Your job contains 1 sequence.
>026955
MELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQDNELPSFPSFIPFLP
PLSAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIGGTSYADFIQSVHLPMQLSQVD
PIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCSNTGSLVLIEPVS
TVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTGMAMASEHDPRIDPFD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026955
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151556 - symbol:AT5G61670 "AT5G61670" species... 994 3.4e-100 1
TAIR|locus:2152845 - symbol:AT5G06130 species:3702 "Arabi... 766 5.0e-76 1
TAIR|locus:2005585 - symbol:LQY1 "LOW QUANTUM YIELD OF PH... 112 3.8e-06 1
>TAIR|locus:2151556 [details] [associations]
symbol:AT5G61670 "AT5G61670" species:3702 "Arabidopsis
thaliana" [GO:0009536 "plastid" evidence=ISS] [GO:0009661
"chromoplast organization" evidence=ISS] [GO:0016120 "carotene
biosynthetic process" evidence=ISS] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB012239 eggNOG:NOG279301
ProtClustDB:CLSN2686933 EMBL:AY065401 EMBL:AY094431 EMBL:AY117226
EMBL:AY084568 EMBL:AY149953 IPI:IPI00531772 RefSeq:NP_200975.1
RefSeq:NP_974975.1 UniGene:At.28655 ProteinModelPortal:Q9FKF4
STRING:Q9FKF4 PaxDb:Q9FKF4 PRIDE:Q9FKF4 EnsemblPlants:AT5G61670.1
EnsemblPlants:AT5G61670.2 GeneID:836289 KEGG:ath:AT5G61670
TAIR:At5g61670 HOGENOM:HOG000265745 InParanoid:Q9FKF4 OMA:INEEQEH
PhylomeDB:Q9FKF4 ArrayExpress:Q9FKF4 Genevestigator:Q9FKF4
Uniprot:Q9FKF4
Length = 307
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 192/230 (83%), Positives = 204/230 (88%)
Query: 1 MELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAELGISKEEQDNEXXXXXXXXXXXX 60
M+LQEI DNIRSRRNKIFLHMEEVRRLRIQQRIKN ELGI EEQ++E
Sbjct: 78 MQLQEIQDNIRSRRNKIFLHMEEVRRLRIQQRIKNTELGIINEEQEHELPNFPSFIPFLP 137
Query: 61 XXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIGGTSYADFIQSVHLPMQLSQVD 120
AANLKVYYATCFSLIAG+ILFGGLLAP+LELKLGIGGTSYADFIQS+HLPMQLSQVD
Sbjct: 138 PLTAANLKVYYATCFSLIAGIILFGGLLAPTLELKLGIGGTSYADFIQSLHLPMQLSQVD 197
Query: 121 PIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCSNTGSLVLIEPVS 180
PIVASFSGGAVGVISALM+VEVNNVKQQE KRCKYCLGTGYLACARCS+TG+LVL EPVS
Sbjct: 198 PIVASFSGGAVGVISALMVVEVNNVKQQEHKRCKYCLGTGYLACARCSSTGALVLTEPVS 257
Query: 181 TVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTGMAMASEHDPRIDPFD 230
+ GG+ LS PKTERCSNCSG+GKVMCPTCLCTGMAMASEHDPRIDPFD
Sbjct: 258 AIAGGNHSLSPPKTERCSNCSGAGKVMCPTCLCTGMAMASEHDPRIDPFD 307
>TAIR|locus:2152845 [details] [associations]
symbol:AT5G06130 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002688
EMBL:AY072147 EMBL:AY133750 IPI:IPI00527561 RefSeq:NP_196231.2
UniGene:At.9801 ProteinModelPortal:Q8VYD8 SMR:Q8VYD8 PaxDb:Q8VYD8
PRIDE:Q8VYD8 EnsemblPlants:AT5G06130.2 GeneID:830500
KEGG:ath:AT5G06130 TAIR:At5g06130 eggNOG:NOG279301
InParanoid:Q8VYD8 OMA:PCARCSA ProtClustDB:CLSN2686933
ArrayExpress:Q8VYD8 Genevestigator:Q8VYD8 Uniprot:Q8VYD8
Length = 315
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 147/231 (63%), Positives = 176/231 (76%)
Query: 1 MELQEIHDNIRSRRNKIFLHMEEVRRLRIQQRIKNAE-LGISKEEQDNEXXXXXXXXXXX 59
M+LQEI DNIRSRRNKIFL MEEVRRLR+QQRIK+ + + E + E
Sbjct: 85 MQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKSVKAINEDSELEATEMPEITSSIPFL 144
Query: 60 XXXXAANLKVYYATCFSLIAGVILFGGLLAPSLELKLGIGGTSYADFIQSVHLPMQLSQV 119
LK Y+T +LI+G+I FGGL+AP+LELK+G+GGTSY DFI+S+HLP+QLSQV
Sbjct: 145 PNVTPKTLKQLYSTSVALISGIIFFGGLIAPNLELKVGLGGTSYEDFIRSLHLPLQLSQV 204
Query: 120 DPIVASFSGGAVGVISALMIVEVNNVKQQEQKRCKYCLGTGYLACARCSNTGSLVLIEPV 179
DPIVASFSGGAVGVIS LM++EVNNVKQQE+KRCKYCLGTGYL CARCS +G + I+P+
Sbjct: 205 DPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYCLGTGYLPCARCSASGVCLSIDPI 264
Query: 180 STVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTGMAMASEHDPRIDPFD 230
+ +Q + T+RC NCSG+GKVMCPTCLCTGM ASEHDPR DPFD
Sbjct: 265 TRPRATNQLMQVATTKRCLNCSGAGKVMCPTCLCTGMVTASEHDPRFDPFD 315
>TAIR|locus:2005585 [details] [associations]
symbol:LQY1 "LOW QUANTUM YIELD OF PHOTOSYSTEM II 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0003756 "protein
disulfide isomerase activity" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0010206 "photosystem II
repair" evidence=IMP] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR001305 PROSITE:PS51188 GO:GO:0016021 EMBL:CP002684
GO:GO:0009570 GO:GO:0046872 GO:GO:0009535 Gene3D:2.10.230.10
SUPFAM:SSF57938 GO:GO:0003756 GO:GO:0010206 HSSP:P08622
EMBL:AC006434 EMBL:BT002378 EMBL:BT006547 EMBL:AK117868
IPI:IPI00538661 RefSeq:NP_177698.1 UniGene:At.34746
ProteinModelPortal:Q8GSJ6 SMR:Q8GSJ6 IntAct:Q8GSJ6 STRING:Q8GSJ6
PRIDE:Q8GSJ6 EnsemblPlants:AT1G75690.1 GeneID:843903
KEGG:ath:AT1G75690 TAIR:At1g75690 eggNOG:NOG306333
HOGENOM:HOG000083374 InParanoid:Q8GSJ6 OMA:TQIDNAA PhylomeDB:Q8GSJ6
ProtClustDB:PLN03165 Genevestigator:Q8GSJ6 Uniprot:Q8GSJ6
Length = 154
Score = 112 (44.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 109 SVHLPMQLSQVDP-IVASFSGG----AVGV-ISALMIVEVNNVKQQEQKR-CKYCLGTGY 161
S P +++DP V + S G A+G+ I +++N ++E + C C GTG
Sbjct: 36 STSYPRIKAELDPNTVVAISVGVASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGA 95
Query: 162 LACARCSNTGSLVLIEPVSTVNGGDQPLSAPKTERCSNCSGSGKVMCPTCLCTGM 216
C C +G+ V +E + GG++ +S C NC G+G + C TC +G+
Sbjct: 96 QKCRLCVGSGN-VTVE----LGGGEKEVS-----NCINCDGAGSLTCTTCQGSGV 140
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 215 0.00087 112 3 11 22 0.36 33
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 584 (62 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.54u 0.14s 17.68t Elapsed: 00:00:01
Total cpu time: 17.54u 0.14s 17.68t Elapsed: 00:00:01
Start: Mon May 20 18:56:11 2013 End: Mon May 20 18:56:12 2013