Your job contains 1 sequence.
>026956
MATGLIRRAISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSP
SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC
LTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSK
KDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSNLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026956
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2168818 - symbol:SDH2-2 "succinate dehydrogena... 879 5.3e-88 1
TAIR|locus:2086716 - symbol:SDH2-1 "succinate dehydrogena... 874 1.8e-87 1
FB|FBgn0014028 - symbol:SdhB "Succinate dehydrogenase B" ... 670 7.4e-66 1
POMBASE|SPAC140.01 - symbol:sdh2 "succinate dehydrogenase... 666 2.0e-65 1
TAIR|locus:504954878 - symbol:SDH2-3 "succinate dehydroge... 662 5.2e-65 1
UNIPROTKB|Q3B8J8 - symbol:sdhb "Succinate dehydrogenase [... 649 1.2e-63 1
UNIPROTKB|F1NNF7 - symbol:SDHB "Succinate dehydrogenase [... 648 1.6e-63 1
UNIPROTKB|Q9YHT2 - symbol:SDHB "Succinate dehydrogenase [... 646 2.6e-63 1
ZFIN|ZDB-GENE-030131-8005 - symbol:sdhb "succinate dehydr... 646 2.6e-63 1
UNIPROTKB|B0BM36 - symbol:sdhb "Succinate dehydrogenase [... 641 8.8e-63 1
SGD|S000003964 - symbol:SDH2 "Iron-sulfur protein subunit... 639 1.4e-62 1
UNIPROTKB|A8WPF0 - symbol:sdhb-1 "Succinate dehydrogenase... 638 1.8e-62 1
ASPGD|ASPL0000047708 - symbol:AN2332 species:162425 "Emer... 634 4.8e-62 1
CGD|CAL0000978 - symbol:SDH2 species:5476 "Candida albica... 633 6.2e-62 1
UNIPROTKB|Q59QN7 - symbol:SDH2 "Putative uncharacterized ... 633 6.2e-62 1
WB|WBGene00006433 - symbol:sdhb-1 species:6239 "Caenorhab... 629 1.6e-61 1
UNIPROTKB|Q09545 - symbol:sdhb-1 "Succinate dehydrogenase... 629 1.6e-61 1
GENEDB_PFALCIPARUM|PFL0630w - symbol:PFL0630w "iron-sulfu... 626 3.4e-61 1
UNIPROTKB|Q8I5S5 - symbol:PFL0630w "Iron-sulfur subunit o... 626 3.4e-61 1
UNIPROTKB|Q3T189 - symbol:SDHB "Succinate dehydrogenase [... 625 4.3e-61 1
MGI|MGI:1914930 - symbol:Sdhb "succinate dehydrogenase co... 624 5.5e-61 1
UNIPROTKB|F1Q3W8 - symbol:SDHB "Uncharacterized protein" ... 623 7.1e-61 1
RGD|1308598 - symbol:Sdhb "succinate dehydrogenase comple... 622 9.0e-61 1
UNIPROTKB|I3LDC1 - symbol:SDHB "Succinate dehydrogenase [... 618 2.4e-60 1
UNIPROTKB|P21912 - symbol:SDHB "Succinate dehydrogenase [... 617 3.1e-60 1
UNIPROTKB|Q007T0 - symbol:SDHB "Succinate dehydrogenase [... 617 3.1e-60 1
TIGR_CMR|ECH_0316 - symbol:ECH_0316 "succinate dehydrogen... 613 8.1e-60 1
TIGR_CMR|SPO_0361 - symbol:SPO_0361 "succinate dehydrogen... 605 5.7e-59 1
DICTYBASE|DDB_G0270120 - symbol:sdhB "succinate dehydroge... 604 7.3e-59 1
FB|FBgn0030975 - symbol:CG7349 species:7227 "Drosophila m... 589 2.8e-57 1
TIGR_CMR|APH_0159 - symbol:APH_0159 "succinate dehydrogen... 573 1.4e-55 1
TIGR_CMR|APH_0162 - symbol:APH_0162 "succinate dehydrogen... 573 1.4e-55 1
TIGR_CMR|NSE_0534 - symbol:NSE_0534 "succinate dehydrogen... 546 1.0e-52 1
TIGR_CMR|SO_1929 - symbol:SO_1929 "succinate dehydrogenas... 501 6.0e-48 1
UNIPROTKB|Q9KQB2 - symbol:VC_2088 "Succinate dehydrogenas... 488 1.4e-46 1
TIGR_CMR|VC_2088 - symbol:VC_2088 "succinate dehydrogenas... 488 1.4e-46 1
TIGR_CMR|CPS_2218 - symbol:CPS_2218 "succinate dehydrogen... 486 2.3e-46 1
UNIPROTKB|P07014 - symbol:sdhB "succinate dehydrogenase i... 481 7.9e-46 1
UNIPROTKB|Q4KFZ0 - symbol:sdhB "Succinate dehydrogenase, ... 474 4.4e-45 1
UNIPROTKB|Q48K72 - symbol:sdhB "Succinate dehydrogenase, ... 466 3.1e-44 1
TIGR_CMR|CBU_1400 - symbol:CBU_1400 "succinate dehydrogen... 451 1.2e-42 1
UNIPROTKB|O53371 - symbol:sdhB "Succinate dehydrogenase a... 335 2.3e-30 1
TIGR_CMR|CHY_1370 - symbol:CHY_1370 "fumarate reductase, ... 278 2.6e-24 1
UNIPROTKB|Q9KNS4 - symbol:VC_2657 "Fumarate reductase, ir... 272 1.1e-23 1
TIGR_CMR|VC_2657 - symbol:VC_2657 "fumarate reductase, ir... 272 1.1e-23 1
UNIPROTKB|P0AC47 - symbol:frdB "fumarate reductase iron-s... 243 1.3e-20 1
TIGR_CMR|SO_0399 - symbol:SO_0399 "fumarate reductase iro... 227 6.5e-19 1
TIGR_CMR|CJE_0459 - symbol:CJE_0459 "fumarate reductase, ... 186 7.0e-18 2
TIGR_CMR|CHY_0064 - symbol:CHY_0064 "fumarate reductase, ... 214 1.6e-17 1
UNIPROTKB|O53669 - symbol:Rv0247c "PROBABLE SUCCINATE DEH... 203 2.3e-16 1
TIGR_CMR|CJE_0489 - symbol:CJE_0489 "succinate dehydrogen... 204 2.3e-16 1
TIGR_CMR|BA_4753 - symbol:BA_4753 "succinate dehydrogenas... 169 9.1e-13 1
UNIPROTKB|Q74DY7 - symbol:frdB "Succinate dehydrogenase/f... 114 0.00012 1
TIGR_CMR|GSU_1178 - symbol:GSU_1178 "fumarate reductase, ... 114 0.00012 1
>TAIR|locus:2168818 [details] [associations]
symbol:SDH2-2 "succinate dehydrogenase 2-2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0008270
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:AB009052 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 ProtClustDB:PLN00129 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AJ278911 EMBL:AY074299 EMBL:AY123036 EMBL:AY087504
IPI:IPI00523799 RefSeq:NP_198881.1 UniGene:At.20145
UniGene:At.67187 UniGene:At.7421 ProteinModelPortal:Q8LB02
SMR:Q8LB02 IntAct:Q8LB02 STRING:Q8LB02 PaxDb:Q8LB02 PRIDE:Q8LB02
EnsemblPlants:AT5G40650.1 GeneID:834065 KEGG:ath:AT5G40650
GeneFarm:2169 TAIR:At5g40650 InParanoid:Q8LB02 OMA:NCSRTCP
PhylomeDB:Q8LB02 Genevestigator:Q8LB02 GermOnline:AT5G40650
Uniprot:Q8LB02
Length = 280
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 162/223 (72%), Positives = 181/223 (81%)
Query: 1 MATGLXXXXXXXXXX-VAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDS 59
MA GL ++ ARL+ AR+ ++ +EAQ K FQIYRWNPD+
Sbjct: 1 MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60
Query: 60 PSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 119
P KPEL++++I+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61 PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
Query: 120 CLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQS 179
CLTKI +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP +PGKEI QS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180
Query: 180 KKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
KKDRAKLDGMYECILCACCSTSCPSYWW E+YLGPAALLHAN
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223
>TAIR|locus:2086716 [details] [associations]
symbol:SDH2-1 "succinate dehydrogenase 2-1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005743 GO:GO:0009055 GO:GO:0046872
GO:GO:0008270 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0006121 GO:GO:0008177
EMBL:AJ278910 EMBL:AB024028 EMBL:AY035013 EMBL:AY063053
EMBL:AY924777 EMBL:AY086901 IPI:IPI00517821 RefSeq:NP_001118718.1
RefSeq:NP_189374.1 UniGene:At.17610 UniGene:At.22540
UniGene:At.32384 UniGene:At.71559 ProteinModelPortal:Q8LBZ7
SMR:Q8LBZ7 IntAct:Q8LBZ7 STRING:Q8LBZ7 PaxDb:Q8LBZ7 PRIDE:Q8LBZ7
EnsemblPlants:AT3G27380.1 EnsemblPlants:AT3G27380.2 GeneID:822359
KEGG:ath:AT3G27380 GeneFarm:2168 TAIR:At3g27380 eggNOG:COG0479
HOGENOM:HOG000160590 InParanoid:Q9LTZ2 KO:K00235 OMA:WSADSRD
PhylomeDB:Q8LBZ7 ProtClustDB:PLN00129 Genevestigator:Q8LBZ7
GermOnline:AT3G27380 GO:GO:0045281 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 Uniprot:Q8LBZ7
Length = 279
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 163/224 (72%), Positives = 183/224 (81%)
Query: 1 MATGLXXXXXXXX-XXVAQPARLLTARFHASEAEAQ-KVEPKASANTDTKKFQIYRWNPD 58
MA+GL +A ARL+ AR+ ++ AEA+ K ++ K FQIYRWNPD
Sbjct: 1 MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60
Query: 59 SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGL 118
+P KPEL+ ++I+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61 NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
Query: 119 ACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQ 178
ACLTKI S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK P +P KEI Q
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180
Query: 179 SKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
SKKDRAKLDGMYECILCACCSTSCPSYWW E+YLGPAALLHAN
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 224
>FB|FBgn0014028 [details] [associations]
symbol:SdhB "Succinate dehydrogenase B" species:7227
"Drosophila melanogaster" [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=ISS;NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS;NAS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS;NAS] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
EMBL:AE013599 GO:GO:0005875 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:L27705 EMBL:AY118923
RefSeq:NP_477101.1 UniGene:Dm.497 ProteinModelPortal:P21914
SMR:P21914 DIP:DIP-20115N IntAct:P21914 MINT:MINT-929605
STRING:P21914 PaxDb:P21914 EnsemblMetazoa:FBtr0086156 GeneID:35590
KEGG:dme:Dmel_CG3283 FlyBase:FBgn0014028 InParanoid:P21914
OrthoDB:EOG4XGXFW PhylomeDB:P21914 GenomeRNAi:35590 NextBio:794181
Bgee:P21914 GermOnline:CG3283 Uniprot:P21914
Length = 297
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 121/191 (63%), Positives = 152/191 (79%)
Query: 35 QKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPS 93
Q+ +PK + KKF+IYRWNPD+ KP ++ +E++L+ECGPMVLDALIKIK+E+DP+
Sbjct: 34 QQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPT 93
Query: 94 LTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNF 152
LTFRRSCREGICGSCAMNI G N LAC++KI + S S + PLPHM+V++DLV DM NF
Sbjct: 94 LTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNF 153
Query: 153 YNQYKSIEPWLKRKNPP-PMPGK-EIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSE 210
Y QY++I+PWL+RKN GK + QS +DR+KLDG+YECILCACCSTSCPSYWW +E
Sbjct: 154 YEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAE 213
Query: 211 AYLGPAALLHA 221
YLGPA L+ A
Sbjct: 214 KYLGPAVLMQA 224
>POMBASE|SPAC140.01 [details] [associations]
symbol:sdh2 "succinate dehydrogenase (ubiquinone)
iron-sulfur protein subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
PomBase:SPAC140.01 Prosite:PS00198 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0006121 GO:GO:0008177 GO:GO:0006105
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 PIR:D32394 PIR:T37633 RefSeq:NP_593530.2
STRING:P21911 PRIDE:P21911 EnsemblFungi:SPAC140.01.1 GeneID:2542842
OrthoDB:EOG4PRX0W NextBio:20803883 Uniprot:P21911
Length = 275
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 125/200 (62%), Positives = 149/200 (74%)
Query: 25 ARFHASEAE--AQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLD 81
AR A+EA A P+ S + K F+IYRWNP+ P KP+L+++ ++L +CGPMVLD
Sbjct: 21 ARMMATEANISATSANPQ-SQGENLKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLD 79
Query: 82 ALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFV 141
ALIKIK+E DP+LTFRRSCREGICGSCAMNI+G N LAC+ I + I PLPH F+
Sbjct: 80 ALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLPHCFI 139
Query: 142 IKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTS 201
+KDLV D+T FY QYKSIEPWL+ N P KE QS+ DRAKLDG+YECILCACCSTS
Sbjct: 140 VKDLVPDLTYFYKQYKSIEPWLQNDNIPK--DKEFYQSRADRAKLDGLYECILCACCSTS 197
Query: 202 CPSYWWTSEAYLGPAALLHA 221
CPSYWW SE YLGPA L+ A
Sbjct: 198 CPSYWWNSEEYLGPAVLMQA 217
>TAIR|locus:504954878 [details] [associations]
symbol:SDH2-3 "succinate dehydrogenase 2-3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005743
GO:GO:0009055 GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0051538 EMBL:AB013395 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 ProtClustDB:PLN00129 GO:GO:0045281
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 EMBL:AJ278912 IPI:IPI00528859
RefSeq:NP_680465.2 UniGene:At.45474 ProteinModelPortal:Q9FJP9
SMR:Q9FJP9 STRING:Q9FJP9 PaxDb:Q9FJP9 EnsemblPlants:AT5G65165.1
GeneID:836640 KEGG:ath:AT5G65165 GeneFarm:2172 TAIR:At5g65165
InParanoid:Q9FJP9 OMA:CRTLTKD PhylomeDB:Q9FJP9
Genevestigator:Q9FJP9 Uniprot:Q9FJP9
Length = 309
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 122/176 (69%), Positives = 142/176 (80%)
Query: 48 KKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K+F+IYRWNPD P SKP L+ F ++L CGPMVLD L KIK+E D SL++RRSCREGICG
Sbjct: 67 KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICG 126
Query: 107 SCAMNIDGCNGLACLTKISPSGSASTI-TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SC+MNIDG N +ACL I+P+ S TI TPLPHM+VIKDLVVD+TNFY QYKS+EPWLK
Sbjct: 127 SCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKT 186
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ PP G+E QS KDR KLDG+YECILCACC+TSCPSYWW E + GPAALL A
Sbjct: 187 RKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQA 241
>UNIPROTKB|Q3B8J8 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8355 "Xenopus laevis"
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 HSSP:Q9YHT2 EMBL:BC043859 EMBL:BC106300
RefSeq:NP_001080247.1 UniGene:Xl.12560 ProteinModelPortal:Q3B8J8
SMR:Q3B8J8 PRIDE:Q3B8J8 GeneID:379939 KEGG:xla:379939
Xenbase:XB-GENE-970197 Uniprot:Q3B8J8
Length = 282
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 120/205 (58%), Positives = 148/205 (72%)
Query: 19 PARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGP 77
P L+ S P + A KKF IYRW+PD P KP ++ +E++L CGP
Sbjct: 13 PVLRLSGALQVSRGAQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGP 72
Query: 78 MVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPL 136
MVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNI+G N LAC +I + S S I PL
Sbjct: 73 MVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPL 132
Query: 137 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCA 196
PHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCA
Sbjct: 133 PHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIEDRDKLDGLYECILCA 192
Query: 197 CCSTSCPSYWWTSEAYLGPAALLHA 221
CCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 193 CCSTSCPSYWWNADKYLGPAVLMQA 217
>UNIPROTKB|F1NNF7 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0016491 GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP GeneTree:ENSGT00390000013558
IPI:IPI00580009 EMBL:AADN02040962 RefSeq:XP_003642553.1
Ensembl:ENSGALT00000000694 GeneID:100859720 KEGG:gga:100859720
Uniprot:F1NNF7
Length = 290
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 124/211 (58%), Positives = 153/211 (72%)
Query: 19 PARLLTARFH------ASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEIN 71
PAR L A A + + + A+A + KKF IYRW+PD P KP ++ +E++
Sbjct: 15 PARFLRAGLRPVRGLEAVQGICRGAQTAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVD 74
Query: 72 LKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAS 131
L +CGPMVLDALIKIK+E+D +LTFRRSCREGICGSCAMNI G N LAC KI P S +
Sbjct: 75 LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKT 134
Query: 132 T-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMY 190
T I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+Y
Sbjct: 135 TKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLY 194
Query: 191 ECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
ECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 195 ECILCACCSTSCPSYWWNGDKYLGPAVLMQA 225
>UNIPROTKB|Q9YHT2 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA;TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
Reactome:REACT_115655 InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0044281 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0022900
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 PDB:1YQ3 PDB:1YQ4 PDB:2FBW PDB:2H88 PDB:2H89 PDB:2WQY
PDBsum:1YQ3 PDBsum:1YQ4 PDBsum:2FBW PDBsum:2H88 PDBsum:2H89
PDBsum:2WQY eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390 HOVERGEN:HBG005483
OrthoDB:EOG4T4CW4 EMBL:AF095937 IPI:IPI00580009
RefSeq:NP_001074344.1 ProteinModelPortal:Q9YHT2 SMR:Q9YHT2
STRING:Q9YHT2 PRIDE:Q9YHT2 GeneID:770063 KEGG:gga:770063
InParanoid:Q9YHT2 EvolutionaryTrace:Q9YHT2 NextBio:20920287
Uniprot:Q9YHT2
Length = 290
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 118/183 (64%), Positives = 144/183 (78%)
Query: 41 ASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRS 99
A+A + KKF IYRW+PD P KP ++ +E++L +CGPMVLDALIKIK+E+D +LTFRRS
Sbjct: 43 AAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRS 102
Query: 100 CREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKS 158
CREGICGSCAMNI G N LAC KI P S +T I PLPHM+V+KDLV D++NFY QYKS
Sbjct: 103 CREGICGSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKS 162
Query: 159 IEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAAL 218
IEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L
Sbjct: 163 IEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVL 222
Query: 219 LHA 221
+ A
Sbjct: 223 MQA 225
>ZFIN|ZDB-GENE-030131-8005 [details] [associations]
symbol:sdhb "succinate dehydrogenase complex,
subunit B, iron sulfur (Ip)" species:7955 "Danio rerio" [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA;ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
ZFIN:ZDB-GENE-030131-8005 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 OMA:WSADSRD
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:BC142799 IPI:IPI00511258 RefSeq:NP_001092210.1
UniGene:Dr.75182 ProteinModelPortal:A5PL98 SMR:A5PL98 STRING:A5PL98
PRIDE:A5PL98 Ensembl:ENSDART00000062264 GeneID:562149
KEGG:dre:562149 NextBio:20884271 Bgee:A5PL98 Uniprot:A5PL98
Length = 280
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 127/208 (61%), Positives = 155/208 (74%)
Query: 16 VAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKE 74
V +PA + RF A A A +P+ KKFQIYRW+PD+ KP ++ +EI+L
Sbjct: 15 VHRPA-VTAVRF-AQTAAAPAAQPRI------KKFQIYRWDPDTVGDKPRMQTYEIDLNT 66
Query: 75 CGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-I 133
CGPMVLDALIKIK+E+D +LTFRRSCREGICGSCAMNI+G N LACL KI + S T I
Sbjct: 67 CGPMVLDALIKIKNEMDSTLTFRRSCREGICGSCAMNINGGNTLACLNKIDTNTSKVTKI 126
Query: 134 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECI 193
PLPHM+V+KDLV DM+NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECI
Sbjct: 127 YPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKKKDESQQGKQQYLQSVEDRQKLDGLYECI 186
Query: 194 LCACCSTSCPSYWWTSEAYLGPAALLHA 221
LCACCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 187 LCACCSTSCPSYWWNADKYLGPAVLMQA 214
>UNIPROTKB|B0BM36 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 CTD:6390 GeneTree:ENSGT00390000013558
HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4 EMBL:BC158270
RefSeq:NP_001120000.1 UniGene:Str.51669 ProteinModelPortal:B0BM36
SMR:B0BM36 STRING:B0BM36 Ensembl:ENSXETT00000029442
GeneID:100144957 KEGG:xtr:100144957 Xenbase:XB-GENE-970193
OMA:LIVDMEP Bgee:B0BM36 Uniprot:B0BM36
Length = 284
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 121/191 (63%), Positives = 146/191 (76%)
Query: 34 AQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDP 92
A P + A KKF IYRW+PD P KP ++ +E++L ECG MVLDALIKIK+E+DP
Sbjct: 30 AAAAAPASQAEARIKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDP 89
Query: 93 SLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTN 151
+LTFRRSCREGICGSCAMNI+G N LAC +I + S S I PLPHM+V+KDLV D++N
Sbjct: 90 TLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSN 149
Query: 152 FYNQYKSIEPWLKRKNPPPMPGKE-IPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSE 210
FY QYKSIEP+LK+K+ GKE QS +DR KLDG+YECILCACCSTSCPSYWW ++
Sbjct: 150 FYAQYKSIEPYLKKKDES-QEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNAD 208
Query: 211 AYLGPAALLHA 221
YLGPA L+ A
Sbjct: 209 KYLGPAVLMQA 219
>SGD|S000003964 [details] [associations]
symbol:SDH2 "Iron-sulfur protein subunit of succinate
dehydrogenase" species:4932 "Saccharomyces cerevisiae" [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA;IGI;IMP;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;IMP] [GO:0045333 "cellular respiration"
evidence=IGI;IMP] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 SGD:S000003964 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
EMBL:BK006945 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0008177
PDB:1ORZ PDB:1PB4 PDBsum:1ORZ PDBsum:1PB4 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 OrthoDB:EOG4PRX0W
EMBL:J05487 EMBL:Z73146 EMBL:AY558189 PIR:A35435 RefSeq:NP_013059.1
ProteinModelPortal:P21801 SMR:P21801 DIP:DIP-5856N IntAct:P21801
MINT:MINT-695166 STRING:P21801 PaxDb:P21801 PeptideAtlas:P21801
EnsemblFungi:YLL041C GeneID:850685 KEGG:sce:YLL041C CYGD:YLL041c
NextBio:966692 Genevestigator:P21801 GermOnline:YLL041C
Uniprot:P21801
Length = 266
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 116/176 (65%), Positives = 139/176 (78%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K F++YRWNPD PS KP L+ ++++L +CGPMVLDAL+KIK E D +LTFRRSCREGICG
Sbjct: 34 KTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICG 93
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LAC+ KI + S I PLPHMF++KDLV D+TNFY QYKSI+P+L+R
Sbjct: 94 SCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQR 153
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ P G E+ QS +DR KLDG+YECILCACCSTSCPSYWW E YLGPA L+ A
Sbjct: 154 SSFPK-DGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQA 208
>UNIPROTKB|A8WPF0 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6238 "Caenorhabditis
briggsae" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 EMBL:HE600951 STRING:A8WPF0
EnsemblMetazoa:CBG00872 WormBase:CBG00872 Uniprot:A8WPF0
Length = 282
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 117/201 (58%), Positives = 152/201 (75%)
Query: 23 LTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLD 81
L A + + A +PK + N K F+IYR+NP++P +KP +++F+++L +CG M+LD
Sbjct: 14 LAANAARAASGAAAAQPKKTGNR-IKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILD 72
Query: 82 ALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMF 140
ALIKIK+E+DP+LTFRRSCREGICGSCAMNI G N LAC+ KI S ST I PLPHMF
Sbjct: 73 ALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMF 132
Query: 141 VIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCST 200
V+KDLV DM FY QY SI+PW+++K P + K++ QS +R +LDG+YECILCACCST
Sbjct: 133 VVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCST 192
Query: 201 SCPSYWWTSEAYLGPAALLHA 221
SCPSYWW ++ YLGPA L+ A
Sbjct: 193 SCPSYWWNADKYLGPAVLMQA 213
>ASPGD|ASPL0000047708 [details] [associations]
symbol:AN2332 species:162425 "Emericella nidulans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA;RCA]
[GO:0000104 "succinate dehydrogenase activity" evidence=RCA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:BN001307 GO:GO:0016491 GO:GO:0006099
EMBL:AACD01000038 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP OrthoDB:EOG4PRX0W RefSeq:XP_659936.1
ProteinModelPortal:Q5BAU8 SMR:Q5BAU8 STRING:Q5BAU8
EnsemblFungi:CADANIAT00009027 GeneID:2875591 KEGG:ani:AN2332.2
Uniprot:Q5BAU8
Length = 273
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 122/199 (61%), Positives = 150/199 (75%)
Query: 25 ARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDAL 83
AR +A+ AQ+ P+ KKFQ+YRWNPD PS KP+++ +E++LK+ GPM+LDAL
Sbjct: 24 ARSYATVESAQEPAPQM------KKFQVYRWNPDKPSEKPKMQTYELDLKKTGPMMLDAL 77
Query: 84 IKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI-SPSGSASTITPLPHMFVI 142
I+IK+EIDP+LTFRRSCREGICGSCAMNIDG N LACL +I + + S I PLPH +V+
Sbjct: 78 IRIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVV 137
Query: 143 KDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSC 202
KDLV D+T Y QYKSI+P+L+R G E QS +DR KLDG+YECILC CCSTSC
Sbjct: 138 KDLVPDLTQIYKQYKSIKPYLQRDTKTE-DGLENRQSPEDRKKLDGLYECILCFCCSTSC 196
Query: 203 PSYWWTSEAYLGPAALLHA 221
PSYWW SE YLGPA LL +
Sbjct: 197 PSYWWNSEEYLGPAILLQS 215
>CGD|CAL0000978 [details] [associations]
symbol:SDH2 species:5476 "Candida albicans" [GO:0030445
"yeast-form cell wall" evidence=IDA] [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978
Prosite:PS00198 GO:GO:0009986 GO:GO:0030445 GO:GO:0009055
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 115/176 (65%), Positives = 142/176 (80%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKFQIYRWNPD+P +P+++ +E++L +CGPMVLDAL+KIK+E D +LT RRSCREGICG
Sbjct: 31 KKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRRSCREGICG 90
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LACL +I S + PLPHMFV++DLV D+T+FY QYKSIEP+L+R
Sbjct: 91 SCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
++ P G+E QS +DRAKLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 151 ESNPA-DGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVLMQA 205
>UNIPROTKB|Q59QN7 [details] [associations]
symbol:SDH2 "Putative uncharacterized protein SDH2"
species:237561 "Candida albicans SC5314" [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0009986 "cell surface"
evidence=IDA] [GO:0030445 "yeast-form cell wall" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978 Prosite:PS00198
GO:GO:0009986 GO:GO:0030445 GO:GO:0009055 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 115/176 (65%), Positives = 142/176 (80%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKFQIYRWNPD+P +P+++ +E++L +CGPMVLDAL+KIK+E D +LT RRSCREGICG
Sbjct: 31 KKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALLKIKNEQDATLTLRRSCREGICG 90
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LACL +I S + PLPHMFV++DLV D+T+FY QYKSIEP+L+R
Sbjct: 91 SCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVRDLVPDLTHFYKQYKSIEPYLQR 150
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
++ P G+E QS +DRAKLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 151 ESNPA-DGRENLQSIEDRAKLDGLYECILCACCSTSCPSYWWNQQQYLGPAVLMQA 205
>WB|WBGene00006433 [details] [associations]
symbol:sdhb-1 species:6239 "Caenorhabditis elegans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 117/199 (58%), Positives = 152/199 (76%)
Query: 25 ARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDAL 83
A F +++ A K K + N K F+IYR+NP++P +KP +++F+++L +CG M+LDAL
Sbjct: 34 ASFPSTDDVAAKT--KKTGNR-IKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDAL 90
Query: 84 IKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVI 142
IKIK+E+DP+LTFRRSCREGICGSCAMNI G N LAC+ KI S ST I PLPHMFV+
Sbjct: 91 IKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVV 150
Query: 143 KDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSC 202
KDLV DM FY QY SI+PW+++K P + K++ QS +R +LDG+YECILCACCSTSC
Sbjct: 151 KDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSC 210
Query: 203 PSYWWTSEAYLGPAALLHA 221
PSYWW ++ YLGPA L+ A
Sbjct: 211 PSYWWNADKYLGPAVLMQA 229
>UNIPROTKB|Q09545 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6239 "Caenorhabditis
elegans" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 117/199 (58%), Positives = 152/199 (76%)
Query: 25 ARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDAL 83
A F +++ A K K + N K F+IYR+NP++P +KP +++F+++L +CG M+LDAL
Sbjct: 34 ASFPSTDDVAAKT--KKTGNR-IKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDAL 90
Query: 84 IKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVI 142
IKIK+E+DP+LTFRRSCREGICGSCAMNI G N LAC+ KI S ST I PLPHMFV+
Sbjct: 91 IKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVV 150
Query: 143 KDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSC 202
KDLV DM FY QY SI+PW+++K P + K++ QS +R +LDG+YECILCACCSTSC
Sbjct: 151 KDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSC 210
Query: 203 PSYWWTSEAYLGPAALLHA 221
PSYWW ++ YLGPA L+ A
Sbjct: 211 PSYWWNADKYLGPAVLMQA 229
>GENEDB_PFALCIPARUM|PFL0630w [details] [associations]
symbol:PFL0630w "iron-sulfur subunit of
succinate dehydrogenase" species:5833 "Plasmodium falciparum"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 112/175 (64%), Positives = 138/175 (78%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
KKF I+R+NP + +P+++ FE+++ CGPMVLD LIKIK EID +L+FRRSCREGICGS
Sbjct: 68 KKFSIFRYNPTNKKRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGICGS 127
Query: 108 CAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK 166
CAMNI+G NGLACLT+++ T I PLP+++V+KDLV D+TNFYNQYKSI+PWLKRK
Sbjct: 128 CAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKRK 187
Query: 167 NPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
KE QS +DR KLDG+YECI+CA CSTSCPSYWW E YLGPA L+ A
Sbjct: 188 TKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQA 242
>UNIPROTKB|Q8I5S5 [details] [associations]
symbol:PFL0630w "Iron-sulfur subunit of succinate
dehydrogenase" species:36329 "Plasmodium falciparum 3D7"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 112/175 (64%), Positives = 138/175 (78%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
KKF I+R+NP + +P+++ FE+++ CGPMVLD LIKIK EID +L+FRRSCREGICGS
Sbjct: 68 KKFSIFRYNPTNKKRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFRRSCREGICGS 127
Query: 108 CAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK 166
CAMNI+G NGLACLT+++ T I PLP+++V+KDLV D+TNFYNQYKSI+PWLKRK
Sbjct: 128 CAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQYKSIDPWLKRK 187
Query: 167 NPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
KE QS +DR KLDG+YECI+CA CSTSCPSYWW E YLGPA L+ A
Sbjct: 188 TKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPATLMQA 242
>UNIPROTKB|Q3T189 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:BC102067 IPI:IPI00693011
RefSeq:NP_001035573.1 UniGene:Bt.13128 ProteinModelPortal:Q3T189
SMR:Q3T189 IntAct:Q3T189 STRING:Q3T189 PRIDE:Q3T189
Ensembl:ENSBTAT00000010949 GeneID:286840 KEGG:bta:286840 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 InParanoid:Q3T189
OrthoDB:EOG4T4CW4 NextBio:20806491 ArrayExpress:Q3T189
Uniprot:Q3T189
Length = 280
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 121/184 (65%), Positives = 142/184 (77%)
Query: 41 ASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRS 99
A+A KKF IYRW+PD KP ++ +EI+L CGPMVLDALIKIK+EID +LTFRRS
Sbjct: 33 AAAAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRS 92
Query: 100 CREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKS 158
CREGICGSCAMNI+G N LAC +I + S S I PLPHM+VIKDLV D++NFY QYKS
Sbjct: 93 CREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKS 152
Query: 159 IEPWLKRKNPPPMPGKE-IPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAA 217
IEP+LK+K+ GKE QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA
Sbjct: 153 IEPYLKKKDES-QGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAV 211
Query: 218 LLHA 221
L+ A
Sbjct: 212 LMQA 215
>MGI|MGI:1914930 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B,
iron sulfur (Ip)" species:10090 "Mus musculus" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;IDA] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=IDA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0006105 "succinate metabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=ISO]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0022904 "respiratory electron transport chain" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 MGI:MGI:1914930 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:AK003052 EMBL:AK003533 EMBL:AK009660 EMBL:AK153045
EMBL:AK169252 EMBL:BC013509 EMBL:BC051934 IPI:IPI00338536
PIR:PT0094 RefSeq:NP_075863.2 UniGene:Mm.246965
ProteinModelPortal:Q9CQA3 SMR:Q9CQA3 IntAct:Q9CQA3 STRING:Q9CQA3
PhosphoSite:Q9CQA3 REPRODUCTION-2DPAGE:Q9CQA3 PaxDb:Q9CQA3
PRIDE:Q9CQA3 Ensembl:ENSMUST00000010007 GeneID:67680 KEGG:mmu:67680
InParanoid:Q9CQA3 ChiTaRS:SDHB NextBio:325239 Bgee:Q9CQA3
Genevestigator:Q9CQA3 GermOnline:ENSMUSG00000009863 Uniprot:Q9CQA3
Length = 282
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 120/205 (58%), Positives = 148/205 (72%)
Query: 19 PARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGP 77
PA +L R + + A+A KKF IYRW+PD KP ++ +E++L +CGP
Sbjct: 14 PAAVL-GRVGLQFQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGP 72
Query: 78 MVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPL 136
MVLDALIKIK+E+D +LTFRRSCREGICGSCAMNI+G N LAC +I S S I PL
Sbjct: 73 MVLDALIKIKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLSKVSKIYPL 132
Query: 137 PHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCA 196
PHM+VIKDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCA
Sbjct: 133 PHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCA 192
Query: 197 CCSTSCPSYWWTSEAYLGPAALLHA 221
CCSTSCPSYWW + YLGPA L+ A
Sbjct: 193 CCSTSCPSYWWNGDKYLGPAVLMQA 217
>UNIPROTKB|F1Q3W8 [details] [associations]
symbol:SDHB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:AAEX03001846 EMBL:AAEX03001845
RefSeq:NP_001239146.1 Ensembl:ENSCAFT00000025080 GeneID:478217
KEGG:cfa:478217 Uniprot:F1Q3W8
Length = 280
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 116/176 (65%), Positives = 139/176 (78%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD KP ++ +EI+L +CGPMVLDALIKIK+EID +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>RGD|1308598 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B, iron
sulfur (Ip)" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS;IDA] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISO;ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0006105 "succinate
metabolic process" evidence=IMP] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IMP] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0022904 "respiratory
electron transport chain" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 RGD:1308598 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:CH473968 EMBL:BC158620 EMBL:DQ403001 IPI:IPI00785564
PIR:B32394 RefSeq:NP_001094009.1 UniGene:Rn.3902
ProteinModelPortal:P21913 SMR:P21913 STRING:P21913
PhosphoSite:P21913 PRIDE:P21913 Ensembl:ENSRNOT00000010593
GeneID:298596 KEGG:rno:298596 UCSC:RGD:1308598 InParanoid:Q0QEZ3
SABIO-RK:P21913 NextBio:644032 Genevestigator:P21913
GermOnline:ENSRNOG00000007967 Uniprot:P21913
Length = 282
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 115/189 (60%), Positives = 143/189 (75%)
Query: 35 QKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPS 93
++ + A+A K F IYRW+PD KP ++ ++++L +CGPMVLDALIKIK+EID +
Sbjct: 29 REAQTAAAAAPRIKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDST 88
Query: 94 LTFRRSCREGICGSCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNF 152
LTFRRSCREGICGSCAMNI+G N LAC +I G S I PLPHM+VIKDLV D++NF
Sbjct: 89 LTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNF 148
Query: 153 YNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAY 212
Y QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + Y
Sbjct: 149 YAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKY 208
Query: 213 LGPAALLHA 221
LGPA L+ A
Sbjct: 209 LGPAVLMQA 217
>UNIPROTKB|I3LDC1 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0016491 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
GeneTree:ENSGT00390000013558 EMBL:FP565627
Ensembl:ENSSSCT00000027692 Uniprot:I3LDC1
Length = 280
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 114/176 (64%), Positives = 137/176 (77%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD KP ++ +EI+L CGPMVLDALIKIK+EID +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>UNIPROTKB|P21912 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS;TAS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=TAS]
[GO:0022904 "respiratory electron transport chain" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] Reactome:REACT_111217
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0044281 GO:GO:0009055 GO:GO:0046872
EMBL:CH471134 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 DrugBank:DB00139 EMBL:AL049569 GO:GO:0022904
GO:GO:0005749 MIM:606864 Orphanet:97286 Orphanet:29072
GO:GO:0048039 GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP CTD:6390 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:U17248 EMBL:U17886 EMBL:U17296 EMBL:U17880 EMBL:U17881
EMBL:U17882 EMBL:U17883 EMBL:U17884 EMBL:U17885 EMBL:AK312056
EMBL:BC007840 EMBL:D10245 EMBL:M32246 IPI:IPI00294911 PIR:I38895
RefSeq:NP_002991.2 UniGene:Hs.465924 ProteinModelPortal:P21912
SMR:P21912 IntAct:P21912 STRING:P21912 PhosphoSite:P21912
DMDM:20455488 UCD-2DPAGE:P21912 PaxDb:P21912 PeptideAtlas:P21912
PRIDE:P21912 DNASU:6390 Ensembl:ENST00000375499 GeneID:6390
KEGG:hsa:6390 UCSC:uc001bae.3 GeneCards:GC01M017345 HGNC:HGNC:10681
HPA:CAB009822 HPA:HPA002867 HPA:HPA002868 MIM:115310 MIM:171300
MIM:185470 MIM:612359 neXtProt:NX_P21912 Orphanet:201
PharmGKB:PA35606 InParanoid:P21912 PhylomeDB:P21912
BioCyc:MetaCyc:ENSG00000117118-MONOMER GenomeRNAi:6390
NextBio:24824 ArrayExpress:P21912 Bgee:P21912 CleanEx:HS_SDHB
Genevestigator:P21912 GermOnline:ENSG00000117118 Uniprot:P21912
Length = 280
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 112/176 (63%), Positives = 138/176 (78%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD KP ++ +E++L +CGPMVLDALIKIK+E+D +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>UNIPROTKB|Q007T0 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0048039 "ubiquinone binding" evidence=IDA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 PDB:1ZOY PDB:1ZP0 PDB:3ABV
PDB:3AE1 PDB:3AE2 PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7
PDB:3AE8 PDB:3AE9 PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE
PDB:3AEF PDB:3AEG PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0
PDBsum:3ABV PDBsum:3AE1 PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4
PDBsum:3AE5 PDBsum:3AE6 PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9
PDBsum:3AEA PDBsum:3AEB PDBsum:3AEC PDBsum:3AED PDBsum:3AEE
PDBsum:3AEF PDBsum:3AEG PDBsum:3SFD PDBsum:3SFE GO:GO:0048039
GO:GO:0008177 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 EMBL:DQ915498 EMBL:DQ403018
RefSeq:NP_001098423.1 UniGene:Ssc.55804 ProteinModelPortal:Q007T0
SMR:Q007T0 PRIDE:Q007T0 GeneID:414412 KEGG:ssc:414412
EvolutionaryTrace:Q007T0 Uniprot:Q007T0
Length = 280
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 114/176 (64%), Positives = 137/176 (77%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD KP ++ +EI+L CGPMVLDALIKIK+EID +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>TIGR_CMR|ECH_0316 [details] [associations]
symbol:ECH_0316 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_507137.1 ProteinModelPortal:Q2GHE6 SMR:Q2GHE6
STRING:Q2GHE6 GeneID:3927401 KEGG:ech:ECH_0316 PATRIC:20576135
OMA:MVQFSLP BioCyc:ECHA205920:GJNR-316-MONOMER Uniprot:Q2GHE6
Length = 258
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 115/186 (61%), Positives = 136/186 (73%)
Query: 36 KVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLT 95
KV + K F+IYRW+PD P + F I+L ECG MVLDALIKIK+E+D +LT
Sbjct: 17 KVHHARKGAKNVKCFKIYRWSPDDDENPRIDTFFIDLDECGQMVLDALIKIKNEVDSTLT 76
Query: 96 FRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQ 155
FRRSCREGICGSCAMNIDG N LAC IS S I PLPHM VIKDLV D++NFY Q
Sbjct: 77 FRRSCREGICGSCAMNIDGTNTLACTKAISDIKSDVNIYPLPHMHVIKDLVPDLSNFYKQ 136
Query: 156 YKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGP 215
Y+S+ PW++ + P KE Q+ +DR+KLDG+Y+CILCACCSTSCPSYWW S+ YLGP
Sbjct: 137 YESVTPWIQAEEPNH--NKERLQTIEDRSKLDGIYDCILCACCSTSCPSYWWNSDKYLGP 194
Query: 216 AALLHA 221
AALL A
Sbjct: 195 AALLQA 200
>TIGR_CMR|SPO_0361 [details] [associations]
symbol:SPO_0361 "succinate dehydrogenase, iron-sulfur
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
OMA:LIVDMEP RefSeq:YP_165624.1 ProteinModelPortal:Q5LXE7 SMR:Q5LXE7
GeneID:3196472 KEGG:sil:SPO0361 PATRIC:23373981 Uniprot:Q5LXE7
Length = 259
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 110/186 (59%), Positives = 135/186 (72%)
Query: 36 KVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLT 95
K PK T+ +KFQIYRWNPD P + + +++ +CGPMVLDALI IK+++D +LT
Sbjct: 16 KTWPKPEGATNLRKFQIYRWNPDDGQNPRVDTYFVDMDDCGPMVLDALIYIKNKVDATLT 75
Query: 96 FRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQ 155
FRRSCREGICGSCAMNIDG N LAC+ + I PLPHM V+KDL+ D+T+FY Q
Sbjct: 76 FRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMPVVKDLIPDLTHFYAQ 135
Query: 156 YKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGP 215
+ SI PWL+ K P KE QS +DR KLDG+YEC++CA CSTSCPSYWW + YLGP
Sbjct: 136 HASIMPWLETKTN--RPAKEWKQSIEDRRKLDGLYECVMCASCSTSCPSYWWNGDRYLGP 193
Query: 216 AALLHA 221
AALLHA
Sbjct: 194 AALLHA 199
>DICTYBASE|DDB_G0270120 [details] [associations]
symbol:sdhB "succinate dehydrogenase (ubiquinone)"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA;ISS] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=ISS] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 dictyBase:DDB_G0270120 Prosite:PS00198
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP RefSeq:XP_646559.1 HSSP:Q9YHT2
ProteinModelPortal:Q55CC2 SMR:Q55CC2 STRING:Q55CC2 PRIDE:Q55CC2
EnsemblProtists:DDB0231383 GeneID:8617527 KEGG:ddi:DDB_G0270120
ProtClustDB:CLSZ2431440 Uniprot:Q55CC2
Length = 287
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 114/204 (55%), Positives = 149/204 (73%)
Query: 24 TARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDAL 83
TA+ AS + K++ A FQ+YR+N ++ +KP ++ + INLK+CGPMVLDAL
Sbjct: 26 TAKTEASSSPQMKIKT-AEKKDHFVNFQVYRYNEETTAKPYIQTYNINLKDCGPMVLDAL 84
Query: 84 IKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP--SGSASTITPLPHMFV 141
+ IK+ IDP+L+FRRSCREGICGSCAMN++G N LAC KI+ SG + PLPHM V
Sbjct: 85 LLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTLACTKKITDCLSGDTVKVYPLPHMHV 144
Query: 142 IKDLVVDMTNFYNQYKSIEPWLKRK-NPPPMPGKEIPQSKKDRAKLDGMYECILCACCST 200
++DL+ D+++FY Q+KSI+PWL+ + P GKEI QSK++R KLDG+YECILCACCST
Sbjct: 145 VRDLIPDLSHFYTQHKSIKPWLEPAVDVPRYNGKEILQSKENRHKLDGLYECILCACCST 204
Query: 201 SCPSYWWTSEA---YLGPAALLHA 221
SCPSYWW+ YLGPA LL A
Sbjct: 205 SCPSYWWSEGGDGGYLGPAVLLQA 228
>FB|FBgn0030975 [details] [associations]
symbol:CG7349 species:7227 "Drosophila melanogaster"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 eggNOG:COG0479 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 HSSP:P07014 EMBL:AY089563
ProteinModelPortal:Q8SXL9 SMR:Q8SXL9 STRING:Q8SXL9 PaxDb:Q8SXL9
PRIDE:Q8SXL9 FlyBase:FBgn0030975 InParanoid:Q8SXL9
OrthoDB:EOG41JWTV ArrayExpress:Q8SXL9 Bgee:Q8SXL9 Uniprot:Q8SXL9
Length = 437
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 108/190 (56%), Positives = 139/190 (73%)
Query: 34 AQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPS 93
A+ P + K F+IYRW P +P+ + +E++L++CG MVLDALIKIK+E+DP+
Sbjct: 174 AKSAPPVKAKKQRLKTFEIYRWKPGD--QPQTQTYEVDLEQCGAMVLDALIKIKNEMDPT 231
Query: 94 LTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNF 152
LTFRRSCREGICGSCAMNI+G N LAC++ I + S I PLPH++V++DLV DM+ F
Sbjct: 232 LTFRRSCREGICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQF 291
Query: 153 YNQYKSIEPWLKRKNPPPMPGK-EIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEA 211
Y+QY+SI+PWL+RK+ G + QS DR LDG+YECILCACC TSCPSYWW S
Sbjct: 292 YDQYRSIQPWLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNK 351
Query: 212 YLGPAALLHA 221
YLGPA L+ A
Sbjct: 352 YLGPAVLMQA 361
>TIGR_CMR|APH_0159 [details] [associations]
symbol:APH_0159 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 108/170 (63%), Positives = 126/170 (74%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCA 109
F+IYRW+PD P + + I+L +CG MVLDALIK+K+E D +LTFRRSCREGICGSCA
Sbjct: 31 FKIYRWSPDDGENPRIDTYYIDLDKCGQMVLDALIKVKNEYDSTLTFRRSCREGICGSCA 90
Query: 110 MNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP 169
MNIDG N LAC IS I PLPHM VIKDLV D++NFY QYKSI PWLK +
Sbjct: 91 MNIDGTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLK-SDGA 149
Query: 170 PMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALL 219
+E QS +DR+KLD +Y+CILCACCSTSCPSYWW + YLGPAALL
Sbjct: 150 RSDREEHLQSIEDRSKLDKVYDCILCACCSTSCPSYWWNPDKYLGPAALL 199
>TIGR_CMR|APH_0162 [details] [associations]
symbol:APH_0162 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 108/170 (63%), Positives = 126/170 (74%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCA 109
F+IYRW+PD P + + I+L +CG MVLDALIK+K+E D +LTFRRSCREGICGSCA
Sbjct: 31 FKIYRWSPDDGENPRIDTYYIDLDKCGQMVLDALIKVKNEYDSTLTFRRSCREGICGSCA 90
Query: 110 MNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP 169
MNIDG N LAC IS I PLPHM VIKDLV D++NFY QYKSI PWLK +
Sbjct: 91 MNIDGTNTLACTKYISDIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLK-SDGA 149
Query: 170 PMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALL 219
+E QS +DR+KLD +Y+CILCACCSTSCPSYWW + YLGPAALL
Sbjct: 150 RSDREEHLQSIEDRSKLDKVYDCILCACCSTSCPSYWWNPDKYLGPAALL 199
>TIGR_CMR|NSE_0534 [details] [associations]
symbol:NSE_0534 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_506417.1 ProteinModelPortal:Q2GDM9 SMR:Q2GDM9
STRING:Q2GDM9 GeneID:3932205 KEGG:nse:NSE_0534 PATRIC:22681115
OMA:PSHAIER BioCyc:NSEN222891:GHFU-553-MONOMER Uniprot:Q2GDM9
Length = 254
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 105/199 (52%), Positives = 137/199 (68%)
Query: 25 ARFHASEAEAQKVEPKA--SANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDA 82
A+F E ++ VE K S ++D +K +YR++P + P + +N K+C PM+LDA
Sbjct: 2 AQFRLPE-NSRIVEGKVHNSPSSDARKLVVYRFSPGDDN-PRRDIYYVNQKDCAPMILDA 59
Query: 83 LIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVI 142
LIK+K EIDP+LTFRRSCREG+CGSCAMNIDG N LAC ++ I PLPHM V+
Sbjct: 60 LIKVKGEIDPTLTFRRSCREGVCGSCAMNIDGRNTLACTKRMDEIKGEIRIYPLPHMRVL 119
Query: 143 KDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSC 202
KDLV D+T F+ Y+SI+PWL + GKE Q ++R KL G+++CILCACCSTSC
Sbjct: 120 KDLVTDLTVFFQHYRSIKPWLHSEKSNN--GKEHLQMPEEREKLAGLHDCILCACCSTSC 177
Query: 203 PSYWWTSEAYLGPAALLHA 221
PS+WW + YLGPAALL A
Sbjct: 178 PSFWWNGDKYLGPAALLQA 196
>TIGR_CMR|SO_1929 [details] [associations]
symbol:SO_1929 "succinate dehydrogenase, iron-sulfur
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0008177
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 HSSP:P07014 RefSeq:NP_717536.1
ProteinModelPortal:Q8EFP1 SMR:Q8EFP1 GeneID:1169691
KEGG:son:SO_1929 PATRIC:23523491 Uniprot:Q8EFP1
Length = 235
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 92/175 (52%), Positives = 127/175 (72%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKE-CGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+F +YR+NPD +KP ++++ + + + MVLDALIK+K E DP+L FRRSCREG+CGS
Sbjct: 4 EFAVYRYNPDVDTKPYMQDYSLEVADGTDMMVLDALIKLK-EKDPTLVFRRSCREGVCGS 62
Query: 108 CAMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK 166
+N++G NGLAC+T +S G I PLP M V++DLVVD+T FY QY+ I+P+L
Sbjct: 63 DGLNMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPFLI-- 120
Query: 167 NPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
N P +E QS + RA LDG+YECI+CACCST+CPS+WW + ++GP+ LLHA
Sbjct: 121 NDDKQPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHA 175
>UNIPROTKB|Q9KQB2 [details] [associations]
symbol:VC_2088 "Succinate dehydrogenase, iron-sulfur
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0045282
"plasma membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 89/174 (51%), Positives = 126/174 (72%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F +YR+NPD +KP +K++ + ++E M VLDALI +K + DPS+ FRRSCREG+CGS
Sbjct: 5 FSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQ-DPSIAFRRSCREGVCGSD 63
Query: 109 AMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
+N++G NGLAC+T +S G I PLP + V++DL+VDMT FY+ Y ++P+L +
Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADD 123
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P +E QS ++RA LDG+YECI+CACC+TSCPS+WW + ++GPA LL A
Sbjct: 124 ALP-PSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAA 176
>TIGR_CMR|VC_2088 [details] [associations]
symbol:VC_2088 "succinate dehydrogenase, iron-sulfur
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 89/174 (51%), Positives = 126/174 (72%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F +YR+NPD +KP +K++ + ++E M VLDALI +K + DPS+ FRRSCREG+CGS
Sbjct: 5 FSLYRYNPDVDNKPYMKDYILEVEEGSDMMVLDALILLKEQ-DPSIAFRRSCREGVCGSD 63
Query: 109 AMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
+N++G NGLAC+T +S G I PLP + V++DL+VDMT FY+ Y ++P+L +
Sbjct: 64 GLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPFLIADD 123
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P +E QS ++RA LDG+YECI+CACC+TSCPS+WW + ++GPA LL A
Sbjct: 124 ALP-PSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAA 176
>TIGR_CMR|CPS_2218 [details] [associations]
symbol:CPS_2218 "succinate dehydrogenase, iron-sulfur
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 RefSeq:YP_268943.1
ProteinModelPortal:Q482S4 SMR:Q482S4 STRING:Q482S4 GeneID:3518711
KEGG:cps:CPS_2218 PATRIC:21467547
BioCyc:CPSY167879:GI48-2288-MONOMER Uniprot:Q482S4
Length = 235
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 92/174 (52%), Positives = 125/174 (71%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGP-MVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F IYR+NPD + P +K++E+ + E MVLDALI +K E D SL+FRRSCREG+CGS
Sbjct: 5 FSIYRYNPDVDNAPYMKDYELEVPEGSDLMVLDALILLK-ETDSSLSFRRSCREGVCGSD 63
Query: 109 AMNIDGCNGLACLTKISPSGSASTIT-PLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
+N++G NGLAC+T +S + I PLP + V++DL++DMT FY QY+ I+P+L
Sbjct: 64 GLNMNGKNGLACITPLSELKADKIILRPLPGLPVVRDLIIDMTQFYQQYEKIKPYLINDA 123
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P +E Q+ ++R KLDG+YECILCACCSTSCPS+WW + ++GPA LLHA
Sbjct: 124 QPA--ARENIQTIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHA 175
>UNIPROTKB|P07014 [details] [associations]
symbol:sdhB "succinate dehydrogenase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA;IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009060
"aerobic respiration" evidence=IEP] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 GO:GO:0009060
Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:J01619 EMBL:X01070 PDB:1NEK
PDB:1NEN PDB:2ACZ PDB:2AD0 PDB:2WDQ PDB:2WDR PDB:2WDV PDB:2WP9
PDB:2WS3 PDB:2WU2 PDB:2WU5 PDBsum:1NEK PDBsum:1NEN PDBsum:2ACZ
PDBsum:2AD0 PDBsum:2WDQ PDBsum:2WDR PDBsum:2WDV PDBsum:2WP9
PDBsum:2WS3 PDBsum:2WU2 PDBsum:2WU5 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 EMBL:X00661 PIR:A28837
RefSeq:NP_415252.1 RefSeq:YP_489004.1 ProteinModelPortal:P07014
SMR:P07014 DIP:DIP-10836N IntAct:P07014 PRIDE:P07014
EnsemblBacteria:EBESCT00000004560 EnsemblBacteria:EBESCT00000004561
EnsemblBacteria:EBESCT00000017526 GeneID:12932956 GeneID:945300
KEGG:ecj:Y75_p0704 KEGG:eco:b0724 PATRIC:32116643 EchoBASE:EB0925
EcoGene:EG10932 BioCyc:EcoCyc:SDH-FE-S
BioCyc:ECOL316407:JW0714-MONOMER BioCyc:MetaCyc:SDH-FE-S
EvolutionaryTrace:P07014 Genevestigator:P07014 Uniprot:P07014
Length = 238
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/177 (53%), Positives = 122/177 (68%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVL-DALIKIKSEIDPSLTFRRSCREGICGS 107
+F IYR+NPD P ++++ + E M+L DALI++K E DPSL+FRRSCREG+CGS
Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62
Query: 108 CAMNIDGCNGLACLTKISP---SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 164
+N++G NGLAC+T IS G I PLP + VI+DLVVDM FY QY+ I+P+L
Sbjct: 63 DGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLL 122
Query: 165 RKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P +E Q + R KLDG+YECILCACCSTSCPS+WW + ++GPA LL A
Sbjct: 123 NNGQNP-PAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAA 178
>UNIPROTKB|Q4KFZ0 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GO:GO:0009055 GO:GO:0006099
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:DAAPFMQ RefSeq:YP_258843.1
ProteinModelPortal:Q4KFZ0 SMR:Q4KFZ0 STRING:Q4KFZ0 GeneID:3478177
KEGG:pfl:PFL_1717 PATRIC:19872663
BioCyc:PFLU220664:GIX8-1725-MONOMER Uniprot:Q4KFZ0
Length = 234
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 90/173 (52%), Positives = 122/173 (70%)
Query: 51 QIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAM 110
++YR+NPD+ S P+ + F+++ MVLD L IK + D ++RRSCREG+CGS M
Sbjct: 5 EVYRYNPDTDSAPKTQVFQVDTGGKDLMVLDVLALIKEQ-DEGFSYRRSCREGVCGSDGM 63
Query: 111 NIDGCNGLACLTKISP--SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
NI+G NGLAC+T +S + + PLP + VI+DLVVDM+ FY QY+ ++P+L+ N
Sbjct: 64 NINGKNGLACITPLSAVVKKNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ--ND 121
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P E QS ++R KLDG+YECILCACCSTSCPS+WW + +LGPAALL A
Sbjct: 122 TPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQA 174
>UNIPROTKB|Q48K72 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000104
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_274203.1 ProteinModelPortal:Q48K72 SMR:Q48K72
STRING:Q48K72 GeneID:3555647 KEGG:psp:PSPPH_1979 PATRIC:19973160
OMA:DAAPFMQ Uniprot:Q48K72
Length = 234
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 87/172 (50%), Positives = 122/172 (70%)
Query: 52 IYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMN 111
+YR+NP+ + P ++EF+++ MVLD L +K + D ++RRSCREG+CGS MN
Sbjct: 6 VYRYNPEQDAAPFMQEFQVDTGGKDLMVLDVLALVKEQ-DQGFSYRRSCREGVCGSDGMN 64
Query: 112 IDGCNGLACLTKISP--SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP 169
I+G NGLAC+T +S + + + PLP + VI+DLVVDM+ FY QY+ ++P+L+ N
Sbjct: 65 INGKNGLACITPLSAVVAKNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQ--NDT 122
Query: 170 PMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P E Q+ ++R KLDG+YECILCACCSTSCPS+WW + +LGPAALL A
Sbjct: 123 PAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQA 174
>TIGR_CMR|CBU_1400 [details] [associations]
symbol:CBU_1400 "succinate dehydrogenase, iron-sulfur
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:L33409
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:X77919 PIR:S42873
RefSeq:NP_820385.1 ProteinModelPortal:P51053 SMR:P51053
PRIDE:P51053 GeneID:1209306 KEGG:cbu:CBU_1400 PATRIC:17931557
KO:K00240 ProtClustDB:PRK05950 BioCyc:CBUR227377:GJ7S-1388-MONOMER
Uniprot:P51053
Length = 235
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 84/171 (49%), Positives = 117/171 (68%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKEC-GPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F I R+NP++ KP +++FE+++ G M+L+AL ++ E P + RRSC EG+CGS
Sbjct: 3 FSIMRFNPETDKKPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCGSD 61
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
MNI+G N LAC+T++ + PLP +I+DL+VDM FY QYK ++P+L N
Sbjct: 62 GMNINGKNALACVTQLKDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYLL--ND 119
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALL 219
P KE QS ++RAKLDG+YECILCACCS+SCPSYWW + ++GPA LL
Sbjct: 120 QEAPQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLL 170
>UNIPROTKB|O53371 [details] [associations]
symbol:sdhB "Succinate dehydrogenase and fumarate reductase
iron-sulfur protein" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051536 EMBL:BX842582 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:LIVDMEP HSSP:P07014 EMBL:CP003248
PIR:F70843 RefSeq:NP_217836.1 RefSeq:NP_337948.1
RefSeq:YP_006516798.1 SMR:O53371 EnsemblBacteria:EBMYCT00000002372
EnsemblBacteria:EBMYCT00000071457 GeneID:13318144 GeneID:887562
GeneID:926326 KEGG:mtc:MT3420 KEGG:mtu:Rv3319 KEGG:mtv:RVBD_3319
PATRIC:18129270 TubercuList:Rv3319 Uniprot:O53371
Length = 263
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 78/182 (42%), Positives = 110/182 (60%)
Query: 51 QIYRWNPDSPSK-PELKEFEINLKECGPM--VLDALIKIKSEIDPSLTFRRSCREGICGS 107
+I R+NPD P ++ C P +L+ LI IK +D +LTFRRSC G+CGS
Sbjct: 27 KIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAHGVCGS 86
Query: 108 CAMNIDGCNGLAC---LTKISPS--GSASTIT--PLPHMFVIKDLVVDMTNFYNQYKSIE 160
AM I+G N LAC + + P G + T+T P+ + V KDLVVDM F++ Y++I+
Sbjct: 87 DAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYRAIK 146
Query: 161 PWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLH 220
P+L PP +E QS DRA+ D +CILCACC+TSCP +W +Y GPAA+++
Sbjct: 147 PYLITSGNPPT--RERIQSPTDRARYDDTTKCILCACCTTSCPVFWHEG-SYFGPAAIVN 203
Query: 221 AN 222
A+
Sbjct: 204 AH 205
>TIGR_CMR|CHY_1370 [details] [associations]
symbol:CHY_1370 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 ProtClustDB:PRK05950 KO:K00245
RefSeq:YP_360202.1 ProteinModelPortal:Q3ACD2 STRING:Q3ACD2
GeneID:3727625 KEGG:chy:CHY_1370 PATRIC:21275873 OMA:NLNPARA
BioCyc:CHYD246194:GJCN-1369-MONOMER Uniprot:Q3ACD2
Length = 263
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 66/183 (36%), Positives = 99/183 (54%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
+F+I+R++P +P +++ ++KE G VLD L IK ID +L FR SCR GICGSC
Sbjct: 4 RFKIWRYDPAKDVQPYFQDYTFDVKE-GMTVLDCLYYIKENIDATLAFRASCRMGICGSC 62
Query: 109 AMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
AM I+ LAC T+ G+ I PLP+ IKDLV D+T + ++K+++P++ +N
Sbjct: 63 AMYINKKPRLACETQALSLGTDVIEIAPLPNYKNIKDLVPDLTPLFEKHKNVKPYVIPEN 122
Query: 168 PPPM--PGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIG 225
P E Q+ + + CI C C +CP+ T + + GP AL A
Sbjct: 123 EQEFINPTGEYSQTPAELEEYLQFAYCIKCGACLAACPTVGTTPD-FPGPQALAQAYRYN 181
Query: 226 LSN 228
N
Sbjct: 182 ADN 184
>UNIPROTKB|Q9KNS4 [details] [associations]
symbol:VC_2657 "Fumarate reductase, iron-sulfur protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 60/181 (33%), Positives = 98/181 (54%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+K I R++P + ++P ++ FE+ E VLDA+ +K +D L++R SCR ICGS
Sbjct: 7 QKVDILRYDPANDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRMAICGS 65
Query: 108 CAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
C + ++G LAC + + I PL + + KDL+VDMT F + ++I+P++ +
Sbjct: 66 CGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGND 125
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLS 227
P G + Q+ + A+ CI C C +CP + E +LGPAAL A+ L
Sbjct: 126 RKPEDGTNL-QTPEQMARYKQFAGCINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLD 183
Query: 228 N 228
+
Sbjct: 184 S 184
>TIGR_CMR|VC_2657 [details] [associations]
symbol:VC_2657 "fumarate reductase, iron-sulfur protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 60/181 (33%), Positives = 98/181 (54%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+K I R++P + ++P ++ FE+ E VLDA+ +K +D L++R SCR ICGS
Sbjct: 7 QKVDILRYDPANDAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRMAICGS 65
Query: 108 CAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
C + ++G LAC + + I PL + + KDL+VDMT F + ++I+P++ +
Sbjct: 66 CGIMVNGVPKLACKSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGND 125
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLS 227
P G + Q+ + A+ CI C C +CP + E +LGPAAL A+ L
Sbjct: 126 RKPEDGTNL-QTPEQMARYKQFAGCINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLD 183
Query: 228 N 228
+
Sbjct: 184 S 184
>UNIPROTKB|P0AC47 [details] [associations]
symbol:frdB "fumarate reductase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0016020 "membrane"
evidence=IDA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009296
"flagellum assembly" evidence=IMP] [GO:0001539 "ciliary or
flagellar motility" evidence=IMP] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0009061 "anaerobic respiration" evidence=IMP] [GO:0006113
"fermentation" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0016020 GO:GO:0009055 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0006113
GO:GO:0009061 GO:GO:0051538 EMBL:U14003 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:J01611 EMBL:V00277 GO:GO:0009296
GO:GO:0000104 GO:GO:0001539 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 PDB:1KF6 PDB:1KFY PDB:1L0V
PDB:2B76 PDB:3CIR PDB:3P4P PDB:3P4Q PDB:3P4R PDB:3P4S PDBsum:1KF6
PDBsum:1KFY PDBsum:1L0V PDBsum:2B76 PDBsum:3CIR PDBsum:3P4P
PDBsum:3P4Q PDBsum:3P4R PDBsum:3P4S PIR:A00377 RefSeq:NP_418577.1
RefSeq:YP_492298.1 ProteinModelPortal:P0AC47 SMR:P0AC47
IntAct:P0AC47 PRIDE:P0AC47 EnsemblBacteria:EBESCT00000004418
EnsemblBacteria:EBESCT00000017881 GeneID:12933707 GeneID:948666
KEGG:ecj:Y75_p4042 KEGG:eco:b4153 PATRIC:32123879 EchoBASE:EB0327
EcoGene:EG10331 KO:K00245 OMA:NPRTPDQ ProtClustDB:PRK12385
BioCyc:EcoCyc:FUM-FE-S BioCyc:ECOL316407:JW4114-MONOMER
BioCyc:MetaCyc:FUM-FE-S EvolutionaryTrace:P0AC47
Genevestigator:P0AC47 Uniprot:P0AC47
Length = 244
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 56/174 (32%), Positives = 89/174 (51%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP+ + P +E+ + +LDAL IK + P L++R SCR ICGSC
Sbjct: 8 KIEVVRYNPEVDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
M ++ LAC T + + L + + +DLVVDMT+F ++I+P++ +
Sbjct: 67 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 126
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
G I Q+ AK CI C C +CP + E ++GPAA+ A+
Sbjct: 127 TADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAH 178
>TIGR_CMR|SO_0399 [details] [associations]
symbol:SO_0399 "fumarate reductase iron-sulfur protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=ISS] [GO:0009061 "anaerobic respiration"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245 HSSP:P17596
ProtClustDB:PRK13552 RefSeq:NP_716037.1 ProteinModelPortal:Q8EJR3
SMR:Q8EJR3 GeneID:1168276 KEGG:son:SO_0399 PATRIC:23520501
OMA:CRTLTSK Uniprot:Q8EJR3
Length = 243
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 59/175 (33%), Positives = 93/175 (53%)
Query: 50 FQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F I+R++P P+ KP++ +++ + G V AL K++ E D SL F CR GICGSC
Sbjct: 9 FNIFRYDPQEPNDKPKMVRYQLT-ETPGMTVFIALNKLREEQDTSLQFDFVCRAGICGSC 67
Query: 109 AMNIDGCNGLAC--LTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQY-KSIEPWLKR 165
AM I+G LAC LT P G T+ PLP +I DL V+ F + + ++ WL
Sbjct: 68 AMVINGFPTLACRTLTAKYPKGEI-TLMPLPGFELIGDLSVNTGKFMRELAERLKLWLHP 126
Query: 166 K-NPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALL 219
K N + E P + ++ A+L + C+ C C ++C + E ++G ++
Sbjct: 127 KANDISIHRLEEPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGMM 180
>TIGR_CMR|CJE_0459 [details] [associations]
symbol:CJE_0459 "fumarate reductase, iron-sulfur protein
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] [GO:0045284 "plasma membrane fumarate
reductase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:CRTLTKD KO:K00245 PIR:H81384
RefSeq:YP_178478.1 ProteinModelPortal:Q5HW57 SMR:Q5HW57
STRING:Q5HW57 GeneID:3231221 KEGG:cjr:CJE0459 PATRIC:20042618
ProtClustDB:PRK13552 BioCyc:CJEJ195099:GJC0-464-MONOMER
Uniprot:Q5HW57
Length = 241
Score = 186 (70.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 56/157 (35%), Positives = 80/157 (50%)
Query: 53 YRWNPDSP-SKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGSCAM 110
+++NP S SKP +E L+E M V L I+ ++D L+F CR GICGSCAM
Sbjct: 10 FKYNPLSKISKPHFVTYE--LEETPFMTVFVCLTLIREKMDADLSFDFVCRAGICGSCAM 67
Query: 111 NIDGCNGLAC--LTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQY-KSIEPWLKRKN 167
I+G LAC LTK P G + P+P IKDL V+ ++ K +E W+ +
Sbjct: 68 MINGVPKLACKTLTKDYPDGVIE-LMPMPAFRHIKDLSVNTGEWFEDMCKRVESWVHNEK 126
Query: 168 PPPMPGKEI---PQSKKDRAKLDGMYECILC-ACCST 200
+ E P+ + +LD EC +C A C+T
Sbjct: 127 ETDISKLEERIEPEVADETFELDRCIECGICVASCAT 163
Score = 45 (20.9 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 187 DGMYECILCACCSTSCP 203
DG++ C+ C +CP
Sbjct: 203 DGVFGCMSLLACEDNCP 219
>TIGR_CMR|CHY_0064 [details] [associations]
symbol:CHY_0064 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245
RefSeq:YP_358936.1 ProteinModelPortal:Q3AFZ8 STRING:Q3AFZ8
GeneID:3727128 KEGG:chy:CHY_0064 PATRIC:21273325 OMA:GCCASEC
ProtClustDB:CLSK2772298 BioCyc:CHYD246194:GJCN-64-MONOMER
Uniprot:Q3AFZ8
Length = 317
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 56/160 (35%), Positives = 86/160 (53%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCA 109
F+I R++ + K ++E++ + G +L AL IK IDP+LTF SCR +CG+CA
Sbjct: 6 FKIRRFDGE---KSWVQEYQFPYQP-GKTILWALSYIKESIDPTLTFTASCRHAVCGACA 61
Query: 110 MNIDGCNGLAC---LTKISPSGSAST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWL- 163
+ ++G LAC L K+ T I PL + VI+DLVVD + ++PWL
Sbjct: 62 VRVNGQAVLACETLLDKMLDRWETDTLLIEPLQNFKVIRDLVVDWETKVERLARVKPWLI 121
Query: 164 KRKNPPPMPG-KEIPQSKKDRAKLDGMYECILCACCSTSC 202
R G ++ P+ K K++ +CILC CC++ C
Sbjct: 122 PRDEFSKETGCRQTPEEFK---KINKNSDCILCGCCASEC 158
>UNIPROTKB|O53669 [details] [associations]
symbol:Rv0247c "PROBABLE SUCCINATE DEHYDROGENASE
[IRON-SULFUR SUBUNIT] (SUCCINIC DEHYDROGENASE)" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
Pfam:PF00111 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0005886 GO:GO:0005618 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0016491
EMBL:BX842572 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
EMBL:CP003248 PIR:C70939 RefSeq:NP_214761.1 RefSeq:NP_334665.1
RefSeq:YP_006513571.1 HSSP:P17596 SMR:O53669
EnsemblBacteria:EBMYCT00000001424 EnsemblBacteria:EBMYCT00000069127
GeneID:13316234 GeneID:886677 GeneID:923168 KEGG:mtc:MT0261
KEGG:mtu:Rv0247c KEGG:mtv:RVBD_0247c PATRIC:18122287
TubercuList:Rv0247c HOGENOM:HOG000022233 OMA:YDPLVWL
ProtClustDB:PRK12386 Uniprot:O53669
Length = 248
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 52/170 (30%), Positives = 84/170 (49%)
Query: 55 WNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDG 114
W D S EL+EF + + E G +VLD +++++ P L R +C+ G CGSC+ I+G
Sbjct: 10 WRGDE-SCGELREFTVEVNE-GEVVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSAEING 67
Query: 115 CNGLACLTKISP--SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMP 172
L C+T++S T+TP+ VI+DLV D++ Y + + I + K P
Sbjct: 68 KPRLMCMTRMSTFDEDEIVTVTPMRTFPVIRDLVTDVSFNYQKAREIPSFAPPKELQP-- 125
Query: 173 GKEIPQSKKDRAKLDGMYECILCACCSTSCP---SYWWTSEAYLGPAALL 219
E ++ D A+ +CI C C C + +A+ GP L+
Sbjct: 126 -SEYRMAQVDVARSQEFRKCIECFLCQNVCHVVRDHEENKDAFAGPRFLM 174
>TIGR_CMR|CJE_0489 [details] [associations]
symbol:CJE_0489 "succinate dehydrogenase, iron-sulfur
protein subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 OMA:WSADSRD SUPFAM:SSF46548 TIGRFAMs:TIGR00384
KO:K00240 RefSeq:YP_178508.1 ProteinModelPortal:Q5HW27
STRING:Q5HW27 GeneID:3231250 KEGG:cjr:CJE0489 PATRIC:20042682
ProtClustDB:CLSK878790 BioCyc:CJEJ195099:GJC0-499-MONOMER
Uniprot:Q5HW27
Length = 321
Score = 204 (76.9 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 57/180 (31%), Positives = 90/180 (50%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKEC-GPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
K I R+N K E + ++I+ K+ G +L L+ IK D +L F SC+ ICG+
Sbjct: 2 KIIIDRFN--GKEKYE-QSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGA 58
Query: 108 CAMNIDGCNGLACLTKISP------SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEP 161
CA+ ++G + LAC TK+ + S+ I+PL + VI DL+VD + I P
Sbjct: 59 CAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIVDWEPSIENLRKIRP 118
Query: 162 WLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ KN K QS+++ ++ ++CILC C++ C S Y+ P HA
Sbjct: 119 AMVAKNEFSAE-KGCKQSQEEFDRISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHA 177
>TIGR_CMR|BA_4753 [details] [associations]
symbol:BA_4753 "succinate dehydrogenase, iron-sulfur
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006099
GO:GO:0051536 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 HSSP:P17596 RefSeq:NP_846959.1
RefSeq:YP_021401.1 RefSeq:YP_030659.1 ProteinModelPortal:Q81L78
DNASU:1083838 EnsemblBacteria:EBBACT00000012333
EnsemblBacteria:EBBACT00000014912 EnsemblBacteria:EBBACT00000024327
GeneID:1083838 GeneID:2815738 GeneID:2851658 KEGG:ban:BA_4753
KEGG:bar:GBAA_4753 KEGG:bat:BAS4412 HOGENOM:HOG000160588
OMA:EPMSTFP ProtClustDB:PRK08640
BioCyc:BANT260799:GJAJ-4469-MONOMER
BioCyc:BANT261594:GJ7F-4617-MONOMER Uniprot:Q81L78
Length = 253
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 46/173 (26%), Positives = 83/173 (47%)
Query: 58 DSPSKPEL-KEFEINLKECGPMVLDALIKIK-SEIDPS------LTFRRSCREGICGSCA 109
D P +EFEI + ++ AL++I+ + +D + + +C E +CG+C+
Sbjct: 14 DGPDAQAFDQEFEIPYRP-NMNIISALMEIRRNPVDSKGNQTTPIAWDMNCLEEVCGACS 72
Query: 110 MNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP 169
M I+G +C I + P+ V++DL VD + +N K ++ W+
Sbjct: 73 MVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFNALKRVKAWIPIDGTY 132
Query: 170 PM-PGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ PG +P+ K+ A + +C+ C C SCP+ S+ ++GPA L A
Sbjct: 133 DLGPGPRMPEKKRQWAY--ELSKCMTCGVCLESCPNVNSKSD-FIGPAPLSQA 182
>UNIPROTKB|Q74DY7 [details] [associations]
symbol:frdB "Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
KO:K00240 RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7
GeneID:2686801 KEGG:gsu:GSU1178 PATRIC:22025128
HOGENOM:HOG000160589 OMA:INVKFIA ProtClustDB:PRK07570
BioCyc:GSUL243231:GH27-1164-MONOMER Uniprot:Q74DY7
Length = 253
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 50/173 (28%), Positives = 71/173 (41%)
Query: 52 IYRWNPDSPSKPELKEFEI-NLKECGP--MVLDALIKIKSEI-----DPSLTFRRSCREG 103
++ W P P +FE+ K+ P L+ L + E+ DP + F CREG
Sbjct: 12 LHVWRQKGPKDPG--KFEVYEAKDVSPDQSFLEMLDDVNEELIKQGKDP-IAFDHDCREG 68
Query: 104 ICGSCAMNIDGC--NGLACLT------KISPSGSASTITPL-PHMF-VIKDLVVDMTNFY 153
ICG C+ I+G G+ T ++ +G A I P F +IKDLVVD
Sbjct: 69 ICGMCSQVINGIPHGGMDRTTVCQLHMRMFKNGDAIYIEPWRARAFPIIKDLVVDR-GAL 127
Query: 154 NQYKSIEPWLKRKNPPPMPGKE--IPQSKKDRAKLDGMYECILCACCSTSCPS 204
+ + G IP+ D A +D ECI C C CP+
Sbjct: 128 DTIIQAGGYTSAHTGGVADGNALLIPKDDADYA-MDAA-ECIGCGACVAGCPN 178
>TIGR_CMR|GSU_1178 [details] [associations]
symbol:GSU_1178 "fumarate reductase, iron-sulfur protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548 KO:K00240
RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7 GeneID:2686801
KEGG:gsu:GSU1178 PATRIC:22025128 HOGENOM:HOG000160589 OMA:INVKFIA
ProtClustDB:PRK07570 BioCyc:GSUL243231:GH27-1164-MONOMER
Uniprot:Q74DY7
Length = 253
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 50/173 (28%), Positives = 71/173 (41%)
Query: 52 IYRWNPDSPSKPELKEFEI-NLKECGP--MVLDALIKIKSEI-----DPSLTFRRSCREG 103
++ W P P +FE+ K+ P L+ L + E+ DP + F CREG
Sbjct: 12 LHVWRQKGPKDPG--KFEVYEAKDVSPDQSFLEMLDDVNEELIKQGKDP-IAFDHDCREG 68
Query: 104 ICGSCAMNIDGC--NGLACLT------KISPSGSASTITPL-PHMF-VIKDLVVDMTNFY 153
ICG C+ I+G G+ T ++ +G A I P F +IKDLVVD
Sbjct: 69 ICGMCSQVINGIPHGGMDRTTVCQLHMRMFKNGDAIYIEPWRARAFPIIKDLVVDR-GAL 127
Query: 154 NQYKSIEPWLKRKNPPPMPGKE--IPQSKKDRAKLDGMYECILCACCSTSCPS 204
+ + G IP+ D A +D ECI C C CP+
Sbjct: 128 DTIIQAGGYTSAHTGGVADGNALLIPKDDADYA-MDAA-ECIGCGACVAGCPN 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 220 0.00094 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 611 (65 KB)
Total size of DFA: 193 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.51u 0.09s 20.60t Elapsed: 00:00:01
Total cpu time: 20.52u 0.09s 20.61t Elapsed: 00:00:01
Start: Mon May 20 18:56:37 2013 End: Mon May 20 18:56:38 2013