q 026948 66 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRI--PEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAA 143 (230)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~a 143 (230)
....+.+.+.......+++.++..|.+++...+..... ...............++.++|.+|...|++++|+.++.++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 34566777777777778899999999998874321000 0000000003335668889999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHH-HHHHHHHHHHHHcCCHH
Q 026948 144 LELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-EAYGAIADCYTELGDLE 214 (230)
Q Consensus 144 l~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~-~~~~~lg~~y~~~g~~~ 214 (230)
+++.+. ...+++.+|.++...|++++|+.+|++++.+. |... .+...++.+....++++
T Consensus 90 l~~~p~------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~------p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 90 LKREET------NEKALFRRAKARIAAWKLDEAEEDLKLLLRNH------PAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------GGGHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCc------chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 997655 67899999999999999999999999999995 6655 66777888877665544
No 122
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.28 E-value=5.1e-11 Score=82.02 Aligned_cols=98 Identities=28% Similarity=0.486 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
+++.+|..+...|++++|+..++++++..+. ...++..+|.++...|++++|+.++++++... +....
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~ 70 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PRSAE 70 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTCHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc------chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC------CCchH
Confidence 5678899999999999999999999986433 45678899999999999999999999998874 55678
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
++..+|.++...|++++|+.++++++...+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999988654
No 123
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.28 E-value=5.2e-11 Score=81.77 Aligned_cols=116 Identities=13% Similarity=0.153 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..+.+++...+. ...++..+|.++...|++++|+.++.+++...+.
T Consensus 15 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 78 (131)
T 2vyi_A 15 LKTEGNEQMKVENFEAAVHFYGKAIELNPA----------------NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA 78 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHcCCC----------------CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc
Confidence 333444444444667777778777776654 2447889999999999999999999999996544
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCH
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 213 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 213 (230)
...++..+|.++...|++++|+.+|++++.+. |....++..+|.++..+|++
T Consensus 79 ------~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 79 ------YSKAYGRMGLALSSLNKHVEAVAYYKKALELD------PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHTTC
T ss_pred ------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC------ccchHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999885 66778999999999999876
No 124
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.28 E-value=3.1e-12 Score=108.72 Aligned_cols=101 Identities=16% Similarity=0.196 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
.+.++..+|..+...|++++|+.+|++++++.+. ...++.++|.++..+|+|++|+++|++++++. |.
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~------p~ 72 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIELD------KK 72 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC------TT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC------CC
Confidence 3445667788889999999999999999997555 57889999999999999999999999999885 67
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.+.+++++|.+|..+|++++|+.+|++++++.+
T Consensus 73 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p 105 (477)
T 1wao_1 73 YIKGYYRRAASNMALGKFRAALRDYETVVKVKP 105 (477)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 788999999999999999999999999998754
No 125
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.28 E-value=4.7e-12 Score=107.52 Aligned_cols=116 Identities=15% Similarity=0.186 Sum_probs=95.8
Q ss_pred HHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 026948 84 QAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGL 163 (230)
Q Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~l 163 (230)
+.++..|.+++...|. ...+++.+|.+|...|++++|+.+|++++++.+. ..++.++
T Consensus 120 ~~A~~~~~~al~~~p~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-------~~~~~~l 176 (474)
T 4abn_A 120 PEAEVLLSKAVKLEPE----------------LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-------KVSLQNL 176 (474)
T ss_dssp HHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-------HHHHHHH
T ss_pred HHHHHHHHHHHhhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------HHHHHHH
Confidence 5555555555555443 3457889999999999999999999999985322 3789999
Q ss_pred HHHHHHc---------CCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHh
Q 026948 164 GASLQRQ---------GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------GDLERAARFYDKYISR 226 (230)
Q Consensus 164 g~~~~~~---------~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--------g~~~~A~~~~~~al~~ 226 (230)
|.++... |++++|+++|++++++. |....+|+++|.+|..+ |++++|+.+|++++++
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD------VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 9999999 99999999999999885 77788999999999999 9999999999999987
Q ss_pred hh
Q 026948 227 LE 228 (230)
Q Consensus 227 ~~ 228 (230)
.+
T Consensus 251 ~p 252 (474)
T 4abn_A 251 DR 252 (474)
T ss_dssp CG
T ss_pred CC
Confidence 54
No 126
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.27 E-value=3.5e-12 Score=91.57 Aligned_cols=88 Identities=17% Similarity=0.249 Sum_probs=78.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHHHhCCcccHHHH
Q 026948 130 NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKY----------REAIKYHSMVLQISEREGEYSGSTEA 199 (230)
Q Consensus 130 ~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~----------~~Ai~~~~~al~~~~~~~~~~~~~~~ 199 (230)
.+.|++|+..+++++++.+. .+.++.++|.++...+++ ++|+..|++|+++. |....+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~------~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld------P~~~~A 82 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPL------DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID------PKKDEA 82 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC------TTCHHH
T ss_pred HhHHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC------cCcHHH
Confidence 35689999999999997766 788999999999998875 59999999999996 888999
Q ss_pred HHHHHHHHHHcC-----------CHHHHHHHHHHHHHhhhc
Q 026948 200 YGAIADCYTELG-----------DLERAARFYDKYISRLES 229 (230)
Q Consensus 200 ~~~lg~~y~~~g-----------~~~~A~~~~~~al~~~~~ 229 (230)
|+++|.+|..+| ++++|+.+|++|+++-++
T Consensus 83 ~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 83 VWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 999999999885 899999999999997653
No 127
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.27 E-value=5.6e-11 Score=82.09 Aligned_cols=116 Identities=13% Similarity=0.163 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+...+.......+.+.++..+.+++...+. ...++..+|.++...|++++|+.++++++++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~ 81 (133)
T 2lni_A 18 MVKNKGNECFQKGDYPQAMKHYTEAIKRNPK----------------DAKLYSNRAACYTKLLEFQLALKDCEECIQLEP 81 (133)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT----------------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC----------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 3444444455555667777778888776654 345788999999999999999999999999754
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCC
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD 212 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~ 212 (230)
. ...++.++|.++...|++++|+.+|++++... |....++..++.++..+|+
T Consensus 82 ~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 82 T------FIKGYTRKAAALEAMKDYTKAMDVYQKALDLD------SSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------GGGTHHHHHHHHHHHHHTC
T ss_pred C------chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC------CCchHHHHHHHHHHHHhcC
Confidence 4 56789999999999999999999999999885 6677899999999988775
No 128
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.26 E-value=1.1e-10 Score=97.82 Aligned_cols=108 Identities=12% Similarity=0.022 Sum_probs=95.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccH
Q 026948 121 LKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGS 196 (230)
Q Consensus 121 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~ 196 (230)
......+..+|+|++|+..+++++++..+. .+++....++.++|.+|..+|+|++|+.++++++++.++. ++.|..
T Consensus 291 l~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~ 370 (429)
T 3qwp_A 291 LKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVR 370 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHH
Confidence 333445668899999999999999876543 4677789999999999999999999999999999998874 567889
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 197 TEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+..+++||.+|..+|++++|..+|++|+++.+
T Consensus 371 a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~ 402 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMR 402 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999874
No 129
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.26 E-value=3.2e-11 Score=101.99 Aligned_cols=146 Identities=16% Similarity=0.142 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 66 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
....+...+..+....+++.++..|.+++...+....... +...........+++++|.+|..+|+|++|+.+|+++++
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSE-KESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCh-HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3345666677777777889999999999988776211000 000011222356788999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHH-HHHHH
Q 026948 146 LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF-YDKYI 224 (230)
Q Consensus 146 l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~-~~~al 224 (230)
+.+. ...+++++|.++..+|+|++|+.+|++++++. |....++.+++.++..++++++|... |++.+
T Consensus 346 ~~p~------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~------P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 346 LDSA------NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN------PQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred cCCc------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665 67899999999999999999999999999885 67778999999999999999988753 44433
No 130
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.26 E-value=7.6e-11 Score=84.72 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Q 026948 63 RRGELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKA 142 (230)
Q Consensus 63 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ 142 (230)
.+...+.+...+..+...++.+.++..|++++...|. ....++.+|.+|...|++++|+.+|++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~----------------~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY----------------NVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 3455556667777777777899999999999998886 456899999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 143 ALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 143 al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
++++.+. .+.+++++|.++...|++++|+.+|++++++.
T Consensus 96 al~l~P~------~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 96 AFALGKN------DYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHSSS------CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHhhCCC------CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 9998766 56789999999999999999999999999985
No 131
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.25 E-value=2e-10 Score=82.60 Aligned_cols=121 Identities=12% Similarity=0.032 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 66 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
+...+.+.+......++++.++..|.+++...|.-... + ........+.++.++|.++..+|+|++|+.+|+++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~---~-a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPE---E-AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTT---S-CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcch---h-hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34567777888888889999999999999998862111 0 1122223455899999999999999999999999999
Q ss_pred HHHh-cCChHHHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 026948 146 LAQN-VKDPIEEKKAA----RGLGASLQRQGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 146 l~~~-~~~~~~~~~~~----~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~ 190 (230)
++++ ..-.+....++ +++|.++..+|++++|+.+|++++++....
T Consensus 86 l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 86 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 8332 12233366777 999999999999999999999999998553
No 132
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.24 E-value=1.3e-11 Score=109.24 Aligned_cols=100 Identities=19% Similarity=0.142 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
...+++.+|.++..+|++++|+..|++++++.+. ...+++++|.++...|++++|++.|++++++. |.
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------P~ 499 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAERVGW------RWRLVWYRAVAELLTGDYDSATKHFTEVLDTF------PG 499 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS------TT
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CC
Confidence 3447889999999999999999999999997766 67899999999999999999999999999996 77
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 196 STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++.++|.++..+|++++ +.+|++++++.+
T Consensus 500 ~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P 531 (681)
T 2pzi_A 500 ELAPKLALAATAELAGNTDE-HKFYQTVWSTND 531 (681)
T ss_dssp CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT
T ss_pred ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC
Confidence 78999999999999999999 999999998754
No 133
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.24 E-value=1.3e-10 Score=96.83 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=89.4
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHH
Q 026948 121 LKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY 200 (230)
Q Consensus 121 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~ 200 (230)
..+|..+...|++++|+.+|++++++.+. +.......+..+|.++...|++++|+.++++++++. |....++
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~------p~~~~~~ 332 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME------PDNVNAL 332 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC------TTCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC------cccHHHH
Confidence 45599999999999999999999986554 444456789999999999999999999999999885 6678999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 201 GAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 201 ~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
..+|.++...|++++|+.+|++++++.+.
T Consensus 333 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 361 (450)
T 2y4t_A 333 KDRAEAYLIEEMYDEAIQDYETAQEHNEN 361 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999987543
No 134
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.24 E-value=1.9e-10 Score=99.39 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
..++..+|..|...|++++|+.+|+++++..+. ...++..+|.++...|++++|+++|+++++...+.+..|..
T Consensus 441 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~ 514 (597)
T 2xpi_A 441 HLPYLFLGMQHMQLGNILLANEYLQSSYALFQY------DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKP 514 (597)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGG
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhh
Confidence 346778899999999999999999999886443 45678999999999999999999999999987765555653
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 197 -TEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 197 -~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..++..+|.+|...|++++|+..|+++++..+
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p 547 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAIDALNQGLLLST 547 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 78999999999999999999999999988654
No 135
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.23 E-value=2.4e-11 Score=89.19 Aligned_cols=66 Identities=20% Similarity=0.267 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--STEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~--~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
...+++++|.++...|++++|+..|+++++.. |. ...++.++|.++..+|++++|...|++++...
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~------p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVN------LGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------TTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC------cccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 46778899999999999999999999988774 33 35689999999999999999999999998753
No 136
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.23 E-value=1.2e-10 Score=75.23 Aligned_cols=84 Identities=26% Similarity=0.442 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
....++.+|.++...|++++|+.++++++++.+. ...++.++|.++...|++++|+.+|++++++. |.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~------p~ 75 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PN 75 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC------CC
Confidence 4567889999999999999999999999986544 46788999999999999999999999999885 67
Q ss_pred HHHHHHHHHHHHHHcC
Q 026948 196 STEAYGAIADCYTELG 211 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g 211 (230)
...++.++|.++..+|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 7889999999988765
No 137
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=9e-11 Score=99.92 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=82.1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQ----------GKYREAIKYHSMVLQISE 188 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~----------~~~~~Ai~~~~~al~~~~ 188 (230)
.+..+|.++...|++++|+.+|++++++.+...........+..+|.++... |++++|+.+|+++++..
T Consensus 380 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~- 458 (537)
T 3fp2_A 380 VPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELD- 458 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhC-
Confidence 5667788888888888888888888887766444433444466777778777 88888888888888774
Q ss_pred HhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 189 REGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 189 ~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
|....++..+|.+|...|++++|+.+|++++++.+.
T Consensus 459 -----p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 459 -----PRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILART 494 (537)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred -----CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 667789999999999999999999999999987643
No 138
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.22 E-value=1.2e-10 Score=84.35 Aligned_cols=111 Identities=15% Similarity=0.087 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 68 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 68 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
..+...+.......+.+.++..|.+++...+. ...+++.+|.+|...|++++|+.+|++++++.
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 75 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPA----------------NPIYLSNRAAAYSASGQHEKAAEDAELATVVD 75 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc----------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 44555566666666788888999999988776 35578899999999999999999999999976
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC 206 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 206 (230)
+. ...+++++|.++...|++++|+.+|++++++. |....++.+.+..
T Consensus 76 p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 76 PK------YSKAWSRLGLARFDMADYKGAKEAYEKGIEAE------GNGGSDAMKRGLE 122 (164)
T ss_dssp TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH------SSSCCHHHHHHHH
T ss_pred CC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCchHHHHHHHHH
Confidence 55 57889999999999999999999999999987 4444444444443
No 139
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.21 E-value=1.9e-10 Score=95.89 Aligned_cols=134 Identities=20% Similarity=0.203 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Q 026948 67 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL 146 (230)
Q Consensus 67 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l 146 (230)
...+...+.......+.+.++..|.+++...|. ...+++.+|.++...|++++|+..+.+++++
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD----------------NYIAYYRRATVFLAMGKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 344555555566666778888888888876654 3557889999999999999999999999997
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHH---HHHH------------HHHHHHHHcC
Q 026948 147 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST---EAYG------------AIADCYTELG 211 (230)
Q Consensus 147 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~---~~~~------------~lg~~y~~~g 211 (230)
.+. ...++..+|.++...|++++|+.+|+++++.. |... .++. .+|.++...|
T Consensus 90 ~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~ 157 (450)
T 2y4t_A 90 KMD------FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN------PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSG 157 (450)
T ss_dssp CTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 554 57889999999999999999999999998764 4444 4444 4577899999
Q ss_pred CHHHHHHHHHHHHHhhh
Q 026948 212 DLERAARFYDKYISRLE 228 (230)
Q Consensus 212 ~~~~A~~~~~~al~~~~ 228 (230)
++++|+.+|++++...+
T Consensus 158 ~~~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 158 DYTAAIAFLDKILEVCV 174 (450)
T ss_dssp CHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHhCC
Confidence 99999999999988654
No 140
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.20 E-value=1.2e-10 Score=95.93 Aligned_cols=139 Identities=15% Similarity=0.128 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+...+.......+.+.++..|.+++...+........+...........+++++|.+|..+|++++|+.++++++++.+
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 45555566666667788888888888754331000000001113344667888999999999999999999999999544
Q ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHH
Q 026948 149 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF 219 (230)
Q Consensus 149 ~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~ 219 (230)
. ...+++++|.++...|++++|+++|++++++. |....++..++.++..+++++++...
T Consensus 305 ~------~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~------P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 305 S------NTKALYRRAQGWQGLKEYDQALADLKKAQEIA------PEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred h------hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 67899999999999999999999999999985 66788999999999999999888653
No 141
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.20 E-value=4.6e-10 Score=87.73 Aligned_cols=94 Identities=18% Similarity=0.300 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHH
Q 026948 117 LLSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISE 188 (230)
Q Consensus 117 ~~~~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~ 188 (230)
..+++.+|.+|.. .+++++|+.+|+++++. ....++.++|.++.. .+++++|+++|+++++..
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--------~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~- 144 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--------KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN- 144 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--------CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC-
Confidence 3467788888888 88888888888888773 145678888888888 888888888888887642
Q ss_pred HhCCcccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 026948 189 REGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 226 (230)
Q Consensus 189 ~~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~ 226 (230)
...++.++|.+|.. .+++++|+.+|+++++.
T Consensus 145 -------~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 145 -------DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp -------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred -------cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 35678888888888 88888888888888765
No 142
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.19 E-value=1.4e-10 Score=82.01 Aligned_cols=101 Identities=10% Similarity=-0.044 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 66 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
....+...+.......+.+.++..+.+++...|. ....++.+|.++...|++++|+.+|++++.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY----------------DARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3344555556666666788888889888887775 455788999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 026948 146 LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE 188 (230)
Q Consensus 146 l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~ 188 (230)
+.+. ...+++++|.++...|++++|+.+|++++++..
T Consensus 81 ~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 81 MDIN------EPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HCTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCC------CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 7655 567889999999999999999999999999873
No 143
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.19 E-value=3.2e-10 Score=86.50 Aligned_cols=106 Identities=8% Similarity=-0.049 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHH
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST 197 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~ 197 (230)
..++.+|..++..|++++|+..|+++++..+. .+....+++.+|.++...|+|++|+..|+++++.. ++.+...
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~---P~~~~~~ 78 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPF---GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN---PTHPNID 78 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTCTTHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC---cCCCcHH
Confidence 36888999999999999999999999986543 23346789999999999999999999999998875 2334455
Q ss_pred HHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHhhhc
Q 026948 198 EAYGAIADCYTE------------------LGDLERAARFYDKYISRLES 229 (230)
Q Consensus 198 ~~~~~lg~~y~~------------------~g~~~~A~~~~~~al~~~~~ 229 (230)
.+++.+|.++.. .|++++|+..|+++++..+.
T Consensus 79 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~ 128 (225)
T 2yhc_A 79 YVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN 128 (225)
T ss_dssp HHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC
Confidence 689999999986 57999999999999987654
No 144
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.18 E-value=1.8e-10 Score=98.03 Aligned_cols=100 Identities=22% Similarity=0.222 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
..++..+|.++...|++++|+..+++++++.+. ...++..+|.++...|++++|+.+|+++++.. |..
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------~~~ 377 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE------NVYPYIQLACLLYKQGKFTESEAFFNETKLKF------PTL 377 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCC
Confidence 446778888888889999999999888886544 34678888889999999999999999988874 556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 197 TEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..++..+|.++...|++++|+.+|+++++..+
T Consensus 378 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 378 PEVPTFFAEILTDRGDFDTAIKQYDIAKRLEE 409 (537)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Confidence 77888889999999999999999999887654
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.18 E-value=9.1e-11 Score=93.07 Aligned_cols=135 Identities=14% Similarity=0.097 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH-
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ- 148 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~- 148 (230)
+..........++.+.++..|++++...|. ...+++.+|.++..+|++++|+..+++++...+
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~ 183 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSNQ----------------NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD 183 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTS----------------CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCCc----------------chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc
Confidence 444455555556778888888888888776 445788899999999999999887776543111
Q ss_pred --------------h-------------cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH--HHH
Q 026948 149 --------------N-------------VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS--TEA 199 (230)
Q Consensus 149 --------------~-------------~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~--~~~ 199 (230)
. ....+....+++++|.++...|++++|++.|+++++.. |.. ..+
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~------p~~~~~~a 257 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXD------LTAADGQT 257 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTGGGGHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcc------cccccchH
Confidence 0 00122245678888888888888888888888888875 444 678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 200 YGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 200 ~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+.++|.++..+|+.++|...|++++..
T Consensus 258 ~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 258 RXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 888888888888888888888888764
No 146
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.18 E-value=6.9e-11 Score=99.93 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR---QGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~---~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
..+..+|.++...|++++|+.+++++++..+..........++.++|.++.. .|++++|+.+|++++... |
T Consensus 373 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~------~ 446 (514)
T 2gw1_A 373 EVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD------P 446 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC------T
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC------c
Confidence 3677889999999999999999999999887744333234588999999999 999999999999999885 6
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
....++..+|.+|...|++++|..+|++++++.+
T Consensus 447 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 480 (514)
T 2gw1_A 447 RSEQAKIGLAQMKLQQEDIDEAITLFEESADLAR 480 (514)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcc
Confidence 6788999999999999999999999999998764
No 147
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.18 E-value=1.1e-10 Score=79.31 Aligned_cols=82 Identities=12% Similarity=0.158 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH
Q 026948 135 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE 214 (230)
Q Consensus 135 ~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 214 (230)
+|+..|+++++..+. ...+++++|.++...|++++|+.+|++++++. |....+++++|.+|..+|+++
T Consensus 3 ~a~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~g~~~ 70 (115)
T 2kat_A 3 AITERLEAMLAQGTD------NMLLRFTLGKTYAEHEQFDAALPHLRAALDFD------PTYSVAWKWLGKTLQGQGDRA 70 (115)
T ss_dssp CHHHHHHHHHTTTCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCCC------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHcCCHH
Confidence 456677777764333 45677788888888888888888888887774 556777888888888888888
Q ss_pred HHHHHHHHHHHhhh
Q 026948 215 RAARFYDKYISRLE 228 (230)
Q Consensus 215 ~A~~~~~~al~~~~ 228 (230)
+|+.+|++++++.+
T Consensus 71 ~A~~~~~~al~~~~ 84 (115)
T 2kat_A 71 GARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 88888888877653
No 148
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.18 E-value=3.4e-10 Score=90.04 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=67.3
Q ss_pred HhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q 026948 128 LRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 207 (230)
Q Consensus 128 ~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 207 (230)
...|++++|+..|+++++..+. ...+++++|.++...|++++|+..|+++++.. |..+.++.++|.++
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~------~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~------p~~~~~l~~l~~~~ 244 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP------TLLLLNGQAACHMAQGRWEAAEGVLQEALDKD------SGHPETLINLVVLS 244 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHH
Confidence 3456777777777777764332 45677888888888888888888888888875 77778888888888
Q ss_pred HHcCCHHH-HHHHHHHHHHhhhc
Q 026948 208 TELGDLER-AARFYDKYISRLES 229 (230)
Q Consensus 208 ~~~g~~~~-A~~~~~~al~~~~~ 229 (230)
..+|++++ +..++++++++.++
T Consensus 245 ~~~g~~~eaa~~~~~~~~~~~P~ 267 (291)
T 3mkr_A 245 QHLGKPPEVTNRYLSQLKDAHRS 267 (291)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCTT
T ss_pred HHcCCCHHHHHHHHHHHHHhCCC
Confidence 88888865 46777888776543
No 149
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.17 E-value=1.3e-10 Score=83.02 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 66 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 66 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
....+...+.......+.+.++..|.+++...|. ....++.+|.++...|++++|+.+|++++.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY----------------DSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3444555566666667888888899998887776 455788999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 146 LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 146 l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
+.+. ...+++++|.++...|++++|+.+|++++++.
T Consensus 84 l~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 84 MDIX------EPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCC------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 7665 56789999999999999999999999999986
No 150
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.16 E-value=1.8e-11 Score=99.47 Aligned_cols=148 Identities=9% Similarity=0.047 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCccccc-CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 69 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIV-DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
.+...+.......+++.++..|.+++...+............ ........+++++|.+|..+|+|++|+.++++++++.
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 344444444444466778888888887765411000000000 0000011367899999999999999999999999976
Q ss_pred HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHh
Q 026948 148 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC-YTELGDLERAARFYDKYISR 226 (230)
Q Consensus 148 ~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~-y~~~g~~~~A~~~~~~al~~ 226 (230)
+. ...+++++|.++..+|+|++|+.+|++++++. |....++.+++.+ ....++.+++...|.+++..
T Consensus 261 p~------~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~------p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 261 EK------NPKALFRRGKAKAELGQMDSARDDFRKAQKYA------PDDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp TT------CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred CC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 54 67899999999999999999999999999886 6678889999998 45667888999999999876
Q ss_pred hh
Q 026948 227 LE 228 (230)
Q Consensus 227 ~~ 228 (230)
.+
T Consensus 329 ~p 330 (338)
T 2if4_A 329 KD 330 (338)
T ss_dssp --
T ss_pred CC
Confidence 54
No 151
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.15 E-value=1.3e-11 Score=104.99 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=92.0
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..|++++...|. ...++..+|.+|..+|++++|+.++++++++.+. ...+++
T Consensus 21 ~~~~A~~~~~~Al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~------~~~~~~ 78 (477)
T 1wao_1 21 DYENAIKFYSQAIELNPS----------------NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK------YIKGYY 78 (477)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 456677778888877665 3567889999999999999999999999996443 678899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH--HHHcCCHHHHHHHHH
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC--YTELGDLERAARFYD 221 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~--y~~~g~~~~A~~~~~ 221 (230)
++|.++..+|++++|+++|++++++. |....++.+++.+ +...|++++|+..++
T Consensus 79 ~lg~~~~~~g~~~eA~~~~~~al~~~------p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 79 RRAASNMALGKFRAALRDYETVVKVK------PHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS------TTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999985 5566788888888 889999999999998
No 152
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=5.6e-10 Score=94.31 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
...+..+..+|..++..|++++|+..|+++++..+ ...++.++|.++...|++++|+.+|+++++..
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------ 69 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-------DPVFYSNLSACYVSVGDLKKVVEMSTKALELK------ 69 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-------cHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC------
Confidence 34667899999999999999999999999999652 26789999999999999999999999999885
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
|....++..+|.+|..+|++++|+..|++++...+
T Consensus 70 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 104 (514)
T 2gw1_A 70 PDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGD 104 (514)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 77889999999999999999999999999987653
No 153
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=1.5e-10 Score=97.21 Aligned_cols=142 Identities=10% Similarity=-0.010 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 153 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 153 (230)
+......++.+.++..|+++++..+.... .......+.++.++|.+|..+|++++|+.++++++++.+.....
T Consensus 58 g~~~~~~G~~~eAl~~~~kAl~~~~~~~~-------~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~ 130 (472)
T 4g1t_A 58 AYLKHLKGQNEAALECLRKAEELIQQEHA-------DQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP 130 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHSG-------GGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcCc-------cccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc
Confidence 33444445778888888888877543100 01122245577899999999999999999999999998875432
Q ss_pred --HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHh
Q 026948 154 --IEEKKAARGLGASLQRQ--GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT---ELGDLERAARFYDKYISR 226 (230)
Q Consensus 154 --~~~~~~~~~lg~~~~~~--~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~---~~g~~~~A~~~~~~al~~ 226 (230)
...+.++.++|.++... ++|++|+++|++++++. |..+.++..+|.++. ..+++++|++.|++++++
T Consensus 131 ~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~------p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l 204 (472)
T 4g1t_A 131 YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK------PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRL 204 (472)
T ss_dssp SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS------TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhc
Confidence 23466788888777654 57999999999999985 777888888888754 467788999999999886
Q ss_pred hh
Q 026948 227 LE 228 (230)
Q Consensus 227 ~~ 228 (230)
.+
T Consensus 205 ~p 206 (472)
T 4g1t_A 205 NP 206 (472)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 154
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.13 E-value=2.1e-09 Score=89.99 Aligned_cols=130 Identities=13% Similarity=0.067 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--
Q 026948 73 QLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-- 150 (230)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-- 150 (230)
.+......++.+.++..+++++..... ....+....+.++.++|.+|..+|+|++|+.++++++.+....
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~--------~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSE--------RLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSC--------CCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccC--------cCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 344444444555666666666654332 1224455677788899999999999999999999999998863
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHc
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTEL 210 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~ 210 (230)
.+++..+..+++||.+|..+|+|++|+.++++|+++.+.. ++.|....++.+|+.+..++
T Consensus 365 ~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 365 GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999999999884 56788888999999988665
No 155
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.13 E-value=1.9e-10 Score=76.47 Aligned_cols=66 Identities=12% Similarity=0.160 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
...+++++|.++...|+|++|+++|++++++. |....+|.++|.+|..+|++++|+.+|++++++.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETD------PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 34556666666666666666666666666654 4455566666666666666666666666666554
No 156
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.12 E-value=2.1e-10 Score=78.31 Aligned_cols=87 Identities=13% Similarity=0.138 Sum_probs=69.9
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 161 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~ 161 (230)
+.+.++..|.+++...+ ++.....++..+|.+|...|++++|+.++++++++.+. ...+++
T Consensus 5 ~~~~A~~~~~~al~~~~-------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~ 65 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGL-------------QGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN------HQALRV 65 (117)
T ss_dssp --CCCHHHHHHHHSSCC-------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHcCC-------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------chHHHH
Confidence 34445556666665421 12336678999999999999999999999999997665 578899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 162 GLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 162 ~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
++|.++...|++++|+.+|++++...
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999886
No 157
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.10 E-value=1.2e-09 Score=86.85 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
..++..+|.++..+|++++|+..++++++..+. .. ...........+...|++++|+..|+++++.. |..
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~---~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~------p~~ 199 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDED---AT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADKC------SPT 199 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT---CH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS------CCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC---cH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC------CCc
Confidence 346788999999999999999999999986433 11 11111111123334589999999999999875 677
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 197 TEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
+.+++++|.++..+|++++|...|++++...+.
T Consensus 200 ~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~ 232 (291)
T 3mkr_A 200 LLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG 232 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 899999999999999999999999999987653
No 158
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.10 E-value=2.1e-09 Score=73.61 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc-CC
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KD 152 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-~~ 152 (230)
+.......+.+.++..+.+++...+. ....+..+|.++...|++++|+.++++++++.+.. .+
T Consensus 11 ~~~~~~~~~~~~A~~~~~~a~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 74 (131)
T 1elr_A 11 GNDAYKKKDFDTALKHYDKAKELDPT----------------NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED 74 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCc----------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh
Confidence 33344444666777777777776654 24478899999999999999999999999998864 34
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC
Q 026948 153 PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 211 (230)
Q Consensus 153 ~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g 211 (230)
......+++++|.++...|++++|+++|++++++. + .......++.+...++
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEH------R-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------C-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC------C-CHHHHHHHHHHHHHHH
Confidence 44448899999999999999999999999999874 3 3677788888776554
No 159
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.10 E-value=1.9e-09 Score=73.11 Aligned_cols=103 Identities=26% Similarity=0.418 Sum_probs=83.7
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.+.++..+.+++...+. ....+..+|.++...|++++|+.+++++++..+. ...++
T Consensus 23 ~~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~ 80 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPN----------------NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAW 80 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred CCHHHHHHHHHHHHHHCcC----------------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc------cHHHH
Confidence 3555666666666665543 2346788999999999999999999999986443 45678
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 211 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g 211 (230)
..+|.++...|++++|+.+++++++.. |....++.++|.++...|
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELD------PNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHhcc
Confidence 899999999999999999999999885 667889999999987765
No 160
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.10 E-value=1.2e-09 Score=85.41 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHH
Q 026948 118 LSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISER 189 (230)
Q Consensus 118 ~~~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~ 189 (230)
.+++.+|.+|.. .+++++|+.+|+++++.. ...+++++|.++.. .+++++|+++|+++++.
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--- 107 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--- 107 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc---
Confidence 456667777777 777777777777776631 35667777777777 77777777777777654
Q ss_pred hCCcccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 026948 190 EGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 226 (230)
Q Consensus 190 ~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~ 226 (230)
..+.++.++|.+|.. .+++++|+.+|+++++.
T Consensus 108 -----~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 108 -----KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp -----TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred -----CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 145677777777777 77777777777777764
No 161
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.09 E-value=8.8e-10 Score=76.77 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..|.+++...|. ...++..+|.++...|++++|+.++++++++.+.
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGRAITRNPL----------------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhCcC----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 344445555555777788888888887765 3457889999999999999999999999997655
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 211 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g 211 (230)
...+++++|.++...|++++|+.+|++++.+...... .....+...+..+.....
T Consensus 76 ------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~-~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 76 ------SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRL-NFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-CCTTHHHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHH-HHHHHHHHHHHHHHHHHH
Confidence 5778999999999999999999999999999855221 124556666666655443
No 162
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.07 E-value=1e-09 Score=83.07 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=60.9
Q ss_pred HHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHh
Q 026948 119 SRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 119 ~~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~~ 190 (230)
+++.+|.+|.. .+++++|+.+|+++.+. ++....+.++++||.+|.. .+++++|+.+|+++++.
T Consensus 87 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~----~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---- 158 (212)
T 3rjv_A 87 GEIVLARVLVNRQAGATDVAHAITLLQDAARD----SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---- 158 (212)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS----TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc----CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc----
Confidence 55666666665 66666666666666651 1222446667777777777 66677777777776544
Q ss_pred CCcccHHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHHh
Q 026948 191 GEYSGSTEAYGAIADCYTEL-G-----DLERAARFYDKYISR 226 (230)
Q Consensus 191 ~~~~~~~~~~~~lg~~y~~~-g-----~~~~A~~~~~~al~~ 226 (230)
+..+.+++++|.+|..- | ++++|+.+|+++.+.
T Consensus 159 ---~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 159 ---SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp ---SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 45566667777766653 2 677777777766654
No 163
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.07 E-value=7e-10 Score=81.26 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH------------
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS------------ 187 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~------------ 187 (230)
.+.+|..+...|++++|+..|+++++..+. ...++.++|.++...|++++|+..+++++...
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 82 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDELQS------RGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKL 82 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHT------SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHH
Confidence 455666666666666666666666665544 45666666666666666666666665542211
Q ss_pred ---HHhC-------------CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 188 ---EREG-------------EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 188 ---~~~~-------------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.... ..|....+++++|.++...|++++|+..|+++++..+
T Consensus 83 ~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p 139 (176)
T 2r5s_A 83 ELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNL 139 (176)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCc
Confidence 1001 1366788999999999999999999999999998653
No 164
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=1.4e-09 Score=73.10 Aligned_cols=110 Identities=12% Similarity=0.157 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..+.+++...|. ....+..+|.++...|++++|+.+++++++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPH----------------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCC----------------cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc
Confidence 333444444445667777778888776664 3447889999999999999999999999997544
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 207 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 207 (230)
...++.++|.++...|++++|+++++++++.. |....++..++.+.
T Consensus 71 ------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~------~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 71 ------WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE------ANNPQLKEGLQNME 116 (118)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC------TTCHHHHHHHHHHH
T ss_pred ------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC------CCCHHHHHHHHHhh
Confidence 56789999999999999999999999998874 66678888888764
No 165
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.05 E-value=2.9e-09 Score=75.08 Aligned_cols=88 Identities=16% Similarity=0.142 Sum_probs=79.5
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 123 TGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 123 ~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
+|.+|...+..++|+.+|+++.+. ..+.+++++|.+|.. .+++++|+++|+++.+. ..+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--------g~~~ 94 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--------NDQD 94 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--------TCHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--------CCHH
Confidence 899999999999999999999883 256889999999999 89999999999999754 3578
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 026948 199 AYGAIADCYTE----LGDLERAARFYDKYISR 226 (230)
Q Consensus 199 ~~~~lg~~y~~----~g~~~~A~~~~~~al~~ 226 (230)
+++++|.+|.. .+|+++|+.+|++|.+.
T Consensus 95 a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 95 GCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 99999999999 99999999999999875
No 166
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.8e-09 Score=74.88 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..|.+++...+. +......+..+|.+|...|++++|+.++++++++.+.
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 97 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDAT-------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG 97 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHccc-------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc
Confidence 333344444445667777778888776654 1123567889999999999999999999999997554
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 209 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 209 (230)
...+++++|.++...|++++|+.+|++++.+. |....++..++.+...
T Consensus 98 ------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 98 ------DVKALYRRSQALEKLGRLDQAVLDLQRCVSLE------PKNKVFQEALRNISGP 145 (148)
T ss_dssp ------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------SSCHHHHHHHHHHHCS
T ss_pred ------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------CCcHHHHHHHHHHHhh
Confidence 46788999999999999999999999999885 6667778777776543
No 167
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.03 E-value=3.4e-10 Score=89.54 Aligned_cols=99 Identities=20% Similarity=0.251 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 70 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 70 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
+...+.......+.+.++..|.+++...|. ....+.++|.+|...|++++|+..+++++++.+.
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 70 (281)
T 2c2l_A 7 LKEQGNRLFVGRKYPEAAACYGRAITRNPL----------------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 70 (281)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 444455556666778888889988887775 3557889999999999999999999999985443
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 026948 150 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 150 ~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~ 190 (230)
...+++++|.++...|++++|+.+|++++++....
T Consensus 71 ------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 71 ------SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 67889999999999999999999999999987653
No 168
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.03 E-value=1.9e-09 Score=85.40 Aligned_cols=67 Identities=9% Similarity=-0.012 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
...+++.+|..+...|++++|+..|.++++..+.. ....++.++|.++...|+.++|+..|++++..
T Consensus 218 ~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~----~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 218 DAALATQLALQLHQVGRNEEALELLFGHLRXDLTA----ADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG----GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc----ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 45578899999999999999999999999965541 13678999999999999999999999999764
No 169
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.02 E-value=3e-09 Score=72.10 Aligned_cols=86 Identities=22% Similarity=0.337 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
....++.+|.+|...|++++|+.+|++++++.+. ...+++++|.++...|++++|+.+|++++++....++
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~--- 88 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT------YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGD--- 88 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc---
Confidence 3457889999999999999999999999997654 5678899999999999999999999999998754332
Q ss_pred HHHHHHHHHHHHHHcC
Q 026948 196 STEAYGAIADCYTELG 211 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g 211 (230)
......+......++
T Consensus 89 -~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 89 -QQVVKELQVFLRRLA 103 (115)
T ss_dssp -HHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhc
Confidence 334444544444443
No 170
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.02 E-value=6.6e-10 Score=79.72 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=73.8
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCH----------HHHHHHHHHHHHHHHhc
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDL----------EKAFTEFKAALELAQNV 150 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~----------~~A~~~~~~al~l~~~~ 150 (230)
.+++.++..+.+++...|. .+.++.++|.++...+++ ++|+..|++++++.++
T Consensus 16 ~~feeA~~~~~~Ai~l~P~----------------~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~- 78 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPL----------------DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK- 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-
T ss_pred hHHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-
Confidence 3667788888889988887 566888999999988775 5999999999998776
Q ss_pred CChHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHH
Q 026948 151 KDPIEEKKAARGLGASLQRQG-----------KYREAIKYHSMVLQIS 187 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~-----------~~~~Ai~~~~~al~~~ 187 (230)
...+++++|.+|..+| ++++|+.+|++|+++.
T Consensus 79 -----~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 79 -----KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp -----CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -----cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 7889999999999885 8999999999999996
No 171
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.01 E-value=9.5e-09 Score=86.05 Aligned_cols=114 Identities=15% Similarity=-0.028 Sum_probs=90.3
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc--CChHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAA 160 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~--~~~~~~~~~~ 160 (230)
+++++..+++++..... ....+....+.++.++|.+|..+|+|++|+.++++++.+..+. .+++..+..+
T Consensus 314 ~~eA~~~~~~~L~i~~~--------~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 385 (433)
T 3qww_A 314 PSELLEICELSQEKMSS--------VFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMW 385 (433)
T ss_dssp HHHHHHHHHHHHHHHTT--------TBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhC--------ccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 35555666666655433 1123455677788999999999999999999999999999863 4788899999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHH
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIA 204 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg 204 (230)
++||.+|..+|+|++|+.+|++|+++.+.. ++.|....+..+|.
T Consensus 386 ~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 386 LKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 999999999999999999999999998874 45566666665553
No 172
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=5.2e-09 Score=79.13 Aligned_cols=114 Identities=15% Similarity=0.007 Sum_probs=97.4
Q ss_pred HHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCC----CHHHHHHHHHHHHHHHHhcCChHH
Q 026948 80 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ----DLEKAFTEFKAALELAQNVKDPIE 155 (230)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g----~~~~A~~~~~~al~l~~~~~~~~~ 155 (230)
..+.+.++..|+++...- ...+++.+|.+|.. + ++++|+.+|+++.+. .
T Consensus 31 ~~~~~~A~~~~~~a~~~g------------------~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--------g 83 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAAQG------------------DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--------G 83 (212)
T ss_dssp HTCHHHHHHHHHHHHHTT------------------CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--------T
T ss_pred CCCHHHHHHHHHHHHHcC------------------CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--------C
Confidence 346677788888876532 23478899999998 7 999999999999762 2
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHhCCcc--cHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQR----QGKYREAIKYHSMVLQISEREGEYS--GSTEAYGAIADCYTE----LGDLERAARFYDKYIS 225 (230)
Q Consensus 156 ~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~~~~~~--~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~ 225 (230)
.+.+++++|.+|.. .+++++|+++|+++.+.. + ..+.++++||.+|.. .+++++|+.+|+++++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~------~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 157 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDS------ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS 157 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSST------TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcC------CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 56789999999998 999999999999999985 4 468899999999999 9999999999999988
Q ss_pred h
Q 026948 226 R 226 (230)
Q Consensus 226 ~ 226 (230)
.
T Consensus 158 ~ 158 (212)
T 3rjv_A 158 L 158 (212)
T ss_dssp T
T ss_pred c
Confidence 6
No 173
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.01 E-value=2.7e-09 Score=68.70 Aligned_cols=69 Identities=28% Similarity=0.466 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
+....+++.+|.++...|++++|+.+|+++++.. |....++.++|.++...|++++|+.+|+++++..+
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 3467789999999999999999999999999885 66788999999999999999999999999998754
No 174
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.00 E-value=7.4e-09 Score=81.48 Aligned_cols=127 Identities=10% Similarity=-0.007 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHH
Q 026948 77 INAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE 156 (230)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 156 (230)
+....+++.+...+...+...|. .. ..+.+|.+++..+++++|+.+++++... .++...
T Consensus 112 L~~~g~y~eA~~~l~~~~~~~p~----------------~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~----~d~~~~ 170 (282)
T 4f3v_A 112 EAAQGNYADAMEALEAAPVAGSE----------------HL-VAWMKAVVYGAAERWTDVIDQVKSAGKW----PDKFLA 170 (282)
T ss_dssp HHHHTCHHHHHHHHTSSCCTTCH----------------HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC----SCHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCc----------------hH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc----CCcccH
Confidence 33334566666655555543322 45 7899999999999999999999866541 233334
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG-STEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~-~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..+++++|.++...|++++|+.+|++++.- +..|. ..++++++|.++.++|+.++|...|++++...+
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~g----~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P 239 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEANDS----PAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----TTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhcC----CCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 568999999999999999999999998632 12133 678999999999999999999999999987643
No 175
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.00 E-value=5.5e-09 Score=71.86 Aligned_cols=112 Identities=15% Similarity=0.057 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChH
Q 026948 75 RQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPI 154 (230)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 154 (230)
.......+.+.++..+.+.+...|. .. ....+++.+|.++...|++++|+.+|+++++..+.. .
T Consensus 10 ~~~~~~~~~~~A~~~~~~~~~~~p~-----------~~--~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~---~ 73 (129)
T 2xev_A 10 FDALKNGKYDDASQLFLSFLELYPN-----------GV--YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH---D 73 (129)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSS-----------ST--THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS---T
T ss_pred HHHHHhCCHHHHHHHHHHHHHHCCC-----------Cc--ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC---c
Confidence 3344444666777777777776654 11 123478899999999999999999999999965542 2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Q 026948 155 EEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT 208 (230)
Q Consensus 155 ~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 208 (230)
....+++.+|.++...|++++|+.+|+++++.. |....+......+..
T Consensus 74 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 74 KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY------PGSDAARVAQERLQS 121 (129)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHH
Confidence 236789999999999999999999999998875 444444444444433
No 176
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.00 E-value=6.4e-10 Score=73.27 Aligned_cols=89 Identities=19% Similarity=0.284 Sum_probs=71.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK-AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~-~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
.+..|..+...|++++|+..|+++++..+. ... +++++|.++...|++++|+.+|++++++. |....
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~ 70 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV------GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN------PDSPA 70 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------TTSTH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCcHH
Confidence 356789999999999999999999996544 456 89999999999999999999999999885 55555
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
++.+ +.+.+|..+|++++...+
T Consensus 71 ~~~~--------~~~~~a~~~~~~~~~~~p 92 (99)
T 2kc7_A 71 LQAR--------KMVMDILNFYNKDMYNQL 92 (99)
T ss_dssp HHHH--------HHHHHHHHHHCCTTHHHH
T ss_pred HHHH--------HHHHHHHHHHHHHhccCc
Confidence 5533 556777777777665543
No 177
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.99 E-value=1e-09 Score=75.58 Aligned_cols=92 Identities=11% Similarity=-0.023 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh
Q 026948 74 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 153 (230)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 153 (230)
+.......+.+.++..+++++...|. ...+++.+|.++...|++++|+..|++++++.+.
T Consensus 24 g~~~~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---- 83 (121)
T 1hxi_A 24 GLSMLKLANLAEAALAFEAVCQKEPE----------------REEAWRSLGLTQAENEKDGLAIIALNHARMLDPK---- 83 (121)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----
Confidence 34444445677788888888888776 4568899999999999999999999999997665
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
...++.++|.++...|++++|+.+|++++++.
T Consensus 84 --~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 84 --DIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred --CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999998875
No 178
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.99 E-value=2.1e-09 Score=71.92 Aligned_cols=68 Identities=21% Similarity=0.324 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
...++.++|.++...|+|++|+++|++++++. |..+.++.++|.++..+|++++|+.+|++++++.++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ------PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 35678999999999999999999999999985 667899999999999999999999999999987653
No 179
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.99 E-value=3.1e-09 Score=70.51 Aligned_cols=87 Identities=15% Similarity=0.260 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
...+++.+|.+|...|++++|+.+|++++++.+. ...++.++|.++...|++++|++.|++++++....++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~--- 76 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT--- 76 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC---
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc---
Confidence 3457889999999999999999999999997665 5668999999999999999999999999999865443
Q ss_pred HHHHHHHHHHHHHHcCC
Q 026948 196 STEAYGAIADCYTELGD 212 (230)
Q Consensus 196 ~~~~~~~lg~~y~~~g~ 212 (230)
......+...+...+.
T Consensus 77 -~~~~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 77 -QKDLSELQDAKLKAEG 92 (100)
T ss_dssp -HHHHHHHHHHHHHHHT
T ss_pred -hhHHHHHHHHHHHccc
Confidence 3444555555544433
No 180
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.97 E-value=6.6e-10 Score=81.18 Aligned_cols=91 Identities=18% Similarity=0.247 Sum_probs=76.5
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH
Q 026948 127 FLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC 206 (230)
Q Consensus 127 ~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 206 (230)
+...|++++|+..+.++++..+. ...++..+|.++...|++++|+.+|++++.+. |....++.++|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~ 87 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQ------NSEQWALLGEYYLWQNDYSNSLLAYRQALQLR------GENAELYAALATV 87 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCS------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH------CSCHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHH
Confidence 34578999999999999986544 56789999999999999999999999999986 6678899999999
Q ss_pred -HHHcCCH--HHHHHHHHHHHHhhhc
Q 026948 207 -YTELGDL--ERAARFYDKYISRLES 229 (230)
Q Consensus 207 -y~~~g~~--~~A~~~~~~al~~~~~ 229 (230)
+...|++ ++|+.+++++++..+.
T Consensus 88 l~~~~~~~~~~~A~~~~~~al~~~p~ 113 (177)
T 2e2e_A 88 LYYQASQHMTAQTRAMIDKALALDSN 113 (177)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHCTT
T ss_pred HHHhcCCcchHHHHHHHHHHHHhCCC
Confidence 8899999 9999999999987543
No 181
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.95 E-value=5.1e-09 Score=83.58 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=36.2
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 170 QGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 170 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.|++++|+..|+++++.. |..+.++.++|..+...|++++|+..|++++..
T Consensus 182 ~~~~~~A~~~~~~al~~~------p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 182 SKDKSVAFKIFELGLKKY------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp SCCHHHHHHHHHHHHHHH------TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHhC------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 466666666666666654 555677777788777788888888888888774
No 182
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.92 E-value=3.5e-09 Score=84.52 Aligned_cols=100 Identities=9% Similarity=-0.001 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK-AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~-~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
....+..+|..+...|++++|...|++++++.+. ... ++.++|.++.+.|++++|+..|+++++.. |
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------p 165 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI------DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA------R 165 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS------CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST------T
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc------CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------C
Confidence 3334445555555555555555555555543221 111 44455555555555555555555554432 2
Q ss_pred cHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhh
Q 026948 195 GSTEAYGAIADCYTE-LGDLERAARFYDKYISRL 227 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 227 (230)
....+|...+..... .|++++|+..|+++++..
T Consensus 166 ~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~ 199 (308)
T 2ond_A 166 TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY 199 (308)
T ss_dssp CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 223334333333221 455555555555555544
No 183
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.88 E-value=3.1e-08 Score=66.27 Aligned_cols=83 Identities=16% Similarity=0.138 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 195 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~-~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~ 195 (230)
+..++.+|..++..|+|..|+.+|++|++..+.... ......++.++|.++.++|++++|+.++++++++. |.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~------P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD------PE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC------CC
Confidence 556788999999999999999999999987766432 34578889999999999999999999999998885 66
Q ss_pred HHHHHHHHHH
Q 026948 196 STEAYGAIAD 205 (230)
Q Consensus 196 ~~~~~~~lg~ 205 (230)
...+..|++.
T Consensus 79 ~~~~~~n~~~ 88 (104)
T 2v5f_A 79 HQRANGNLKY 88 (104)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHhhHHH
Confidence 6777777763
No 184
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.85 E-value=4.7e-08 Score=65.34 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC-cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQISEREGE-YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~-~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
-++.+|..++..|+|..|+.+|++|++....... ......++.++|.+|.++|++++|+.++++++.+.+.
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999876542 3467889999999999999999999999999987653
No 185
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.81 E-value=2.7e-08 Score=65.29 Aligned_cols=63 Identities=24% Similarity=0.285 Sum_probs=57.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE-AYGAIADCYTELGDLERAARFYDKYISRLES 229 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~-~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 229 (230)
++.|..+...|++++|+..|+++++.. |.... ++.++|.+|..+|++++|+.+|++++++.+.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTE------PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC------SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC------CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 568899999999999999999999885 66778 9999999999999999999999999987653
No 186
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.74 E-value=1.1e-07 Score=80.60 Aligned_cols=94 Identities=20% Similarity=0.218 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhCC---CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHh
Q 026948 118 LSRLKTGKNFLRNQ---DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 118 ~~~~~~g~~~~~~g---~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~~ 190 (230)
.+++.+|.+|...| ++++|+.+|+++.+. ..+.+++++|.+|.. .+++++|+++|+++++.
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~---- 396 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--------GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ---- 396 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC----
Confidence 36778899888866 788999999998873 146789999999999 89999999999998764
Q ss_pred CCcccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhh
Q 026948 191 GEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISRL 227 (230)
Q Consensus 191 ~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~~ 227 (230)
..+.+++++|.+|.. .+++++|..+|+++++.-
T Consensus 397 ----~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 397 ----GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp ----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 247899999999999 899999999999999865
No 187
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.72 E-value=1.7e-07 Score=79.41 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=56.2
Q ss_pred HHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHh
Q 026948 119 SRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISERE 190 (230)
Q Consensus 119 ~~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~----~~~~~~Ai~~~~~al~~~~~~ 190 (230)
+++.+|.+|.. .+++++|+.+|+++.+. ....+++++|.+|.. .+++++|+++|+++++.
T Consensus 113 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~---- 180 (490)
T 2xm6_A 113 AQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ---- 180 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----
Confidence 45556666665 56666666666665541 134556666666666 56666666666666542
Q ss_pred CCcccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 026948 191 GEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 226 (230)
Q Consensus 191 ~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~~ 226 (230)
+.+.+++++|.+|.. .+++++|+.+|+++.+.
T Consensus 181 ----~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 181 ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp ----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 235566666776666 66777777777666653
No 188
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.65 E-value=1.5e-07 Score=81.54 Aligned_cols=118 Identities=9% Similarity=0.016 Sum_probs=102.9
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHHHhcCC
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQD----------LEKAFTEFKAALELAQNVKD 152 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~l~~~~~~ 152 (230)
.++++..+.+++..-|. ...+++.++.++...|+ +++++..+.++++..++
T Consensus 45 ~eeal~~~~~~l~~nP~----------------~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK--- 105 (567)
T 1dce_A 45 DESVLELTSQILGANPD----------------FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK--- 105 (567)
T ss_dssp SHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT---
T ss_pred CHHHHHHHHHHHHHCch----------------hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC---
Confidence 45667777788877776 56689999999998888 99999999999996665
Q ss_pred hHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 026948 153 PIEEKKAARGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 228 (230)
Q Consensus 153 ~~~~~~~~~~lg~~~~~~~--~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~~~ 228 (230)
...++++.+.+....+ +++++++++.+++++. +....+|...+.+....| .+++++++++++++...
T Consensus 106 ---~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d------~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p 175 (567)
T 1dce_A 106 ---SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD------ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 175 (567)
T ss_dssp ---CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC
T ss_pred ---CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc------cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC
Confidence 7889999999999999 7799999999999986 778999999999999999 99999999999987654
No 189
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.64 E-value=1.8e-07 Score=80.99 Aligned_cols=119 Identities=8% Similarity=-0.018 Sum_probs=103.2
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g--~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.++..+.+++...|+ ...+++.++.+....+ +++++++++.+++++.++ ...++
T Consensus 89 ~~~eL~~~~~~l~~~pK----------------~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~------N~~aW 146 (567)
T 1dce_A 89 VKAELGFLESCLRVNPK----------------SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER------NFHCW 146 (567)
T ss_dssp HHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc------cccHH
Confidence 56677777778777766 5668999999999999 779999999999997666 77889
Q ss_pred HHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHH
Q 026948 161 RGLGASLQRQG-KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------------GDLERAARFYDKYIS 225 (230)
Q Consensus 161 ~~lg~~~~~~~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--------------g~~~~A~~~~~~al~ 225 (230)
.+.|.+....| .++++++++.++++.. +....+|++.|.++..+ +.+++|++++++|+.
T Consensus 147 ~~R~~~l~~l~~~~~~el~~~~~~I~~~------p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~ 220 (567)
T 1dce_A 147 DYRRFVAAQAAVAPAEELAFTDSLITRN------FSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 220 (567)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHTTTTTT------CCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHC------CCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHh
Confidence 99999999999 9999999999998875 88899999999999885 668999999999998
Q ss_pred hhhc
Q 026948 226 RLES 229 (230)
Q Consensus 226 ~~~~ 229 (230)
+.+.
T Consensus 221 ~~P~ 224 (567)
T 1dce_A 221 TDPN 224 (567)
T ss_dssp HCSS
T ss_pred hCCC
Confidence 7654
No 190
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.64 E-value=6.7e-08 Score=64.08 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
..++..+|.++...|++++|+.+|+++++.. +....++.++|.++...|++++|+.+|+++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLD------PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 4567889999999999999999999999885 66788999999999999999999999999998754
No 191
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.54 E-value=1e-06 Score=70.36 Aligned_cols=131 Identities=6% Similarity=-0.099 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHH-HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHH
Q 026948 70 VNEQLRQINAAL-RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALEL 146 (230)
Q Consensus 70 l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g--~~~~A~~~~~~al~l 146 (230)
+.+.++...... ..+.++..+.+++...|. ...+++.+|.+....| ++++++..+.+++..
T Consensus 35 ~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~----------------~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~ 98 (306)
T 3dra_A 35 IMGLLLALMKAEEYSERALHITELGINELAS----------------HYTIWIYRFNILKNLPNRNLYDELDWCEEIALD 98 (306)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHCcH----------------HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 333333333333 446677777888887776 5668999999999999 999999999999997
Q ss_pred HHhcCChHHHHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH--HHH
Q 026948 147 AQNVKDPIEEKKAARGLGASL----QRQ---GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE--RAA 217 (230)
Q Consensus 147 ~~~~~~~~~~~~~~~~lg~~~----~~~---~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~--~A~ 217 (230)
.++ ...+.+..+.+. ... ++++++++.+.++++.. |....+|+..+.+...+|.++ +++
T Consensus 99 nPk------~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~------pkny~aW~~R~~vl~~l~~~~~~~EL 166 (306)
T 3dra_A 99 NEK------NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSD------PKNHHVWSYRKWLVDTFDLHNDAKEL 166 (306)
T ss_dssp CTT------CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCTTCHHHH
T ss_pred Ccc------cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhcccChHHHH
Confidence 666 566677777777 666 79999999999999885 778999999999999999999 999
Q ss_pred HHHHHHHHhhh
Q 026948 218 RFYDKYISRLE 228 (230)
Q Consensus 218 ~~~~~al~~~~ 228 (230)
++++++++.-.
T Consensus 167 ~~~~~~i~~d~ 177 (306)
T 3dra_A 167 SFVDKVIDTDL 177 (306)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHhCC
Confidence 99999998644
No 192
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.54 E-value=4.8e-06 Score=59.57 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG---- 191 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~---~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~---- 191 (230)
++..-....+..|.|+.|+-....++.+.+...+ ......++..+|++++..++|..|..+|++|++..+...
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4555666778899999999999999998876444 566788999999999999999999999999998876421
Q ss_pred ---------------CcccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026948 192 ---------------EYSGSTEAYGAIADCYTELGDLERAARFYDK 222 (230)
Q Consensus 192 ---------------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~ 222 (230)
+.+...++.+.++.||.++|++++|+...+.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1223457889999999999999999998764
No 193
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.53 E-value=5.4e-07 Score=75.86 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=62.0
Q ss_pred HHHHHHHHH-H--HhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHH
Q 026948 118 LSRLKTGKN-F--LRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG-----KYREAIKYHSMVLQISER 189 (230)
Q Consensus 118 ~~~~~~g~~-~--~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~-----~~~~Ai~~~~~al~~~~~ 189 (230)
.+++.+|.+ + ...+++++|+.+|+++.+. ..+.+++++|.+|. .| ++++|+.+|+++.
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa----- 314 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--------DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV----- 314 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-----
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-----
Confidence 356667776 3 4567777777777777651 14567777777776 44 7788888877765
Q ss_pred hCCcccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 026948 190 EGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYIS 225 (230)
Q Consensus 190 ~~~~~~~~~~~~~lg~~y~~----~g~~~~A~~~~~~al~ 225 (230)
++.+.+++++|.+|.. ..++++|..+|+++.+
T Consensus 315 ----~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 315 ----GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp ----TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 2345777888877766 4478888888887765
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.52 E-value=4.8e-07 Score=77.41 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH---------------------------
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR--------------------------- 169 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~--------------------------- 169 (230)
...+...|..+...|++++|...|++++++.+. +. ..++.++|..+.+
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--~~---~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~ 395 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI--DP---TLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVT 395 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS--CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc--Cc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHH
Confidence 345667777777888888888888887774322 11 1244444444444
Q ss_pred --------cCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 170 --------QGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 170 --------~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.|++++|...|+++++.. |..+.++..++..+...|+.++|...|++++..
T Consensus 396 ~a~~~~~~~~~~~~A~~~~e~al~~~------p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 396 AALMEYYCSKDKSVAFKIFELGLKKY------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHH------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHC------CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhc
Confidence 455555555555555443 444556666666666666666666666666654
No 195
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.47 E-value=7.6e-07 Score=74.94 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=73.4
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN----QDLEKAFTEFKAALELAQNVKDPIEEK 157 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----g~~~~A~~~~~~al~l~~~~~~~~~~~ 157 (230)
+.+.++..|+++....+. .+..++.+|.+|... +++++|+.+|+++. +. .+
T Consensus 194 ~~~~A~~~~~~aa~~g~~----------------~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g------~~ 248 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTV----------------TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PG------YP 248 (452)
T ss_dssp HHHHHHHHHHHHHHTTCS----------------CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GG------ST
T ss_pred cHHHHHHHHHHHHHCCCH----------------HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CC------CH
Confidence 666777777777765544 233446677777554 67777777777765 22 45
Q ss_pred HHHHHHHHH-H--HHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHH
Q 026948 158 KAARGLGAS-L--QRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-----DLERAARFYDKYI 224 (230)
Q Consensus 158 ~~~~~lg~~-~--~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-----~~~~A~~~~~~al 224 (230)
.+++++|.+ + ...+++++|+++|+++.+. +.+.+++++|.+|. .| ++++|+.+|+++.
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--------DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--------CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 667777777 3 4567777788877777532 35667777777777 55 7777777777765
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=3.3e-07 Score=72.10 Aligned_cols=138 Identities=11% Similarity=-0.029 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhhhhhhhhccccccCCCCCc--ccc--c-CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc
Q 026948 76 QINAALRRQAKIESYAPSLSYAPVGSRIPED--EVI--V-DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 150 (230)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~ 150 (230)
.+....+...++..+++.+...|........ -.+ + -+-...-...+..+..+...|+|++|.+.+...+.
T Consensus 56 ~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~----- 130 (282)
T 4f3v_A 56 TLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV----- 130 (282)
T ss_dssp HHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC-----
T ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh-----
Confidence 3333345566667777777776653211111 000 0 00111222456678999999999999999987765
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 151 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG-STEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 151 ~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~-~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
..+... ..+.+|.++.+.+++++|+.+|+++.... ++. ...+++++|.++..+|++++|+.+|++++.
T Consensus 131 -~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-----d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 131 -AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWP-----DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp -TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred -cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccC-----CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 223345 88999999999999999999999764431 122 246899999999999999999999999973
No 197
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.44 E-value=5.1e-07 Score=77.26 Aligned_cols=98 Identities=11% Similarity=0.073 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHh-------CCCHH-------HHHHHHHHHHH-HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 117 LLSRLKTGKNFLR-------NQDLE-------KAFTEFKAALE-LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHS 181 (230)
Q Consensus 117 ~~~~~~~g~~~~~-------~g~~~-------~A~~~~~~al~-l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~ 181 (230)
...++..|..+.. .|+++ +|...|+++++ +.+. ....+..+|..+...|++++|...|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~------~~~l~~~~~~~~~~~g~~~~A~~~~~ 345 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK------NMLLYFAYADYEESRMKYEKVHSIYN 345 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS------CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc------cHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4567788888875 79987 88999999986 4333 56788899999999999999999999
Q ss_pred HHHHHHHHhCCcccH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 182 MVLQISEREGEYSGS-TEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 182 ~al~~~~~~~~~~~~-~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+++++. |.. ..+|.+.|.++...|++++|+..|++|++.
T Consensus 346 ~al~~~------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 346 RLLAIE------DIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp HHHHSS------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCcc------ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 999863 433 368999999888888888888888888764
No 198
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.36 E-value=1.2e-05 Score=64.69 Aligned_cols=120 Identities=8% Similarity=-0.008 Sum_probs=100.2
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g--~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+..+..+...+...|+ ...++..++.+....+ ++++++.++.++++..++ +..+.
T Consensus 90 l~~EL~~~~~~L~~~PK----------------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr------Ny~AW 147 (331)
T 3dss_A 90 VKAELGFLESCLRVNPK----------------SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER------NFHCW 147 (331)
T ss_dssp HHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC------CHHHH
Confidence 34455556666666665 4568999999999988 499999999999997666 77888
Q ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHH
Q 026948 161 RGLGASLQRQGK-YREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------------GDLERAARFYDKYIS 225 (230)
Q Consensus 161 ~~lg~~~~~~~~-~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--------------g~~~~A~~~~~~al~ 225 (230)
++.+.+....|. ++++++++.++++.. |.+..+|++.+.+...+ +.++++++++++++.
T Consensus 148 ~~R~~vl~~l~~~~~eel~~~~~~I~~~------p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 148 DYRRFVAAQAAVAPAEELAFTDSLITRN------FSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHC------SCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 899999999998 699999999999885 88899999999999887 568999999999998
Q ss_pred hhhcC
Q 026948 226 RLESD 230 (230)
Q Consensus 226 ~~~~~ 230 (230)
..+.|
T Consensus 222 ~~P~d 226 (331)
T 3dss_A 222 TDPND 226 (331)
T ss_dssp HSTTC
T ss_pred hCCCC
Confidence 76653
No 199
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.34 E-value=5.7e-06 Score=77.27 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh------
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE------ 190 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~------ 190 (230)
..+++.+|..+...|++++|+++|.++- ....+..+|.++.+.|+|++|+++|+.|.+..+..
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKAd-----------D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~L 1173 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKAD-----------DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETEL 1173 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhcC-----------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHH
Confidence 3478899999999999999999998761 46678889999999999999999998877544110
Q ss_pred ----------------CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 191 ----------------GEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 191 ----------------~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
-..+ ....+.++|..+...|+|++|..+|+++-.
T Consensus 1174 afaYAKl~rleele~fI~~~-n~ad~~~iGd~le~eg~YeeA~~~Y~kA~n 1223 (1630)
T 1xi4_A 1174 IFALAKTNRLAELEEFINGP-NNAHIQQVGDRCYDEKMYDAAKLLYNNVSN 1223 (1630)
T ss_pred HHHHHhhcCHHHHHHHHhCC-CHHHHHHHHHHHHhcCCHHHHHHHHHhhhH
Confidence 0112 223566799999999999999999988754
No 200
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.33 E-value=3.5e-06 Score=59.80 Aligned_cols=69 Identities=14% Similarity=0.083 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQG---KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~---~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...+.+++|.++.+.+ +.++++..++..++.. .+....++++++|..|.++|+|++|+.++++++++-+
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 5577888888888877 6668998888887752 1125678888999999999999999999998888654
No 201
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.31 E-value=3.1e-06 Score=55.18 Aligned_cols=64 Identities=14% Similarity=-0.003 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 157 KKAARGLGASLQRQGK---YREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~---~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+..+..+|.+++..++ .++|...+++++++. |..+.++..+|..+...|+|++|+.+|+++++.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d------p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE------PYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC------cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3455556666654444 566777777766664 666666666677777777777777777666653
No 202
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.29 E-value=4.4e-06 Score=66.66 Aligned_cols=101 Identities=8% Similarity=-0.029 Sum_probs=86.8
Q ss_pred HHHHHHHHHHH----HhC---CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHH
Q 026948 117 LLSRLKTGKNF----LRN---QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYR--EAIKYHSMVLQIS 187 (230)
Q Consensus 117 ~~~~~~~g~~~----~~~---g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~Ai~~~~~al~~~ 187 (230)
..+++.++.+. ... +++++++..+.++++..++ ...+.++.+.+....|.++ ++++++.++++..
T Consensus 103 y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk------ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d 176 (306)
T 3dra_A 103 YQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK------NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTD 176 (306)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhC
Confidence 44678888887 666 7899999999999996665 7788899999999999998 9999999999885
Q ss_pred HHhCCcccHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhhhc
Q 026948 188 EREGEYSGSTEAYGAIADCYTELGD------LERAARFYDKYISRLES 229 (230)
Q Consensus 188 ~~~~~~~~~~~~~~~lg~~y~~~g~------~~~A~~~~~~al~~~~~ 229 (230)
+.+..+|++.+.+....++ ++++++++++++...+.
T Consensus 177 ------~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~ 218 (306)
T 3dra_A 177 ------LKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQ 218 (306)
T ss_dssp ------TTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSS
T ss_pred ------CCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCC
Confidence 7788999999999999888 99999999999986554
No 203
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.28 E-value=1.4e-05 Score=64.44 Aligned_cols=102 Identities=9% Similarity=-0.013 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQD----------LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG--KYREAIKYHSMV 183 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~--~~~~Ai~~~~~a 183 (230)
...+++.++.+....++ +++++.++.+++...++ ...+.++.+.+....+ +++++++++.++
T Consensus 63 ~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 63 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK------SYGTWHHRCWLLSRLPEPNWARELELCARF 136 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 45578888888776655 67888999999886555 7788899999999988 499999999999
Q ss_pred HHHHHHhCCcccHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhhhc
Q 026948 184 LQISEREGEYSGSTEAYGAIADCYTELGD-LERAARFYDKYISRLES 229 (230)
Q Consensus 184 l~~~~~~~~~~~~~~~~~~lg~~y~~~g~-~~~A~~~~~~al~~~~~ 229 (230)
++.. |.+..+|...+.+....|. +++++++++++++..+.
T Consensus 137 l~~d------prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~ 177 (331)
T 3dss_A 137 LEAD------ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 177 (331)
T ss_dssp HHHC------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC
T ss_pred HHhC------CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC
Confidence 9985 8889999999999999999 69999999999986543
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.27 E-value=1.8e-06 Score=60.58 Aligned_cols=78 Identities=27% Similarity=0.339 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH-
Q 026948 131 QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE- 209 (230)
Q Consensus 131 g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~- 209 (230)
+++++|+.+|+++.+.- .+.+. +|.+|...+.+++|+++|+++.+. +.+.+++++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g--------~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G 70 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN--------EMFGC--LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENG 70 (138)
T ss_dssp HHHHHHHHHHHHHHHTT--------CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcCC--------CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcC
Confidence 47899999999998732 12233 999999999999999999999764 357899999999999
Q ss_pred ---cCCHHHHHHHHHHHHHh
Q 026948 210 ---LGDLERAARFYDKYISR 226 (230)
Q Consensus 210 ---~g~~~~A~~~~~~al~~ 226 (230)
.+|+++|+.+|+++.+.
T Consensus 71 ~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 71 KYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHcC
Confidence 99999999999999864
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.22 E-value=1.3e-05 Score=65.06 Aligned_cols=124 Identities=13% Similarity=0.023 Sum_probs=85.0
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEK 157 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~A~~~~~~al~l~~~~~~~~~~~ 157 (230)
....++..+.+++...|. .+.++-.++.+|.. ...-.........++.........+..+
T Consensus 214 ~~~~A~~l~e~Al~lDP~----------------~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 214 SLNRASELLGEIVQSSPE----------------FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH
Confidence 345667778888887775 23333333444321 1111222233344444333333444567
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 158 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 158 ~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
.++..++..+...|++++|+.++++|+.+. + ...+|..+|.++...|++++|++.|++|+.+-+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~Ln------~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDLE------M-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhcC------C-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 788889988988999999999999999994 3 356788999999999999999999999998754
No 206
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.20 E-value=4.4e-06 Score=67.72 Aligned_cols=119 Identities=9% Similarity=0.005 Sum_probs=101.2
Q ss_pred HHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 82 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ-DLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
..+.++..+.+++...|. ...+++.++.+....| ++++++..+.+++...++ ...+.
T Consensus 69 ~se~AL~lt~~~L~~nP~----------------~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK------ny~aW 126 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPA----------------HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK------SYQVW 126 (349)
T ss_dssp CSHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC------CHHHH
T ss_pred CCHHHHHHHHHHHHhCch----------------hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC------cHHHH
Confidence 445677777778877776 5568999999999999 599999999999985554 77888
Q ss_pred HHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHhhh
Q 026948 161 RGLGASLQRQ-G-KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE--------RAARFYDKYISRLE 228 (230)
Q Consensus 161 ~~lg~~~~~~-~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~--------~A~~~~~~al~~~~ 228 (230)
+..+.+.... + +++++++++.++++.. |.+..+|...+.+....|.++ +++++++++++.-.
T Consensus 127 ~hR~wlL~~l~~~~~~~EL~~~~k~L~~d------pkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp 198 (349)
T 3q7a_A 127 HHRLLLLDRISPQDPVSEIEYIHGSLLPD------PKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDG 198 (349)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHTSSC------TTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCC
Confidence 9999999887 7 9999999999998764 778899999999999999888 99999999998654
No 207
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.19 E-value=2.1e-05 Score=73.56 Aligned_cols=94 Identities=17% Similarity=0.142 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc-------------CChHH--------HHHHHHHHHHHHHHcCCHHHH
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-------------KDPIE--------EKKAARGLGASLQRQGKYREA 176 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-------------~~~~~--------~~~~~~~lg~~~~~~~~~~~A 176 (230)
..+...|.++...|+|++|+++|..+.+..+.. +.... ....+.++|..+...|+|++|
T Consensus 1135 say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA 1214 (1630)
T 1xi4_A 1135 SSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAA 1214 (1630)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHH
Confidence 367789999999999999999998877543110 11011 122467899999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 177 IKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 177 i~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
+.+|.++ ..|..+|.++.++|++++|++.+++|.+
T Consensus 1215 ~~~Y~kA--------------~ny~rLA~tLvkLge~q~AIEaarKA~n 1249 (1630)
T 1xi4_A 1215 KLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANS 1249 (1630)
T ss_pred HHHHHhh--------------hHHHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 9999995 3688999999999999999999999854
No 208
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.15 E-value=1.1e-05 Score=52.48 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHhCCC---HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 117 LLSRLKTGKNFLRNQD---LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~---~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
...+..+|..++..++ .++|...+++++++.+. ..+++..+|..++..|+|++|+.+++++++.... .
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~------~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~---~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY------NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP---N 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT---T
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---C
Confidence 3456777888876555 79999999999997766 8899999999999999999999999998776422 3
Q ss_pred ccHHHHHHHHHH
Q 026948 194 SGSTEAYGAIAD 205 (230)
Q Consensus 194 ~~~~~~~~~lg~ 205 (230)
+.....-..+..
T Consensus 77 ~~~~~i~~~I~~ 88 (93)
T 3bee_A 77 LDRVTIIESINK 88 (93)
T ss_dssp CCHHHHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 344444444443
No 209
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.03 E-value=9.4e-06 Score=65.76 Aligned_cols=119 Identities=8% Similarity=-0.054 Sum_probs=96.9
Q ss_pred HHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhC-C-CHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 83 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-Q-DLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-g-~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
.+.++..+.+.+...|+ ...+++.++.+.... + ++++++.++.++++..++ ...+.
T Consensus 105 l~eEL~~~~~~L~~nPK----------------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk------Ny~AW 162 (349)
T 3q7a_A 105 LEDELRLMNEFAVQNLK----------------SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK------NYHTW 162 (349)
T ss_dssp HHHHHHHHHHHHHTTCC----------------CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC------CHHHH
Confidence 34455555555555554 455788999998887 7 899999999999985444 67788
Q ss_pred HHHHHHHHHcCCHH--------HHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHH
Q 026948 161 RGLGASLQRQGKYR--------EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD-------LERAARFYDKYIS 225 (230)
Q Consensus 161 ~~lg~~~~~~~~~~--------~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~-------~~~A~~~~~~al~ 225 (230)
+..+.+....|.++ +++++++++++.. +.+..+|++.+.+...+++ ++++++++++++.
T Consensus 163 ~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d------p~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~ 236 (349)
T 3q7a_A 163 AYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVD------GRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIH 236 (349)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 88888888888887 9999999999985 7889999999999999987 7999999999998
Q ss_pred hhhc
Q 026948 226 RLES 229 (230)
Q Consensus 226 ~~~~ 229 (230)
..+.
T Consensus 237 ~~P~ 240 (349)
T 3q7a_A 237 LIPH 240 (349)
T ss_dssp HCTT
T ss_pred hCCC
Confidence 7654
No 210
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.01 E-value=3.2e-05 Score=60.66 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHh---C--CC------HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc-----CCHHHHHHH
Q 026948 116 ELLSRLKTGKNFLR---N--QD------LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQ-----GKYREAIKY 179 (230)
Q Consensus 116 ~~~~~~~~g~~~~~---~--g~------~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~-----~~~~~Ai~~ 179 (230)
.+..+++.|..... . |. .+.|...+++++++.++ .....++..+|..|... |+.++|..+
T Consensus 151 dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~----~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 151 DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPS----YQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTT----HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCC----cccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 45566666665532 2 32 56778888899987544 44677899999999995 999999999
Q ss_pred HHHHHHHHHHhCCccc-HHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhhh
Q 026948 180 HSMVLQISEREGEYSG-STEAYGAIADCYTE-LGDLERAARFYDKYISRLE 228 (230)
Q Consensus 180 ~~~al~~~~~~~~~~~-~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~~ 228 (230)
|++|+++. |+ ...+++..|..+.. .|+++.|..+++++++.-.
T Consensus 227 ferAL~Ln------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p 271 (301)
T 3u64_A 227 FEHLTRYC------SAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDP 271 (301)
T ss_dssp HHHHHHHC------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCG
T ss_pred HHHHHHhC------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCC
Confidence 99999996 64 48899999999987 5999999999999998643
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.00 E-value=0.00011 Score=52.14 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhCC---CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 117 LLSRLKTGKNFLRNQ---DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g---~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
..+.++.|+++.... +.++++..++..++.. .+.....+++++|..+++.|+|++|.+++++++++.
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~----~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie------ 101 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE------ 101 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS----CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC------
Confidence 347888899999988 6679999999988832 133578899999999999999999999999999996
Q ss_pred ccHHHHHHH
Q 026948 194 SGSTEAYGA 202 (230)
Q Consensus 194 ~~~~~~~~~ 202 (230)
|....+...
T Consensus 102 P~n~QA~~L 110 (152)
T 1pc2_A 102 PQNNQAKEL 110 (152)
T ss_dssp TTCHHHHHH
T ss_pred CCCHHHHHH
Confidence 655554443
No 212
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.92 E-value=7.4e-06 Score=68.25 Aligned_cols=94 Identities=11% Similarity=0.155 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH--HH-------
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS--ER------- 189 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~--~~------- 189 (230)
++..+|..++..|+|++|..+|.++ ..+..+|.++.+.|+|++|++.++++.... +.
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHH
Confidence 7888999999999999999999865 357788999999999999999999983221 00
Q ss_pred hC----------CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 190 EG----------EYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 190 ~~----------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.+ .-...++-...+...|...|++++|+.++++++..
T Consensus 190 ~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 190 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp TTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred cCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 00 00011122233557899999999999999998753
No 213
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.88 E-value=0.00059 Score=56.13 Aligned_cols=108 Identities=6% Similarity=-0.105 Sum_probs=92.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-CCcccHHH
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE-GEYSGSTE 198 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~-~~~~~~~~ 198 (230)
...+|..|+..|+|.+|...+.+.++..++..+.......+..-..+|...+++.++...+.+|....... .++.-.+.
T Consensus 102 ~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 102 EARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 34789999999999999999999999998888888888889999999999999999999999998887655 33334555
Q ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHhh
Q 026948 199 AYGAIADCYT-ELGDLERAARFYDKYISRL 227 (230)
Q Consensus 199 ~~~~lg~~y~-~~g~~~~A~~~~~~al~~~ 227 (230)
....-|..+. ..++|..|..+|-++..-+
T Consensus 182 i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 182 LDLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 6677789999 8999999999998887654
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.86 E-value=0.00027 Score=56.19 Aligned_cols=123 Identities=10% Similarity=-0.040 Sum_probs=80.5
Q ss_pred HHHHHHhhhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 026948 81 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 160 (230)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~ 160 (230)
++.+.++..+.+.+...+. .....+....+.++..+|+.+.|...+++..+..+..-.........
T Consensus 114 g~~eeAL~~l~~~i~~~~~--------------~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~ 179 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEA--------------EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILN 179 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCS--------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCC--------------cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHH
Confidence 3556666666665544331 12455677889999999999999999998776422000001122233
Q ss_pred HHHHHHHHHcC--CHHHHHHHHHHHHHHHHHhCCccc--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 161 RGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSG--STEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 161 ~~lg~~~~~~~--~~~~Ai~~~~~al~~~~~~~~~~~--~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
..-|.+....| ++++|...|++..+.. |. ....+++ ++..+|++++|...+++.++.
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~------p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTF------PTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTS------CSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhC------CCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 33354566666 9999999999964432 32 2344555 899999999999999977665
No 215
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.83 E-value=0.00042 Score=49.56 Aligned_cols=89 Identities=10% Similarity=0.160 Sum_probs=66.7
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChH-------------------HHHHHHHHHHHHHHHcCC
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPI-------------------EEKKAARGLGASLQRQGK 172 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~-------------------~~~~~~~~lg~~~~~~~~ 172 (230)
.....+.++...|..++.+++|.+|...|++++++.+.....+ ...+..+.++.|+...++
T Consensus 58 sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~ 137 (167)
T 3ffl_A 58 SPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQ 137 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCC
Confidence 3455777888999999999999999999999999887543222 123678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHH
Q 026948 173 YREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 207 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 207 (230)
+++|+..++.. . .....+.+...||..|
T Consensus 138 ~~~Ai~~Le~I---p----~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 138 DKDAIAILDGI---P----SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHHHTS---C----GGGCCHHHHHHHHHHC
T ss_pred HHHHHHHHhcC---C----chhcCHHHHHHHHHHh
Confidence 99999998762 1 1123455666677665
No 216
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.78 E-value=0.00023 Score=56.67 Aligned_cols=100 Identities=6% Similarity=-0.064 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCccc---
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--- 195 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~--- 195 (230)
++..+|.++...|++++|+.++.+++...+ ......++.-++.++...|+++.|.+.+++..+.. ++
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~----~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~------~d~~~ 171 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDE----AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAI------EDTVS 171 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSC----STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCC----CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC------ccccc
Confidence 456899999999999999999999876211 12467788888999999999999999999986663 31
Q ss_pred -HHHHHHHH--HHHHHHcC--CHHHHHHHHHHHHHhhh
Q 026948 196 -STEAYGAI--ADCYTELG--DLERAARFYDKYISRLE 228 (230)
Q Consensus 196 -~~~~~~~l--g~~y~~~g--~~~~A~~~~~~al~~~~ 228 (230)
.-....++ |++....| ++++|...|++..+.++
T Consensus 172 ~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p 209 (310)
T 3mv2_B 172 GDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFP 209 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSC
T ss_pred cchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCC
Confidence 22344455 44466667 99999999999876553
No 217
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.47 E-value=1.9e-05 Score=65.79 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
....++.+|.+.|++.++.++++. + ...++.++|..+...|+|++|+.+|.++ .
T Consensus 96 i~~~Li~~Y~Klg~l~e~e~f~~~-----------p-n~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~ 149 (449)
T 1b89_A 96 VETELIFALAKTNRLAELEEFING-----------P-NNAHIQQVGDRCYDEKMYDAAKLLYNNV--------------S 149 (449)
T ss_dssp -------------CHHHHTTTTTC-----------C-----------------CTTTHHHHHHHT--------------T
T ss_pred hHHHHHHHHHHhCCHHHHHHHHcC-----------C-cHHHHHHHHHHHHHcCCHHHHHHHHHHh--------------h
Confidence 455667777777888777766642 1 2238999999999999999999999975 3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
.|..+|.++..+|+|++|.+.|+++.+
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~~ 176 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKANS 176 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcCC
Confidence 688999999999999999999999843
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.18 E-value=0.0012 Score=45.04 Aligned_cols=69 Identities=13% Similarity=0.050 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQGKYRE---AIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~---Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...+.+++|.++.+..+... +|..++..++-. ++...-++++.+|..+.++|+|++|..+.+..|++-+
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~----~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG----SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC----CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 44667777777777766665 777776654321 1124667788888888888888888888888777543
No 219
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.18 E-value=0.022 Score=47.66 Aligned_cols=113 Identities=10% Similarity=0.002 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
..+.....++.+|...|++.+|.........-.....+.......+......+...+|+.+|...++++..........+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 34555678999999999999999999887765555567777888888889999999999999999999854333333323
Q ss_pred -cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 195 -GSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 195 -~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.....+...|..+...++|.+|-.+|..+...+
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence 345667788999999999999999999887654
No 220
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.03 E-value=0.0015 Score=51.25 Aligned_cols=74 Identities=15% Similarity=0.008 Sum_probs=61.5
Q ss_pred ccCccHHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Q 026948 109 IVDPKKEELLSRLKTGKNFLRN-----QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR-QGKYREAIKYHSM 182 (230)
Q Consensus 109 ~~~~~~~~~~~~~~~g~~~~~~-----g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~-~~~~~~Ai~~~~~ 182 (230)
.+++...+..++..+|..|... |+.++|..+|++++++.+.. ....++..|..++. .|++++|.+++++
T Consensus 191 eLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~-----~id~~v~YA~~l~~~~gd~~~a~~~L~k 265 (301)
T 3u64_A 191 DLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH-----DPDHHITYADALCIPLNNRAGFDEALDR 265 (301)
T ss_dssp HHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT-----CSHHHHHHHHHTTTTTTCHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC-----CchHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4466666777888999999985 99999999999999987651 25667788888887 5999999999999
Q ss_pred HHHHH
Q 026948 183 VLQIS 187 (230)
Q Consensus 183 al~~~ 187 (230)
++...
T Consensus 266 AL~a~ 270 (301)
T 3u64_A 266 ALAID 270 (301)
T ss_dssp HHHCC
T ss_pred HHcCC
Confidence 99875
No 221
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.02 E-value=0.0036 Score=50.88 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHhCCC---HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQD---LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQ----GKYREAIKYHSMVLQISE 188 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~---~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~----~~~~~Ai~~~~~al~~~~ 188 (230)
.++.++..|..+...++ +.+|+.+|++++++.+. .+.++..++.++... ........-..+++....
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~------~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~ 268 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE------FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV 268 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH
Confidence 44556666766665544 57999999999997766 556666666665421 111223333444444333
Q ss_pred HhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 189 REGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 189 ~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.....+..+.++..+|..+...|++++|+.++++|+.+.
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE 307 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 333446678899999999999999999999999999874
No 222
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0063 Score=50.74 Aligned_cols=106 Identities=9% Similarity=0.048 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
+...+|..|...|++++|...|.+........+. ....+...-.++...+++..+..+..++-.+....++......
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~---kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA---KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH---HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 4567999999999999999999998876544322 4566777778889999999999999999887766665555556
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
....-|..+...++|..|..+|-.+...+
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 66777888999999999999998876544
No 223
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.88 E-value=0.051 Score=37.00 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhCCCHHH---HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEK---AFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~---A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
+.++.|+.+....+... ++..++..++ . ..+.....+++.+|..+++.|+|++|..+++..+++.
T Consensus 37 ~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~---~-~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~e 104 (126)
T 1nzn_A 37 TQFEYAWCLVRTRYNDDIRKGIVLLEELLP---K-GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 104 (126)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTT---T-SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---c-CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence 67788888888877665 6666666554 1 1234678899999999999999999999999999985
No 224
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.71 E-value=0.19 Score=41.20 Aligned_cols=98 Identities=15% Similarity=0.087 Sum_probs=79.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH
Q 026948 130 NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 209 (230)
Q Consensus 130 ~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 209 (230)
-+..+.-++...+.++-+++-.-.......-..+|..|+..|+|.+|.+.+.+.++-.++.++.....+++......|..
T Consensus 72 ~~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~ 151 (394)
T 3txn_A 72 DAGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA 151 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 35666667777777776665333333444566899999999999999999999988887777777888899999999999
Q ss_pred cCCHHHHHHHHHHHHHhh
Q 026948 210 LGDLERAARFYDKYISRL 227 (230)
Q Consensus 210 ~g~~~~A~~~~~~al~~~ 227 (230)
++++.++...|.+|....
T Consensus 152 ~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 152 LSNLPKARAALTSARTTA 169 (394)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhhh
Confidence 999999999999997765
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.58 E-value=0.034 Score=49.10 Aligned_cols=106 Identities=8% Similarity=0.002 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh--------cCC--------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN--------VKD--------PIEEKKAARGLGASLQRQGKYREAIKYHSM 182 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~--------~~~--------~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~ 182 (230)
.++..+......|++++|...|++++..... .+. .......+...+....+.|+.+.|...|.+
T Consensus 380 Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~ 459 (679)
T 4e6h_A 380 LAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGK 459 (679)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4556677778899999999999999985421 111 011333555666666778888899999998
Q ss_pred HHHHHHHhCCcccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhhc
Q 026948 183 VLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLES 229 (230)
Q Consensus 183 al~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~~~~ 229 (230)
|++.. .+.....|...+......+ +++.|...|+++++.++.
T Consensus 460 A~~~~-----~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 460 CRRLK-----KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHTG-----GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred HHHhc-----CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 87651 1222345555566555544 478888888888876653
No 226
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.49 E-value=0.032 Score=38.23 Aligned_cols=66 Identities=15% Similarity=0.123 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 157 KKAARGLGASLQRQGKY---REAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~---~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
..+.++++.++.+..+. .++|..++..++.. +...-++++.+|..+.++|+|++|..+.+..+++-
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~-----~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA-----ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-----GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-----cchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 45666666666665543 35777776655432 23466778888888888888888888888777654
No 227
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.35 E-value=0.05 Score=37.78 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 157 KKAARGLGASLQRQGKYR---EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~---~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
..+.++++.++.+..+.. ++|..++..++. ++...-++++.+|..+.++|+|++|..+.+..|++
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 344555555555544332 355555554432 11234556666666666666666666666665554
No 228
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.24 E-value=0.12 Score=37.16 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=69.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH--HHHHH--------
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVL--QISER-------- 189 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al--~~~~~-------- 189 (230)
.+.++...+-.|.|..++..+.+.- .+.+.+.-..|+...++|..|+..+++.+ ++.+.
T Consensus 36 ~lL~~I~LyyngEY~R~Lf~L~~lN-----------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~ 104 (242)
T 3kae_A 36 RMLMSIVLYLNGEYTRALFHLHKLN-----------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQ 104 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCC-----------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHH
T ss_pred HhhhhhhhhhcchHhHHHHHHHhcc-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccc
Confidence 3446778888999988877654322 24455666779999999999999999987 22211
Q ss_pred --hCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 190 --EGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 190 --~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.-++.+..--+..+|......|+.++|+.+|.+...+
T Consensus 105 ~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 105 EMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp TTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 1122344456778899999999999999999887654
No 229
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.16 E-value=0.038 Score=48.78 Aligned_cols=103 Identities=11% Similarity=0.004 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-------
Q 026948 118 LSRLKTGKNFLRNQDLEKAF-TEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER------- 189 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~-~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~------- 189 (230)
..++..+......|+.++|. ..|.+|+...+. ....+...+......|++++|.+.|++++.....
T Consensus 344 ~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~------s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~ 417 (679)
T 4e6h_A 344 EIWFNMANYQGEKNTDSTVITKYLKLGQQCIPN------SAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALME 417 (679)
T ss_dssp HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 35667777777888888997 999999985543 3345666778888899999999999999976311
Q ss_pred -hCC--------cccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 190 -EGE--------YSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 190 -~~~--------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.+. ......+|...+......|+.+.|...|.+|++.
T Consensus 418 ~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 418 DDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred ccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 010 0024557888888888999999999999999875
No 230
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.08 E-value=0.021 Score=48.37 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.+++..+|++.+....++.|..+|.+|..+. |.....|+.||.+....|+.-+|..+|-+++..
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~------P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLV------PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhC------CCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 3567889999999999999999999999986 778889999999999999999999999998753
No 231
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.93 E-value=0.095 Score=42.94 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh-----cCC-hH----------HHHHHHHHHHHHHHHcCCHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN-----VKD-PI----------EEKKAARGLGASLQRQGKYREAIKY 179 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~-----~~~-~~----------~~~~~~~~lg~~~~~~~~~~~Ai~~ 179 (230)
........|......|+.+.|...+.+++.++.. ..+ .+ ....+...++..+...|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 3444455566666789999999999999987642 111 11 1123455677788899999999999
Q ss_pred HHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 180 HSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 180 ~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
+.+.+... |.....+..+..++...|+..+|+..|++.-+..
T Consensus 194 l~~~~~~~------P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L 235 (388)
T 2ff4_A 194 LEALTFEH------PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTL 235 (388)
T ss_dssp HHHHHHHS------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 99998885 7788899999999999999999999999987654
No 232
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.91 E-value=0.094 Score=44.53 Aligned_cols=97 Identities=9% Similarity=0.058 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
++..+-..|...|++++|...+.+..+. +-.+ ....|..+-..+.+.|+.++|.+.|++-.+. +-.| ...
T Consensus 107 tyn~lI~~~~~~g~~~~A~~l~~~M~~~----g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----G~~P-d~~ 176 (501)
T 4g26_A 107 TFTNGARLAVAKDDPEMAFDMVKQMKAF----GIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVES----EVVP-EEP 176 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----TCCC-CHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhc----CCCC-CHH
Confidence 5666777888899999999999886651 1111 3456777778899999999999999985432 2333 567
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
+|..+-.+|.+.|+.++|.+.+++.-+
T Consensus 177 ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 177 ELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 899999999999999999999988754
No 233
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.90 E-value=0.028 Score=47.69 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=66.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 198 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~ 198 (230)
.+..+|.+.+....++.|..+|.+|..+.+. ....++.||.+....|+.-+|+-+|-+++... ...+.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~------~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~------~Pf~~ 221 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS------NGQPYNQLAILASSKGDHLTTIFYYCRSIAVK------FPFPA 221 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS------BCCHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC------CCchHHHHHHHHhcccccHHHHHHHHHHHhcC------CCChh
Confidence 4558999999999999999999999998877 77889999999999999999999999998653 33566
Q ss_pred HHHHHHHHHHH
Q 026948 199 AYGAIADCYTE 209 (230)
Q Consensus 199 ~~~~lg~~y~~ 209 (230)
+..|+...+..
T Consensus 222 a~~nL~~~f~~ 232 (497)
T 1ya0_A 222 ASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67777666654
No 234
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.1 Score=46.49 Aligned_cols=57 Identities=18% Similarity=0.185 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
.+..-+..+..+|+|+-|+++.++|+... |....+|+.|+.+|..+|+|+.|+-..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a------PseF~tW~~La~vYi~l~d~e~ALLtLN 395 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELA------LDSFESWYNLARCHIKKEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC------SSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcC------chhhHHHHHHHHHHHHhccHHHHHHHHh
Confidence 45555677778999999999999999996 8899999999999999999999997654
No 235
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.80 E-value=0.2 Score=34.28 Aligned_cols=64 Identities=13% Similarity=0.197 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhCCCH---HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDL---EKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~---~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
+.++.|+.+....+. .+++..++..++. ++.....+++.++..+.+.|+|++|.++.+..+++.
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-----~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 566777777766554 4677777766652 233478899999999999999999999999998875
No 236
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.50 E-value=0.24 Score=34.39 Aligned_cols=64 Identities=13% Similarity=0.218 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhCCCHH---HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLE---KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~---~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
+.++.|+++....+.+ +++..++..+. . ++.....+++.++..+++.|+|++|.++.+..+++.
T Consensus 41 t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~---~--~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 41 SRFNYAWGLIKSTDVNDERLGVKILTDIYK---E--AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp HHHHHHHHHHHSSSHHHHHHHHHHHHHHHH---H--CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHh---c--CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 6777788887776554 56667776665 2 222467889999999999999999999999999885
No 237
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.41 E-value=0.11 Score=36.44 Aligned_cols=102 Identities=14% Similarity=0.082 Sum_probs=71.3
Q ss_pred HHHHHHHHHhCCCH------HHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC
Q 026948 120 RLKTGKNFLRNQDL------EKAFTEFKAALELAQNVK--DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG 191 (230)
Q Consensus 120 ~~~~g~~~~~~g~~------~~A~~~~~~al~l~~~~~--~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~ 191 (230)
+..........|+. ++-.+.|++|+.-.+-.. .-......+...+. +...+|.++|.+.|+.++.+.
T Consensus 16 W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~h---- 90 (161)
T 4h7y_A 16 WLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARANC---- 90 (161)
T ss_dssp HHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHHC----
T ss_pred HHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHh----
Confidence 44333444444777 788888999887554321 11112223333332 356689999999999999873
Q ss_pred CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 192 EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 192 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...+.+|...|.--..+|+.++|...+.+|+.+..
T Consensus 91 --KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 91 --KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp --TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 23488999999999999999999999999998654
No 238
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.10 E-value=1.2 Score=37.04 Aligned_cols=83 Identities=14% Similarity=0.028 Sum_probs=66.5
Q ss_pred CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH-HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026948 111 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA-QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER 189 (230)
Q Consensus 111 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~-~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~ 189 (230)
.+....+..++.....|...+|+.+|...+.++.... ....++......+...|..+...++|.+|-.+|..++.....
T Consensus 171 ~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 171 MEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 4455667777888899999999999999999986544 444455667888888999999999999999999999887655
Q ss_pred hCCc
Q 026948 190 EGEY 193 (230)
Q Consensus 190 ~~~~ 193 (230)
.++.
T Consensus 251 ~~d~ 254 (445)
T 4b4t_P 251 KSDE 254 (445)
T ss_dssp HSCH
T ss_pred cCCH
Confidence 4443
No 239
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=94.51 E-value=1.3 Score=35.03 Aligned_cols=102 Identities=12% Similarity=-0.014 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhCC-cccH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGK-YREAIKYHSMVLQISEREGE-YSGS 196 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~-~~~Ai~~~~~al~~~~~~~~-~~~~ 196 (230)
.++.-+..+.+.|++..|.+...-.++.+.+.+.... ......+..++..... -.+=.+..+++++...+.++ ..+.
T Consensus 55 lL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~-~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gd 133 (312)
T 2wpv_A 55 LISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD-DISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGD 133 (312)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS-HHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCC
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCC
Confidence 3445566677788888888876666776666443332 2234445555444221 12346777888888877655 5578
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 197 TEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
+..+..+|..|.+.|++.+|..+|-
T Consensus 134 p~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 134 PYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 8999999999999999999999884
No 240
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.37 E-value=0.62 Score=39.36 Aligned_cols=104 Identities=7% Similarity=-0.157 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh----------------------------------HHHHHHHHH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP----------------------------------IEEKKAARG 162 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~----------------------------------~~~~~~~~~ 162 (230)
...++..+..+...|+.++|...|++|+.. +....- ......+..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 335666777788899999999999999987 542100 001112233
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 228 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~~~ 228 (230)
.+....+.++.+.|...|++| .. ++.....|...+......+ +.+.|...|+++++.++
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~------~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~ 351 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GN------EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHP 351 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TT------SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hC------CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCC
Confidence 333344567788888888888 21 1223456666666655555 69999999999987654
No 241
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.32 E-value=0.091 Score=44.53 Aligned_cols=108 Identities=9% Similarity=-0.027 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhCCCHHHHH----------HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAF----------TEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE 188 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~----------~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~ 188 (230)
.++..+..+...|+..... ..+..+++.+--..|....+..+..+-..|...+.|++|.....++. +.+
T Consensus 183 ~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~-fP~ 261 (523)
T 4b4t_S 183 LWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE-YPH 261 (523)
T ss_dssp --------------------CHHHHHHHHTHHHHHHHHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC-SCT
T ss_pred HHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc-CCc
Confidence 3444455555556554422 12333443333334566677778888899999999999999999873 211
Q ss_pred HhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 189 REGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 189 ~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
...........++.+|.++.-+++|.+|.+++..|+...
T Consensus 262 ~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 262 TDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred ccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 111122346668889999999999999999999998754
No 242
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.85 E-value=0.21 Score=41.49 Aligned_cols=70 Identities=17% Similarity=0.021 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...++..+|..|.+.|++++|.+.|.+...... ......+.+..+-.++...+|+..+..+++++-....
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~---~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~ 199 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAI---STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE 199 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHT---CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh
Confidence 456788999999999999999999999866542 2345678899999999999999999999999977654
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.26 E-value=4.4 Score=35.74 Aligned_cols=96 Identities=10% Similarity=-0.033 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHH------HHHHhcCChHHHHHH---------HHHHHHHHHHcCCHHHHHHHHH--
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAAL------ELAQNVKDPIEEKKA---------ARGLGASLQRQGKYREAIKYHS-- 181 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al------~l~~~~~~~~~~~~~---------~~~lg~~~~~~~~~~~Ai~~~~-- 181 (230)
.+..+|..+...++++.|+.+|.++- .++...++....... +.....++...|++++|++.|.
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHc
Confidence 67789999999999999999987753 233333333321111 1112335666788888887765
Q ss_pred ----HHHHHHHHhCCccc--HHHHHHHHHHHHHHcCCHHH
Q 026948 182 ----MVLQISEREGEYSG--STEAYGAIADCYTELGDLER 215 (230)
Q Consensus 182 ----~al~~~~~~~~~~~--~~~~~~~lg~~y~~~g~~~~ 215 (230)
+|+.+.++.+. .. ........+.-....|+++.
T Consensus 763 ~~~~~A~~lA~~~~~-~~~~i~~~~~~~~~~L~~~~~~~~ 801 (814)
T 3mkq_A 763 QRFSEAAFLGSTYGL-GDNEVNDIVTKWKENLILNGKNTV 801 (814)
T ss_dssp TCHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred CChHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHhccchhH
Confidence 34555544433 22 44555556666666666543
No 244
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=92.26 E-value=3.6 Score=32.82 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhC-CcccH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGK-YREAIKYHSMVLQISEREG-EYSGS 196 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~-~~~Ai~~~~~al~~~~~~~-~~~~~ 196 (230)
.++.=+..+.+.|++..|.+...-.++.+.+.+..... .....+..++..... -.+=.++.+++++...+.+ .+.+.
T Consensus 57 LL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~-~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gd 135 (336)
T 3lpz_A 57 ILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDG-ASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGD 135 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH-HHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH-HHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCC
Confidence 34445556666677777766655555555543322211 233344444443332 1123567778888887754 35678
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Q 026948 197 TEAYGAIADCYTELGDLERAARFY 220 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~~~~A~~~~ 220 (230)
+..+..+|..|++.+++.+|..+|
T Consensus 136 p~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 136 PELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHHHHHH
Confidence 899999999999999999999887
No 245
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=91.89 E-value=1.3 Score=41.05 Aligned_cols=100 Identities=17% Similarity=0.093 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccH
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQ-NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 196 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~ 196 (230)
.+++.+=..|.+.|+.++|...+.+..+... .... ....|+-+-..+++.|+.++|.+.|++-. ..+-.| +
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P---dvvTYNtLI~Glck~G~~~eA~~Lf~eM~----~~G~~P-D 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL---TLDMYNAVMLGWARQGAFKELVYVLFMVK----DAGLTP-D 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHH----HTTCCC-C
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC---CHhHHHHHHHHHHhCCCHHHHHHHHHHHH----HcCCCC-c
Confidence 3566777788899999999999976554221 1111 34567788889999999999999999843 333434 5
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHH
Q 026948 197 TEAYGAIADCYTELGD-LERAARFYDKYIS 225 (230)
Q Consensus 197 ~~~~~~lg~~y~~~g~-~~~A~~~~~~al~ 225 (230)
..+|..+-.++.+.|+ .++|.+.+++..+
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 6788888889999998 4788899888765
No 246
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.80 E-value=2.5 Score=35.77 Aligned_cols=84 Identities=13% Similarity=0.136 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcC
Q 026948 132 DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 211 (230)
Q Consensus 132 ~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g 211 (230)
+.++|.+.|.+... .. -.+ ...+|..+-..+.+.|++++|.+.|++-.+. +-.| ...+|..+-..|...|
T Consensus 85 ~l~~A~~lf~~M~~--~G--~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----g~~P-d~~tyn~lI~~~~~~g 154 (501)
T 4g26_A 85 GLSRGFDIFKQMIV--DK--VVP-NEATFTNGARLAVAKDDPEMAFDMVKQMKAF----GIQP-RLRSYGPALFGFCRKG 154 (501)
T ss_dssp HHHHHHHHHHHHHH--TT--CCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHH--hC--CCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCC-ccceehHHHHHHHHCC
Confidence 46778777776554 11 111 3456778888999999999999999985432 2223 5678999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 026948 212 DLERAARFYDKYIS 225 (230)
Q Consensus 212 ~~~~A~~~~~~al~ 225 (230)
+.++|.+.|++..+
T Consensus 155 ~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 155 DADKAYEVDAHMVE 168 (501)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998765
No 247
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.08 E-value=3.2 Score=29.88 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHH--HH----------HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALE--LA----------QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVL 184 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~--l~----------~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al 184 (230)
+.+.+..+.+|...++|.+|+...++.++ +. .-.-++.+....+..+|..+.+.|+-++||.++..+.
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 44677889999999999999999999883 11 1111334455667889999999999999999999987
Q ss_pred HH
Q 026948 185 QI 186 (230)
Q Consensus 185 ~~ 186 (230)
..
T Consensus 142 ~~ 143 (242)
T 3kae_A 142 GK 143 (242)
T ss_dssp HH
T ss_pred CC
Confidence 65
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.18 E-value=3.9 Score=29.38 Aligned_cols=47 Identities=19% Similarity=0.063 Sum_probs=33.9
Q ss_pred HhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 128 LRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 128 ~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
...|+++.|.+..++. + ....+..+|......|+++-|.++|+++-+
T Consensus 16 L~lg~l~~A~e~a~~l-------~----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-------N----DSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHTTCHHHHHHHHHHH-------C----CHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HhcCCHHHHHHHHHHh-------C----CHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 3567888877765432 1 245677889999999999999999887643
No 249
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.99 E-value=0.91 Score=38.33 Aligned_cols=90 Identities=13% Similarity=-0.007 Sum_probs=56.3
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHhCCcccHHHH
Q 026948 121 LKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG-KYREAIKYHSMVLQISEREGEYSGSTEA 199 (230)
Q Consensus 121 ~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~-~~~~Ai~~~~~al~~~~~~~~~~~~~~~ 199 (230)
...+......++.+.|...|.++ . .+. . ....+...+..-...+ +++.|...|+++++.. +..+..
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~-~~~--~---~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~------~~~~~~ 356 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-G-NEG--V---GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH------PDSTLL 356 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-T-TSC--C---CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC------TTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-h-CCC--C---ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC------CCCHHH
Confidence 33444444567788898888888 2 111 1 1223444444444444 6999999999998764 333344
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 200 YGAIADCYTELGDLERAARFYDKY 223 (230)
Q Consensus 200 ~~~lg~~y~~~g~~~~A~~~~~~a 223 (230)
+...+......|+.++|...|+++
T Consensus 357 ~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 357 KEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 555566666778888887777765
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.48 E-value=4.7 Score=35.55 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 158 KAARGLGASLQRQGKYREAIKYHSMV 183 (230)
Q Consensus 158 ~~~~~lg~~~~~~~~~~~Ai~~~~~a 183 (230)
..+..+|..+.+.++++.|+++|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 46778999999999999999999986
No 251
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=89.15 E-value=2.7 Score=29.49 Aligned_cols=85 Identities=9% Similarity=0.045 Sum_probs=61.3
Q ss_pred hhhhhhhccccccCCCCCcccccCccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 026948 88 ESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASL 167 (230)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~ 167 (230)
+.|.+++...|.. . ....+..++.+..-|.. ...+|.++|.+.|+.++++.++ .+..+...+..-
T Consensus 40 d~YerAia~~Pp~-----k---~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk------FAKiwi~~AqFE 104 (161)
T 4h7y_A 40 GRYSQAIEALPPD-----K---YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK------FAFVHISFAQFE 104 (161)
T ss_dssp HHHHHHHHHSCGG-----G---GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT------BHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcc-----c---cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH------HHHHHHHHHHHH
Confidence 3466666666552 0 13455566666666644 4558999999999999997333 266667777778
Q ss_pred HHcCCHHHHHHHHHHHHHHH
Q 026948 168 QRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 168 ~~~~~~~~Ai~~~~~al~~~ 187 (230)
.++|+.+.|.+.+.+|+.+.
T Consensus 105 iRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 105 LSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp HHTTCHHHHHHHHHHHHHTT
T ss_pred HHcccHHHHHHHHHHHhccC
Confidence 89999999999999999875
No 252
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=87.76 E-value=1.3 Score=28.03 Aligned_cols=32 Identities=25% Similarity=0.275 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 155 EEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 155 ~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
..+..+.-.+..+...|+|++||++.+++...
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 34555666777777777777777777777555
No 253
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.52 E-value=1.7 Score=27.18 Aligned_cols=37 Identities=16% Similarity=0.308 Sum_probs=27.6
Q ss_pred CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 111 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 111 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
+|....+..+...|...-..|+|++|+.+|..+++..
T Consensus 10 ~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~l 46 (86)
T 4a5x_A 10 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLL 46 (86)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3445566667777888888888888888888888754
No 254
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.37 E-value=1.4 Score=37.37 Aligned_cols=75 Identities=13% Similarity=0.030 Sum_probs=59.0
Q ss_pred CccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 111 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 111 ~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~-~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.+...++..++-+=..|...+.|++|.....++. .+.. ......++.++.+|.++.-+++|.+|.+++..|+...
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3455667677788889999999999999888774 2321 2344567889999999999999999999999987643
No 255
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=86.99 E-value=4.2 Score=25.71 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
+...+...-.++..+...|+|++|+++..++....
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL 45 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYL 45 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 33455555678888999999999999999988854
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.93 E-value=2.6 Score=39.57 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=71.8
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHH-----------------HhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELA-----------------QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHS 181 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~-----------------~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~ 181 (230)
..+.+|.++...|++++|.++|.++-.-. ............|..+...+.+.+.++.+++..+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35789999999999999999998763211 1111111123457777788889999999999999
Q ss_pred HHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 182 MVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 182 ~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
.|++.... ++.......|.++=..+..+|+|++|.....
T Consensus 924 lAi~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 924 LADASKET-DDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 99876421 1112233467888888899999999976553
No 257
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=86.64 E-value=1.6 Score=27.16 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=12.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 160 ARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 160 ~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
+...|.-.=..|+|++|+.+|.++++
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 33334344445555555555555544
No 258
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=86.51 E-value=2.2 Score=38.10 Aligned_cols=58 Identities=17% Similarity=0.108 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 120 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMV 183 (230)
Q Consensus 120 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~a 183 (230)
+..-+..+...|+|+-|+...++|...++. .-.+++.|+.+|..+|+|+.|+-.+..+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs------eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALD------SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSS------CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCch------hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 334566667889999999999999998776 6788999999999999999999887765
No 259
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=86.17 E-value=2.3 Score=30.59 Aligned_cols=47 Identities=11% Similarity=0.114 Sum_probs=39.0
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 167 LQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 224 (230)
Q Consensus 167 ~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 224 (230)
..+.|+++.|.+..+.. +....|..+|+.....|+++-|..+|+++-
T Consensus 15 AL~lg~l~~A~e~a~~l-----------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----------NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHhcCCHHHHHHHHHHh-----------CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 35779999999887652 235789999999999999999999998863
No 260
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=86.08 E-value=4.7 Score=32.80 Aligned_cols=71 Identities=10% Similarity=-0.047 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhCCcc
Q 026948 118 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE-REGEYS 194 (230)
Q Consensus 118 ~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~-~~~~~~ 194 (230)
.+...++..+...|++.+++....+.+...+- ...++..+-.++...|+..+|++.|+++-+... +.+-.|
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~------~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P 243 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPY------REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDP 243 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34456777888999999999999998875433 456778888899999999999999999877543 344444
No 261
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=85.40 E-value=0.92 Score=27.87 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=12.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 202 AIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 202 ~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
.+|+=|...|+|+.|+.||+.+++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
Confidence 345555555555555555555544
No 262
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=85.20 E-value=2 Score=26.62 Aligned_cols=19 Identities=32% Similarity=0.503 Sum_probs=8.9
Q ss_pred HHcCCHHHHHHHHHHHHHh
Q 026948 208 TELGDLERAARFYDKYISR 226 (230)
Q Consensus 208 ~~~g~~~~A~~~~~~al~~ 226 (230)
...|+|++|+.+|.++++.
T Consensus 22 D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 3444444444444444443
No 263
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=83.87 E-value=4.2 Score=32.75 Aligned_cols=68 Identities=22% Similarity=0.145 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHH
Q 026948 135 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAI 203 (230)
Q Consensus 135 ~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 203 (230)
.++..|.+++..++..-... ...-|..+|-.+++.+++.+|++.+-.+-...++.+....+.+.|..+
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf 342 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEF 342 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHH
Confidence 37788999998887643322 233466677799999999999999999988887776666666665544
No 264
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=83.51 E-value=3.6 Score=25.52 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
..+..+...|...-..|+|++|+.+|.++++..
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 455566677888888899999999998888854
No 265
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.60 E-value=17 Score=29.57 Aligned_cols=102 Identities=8% Similarity=0.032 Sum_probs=69.8
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHh----c-------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcc
Q 026948 126 NFLRNQDLEKAFTEFKAALELAQN----V-------KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 194 (230)
Q Consensus 126 ~~~~~g~~~~A~~~~~~al~l~~~----~-------~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~ 194 (230)
+.....+.++|+++.++....... . ........+...++..|...++.++|..+.+++-......++..
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~ 164 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIP 164 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCcc
Confidence 445667888998888765332111 0 01122345566778899999999999999999987776665543
Q ss_pred --cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 195 --GSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 195 --~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.....|...+..|...++|..+..+.-.++..+
T Consensus 165 ~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 165 LRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 344456667888889999998877777766543
No 266
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=81.78 E-value=5.5 Score=32.76 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHH
Q 026948 135 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAI 203 (230)
Q Consensus 135 ~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 203 (230)
.++..|.+++..++..-... +..-|..+|-.+++.++|.+|+..+-.+-...++.+....+.+.|..+
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~-HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf 364 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 364 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccC-CccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHH
Confidence 36778889998877643222 233466677799999999999999999988887777666666666543
No 267
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=81.45 E-value=4.7 Score=24.94 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 147 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~ 147 (230)
.+..+...|...-..|+|++|+.+|..+++..
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34445556666666777777777777766643
No 268
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=80.99 E-value=17 Score=29.31 Aligned_cols=87 Identities=13% Similarity=-0.011 Sum_probs=60.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHH
Q 026948 141 KAALELAQNVKDPIEEKKAARGLGASLQRQGKY--REAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAAR 218 (230)
Q Consensus 141 ~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~--~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~ 218 (230)
++.+=+.=..+.-...+.++.+||..--..--. ..++..|.+|+...+..-... ...-|..+|-.+.+.+++.+|+.
T Consensus 239 q~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reAl~ 317 (472)
T 3re2_A 239 QELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEAIA 317 (472)
T ss_dssp HHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHHHH
Confidence 444444444455555677888888775543222 238999999999887754433 34457778899999999999999
Q ss_pred HHHHHHHhhh
Q 026948 219 FYDKYISRLE 228 (230)
Q Consensus 219 ~~~~al~~~~ 228 (230)
++-.|-+...
T Consensus 318 ~WA~Aa~Vi~ 327 (472)
T 3re2_A 318 SWVDAGYVAG 327 (472)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9988876543
No 269
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.22 E-value=4 Score=25.49 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
.+..+...+.-.-..|+|++|+.+|..+++.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4555666666666778888888888887655
No 270
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=79.95 E-value=4.1 Score=25.84 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
+..+...|.-.-..|+|++|+.+|..+++.
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 333445555555666666666666666544
No 271
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=79.55 E-value=3.1 Score=25.49 Aligned_cols=33 Identities=9% Similarity=0.276 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+.....+|+-|...|+|+.|+.+|+.+++...
T Consensus 11 ~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~ 43 (78)
T 2rpa_A 11 MIVENVKLAREYALLGNYDSAMVYYQGVLDQMN 43 (78)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 344566788888889999999999998887443
No 272
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=79.11 E-value=4 Score=25.28 Aligned_cols=32 Identities=16% Similarity=0.031 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 155 EEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 155 ~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
..+..+...|.-.-..|+|++|+.+|..+++.
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34444555565555677777777777777665
No 273
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.90 E-value=30 Score=31.81 Aligned_cols=70 Identities=11% Similarity=-0.063 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH-----------------HHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQI-----------------SEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~~-----------------~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
..+-+|.++...|++++|..+|++|-.- ....+........|..+...++..+-++-+++..+
T Consensus 842 ~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~ 921 (950)
T 4gq2_M 842 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 921 (950)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3477999999999999999999976411 01111112234467788999999999999999999
Q ss_pred HHHHhhh
Q 026948 222 KYISRLE 228 (230)
Q Consensus 222 ~al~~~~ 228 (230)
.|++..+
T Consensus 922 lAI~~~~ 928 (950)
T 4gq2_M 922 LADASKE 928 (950)
T ss_dssp HHHHTCC
T ss_pred HHHhhcc
Confidence 9998664
No 274
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=77.92 E-value=8.2 Score=23.81 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=29.1
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
....+..+...|...-..|+|++|+.+|..++++.-
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 344666777888888899999999999999998543
No 275
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=77.38 E-value=23 Score=27.33 Aligned_cols=96 Identities=10% Similarity=-0.004 Sum_probs=65.0
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--------------
Q 026948 126 NFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG-------------- 191 (230)
Q Consensus 126 ~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~-------------- 191 (230)
...+.|+.++|+......++ ..+........+-..++-.|+++.|...++.+.++..+..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~ 79 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIK------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQ 79 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHH------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHH------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHH
Confidence 45678999999999998888 4444666677777888999999999999988877642200
Q ss_pred ---------------CcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 192 ---------------EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 192 ---------------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
..+..-.....-+......|+.++|...-.+|++..
T Consensus 80 ~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~a 130 (273)
T 1zbp_A 80 ARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELR 130 (273)
T ss_dssp HHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcC
Confidence 001111111223444556788888888888887654
No 276
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=77.09 E-value=30 Score=28.83 Aligned_cols=69 Identities=12% Similarity=-0.006 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh-----cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN-----VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI-SE 188 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~-----~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~-~~ 188 (230)
....+=.+|++.++...+...+.. ++-... .-........+|.+|..+...++|.+|.+++..|++. ..
T Consensus 178 l~n~L~kiYFkl~~~~lckni~k~-i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 178 LVNKLNNIYFRIESPQLCSNIFKN-FQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHHSSCCTTHHHHHHT-HHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH-hccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 334566889999999988887743 332211 1134457778999999999999999999999999988 53
No 277
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.99 E-value=21 Score=32.75 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=60.5
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH-----------------HHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 119 SRLKTGKNFLRNQDLEKAFTEFKAALE-----------------LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHS 181 (230)
Q Consensus 119 ~~~~~g~~~~~~g~~~~A~~~~~~al~-----------------l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~ 181 (230)
..+.+|.+|...|++++|..+|++|-. +.............|......+-..+-|+-+++..+
T Consensus 842 ~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~ 921 (950)
T 4gq2_M 842 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 921 (950)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 457899999999999999999986542 111111122233467778888889999999999999
Q ss_pred HHHHHHHHhCCcccHHHHHHHHHHHHHHc
Q 026948 182 MVLQISEREGEYSGSTEAYGAIADCYTEL 210 (230)
Q Consensus 182 ~al~~~~~~~~~~~~~~~~~~lg~~y~~~ 210 (230)
.||.... .++.......|..+=.+....
T Consensus 922 lAI~~~~-~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 922 LADASKE-TDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHHHTCC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcc-cCCccchHHHHHHHHHHHhhC
Confidence 9987652 122223344555554444433
No 278
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=76.94 E-value=8 Score=24.45 Aligned_cols=36 Identities=8% Similarity=0.208 Sum_probs=29.7
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
....+..+...|...-..|+|++|+.+|..+++..-
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 344666777889999999999999999999998654
No 279
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=76.37 E-value=25 Score=28.94 Aligned_cols=86 Identities=8% Similarity=-0.038 Sum_probs=57.9
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHH
Q 026948 141 KAALELAQNVKDPIEEKKAARGLGASLQRQGKY--REAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAAR 218 (230)
Q Consensus 141 ~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~--~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~ 218 (230)
++.+-+.-..+.-...+.++.+||.+--..... ..++..|++|+...+..-... ....|..+|-.+...++|.+|..
T Consensus 246 q~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~-hvYPYtYlgG~~~R~~~~~eAl~ 324 (489)
T 4gq4_A 246 QKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQ 324 (489)
T ss_dssp HHHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccC-cccceeecchHHHHhhhHHHHHH
Confidence 334433333344444667778888775443222 347889999998887654432 34567788999999999999999
Q ss_pred HHHHHHHhh
Q 026948 219 FYDKYISRL 227 (230)
Q Consensus 219 ~~~~al~~~ 227 (230)
++-.+-+..
T Consensus 325 ~wa~aa~Vi 333 (489)
T 4gq4_A 325 AWADTATVI 333 (489)
T ss_dssp HHHHHHHHH
T ss_pred Hhhhhhhhh
Confidence 998876644
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=76.18 E-value=5.1 Score=26.61 Aligned_cols=31 Identities=19% Similarity=0.271 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
.+..+...|.-.-..|+|++|+.+|..+++.
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3344555555555677777777777777655
No 281
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=76.16 E-value=8.7 Score=31.59 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHH
Q 026948 135 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAI 203 (230)
Q Consensus 135 ~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 203 (230)
.++..|++|+..++..-... ...-|..+|-.+.+.++|.+|+.++-.+-+.....+....+...|..+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~-hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccC-cccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 46678899998887632222 244567778888899999999999999988887766555555666554
No 282
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=75.93 E-value=28 Score=28.73 Aligned_cols=86 Identities=8% Similarity=-0.037 Sum_probs=57.6
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHH
Q 026948 142 AALELAQNVKDPIEEKKAARGLGASLQRQGKYR--EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF 219 (230)
Q Consensus 142 ~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~--~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~ 219 (230)
+.+=+.=..+.-...+.++.+||..--..--.. .++..|.+|+...+..-... ...-|..+|-.+.+.+++.+|+.+
T Consensus 262 ~LLWlLyd~GhL~rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~-HvYPYtYlgGy~yR~~~~reAl~~ 340 (550)
T 3u84_A 262 KLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQA 340 (550)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccchhhCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccceeecchhhhhcchHHHHHHH
Confidence 333333333444445667777776654332222 48899999998887754433 344577789999999999999999
Q ss_pred HHHHHHhhh
Q 026948 220 YDKYISRLE 228 (230)
Q Consensus 220 ~~~al~~~~ 228 (230)
+-.|-+...
T Consensus 341 WA~Aa~Vi~ 349 (550)
T 3u84_A 341 WADTATVIQ 349 (550)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 988876543
No 283
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=72.16 E-value=18 Score=31.44 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=57.0
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHH
Q 026948 122 KTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYG 201 (230)
Q Consensus 122 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~ 201 (230)
.+|......+...++..++.+... ...+.. . .-...+.. .+.|+++.|..+|++.-. .........+
T Consensus 257 ~ia~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~--~e~~~r~A-lr~~d~~~a~~~~~~l~~------~~~~~~r~~Y 323 (618)
T 1qsa_A 257 IVAWRLMGNDVTDEQAKWRDDAIM---RSQSTS-L--IERRVRMA-LGTGDRRGLNTWLARLPM------EAKEKDEWRY 323 (618)
T ss_dssp HHHHTSCSTTCCHHHHHHHHHHHH---TCCCHH-H--HHHHHHHH-HHHTCHHHHHHHHHHSCT------TGGGSHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHhccc---cCCChH-H--HHHHHHHH-HHCCCHHHHHHHHHHccc------cccccHhHHH
Confidence 344444445535566666665332 222222 1 22333443 456999999999976322 1123466677
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 202 AIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 202 ~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
=+|.++..+|+.++|..+|+++..
T Consensus 324 W~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 324 WQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhc
Confidence 799999999999999999998864
No 284
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=72.08 E-value=26 Score=32.70 Aligned_cols=68 Identities=6% Similarity=-0.029 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
....|..+-..+++.|+.++|.+.|.+--+...+. - ..+..+|+.|-..|.+.|+.++|.+.|++..+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG-~-~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR-K-LLTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH-T-TCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC-C-CCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 44567888889999999999999997743332111 1 23467899999999999999999999998754
No 285
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=71.40 E-value=23 Score=25.80 Aligned_cols=60 Identities=12% Similarity=0.083 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKY 173 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~ 173 (230)
....+.-.+.+|..++.+++|.+|.+++..|+..++... ......++..+--+..-.|+.
T Consensus 10 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~-~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 10 TAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS-QKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH-HHHHHHHHHHHHHHHHHcCCC
Confidence 345666778999999999999999999999998765422 222344444444444455553
No 286
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=70.35 E-value=11 Score=29.15 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=48.6
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 166 SLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 166 ~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
...+.|+.++|+...+..++-. |.++.....+-..+.-.|++++|..-.+.+.++.+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~------P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p 62 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKAS------PKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 62 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTC------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG
T ss_pred HHHhCCCHHHHHHHHHHHHHhC------CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Confidence 3457799999999999988764 88889999999999999999999999888776543
No 287
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.35 E-value=24 Score=33.13 Aligned_cols=70 Identities=13% Similarity=-0.059 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------HHHHhCCcccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026948 159 AARGLGASLQRQGKYREAIKYHSMVLQ-----------------ISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 221 (230)
Q Consensus 159 ~~~~lg~~~~~~~~~~~Ai~~~~~al~-----------------~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~ 221 (230)
..+-+|.++...|++++|.++|+++-. +..........+..|..+...+++.|.++.+++..+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 347789999999999999999988731 111111122344567778889999999999999999
Q ss_pred HHHHhhh
Q 026948 222 KYISRLE 228 (230)
Q Consensus 222 ~al~~~~ 228 (230)
.|++...
T Consensus 924 lAi~~~~ 930 (1139)
T 4fhn_B 924 LADASKE 930 (1139)
T ss_dssp HHHHHCC
T ss_pred HHHHhcc
Confidence 9998654
No 288
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=70.09 E-value=17 Score=26.58 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.......+.+|..++..++|.+|.+++..|+...
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~ 44 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHC 44 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHC
Confidence 3456778999999999999999999999998875
No 289
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.09 E-value=42 Score=27.19 Aligned_cols=73 Identities=11% Similarity=0.013 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD--PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~--~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
..+.....++..|...++.++|..+.+++-......++ .......|...+..+...++|..+..++-..+...
T Consensus 125 a~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 125 GILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp SHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 35556778899999999999999999999888776653 34566677778888999999998887777766543
No 290
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=69.65 E-value=12 Score=24.73 Aligned_cols=35 Identities=9% Similarity=0.101 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 114 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
...+..+...|...-..|+|++|+.+|..+++++-
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 44666677888888888999999999999998654
No 291
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=67.42 E-value=51 Score=27.12 Aligned_cols=30 Identities=13% Similarity=0.020 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKA 142 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~ 142 (230)
+.-...-+..++..+...|+|.+|.-++..
T Consensus 7 pdl~~~wl~~La~~h~~~~n~~EAa~cl~~ 36 (428)
T 2wm9_A 7 PELRKTWLDSMARIHVKNGDLSEAAMCYVH 36 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 333444555899999999999999988753
No 292
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=67.30 E-value=10 Score=22.83 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
..+|..+...|++++|..+|-+|+.++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 356666677777777777777777665
No 293
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=67.10 E-value=18 Score=23.01 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=11.8
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHH
Q 026948 122 KTGKNFLRNQDLEKAFTEFKAALE 145 (230)
Q Consensus 122 ~~g~~~~~~g~~~~A~~~~~~al~ 145 (230)
.+|-.+...|+++.|+.+|-+|+.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~ 48 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIA 48 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445555555555555544444444
No 294
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.91 E-value=11 Score=24.90 Aligned_cols=17 Identities=35% Similarity=0.620 Sum_probs=10.1
Q ss_pred CCHHHHHHHHHHHHHhh
Q 026948 211 GDLERAARFYDKYISRL 227 (230)
Q Consensus 211 g~~~~A~~~~~~al~~~ 227 (230)
|+.+.|+++|++.+..+
T Consensus 36 g~k~~Al~lYk~GI~eL 52 (116)
T 2dl1_A 36 GQKEEAKNYYKQGIGHL 52 (116)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 56666666666665543
No 295
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=66.64 E-value=54 Score=27.09 Aligned_cols=93 Identities=13% Similarity=0.043 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCCh----------------HH-HHHHHHHHHHHHHHcCCHHHHHHH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP----------------IE-EKKAARGLGASLQRQGKYREAIKY 179 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~----------------~~-~~~~~~~lg~~~~~~~~~~~Ai~~ 179 (230)
..-+..++..+...++|.+|..++.....+..-.... .. ....+......+-+-+.|+.|+..
T Consensus 35 i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l 114 (436)
T 2yin_A 35 IRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISL 114 (436)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3345578999999999999988774332222111110 00 111234444455566778888888
Q ss_pred HHHHHHHHHHh-CCcccHHHHHHHHHHHHHH
Q 026948 180 HSMVLQISERE-GEYSGSTEAYGAIADCYTE 209 (230)
Q Consensus 180 ~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~ 209 (230)
++..+...+.. .|....+.++..++.+|..
T Consensus 115 ~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~ 145 (436)
T 2yin_A 115 CKELAEQYEMEIFDYELLSQNLIQQAKFYES 145 (436)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777664 5555566666666666654
No 296
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=61.09 E-value=14 Score=22.27 Aligned_cols=29 Identities=14% Similarity=0.116 Sum_probs=24.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 026948 200 YGAIADCYTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 200 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 228 (230)
-..+|+.+...|++++|..+|-+|+....
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~ 48 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCG 48 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 45688999999999999999999988654
No 297
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=58.53 E-value=33 Score=23.82 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH
Q 026948 138 TEFKAALELAQN---VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE 214 (230)
Q Consensus 138 ~~~~~al~l~~~---~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 214 (230)
..+++.++.... ..+.+-........+.. .+++.+.|.-... .+.-...+..|...|..++..|+++
T Consensus 49 ~lLErc~~~f~~~~~YknD~RyLklWl~ya~~------~~dp~~if~~L~~----~~IG~~~AlfYe~wA~~lE~~g~~~ 118 (152)
T 4a1g_A 49 TLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY------NSDLHQFFEFLYN----HGIGTLSSPLYIAWAGHLEAQGELQ 118 (152)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT------BSCHHHHHHHHHT----TTTTTTBHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHh------cCCHHHHHHHHHH----CCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 445566655533 23333333333333322 2235555554321 2223456778889999999999999
Q ss_pred HHHHHHHHHHHh
Q 026948 215 RAARFYDKYISR 226 (230)
Q Consensus 215 ~A~~~~~~al~~ 226 (230)
+|...|+++++.
T Consensus 119 ~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 119 HASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999874
No 298
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=58.39 E-value=31 Score=21.58 Aligned_cols=48 Identities=17% Similarity=0.286 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHH-HHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY-GAIADCY 207 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~-~~lg~~y 207 (230)
.++....-|.-+++.++|.+|...|+++.... +.+..-..+ +.++.|-
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t----en~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLS----DNEEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccc----cCHHHHHHHHHHHHHHH
Confidence 34455555666677777777777777765543 223333333 4555554
No 299
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=58.04 E-value=25 Score=22.17 Aligned_cols=63 Identities=8% Similarity=-0.022 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 026948 122 KTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE--EKKAARGLGASLQRQGKYREAIKYHSMVLQISE 188 (230)
Q Consensus 122 ~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~--~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~ 188 (230)
..|..++..|+|=+|=+.++..=.-.+. +... ..-+....|..+...|+. |...+.+++....
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~--~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~ 70 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATG--EERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLE 70 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHT
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCC--chHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHH
Confidence 4455556666666555555554442211 1111 222233334444455665 6666666665543
No 300
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=57.89 E-value=38 Score=23.84 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=46.3
Q ss_pred HHHHHHHHHH---hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHHH
Q 026948 139 EFKAALELAQ---NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLER 215 (230)
Q Consensus 139 ~~~~al~l~~---~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~ 215 (230)
.++++++... ...+.+-........+... ++ +.+.|.-.. ..+.-...+..|...|..++..|++.+
T Consensus 45 lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~if~~L~----~~~IG~~~AlfY~~wA~~lE~~~~~~~ 114 (164)
T 2wvi_A 45 LLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLDMYSYLH----NQGIGVSLAQFYISWAEEYEARENFRK 114 (164)
T ss_dssp HHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHHHHHHHH----HTTSSTTBHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHHHHHHHH----HCCcchhhHHHHHHHHHHHHHcCCHHH
Confidence 4555555443 2334443444444444332 33 444444422 222334567788888999999999999
Q ss_pred HHHHHHHHHHh
Q 026948 216 AARFYDKYISR 226 (230)
Q Consensus 216 A~~~~~~al~~ 226 (230)
|...|+++++.
T Consensus 115 A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 115 ADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 99999998874
No 301
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=54.77 E-value=33 Score=28.78 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=28.5
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.....++..+|++|.-.|+|++|..+.+++++.
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 455668888999999999999999999999864
No 302
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=54.35 E-value=37 Score=21.24 Aligned_cols=48 Identities=29% Similarity=0.331 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH-HHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA-RGLGAS 166 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~-~~lg~~ 166 (230)
..+......|..++..++|.+|...++++..+. +.+..-.++ +.++.|
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t----en~~i~ki~~fyl~ec 99 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS----DNEEIKKIASFYLEEC 99 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc----cCHHHHHHHHHHHHHH
Confidence 466678889999999999999999999987543 333333333 556655
No 303
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=54.27 E-value=28 Score=28.88 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=27.9
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
.....++..+|++|.-+|+|++|..+.+++++
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45667888899999999999999999998875
No 304
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=53.37 E-value=53 Score=22.74 Aligned_cols=95 Identities=20% Similarity=0.083 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Q 026948 116 ELLSRLKTGKNFL--RNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 193 (230)
Q Consensus 116 ~~~~~~~~g~~~~--~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 193 (230)
-..++-.+|.++- .-|+...-+.+|-+.-. +....-.++. +...+|.-++=-+.+...+ ++.
T Consensus 58 ~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~------~se~vd~ALd----~lv~~~KkDqLdki~~~~l------~n~ 121 (172)
T 1wy6_A 58 MFQVLDKIGSYFDLDKCQNLKSVVECGVINNT------LNEHVNKALD----ILVIQGKRDKLEEIGREIL------KNN 121 (172)
T ss_dssp HHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTC------CCHHHHHHHH----HHHHTTCHHHHHHHHHHHC--------C
T ss_pred HHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcc------hHHHHHHHHH----HHHHhccHhHHHHHHHHHh------ccC
Confidence 3444555665542 34677777766654332 3333333333 2345666555444443321 233
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+..+..+..+|.+|.+.|+..+|.+...+|.+.
T Consensus 122 ~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 122 EVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 445788899999999999999999999888763
No 305
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=52.77 E-value=48 Score=24.67 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH
Q 026948 138 TEFKAALELAQN---VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE 214 (230)
Q Consensus 138 ~~~~~al~l~~~---~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 214 (230)
..++++++.+.. ..+.+-....+...+.. .+++.+.|.-... .+.-...+..|...|..++..|+++
T Consensus 98 ~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~------~~~p~~if~~L~~----~~IG~~~AlfYe~wA~~lE~~g~~~ 167 (223)
T 4aez_C 98 TLLERCTREFVRNPLYKDDVRYLRIWMQYVNY------IDEPVELFSFLAH----HHIGQESSIFYEEYANYFESRGLFQ 167 (223)
T ss_dssp HHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT------CSCHHHHHHHHHH----TTCSTTBHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHc------cCCHHHHHHHHHH----CCcchhHHHHHHHHHHHHHHcCCHH
Confidence 445555554433 33333344444443331 1345555554322 2233456778899999999999999
Q ss_pred HHHHHHHHHHHh
Q 026948 215 RAARFYDKYISR 226 (230)
Q Consensus 215 ~A~~~~~~al~~ 226 (230)
+|...|+++++.
T Consensus 168 ~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 168 KADEVYQKGKRM 179 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 999999999874
No 306
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=52.00 E-value=28 Score=24.51 Aligned_cols=71 Identities=7% Similarity=-0.077 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHH--H-HHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 117 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKA--A-RGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 117 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~--~-~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
....+..|..++..|+|=+|=+.++..=.-.+.-.+....... . ...|..+.+.|+...|...+.+++...
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L 105 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYF 105 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3355777777888888877777666654422221002222233 3 334555667788888888888887665
No 307
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=51.96 E-value=73 Score=23.87 Aligned_cols=53 Identities=13% Similarity=-0.004 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHhC--CcccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 026948 173 YREAIKYHSMVLQISEREG--EYSGSTEAYGAIADCYT-ELGDLERAARFYDKYIS 225 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~ 225 (230)
-+.|...|++|+++.+..- .+|-.-....|.+..|. -+|+.++|....++|.+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3578889999999886532 23333334555555554 48999999988888765
No 308
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=51.19 E-value=23 Score=22.52 Aligned_cols=27 Identities=22% Similarity=0.416 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 161 RGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 161 ~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
..+|..+...|+++.|+.+|-+|+.++
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 456666666666666666666665543
No 309
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=49.91 E-value=39 Score=27.94 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 174 REAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 174 ~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
+.-++.++.|+...... ........++..+|++|.-.|+|++|..+.+++++.
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 33444444544432211 123455668888999999999999999999998864
No 310
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=49.59 E-value=14 Score=23.12 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=12.6
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 026948 171 GKYREAIKYHSMVLQISER 189 (230)
Q Consensus 171 ~~~~~Ai~~~~~al~~~~~ 189 (230)
..|++|..+..++|.+++.
T Consensus 11 ~~h~~AF~~Is~aL~~DE~ 29 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDED 29 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 4566677777777776654
No 311
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=48.87 E-value=81 Score=23.51 Aligned_cols=58 Identities=9% Similarity=-0.010 Sum_probs=39.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHh--CCcccHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhh
Q 026948 170 QGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADC-YTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 170 ~~~~~~Ai~~~~~al~~~~~~--~~~~~~~~~~~~lg~~-y~~~g~~~~A~~~~~~al~~~ 227 (230)
.|+-+.|...|+.|.++..+. +.+|-.-..-.|.+.. |.-+++.++|....++|+++.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 566788999999998887652 2223233344444444 566889999999988887754
No 312
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=48.56 E-value=40 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=28.1
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.....++..+|++|.-.|+|++|..+.+++++.
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 455668888999999999999999999998864
No 313
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.81 E-value=69 Score=22.44 Aligned_cols=23 Identities=9% Similarity=0.013 Sum_probs=10.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Q 026948 203 IADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 203 lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
-|......|+..-|...+.+++.
T Consensus 81 vAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 81 GAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH
Confidence 33334444444444444444444
No 314
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=46.09 E-value=97 Score=23.63 Aligned_cols=54 Identities=13% Similarity=-0.009 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHhCC--cccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 026948 173 YREAIKYHSMVLQISEREGE--YSGSTEAYGAIADCYT-ELGDLERAARFYDKYISR 226 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~~--~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~ 226 (230)
-+.|...|++|.++....-. .|-.-....|.+..|. -+++.++|....++|.+-
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 35688999999998765332 2333334555555554 489999999888777653
No 315
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=45.57 E-value=1.1e+02 Score=25.33 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHhcCC----hHHHHHHHHHHHHHHHHcCCH
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL-AQNVKD----PIEEKKAARGLGASLQRQGKY 173 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l-~~~~~~----~~~~~~~~~~lg~~~~~~~~~ 173 (230)
+....+.-.+.+|..+..+++|.+|.+++..|+.. ++.... ......++..+--+..-.|+.
T Consensus 215 p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyLIpv~LLlG~~ 281 (455)
T 3t5v_B 215 QLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYMIPTGLILGKM 281 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHHHHHHHHcCCC
Confidence 45567777889999999999999999999999998 765321 122233444444444445554
No 316
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.18 E-value=56 Score=21.51 Aligned_cols=14 Identities=29% Similarity=0.316 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHH
Q 026948 133 LEKAFTEFKAALEL 146 (230)
Q Consensus 133 ~~~A~~~~~~al~l 146 (230)
+++|..+..++|++
T Consensus 19 h~~AF~~Is~AL~~ 32 (116)
T 2dl1_A 19 YKKAFLFVNKGLNT 32 (116)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 34444444555543
No 317
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=42.72 E-value=1.1e+02 Score=23.31 Aligned_cols=54 Identities=11% Similarity=0.001 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHhC--CcccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 026948 173 YREAIKYHSMVLQISEREG--EYSGSTEAYGAIADCYT-ELGDLERAARFYDKYISR 226 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~ 226 (230)
-+.|...|++|+++....- -+|-.-....|.+..|. -+++.++|....++|.+-
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3568889999999886532 23333334555555554 489999999888877653
No 318
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=41.89 E-value=1.1e+02 Score=23.11 Aligned_cols=53 Identities=13% Similarity=-0.043 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHhCC--cccHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Q 026948 173 YREAIKYHSMVLQISEREGE--YSGSTEAYGAIADCY-TELGDLERAARFYDKYIS 225 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~~--~~~~~~~~~~lg~~y-~~~g~~~~A~~~~~~al~ 225 (230)
-+.|...|++|.++....-. +|-.-..-.|.+..| .-+++.++|....++|.+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 36788999999998765322 333333445555554 458999999988877765
No 319
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=41.79 E-value=63 Score=26.85 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=28.7
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.....++..+|++|.-.|+|++|..+.+++++.
T Consensus 194 ~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 194 FNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 345668888999999999999999999999864
No 320
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=41.68 E-value=63 Score=20.25 Aligned_cols=62 Identities=23% Similarity=0.121 Sum_probs=42.4
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHhhh
Q 026948 163 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC--YTELGDLERAARFYDKYISRLE 228 (230)
Q Consensus 163 lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~--y~~~g~~~~A~~~~~~al~~~~ 228 (230)
-|..++..|+|=+|-+.++..-.-... +.......+..++.. ....|+. |...+.+++....
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~--~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~ 70 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATG--EERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLE 70 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHT
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCC--chHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHH
Confidence 456667778999998888887665522 223344555555444 4568888 9999999988654
No 321
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=41.22 E-value=62 Score=22.41 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 152 DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 152 ~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
+.+..+..+..+|.+|.+.|+-.+|-+.+.+|-+
T Consensus 120 n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 120 NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp -CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3333577899999999999999999999999743
No 322
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=41.06 E-value=1.2e+02 Score=23.16 Aligned_cols=53 Identities=9% Similarity=-0.077 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHhCC--cccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 026948 173 YREAIKYHSMVLQISEREGE--YSGSTEAYGAIADCYT-ELGDLERAARFYDKYISR 226 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~~--~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~ 226 (230)
-+.|...|++|+++. ..-. +|-.-....|.+..|. -+++.++|....++|.+-
T Consensus 172 ~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356888999999988 4221 2223334455555554 489999999988888763
No 323
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=40.73 E-value=85 Score=21.50 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 157 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 157 (230)
.+..++..|.+|...||.+.|--.|.+.+.+...+..+++..
T Consensus 41 sa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIpkHpdyk 82 (144)
T 2a9u_A 41 SALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIKKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 344566789999999999999999999999887766655543
No 324
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=38.90 E-value=49 Score=27.44 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
.....++.-++.+|+..++|++|+++.++++.
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 33566788899999999999999999999875
No 325
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=38.77 E-value=54 Score=27.43 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
.....++.-++.+|+..++|++|+++.++++..
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 335567788999999999999999999999864
No 326
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=38.54 E-value=1.4e+02 Score=23.35 Aligned_cols=80 Identities=9% Similarity=-0.014 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHH
Q 026948 130 NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 209 (230)
Q Consensus 130 ~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 209 (230)
.|+|=+|-..|+-...-+-+.+........++.-+..+.+.|++..|.+...-.++..++.+...+ ......+..++..
T Consensus 26 ~G~yYEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~-~~~~~rl~~l~~~ 104 (312)
T 2wpv_A 26 AGDYYEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD-DISVARLVRLIAE 104 (312)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS-HHHHHHHHHHHTT
T ss_pred ccChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHH
Confidence 355555544444333333333333334444555556666777777777777777777666555443 3455556666554
Q ss_pred c
Q 026948 210 L 210 (230)
Q Consensus 210 ~ 210 (230)
.
T Consensus 105 ~ 105 (312)
T 2wpv_A 105 L 105 (312)
T ss_dssp C
T ss_pred C
Confidence 3
No 327
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=38.32 E-value=48 Score=27.52 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=28.1
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYISR 226 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 226 (230)
.....++..+|++|.-.|+|++|..+.+++++.
T Consensus 199 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 199 INYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 355668888999999999999999999998864
No 328
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=37.68 E-value=55 Score=26.98 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.....++.-++.+|+..|+|++|+++.++++...
T Consensus 187 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 187 MNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 3355678888999999999999999999998754
No 329
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.63 E-value=57 Score=26.97 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.....++.-++.+|+..|+|++|+++.++++...
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~~ 226 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIKGA 226 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 3356678888999999999999999999998753
No 330
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=36.56 E-value=1.2e+02 Score=22.07 Aligned_cols=84 Identities=8% Similarity=-0.020 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCHH
Q 026948 138 TEFKAALELAQN---VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE 214 (230)
Q Consensus 138 ~~~~~al~l~~~---~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 214 (230)
..++++++.... ..+.+-....+...+..+ ..++..++.+.|.-.... +.-...+..|...|..++..|+++
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~----~IG~~~AlfYe~wA~~lE~~g~~~ 132 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK----GIGTKLSLFYEEFSKLLENAQFFL 132 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH----TSSTTBHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC----CCcHHHHHHHHHHHHHHHHcCCHH
Confidence 456677665554 334443444444444332 234467888888765332 223456788999999999999999
Q ss_pred HHHHHHHHHHHh
Q 026948 215 RAARFYDKYISR 226 (230)
Q Consensus 215 ~A~~~~~~al~~ 226 (230)
+|...|+++++.
T Consensus 133 ~A~~Vy~~GI~~ 144 (202)
T 3esl_A 133 EAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999999999874
No 331
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=36.09 E-value=46 Score=28.95 Aligned_cols=94 Identities=15% Similarity=-0.000 Sum_probs=61.1
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------HHHhCCc----
Q 026948 126 NFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI--------SEREGEY---- 193 (230)
Q Consensus 126 ~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~--------~~~~~~~---- 193 (230)
.....|+++.|..++.+.-. ......+..+.+|..+...|+.++|..+|+++..- .+..+.+
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~~~fYg~lAa~~Lg~~~~~~ 367 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPM------EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYELK 367 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCT------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSHHHHHHHHHTTCCCCCC
T ss_pred HHHHCCCHHHHHHHHHHccc------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCC
Confidence 34456999999888865433 22235777899999999999999999999987531 1111110
Q ss_pred -----c---c--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 194 -----S---G--STEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 194 -----~---~--~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
+ . ....-...+..+...|....|...+.....
T Consensus 368 ~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~ 409 (618)
T 1qsa_A 368 IDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVK 409 (618)
T ss_dssp CCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHh
Confidence 0 0 111233456667788888888877766543
No 332
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=35.97 E-value=69 Score=21.95 Aligned_cols=29 Identities=34% Similarity=0.580 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 026948 199 AYGAIADCYTELGDLERAARFYDKYISRL 227 (230)
Q Consensus 199 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 227 (230)
.+...|..|...|+.+.|.-.|-++..++
T Consensus 42 ~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 42 EIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 34455666666666666666666655544
No 333
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=34.14 E-value=89 Score=26.26 Aligned_cols=31 Identities=10% Similarity=-0.049 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
....++..+|++|.-.+++++|..+.+++++
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455777778888888888888888877765
No 334
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=34.01 E-value=1.4e+02 Score=22.79 Aligned_cols=54 Identities=17% Similarity=0.057 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHhC----CcccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 026948 173 YREAIKYHSMVLQISEREG----EYSGSTEAYGAIADCYT-ELGDLERAARFYDKYISR 226 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~----~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~ 226 (230)
-+.|...|++|.++.++.- ..|-.--...|.+..|. -+++.++|....++|.+-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4568888899888875433 22223334445555544 589999999988888764
No 335
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=33.62 E-value=1.2e+02 Score=21.26 Aligned_cols=16 Identities=6% Similarity=0.196 Sum_probs=8.5
Q ss_pred HHHHHhCCCHHHHHHH
Q 026948 124 GKNFLRNQDLEKAFTE 139 (230)
Q Consensus 124 g~~~~~~g~~~~A~~~ 139 (230)
+...+-..+|.+.+..
T Consensus 15 a~~afl~~dYs~VI~~ 30 (161)
T 2ynq_A 15 STELFLQNKYSDVITT 30 (161)
T ss_dssp HHHHHTTTCHHHHHHH
T ss_pred HHHHHHHhhHHHHHHH
Confidence 4445555566655553
No 336
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=33.58 E-value=1.9e+02 Score=24.36 Aligned_cols=17 Identities=35% Similarity=0.448 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHhc
Q 026948 134 EKAFTEFKAALELAQNV 150 (230)
Q Consensus 134 ~~A~~~~~~al~l~~~~ 150 (230)
++|+++|++|++..++.
T Consensus 449 ~kAi~~Y~~Ai~~L~k~ 465 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKA 465 (526)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 45555555555544443
No 337
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=32.07 E-value=1.7e+02 Score=22.30 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHHHHhcCC-hHH-HHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRNQD----------LEKAFTEFKAALELAQNVKD-PIE-EKKAARGLGASLQ-RQGKYREAIKYHS 181 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~l~~~~~~-~~~-~~~~~~~lg~~~~-~~~~~~~Ai~~~~ 181 (230)
..+..+-..|..|..... -+.|...|++|.+++..... ++. ..-++ |.+..|+ -.++.++|+...+
T Consensus 144 skVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~L~pthPirLGLaL-NfSVFyYEiln~~~~Ac~lAk 222 (260)
T 2npm_A 144 SKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVAKDLEPTHPIRLGLAL-NFSVFHYEILNEPRAAIDMAK 222 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHHH
Confidence 344444467777653321 34677899999999832322 222 22233 3333334 4899999999999
Q ss_pred HHHHHH
Q 026948 182 MVLQIS 187 (230)
Q Consensus 182 ~al~~~ 187 (230)
+|++-.
T Consensus 223 ~Afd~A 228 (260)
T 2npm_A 223 EAFEMA 228 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 338
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=31.32 E-value=1.1e+02 Score=19.76 Aligned_cols=32 Identities=6% Similarity=-0.037 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
...++++.--+.-..+.|+|++|.+.+++|-+
T Consensus 17 aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 17 AGDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34455555556666667777777777666643
No 339
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=31.25 E-value=2e+02 Score=23.00 Aligned_cols=32 Identities=22% Similarity=0.089 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISE 188 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~ 188 (230)
+.+++..|......+++.+|+..++.|.+..+
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~ 284 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKLYA 284 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 55677777777788888888888888876654
No 340
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=31.22 E-value=1.3e+02 Score=25.40 Aligned_cols=32 Identities=9% Similarity=0.127 Sum_probs=26.9
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 194 SGSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 194 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
.....++..+|++|.-.+++++|..+.+++++
T Consensus 195 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 195 ACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 34556788889999999999999999998886
No 341
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=30.79 E-value=54 Score=27.35 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 195 GSTEAYGAIADCYTELGDLERAARFYDKYIS 225 (230)
Q Consensus 195 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 225 (230)
....++..+|++|...++|++|..+.+++++
T Consensus 178 tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 178 TQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4455777788888888888888888777653
No 342
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=30.11 E-value=1.1e+02 Score=19.59 Aligned_cols=32 Identities=9% Similarity=0.042 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
...++++.--+.-..+.|+|++|.+.++++-+
T Consensus 15 aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 15 SGQARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34445555555556666666666666666533
No 343
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.78 E-value=95 Score=25.75 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 155 EEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 155 ~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
....++.-++.+|+-.|+|++|+++.++++..
T Consensus 195 tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 195 NKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 35567888899999999999999999999865
No 344
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=29.71 E-value=11 Score=28.74 Aligned_cols=37 Identities=11% Similarity=0.189 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Q 026948 113 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 149 (230)
Q Consensus 113 ~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~ 149 (230)
....+..+...|.-.-..|+|++|+.+|..++++.-.
T Consensus 19 ~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~ 55 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 55 (257)
T ss_dssp -------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3345556667788888889999999999998886543
No 345
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=28.37 E-value=45 Score=20.69 Aligned_cols=28 Identities=11% Similarity=0.004 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMV 183 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~a 183 (230)
.+.+|..=|..|.+.||+..|+.++.=+
T Consensus 34 mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 34 NIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5556666677777888888777776543
No 346
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=27.61 E-value=1.9e+02 Score=21.59 Aligned_cols=53 Identities=11% Similarity=-0.080 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHhCC--cccHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Q 026948 173 YREAIKYHSMVLQISEREGE--YSGSTEAYGAIADCY-TELGDLERAARFYDKYIS 225 (230)
Q Consensus 173 ~~~Ai~~~~~al~~~~~~~~--~~~~~~~~~~lg~~y-~~~g~~~~A~~~~~~al~ 225 (230)
-+.|...|++|.++....-. +|-.-....|.+..| .-+++.++|....++|.+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46788999999998865332 233333444555554 567999999888777765
No 347
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=27.22 E-value=1.4e+02 Score=20.62 Aligned_cols=31 Identities=16% Similarity=0.079 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
.+..|..-+..+-..|++++|.+.|+.+++.
T Consensus 100 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 100 SSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 5667788888999999999999999999875
No 348
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=26.83 E-value=1.4e+02 Score=20.45 Aligned_cols=29 Identities=3% Similarity=-0.185 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVL 184 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al 184 (230)
.+......|.+|...||.+.|--.|-+-+
T Consensus 41 sa~~L~r~A~~y~~EGd~E~AYilymRy~ 69 (144)
T 2a9u_A 41 SALKIFKTAEECRLDRDEERAYVLYMKYV 69 (144)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34445556777777777777777776643
No 349
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=26.68 E-value=1.1e+02 Score=20.84 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 148 (230)
Q Consensus 116 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~ 148 (230)
.+..++..|.+|...|+.+.|-..|.+...+.-
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 444667889999999999999999999888774
No 350
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=26.40 E-value=71 Score=26.48 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
.....++.-++.+|+..|+|++|+++.++++..
T Consensus 199 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 199 INYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 335567888899999999999999999999864
No 351
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=26.20 E-value=1.4e+02 Score=19.38 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
...++++.--+.-..+.|+|++|.+.++++-+.
T Consensus 19 aG~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~ 51 (109)
T 3k1s_A 19 SGNARSFAMEALQFAKQGKMAEADEAMVKAKEA 51 (109)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555555566666777777777777776443
No 352
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=25.64 E-value=2.1e+02 Score=21.34 Aligned_cols=73 Identities=11% Similarity=0.009 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHhC-----C-----CHHHHHHHHHHHHHHHHh-cCC-hHH-HHHHHHHHHHHHH-HcCCHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRN-----Q-----DLEKAFTEFKAALELAQN-VKD-PIE-EKKAARGLGASLQ-RQGKYREAIKYH 180 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~-----g-----~~~~A~~~~~~al~l~~~-~~~-~~~-~~~~~~~lg~~~~-~~~~~~~Ai~~~ 180 (230)
..+..+-..|..|+.. | --+.|...|++|.+++.. ... +|. ..-++ |.+..|+ -.++.++|+...
T Consensus 118 skVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaL-N~SVF~yEil~~~~~A~~lA 196 (234)
T 2br9_A 118 SKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLAL-NFSVFYYEILNSPDRACRLA 196 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHH
T ss_pred hHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHH
Confidence 3444444677776533 2 134678899999999864 322 222 23233 3333344 489999999998
Q ss_pred HHHHHHHH
Q 026948 181 SMVLQISE 188 (230)
Q Consensus 181 ~~al~~~~ 188 (230)
+++++-.-
T Consensus 197 k~afd~Ai 204 (234)
T 2br9_A 197 KAAFDDAI 204 (234)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
No 353
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=25.29 E-value=2e+02 Score=20.95 Aligned_cols=71 Identities=10% Similarity=0.014 Sum_probs=48.1
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
++...+..+...+..+ ..++..++.+.|.-... +.++ ...+..|..-+..+-..|++++|.+.|+.+++..
T Consensus 75 ND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~--~~IG--~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 75 NDPRFLKIWIWYINLF-LSNNFHESENTFKYMFN--KGIG--TKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp TCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHH--HTSS--TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHH--CCCc--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3444555666555554 23446677777765444 2322 2256678888889999999999999999998753
No 354
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=25.09 E-value=1.5e+02 Score=19.56 Aligned_cols=33 Identities=9% Similarity=-0.092 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
...++.+.--+.-..+.|+|++|.+.++++-+.
T Consensus 34 aG~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~ 66 (120)
T 3l8r_A 34 SGNARSIVHEAFDAMREKNYILAEQKLQEANDE 66 (120)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 455555666666666777777777777776443
No 355
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.86 E-value=1.2e+02 Score=25.35 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 154 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 154 ~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
.....++.-++.+++..++|++|+++.++++.
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33556788899999999999999999999875
No 356
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=23.83 E-value=1.4e+02 Score=25.98 Aligned_cols=50 Identities=16% Similarity=0.156 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHcCCH
Q 026948 158 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 213 (230)
Q Consensus 158 ~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~ 213 (230)
......|...+..|+|..|.+....++... |.+..+...++.+|.++|.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~------p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAE------PDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC------CCcHHHHHHHHHHHHHHHHh
Confidence 345566777789999999999999998774 77788888899999888743
No 357
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=23.17 E-value=1.4e+02 Score=20.05 Aligned_cols=20 Identities=0% Similarity=-0.255 Sum_probs=9.3
Q ss_pred HHHHcCCHHHHHHHHHHHHH
Q 026948 166 SLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 166 ~~~~~~~~~~Ai~~~~~al~ 185 (230)
.....|+|+.|.-..++|.+
T Consensus 25 ~~~~~g~y~~a~F~aqQA~E 44 (141)
T 3o10_A 25 NDLHKNANEWVCFKCYLSTK 44 (141)
T ss_dssp GGTTTTCHHHHHHHHHHHHH
T ss_pred hHHhhCccceEeeehhHHHH
Confidence 33444455555444444443
No 358
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=23.17 E-value=2.9e+02 Score=22.15 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 026948 157 KKAARGLGASLQRQGKYREAIKYHSMVLQISER 189 (230)
Q Consensus 157 ~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~~~ 189 (230)
+.+++..|......+++.+|+.+++.|.+..+.
T Consensus 257 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~ 289 (392)
T 1zb1_A 257 SLSAYYHGLHLEEENRVGEAIAFLDFSMQQLIS 289 (392)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 445667777788888899999999888776554
No 359
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.61 E-value=74 Score=26.49 Aligned_cols=30 Identities=23% Similarity=0.241 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQ 185 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~ 185 (230)
...++.-++.+|+..++|++|+++.++++.
T Consensus 179 k~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 179 QGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 456777899999999999999999998864
No 360
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=22.41 E-value=1.5e+02 Score=20.72 Aligned_cols=66 Identities=12% Similarity=0.057 Sum_probs=41.8
Q ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 112 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 112 ~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
++...+..++..+... ++ +.+.|.-... + +-....+..|..-+..+-..|++.+|.+.|+.+++..
T Consensus 61 nD~RyLklWl~ya~~~---~~---p~~if~~L~~--~--~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 61 SDPRFLNLWLKLGRLC---NE---PLDMYSYLHN--Q--GIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp TCHHHHHHHHHHHHHC---SC---HHHHHHHHHH--T--TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHhc---CC---HHHHHHHHHH--C--CcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3444555566555442 33 3444443322 1 2223356677888888999999999999999998753
No 361
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=22.19 E-value=1.4e+02 Score=25.08 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026948 155 EEKKAARGLGASLQRQGKYREAIKYHSMVLQI 186 (230)
Q Consensus 155 ~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~ 186 (230)
....++.-++.+++..+++++|.++.++++..
T Consensus 196 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 196 CKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 35567888899999999999999999999863
No 362
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=21.55 E-value=1.5e+02 Score=21.98 Aligned_cols=32 Identities=6% Similarity=0.033 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 156 EKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 156 ~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.+..|..-+..+-..|+|.+|...|+.+++..
T Consensus 149 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 149 SSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 56677888889999999999999999998764
No 363
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=21.38 E-value=2.8e+02 Score=21.21 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHhC-----CC-----HHHHHHHHHHHHHHHHh-c--C--ChHHHHHHHHHHHHHHH-HcCCHHHHHH
Q 026948 115 EELLSRLKTGKNFLRN-----QD-----LEKAFTEFKAALELAQN-V--K--DPIEEKKAARGLGASLQ-RQGKYREAIK 178 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~l~~~-~--~--~~~~~~~~~~~lg~~~~-~~~~~~~Ai~ 178 (230)
..+..+-..|..|+.. |+ -+.|...|++|.+++.. . + ++....-++ |....|+ -.+++++|+.
T Consensus 140 skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaL-NfSVFyYEIln~p~~Ac~ 218 (268)
T 3efz_A 140 ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATIL-NYTILKYDLLGNPEGAMK 218 (268)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHH-HHHHHHHTTTCCHHHHHH
T ss_pred hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHH-HHHHHHHHHcCCHHHHHH
Confidence 3444444678877643 22 45778899999998864 3 1 122222222 3333333 5799999999
Q ss_pred HHHHHHHH
Q 026948 179 YHSMVLQI 186 (230)
Q Consensus 179 ~~~~al~~ 186 (230)
..++|++-
T Consensus 219 lAk~AFde 226 (268)
T 3efz_A 219 FANRAIQA 226 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999765
No 364
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=20.41 E-value=2.9e+02 Score=21.02 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhC-----CC-----HHHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHHHHHHH-HcCCHHHHHHH
Q 026948 114 KEELLSRLKTGKNFLRN-----QD-----LEKAFTEFKAALELAQN-VK--DPIEEKKAARGLGASLQ-RQGKYREAIKY 179 (230)
Q Consensus 114 ~~~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~l~~~-~~--~~~~~~~~~~~lg~~~~-~~~~~~~Ai~~ 179 (230)
...+.-+-..|..|+.. |+ -+.|...|++|.+++.. .+ ++....-+++ .+..|+ -.++.++|+..
T Consensus 143 EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLN-fSVFyYEIln~p~~Ac~L 221 (261)
T 3ubw_A 143 ESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALN-FSVFYYEILNSPDRACRL 221 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH-HHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHH-HHHHHHHHcCCHHHHHHH
Confidence 33444444678777532 22 35677899999998864 32 2222333333 333344 47999999999
Q ss_pred HHHHHHHH
Q 026948 180 HSMVLQIS 187 (230)
Q Consensus 180 ~~~al~~~ 187 (230)
.++|++-.
T Consensus 222 Ak~AFd~A 229 (261)
T 3ubw_A 222 AKAAFDDA 229 (261)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887654
No 365
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=20.36 E-value=2.7e+02 Score=20.67 Aligned_cols=72 Identities=8% Similarity=-0.052 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHHHhc-CC--hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 026948 116 ELLSRLKTGKNFL-----RNQDLEKAFTEFKAALELAQNV-KD--PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 187 (230)
Q Consensus 116 ~~~~~~~~g~~~~-----~~g~~~~A~~~~~~al~l~~~~-~~--~~~~~~~~~~lg~~~~~~~~~~~Ai~~~~~al~~~ 187 (230)
.+.-+-..|..|+ ..|+-+.|...|+.|.+++... +. +....-+++.--..|--.+++++|....++|+++.
T Consensus 119 kVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 119 KFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 3444446777765 4577899999999999998752 11 11123333333333446899999999999998763
No 366
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=20.17 E-value=83 Score=15.77 Aligned_cols=13 Identities=8% Similarity=0.294 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHH
Q 026948 213 LERAARFYDKYIS 225 (230)
Q Consensus 213 ~~~A~~~~~~al~ 225 (230)
|++|...|+.+++
T Consensus 18 yDKAVaSfk~alk 30 (37)
T 3s6n_M 18 YDKAVASFKHALK 30 (37)
T ss_pred HHHHHHHHHHHHh
Confidence 5566666665553
No 367
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=20.09 E-value=2.9e+02 Score=20.96 Aligned_cols=72 Identities=13% Similarity=0.029 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhC-----CC-----HHHHHHHHHHHHHHHHh-cCC-hHH-HHHHHHHHHHHHH-HcCCHHHHHHHH
Q 026948 115 EELLSRLKTGKNFLRN-----QD-----LEKAFTEFKAALELAQN-VKD-PIE-EKKAARGLGASLQ-RQGKYREAIKYH 180 (230)
Q Consensus 115 ~~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~l~~~-~~~-~~~-~~~~~~~lg~~~~-~~~~~~~Ai~~~ 180 (230)
..+..+-..|..|+.. |+ -+.|...|++|..++.. ... +|. ..-++ |.+..|+ -.++.++|+...
T Consensus 123 skVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaL-NfSVFyYEiln~~~~Ac~lA 201 (260)
T 1o9d_A 123 SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLAL-NFSVFYYEILNSPDRACNLA 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH-HHHHHHHHTSCCHHHHHHHH
T ss_pred hHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHH-HHHHHHHHHccCHHHHHHHH
Confidence 3444444677776532 22 34677899999999864 322 222 23333 3333344 479999999988
Q ss_pred HHHHHHH
Q 026948 181 SMVLQIS 187 (230)
Q Consensus 181 ~~al~~~ 187 (230)
+++++-.
T Consensus 202 k~Afd~A 208 (260)
T 1o9d_A 202 KQAFDEA 208 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
Done!