BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026956
(230 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LB02|DHSB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1
SV=2
Length = 280
Score = 352 bits (902), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 1 MATGLIRRAISS-SAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDS 59
MA GLI R + + S+ ++ ARL+ AR+ ++ +EAQ K FQIYRWNPD+
Sbjct: 1 MAFGLIGRVVGTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDN 60
Query: 60 PSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLA 119
P KPEL++++I+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGLA
Sbjct: 61 PGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 120
Query: 120 CLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQS 179
CLTKI +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP +PGKEI QS
Sbjct: 121 CLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQS 180
Query: 180 KKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
KKDRAKLDGMYECILCACCSTSCPSYWW E+YLGPAALLHAN
Sbjct: 181 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 223
>sp|Q8LBZ7|DHSB1_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1
SV=2
Length = 279
Score = 347 bits (889), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/224 (73%), Positives = 188/224 (83%), Gaps = 2/224 (0%)
Query: 1 MATGLIRRAISSS-AAVAQPARLLTARFHASEAEAQ-KVEPKASANTDTKKFQIYRWNPD 58
MA+GLI R + + + +A ARL+ AR+ ++ AEA+ K ++ K FQIYRWNPD
Sbjct: 1 MASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPD 60
Query: 59 SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGL 118
+P KPEL+ ++I+LK+CGPMVLDALIKIK+E+DPSLTFRRSCREGICGSCAMNIDGCNGL
Sbjct: 61 NPGKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
Query: 119 ACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQ 178
ACLTKI S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK P +P KEI Q
Sbjct: 121 ACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180
Query: 179 SKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
SKKDRAKLDGMYECILCACCSTSCPSYWW E+YLGPAALLHAN
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN 224
>sp|P21914|DHSB_DROME Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2
SV=2
Length = 297
Score = 261 bits (668), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/191 (63%), Positives = 152/191 (79%), Gaps = 4/191 (2%)
Query: 35 QKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPS 93
Q+ +PK + KKF+IYRWNPD+ KP ++ +E++L+ECGPMVLDALIKIK+E+DP+
Sbjct: 34 QQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMDPT 93
Query: 94 LTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAS-TITPLPHMFVIKDLVVDMTNF 152
LTFRRSCREGICGSCAMNI G N LAC++KI + S S + PLPHM+V++DLV DM NF
Sbjct: 94 LTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNF 153
Query: 153 YNQYKSIEPWLKRKNPP-PMPGK-EIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSE 210
Y QY++I+PWL+RKN GK + QS +DR+KLDG+YECILCACCSTSCPSYWW +E
Sbjct: 154 YEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAE 213
Query: 211 AYLGPAALLHA 221
YLGPA L+ A
Sbjct: 214 KYLGPAVLMQA 224
>sp|Q70KF8|DHSB_UROFA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Uromyces fabae GN=SDH2 PE=3 SV=1
Length = 283
Score = 260 bits (665), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 145/184 (78%), Gaps = 4/184 (2%)
Query: 40 KASANTDTKKFQIYRWNPDSPSK-PELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRR 98
+ S+ K+F IYRWNPD PSK P L+ + I+LK+CGPMVLDALIKIK+E+DP+LTFRR
Sbjct: 44 QPSSAVPVKEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRR 103
Query: 99 SCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYK 157
SCREGICGSCAMNIDG N LACL +I+ SA I PLPHM++IKDLV DMT+FY QYK
Sbjct: 104 SCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYK 163
Query: 158 SIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAA 217
SIEP+LK NPP E QS +DR KLDGMYECILCACCSTSCPSYWW + YLGPA
Sbjct: 164 SIEPFLKNDNPPAQ--GEFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAV 221
Query: 218 LLHA 221
L+ A
Sbjct: 222 LMQA 225
>sp|O42772|DHSB_MYCGR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Mycosphaerella graminicola GN=SDH2 PE=3
SV=1
Length = 297
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 145/186 (77%), Gaps = 3/186 (1%)
Query: 38 EPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTF 96
EP+ A+ TK F IYRWNPD P+ KP ++ + ++L + GPM+LDALI+IK+E+DP+LTF
Sbjct: 54 EPQMDADAKTKTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTF 113
Query: 97 RRSCREGICGSCAMNIDGCNGLACLTKI-SPSGSASTITPLPHMFVIKDLVVDMTNFYNQ 155
RRSCREGICGSCAMNIDG N LACL +I + + + I PLPH +V+KDLV DMT FY Q
Sbjct: 114 RRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQ 173
Query: 156 YKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGP 215
YKSI+P+L+R PP GKE QS DR KLDG+YECILCACCSTSCPSYWW SE YLGP
Sbjct: 174 YKSIKPYLQRDTAPP-DGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGP 232
Query: 216 AALLHA 221
A LL +
Sbjct: 233 AVLLQS 238
>sp|P21911|DHSB_SCHPO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sdh2 PE=3 SV=3
Length = 275
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 149/201 (74%), Gaps = 6/201 (2%)
Query: 24 TARFHASEAE--AQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVL 80
AR A+EA A P+ S + K F+IYRWNP+ P KP+L+++ ++L +CGPMVL
Sbjct: 20 NARMMATEANISATSANPQ-SQGENLKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVL 78
Query: 81 DALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMF 140
DALIKIK+E DP+LTFRRSCREGICGSCAMNI+G N LAC+ I + I PLPH F
Sbjct: 79 DALIKIKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLPHCF 138
Query: 141 VIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCST 200
++KDLV D+T FY QYKSIEPWL+ N P KE QS+ DRAKLDG+YECILCACCST
Sbjct: 139 IVKDLVPDLTYFYKQYKSIEPWLQNDNIP--KDKEFYQSRADRAKLDGLYECILCACCST 196
Query: 201 SCPSYWWTSEAYLGPAALLHA 221
SCPSYWW SE YLGPA L+ A
Sbjct: 197 SCPSYWWNSEEYLGPAVLMQA 217
>sp|Q9YHT2|DHSB_CHICK Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1
Length = 290
Score = 256 bits (655), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 152/211 (72%), Gaps = 8/211 (3%)
Query: 19 PARLLTARFH------ASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPELKEFEIN 71
PAR L A A + + A+A + KKF IYRW+PD P KP ++ +E++
Sbjct: 15 PARFLRAGLRPVRGLEAVHGICRGAQTAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVD 74
Query: 72 LKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAS 131
L +CGPMVLDALIKIK+E+D +LTFRRSCREGICGSCAMNI G N LAC KI P S +
Sbjct: 75 LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKIDPDLSKT 134
Query: 132 T-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMY 190
T I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+Y
Sbjct: 135 TKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLY 194
Query: 191 ECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
ECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 195 ECILCACCSTSCPSYWWNGDKYLGPAVLMQA 225
>sp|Q9FJP9|DHSB3_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=2
SV=1
Length = 309
Score = 256 bits (655), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 10/193 (5%)
Query: 31 EAEAQKVEPKASANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSE 89
E E Q E K K+F+IYRWNPD P SKP L+ F ++L CGPMVLD L KIK+E
Sbjct: 57 EKEGQHKEVK-------KEFKIYRWNPDKPNSKPFLQSFFVDLSSCGPMVLDVLQKIKAE 109
Query: 90 IDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVD 148
D SL++RRSCREGICGSC+MNIDG N +ACL I+P+ S T ITPLPHM+VIKDLVVD
Sbjct: 110 DDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVD 169
Query: 149 MTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWT 208
+TNFY QYKS+EPWLK + PP G+E QS KDR KLDG+YECILCACC+TSCPSYWW
Sbjct: 170 LTNFYQQYKSMEPWLKTRK-PPKDGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWN 228
Query: 209 SEAYLGPAALLHA 221
E + GPAALL A
Sbjct: 229 PEEFPGPAALLQA 241
>sp|Q6FWS8|DHSB_CANGA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SDH2 PE=3
SV=1
Length = 253
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 142/176 (80%), Gaps = 3/176 (1%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K F+IYRWNPD P+ KP L+E++++L++CGPMVLDAL+KIK+E D +LTFRRSCREGICG
Sbjct: 21 KTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGICG 80
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LACL KI S +T I PLPHMF++KDLV D+T FY QYKSI+P+L+R
Sbjct: 81 SCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQR 140
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ P GKE+ QS DR KLDG+YECILCACCSTSCPSYWW E YLGPA L+ A
Sbjct: 141 TDYPA-DGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQA 195
>sp|A5PL98|DHSB_DANRE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Danio rerio GN=sdhb PE=2 SV=1
Length = 280
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPDS-PSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKFQIYRW+PD+ KP ++ +EI+L CGPMVLDALIKIK+E+D +LTFRRSCREGICG
Sbjct: 39 KKFQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGICG 98
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LACL KI + S T I PLPHM+V+KDLV DM+NFY QYKSIEP+LK+
Sbjct: 99 SCAMNINGGNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLKK 158
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 159 KDESQQGKQQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQA 214
>sp|Q3B8J8|DHSB_XENLA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Xenopus laevis GN=sdhb PE=2 SV=1
Length = 282
Score = 252 bits (644), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 152/215 (70%), Gaps = 2/215 (0%)
Query: 9 AISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSP-SKPELKE 67
A+ S + P L+ S P + A KKF IYRW+PD P KP ++
Sbjct: 3 AVVFSLRRSGPVLRLSGALQVSRGAQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQT 62
Query: 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPS 127
+E++L CGPMVLDALIKIK+E+DP+LTFRRSCREGICGSCAMNI+G N LAC +I +
Sbjct: 63 YEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTN 122
Query: 128 GS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKL 186
S S I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KL
Sbjct: 123 LSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDKSQQGKEQYLQSIEDRDKL 182
Query: 187 DGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
DG+YECILCACCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 183 DGLYECILCACCSTSCPSYWWNADKYLGPAVLMQA 217
>sp|Q75CI4|DHSB_ASHGO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SDH2 PE=3 SV=1
Length = 261
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 143/179 (79%), Gaps = 3/179 (1%)
Query: 45 TDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREG 103
T K F+IYRWNPD+P+ KP ++E++++L +CGPMVLDALIKIK+E DP+LTFRRSCREG
Sbjct: 26 TRYKSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRRSCREG 85
Query: 104 ICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 162
ICGSCAMNI G N LACL KI + + I PLPHM+V+KDLV D+TNFY QYKSI+P+
Sbjct: 86 ICGSCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPY 145
Query: 163 LKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
L+ K P G+E QS DR KLDG+YECILCACCST+CPSYWW +E YLGPA L+ A
Sbjct: 146 LQ-KASKPADGREHLQSIADRKKLDGLYECILCACCSTACPSYWWNNEQYLGPAVLMQA 203
>sp|P21801|DHSB_YEAST Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SDH2 PE=1 SV=1
Length = 266
Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 139/176 (78%), Gaps = 3/176 (1%)
Query: 48 KKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K F++YRWNPD PS KP L+ ++++L +CGPMVLDAL+KIK E D +LTFRRSCREGICG
Sbjct: 34 KTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICG 93
Query: 107 SCAMNIDGCNGLACLTKISPSGSAS-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LAC+ KI + S I PLPHMF++KDLV D+TNFY QYKSI+P+L+R
Sbjct: 94 SCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQR 153
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ P G E+ QS +DR KLDG+YECILCACCSTSCPSYWW E YLGPA L+ A
Sbjct: 154 SSFPK-DGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQA 208
>sp|B0BM36|DHSB_XENTR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Xenopus tropicalis GN=sdhb PE=2 SV=1
Length = 284
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 141/176 (80%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD P KP ++ +E++L ECG MVLDALIKIK+E+DP+LTFRRSCREGICG
Sbjct: 44 KKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGICG 103
Query: 107 SCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S S I PLPHM+V+KDLV D++NFY QYKSIEP+LK+
Sbjct: 104 SCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKK 163
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 164 KDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQA 219
>sp|A8WPF0|DHSB_CAEBR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Caenorhabditis briggsae GN=sdhb-1 PE=3
SV=2
Length = 282
Score = 247 bits (631), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Query: 38 EPKASANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTF 96
+PK + N K F+IYR+NP++P +KP +++F+++L +CG M+LDALIKIK+E+DP+LTF
Sbjct: 29 QPKKTGNR-IKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTF 87
Query: 97 RRSCREGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQ 155
RRSCREGICGSCAMNI G N LAC+ KI S ST I PLPHMFV+KDLV DM FY Q
Sbjct: 88 RRSCREGICGSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQ 147
Query: 156 YKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGP 215
Y SI+PW+++K P + K++ QS +R +LDG+YECILCACCSTSCPSYWW ++ YLGP
Sbjct: 148 YASIQPWIQKKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGP 207
Query: 216 AALLHA 221
A L+ A
Sbjct: 208 AVLMQA 213
>sp|Q3T189|DHSB_BOVIN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Bos taurus GN=SDHB PE=2 SV=1
Length = 280
Score = 246 bits (629), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 149/207 (71%), Gaps = 8/207 (3%)
Query: 23 LTARFHASEAEAQKVEPKASANTDT------KKFQIYRWNPD-SPSKPELKEFEINLKEC 75
L RF A+ +++ A T KKF IYRW+PD + KP ++ +EI+L C
Sbjct: 9 LRRRFPAAALGGARLQACRGAQTAAAAAPRIKKFAIYRWDPDKTGDKPHMQTYEIDLNNC 68
Query: 76 GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGS-ASTIT 134
GPMVLDALIKIK+EID +LTFRRSCREGICGSCAMNI+G N LAC +I + S S I
Sbjct: 69 GPMVLDALIKIKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIY 128
Query: 135 PLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECIL 194
PLPHM+VIKDLV D++NFY QYKSIEP+LK+K+ ++ QS +DR KLDG+YECIL
Sbjct: 129 PLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECIL 188
Query: 195 CACCSTSCPSYWWTSEAYLGPAALLHA 221
CACCSTSCPSYWW + YLGPA L+ A
Sbjct: 189 CACCSTSCPSYWWNGDKYLGPAVLMQA 215
>sp|P32420|DHSB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SDH2 PE=3 SV=1
Length = 295
Score = 246 bits (629), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 155/217 (71%), Gaps = 7/217 (3%)
Query: 6 IRRAISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPS-KPE 64
+R +++SS+ VA + AR ++ K K+F+IYRWNPD PS KP
Sbjct: 14 LRPSVASSSRVAAFSTTAAARLATPTSDNVGSSGKPQ---HLKQFKIYRWNPDKPSEKPR 70
Query: 65 LKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI 124
L+ + ++L + GPMVLDALIKIK+EIDP+LTFRRSCREGICGSCAMNIDG N LACL +I
Sbjct: 71 LQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRI 130
Query: 125 SPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRA 184
+ I PLPHM+++KDLV D+T FY QY+SIEP+LK N P G+ + QS ++R
Sbjct: 131 DKQND-TKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPFLKSNNTPS-EGEHL-QSPEERR 187
Query: 185 KLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+LDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 188 RLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQA 224
>sp|Q09545|DHSB_CAEEL Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Caenorhabditis elegans GN=sdhb-1 PE=2
SV=1
Length = 298
Score = 246 bits (629), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K F+IYR+NP++P +KP +++F+++L +CG M+LDALIKIK+E+DP+LTFRRSCREGICG
Sbjct: 54 KTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICG 113
Query: 107 SCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI G N LAC+ KI S ST I PLPHMFV+KDLV DM FY QY SI+PW+++
Sbjct: 114 SCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQK 173
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K P + K++ QS +R +LDG+YECILCACCSTSCPSYWW ++ YLGPA L+ A
Sbjct: 174 KTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQA 229
>sp|Q9CQA3|DHSB_MOUSE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Mus musculus GN=Sdhb PE=1 SV=1
Length = 282
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPD-SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD + KP ++ +E++L +CGPMVLDALIKIK+E+D +LTFRRSCREGICG
Sbjct: 42 KKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 101
Query: 107 SCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I S S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 102 SCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 162 KDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 217
>sp|P21913|DHSB_RAT Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Rattus norvegicus GN=Sdhb PE=2 SV=2
Length = 282
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPD-SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
K F IYRW+PD + KP ++ ++++L +CGPMVLDALIKIK+EID +LTFRRSCREGICG
Sbjct: 42 KTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 101
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I G S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 102 SCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 161
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 162 KDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 217
>sp|P80480|DHSB_RECAM Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Reclinomonas americana GN=SDH2 PE=3 SV=1
Length = 239
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCA 109
F++YRWNPD KP + + ++L CGPMVLDALIKIK+E D +LTFRRSCREG+CGSCA
Sbjct: 11 FKVYRWNPDKKEKPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSCA 70
Query: 110 MNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP 169
MNIDG N LAC+ I + I PLPHM +IKDLV D++NFY QYKSIEPW+ K
Sbjct: 71 MNIDGTNTLACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWM--KTTE 128
Query: 170 PMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
KE QS+ DR KLDG+YEC+LCACCSTSCPSYWW S+ YLGPA LL A
Sbjct: 129 KKLDKEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQA 180
>sp|P21912|DHSB_HUMAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Homo sapiens GN=SDHB PE=1 SV=3
Length = 280
Score = 244 bits (623), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPD-SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD + KP ++ +E++L +CGPMVLDALIKIK+E+D +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>sp|Q68XS0|DHSB_RICTY Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sdhB PE=3 SV=1
Length = 261
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 144/203 (70%), Gaps = 9/203 (4%)
Query: 19 PARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPM 78
P+ + + +A+ + ++P+ K Q+YR++PD P + FEI+L + GPM
Sbjct: 7 PSNSVVKKGRVHKAQQEMLKPR--------KVQVYRYDPDLNKNPTIDSFEIDLSKTGPM 58
Query: 79 VLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPH 138
VLDALIKIK+EID +LTFRRSCREGICGSCAMNIDG N LAC+ I I PLPH
Sbjct: 59 VLDALIKIKNEIDSTLTFRRSCREGICGSCAMNIDGTNTLACIKPIEDISGDIKIYPLPH 118
Query: 139 MFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACC 198
M V+KDLV DM++FY QY+SIEPWLK NP P + + QS +DR KLDG+YECILCACC
Sbjct: 119 MKVVKDLVPDMSHFYTQYESIEPWLKNDNPAPSNSERL-QSIQDREKLDGLYECILCACC 177
Query: 199 STSCPSYWWTSEAYLGPAALLHA 221
STSCPSYWW S+ YLGPA LL A
Sbjct: 178 STSCPSYWWNSDKYLGPAILLQA 200
>sp|Q007T0|DHSB_PIG Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Sus scrofa GN=SDHB PE=1 SV=1
Length = 280
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Query: 48 KKFQIYRWNPD-SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICG 106
KKF IYRW+PD + KP ++ +EI+L CGPMVLDALIKIK+EID +LTFRRSCREGICG
Sbjct: 40 KKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGICG 99
Query: 107 SCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKR 165
SCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++NFY QYKSIEP+LK+
Sbjct: 100 SCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKK 159
Query: 166 KNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A
Sbjct: 160 KDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQA 215
>sp|Q55CC2|DHSB_DICDI Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Dictyostelium discoideum GN=sdhB PE=3
SV=1
Length = 287
Score = 240 bits (612), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 160/229 (69%), Gaps = 9/229 (3%)
Query: 1 MATGLIRRA--ISSSAAVAQPARLLTARFHASEAEAQKVEPKASANTDTKKFQIYRWNPD 58
M + +++RA ++ S + TA+ AS + K++ A FQ+YR+N +
Sbjct: 1 MISNVLKRASVLARSNGIQSAFYTTTAKTEASSSPQMKIKT-AEKKDHFVNFQVYRYNEE 59
Query: 59 SPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGL 118
+ +KP ++ + INLK+CGPMVLDAL+ IK+ IDP+L+FRRSCREGICGSCAMN++G N L
Sbjct: 60 TTAKPYIQTYNINLKDCGPMVLDALLLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTL 119
Query: 119 ACLTKISP--SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK-RKNPPPMPGKE 175
AC KI+ SG + PLPHM V++DL+ D+++FY Q+KSI+PWL+ + P GKE
Sbjct: 120 ACTKKITDCLSGDTVKVYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAVDVPRYNGKE 179
Query: 176 IPQSKKDRAKLDGMYECILCACCSTSCPSYWWT---SEAYLGPAALLHA 221
I QSK++R KLDG+YECILCACCSTSCPSYWW+ YLGPA LL A
Sbjct: 180 ILQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQA 228
>sp|Q59662|DHSB_PARDE Succinate dehydrogenase iron-sulfur subunit OS=Paracoccus
denitrificans GN=sdhB PE=3 SV=1
Length = 259
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 30 SEAEAQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSE 89
S K PK T+ ++F IYRW+PD+ P + + +++ +CGPMVLDALIKIK+E
Sbjct: 10 SRMRVGKTWPKPEGATNVRRFNIYRWDPDTGENPRIDTYFVDMDKCGPMVLDALIKIKNE 69
Query: 90 IDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDM 149
IDP+LTFRRSCREGICGSCAMNIDG N LAC+ + I PLPHM V+KDLV D+
Sbjct: 70 IDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGMDEIKGDVNIYPLPHMPVVKDLVPDL 129
Query: 150 TNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTS 209
T+FY Q+ S++P+L + P P KE QS +DR KLDG+YEC++CA CST+CPSYWW
Sbjct: 130 THFYAQHASVQPYLITET--PTPDKEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNG 187
Query: 210 EAYLGPAALLHA 221
+ YLGPAALLHA
Sbjct: 188 DRYLGPAALLHA 199
>sp|Q1RGP3|DHSB_RICBR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia bellii
(strain RML369-C) GN=sdhB PE=3 SV=1
Length = 261
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
Query: 38 EPKASAN-TDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTF 96
E KA + ++ +K +IYR++PD P + FEI+L + GPMVLDALIKIK+EID ++TF
Sbjct: 17 EHKAKGDVSNLRKIKIYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTVTF 76
Query: 97 RRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQY 156
RRSCREGICGSCAMNIDG N LAC+ I I PLPHM V+KDLV DM++FY QY
Sbjct: 77 RRSCREGICGSCAMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQY 136
Query: 157 KSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPA 216
+SIEPWLK +P P + + QS KDR KLDG+YECILCACCSTSCPSYWW + YLGPA
Sbjct: 137 ESIEPWLKTDSPAPSNAERL-QSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPA 195
Query: 217 ALLHA 221
LL A
Sbjct: 196 ILLQA 200
>sp|Q9ZEA1|DHSB_RICPR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia
prowazekii (strain Madrid E) GN=sdhB PE=3 SV=1
Length = 261
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+K ++YR++PD P + FEI+L + GPMVLDALIKIK+EID +LTFRRSCREGICGS
Sbjct: 28 RKVKVYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGS 87
Query: 108 CAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
CAMNIDG N LAC+ I I PLPHM V+KDLV DM++FY QY+SIEPWLK +
Sbjct: 88 CAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKNDS 147
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P + + QS KDR KLDG+YECILCACCSTSCPSYWW + YLGPA LL A
Sbjct: 148 PAPSNSERL-QSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
>sp|Q92JJ8|DHSB_RICCN Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sdhB PE=3 SV=1
Length = 261
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+K +IYR++PD P + FEI+L + GPM+LDALIKIK+EID +LTFRRSCREGICGS
Sbjct: 28 RKIKIYRYDPDLDKNPTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICGS 87
Query: 108 CAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
CAMNIDG N LAC+ I I PLPHM V+KDLV DM++FY QY+SIEPWLK +
Sbjct: 88 CAMNIDGTNTLACIKPIEDISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDS 147
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P + + QS KDR KLDG+YECILCACCSTSCPSYWW + YLGPA LL A
Sbjct: 148 PTPSNSERL-QSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
>sp|Q4UN71|DHSB_RICFE Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sdhB PE=3 SV=1
Length = 261
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 48 KKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGS 107
+K +IYR++PD P + FEI+L + GPMVLDALIKIK+EID +LTFRRSCREGICGS
Sbjct: 28 RKVKIYRYDPDLDENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICGS 87
Query: 108 CAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 167
C+MNIDG N LAC+ I I PLPHM V+KDLV DM++FY QY+SIEPWLK +
Sbjct: 88 CSMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDS 147
Query: 168 PPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P + + QS K R KLDG+YECILCACCSTSCPSYWW + YLGPA LL A
Sbjct: 148 PTPSNSERL-QSIKGREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQA 200
>sp|P48933|DHSB_CYACA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Cyanidium caldarium GN=SDH2 PE=3 SV=1
Length = 262
Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 45 TDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGI 104
+D K +I+RW+ P + ++LK CGP+VLDALIKIK+E D +++FRRSCREGI
Sbjct: 18 SDLKLIKIFRWDSSEKKDPWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGI 77
Query: 105 CGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 164
CGSCA+NI+G N LACL K++ + + PLPH+FV+KDLVVD+TNFY QY+ I+PWL+
Sbjct: 78 CGSCAININGTNSLACLQKLNIKNNIIYVYPLPHIFVLKDLVVDLTNFYAQYRLIQPWLQ 137
Query: 165 RKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
+ KEI QSK+DR LDG+YECILCACCS SCPSYWW + YLGPA LL A
Sbjct: 138 -SSLNIKSKKEIYQSKQDRLYLDGLYECILCACCSASCPSYWWNHDKYLGPAVLLQA 193
>sp|P80477|DHSB_PORPU Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Porphyra purpurea GN=SDH2 PE=3 SV=1
Length = 239
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
Query: 44 NTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREG 103
N + K +IYRW P + ++ + I+ CGPM+LDALIKIK E D SL FRRSCREG
Sbjct: 7 NLNLKFIRIYRWTPSNQAEAKFSVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCREG 66
Query: 104 ICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWL 163
ICGSC+MNIDG N LACL I + + TI PLPHM++IKDLV D++NF++QYK I+PWL
Sbjct: 67 ICGSCSMNIDGINTLACLKPIKTNANIITIYPLPHMYIIKDLVPDLSNFFSQYKYIKPWL 126
Query: 164 KRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P E QS+KDR++L+G+YECILCACCS SCPSYWW + YLGPA LL A
Sbjct: 127 INNVP---KKSEYLQSEKDRSELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQA 181
>sp|P48932|DHSB_CHOCR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Chondrus crispus GN=SDH2 PE=3 SV=1
Length = 250
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 130/187 (69%), Gaps = 2/187 (1%)
Query: 35 QKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSL 94
QK+ +++ K +IYRWNP+ P F I+ CGPM+LDALI+IK+ D SL
Sbjct: 8 QKIITIDNSSPYQKFIRIYRWNPNLNLNPWFSIFPISTNNCGPMILDALIQIKNIQDSSL 67
Query: 95 TFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYN 154
TFRRSCREGICGSC+MNIDG N LACL ++ + TI PLPH ++IKDLV D++NFY
Sbjct: 68 TFRRSCREGICGSCSMNIDGTNSLACLRSLNTKSNFITIYPLPHTYIIKDLVPDLSNFYA 127
Query: 155 QYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLG 214
QYK I+PWL N KE QSK DR +LDG+YECILCACCS SCPSYWW + YLG
Sbjct: 128 QYKLIKPWL--INKIGFSLKENLQSKIDRLELDGLYECILCACCSASCPSYWWNQDKYLG 185
Query: 215 PAALLHA 221
PA LL A
Sbjct: 186 PAILLQA 192
>sp|Q8ZQU2|DHSB_SALTY Succinate dehydrogenase iron-sulfur subunit OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=sdhB PE=3 SV=2
Length = 238
Score = 187 bits (476), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 6/177 (3%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGS 107
+F IYR+NPD + P ++++ + +E M +LDALI++K E DPSL+FRRSCREG+CGS
Sbjct: 4 EFSIYRYNPDVDNAPRMQDYTLEGEEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62
Query: 108 CAMNIDGCNGLACLTKISP---SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 164
+N++G NGLAC+T IS G I PLP + VI+DLVVDM FY QY+ I+P+L
Sbjct: 63 DGLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLL 122
Query: 165 RKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P +E Q + R KLDG+YECILCACCSTSCPS+WW + ++GPA LL A
Sbjct: 123 NNGQNP-PAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAA 178
>sp|P07014|DHSB_ECOLI Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli
(strain K12) GN=sdhB PE=1 SV=1
Length = 238
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 122/177 (68%), Gaps = 6/177 (3%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGS 107
+F IYR+NPD P ++++ + E M +LDALI++K E DPSL+FRRSCREG+CGS
Sbjct: 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCGS 62
Query: 108 CAMNIDGCNGLACLTKISP---SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 164
+N++G NGLAC+T IS G I PLP + VI+DLVVDM FY QY+ I+P+L
Sbjct: 63 DGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLL 122
Query: 165 RKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHA 221
P P +E Q + R KLDG+YECILCACCSTSCPS+WW + ++GPA LL A
Sbjct: 123 NNGQNP-PAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAA 178
>sp|P51053|DHSB_COXBU Succinate dehydrogenase iron-sulfur subunit OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sdhB PE=3 SV=1
Length = 235
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 117/171 (68%), Gaps = 4/171 (2%)
Query: 50 FQIYRWNPDSPSKPELKEFEINLKEC-GPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
F I R+NP++ KP +++FE+++ G M+L+AL ++ E P + RRSC EG+CGS
Sbjct: 3 FSIMRFNPETDKKPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCGSD 61
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
MNI+G N LAC+T++ + PLP +I+DL+VDM FY QYK ++P+L N
Sbjct: 62 GMNINGKNALACVTQLKDLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYL--LND 119
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALL 219
P KE QS ++RAKLDG+YECILCACCS+SCPSYWW + ++GPA LL
Sbjct: 120 QEAPQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLL 170
>sp|Q10761|FRDB_MYCTU Fumarate reductase iron-sulfur subunit OS=Mycobacterium
tuberculosis GN=frdB PE=3 SV=1
Length = 247
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 46 DTKKFQIYRWNPDSPSKPELKEFEINL-KECGPMVLDALIKIKSEIDPSLTFRRSCREGI 104
D ++ R+ P+ S P + +E+ L +E VLD L IK +D +L+FR SCR GI
Sbjct: 3 DRIVMEVSRYRPEIESAPTFQAYEVPLTREWA--VLDGLTYIKDHLDGTLSFRWSCRMGI 60
Query: 105 CGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWL 163
CGS M I+G LAC T ++ + P+ + VI+DLVVD+++F + S++PWL
Sbjct: 61 CGSSGMTINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWL 120
Query: 164 KRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANS 223
R + PP+ E Q+ + CI C C ++CP Y + +LGPAA+
Sbjct: 121 VRHDEPPVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDPD-FLGPAAIALGQR 179
Query: 224 IGLSN 228
L +
Sbjct: 180 YNLDS 184
>sp|P44893|FRDB_HAEIN Fumarate reductase iron-sulfur subunit OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=frdB PE=3
SV=1
Length = 256
Score = 107 bits (267), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 12/196 (6%)
Query: 43 ANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCRE 102
AN+ ++ R+NP+ +P L +++ +LDAL IK +++PSL++R SCR
Sbjct: 2 ANSPVMNVEVLRYNPEIDQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRM 60
Query: 103 GICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPW 162
ICGSC M ++ LAC T + I PL + + +DLVVD+++F ++I+P+
Sbjct: 61 AICGSCGMMVNNKPKLACKTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPY 120
Query: 163 LKRKNPPPMPGK-------EIPQSKKDRAKLDGMYE---CILCACCSTSCPSYWWTSEAY 212
+ P + GK ++ ++K+ A+L+ + CI C C +CP + E +
Sbjct: 121 IIGNEAPALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNPE-F 179
Query: 213 LGPAALLHANSIGLSN 228
LGPAA+ A+ L N
Sbjct: 180 LGPAAITMAHRYNLDN 195
>sp|P20921|FRDB_PROVU Fumarate reductase iron-sulfur subunit OS=Proteus vulgaris GN=frdB
PE=3 SV=2
Length = 245
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP++ P +++ E +LDAL IK + P L++R SCR ICGSC
Sbjct: 9 KMEVMRYNPETDDAPHFVTYDVPYDE-QTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 67
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWL--KRK 166
M ++ LAC T + + I L + V +DLVVDMT+F ++I+P++ +
Sbjct: 68 GMMVNRVPKLACKTFMRDYPNGVRIEALGNFPVERDLVVDMTHFIESLEAIKPYILGNDR 127
Query: 167 NPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAAL 218
P P K+ P + G CI C C +CP + E ++GPAA+
Sbjct: 128 KPSEGPNKQTPAQMAKYHQFSG---CINCGLCYAACPQFGLNPE-FIGPAAI 175
>sp|P0AC50|FRDB_SHIFL Fumarate reductase iron-sulfur subunit OS=Shigella flexneri GN=frdB
PE=3 SV=2
Length = 244
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP+ + P +E+ + +LDAL IK + P L++R SCR ICGSC
Sbjct: 8 KIEVVRYNPEVDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
M ++ LAC T + + L + + +DLVVDMT+F ++I+P++ +
Sbjct: 67 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 126
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
G I Q+ AK CI C C +CP + E ++GPAA+ A+
Sbjct: 127 TADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAH 178
>sp|P0AC47|FRDB_ECOLI Fumarate reductase iron-sulfur subunit OS=Escherichia coli (strain
K12) GN=frdB PE=1 SV=2
Length = 244
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP+ + P +E+ + +LDAL IK + P L++R SCR ICGSC
Sbjct: 8 KIEVVRYNPEVDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
M ++ LAC T + + L + + +DLVVDMT+F ++I+P++ +
Sbjct: 67 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 126
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
G I Q+ AK CI C C +CP + E ++GPAA+ A+
Sbjct: 127 TADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAH 178
>sp|P0AC48|FRDB_ECOL6 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=frdB PE=3 SV=2
Length = 244
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP+ + P +E+ + +LDAL IK + P L++R SCR ICGSC
Sbjct: 8 KIEVVRYNPEVDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
M ++ LAC T + + L + + +DLVVDMT+F ++I+P++ +
Sbjct: 67 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 126
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
G I Q+ AK CI C C +CP + E ++GPAA+ A+
Sbjct: 127 TADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAH 178
>sp|P0AC49|FRDB_ECO57 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O157:H7
GN=frdB PE=3 SV=2
Length = 244
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 49 KFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSC 108
K ++ R+NP+ + P +E+ + +LDAL IK + P L++R SCR ICGSC
Sbjct: 8 KIEVVRYNPEVDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSC 66
Query: 109 AMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNP 168
M ++ LAC T + + L + + +DLVVDMT+F ++I+P++ +
Sbjct: 67 GMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSR 126
Query: 169 PPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAN 222
G I Q+ AK CI C C +CP + E ++GPAA+ A+
Sbjct: 127 TADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAH 178
>sp|O06914|FRDB_HELPY Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=frdB PE=3 SV=2
Length = 245
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 42 SANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVL-DALIKIKSEIDPSLTFRRS 99
S N T ++ +++P S SKP KE++ LKE M L AL I+ DP L+F
Sbjct: 2 SDNERTIVVRVLKFDPQSAVSKPHFKEYQ--LKETPSMTLFIALNLIREHQDPDLSFDFV 59
Query: 100 CREGICGSCAMNIDGCNGLACLTKISPSGSAS-TITPLPHMFVIKDLVVDMTN-FYNQYK 157
CR GICGSCAM ++G LAC T S S T+ P+P +IKDL V+ + F + K
Sbjct: 60 CRAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTK 119
Query: 158 SIEPWLKRKNPPPM--PGKEI-PQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLG 214
+E W K + P K + P ++ +LD CI C CC SC + ++G
Sbjct: 120 RVESWAHSKEEVDITRPEKRVEPDEAQEVFELD---RCIECGCCIASCGTKLMRPN-FIG 175
Query: 215 PAALLHA 221
A + A
Sbjct: 176 AAGMNRA 182
>sp|P17596|FRDB_WOLSU Fumarate reductase iron-sulfur subunit OS=Wolinella succinogenes
(strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 /
FDC 602W) GN=frdB PE=1 SV=1
Length = 239
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 51 QIYRWNPDSP-SKPELKEFEINLKECGPM-VLDALIKIKSEIDPSLTFRRSCREGICGSC 108
++++++P S SKP +E++I +E M + L I+ DP L F CR GICGSC
Sbjct: 8 RVFKYDPQSAVSKPHFQEYKI--EEAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSC 65
Query: 109 AMNIDGCNGLAC--LTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQY-KSIEPWL-- 163
M I+G LAC LTK G T+ PLP +IKDL VD N++N + +E W+
Sbjct: 66 GMMINGRPSLACRTLTKDFEDG-VITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHA 124
Query: 164 -KRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAAL 218
K + + + P+ ++ +LD CI C CC +C + E ++G A L
Sbjct: 125 QKEHDISKLEERIEPEVAQEVFELD---RCIECGCCIAACGTK-IMREDFVGAAGL 176
>sp|Q9ZMP1|FRDB_HELPJ Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori
(strain J99) GN=frdB PE=3 SV=1
Length = 245
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 42 SANTDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVL-DALIKIKSEIDPSLTFRRS 99
S N T ++ +++P S +KP KE++ LKE M L AL I+ DP L+F
Sbjct: 2 SDNERTIVVRVLKFDPQSAVNKPHFKEYQ--LKETPSMTLFIALNLIREHQDPDLSFDFV 59
Query: 100 CREGICGSCAMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTN-FYNQYK 157
CR GICGSCAM ++G LAC T S T+ P+P +IKDL V+ + F + K
Sbjct: 60 CRAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFSDMTK 119
Query: 158 SIEPWLKRKNPPPM--PGKEI-PQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLG 214
+E W K + P K + P ++ +LD CI C CC SC + ++G
Sbjct: 120 RVESWAHSKEEVDITKPEKRVEPDEAQEVFELD---RCIECGCCIASCGTKLMRPN-FIG 175
Query: 215 PAALLHA 221
A + A
Sbjct: 176 AAGMNRA 182
>sp|Q57557|Y092_METJA Uncharacterized iron-sulfur protein MJ0092 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0092 PE=3 SV=1
Length = 489
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 79 VLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPH 138
VL+AL I + ++ FR SCR CGSCA+ I+G LAC TK+ I PL
Sbjct: 27 VLEALEYINKHYEANILFRASCRNAQCGSCAVTINGEPRLACETKVE---DGMIIEPLRG 83
Query: 139 MFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACC 198
VI+DL+VD +Y + I+ +L RKN P IP+ ++ +L G CI C C
Sbjct: 84 FKVIRDLIVDREPYYKKLLGIKNYLIRKNYPEELEILIPKYVEENKELRG---CIDCLSC 140
Query: 199 STSCPSYWWTSEAYLGPAAL 218
+ CP+ + Y GP +
Sbjct: 141 LSVCPAREVSD--YPGPTFM 158
>sp|Q6LYC4|Y1067_METMP Uncharacterized iron-sulfur protein MMP1067 OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1067 PE=3 SV=1
Length = 494
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 65 LKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI 124
K+FE+ + G +LDAL I ++ FR SC+ G CGSCA+ I+ + LAC TK+
Sbjct: 14 FKKFEVPV---GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKV 70
Query: 125 SPSGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEI------PQ 178
+ I PL VI DLVVD +Y + ++ ++++KN + KE+ P
Sbjct: 71 EDN---MIIEPLEGFDVISDLVVDREPYYKKIGTLRNYIQKKN-EKISEKELDGLKLYPD 126
Query: 179 SKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAAL 218
KD K+ G CI C C CP+ +++ Y GP +
Sbjct: 127 DLKDVKKIRG---CIDCLSCIAMCPARKYSN--YPGPTLM 161
>sp|P08066|DHSB_BACSU Succinate dehydrogenase iron-sulfur subunit OS=Bacillus subtilis
(strain 168) GN=sdhB PE=3 SV=3
Length = 253
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 47 TKKFQIYRWNPDSPSKPELKEFEI----NLKECGPMVLDALIKI-------KSEIDPSLT 95
T +F I R + + S P +EFEI NL V+ AL++I K E +T
Sbjct: 6 TIRFIITRQD-TADSTPYDEEFEIPYRPNLN-----VISALMEIRRNPVNVKGEKTTPVT 59
Query: 96 FRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNFYNQ 155
+ +C E +CG+C+M I+G +C I + P+ V++DL VD + ++
Sbjct: 60 WDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFDS 119
Query: 156 YKSIEPWLKRKNPPPM-PGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLG 214
K ++ W+ + PG +P+ ++ A + +C+ C C +CP+ S+ ++G
Sbjct: 120 LKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY--ELSKCMTCGVCLEACPNVNSKSK-FMG 176
Query: 215 PA-----ALLHANSIGLSN 228
PA L +A+ G N
Sbjct: 177 PAPMSQVRLFNAHPTGAMN 195
>sp|Q46509|MOP_DESGI Aldehyde oxidoreductase OS=Desulfovibrio gigas GN=mop PE=1 SV=1
Length = 907
Score = 32.0 bits (71), Expect = 4.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 100 CREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136
C +G CG+C++ +DG AC+TK+ + IT +
Sbjct: 40 CEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTI 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,690,347
Number of Sequences: 539616
Number of extensions: 3413570
Number of successful extensions: 9806
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 9660
Number of HSP's gapped (non-prelim): 74
length of query: 230
length of database: 191,569,459
effective HSP length: 114
effective length of query: 116
effective length of database: 130,053,235
effective search space: 15086175260
effective search space used: 15086175260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)