Query 026956
Match_columns 230
No_of_seqs 170 out of 1884
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 04:02:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vr8_B Iron-sulfur subunit of 100.0 3E-57 1E-61 407.6 17.7 198 31-228 19-218 (282)
2 2h88_B Succinate dehydrogenase 100.0 4E-50 1.4E-54 352.5 15.0 187 42-228 6-194 (252)
3 2bs2_B Quinol-fumarate reducta 100.0 1.4E-48 4.6E-53 339.3 16.6 181 45-228 2-186 (241)
4 2wdq_B Succinate dehydrogenase 100.0 1.5E-44 5.2E-49 312.9 15.7 179 47-227 2-184 (238)
5 1kf6_B Fumarate reductase iron 100.0 9.8E-44 3.3E-48 308.7 14.7 177 47-227 5-182 (243)
6 3kwl_A Uncharacterized protein 100.0 3.3E-39 1.1E-43 309.8 11.7 151 39-228 16-173 (514)
7 1rm6_C 4-hydroxybenzoyl-COA re 99.8 2.2E-21 7.5E-26 161.4 7.8 105 66-228 12-118 (161)
8 1t3q_A Quinoline 2-oxidoreduct 99.8 4.5E-19 1.6E-23 148.0 9.7 70 66-140 19-90 (168)
9 1ffv_A CUTS, iron-sulfur prote 99.6 1E-16 3.5E-21 133.8 6.1 69 66-139 13-83 (163)
10 1n62_A Carbon monoxide dehydro 99.6 3.2E-16 1.1E-20 131.2 6.3 68 66-138 13-82 (166)
11 3hrd_D Nicotinate dehydrogenas 99.6 4E-16 1.4E-20 130.0 5.6 81 66-154 13-95 (160)
12 3nvw_A Xanthine dehydrogenase/ 99.5 8.5E-15 2.9E-19 122.5 1.2 65 69-138 16-92 (164)
13 2w3s_A Xanthine dehydrogenase; 99.4 2.2E-14 7.5E-19 136.3 1.9 67 66-138 10-83 (462)
14 1vlb_A Aldehyde oxidoreductase 99.4 1.3E-13 4.3E-18 140.2 5.6 81 66-154 11-94 (907)
15 1dgj_A Aldehyde oxidoreductase 99.4 2.9E-13 9.8E-18 137.5 5.0 80 67-154 12-94 (907)
16 3c8y_A Iron hydrogenase 1; dit 99.1 6.6E-11 2.2E-15 114.6 6.0 65 70-136 11-78 (574)
17 3i9v_3 NADH-quinone oxidoreduc 99.0 4.4E-11 1.5E-15 119.4 0.2 62 67-135 10-95 (783)
18 3unc_A Xanthine dehydrogenase/ 98.9 2.6E-10 9E-15 119.9 1.9 68 66-138 13-93 (1332)
19 1frr_A Ferredoxin I; electron 98.8 1.2E-08 4.1E-13 76.0 6.6 58 68-135 13-88 (95)
20 1frd_A Heterocyst [2Fe-2S] fer 98.7 1.7E-08 5.7E-13 75.9 6.8 57 69-135 17-91 (98)
21 1jq4_A Methane monooxygenase c 98.7 2.6E-08 8.9E-13 74.9 7.3 57 68-134 17-93 (98)
22 1awd_A Ferredoxin; electron tr 98.7 2.1E-08 7.2E-13 75.0 6.6 58 68-135 12-87 (94)
23 1a70_A Ferredoxin; iron-sulfur 98.7 2.2E-08 7.6E-13 75.4 6.6 58 68-135 14-89 (97)
24 1iue_A Ferredoxin; electron tr 98.7 2.5E-08 8.6E-13 75.2 6.6 58 68-135 14-89 (98)
25 1czp_A Ferredoxin I; [2Fe-2S] 98.6 5.3E-08 1.8E-12 73.3 6.8 58 68-135 16-91 (98)
26 1wri_A Ferredoxin II, ferredox 98.5 1.3E-07 4.5E-12 70.6 6.5 56 68-134 13-86 (93)
27 3zyv_A AOH1; oxidoreductase, m 98.4 1.2E-07 4.1E-12 99.8 5.1 68 66-138 17-97 (1335)
28 1l5p_A Ferredoxin; [2Fe-2S] cl 98.4 5E-07 1.7E-11 67.5 5.4 55 66-126 10-84 (93)
29 2wlb_A ETP1-FD, electron trans 98.3 8E-07 2.7E-11 67.2 5.5 60 68-134 16-101 (103)
30 1doi_A 2Fe-2S ferredoxin; halo 98.2 1.8E-06 6.3E-11 68.7 6.3 57 69-134 39-114 (128)
31 1krh_A Benzoate 1,2-dioxygenas 98.2 2E-06 6.8E-11 76.5 6.2 52 68-126 16-89 (338)
32 3ah7_A [2Fe-2S]ferredoxin; [2F 98.1 5.2E-06 1.8E-10 63.8 6.4 57 69-134 18-99 (113)
33 2bt6_A Adrenodoxin 1; rutheniu 98.1 6.3E-06 2.1E-10 62.8 6.7 60 68-134 19-106 (108)
34 1i7h_A Ferredoxin; 2Fe-2S,elec 98.1 4.6E-06 1.6E-10 64.0 5.6 57 69-134 18-99 (111)
35 1xlq_A Putidaredoxin, PDX; [2F 98.0 7.8E-06 2.7E-10 62.0 5.7 60 68-134 13-100 (106)
36 2pia_A Phthalate dioxygenase r 98.0 1.2E-05 4.1E-10 71.4 7.3 40 70-116 249-289 (321)
37 3lxf_A Ferredoxin; iron, iron- 98.0 1E-05 3.5E-10 61.8 5.8 41 67-113 12-53 (104)
38 1b9r_A Protein (terpredoxin); 98.0 5.6E-06 1.9E-10 62.7 4.2 60 68-134 13-100 (105)
39 2y5c_A Adrenodoxin-like protei 98.0 8.8E-06 3E-10 62.2 5.3 60 68-134 18-103 (109)
40 1uwm_A Ferredoxin VI, FDVI; el 97.9 1.1E-05 3.6E-10 61.3 5.3 60 68-134 13-100 (106)
41 3hui_A Ferredoxin; cytochrome 97.8 2.4E-05 8.3E-10 62.1 5.3 61 68-134 34-120 (126)
42 3n9z_C Adrenodoxin; cytochrome 97.3 5.2E-05 1.8E-09 59.9 1.3 39 68-113 18-59 (123)
43 3zyy_X Iron-sulfur cluster bin 97.1 0.00052 1.8E-08 67.6 6.2 57 70-136 15-90 (631)
44 1y56_A Hypothetical protein PH 94.8 0.059 2E-06 50.2 7.2 56 66-127 23-82 (493)
45 3i9v_9 NADH-quinone oxidoreduc 90.7 0.02 7E-07 45.8 -2.1 17 189-205 50-66 (182)
46 3cf4_A Acetyl-COA decarboxylas 88.8 0.11 3.8E-06 52.4 1.0 37 101-137 310-346 (807)
47 1iqz_A Ferredoxin; iron-sulfer 87.5 0.082 2.8E-06 37.1 -0.6 17 189-205 8-24 (81)
48 1jb0_C Photosystem I iron-sulf 87.3 0.11 3.8E-06 35.7 0.0 18 189-206 44-61 (80)
49 1f2g_A Ferredoxin II; electron 87.3 0.096 3.3E-06 34.0 -0.4 16 190-205 6-21 (58)
50 1dax_A Ferredoxin I; electron 87.2 0.082 2.8E-06 35.1 -0.8 16 189-204 8-23 (64)
51 1ep3_B Dihydroorotate dehydrog 86.8 0.31 1E-05 41.3 2.5 29 94-122 220-251 (262)
52 1xer_A Ferredoxin; electron tr 86.6 0.1 3.5E-06 37.9 -0.6 18 188-205 41-58 (103)
53 2gag_A Heterotetrameric sarcos 86.6 0.72 2.4E-05 46.8 5.4 58 66-127 30-101 (965)
54 1sj1_A Ferredoxin; thermostabi 86.5 0.099 3.4E-06 34.5 -0.6 17 189-205 8-24 (66)
55 1rof_A Ferredoxin; electron tr 86.5 0.12 4E-06 33.4 -0.3 17 189-205 7-23 (60)
56 3i9v_9 NADH-quinone oxidoreduc 86.1 0.12 4E-06 41.3 -0.5 17 189-205 95-111 (182)
57 1jb0_C Photosystem I iron-sulf 85.8 0.14 4.7E-06 35.3 -0.2 17 189-205 7-23 (80)
58 1xer_A Ferredoxin; electron tr 85.4 0.16 5.5E-06 36.9 -0.0 18 189-206 80-97 (103)
59 3eun_A Ferredoxin; electron tr 84.8 0.2 6.9E-06 35.2 0.3 16 190-205 6-21 (82)
60 2fdn_A Ferredoxin; electron tr 84.8 0.2 7E-06 32.2 0.3 16 190-205 6-21 (55)
61 2fgo_A Ferredoxin; allochromat 84.8 0.2 6.9E-06 35.0 0.3 16 190-205 6-21 (82)
62 2zvs_A Uncharacterized ferredo 84.6 0.47 1.6E-05 33.4 2.2 40 189-228 34-82 (85)
63 1dwl_A Ferredoxin I; electron 84.5 0.23 7.8E-06 31.9 0.4 15 190-204 7-21 (59)
64 2fdn_A Ferredoxin; electron tr 84.4 0.17 5.8E-06 32.6 -0.3 16 190-205 35-50 (55)
65 7fd1_A FD1, protein (7-Fe ferr 84.1 0.2 6.8E-06 36.9 -0.0 17 190-206 37-53 (106)
66 2zvs_A Uncharacterized ferredo 84.0 0.21 7.3E-06 35.3 0.1 17 189-205 5-21 (85)
67 1rgv_A Ferredoxin; electron tr 83.3 0.25 8.4E-06 34.4 0.2 16 190-205 6-21 (80)
68 1bc6_A 7-Fe ferredoxin; electr 83.0 0.17 5.8E-06 35.0 -0.8 18 190-207 37-54 (77)
69 1h98_A Ferredoxin; electron tr 82.4 0.21 7.1E-06 34.7 -0.5 17 190-206 37-53 (78)
70 2v2k_A Ferredoxin; iron, trans 81.3 0.28 9.5E-06 35.9 -0.2 17 190-206 37-53 (105)
71 1kf6_B Fumarate reductase iron 79.2 0.38 1.3E-05 40.7 -0.1 18 188-205 200-217 (243)
72 2wdq_B Succinate dehydrogenase 78.8 0.33 1.1E-05 40.9 -0.6 18 188-205 202-219 (238)
73 1dwl_A Ferredoxin I; electron 78.6 0.69 2.4E-05 29.5 1.1 15 191-205 40-54 (59)
74 3gyx_B Adenylylsulfate reducta 78.4 0.43 1.5E-05 38.7 0.0 17 190-206 44-60 (166)
75 1f2g_A Ferredoxin II; electron 78.1 0.51 1.7E-05 30.3 0.3 17 190-206 38-54 (58)
76 1jnr_B Adenylylsulfate reducta 77.9 0.44 1.5E-05 37.9 -0.0 16 190-205 45-60 (150)
77 2q5w_D Molybdopterin convertin 77.9 3.8 0.00013 28.2 4.9 56 69-136 19-74 (77)
78 1dax_A Ferredoxin I; electron 77.6 0.57 1.9E-05 30.8 0.4 17 190-206 42-58 (64)
79 7fd1_A FD1, protein (7-Fe ferr 77.4 0.6 2.1E-05 34.3 0.6 17 189-205 5-23 (106)
80 2h88_B Succinate dehydrogenase 77.1 0.39 1.3E-05 41.1 -0.6 18 188-205 211-228 (252)
81 2l32_A Small archaeal modifier 77.0 1.9 6.5E-05 30.6 3.2 47 70-135 15-61 (74)
82 2bs2_B Quinol-fumarate reducta 76.9 0.48 1.7E-05 40.0 -0.1 19 187-205 203-221 (241)
83 1vjk_A Molybdopterin convertin 75.2 7.7 0.00026 28.3 6.2 61 69-133 30-91 (98)
84 3rpf_C Molybdopterin convertin 74.6 13 0.00043 25.6 6.9 52 76-136 20-71 (74)
85 1iqz_A Ferredoxin; iron-sulfer 72.2 0.97 3.3E-05 31.4 0.5 17 190-206 49-65 (81)
86 3eun_A Ferredoxin; electron tr 71.9 0.86 2.9E-05 31.8 0.2 17 190-206 35-57 (82)
87 1hfe_L Protein (Fe-only hydrog 71.6 0.95 3.2E-05 41.9 0.5 19 189-207 63-81 (421)
88 1h98_A Ferredoxin; electron tr 71.6 1 3.5E-05 31.1 0.5 17 189-205 5-23 (78)
89 1bc6_A 7-Fe ferredoxin; electr 71.6 0.98 3.3E-05 31.0 0.4 16 190-205 6-23 (77)
90 1hfe_L Protein (Fe-only hydrog 70.8 0.72 2.5E-05 42.7 -0.5 18 188-205 31-48 (421)
91 2fgo_A Ferredoxin; allochromat 70.7 2.4 8.1E-05 29.3 2.3 34 190-223 35-76 (82)
92 1rgv_A Ferredoxin; electron tr 69.8 0.84 2.9E-05 31.6 -0.2 17 190-206 35-57 (80)
93 3vr8_B Iron-sulfur subunit of 69.8 1.1 3.8E-05 39.7 0.5 19 187-205 234-252 (282)
94 3po0_A Small archaeal modifier 68.7 11 0.00039 26.5 5.7 66 68-136 20-86 (89)
95 2v2k_A Ferredoxin; iron, trans 66.4 1.5 5.3E-05 31.8 0.6 17 189-205 5-23 (105)
96 2c42_A Pyruvate-ferredoxin oxi 66.2 0.97 3.3E-05 47.6 -0.8 18 188-205 684-701 (1231)
97 2l05_A Serine/threonine-protei 66.0 19 0.00066 27.1 6.6 67 63-141 25-95 (95)
98 1tyg_B YJBS; alpha beta barrel 64.9 16 0.00054 26.7 5.9 54 66-137 28-85 (87)
99 1wgk_A Riken cDNA 2900073H19 p 63.7 44 0.0015 25.3 8.5 71 67-138 31-107 (114)
100 2c42_A Pyruvate-ferredoxin oxi 63.5 1.3 4.4E-05 46.7 -0.5 16 189-204 741-756 (1231)
101 3mm5_B Sulfite reductase, diss 63.3 1.5 5.1E-05 39.9 -0.0 18 188-205 237-254 (366)
102 3kvp_A Uncharacterized protein 63.3 2.7 9.2E-05 30.2 1.3 13 49-61 39-51 (72)
103 1ti6_B Pyrogallol hydroxytrans 63.0 1.9 6.6E-05 37.7 0.6 17 189-205 96-112 (274)
104 1f0z_A THis protein; ubiquitin 61.7 13 0.00043 25.1 4.6 49 72-136 12-63 (66)
105 3or1_B Sulfite reductase beta; 61.4 1.4 4.9E-05 40.4 -0.5 17 189-205 255-271 (386)
106 3c8y_A Iron hydrogenase 1; dit 60.2 1.5 5.2E-05 42.1 -0.6 20 188-207 186-205 (574)
107 2kl0_A Putative thiamin biosyn 58.6 18 0.00062 25.3 5.1 47 76-137 14-63 (73)
108 3u7z_A Putative metal binding 58.3 13 0.00045 28.1 4.5 39 41-87 2-40 (101)
109 1kqf_B FDH-N beta S, formate d 58.1 2.1 7.1E-05 37.7 -0.0 17 189-205 130-146 (294)
110 3cf4_A Acetyl-COA decarboxylas 57.5 2.4 8.1E-05 42.8 0.3 19 187-205 450-468 (807)
111 2qjl_A URM1, ubiquitin-related 57.4 51 0.0017 23.8 7.6 68 66-136 20-96 (99)
112 2vpz_B NRFC protein; oxidoredu 57.4 1.8 6.2E-05 35.7 -0.5 17 189-205 87-103 (195)
113 2ivf_B Ethylbenzene dehydrogen 57.3 1.8 6.3E-05 39.4 -0.5 17 189-205 181-197 (352)
114 1rws_A Hypothetical protein PF 57.3 8.7 0.0003 26.9 3.2 49 71-136 26-74 (77)
115 2gmh_A Electron transfer flavo 57.2 2.2 7.6E-05 40.6 -0.0 19 187-205 548-566 (584)
116 2k5p_A THis protein, thiamine- 56.5 15 0.00051 26.1 4.4 48 76-137 17-67 (78)
117 1ryj_A Unknown; beta/alpha pro 54.5 44 0.0015 22.7 6.5 52 66-136 16-67 (70)
118 1wxm_A A-RAF proto-oncogene se 52.8 45 0.0015 24.6 6.5 66 63-140 15-84 (86)
119 1fm0_D Molybdopterin convertin 52.5 22 0.00074 24.4 4.6 57 67-133 18-74 (81)
120 3i9v_3 NADH-quinone oxidoreduc 51.3 3.2 0.00011 41.2 0.1 18 191-208 219-236 (783)
121 2cu3_A Unknown function protei 51.0 29 0.001 23.1 5.0 46 76-136 13-61 (64)
122 2hj1_A Hypothetical protein; s 50.9 44 0.0015 24.8 6.3 51 66-127 26-77 (97)
123 3j16_B RLI1P; ribosome recycli 50.6 3 0.0001 40.5 -0.3 15 191-205 54-68 (608)
124 3ny5_A Serine/threonine-protei 50.1 67 0.0023 24.2 7.2 66 65-142 23-92 (96)
125 1q16_B Respiratory nitrate red 49.4 2.9 9.9E-05 40.1 -0.6 17 189-205 214-230 (512)
126 1kqf_B FDH-N beta S, formate d 48.7 2.2 7.5E-05 37.5 -1.4 20 186-205 33-52 (294)
127 1gte_A Dihydropyrimidine dehyd 48.6 3.5 0.00012 42.1 -0.2 15 190-204 984-998 (1025)
128 2l52_A Methanosarcina acetivor 48.4 21 0.00072 26.0 4.2 56 76-133 27-92 (99)
129 1gte_A Dihydropyrimidine dehyd 48.1 2.5 8.4E-05 43.2 -1.4 17 188-204 949-965 (1025)
130 3mm5_A Sulfite reductase, diss 47.0 3.4 0.00012 38.5 -0.5 18 189-206 283-300 (418)
131 2pmv_A Gastric intrinsic facto 44.8 31 0.0011 32.0 5.6 53 42-98 290-343 (399)
132 3bk7_A ABC transporter ATP-bin 43.5 4.8 0.00016 39.0 -0.1 14 191-204 68-81 (607)
133 2g1e_A Hypothetical protein TA 42.1 45 0.0015 23.1 5.0 56 76-133 24-83 (90)
134 1rrb_A RAF-1 RBD, RAF proto-on 41.6 31 0.0011 26.5 4.2 66 66-143 29-101 (107)
135 3dwg_C 9.5 kDa culture filtrat 41.3 66 0.0023 22.6 5.9 61 76-137 25-91 (93)
136 1h0h_B Formate dehydrogenase ( 39.7 7 0.00024 32.6 0.3 17 189-205 105-123 (214)
137 3hvz_A Uncharacterized protein 39.5 43 0.0015 23.8 4.5 53 51-126 7-59 (78)
138 3or1_A Sulfite reductase alpha 38.2 6.4 0.00022 37.0 -0.1 18 188-205 299-316 (437)
139 2bb6_A TCII, TC II, transcobal 38.0 45 0.0015 31.1 5.6 62 45-118 316-377 (414)
140 2pa8_D DNA-directed RNA polyme 34.8 6.8 0.00023 33.8 -0.5 16 189-204 200-215 (265)
141 2vpz_B NRFC protein; oxidoredu 29.3 12 0.00043 30.6 0.2 18 189-206 55-74 (195)
142 2vdc_G Glutamate synthase [NAD 29.2 13 0.00046 34.0 0.5 22 185-206 15-38 (456)
143 1ti6_B Pyrogallol hydroxytrans 24.7 15 0.0005 32.0 -0.2 18 189-206 123-153 (274)
144 1v86_A DNA segment, CHR 7, way 23.9 1.6E+02 0.0056 20.7 5.5 35 44-88 14-48 (95)
145 2ivf_B Ethylbenzene dehydrogen 23.6 16 0.00054 33.2 -0.2 19 188-206 147-167 (352)
146 1uh6_A Ubiquitin-like 5; beta- 22.8 1.1E+02 0.0038 22.7 4.5 46 34-88 15-60 (100)
147 2kmm_A Guanosine-3',5'-BIS(dip 22.7 45 0.0016 22.1 2.1 42 68-126 13-54 (73)
148 1q16_B Respiratory nitrate red 22.2 19 0.00064 34.5 0.0 17 189-205 241-266 (512)
149 1h0h_B Formate dehydrogenase ( 21.4 21 0.0007 29.7 0.1 28 189-219 134-170 (214)
No 1
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=100.00 E-value=3e-57 Score=407.57 Aligned_cols=198 Identities=56% Similarity=1.060 Sum_probs=177.2
Q ss_pred hhhhhccCCccCCCCceEEEEEEeeCCCC-CCCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcce
Q 026956 31 EAEAQKVEPKASANTDTKKFQIYRWNPDS-PSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCA 109 (230)
Q Consensus 31 ~~~~~~~~~~~~~~~~~v~lkI~Rfdp~~-d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCa 109 (230)
-+++...++.+....++++|+||||||+. +++|||++|+|++++.++||||+|++|+.+++|+|+|++||++|+||+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~I~R~~p~~~~~~p~~~~~~v~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~ 98 (282)
T 3vr8_B 19 ARYASAATAAAPTGKRIKTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCA 98 (282)
T ss_pred HHhhhhccCcccCCCeeEEEEEEEeCCCCCCCCCCcEEEEEEeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCE
Confidence 33443455556667789999999999984 77899999999997547999999999998889999999999999999999
Q ss_pred EEeCCeeeccccccccC-CCCceEEeeCCCCcceeeeeechhhHHHHhhhcccccccCCCCCCCCCCCCCCHHHHHHHhc
Q 026956 110 MNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDG 188 (230)
Q Consensus 110 V~ING~~~LAC~t~v~~-~~~~itIEPL~~~pvirDLvVD~~~f~~k~k~vkp~l~~~~~~~~~~~e~~~~pe~~~~~~~ 188 (230)
|+|||++++||.|++.+ .++++|||||++||||||||||++.||++|++++||+.++......+.+.+|+|+++++++.
T Consensus 99 V~InG~~~laC~t~v~~~~~~~~tIepL~~~pVikDLvvD~~~f~~~~~~v~p~l~~~~~~~~~~~~~~qs~~~~~~~~~ 178 (282)
T 3vr8_B 99 MNIAGENTLACICNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDG 178 (282)
T ss_pred EEECCEEecchhhhHhHhcCCcEEeccCCCCceeeccccccHHHHHHHHHHhhhcCCCCCCCCCchhcccCHHHHHHHHh
Confidence 99999999999999984 56889999999999999999999999999999999999876543345678999999999999
Q ss_pred HHHhhhhchhhhcccCcccCCCCCcCHHHHHHHHHhcccc
Q 026956 189 MYECILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSN 228 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~~~~~~~FlGPaal~~a~R~~~~~ 228 (230)
+..||+||+|+++||++++++++|+||++++++|||++|.
T Consensus 179 ~~~CI~CG~C~~aCP~~~~~~~~~lGP~~li~a~r~~~d~ 218 (282)
T 3vr8_B 179 LYECILCACCSASCPSYWWNADKYLGPAVLMQAYRWIIDS 218 (282)
T ss_pred hhhCcccCcCcccCCceeccCCcCCCHHHHHHHHHHHhCC
Confidence 9999999999999999988767899999999999998764
No 2
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=100.00 E-value=4e-50 Score=352.54 Aligned_cols=187 Identities=61% Similarity=1.182 Sum_probs=166.4
Q ss_pred CCCCceEEEEEEeeCCCCCC-CCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc
Q 026956 42 SANTDTKKFQIYRWNPDSPS-KPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC 120 (230)
Q Consensus 42 ~~~~~~v~lkI~Rfdp~~d~-~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC 120 (230)
.++.++++|+||||||+.++ +|||++|+|++++.++||||+|++++.+++|+|+|+++|+.|+||+|+|+|||+++|||
T Consensus 6 ~~~~~~~~~~i~R~~~~~~~~~~~~~~~~v~~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G~~~~aC 85 (252)
T 2h88_B 6 AATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLAC 85 (252)
T ss_dssp --CCCEEEEEEEECCTTSTTSCCEEEEEEEEGGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETTEEEEGG
T ss_pred CCCCceEEEEEEEeCCCCCCCCceEEEEEEecCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECCcEEccc
Confidence 34468899999999999987 89999999998643799999999998778999999999999999999999999999999
Q ss_pred cccccCC-CCceEEeeCCCCcceeeeeechhhHHHHhhhcccccccCCCCCCCCCCCCCCHHHHHHHhcHHHhhhhchhh
Q 026956 121 LTKISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCS 199 (230)
Q Consensus 121 ~t~v~~~-~~~itIEPL~~~pvirDLvVD~~~f~~k~k~vkp~l~~~~~~~~~~~e~~~~pe~~~~~~~~~~CI~CG~C~ 199 (230)
.|++.+. ++++|||||++||++|||+||++.|++++++++||+...........+.+++|++++++.+...||.||+|+
T Consensus 86 ~~~~~~~~g~~~~iepl~~~pvikDLvvD~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~Ci~CG~C~ 165 (252)
T 2h88_B 86 TKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCS 165 (252)
T ss_dssp GSBCCCCTTSCEEEECSTTCBEEETTEECCHHHHHHHHHTCCSCCCSCCTTTTSSCCCCCHHHHHTTTTTTTCCCCCTTG
T ss_pred cCCHhHcCCCceEEecccCCCccccceeccHHHHHHhhhccCccccCCCCCCccccccCCHHHHHHhHhHHhchhhCcch
Confidence 9999874 458999999999999999999999999999999999876542212345889999999999999999999999
Q ss_pred hcccCcccCCCCCcCHHHHHHHHHhcccc
Q 026956 200 TSCPSYWWTSEAYLGPAALLHANSIGLSN 228 (230)
Q Consensus 200 saCP~~~~~~~~FlGPaal~~a~R~~~~~ 228 (230)
++||++..+++.|+||++++++||+..|+
T Consensus 166 ~~CP~~~~~~~~~lgP~~~~~~~r~~~~~ 194 (252)
T 2h88_B 166 TSCPSYWWNGDKYLGPAVLMQAYRWMIDS 194 (252)
T ss_dssp GGCHHHHHHTTTCCHHHHHHHHHHHHTCT
T ss_pred hhCCCCccCCCCcCCHHHHHHHHHHhhCC
Confidence 99999976555799999999999997764
No 3
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=100.00 E-value=1.4e-48 Score=339.30 Aligned_cols=181 Identities=29% Similarity=0.565 Sum_probs=164.2
Q ss_pred CceEEEEEEeeCCCCC-CCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeecccccc
Q 026956 45 TDTKKFQIYRWNPDSP-SKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTK 123 (230)
Q Consensus 45 ~~~v~lkI~Rfdp~~d-~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~ 123 (230)
..+++|+||||||+.| ++|||++|+|++++ ++||||+|++++.+++|+|+|+++|+.|+||+|+|+|||++++||.++
T Consensus 2 ~~~~~~~i~R~~~~~~~~~~~~~~~~v~~~~-~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~ 80 (241)
T 2bs2_B 2 GRMLTIRVFKYDPQSAVSKPHFQEYKIEEAP-SMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTL 80 (241)
T ss_dssp CCEEEEEEEECCTTCTTCCCEEEEEEEECCT-TCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCB
T ss_pred CceEEEEEEEeCCCCCCCCceEEEEEEeCCC-CChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECCCeecchhCc
Confidence 4679999999999998 89999999999987 999999999999888999999999999999999999999999999999
Q ss_pred ccCC-CCceEEeeCCCCcceeeeeechhhHHHHh-hhcccccccCCCCCCCCCCC-CCCHHHHHHHhcHHHhhhhchhhh
Q 026956 124 ISPS-GSASTITPLPHMFVIKDLVVDMTNFYNQY-KSIEPWLKRKNPPPMPGKEI-PQSKKDRAKLDGMYECILCACCST 200 (230)
Q Consensus 124 v~~~-~~~itIEPL~~~pvirDLvVD~~~f~~k~-k~vkp~l~~~~~~~~~~~e~-~~~pe~~~~~~~~~~CI~CG~C~s 200 (230)
+.++ ++++|||||++||+++||+||+++|++++ ++++||+..+.... ++.+. ++++++++.+.+...||.||+|++
T Consensus 81 ~~~~~g~~~~ie~l~~~pvikDLvvD~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~ 159 (241)
T 2bs2_B 81 TKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHD-ISKLEERIEPEVAQEVFELDRCIECGCCIA 159 (241)
T ss_dssp GGGCTTSEEEEECCTTSEEEETTEEECHHHHHHHHHHTTCSCCCSSCCC-TTSCCCCCCHHHHHHHHHHHTCCCCCHHHH
T ss_pred HhHcCCCeEEEecCCCCCcceeceeeCHHHHHHHHHHhcCeeccCCCCC-CccccccCCHHHHHHhhhhhhhhccCcCcc
Confidence 9874 36899999999999999999999999999 99999998765432 23334 499999999999999999999999
Q ss_pred cccCcccCCCCCcCHHHHHHHHHhcccc
Q 026956 201 SCPSYWWTSEAYLGPAALLHANSIGLSN 228 (230)
Q Consensus 201 aCP~~~~~~~~FlGPaal~~a~R~~~~~ 228 (230)
+||+...+ .+|+||.+++++||+..|+
T Consensus 160 ~CP~~~~~-~~~~~p~~~~~~~~~~~~~ 186 (241)
T 2bs2_B 160 ACGTKIMR-EDFVGAAGLNRVVRFMIDP 186 (241)
T ss_dssp TCHHHHHC-TTCCHHHHHHHHHHHHTCT
T ss_pred cCCCCccC-CCCCCHHHHHHHHHHhhCc
Confidence 99999866 4799999999999997653
No 4
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=100.00 E-value=1.5e-44 Score=312.90 Aligned_cols=179 Identities=52% Similarity=1.033 Sum_probs=159.3
Q ss_pred eEEEEEEeeCCCCCCCCceEEEEEeecCC-ChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeecccccccc
Q 026956 47 TKKFQIYRWNPDSPSKPELKEFEINLKEC-GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIS 125 (230)
Q Consensus 47 ~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~-~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~ 125 (230)
+++|+||||||++|++|||++|+|+++++ ++||||+|++++.+ +|+|+|+.||++|+||+|+|+|||+++|||.|++.
T Consensus 2 ~~~~~i~R~~~~~~~~~~~~~~~v~~~~~~~~tll~~l~~~~~~-~~~l~~~~~C~~g~Cg~C~v~v~G~~~laC~~~~~ 80 (238)
T 2wdq_B 2 RLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEK-DPSLSFRRSCREGVCGSDGLNMNGKNGLACITPIS 80 (238)
T ss_dssp EEEEEEEECCTTTCSSCEEEEEEEECCTTCCCBHHHHHHHHHHH-CTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGG
T ss_pred eEEEEEEEcCCCCCCCCceEEEEeecCCCCCChHHHHHHHhccc-CCCccccccCCCCCCCCCEEEECCEEEcccccchh
Confidence 58999999999999999999999998642 79999999999855 99999999999999999999999999999999998
Q ss_pred C-C--CCceEEeeCCCCcceeeeeechhhHHHHhhhcccccccCCCCCCCCCCCCCCHHHHHHHhcHHHhhhhchhhhcc
Q 026956 126 P-S--GSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSC 202 (230)
Q Consensus 126 ~-~--~~~itIEPL~~~pvirDLvVD~~~f~~k~k~vkp~l~~~~~~~~~~~e~~~~pe~~~~~~~~~~CI~CG~C~saC 202 (230)
+ | ++.+|||||.++|+|+||++|++.|+++++++++|+..+.... +..+..+++++.+.+.+...||.||.|+++|
T Consensus 81 ~~g~~~~~~~ie~l~~~pvi~dlv~d~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~C 159 (238)
T 2wdq_B 81 ALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNP-PAREHLQMPEQREKLDGLYECILCACCSTSC 159 (238)
T ss_dssp GTCCTTSCEEEECCTTSBEEETTEECCHHHHHHHHHTCCSCCCCCSSC-CSSSCCCCHHHHHTTTTTTTCCCCCTTGGGC
T ss_pred hhccCCCCEEEeeCCCCcchhhceechHHHHHHHHhhcCccccCcCCC-CcccccCCHHHHHHHhccccccccCCchhhC
Confidence 7 2 2359999999999999999999999999999999997755321 2345789999999999999999999999999
Q ss_pred cCcccCCCCCcCHHHHHHHHHhccc
Q 026956 203 PSYWWTSEAYLGPAALLHANSIGLS 227 (230)
Q Consensus 203 P~~~~~~~~FlGPaal~~a~R~~~~ 227 (230)
|.+..+.+.|+||.++++++|+..|
T Consensus 160 P~~~~~~~~~~~p~~~~~~~r~~~~ 184 (238)
T 2wdq_B 160 PSFWWNPDKFIGPAGLLAAYRFLID 184 (238)
T ss_dssp HHHHHCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCccCCCCCCCHHHHHHHHHHHhC
Confidence 9997654459999999999998654
No 5
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=100.00 E-value=9.8e-44 Score=308.67 Aligned_cols=177 Identities=30% Similarity=0.572 Sum_probs=160.9
Q ss_pred eEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC
Q 026956 47 TKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP 126 (230)
Q Consensus 47 ~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~ 126 (230)
+++|+||||||++|++|||+.|+|++++ ++||||+|++++.+++|+|+|+++|++|+||+|+|+|||++++||.|++.+
T Consensus 5 ~~~~~i~R~~~~~~~~~~~~~~~~~~~~-~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G~~~~aC~~~~~~ 83 (243)
T 1kf6_B 5 NLKIEVVRYNPEVDTAPHSAFYEVPYDA-TTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRD 83 (243)
T ss_dssp EEEEEEEECCTTTCSSCEEEEEEEEECT-TCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCBGGG
T ss_pred eEEEEEEEcCCCCCCCCeeEEEEEecCC-CChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECCEEEeeeeeEHhh
Confidence 5899999999999999999999999987 999999999998677999999999999999999999999999999999997
Q ss_pred CCCceEEeeCCCCcceeeeeechhhHHHHhhhcccccccCCCCCCCCCC-CCCCHHHHHHHhcHHHhhhhchhhhcccCc
Q 026956 127 SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKE-IPQSKKDRAKLDGMYECILCACCSTSCPSY 205 (230)
Q Consensus 127 ~~~~itIEPL~~~pvirDLvVD~~~f~~k~k~vkp~l~~~~~~~~~~~e-~~~~pe~~~~~~~~~~CI~CG~C~saCP~~ 205 (230)
+.+.++||||+.++++|||++|++.|+++|+.++||+..+... ++.+ ..+++++.+.+.+...||.||.|+++||..
T Consensus 84 ~~~~~~i~~l~~~~~~kdl~~dl~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~~ 161 (243)
T 1kf6_B 84 YTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRT--ADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQF 161 (243)
T ss_dssp CTTCEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCCC--GGGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHHH
T ss_pred CCCcEEEEecCCCCccceeEEecHHHHHHHHhcCCeeccCcCC--CccccccCCHHHHHHhhhhhhccccCccccccCCC
Confidence 6567999999999999999999999999999999999765431 2334 678899999999999999999999999998
Q ss_pred ccCCCCCcCHHHHHHHHHhccc
Q 026956 206 WWTSEAYLGPAALLHANSIGLS 227 (230)
Q Consensus 206 ~~~~~~FlGPaal~~a~R~~~~ 227 (230)
..+ .+|+||+++.+++|+..|
T Consensus 162 ~~~-~~~~gP~~~~~~~r~~~~ 182 (243)
T 1kf6_B 162 GLN-PEFIGPAAITLAHRYNED 182 (243)
T ss_dssp HHC-TTSCCHHHHHHHHHHHTC
T ss_pred ccc-CCCCCHHHHHHHHHHhhC
Confidence 765 359999999999998755
No 6
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=100.00 E-value=3.3e-39 Score=309.78 Aligned_cols=151 Identities=18% Similarity=0.360 Sum_probs=134.0
Q ss_pred CccCCCCceEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeec
Q 026956 39 PKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGL 118 (230)
Q Consensus 39 ~~~~~~~~~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~L 118 (230)
-+-+-+.++++|+||||||+.|++|||++|+|++++ ++||||+|.+|| +|+||+ ||+|+|||+|+|
T Consensus 16 ~~~~~~~~~~~~~i~R~~p~~~~~p~~~~y~v~~~~-~~~vLd~L~~ik-----~l~fr~--------sCam~ING~~~l 81 (514)
T 3kwl_A 16 RGSHMSVLKLHVKVFRFETNKDYNPAYESYFLEYQE-DQYLLDLLKQLK-----GVSYSE--------NIALKINQIAVF 81 (514)
T ss_dssp -CCCCCCCEEEEEEEECBTTSCSCCEEEEEEEECCT-TCBHHHHHTTST-----TCCCCS--------SCCEEETTEEEC
T ss_pred CCccccceEEEEEEEEeCCCCCCCCceEEEEEeCCC-CCcHHHHHHHhh-----hCeeec--------cceEEECCEehh
Confidence 344445789999999999999999999999999987 899999999998 688887 899999999999
Q ss_pred cccccccC----CCCceEEeeCCCCcceeeeeechhhHHHHhhhc---ccccccCCCCCCCCCCCCCCHHHHHHHhcHHH
Q 026956 119 ACLTKISP----SGSASTITPLPHMFVIKDLVVDMTNFYNQYKSI---EPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYE 191 (230)
Q Consensus 119 AC~t~v~~----~~~~itIEPL~~~pvirDLvVD~~~f~~k~k~v---kp~l~~~~~~~~~~~e~~~~pe~~~~~~~~~~ 191 (230)
| .|.+.+ +++.||||||++||||||||||++.||++|+++ +||+. |+++++++.+
T Consensus 82 a-~t~~~~~~~~~~~~i~iePl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~---------------~~~~~~~~~~-- 143 (514)
T 3kwl_A 82 E-DAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYIT---------------KGEKEELEKF-- 143 (514)
T ss_dssp S-CCBHHHHHHHHCSEEEEECSCSTTEEETTEECHHHHHGGGHHHHHTCTTSC---------------HHHHHGGGGT--
T ss_pred h-hhhHHHHhhccCCcEEEEECCCCcccccceeccHHHHHHHHHhhcCCCCCC---------------HHHHHHHhhc--
Confidence 9 666642 367899999999999999999999999999999 99983 5788888887
Q ss_pred hhhhchhhhcccCcccCCCCCcCHHHHHHHHHhcccc
Q 026956 192 CILCACCSTSCPSYWWTSEAYLGPAALLHANSIGLSN 228 (230)
Q Consensus 192 CI~CG~C~saCP~~~~~~~~FlGPaal~~a~R~~~~~ 228 (230)
| +|+++||++ | ++|+||++|++||||+.|.
T Consensus 144 -~---~C~~aCp~~--~-~~f~Gpa~l~~a~r~~~d~ 173 (514)
T 3kwl_A 144 -I---QINFINPQT--N-PKYLGDGFFLYVKWLMKRY 173 (514)
T ss_dssp -G---GGGGTCCCC--C-TTCCCHHHHHHHHHHHHHC
T ss_pred -C---hhhccCCCC--C-cccCcHHHHHHHHHHhcCC
Confidence 4 999999995 5 6799999999999999875
No 7
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=99.84 E-value=2.2e-21 Score=161.44 Aligned_cols=105 Identities=21% Similarity=0.296 Sum_probs=85.1
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC--CCCceEEeeCCCCccee
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP--SGSASTITPLPHMFVIK 143 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~--~~~~itIEPL~~~pvir 143 (230)
++|++++++ ++||||+|++++ +.++++.||++|+||+|+|+|||++++||.+++.+ +.+++|||||+++++
T Consensus 12 ~~~~v~~~~-~~tLL~~Lr~~~----gl~g~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~v~TiEgL~~~~~-- 84 (161)
T 1rm6_C 12 RAREDLVPD-NMLLLDYLRETV----GLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGT-- 84 (161)
T ss_dssp EEEEEEEET-TCBHHHHHHHTT----CCTTSCCCSSSSSSCTTEEEETTEEEEGGGSBGGGGTTSEEECGGGSSBTTB--
T ss_pred EEEEEecCC-cCcHHHHHHHcC----CCcccccCCCCCCCCCCEEEECCcEEechHHHHHHhCCceEEEECCCCCCCc--
Confidence 567888877 899999999975 24589999999999999999999999999999985 667899999987653
Q ss_pred eeeechhhHHHHhhhcccccccCCCCCCCCCCCCCCHHHHHHHhcHHHhhhhchhhhcccCcccCCCCCcCHHHHHHHHH
Q 026956 144 DLVVDMTNFYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHANS 223 (230)
Q Consensus 144 DLvVD~~~f~~k~k~vkp~l~~~~~~~~~~~e~~~~pe~~~~~~~~~~CI~CG~C~saCP~~~~~~~~FlGPaal~~a~R 223 (230)
++|.+...+ -..+|+||.|.+. .+..+|+
T Consensus 85 ----------------------------------~~p~q~a~~--~~~~~qCG~Ctpg---------------~im~a~~ 113 (161)
T 1rm6_C 85 ----------------------------------LSKLQAAFH--EKLGTQCGFCTPG---------------MIMASEA 113 (161)
T ss_dssp ----------------------------------CCHHHHHHH--HHTCCSSCSSHHH---------------HHHHHHH
T ss_pred ----------------------------------cCHHHHHHH--HhCCCcCCCCchH---------------HHHHHHH
Confidence 223332322 3467999999973 8889999
Q ss_pred hcccc
Q 026956 224 IGLSN 228 (230)
Q Consensus 224 ~~~~~ 228 (230)
|+.||
T Consensus 114 ll~~~ 118 (161)
T 1rm6_C 114 LLRKN 118 (161)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98776
No 8
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=99.78 E-value=4.5e-19 Score=147.99 Aligned_cols=70 Identities=27% Similarity=0.419 Sum_probs=60.6
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC--CCCceEEeeCCCCc
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP--SGSASTITPLPHMF 140 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~--~~~~itIEPL~~~p 140 (230)
+.|++++++ ++||||+|++.. +++ ++++||++|+||+|+|+|||++++||.+++.+ |.+++|||||.+++
T Consensus 19 ~~~~~~v~~-~~tlL~~Lr~~~-gl~---g~~~~C~~G~CGaC~V~vdG~~v~sC~~~~~~~~G~~v~Tiegl~~~~ 90 (168)
T 1t3q_A 19 KPRVFYVEP-RMHLADALREVV-GLT---GTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQAEGCSIETVEGLSQGE 90 (168)
T ss_dssp EEEEEEECT-TSBHHHHHHHTT-CCT---TSCCSCSSSSSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGTCCSS
T ss_pred EEEEEecCC-CCcHHHHHHhcC-CCC---ccccCCCCCCCCCcEEEECCCEeechhhHHHHhCCCeEEEEcCCCCcc
Confidence 567777777 899999999864 333 58999999999999999999999999999986 66789999998764
No 9
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=99.65 E-value=1e-16 Score=133.83 Aligned_cols=69 Identities=19% Similarity=0.324 Sum_probs=60.4
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeecccccccc--CCCCceEEeeCCCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIS--PSGSASTITPLPHM 139 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~--~~~~~itIEPL~~~ 139 (230)
+.|++++++ ++||||+||+.. + .+++++||++|.||+|+|+|||++++||.+++. +|.+++|||||.+.
T Consensus 13 ~~~~~~v~~-~~tLLd~LR~~l-g---ltg~k~gC~~G~CGaCtV~vdG~~v~sC~~~~~~~~G~~I~TiEgL~~~ 83 (163)
T 1ffv_A 13 KAQEKAVEP-RTLLIHFLREEL-N---LTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLANK 83 (163)
T ss_dssp EEEEEEECT-TCBHHHHHHHTS-C---CTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGTSBT
T ss_pred EEEEEecCC-CCcHHHHHHhcC-C---CcccccCCCCCCCCCCEEEECCcEecchHhhHHHhCCceEEEECCCCCC
Confidence 567788877 899999999864 2 458999999999999999999999999999998 56779999999753
No 10
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=99.62 E-value=3.2e-16 Score=131.19 Aligned_cols=68 Identities=16% Similarity=0.343 Sum_probs=59.9
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeecccccccc--CCCCceEEeeCCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIS--PSGSASTITPLPH 138 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~--~~~~~itIEPL~~ 138 (230)
+.|++++++ ++||||+||+.. + .+++++||++|.||+|+|+|||++++||.+++. +|.+++|||||.+
T Consensus 13 ~~~~~~v~~-~~tLLd~LR~~l-g---l~g~k~gC~~G~CGaCtV~vdG~~v~SC~~~~~~~~G~~V~TiEgL~~ 82 (166)
T 1n62_A 13 HPVEALVEP-RTLLIHFIREQQ-N---LTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAA 82 (166)
T ss_dssp EEEEEEECT-TCBHHHHHHHTS-C---CTTSCCCCSSSCSCTTEEEETTEEEEGGGSBGGGGTTCEEECGGGSSC
T ss_pred EEEEEecCC-CCcHHHHHHHcC-C---CCccccCCCCCCCCCCEEEECCcEEechhhhHHHhCCceEEEeCCCCC
Confidence 567788877 899999999864 2 458999999999999999999999999999997 5667999999985
No 11
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.61 E-value=4e-16 Score=129.96 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=64.7
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeecccccccc--CCCCceEEeeCCCCccee
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIS--PSGSASTITPLPHMFVIK 143 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~--~~~~~itIEPL~~~pvir 143 (230)
+.|++++++ ++||||+||+.. + ..++++||++|.||+|+|+|||++++||.+++. ++.+++|||||....
T Consensus 13 ~~~~v~v~p-~~tLLd~LR~~l-g---ltgtk~gC~~G~CGACtV~vdG~~v~sC~~~~~~~~G~~I~TiEgl~~~~--- 84 (160)
T 3hrd_D 13 EARSIVTEP-NKRLLDLLREDF-G---LTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAEDG--- 84 (160)
T ss_dssp EEEEEEECS-SSBHHHHHHTTS-C---CTTSCCSSSSSSSCTTEEEETTEEEEGGGSBGGGGTTEEEECGGGTSBTT---
T ss_pred EEEEEecCC-CCCHHHHHHHhc-C---CCccccccCCCCCCCCEEEECCEEEEchhhhhhhhCCCceEEeCCCCCCC---
Confidence 457788877 899999999753 2 357999999999999999999999999999997 566789999997532
Q ss_pred eeeechhhHHH
Q 026956 144 DLVVDMTNFYN 154 (230)
Q Consensus 144 DLvVD~~~f~~ 154 (230)
.|..-+++|.+
T Consensus 85 ~l~pvq~af~~ 95 (160)
T 3hrd_D 85 KPSLLQQCFLE 95 (160)
T ss_dssp BCCHHHHHHHH
T ss_pred ccCHHHHHHHH
Confidence 34444444444
No 12
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=99.46 E-value=8.5e-15 Score=122.47 Aligned_cols=65 Identities=23% Similarity=0.386 Sum_probs=57.0
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeC----------Ceeecccccccc--CCCCceEEeeC
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNID----------GCNGLACLTKIS--PSGSASTITPL 136 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~IN----------G~~~LAC~t~v~--~~~~~itIEPL 136 (230)
.+++++ +++|||+||+.. ++ .+.|.||++|.||+|+|+|| |++++||.+++. +|.+++|||+|
T Consensus 16 ~~~~~p-~~~Ll~~LR~~l-gl---tGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~~I~TiEGL 90 (164)
T 3nvw_A 16 EKNADP-ETTLLAYLRRKL-GL---RGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGI 90 (164)
T ss_dssp ETTCCT-TCBHHHHHHHTS-CC---TTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGGT
T ss_pred EecCCC-CCCHHHHHHHHc-CC---CCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCcceEEeccc
Confidence 567777 899999999864 34 47999999999999999999 999999999997 56789999999
Q ss_pred CC
Q 026956 137 PH 138 (230)
Q Consensus 137 ~~ 138 (230)
.+
T Consensus 91 ~~ 92 (164)
T 3nvw_A 91 GS 92 (164)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 13
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=99.43 E-value=2.2e-14 Score=136.30 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=58.8
Q ss_pred EEEEE-eecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe----CCeeeccccccccC--CCCceEEeeCCC
Q 026956 66 KEFEI-NLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI----DGCNGLACLTKISP--SGSASTITPLPH 138 (230)
Q Consensus 66 ~~y~v-~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I----NG~~~LAC~t~v~~--~~~~itIEPL~~ 138 (230)
+.|++ ++++ ++||||+||+ .+++ ++|.||++|.||+|+|+| ||++++||.+++.+ +.+++|||||++
T Consensus 10 ~~~~~~~~~~-~~~Ll~~Lr~--~~l~---g~k~gC~~G~CGaCtV~v~~~~~g~~v~sCl~~~~~~~g~~i~TiEgl~~ 83 (462)
T 2w3s_A 10 ETRRVRIEDP-TQSLLEWLRA--EGLT---GTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAGKALRTIEGIAA 83 (462)
T ss_dssp EEEEEECSCT-TCBHHHHHHH--TTCT---TSCCSCSSSSSCTTEEEEEETTEEEEEETTTCBGGGGTTCEEECGGGTSC
T ss_pred EEEEEecCCC-CCcHHHHHHH--cCCC---ccCCCCCCCCcCCcEEEEEecCCCeEEEchhhhHHHhCCCcEEEECCCCC
Confidence 67888 7777 8999999993 2555 799999999999999999 99999999999984 667999999974
No 14
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=99.40 E-value=1.3e-13 Score=140.15 Aligned_cols=81 Identities=21% Similarity=0.338 Sum_probs=65.4
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC---CCCceEEeeCCCCcce
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP---SGSASTITPLPHMFVI 142 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~---~~~~itIEPL~~~pvi 142 (230)
++|++++++ ++||||+||++. +.+++|.||++|.||+|+|+|||++++||.+++.+ +.+++|||||++.
T Consensus 11 ~~~~~~~~~-~~~ll~~Lr~~~----~l~g~k~gC~~g~CGaCtv~vdg~~~~sC~~~~~~~~~g~~i~Tiegl~~~--- 82 (907)
T 1vlb_A 11 IEQNLFVDA-EALLSDVLRQQL----GLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVGQP--- 82 (907)
T ss_dssp EEEEEEECT-TSBHHHHHHHTT----CCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECHHHHCBT---
T ss_pred EEEEEecCC-CChHHHHHHHhc----CCCeecCCCCCCCcCccEEEECCeEeechHhHHHHHcCCCcEEEECCCCCC---
Confidence 567888887 899999999975 25689999999999999999999999999999963 4568999999743
Q ss_pred eeeeechhhHHH
Q 026956 143 KDLVVDMTNFYN 154 (230)
Q Consensus 143 rDLvVD~~~f~~ 154 (230)
..|..-+++|.+
T Consensus 83 ~~~~~~q~a~~~ 94 (907)
T 1vlb_A 83 ENLHPLQKAWVL 94 (907)
T ss_dssp TBCCHHHHHHHH
T ss_pred cCcCHHHHHHHH
Confidence 234444444444
No 15
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=99.36 E-value=2.9e-13 Score=137.55 Aligned_cols=80 Identities=20% Similarity=0.349 Sum_probs=63.2
Q ss_pred EEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC---CCCceEEeeCCCCccee
Q 026956 67 EFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP---SGSASTITPLPHMFVIK 143 (230)
Q Consensus 67 ~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~---~~~~itIEPL~~~pvir 143 (230)
.|++++++ ++||||+||+.. + ..++|.||++|.||+|+|+|||++++||.+++.+ +.+++|||||++. .
T Consensus 12 ~~~~~~~~-~~~ll~~Lr~~~-~---l~g~k~gC~~G~CGaCtv~vdg~~v~sC~~~~~~~~~g~~i~TiEgl~~~---~ 83 (907)
T 1dgj_A 12 ARRLLVSP-NDLLVDVLRSQL-Q---LTSVKVGCGKGQCGACTVILDGKVVRACIIKMSRVAENASVTTLEGIGAP---D 83 (907)
T ss_dssp CCEEEECT-TCBHHHHHHHTT-C---CTTSCCSSSSSSSCTTEEEETTEEEEGGGCBGGGSCTTCEEECGGGTCBT---T
T ss_pred EEEEecCC-CCcHHHHHHHhc-C---CCccCCCCCCCCcCceEEEECCeEeehhHhHHHHHcCCCcEEEECCCCCC---c
Confidence 45667777 899999999864 3 4589999999999999999999999999999963 4568999999743 2
Q ss_pred eeeechhhHHH
Q 026956 144 DLVVDMTNFYN 154 (230)
Q Consensus 144 DLvVD~~~f~~ 154 (230)
.|..-+++|.+
T Consensus 84 ~~~~~q~a~~~ 94 (907)
T 1dgj_A 84 CLHPLQHAWIQ 94 (907)
T ss_dssp BCCHHHHHHHH
T ss_pred ccCHHHHHHHH
Confidence 34444444443
No 16
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=99.09 E-value=6.6e-11 Score=114.61 Aligned_cols=65 Identities=22% Similarity=0.266 Sum_probs=54.0
Q ss_pred EeecCCChhHHHHHHHhhhccCCCcccccCc-C-CCccCcceEEeCCe-eeccccccccCCCCceEEeeC
Q 026956 70 INLKECGPMVLDALIKIKSEIDPSLTFRRSC-R-EGICGSCAMNIDGC-NGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 70 v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gC-r-~GiCGsCaV~ING~-~~LAC~t~v~~~~~~itIEPL 136 (230)
|++++ ++|||++|+.++ -..|++.++.+| . .|.||+|.|.|||+ +++||.|++.+|-.+.|.+|.
T Consensus 11 v~v~~-g~tiL~a~~~~g-i~ip~lC~~~~~~~~~G~Cg~C~V~v~g~~~~~aC~t~v~~gm~V~T~~~~ 78 (574)
T 3c8y_A 11 FNTDE-DTTILKFARDNN-IDISALCFLNNCNNDINKCEICTVEVEGTGLVTACDTLIEDGMIINTNSDA 78 (574)
T ss_dssp EEECC-CCBHHHHHHHTT-CCCCCSSCBTTBCCSSSCCCTTEEEETTTEEEEGGGCBCCTTCEEESSCHH
T ss_pred EEeCC-CCHHHHHHHHcC-CCCCcccCCCCCCCCcccCCCCEEEeCCCcccccCCCCcccceeEEecchh
Confidence 44556 899999999986 558899998888 6 89999999999999 899999999976445555544
No 17
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.99 E-value=4.4e-11 Score=119.40 Aligned_cols=62 Identities=19% Similarity=0.323 Sum_probs=49.9
Q ss_pred EEEEeecCCChhHHHHHHHhhhccCCCcccccC-cCCCccCcceEEeCC-----------------------eeeccccc
Q 026956 67 EFEINLKECGPMVLDALIKIKSEIDPSLTFRRS-CREGICGSCAMNIDG-----------------------CNGLACLT 122 (230)
Q Consensus 67 ~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~g-Cr~GiCGsCaV~ING-----------------------~~~LAC~t 122 (230)
+++| .+ |+|||++++.++ ...|++.|+.. +..|.||.|.|.||| ++++||.|
T Consensus 10 ~~~v--~~-g~til~a~~~~g-i~ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~~~~~aC~t 85 (783)
T 3i9v_3 10 IVEV--PP-GTSVMDAVFHAG-YDVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVT 85 (783)
T ss_dssp EEEE--CT-TCBHHHHHHHTT-CCCCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCBCSSCEETTTC
T ss_pred EEEe--CC-CChHHHHHHHhC-CCccccCCCCCCCCCcccCCcEEEecccccccccccccccccccccccCCCcccccCC
Confidence 4544 46 899999999998 45688887765 468999999999964 68899999
Q ss_pred cccCCCCceEEee
Q 026956 123 KISPSGSASTITP 135 (230)
Q Consensus 123 ~v~~~~~~itIEP 135 (230)
++.+| +.|+.
T Consensus 86 ~v~~g---m~v~t 95 (783)
T 3i9v_3 86 AVADG---MVVDT 95 (783)
T ss_dssp BCCSS---EEEES
T ss_pred CCCCC---CEEEE
Confidence 99976 66664
No 18
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=98.90 E-value=2.6e-10 Score=119.90 Aligned_cols=68 Identities=22% Similarity=0.370 Sum_probs=57.9
Q ss_pred EEEEE-eecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeC----------Ceeecccccccc--CCCCceE
Q 026956 66 KEFEI-NLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNID----------GCNGLACLTKIS--PSGSAST 132 (230)
Q Consensus 66 ~~y~v-~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~IN----------G~~~LAC~t~v~--~~~~~it 132 (230)
+.+++ ++++ ++||||+||+-. +++ +.+.||++|.||+|+|+|| |+++.||.+++. +|.+++|
T Consensus 13 ~~~~~~~~~p-~~~ll~~LR~~~-~lt---gtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 87 (1332)
T 3unc_A 13 KKVVEKNADP-ETTLLAYLRRKL-GLR---GTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTT 87 (1332)
T ss_dssp EEEEETTCCT-TCBHHHHHHHTS-CCT---TSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEEC
T ss_pred EEEEeecCCC-CCCHHHHHhhhc-CCC---CcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCEEEE
Confidence 34654 5777 899999999854 455 7999999999999999995 999999999997 5778999
Q ss_pred EeeCCC
Q 026956 133 ITPLPH 138 (230)
Q Consensus 133 IEPL~~ 138 (230)
||+|.+
T Consensus 88 iEgl~~ 93 (1332)
T 3unc_A 88 VEGIGS 93 (1332)
T ss_dssp GGGTCC
T ss_pred eccccC
Confidence 999975
No 19
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.77 E-value=1.2e-08 Score=76.02 Aligned_cols=58 Identities=29% Similarity=0.544 Sum_probs=46.5
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeC-Ce-----------------eeccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNID-GC-----------------NGLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~IN-G~-----------------~~LAC~t~v~~~~~ 129 (230)
.++++++ ++|||++|+..+ +...++|+.|.||+|.|+|+ |. .+|||.+.+..+
T Consensus 13 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~~~-- 83 (95)
T 1frr_A 13 FTLDVPE-GTTILDAAEEAG------YDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESD-- 83 (95)
T ss_dssp EEEEECT-TCCHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSC--
T ss_pred EEEEeCC-CCcHHHHHHHcC------CCCCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEECCC--
Confidence 4455666 899999999875 45778999999999999987 74 589999998753
Q ss_pred ceEEee
Q 026956 130 ASTITP 135 (230)
Q Consensus 130 ~itIEP 135 (230)
++|+-
T Consensus 84 -~~v~~ 88 (95)
T 1frr_A 84 -LVIET 88 (95)
T ss_dssp -EEEEC
T ss_pred -EEEEE
Confidence 66664
No 20
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=98.75 E-value=1.7e-08 Score=75.85 Aligned_cols=57 Identities=28% Similarity=0.513 Sum_probs=46.0
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-----------------eeccccccccCCCCc
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-----------------NGLACLTKISPSGSA 130 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~~ 130 (230)
++++++ +.|||++|+..+ +...++|+.|.||+|.|+| +|. .+|||.+.+..+
T Consensus 17 ~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaC~~~~~~d--- 86 (98)
T 1frd_A 17 TIEIDE-ETTILDGAEENG------IELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRSN--- 86 (98)
T ss_dssp EEEEET-TSCHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEEGGGCEESSS---
T ss_pred EEEeCC-CCcHHHHHHHcC------CCcccCCCCCCCCCCEEEEEeCCccccccccCCHHHhhCCcEEEeECEECCC---
Confidence 455556 899999999875 4577999999999999998 786 689999998743
Q ss_pred eEEee
Q 026956 131 STITP 135 (230)
Q Consensus 131 itIEP 135 (230)
++|+-
T Consensus 87 ~~v~~ 91 (98)
T 1frd_A 87 CTIKT 91 (98)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 67763
No 21
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=98.73 E-value=2.6e-08 Score=74.90 Aligned_cols=57 Identities=25% Similarity=0.415 Sum_probs=44.7
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-------------------eeccccccccCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-------------------NGLACLTKISPS 127 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-------------------~~LAC~t~v~~~ 127 (230)
+++++.+ +.|||++|+..+ +.+.++|+.|.||+|.|+| +|. .+|||++.+..+
T Consensus 17 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d 89 (98)
T 1jq4_A 17 LRFECRS-DEDVITAALRQN------IFLMSSCREGGCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKTD 89 (98)
T ss_dssp EEEEEES-CCTHHHHHHHHT------CCCCCSCCSSCCCCCCBCEEECCCCCCCSCTTTSCHHHHHHHCBCTTTCCSSCC
T ss_pred EEEEeCC-CChHHHHHHHcC------CCCcCCCCCCCCCCCEEEEEcCccccCcccccccCHHHhcCCcEEEeeCEECCC
Confidence 4455556 899999999864 4478999999999999987 784 378999888643
Q ss_pred CCceEEe
Q 026956 128 GSASTIT 134 (230)
Q Consensus 128 ~~~itIE 134 (230)
++|+
T Consensus 90 ---~~v~ 93 (98)
T 1jq4_A 90 ---LEIE 93 (98)
T ss_dssp ---SEEE
T ss_pred ---EEEE
Confidence 6665
No 22
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=98.72 E-value=2.1e-08 Score=74.96 Aligned_cols=58 Identities=33% Similarity=0.496 Sum_probs=46.1
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-----------------eeccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-----------------NGLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~ 129 (230)
+++++++ +.|||++|+..+ +...++|+.|.||+|.|+| +|. .+|+|.+.+..+
T Consensus 12 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d-- 82 (94)
T 1awd_A 12 ETIECPE-DTYILDAAEEAG------LDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSD-- 82 (94)
T ss_dssp EEEECCT-TSCHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSC--
T ss_pred EEEEECC-CCcHHHHHHHcC------CCCCcCCCCCcCCCCEEEEEeCCcCccccccCCHHHHhCCcEEeeECEECCC--
Confidence 4566666 899999999975 4578999999999999997 885 478999888642
Q ss_pred ceEEee
Q 026956 130 ASTITP 135 (230)
Q Consensus 130 ~itIEP 135 (230)
++|+-
T Consensus 83 -~~i~~ 87 (94)
T 1awd_A 83 -VTILT 87 (94)
T ss_dssp -EEEEC
T ss_pred -EEEEe
Confidence 66653
No 23
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=98.72 E-value=2.2e-08 Score=75.37 Aligned_cols=58 Identities=29% Similarity=0.468 Sum_probs=46.1
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-----------------eeccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-----------------NGLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~ 129 (230)
+++++++ +.|||++|+..+ +...++|+.|.||+|.|+| +|. .+|+|.+.+..+
T Consensus 14 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d-- 84 (97)
T 1a70_A 14 VEFQCPD-DVYILDAAEEEG------IDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSD-- 84 (97)
T ss_dssp EEEEEET-TSCHHHHHHHTT------CCCCCSSSSSCSSTTEEEEEESCEECTTCCSSCHHHHHHTEEEGGGCEESSC--
T ss_pred EEEEeCC-CCcHHHHHHHcC------CCcccCCCCcCCCCCeEEEccCCcCccccccCCHHHhhCCeEEEeECEECCC--
Confidence 4556666 899999999964 3478999999999999997 885 388999988643
Q ss_pred ceEEee
Q 026956 130 ASTITP 135 (230)
Q Consensus 130 ~itIEP 135 (230)
++|+-
T Consensus 85 -~~v~~ 89 (97)
T 1a70_A 85 -VTIET 89 (97)
T ss_dssp -EEEEC
T ss_pred -EEEEe
Confidence 67763
No 24
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=98.70 E-value=2.5e-08 Score=75.19 Aligned_cols=58 Identities=28% Similarity=0.473 Sum_probs=45.4
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCee-----------------eccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGCN-----------------GLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~~-----------------~LAC~t~v~~~~~ 129 (230)
+++++++ +.|||++|+..+ +...++|+.|.||+|.|+| +|.+ +|+|++.+..+
T Consensus 14 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d-- 84 (98)
T 1iue_A 14 KKIECNE-DEYILDASERQN------VELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTCYPKSD-- 84 (98)
T ss_dssp EEEEEET-TSCHHHHHHHTT------CCCCCSSCSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSC--
T ss_pred EEEEeCC-CCcHHHHHHHcC------CCCCCCCCCCcCCCCEEEEeeCCccccccccCCHHHHhCCeEEEeECEECCC--
Confidence 4455556 899999999975 3578999999999999986 8853 78999888642
Q ss_pred ceEEee
Q 026956 130 ASTITP 135 (230)
Q Consensus 130 ~itIEP 135 (230)
++|+-
T Consensus 85 -~~i~~ 89 (98)
T 1iue_A 85 -CVIET 89 (98)
T ss_dssp -EEEEC
T ss_pred -eEEEe
Confidence 66653
No 25
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=98.64 E-value=5.3e-08 Score=73.29 Aligned_cols=58 Identities=28% Similarity=0.523 Sum_probs=45.4
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-----------------eeccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-----------------NGLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~ 129 (230)
.++++.+ +.|||++|+..+ +.+.++|+.|.||+|.|+| +|. .+|||++.+..+
T Consensus 16 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d-- 86 (98)
T 1czp_A 16 HEIEVPD-DEYILDAAEEQG------YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD-- 86 (98)
T ss_dssp EEEEEET-TSCHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSC--
T ss_pred EEEEeCC-CCCHHHHHHHcC------CCccCCCCCCCCCCCeEEEccCCcCccccccCCHHHhhCCeEEeeeCEECCC--
Confidence 3455556 899999999864 4578999999999999986 785 478999988643
Q ss_pred ceEEee
Q 026956 130 ASTITP 135 (230)
Q Consensus 130 ~itIEP 135 (230)
++|+-
T Consensus 87 -~~v~~ 91 (98)
T 1czp_A 87 -VVIQT 91 (98)
T ss_dssp -EEEEC
T ss_pred -EEEEe
Confidence 66663
No 26
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.55 E-value=1.3e-07 Score=70.59 Aligned_cols=56 Identities=21% Similarity=0.479 Sum_probs=43.7
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe-----------------eeccccccccCCCC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC-----------------NGLACLTKISPSGS 129 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~ 129 (230)
+++++++ +.|||++|+..+ . ..++|+.|.||+|.|+| +|. .+|+|.+.+..+
T Consensus 13 ~~~~~~~-g~tlL~a~~~~g-~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d-- 82 (93)
T 1wri_A 13 ITFDVEP-GERLIDIGSEKA-D------LPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESD-- 82 (93)
T ss_dssp EEEEECT-TSCHHHHHHHHS-C------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSC--
T ss_pred EEEEECC-CCcHHHHHHHCc-C------CCCCCCCCCCCCCEEEEecCccCccccccCCHHHHhCCcEEeeeCEECCC--
Confidence 5566666 899999999974 2 56899999999999997 784 278888887642
Q ss_pred ceEEe
Q 026956 130 ASTIT 134 (230)
Q Consensus 130 ~itIE 134 (230)
++|+
T Consensus 83 -~~v~ 86 (93)
T 1wri_A 83 -VVIE 86 (93)
T ss_dssp -EEEE
T ss_pred -EEEE
Confidence 6666
No 27
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=98.43 E-value=1.2e-07 Score=99.84 Aligned_cols=68 Identities=22% Similarity=0.378 Sum_probs=55.7
Q ss_pred EEEEEe-ecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe------CC----eeecccccccc--CCCCceE
Q 026956 66 KEFEIN-LKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI------DG----CNGLACLTKIS--PSGSAST 132 (230)
Q Consensus 66 ~~y~v~-v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I------NG----~~~LAC~t~v~--~~~~~it 132 (230)
+.++++ +++ ++|||+.||.-. ++. +.+.||.+|-||+|+|+| +| +++.||.+++- +|..++|
T Consensus 17 ~~v~~~~~~p-~~tLl~~LR~~~-~lt---GTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~g~~v~T 91 (1335)
T 3zyv_A 17 KKVTERNADP-EVNLLFYLRKVI-RLT---GTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLHGAAVTT 91 (1335)
T ss_dssp EEEEESSCCT-TCBHHHHHHHTT-CCT---TSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEEC
T ss_pred EEEEeCCCCc-CccHHHHHhccC-CCc---ccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhcCCEEEe
Confidence 345554 455 899999999854 555 699999999999999997 44 37999999997 5778999
Q ss_pred EeeCCC
Q 026956 133 ITPLPH 138 (230)
Q Consensus 133 IEPL~~ 138 (230)
||+|.+
T Consensus 92 vEglg~ 97 (1335)
T 3zyv_A 92 VEGIGS 97 (1335)
T ss_dssp HHHHCC
T ss_pred eCCCCC
Confidence 999975
No 28
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=98.35 E-value=5e-07 Score=67.49 Aligned_cols=55 Identities=18% Similarity=0.431 Sum_probs=42.5
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEeC-Ce------------------eecccccccc
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNID-GC------------------NGLACLTKIS 125 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~IN-G~------------------~~LAC~t~v~ 125 (230)
+.+++++.+ +.|||++|+..+ .+ +..++|+ .|.||+|.|+|. |+ .+|||++.+.
T Consensus 10 ~~~~~~~~~-g~tll~a~~~~g--i~---gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq~~~~ 83 (93)
T 1l5p_A 10 VKKQLKFED-DQTLFTVLTEAG--LM---SADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACAITLS 83 (93)
T ss_dssp EEEEEECCT-TEEHHHHHHTTT--SS---CCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGGCEEC
T ss_pred cEEEEEECC-CChHHHHHHHcC--CC---cCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeECEEC
Confidence 345677767 899999999864 22 3788999 999999999874 53 2789998886
Q ss_pred C
Q 026956 126 P 126 (230)
Q Consensus 126 ~ 126 (230)
.
T Consensus 84 ~ 84 (93)
T 1l5p_A 84 G 84 (93)
T ss_dssp G
T ss_pred C
Confidence 3
No 29
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=98.30 E-value=8e-07 Score=67.23 Aligned_cols=60 Identities=18% Similarity=0.361 Sum_probs=43.7
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEeCCe-------------------------eecccc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNIDGC-------------------------NGLACL 121 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~ING~-------------------------~~LAC~ 121 (230)
+++++.+ +.|||++|+..+ +...++|+ .|.||+|.|+|.+- .+|||+
T Consensus 16 ~~~~~~~-g~tlL~a~~~~g------i~i~~~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~E~~~L~~~~~~~~g~rLaCq 88 (103)
T 2wlb_A 16 IMIEGNE-GDSILDLAHANN------IDLEGACEGSVACSTCHVIVDPEHYELLDPPEEDEEDMLDLAFGLEETSRLGCQ 88 (103)
T ss_dssp EEEEECT-TCBHHHHHHHTT------CCCCCTTTTSSCCSTTEEEECHHHHHHSCCCCHHHHHHHTTBTTCCTTEEEGGG
T ss_pred EEEEECC-CCHHHHHHHHcC------CCcCcCCCCCCCcCCCEEEECCCchhccCCCCHHHHHHHhcccCCCCCcEeeEe
Confidence 4456666 899999999864 34678999 79999999987652 278888
Q ss_pred ccccCCCCceEEe
Q 026956 122 TKISPSGSASTIT 134 (230)
Q Consensus 122 t~v~~~~~~itIE 134 (230)
+.+..+-+.++|+
T Consensus 89 ~~~~~d~~~l~v~ 101 (103)
T 2wlb_A 89 VLLRKDLDGIRVR 101 (103)
T ss_dssp CBCCGGGTTEEEE
T ss_pred eEeCCCCCcEEEE
Confidence 8876322236665
No 30
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=98.22 E-value=1.8e-06 Score=68.71 Aligned_cols=57 Identities=26% Similarity=0.548 Sum_probs=41.8
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCe------------------eeccccccccCCCC
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGC------------------NGLACLTKISPSGS 129 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~------------------~~LAC~t~v~~~~~ 129 (230)
++++.+ +.|||++|+..+ +...++|+.|.||+|.|+| .|. .+|+|++.+..+
T Consensus 39 ~v~v~~-g~tlL~aa~~~G------i~i~~~C~~G~CgtC~v~v~~G~v~~~e~~~L~~~e~~~~g~rLaCq~~~~~d-- 109 (128)
T 1doi_A 39 SLEVNE-GEYILEAAEAQG------YDWPFSCRAGACANCAAIVLEGDIDMDMQQILSDEEVEDKNVRLTCIGSPDAD-- 109 (128)
T ss_dssp EEECCT-TSCHHHHHHHTT------CCCCCSSSSSSSSTTEEEEEESCEEECCCSSSCHHHHHTSCEEEGGGEEECSS--
T ss_pred EEEECC-CCcHHHHHHHcC------CCCccCCCccCCCCCEeEEecCCcCchhhccCCHhHhccCCEEEEEEeEEcCC--
Confidence 445556 899999999875 4577899999999999986 663 367777776532
Q ss_pred ceEEe
Q 026956 130 ASTIT 134 (230)
Q Consensus 130 ~itIE 134 (230)
.++|+
T Consensus 110 ~i~i~ 114 (128)
T 1doi_A 110 EVKIV 114 (128)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 35553
No 31
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=98.18 E-value=2e-06 Score=76.50 Aligned_cols=52 Identities=29% Similarity=0.525 Sum_probs=42.2
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe-CCee---------------------ecccccccc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI-DGCN---------------------GLACLTKIS 125 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I-NG~~---------------------~LAC~t~v~ 125 (230)
+++++.+ +.||||+++..+ +...++|+.|.||+|.|+| +|.. +|||++.+.
T Consensus 16 ~~~~~~~-g~tll~a~~~~g------i~i~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~l~~~~~~~g~~LaCq~~~~ 88 (338)
T 1krh_A 16 RFICIAQ-GETLSDAAYRQQ------INIPMDCREGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPT 88 (338)
T ss_dssp EEEEECT-TCCHHHHHHHTT------CCCSCSCSSSSSCTTEEEEEECCEECCGGGSCTTTCCHHHHHHTEEETTTCEES
T ss_pred EEEEeCC-CCcHHHHHHHcC------CCcccCCCCcCCCCCEEEEecCcEecccCccccccCCHHHHhCCeEEEEeCEEC
Confidence 4456666 899999999875 3477899999999999987 7843 789999886
Q ss_pred C
Q 026956 126 P 126 (230)
Q Consensus 126 ~ 126 (230)
.
T Consensus 89 ~ 89 (338)
T 1krh_A 89 S 89 (338)
T ss_dssp S
T ss_pred C
Confidence 4
No 32
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=98.10 E-value=5.2e-06 Score=63.79 Aligned_cols=57 Identities=19% Similarity=0.447 Sum_probs=42.5
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEe-CCe-----------------------eecccccc
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNI-DGC-----------------------NGLACLTK 123 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~I-NG~-----------------------~~LAC~t~ 123 (230)
++++.+ +.|||++++..+ +...++|+ .|.||+|.|+| .|. .+|||++.
T Consensus 18 ~v~~~~-g~tlL~aa~~~G------i~i~~~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~ 90 (113)
T 3ah7_A 18 TVEVKP-GTNILELAHDHH------IEMESACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQVF 90 (113)
T ss_dssp EEECCT-TCBHHHHHHHTT------CCCCCTTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGCB
T ss_pred EEEECC-CCcHHHHHHHcC------CCCCcCCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeCE
Confidence 455556 899999999875 34678998 69999999986 463 26899998
Q ss_pred ccCCCCceEEe
Q 026956 124 ISPSGSASTIT 134 (230)
Q Consensus 124 v~~~~~~itIE 134 (230)
+... .++|+
T Consensus 91 ~~~~--dl~v~ 99 (113)
T 3ah7_A 91 VADE--DLTIE 99 (113)
T ss_dssp CCSS--CEEEE
T ss_pred EeCC--CEEEE
Confidence 8622 36776
No 33
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=98.09 E-value=6.3e-06 Score=62.84 Aligned_cols=60 Identities=18% Similarity=0.385 Sum_probs=43.3
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccc--cCcCC-CccCcceEEeC-C------------------------eeecc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFR--RSCRE-GICGSCAMNID-G------------------------CNGLA 119 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr--~gCr~-GiCGsCaV~IN-G------------------------~~~LA 119 (230)
+++++.+ +.|||++++..+ +... ++|+. |.||+|.|+|. | -.+||
T Consensus 19 ~~v~~~~-g~tLL~aa~~~g------i~i~~~~~Cgg~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLa 91 (108)
T 2bt6_A 19 LTTKGKI-GDSLLDVVVQNN------LDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLTDRSRLG 91 (108)
T ss_dssp EEEEEET-TCBHHHHHHHTT------CCCTTTTTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCTTCCTTEEEG
T ss_pred EEEEECC-CChHHHHHHHcC------CCCCcccCCCCCcCcCCCEEEECccccccCCCCCHHHHHHHhCcccCCCCcEee
Confidence 4566666 899999999865 2245 89986 99999999876 3 13689
Q ss_pred ccccccCCCCceEEe
Q 026956 120 CLTKISPSGSASTIT 134 (230)
Q Consensus 120 C~t~v~~~~~~itIE 134 (230)
|++.+...-+.++|+
T Consensus 92 Cq~~~~~d~d~~~V~ 106 (108)
T 2bt6_A 92 CQICLTKAMDNMTVR 106 (108)
T ss_dssp GGCBCCGGGTTEEEE
T ss_pred EEEEecCCCCCEEEE
Confidence 998886422236665
No 34
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=98.07 E-value=4.6e-06 Score=63.97 Aligned_cols=57 Identities=18% Similarity=0.524 Sum_probs=41.7
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCc-CCCccCcceEEeC-Ce-----------------------eecccccc
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSC-REGICGSCAMNID-GC-----------------------NGLACLTK 123 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gC-r~GiCGsCaV~IN-G~-----------------------~~LAC~t~ 123 (230)
++++.+ +.|||++|+..+ +...++| +.|.||+|.|+|. |. .+|||++.
T Consensus 18 ~~~~~~-g~tlL~a~~~~g------i~i~~~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~ 90 (111)
T 1i7h_A 18 VLEANS-GETILDAALRNG------IEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQAR 90 (111)
T ss_dssp EEECCT-TCBHHHHHHHTT------CCCCCTTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTCB
T ss_pred EEEeCC-CCcHHHHHHHcC------CCCcccCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEEE
Confidence 345556 899999999874 3467899 5899999999864 52 37888888
Q ss_pred ccCCCCceEEe
Q 026956 124 ISPSGSASTIT 134 (230)
Q Consensus 124 v~~~~~~itIE 134 (230)
+..+ .++|+
T Consensus 91 ~~~~--dl~v~ 99 (111)
T 1i7h_A 91 VTDE--DLVVE 99 (111)
T ss_dssp CCSS--CEEEE
T ss_pred EeCC--CEEEE
Confidence 7421 35665
No 35
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=98.01 E-value=7.8e-06 Score=62.02 Aligned_cols=60 Identities=15% Similarity=0.427 Sum_probs=42.9
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcc-cccCcC-CCccCcceEEe-CC---------------------e----eecc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLT-FRRSCR-EGICGSCAMNI-DG---------------------C----NGLA 119 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~-fr~gCr-~GiCGsCaV~I-NG---------------------~----~~LA 119 (230)
.++++.+ +.|||++++..+ +. ..++|+ .|.||+|.|+| +| . .+||
T Consensus 13 ~~~~~~~-g~tlLeaa~~~g------i~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1xlq_A 13 RELDVAD-GVSLMQAAVSNG------IYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLC 85 (106)
T ss_dssp EEEECCT-TCBHHHHHHHTT------CTTSCCTTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEG
T ss_pred EEEEECC-CCcHHHHHHHcC------CCCCCcCCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 4566666 899999999875 23 678996 89999999975 45 1 2678
Q ss_pred ccccccCCCCceEEe
Q 026956 120 CLTKISPSGSASTIT 134 (230)
Q Consensus 120 C~t~v~~~~~~itIE 134 (230)
|++.+...-+.++|+
T Consensus 86 Cq~~~~~d~~~l~v~ 100 (106)
T 1xlq_A 86 CQIIMTPELDGIVVD 100 (106)
T ss_dssp GGCBCCGGGTTEEEE
T ss_pred eeeEeecCCCCEEEE
Confidence 888876421236665
No 36
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=97.98 E-value=1.2e-05 Score=71.41 Aligned_cols=40 Identities=25% Similarity=0.570 Sum_probs=31.8
Q ss_pred EeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEE-eCCee
Q 026956 70 INLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMN-IDGCN 116 (230)
Q Consensus 70 v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~-ING~~ 116 (230)
+++.+ +.||||+|+..+ +...++|+.|.||+|.++ +.|..
T Consensus 249 ~~~~~-~~~ll~a~~~~g------~~~~~~C~~G~Cg~C~~~v~~G~~ 289 (321)
T 2pia_A 249 FEIPA-NRSILEVLRDAN------VRVPSSCESGTCGSCKTALCSGEA 289 (321)
T ss_dssp EEECT-TSCHHHHHHHTT------CCCCCSCSSSSSCTTEEEEEESCE
T ss_pred EEECC-CCcHHHHHHHcC------CCCCCCCCCCCCCCCEEEEecCcc
Confidence 34445 889999999875 457899999999999997 46754
No 37
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.97 E-value=1e-05 Score=61.76 Aligned_cols=41 Identities=24% Similarity=0.438 Sum_probs=32.2
Q ss_pred EEEEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEeC
Q 026956 67 EFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNID 113 (230)
Q Consensus 67 ~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~IN 113 (230)
.+++++.+ +.|||++|+..+ .+ +..++|+ .|.||+|.|+|.
T Consensus 12 ~~~~~~~~-g~tll~a~~~~g--i~---~i~~~C~G~G~CgtC~v~v~ 53 (104)
T 3lxf_A 12 RTEIQAEP-GLSLMEALRDAG--ID---ELLALCGGCCSCATCHVLVA 53 (104)
T ss_dssp EEEEECCT-TSBHHHHHHHTT--CT---TCCCTTCSSSSCSTTEEEEC
T ss_pred EEEEEECC-CChHHHHHHHcC--CC---CCCcCCCCCCCCCCCEEEEC
Confidence 45677766 899999999864 22 2668999 899999999764
No 38
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=97.97 E-value=5.6e-06 Score=62.74 Aligned_cols=60 Identities=17% Similarity=0.496 Sum_probs=43.6
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcc-cccCcC-CCccCcceEEeC-C------e-------------------eecc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLT-FRRSCR-EGICGSCAMNID-G------C-------------------NGLA 119 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~-fr~gCr-~GiCGsCaV~IN-G------~-------------------~~LA 119 (230)
.++++.+ +.|||++++..+ +. ..++|+ .|.||+|.|+|. | . .+||
T Consensus 13 ~~~~~~~-g~tlL~aa~~~g------i~~i~~~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (105)
T 1b9r_A 13 YAVDAQD-GQSLMEVATQNG------VPGIVAECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLS 85 (105)
T ss_dssp EEEECCT-TCCTTHHHHHHT------CCCCCCSSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCG
T ss_pred EEEEECC-CChHHHHHHHcC------CCCcCcCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 4456666 899999999875 23 678999 699999999864 4 0 3678
Q ss_pred ccccccCCCCceEEe
Q 026956 120 CLTKISPSGSASTIT 134 (230)
Q Consensus 120 C~t~v~~~~~~itIE 134 (230)
|++.+...-+.++|+
T Consensus 86 Cq~~~~~~~~~l~v~ 100 (105)
T 1b9r_A 86 CQVFIDPSMDGLIVR 100 (105)
T ss_dssp GGCCCCTTSTTEEEE
T ss_pred eeCEecCCCCcEEEE
Confidence 988886432246665
No 39
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=97.96 E-value=8.8e-06 Score=62.19 Aligned_cols=60 Identities=17% Similarity=0.391 Sum_probs=43.1
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCC-CccCcceEEeC-Ce------------------------eecccc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCRE-GICGSCAMNID-GC------------------------NGLACL 121 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~-GiCGsCaV~IN-G~------------------------~~LAC~ 121 (230)
+++++.+ +.|||++++..+ +...++|+. |.||+|.|+|. |. .+|||+
T Consensus 18 ~~~~~~~-g~tlL~aa~~~g------i~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLaCq 90 (109)
T 2y5c_A 18 IPVSGRV-GDNVLHLAQRHG------VDLEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQENSRLGCQ 90 (109)
T ss_dssp EEEEEET-TCBHHHHHHHTT------CCCCCTTSSSSSCCTTEEEECHHHHTTSCCCCHHHHHHHHTSTTCCTTEEEGGG
T ss_pred EEEEECC-CCcHHHHHHHcC------CCCCcCCCCCcCcCccEEEECCcchhhcCCCCHHHHHHHhccccCCCCcEeeEE
Confidence 4555666 899999999865 336689987 99999999863 41 368999
Q ss_pred ccccCCCCceEEe
Q 026956 122 TKISPSGSASTIT 134 (230)
Q Consensus 122 t~v~~~~~~itIE 134 (230)
+.+..+-+.++|+
T Consensus 91 ~~~~~d~~~~~v~ 103 (109)
T 2y5c_A 91 IVLTPELEGAEFT 103 (109)
T ss_dssp CBCCGGGTTCEEE
T ss_pred eEEecCCCeEEEE
Confidence 9886422235665
No 40
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.94 E-value=1.1e-05 Score=61.27 Aligned_cols=60 Identities=20% Similarity=0.399 Sum_probs=42.9
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcc-cccCcC-CCccCcceEEeC-C---------------------e----eecc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLT-FRRSCR-EGICGSCAMNID-G---------------------C----NGLA 119 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~-fr~gCr-~GiCGsCaV~IN-G---------------------~----~~LA 119 (230)
.++++.+ +.|||++++..+ +. ..++|+ .|.||+|.|+|. | + .+||
T Consensus 13 ~~~~~~~-g~tlL~aa~~~g------i~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1uwm_A 13 HEVEAKP-GLTVMEAARDNG------VPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLT 85 (106)
T ss_dssp EEEECCT-TSBHHHHHHTTT------CTTCCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEG
T ss_pred EEEEECC-CCcHHHHHHHcC------CCCcccCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEec
Confidence 4556666 899999999875 33 678995 899999999864 3 1 3678
Q ss_pred ccccccCCCCceEEe
Q 026956 120 CLTKISPSGSASTIT 134 (230)
Q Consensus 120 C~t~v~~~~~~itIE 134 (230)
|++.+...-+.++|+
T Consensus 86 Cq~~~~~d~~~l~v~ 100 (106)
T 1uwm_A 86 CQIKVTSLLDGLVVH 100 (106)
T ss_dssp GGCBCCGGGTTEEEE
T ss_pred ccCEEccCCCCEEEE
Confidence 888876421236665
No 41
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.79 E-value=2.4e-05 Score=62.11 Aligned_cols=61 Identities=25% Similarity=0.495 Sum_probs=42.9
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEeC-Ce------------------------eecccc
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNID-GC------------------------NGLACL 121 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~IN-G~------------------------~~LAC~ 121 (230)
.++++.+ +.|||++|+..+ .+ +..++|+ .|.||+|.|+|. |. .+|||+
T Consensus 34 ~~v~~~~-G~tLL~aa~~~g--i~---gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~~g~RLaCQ 107 (126)
T 3hui_A 34 RTVEVEE-GATVMEAAIRNA--IP---GVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRPNSRLSCQ 107 (126)
T ss_dssp EEEEEET-TSBHHHHHHTTT--CT---TCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCCTTEEEGGG
T ss_pred EEEEECC-CCcHHHHHHHcC--CC---CCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhccCCeEEeee
Confidence 4556666 899999999864 22 2668998 899999999864 41 268888
Q ss_pred ccccCCCCceEEe
Q 026956 122 TKISPSGSASTIT 134 (230)
Q Consensus 122 t~v~~~~~~itIE 134 (230)
+.+..+-+.++|+
T Consensus 108 ~~~~~dldgl~V~ 120 (126)
T 3hui_A 108 IKVSNELDGLIVT 120 (126)
T ss_dssp CBCCGGGTTEEEE
T ss_pred CEECcCCCcEEEE
Confidence 8886321235665
No 42
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=97.33 E-value=5.2e-05 Score=59.93 Aligned_cols=39 Identities=21% Similarity=0.491 Sum_probs=12.1
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccc--cCcC-CCccCcceEEeC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFR--RSCR-EGICGSCAMNID 113 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr--~gCr-~GiCGsCaV~IN 113 (230)
+++++.+ |.|||++++..+ +... +.|+ .|.||+|.|.|.
T Consensus 18 ~~v~~~~-G~tLl~aa~~~g------i~i~g~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 18 LTTKGKV-GDSLLDVVVENN------LDIDGFGACEGTLACSTCHLIFE 59 (123)
T ss_dssp --------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEECC-CCcHHHHHHHcC------CCCCcCCCCCCCCEeCCCeeEEe
Confidence 5566666 899999999865 2244 7898 799999999875
No 43
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=97.12 E-value=0.00052 Score=67.57 Aligned_cols=57 Identities=26% Similarity=0.504 Sum_probs=43.3
Q ss_pred EeecCCChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEe-CCe-----------------eeccccccccCCCCc
Q 026956 70 INLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNI-DGC-----------------NGLACLTKISPSGSA 130 (230)
Q Consensus 70 v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~I-NG~-----------------~~LAC~t~v~~~~~~ 130 (230)
+++.+ +.|||++++..+ +...++|+ .|.||+|.|+| .|. .+|+|++.+..+
T Consensus 15 v~v~~-G~tLLeAa~~aG------i~ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls~~e~~~G~rLaCqa~~~sD--- 84 (631)
T 3zyy_X 15 VAISE-NTNLMEALNLAG------INIKTVCGGAGTCGKCLVRVVDGQKRVESYGKLKQEEIAQGYVLACQTYPESD--- 84 (631)
T ss_dssp EEECT-TSCHHHHHHHHT------CCCCCSCCCSSCCSTTEEEEEESCEEESCCTTCCHHHHHTTEEETTTEEECSS---
T ss_pred EEECC-CCcHHHHHHHcC------CCCCcCCCCCCcCCCCEEEEeeCcccccccccCCHHHhcCCcEEeeeCEECCC---
Confidence 44446 889999999975 34779999 89999999975 443 489999988632
Q ss_pred eEEeeC
Q 026956 131 STITPL 136 (230)
Q Consensus 131 itIEPL 136 (230)
++|+--
T Consensus 85 l~Ielp 90 (631)
T 3zyy_X 85 LIIEIP 90 (631)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 666643
No 44
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.78 E-value=0.059 Score=50.16 Aligned_cols=56 Identities=29% Similarity=0.287 Sum_probs=37.9
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcC-CCc--cCcceEEeCCee-eccccccccCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCR-EGI--CGSCAMNIDGCN-GLACLTKISPS 127 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr-~Gi--CGsCaV~ING~~-~LAC~t~v~~~ 127 (230)
++++++ + +.||+++|....- +.+++...-+ .|. ||+|.|.|||.+ +.+|.+.+.+|
T Consensus 23 ~~~~~~--~-g~ti~~a~~~~g~---~~~~~~~~~~p~g~~~~~~c~v~v~g~~~~~ac~~~v~~G 82 (493)
T 1y56_A 23 KELEAY--E-GEKLPVALLANEI---YWLTTSNEGRKRGAFTFGPVPMTVNGVKGLEARRIKVKDG 82 (493)
T ss_dssp EEEEEE--T-TCBHHHHHHHTTC---CCCEECTTSCEECSSSSSCCEEBSSSCTTEEGGGCBCCTT
T ss_pred EEEEec--C-CCHHHHHHHHCCC---ceecCCCCCCCCccccceEEEEEECCEecccceeEEcccC
Confidence 445554 5 8899999997642 3333211001 234 789999999987 78999999865
No 45
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=90.67 E-value=0.02 Score=45.76 Aligned_cols=17 Identities=41% Similarity=1.288 Sum_probs=15.1
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 50 ~~~Ci~C~~C~~~CP~~ 66 (182)
T 3i9v_9 50 LEKCIGCSLCAAACPAY 66 (182)
T ss_dssp CBSCCCCCHHHHHCTTC
T ss_pred CccCcccccchhhCCcc
Confidence 45899999999999975
No 46
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=88.77 E-value=0.11 Score=52.38 Aligned_cols=37 Identities=11% Similarity=0.009 Sum_probs=23.2
Q ss_pred CCCccCcceEEeCCeeeccccccccCCCCceEEeeCC
Q 026956 101 REGICGSCAMNIDGCNGLACLTKISPSGSASTITPLP 137 (230)
Q Consensus 101 r~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL~ 137 (230)
..|.|+.|.|.+|+...-+...-...+-.+++..|..
T Consensus 310 ~tGa~dv~vV~~n~i~~~ll~~a~~~Gm~Vit~sp~~ 346 (807)
T 3cf4_A 310 RSGMPDVIVVDEQCVRGDIVPEAQKLKIPVIASNPKI 346 (807)
T ss_dssp HHTCCSEEEECSSSCCTTHHHHHHHTTCCEEECSTTC
T ss_pred hcCCCeEEEEEecCCChHHHHHHHHCCCEEEEechhh
Confidence 3789999999999973211111113455677777765
No 47
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=87.49 E-value=0.082 Score=37.10 Aligned_cols=17 Identities=29% Similarity=0.864 Sum_probs=14.2
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 8 ~~~CigCg~C~~~CP~~ 24 (81)
T 1iqz_A 8 KETCIACGACGAAAPDI 24 (81)
T ss_dssp TTTCCCCSHHHHHCTTT
T ss_pred cccCcccChhhHhCchh
Confidence 45899999999999943
No 48
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=87.34 E-value=0.11 Score=35.70 Aligned_cols=18 Identities=33% Similarity=1.021 Sum_probs=15.5
Q ss_pred HHHhhhhchhhhcccCcc
Q 026956 189 MYECILCACCSTSCPSYW 206 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~~ 206 (230)
...|+.||.|+.+||...
T Consensus 44 ~~~C~~Cg~C~~~CP~~a 61 (80)
T 1jb0_C 44 TEDCVGCKRCETACPTDF 61 (80)
T ss_dssp GGGCCCCCHHHHHCCSSS
T ss_pred CCcCcCcCChhhhCCCCc
Confidence 358999999999999853
No 49
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=87.27 E-value=0.096 Score=33.96 Aligned_cols=16 Identities=31% Similarity=1.078 Sum_probs=14.3
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|+.+||..
T Consensus 6 ~~C~~C~~C~~~CP~~ 21 (58)
T 1f2g_A 6 DDCMACEACVEICPDV 21 (58)
T ss_dssp TTCCCCCHHHHHCTTT
T ss_pred CcCccchHHHHhCCcc
Confidence 5799999999999974
No 50
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=87.19 E-value=0.082 Score=35.09 Aligned_cols=16 Identities=38% Similarity=0.891 Sum_probs=13.8
Q ss_pred HHHhhhhchhhhcccC
Q 026956 189 MYECILCACCSTSCPS 204 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~ 204 (230)
...||.||.|+.+||.
T Consensus 8 ~~~C~~Cg~C~~~CP~ 23 (64)
T 1dax_A 8 QDECIACESCVEIAPG 23 (64)
T ss_dssp STTCCSCCHHHHHCTT
T ss_pred cccCCCchHHHHhCCc
Confidence 3579999999999994
No 51
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=86.85 E-value=0.31 Score=41.30 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=21.6
Q ss_pred cccccCcCCCccCcceEEeC-C--eeeccccc
Q 026956 94 LTFRRSCREGICGSCAMNID-G--CNGLACLT 122 (230)
Q Consensus 94 l~fr~gCr~GiCGsCaV~IN-G--~~~LAC~t 122 (230)
+.-+..|+.|+||+|++.+. + ...+.|..
T Consensus 220 ~e~~m~CG~G~C~~C~~~~~~~~~~~~~~C~d 251 (262)
T 1ep3_B 220 MESRMACGIGACYACVEHDKEDESHALKVCED 251 (262)
T ss_dssp CCCCCSSSSSSSCTTEEEETTEEEEEEETTTT
T ss_pred ecccccCcccccccCCcccccCCCceeEEeCC
Confidence 33345899999999999986 2 45678864
No 52
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=86.63 E-value=0.1 Score=37.95 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=15.3
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
+...||.||.|+.+||..
T Consensus 41 d~~~C~~Cg~C~~~CP~~ 58 (103)
T 1xer_A 41 DFDLCIADGSCINACPVN 58 (103)
T ss_dssp ETTTCCCCCHHHHHCTTC
T ss_pred ehhhCCChhhHHHHcCcc
Confidence 345899999999999964
No 53
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.61 E-value=0.72 Score=46.85 Aligned_cols=58 Identities=9% Similarity=-0.022 Sum_probs=42.9
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccC------cCCCccCcceEEeC---C-----eeeccccccccCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRS------CREGICGSCAMNID---G-----CNGLACLTKISPS 127 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~g------Cr~GiCGsCaV~IN---G-----~~~LAC~t~v~~~ 127 (230)
++++.. + +.||+.+|....- .....+|+++ |..|.|..|.|.|| | .++.||.+.+.++
T Consensus 30 ~~~~~~--~-g~tv~~aL~~~Gv-~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~~g~~~~~~~~ac~~~~~~g 101 (965)
T 2gag_A 30 AKLSAF--R-GDTVASALLANGV-RRAGNSLYLDRPRGIFAAGVEEPNALVTVSARHEQDIDESMLPATTVPVTED 101 (965)
T ss_dssp EEEEEE--E-TCBHHHHHHHTTC-CBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCSTTCCCEEEEEGGGCBCCTT
T ss_pred EEEEec--C-CCHHHHHHHHcCC-eEeecCCCCCCCcccccCCccCCceEEEEccCCCCCcCCccccceeeecccc
Confidence 455554 4 7799999998752 2234455432 88999999999999 6 4678999999875
No 54
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=86.53 E-value=0.099 Score=34.46 Aligned_cols=17 Identities=35% Similarity=0.702 Sum_probs=14.4
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 8 ~~~C~~C~~C~~~Cp~~ 24 (66)
T 1sj1_A 8 QDTCIGDAICASLCPDV 24 (66)
T ss_dssp TTTCCCCCHHHHHCTTT
T ss_pred cccCcCchHHHHhCCce
Confidence 35799999999999953
No 55
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=86.50 E-value=0.12 Score=33.44 Aligned_cols=17 Identities=35% Similarity=0.944 Sum_probs=14.6
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 7 ~~~C~~C~~C~~~Cp~~ 23 (60)
T 1rof_A 7 ADACIGCGVCENLCPDV 23 (60)
T ss_dssp TTTCCSCCSSTTTCTTT
T ss_pred hhhCCCChHHHHhCcHH
Confidence 35799999999999964
No 56
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=86.13 E-value=0.12 Score=41.26 Aligned_cols=17 Identities=41% Similarity=1.214 Sum_probs=15.2
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...|+.||.|+.+||.-
T Consensus 95 ~~~C~~C~~C~~~CP~~ 111 (182)
T 3i9v_9 95 MLRCIFCGLCEEACPTG 111 (182)
T ss_dssp TTTCCCCCHHHHHCSSS
T ss_pred CCcCcChhChhhhCCcc
Confidence 45799999999999987
No 57
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=85.79 E-value=0.14 Score=35.26 Aligned_cols=17 Identities=35% Similarity=0.919 Sum_probs=14.8
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 7 ~~~C~~Cg~C~~~CP~~ 23 (80)
T 1jb0_C 7 YDTCIGCTQCVRACPTD 23 (80)
T ss_dssp ETTCCCCCHHHHHCTTC
T ss_pred CCcCcChhHHHHHCCcc
Confidence 35799999999999964
No 58
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=85.40 E-value=0.16 Score=36.86 Aligned_cols=18 Identities=33% Similarity=0.877 Sum_probs=15.4
Q ss_pred HHHhhhhchhhhcccCcc
Q 026956 189 MYECILCACCSTSCPSYW 206 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~~ 206 (230)
...|+.||.|+.+||...
T Consensus 80 ~~~C~~Cg~C~~~CP~~A 97 (103)
T 1xer_A 80 EQACIFCMACVNVCPVAA 97 (103)
T ss_dssp GGGCCCCCHHHHHCTTCC
T ss_pred cccccChhhHHHhccccc
Confidence 458999999999999853
No 59
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=84.80 E-value=0.2 Score=35.19 Aligned_cols=16 Identities=44% Similarity=1.092 Sum_probs=12.2
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..||.||.|+.+||..
T Consensus 6 ~~C~~C~~C~~~CP~~ 21 (82)
T 3eun_A 6 DECINCDVCEPECPNG 21 (82)
T ss_dssp TTCCCCCTTGGGCTTC
T ss_pred CCCcCccchHHHCChh
Confidence 4688888888888863
No 60
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=84.77 E-value=0.2 Score=32.21 Aligned_cols=16 Identities=38% Similarity=1.080 Sum_probs=14.2
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|+.+||..
T Consensus 6 ~~C~~C~~C~~~CP~~ 21 (55)
T 2fdn_A 6 EACISCGACEPECPVN 21 (55)
T ss_dssp TTCCCCCTTGGGCTTC
T ss_pred ccCcChhhHHHHCCcc
Confidence 4799999999999975
No 61
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=84.76 E-value=0.2 Score=35.01 Aligned_cols=16 Identities=38% Similarity=1.074 Sum_probs=11.7
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|+.+||.-
T Consensus 6 ~~C~~C~~C~~~CP~~ 21 (82)
T 2fgo_A 6 DDCINCDVCEPECPNG 21 (82)
T ss_dssp TTCCCCCTTGGGCTTC
T ss_pred CCCCChhhHHHHCChh
Confidence 4688888888888753
No 62
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=84.59 E-value=0.47 Score=33.42 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=23.9
Q ss_pred HHHhhhhc------hhhhcccC-ccc--CCCCCcCHHHHHHHHHhcccc
Q 026956 189 MYECILCA------CCSTSCPS-YWW--TSEAYLGPAALLHANSIGLSN 228 (230)
Q Consensus 189 ~~~CI~CG------~C~saCP~-~~~--~~~~FlGPaal~~a~R~~~~~ 228 (230)
...|+.|| .|+.+||. -.. .+....-...+...+..+.+|
T Consensus 34 ~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~~~~~~~~~~~~~~~~~l~~~ 82 (85)
T 2zvs_A 34 SDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHA 82 (85)
T ss_dssp GGGCCTTTTTCSSCHHHHHCSSCCEEECTTSCCCHHHHHHHHHHHHCC-
T ss_pred ChhccCCCCcCCccHhhHhCcCCCCEEecCCCCCCHHHHHHHHHhhCcc
Confidence 34899999 99999999 422 222233445555555444443
No 63
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=84.49 E-value=0.23 Score=31.86 Aligned_cols=15 Identities=47% Similarity=1.136 Sum_probs=13.6
Q ss_pred HHhhhhchhhhcccC
Q 026956 190 YECILCACCSTSCPS 204 (230)
Q Consensus 190 ~~CI~CG~C~saCP~ 204 (230)
..|+.||.|+.+||.
T Consensus 7 ~~C~~C~~C~~~Cp~ 21 (59)
T 1dwl_A 7 EECIGCESCVELCPE 21 (59)
T ss_dssp CCCSSCCGGGGTSTT
T ss_pred hhCcChhHHHHHCCH
Confidence 479999999999995
No 64
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=84.37 E-value=0.17 Score=32.62 Aligned_cols=16 Identities=38% Similarity=0.976 Sum_probs=14.4
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|..+||..
T Consensus 35 ~~C~~C~~C~~~CP~~ 50 (55)
T 2fdn_A 35 DTCIDCGACAGVCPVD 50 (55)
T ss_dssp TTCCCCCHHHHTCTTC
T ss_pred ccCcChhChHHHcccc
Confidence 4799999999999985
No 65
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=84.12 E-value=0.2 Score=36.93 Aligned_cols=17 Identities=47% Similarity=1.011 Sum_probs=14.9
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||...
T Consensus 37 ~~C~~Cg~C~~~CP~~a 53 (106)
T 7fd1_A 37 DECIDCALCEPECPAQA 53 (106)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred ccCCChhhhHHhCCChh
Confidence 36999999999999864
No 66
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=84.05 E-value=0.21 Score=35.30 Aligned_cols=17 Identities=35% Similarity=0.991 Sum_probs=14.7
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 5 ~~~C~~C~~C~~~CP~~ 21 (85)
T 2zvs_A 5 TKKCINCDMCEPECPNE 21 (85)
T ss_dssp CTTCCCCCTTTTTCTTC
T ss_pred CCcCcChhHHHHHCchh
Confidence 35799999999999964
No 67
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=83.28 E-value=0.25 Score=34.39 Aligned_cols=16 Identities=31% Similarity=1.024 Sum_probs=13.2
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|+.+||..
T Consensus 6 ~~C~~C~~C~~~CP~~ 21 (80)
T 1rgv_A 6 DDCTACDACVEECPNE 21 (80)
T ss_dssp SCCCCCCTTTTTCTTC
T ss_pred CCCcChhhHHHHcChh
Confidence 4799999999999964
No 68
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=83.00 E-value=0.17 Score=35.01 Aligned_cols=18 Identities=33% Similarity=0.767 Sum_probs=15.4
Q ss_pred HHhhhhchhhhcccCccc
Q 026956 190 YECILCACCSTSCPSYWW 207 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~~ 207 (230)
..|+.||.|+.+||....
T Consensus 37 ~~C~~Cg~C~~~CP~~ai 54 (77)
T 1bc6_A 37 DVCIDCGACEAVCPVSAI 54 (77)
T ss_dssp TTCCSCCSHHHHSGGGSS
T ss_pred ccCcCccCCHhhcCccce
Confidence 379999999999998643
No 69
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=82.45 E-value=0.21 Score=34.71 Aligned_cols=17 Identities=41% Similarity=0.974 Sum_probs=14.9
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||...
T Consensus 37 ~~C~~C~~C~~~CP~~A 53 (78)
T 1h98_A 37 EECIDCGACVPACPVNA 53 (78)
T ss_dssp TTCCCCCTHHHHCTTCC
T ss_pred ccCCcHhHHHHhCCccc
Confidence 37999999999999863
No 70
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=81.30 E-value=0.28 Score=35.91 Aligned_cols=17 Identities=35% Similarity=0.911 Sum_probs=14.9
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||...
T Consensus 37 ~~C~~Cg~C~~~CP~~A 53 (105)
T 2v2k_A 37 DECVDCGACEPVCPVEA 53 (105)
T ss_dssp TTCCCCCCSGGGCTTCC
T ss_pred CcCcchhhHHHhCCccC
Confidence 37999999999999853
No 71
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=79.20 E-value=0.38 Score=40.69 Aligned_cols=18 Identities=33% Similarity=1.018 Sum_probs=16.4
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
....|+.||.|..+||+.
T Consensus 200 ~~~~C~~Cg~C~~vCP~g 217 (243)
T 1kf6_B 200 GVWSCTFVGYCSEVCPKH 217 (243)
T ss_dssp TGGGCCCCCHHHHHCTTC
T ss_pred CcccCcccCCcchhCCCC
Confidence 567999999999999995
No 72
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=78.77 E-value=0.33 Score=40.93 Aligned_cols=18 Identities=22% Similarity=0.691 Sum_probs=16.2
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
..+.|+.||.|..+||+.
T Consensus 202 ~~~~C~~Cg~C~~vCP~g 219 (238)
T 2wdq_B 202 SVFRCHSIMNCVSVCPKG 219 (238)
T ss_dssp TTTTCCCCCHHHHHCTTC
T ss_pred CCCcCcccchhhhhcCCC
Confidence 467899999999999996
No 73
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=78.56 E-value=0.69 Score=29.46 Aligned_cols=15 Identities=13% Similarity=0.191 Sum_probs=13.8
Q ss_pred HhhhhchhhhcccCc
Q 026956 191 ECILCACCSTSCPSY 205 (230)
Q Consensus 191 ~CI~CG~C~saCP~~ 205 (230)
.|+.||.|+.+||..
T Consensus 40 ~c~~C~~C~~~CP~~ 54 (59)
T 1dwl_A 40 TAECAQDAIDACPVE 54 (59)
T ss_dssp CCGGGGTGGGGSTTC
T ss_pred hhhHHHHHHHhCCHh
Confidence 699999999999975
No 74
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=78.43 E-value=0.43 Score=38.71 Aligned_cols=17 Identities=29% Similarity=0.653 Sum_probs=15.2
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||.-.
T Consensus 44 ~~C~~Cg~Cv~~CP~~A 60 (166)
T 3gyx_B 44 EACWECYSCIKICPQGA 60 (166)
T ss_dssp GGCCCCCHHHHHCSSCC
T ss_pred ccCcccChHhHhCCccc
Confidence 48999999999999864
No 75
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=78.07 E-value=0.51 Score=30.35 Aligned_cols=17 Identities=18% Similarity=0.116 Sum_probs=14.7
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||...
T Consensus 38 ~~C~~C~~C~~~CP~~A 54 (58)
T 1f2g_A 38 SDLDCVEEAIDSCPAEA 54 (58)
T ss_dssp CCSTHHHHHHHTCSSCC
T ss_pred cchHHHHHHHhhCChhh
Confidence 37999999999999853
No 76
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=77.94 E-value=0.44 Score=37.93 Aligned_cols=16 Identities=31% Similarity=0.750 Sum_probs=14.5
Q ss_pred HHhhhhchhhhcccCc
Q 026956 190 YECILCACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~ 205 (230)
..|+.||.|+.+||.-
T Consensus 45 ~~C~~Cg~Cv~~CP~~ 60 (150)
T 1jnr_B 45 DMCWECYSCVKMCPQG 60 (150)
T ss_dssp GGCCCCCHHHHHCTTC
T ss_pred ccCcCHhHHHHhCCcc
Confidence 4799999999999985
No 77
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=77.90 E-value=3.8 Score=28.22 Aligned_cols=56 Identities=14% Similarity=0.155 Sum_probs=33.5
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEEeeC
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL 136 (230)
++++.+ +.||.++|..+.... |.+ .++ .|.|.|||+.+-. .+.+.++.++--+-|+
T Consensus 19 ~~~~~~-~~tv~~ll~~l~~~~-p~~-------~~v--~~~v~vNg~~v~~-~~~L~~gD~V~i~ppv 74 (77)
T 2q5w_D 19 DIVLEQ-ALTVQQFEDLLFERY-PQI-------NNK--KFQVAVNEEFVQK-SDFIQPNDTVALIPPV 74 (77)
T ss_dssp ECCCSS-CEEHHHHHHHHHHHC-GGG-------TTC--CCEEEETTEEECT-TSEECTTCEEEEECSC
T ss_pred EEECCC-CCCHHHHHHHHHHHC-cch-------hcc--eEEEEECCEECCC-CCCcCCCCEEEEECCC
Confidence 455545 789999999876332 211 122 4799999997743 3566664333333333
No 78
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=77.56 E-value=0.57 Score=30.83 Aligned_cols=17 Identities=12% Similarity=0.063 Sum_probs=14.8
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||...
T Consensus 42 ~~C~~C~~C~~~CP~~A 58 (64)
T 1dax_A 42 ASQEEVEEAMDTCPVQC 58 (64)
T ss_dssp SCHHHHHHHHHHSSSCC
T ss_pred cchhHHHHHHHhCCHhh
Confidence 47999999999999853
No 79
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=77.43 E-value=0.6 Score=34.26 Aligned_cols=17 Identities=35% Similarity=0.852 Sum_probs=14.9
Q ss_pred HHHhhhhc--hhhhcccCc
Q 026956 189 MYECILCA--CCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG--~C~saCP~~ 205 (230)
...||.|| .|+.+||..
T Consensus 5 ~~~C~~C~~~~C~~~CP~~ 23 (106)
T 7fd1_A 5 TDNCIKCKYTDCVEVCPVD 23 (106)
T ss_dssp CGGGTTTCCCHHHHHCTTC
T ss_pred ccccCCccCcHHHHHcCcc
Confidence 35899999 999999974
No 80
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=77.15 E-value=0.39 Score=41.14 Aligned_cols=18 Identities=28% Similarity=0.839 Sum_probs=16.1
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
....|+.||.|..+||..
T Consensus 211 ~~~~C~~Cg~C~~~CP~~ 228 (252)
T 2h88_B 211 SLYRCHTIMNCTRTCPKG 228 (252)
T ss_dssp TTTTCCCCCHHHHHCTTC
T ss_pred CCCcCccccchhhhcCCC
Confidence 467999999999999985
No 81
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=77.00 E-value=1.9 Score=30.60 Aligned_cols=47 Identities=9% Similarity=0.148 Sum_probs=29.6
Q ss_pred EeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEEee
Q 026956 70 INLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITP 135 (230)
Q Consensus 70 v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEP 135 (230)
+++++ +.|+.|+|+.++ +.+ + ..+|.+||+.+.-=. .+ + ++.+.|=+
T Consensus 15 ~ev~~-g~Tv~dLL~~Lg--l~~----~---------~VvV~vNG~~v~~d~-~l-~-GD~VeIv~ 61 (74)
T 2l32_A 15 VAVDD-DGTYADLVRAVD--LSP----H---------EVTVLVDGRPVPEDQ-SV-E-VDRVKVLR 61 (74)
T ss_dssp EECST-TCSHHHHHHTTC--CCS----S---------CCCEECCCCCCCTTS-SS-C-CCCEEECS
T ss_pred EEcCC-CCcHHHHHHHcC--CCc----c---------eEEEEECCEECCHHH-CC-C-CCEEEEEE
Confidence 45556 899999999985 221 1 247999998764433 22 3 45555533
No 82
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=76.93 E-value=0.48 Score=40.04 Aligned_cols=19 Identities=32% Similarity=0.978 Sum_probs=16.8
Q ss_pred hcHHHhhhhchhhhcccCc
Q 026956 187 DGMYECILCACCSTSCPSY 205 (230)
Q Consensus 187 ~~~~~CI~CG~C~saCP~~ 205 (230)
.....|+.||.|..+||..
T Consensus 203 ~~~~~C~~Cg~C~~vCP~~ 221 (241)
T 2bs2_B 203 DGVFGCMTLLACHDVCPKN 221 (241)
T ss_dssp TTGGGCCCCCHHHHHCTTC
T ss_pred cCcccCcccChhhHhcCCC
Confidence 3578999999999999985
No 83
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=75.16 E-value=7.7 Score=28.27 Aligned_cols=61 Identities=16% Similarity=0.110 Sum_probs=33.8
Q ss_pred EEeecCCChhHHHHHHHhhhccCCCccccc-CcCCCccCcceEEeCCeeeccccccccCCCCceEE
Q 026956 69 EINLKECGPMVLDALIKIKSEIDPSLTFRR-SCREGICGSCAMNIDGCNGLACLTKISPSGSASTI 133 (230)
Q Consensus 69 ~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~-gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itI 133 (230)
++++.+ +.||-++|..+.... |.+.-.- .+....=..+.|.|||+.+-- .+.+.++ ++|.|
T Consensus 30 ~~e~~~-~~Tv~~Ll~~L~~~~-p~l~~~l~~~~g~~~~~v~v~VNg~~v~~-~~~L~dG-DeV~i 91 (98)
T 1vjk_A 30 EIELPE-GARVRDLIEEIKKRH-EKFKEEVFGEGYDEDADVNIAVNGRYVSW-DEELKDG-DVVGV 91 (98)
T ss_dssp EEEECT-TCBHHHHHHHHHHHC-GGGGGSCBCSSSCTTSSBEEEETTBCCCT-TCBCCTT-CEEEE
T ss_pred EEECCC-CCCHHHHHHHHHhHC-hhHHHHhhccccccCCcEEEEECCEECCC-CCCCCCC-CEEEE
Confidence 445445 789999999876432 2221110 111111245789999997743 5566654 44444
No 84
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=74.55 E-value=13 Score=25.63 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=31.8
Q ss_pred ChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEEeeC
Q 026956 76 GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL 136 (230)
+.||-++|..+.. .|.+.-. =..|.+.|||+.+-.=.+.+.+|.++.-+-|.
T Consensus 20 ~~tv~~ll~~L~~--~~~l~~~-------l~~~~vavN~~~v~~~~~~l~~gDeV~i~Ppv 71 (74)
T 3rpf_C 20 ANDLKELRAILQE--KEGLKEW-------LGVCAIALNDHLIDNLNTPLKDGDVISLLPPV 71 (74)
T ss_dssp CSSHHHHHHHHHT--CTTTTTT-------TTTCEEEESSSEECCTTCCCCTTCEEEEECCB
T ss_pred CCcHHHHHHHHHH--CcCHHHH-------hhccEEEECCEEcCCCCcCCCCCCEEEEECCC
Confidence 5799999999863 2323211 13589999999865545666654333334343
No 85
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=72.20 E-value=0.97 Score=31.39 Aligned_cols=17 Identities=12% Similarity=-0.089 Sum_probs=15.0
Q ss_pred HHhhhhchhhhcccCcc
Q 026956 190 YECILCACCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG~C~saCP~~~ 206 (230)
..|+.||.|+.+||+..
T Consensus 49 ~~c~~C~~C~~~CP~~A 65 (81)
T 1iqz_A 49 ILIDDMMDAFEGCPTDS 65 (81)
T ss_dssp GGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHhCCHhH
Confidence 47999999999999964
No 86
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=71.94 E-value=0.86 Score=31.81 Aligned_cols=17 Identities=29% Similarity=0.661 Sum_probs=15.0
Q ss_pred HHhhhhc------hhhhcccCcc
Q 026956 190 YECILCA------CCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG------~C~saCP~~~ 206 (230)
..|+.|| .|+.+||.-.
T Consensus 35 ~~C~~C~~~~~~~~C~~~CP~~A 57 (82)
T 3eun_A 35 SLCTECVGHYETSQCVEVCPVDA 57 (82)
T ss_dssp GGCCTTTTTCSSCHHHHHCTTCC
T ss_pred hhcCCCCCCCCccHHHHhCCccc
Confidence 4799999 9999999864
No 87
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=71.62 E-value=0.95 Score=41.88 Aligned_cols=19 Identities=37% Similarity=0.809 Sum_probs=16.2
Q ss_pred HHHhhhhchhhhcccCccc
Q 026956 189 MYECILCACCSTSCPSYWW 207 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~~~ 207 (230)
...||.||.|+.+||....
T Consensus 63 ~~~C~~Cg~C~~~CP~~Ai 81 (421)
T 1hfe_L 63 IEACINCGQCLTHCPENAI 81 (421)
T ss_dssp GGGCCCCCTTGGGCTTCCE
T ss_pred hhhCCchhhHHHhhCcCCc
Confidence 4589999999999998743
No 88
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=71.56 E-value=1 Score=31.06 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=14.7
Q ss_pred HHHhhh--hchhhhcccCc
Q 026956 189 MYECIL--CACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~--CG~C~saCP~~ 205 (230)
...|+. ||.|+.+||..
T Consensus 5 ~~~C~~c~C~~C~~~CP~~ 23 (78)
T 1h98_A 5 CEPCIGVKDQSCVEVCPVE 23 (78)
T ss_dssp CGGGTTTCCCHHHHHCTTC
T ss_pred chhCCCCCcChhhhhcCcc
Confidence 358999 99999999974
No 89
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=71.56 E-value=0.98 Score=30.99 Aligned_cols=16 Identities=38% Similarity=0.665 Sum_probs=14.3
Q ss_pred HHhhh--hchhhhcccCc
Q 026956 190 YECIL--CACCSTSCPSY 205 (230)
Q Consensus 190 ~~CI~--CG~C~saCP~~ 205 (230)
..|+. ||.|+.+||..
T Consensus 6 ~~C~~c~C~~C~~~Cp~~ 23 (77)
T 1bc6_A 6 EPCIGTKDASCVEVCPVD 23 (77)
T ss_dssp STTTTCCCCSSTTTCTTC
T ss_pred ccCCCCCcchhHHhcccc
Confidence 47999 99999999974
No 90
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=70.84 E-value=0.72 Score=42.69 Aligned_cols=18 Identities=39% Similarity=0.909 Sum_probs=15.6
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
+...||.||.|+.+||..
T Consensus 31 d~~kCi~Cg~C~~~CP~~ 48 (421)
T 1hfe_L 31 DEAKCIGCDTCSQYCPTA 48 (421)
T ss_dssp CTTTCCCCCHHHHHCTTC
T ss_pred CcccCCCccHHHHhcCcC
Confidence 346899999999999974
No 91
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=70.66 E-value=2.4 Score=29.34 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=21.0
Q ss_pred HHhhhhc------hhhhcccCccc--CCCCCcCHHHHHHHHH
Q 026956 190 YECILCA------CCSTSCPSYWW--TSEAYLGPAALLHANS 223 (230)
Q Consensus 190 ~~CI~CG------~C~saCP~~~~--~~~~FlGPaal~~a~R 223 (230)
..|+.|| .|+.+||.-.. ......-...+..-++
T Consensus 35 ~~C~~C~~~~~~~~C~~~CP~~Ai~~~~~~~~~~~~~~~~~~ 76 (82)
T 2fgo_A 35 NLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYR 76 (82)
T ss_dssp TTCCTTTTTCSSCHHHHHCTTCCCCBCTTSCCCHHHHHHHHH
T ss_pred hhCccCCCcCCCCHhHhhCCcccEEccCCCccCHHHHHHHHH
Confidence 3799999 99999997532 2122233455555444
No 92
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=69.82 E-value=0.84 Score=31.57 Aligned_cols=17 Identities=29% Similarity=0.800 Sum_probs=14.9
Q ss_pred HHhhhhc------hhhhcccCcc
Q 026956 190 YECILCA------CCSTSCPSYW 206 (230)
Q Consensus 190 ~~CI~CG------~C~saCP~~~ 206 (230)
..|+.|| .|+.+||.-.
T Consensus 35 ~~C~~C~~~~~~~~C~~~CP~~A 57 (80)
T 1rgv_A 35 TKCSECVGAFDEPQCRLVCPADC 57 (80)
T ss_dssp TTCCTTTTTCSSCHHHHHCSSCC
T ss_pred hhCcCCCCcCCccHHHHhcCccc
Confidence 4799999 9999999864
No 93
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=69.78 E-value=1.1 Score=39.68 Aligned_cols=19 Identities=21% Similarity=0.658 Sum_probs=17.0
Q ss_pred hcHHHhhhhchhhhcccCc
Q 026956 187 DGMYECILCACCSTSCPSY 205 (230)
Q Consensus 187 ~~~~~CI~CG~C~saCP~~ 205 (230)
...+.|..||.|..+||..
T Consensus 234 ~~l~~C~~Cg~C~~vCP~g 252 (282)
T 3vr8_B 234 FSAFKCHTIMNCTKTCPKH 252 (282)
T ss_pred CCcccChhhCCccccCcCC
Confidence 3678999999999999985
No 94
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=68.70 E-value=11 Score=26.55 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=36.5
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCccccc-CcCCCccCcceEEeCCeeeccccccccCCCCceEEeeC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRR-SCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~-gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL 136 (230)
.++++.+ +.||-++|..+.... |.+.-+- .-....=..+.|.|||+.+-. .+.+.++.++.-+-|+
T Consensus 20 ~~~~~~~-~~Tv~~ll~~L~~~~-p~~~~~~l~~~g~l~~~~~v~VN~~~v~~-~~~l~~gDeV~i~Ppv 86 (89)
T 3po0_A 20 VRVDVDG-DATVGDALDALVGAH-PALESRVFGDDGELYDHINVLRNGEAAAL-GEATAAGDELALFPPV 86 (89)
T ss_dssp EEEECCT-TCBHHHHHHHHHHHC-GGGHHHHBCTTSCBCTTSEEEETTEECCT-TSBCCTTCEEEEECCC
T ss_pred EEEECCC-CCcHHHHHHHHHHHC-cHHHHHHhccCCcccccEEEEECCEECCC-CcccCCCCEEEEECCC
Confidence 4556655 789999999986432 3232100 000011123799999998754 5666665444334444
No 95
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=66.41 E-value=1.5 Score=31.77 Aligned_cols=17 Identities=24% Similarity=0.626 Sum_probs=14.6
Q ss_pred HHHhhhh--chhhhcccCc
Q 026956 189 MYECILC--ACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~C--G~C~saCP~~ 205 (230)
...||.| |.|+.+||..
T Consensus 5 ~~~C~~C~c~~C~~~CP~~ 23 (105)
T 2v2k_A 5 AEPCVDVKDKACIEECPVD 23 (105)
T ss_dssp CGGGTTTCCCHHHHHCTTC
T ss_pred cccCCCCCcChhhhhcCcc
Confidence 3579988 9999999974
No 96
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=66.19 E-value=0.97 Score=47.55 Aligned_cols=18 Identities=33% Similarity=0.770 Sum_probs=15.9
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
+...||.||.|+.+||..
T Consensus 684 d~~kCi~Cg~Cv~vCP~~ 701 (1231)
T 2c42_A 684 VPENCIQCNQCAFVCPHS 701 (1231)
T ss_dssp CTTTCCCCCHHHHHCSSC
T ss_pred eCccCCchhhHHHhCCcc
Confidence 357899999999999986
No 97
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=66.02 E-value=19 Score=27.13 Aligned_cols=67 Identities=25% Similarity=0.253 Sum_probs=42.4
Q ss_pred CceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEE--eCC-eeeccccccccC-CCCceEEeeCCC
Q 026956 63 PELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMN--IDG-CNGLACLTKISP-SGSASTITPLPH 138 (230)
Q Consensus 63 ~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~--ING-~~~LAC~t~v~~-~~~~itIEPL~~ 138 (230)
|.-|.=.|++.+ |+||-|+|..+.+.-. | .+-.|+|. .+| +...+=.+-+.. .++++.||=|.+
T Consensus 25 PNqQrT~V~Vrp-G~tlrdAL~KaLk~R~--L---------~pe~C~Vy~~~~~~~~~IdWdtDi~~L~~eEL~Ve~ld~ 92 (95)
T 2l05_A 25 PNKQRTVVPARC-GVTVRDSLKKALMMRG--L---------IPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLEN 92 (95)
T ss_dssp TTTEEEEEECCT-TCBHHHHHHHHHHHHT--C---------CGGGEEEEEEETTEEEEECTTSBGGGGTTCEEEEEESCC
T ss_pred CCCCeEEEEecC-CcCHHHHHHHHHHHcC--C---------CHHHcEEEEcCCCCccccchhHhhhhccCcEEEEEEecC
Confidence 333556688888 9999999998652111 1 23348887 346 333333333332 367899999998
Q ss_pred Ccc
Q 026956 139 MFV 141 (230)
Q Consensus 139 ~pv 141 (230)
||+
T Consensus 93 ~P~ 95 (95)
T 2l05_A 93 VPL 95 (95)
T ss_dssp SCC
T ss_pred CCC
Confidence 884
No 98
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=64.89 E-value=16 Score=26.70 Aligned_cols=54 Identities=6% Similarity=-0.023 Sum_probs=32.5
Q ss_pred EEEEEeecCCC-hhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc---cccccCCCCceEEeeCC
Q 026956 66 KEFEINLKECG-PMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC---LTKISPSGSASTITPLP 137 (230)
Q Consensus 66 ~~y~v~v~~~~-~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC---~t~v~~~~~~itIEPL~ 137 (230)
++++++ + + .||.++|..+. +++ ..++|.|||+.+--- .+.+.++.++-.|-|+.
T Consensus 28 e~~el~--~-~~~Tv~dLL~~L~--~~~-------------~~vaVavNg~iV~~~~~~~~~L~dGD~Vei~~~V~ 85 (87)
T 1tyg_B 28 KDVKWK--K-DTGTIQDLLASYQ--LEN-------------KIVIVERNKEIIGKERYHEVELCDRDVIEIVHFVG 85 (87)
T ss_dssp EEECCS--S-SCCBHHHHHHHTT--CTT-------------SCCEEEETTEEECGGGTTTSBCCSSSEEEEEEECC
T ss_pred EEEECC--C-CCCcHHHHHHHhC--CCC-------------CCEEEEECCEECChhhcCCcCCCCCCEEEEEcccc
Confidence 344443 4 5 89999999884 221 236899999876432 35566654443444443
No 99
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=63.74 E-value=44 Score=25.32 Aligned_cols=71 Identities=11% Similarity=-0.000 Sum_probs=37.5
Q ss_pred EEEEeecC--CChhHHHHHHHhhhccCCCcccccCcC-CCccCcceEEeCCeeec---cccccccCCCCceEEeeCCC
Q 026956 67 EFEINLKE--CGPMVLDALIKIKSEIDPSLTFRRSCR-EGICGSCAMNIDGCNGL---ACLTKISPSGSASTITPLPH 138 (230)
Q Consensus 67 ~y~v~v~~--~~~TvLdaL~~i~~~~d~~l~fr~gCr-~GiCGsCaV~ING~~~L---AC~t~v~~~~~~itIEPL~~ 138 (230)
.++|+++. ...||-++|.++.+.+. .+.-+--.. ..+=.-.-|.|||+.+. .=.|.+.++.++.-|-|+.+
T Consensus 31 ~~~vel~~~~~~~TV~~Ll~~L~~~~~-~~~~~lf~~~g~lr~~i~VlVN~~di~~l~gldt~L~dGDeV~iip~vaG 107 (114)
T 1wgk_A 31 KHQVALPGQEEPWDIRNLLVWIKKNLL-KERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFISTLHG 107 (114)
T ss_dssp EEEEEECCCSSCCBHHHHHHHHTTTTC-CSCHHHHCCSSSCCSSEEEEESSSBHHHHCTTTCBCCSSEEEEEEECSCC
T ss_pred EEEEEeCCCCCCCCHHHHHHHHHHHcc-chhHhhCccCCcccCCeEEEECCeeeeccCCcCcCCCCCCEEEEeCCCCC
Confidence 44566542 13699999999875542 222111111 11333467999998653 23456666544434444443
No 100
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=63.52 E-value=1.3 Score=46.67 Aligned_cols=16 Identities=31% Similarity=1.086 Sum_probs=14.6
Q ss_pred HHHhhhhchhhhcccC
Q 026956 189 MYECILCACCSTSCPS 204 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~ 204 (230)
...|+.||.|+.+||.
T Consensus 741 ~~~C~gCG~Cv~vCP~ 756 (1231)
T 2c42_A 741 TLDCMGCGNCADICPP 756 (1231)
T ss_dssp TTTCCCCCHHHHHCSS
T ss_pred hhhCCChhHHHhhCCC
Confidence 3589999999999999
No 101
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=63.33 E-value=1.5 Score=39.85 Aligned_cols=18 Identities=33% Similarity=1.006 Sum_probs=15.6
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
+...|+.||.|+.+||..
T Consensus 237 d~~~C~~Cg~C~~~CP~~ 254 (366)
T 3mm5_B 237 DVEKCMYCGNCYTMCPGM 254 (366)
T ss_dssp CGGGCCCCCHHHHHCTTC
T ss_pred ehhhCCCcchHHHhCCHh
Confidence 345899999999999995
No 102
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=63.28 E-value=2.7 Score=30.18 Aligned_cols=13 Identities=23% Similarity=0.503 Sum_probs=11.0
Q ss_pred EEEEEeeCCCCCC
Q 026956 49 KFQIYRWNPDSPS 61 (230)
Q Consensus 49 ~lkI~Rfdp~~d~ 61 (230)
++|||||||++..
T Consensus 39 ~iKIykyde~tNe 51 (72)
T 3kvp_A 39 YIKIYEYNESRNE 51 (72)
T ss_dssp EEEEEEEETTTTE
T ss_pred EEEEEEeCCCCCe
Confidence 3899999998764
No 103
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=62.97 E-value=1.9 Score=37.70 Aligned_cols=17 Identities=12% Similarity=-0.095 Sum_probs=15.0
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||.-
T Consensus 96 ~~~CigC~~C~~~CP~~ 112 (274)
T 1ti6_B 96 PEKAKGKKELLDTCPYG 112 (274)
T ss_dssp TTTTTTCGGGGGGCSSC
T ss_pred hhhccchHHHHhhCccC
Confidence 45899999999999974
No 104
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=61.66 E-value=13 Score=25.10 Aligned_cols=49 Identities=10% Similarity=0.035 Sum_probs=30.2
Q ss_pred ecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc---cccccCCCCceEEeeC
Q 026956 72 LKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC---LTKISPSGSASTITPL 136 (230)
Q Consensus 72 v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC---~t~v~~~~~~itIEPL 136 (230)
+.+ +.||.++|..+. +.+ ..++|.+||+.+-.- .+.+.++..+--+-|+
T Consensus 12 ~~~-~~tv~~ll~~l~--~~~-------------~~v~vavN~~~v~~~~~~~~~L~~gD~v~i~~~V 63 (66)
T 1f0z_A 12 CAA-GQTVHELLEQLD--QRQ-------------AGAALAINQQIVPREQWAQHIVQDGDQILLFQVI 63 (66)
T ss_dssp CCT-TCCHHHHHHHHT--CCC-------------SSEEEEETTEEECHHHHTTCCCCTTEEECEEESC
T ss_pred cCC-CCcHHHHHHHcC--CCC-------------CCEEEEECCEECCchhcCCcCCCCCCEEEEEeec
Confidence 334 789999999885 111 236899999976432 4556654333334444
No 105
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=61.45 E-value=1.4 Score=40.41 Aligned_cols=17 Identities=35% Similarity=0.989 Sum_probs=15.0
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||..
T Consensus 255 ~~~Ci~Cg~C~~~CP~~ 271 (386)
T 3or1_B 255 NDRCMYCGNCYTMCPAL 271 (386)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred CCcCCccccHHHhCcHh
Confidence 45899999999999984
No 106
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=60.24 E-value=1.5 Score=42.08 Aligned_cols=20 Identities=30% Similarity=0.763 Sum_probs=16.7
Q ss_pred cHHHhhhhchhhhcccCccc
Q 026956 188 GMYECILCACCSTSCPSYWW 207 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~~~ 207 (230)
+...||.||.|+.+||....
T Consensus 186 ~~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 186 DDTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp GGSSCCCCCHHHHHCSSTTE
T ss_pred chhhCCcchhHHHhhccCCc
Confidence 35689999999999998643
No 107
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=58.62 E-value=18 Score=25.27 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=30.1
Q ss_pred ChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc---cccccCCCCceEEeeCC
Q 026956 76 GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC---LTKISPSGSASTITPLP 137 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC---~t~v~~~~~~itIEPL~ 137 (230)
++||.++|..++ +++ ..++|.+||.-+-.- .+.+.+|..+-.+.|+.
T Consensus 14 ~~Tl~~LL~~l~--~~~-------------~~vAV~vNg~iVpr~~~~~~~L~dGD~veIv~~Vg 63 (73)
T 2kl0_A 14 SASVAALMTELD--CTG-------------GHFAVALNYDVVPRGKWDETPVTAGDEIEILTPRQ 63 (73)
T ss_dssp CSBHHHHHHHTT--CCS-------------SSCEEEESSSEECHHHHTTCBCCTTCEEEEECCCC
T ss_pred CCcHHHHHHHcC--CCC-------------CcEEEEECCEECChHHcCcccCCCCCEEEEEcccc
Confidence 689999999875 221 236999999876444 35566554443444444
No 108
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=58.32 E-value=13 Score=28.10 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=26.8
Q ss_pred cCCCCceEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhh
Q 026956 41 ASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIK 87 (230)
Q Consensus 41 ~~~~~~~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~ 87 (230)
|.++.++++|.|---+.+ -..|.|+ .. +.+|+|+|....
T Consensus 2 ~~~g~k~i~i~v~~~~~~------~~~~~v~-t~-g~tL~dvLk~~~ 40 (101)
T 3u7z_A 2 ASEGEKHITVTVIHGDQT------ENVFEFD-TD-AKYLGEVLESEN 40 (101)
T ss_dssp ---CCEEEEEEEECTTSC------EEEEEEE-EC-CSBHHHHHHHTT
T ss_pred CccceeEEEEEEEcCCCc------eeEEEEc-CC-ccHHHHHHHHcC
Confidence 456778888888663322 4678888 55 889999999865
No 109
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=58.14 E-value=2.1 Score=37.66 Aligned_cols=17 Identities=35% Similarity=0.882 Sum_probs=14.9
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||.-
T Consensus 130 ~~~CigCg~C~~~CP~~ 146 (294)
T 1kqf_B 130 SENCIGCGYCIAGCPFN 146 (294)
T ss_dssp GGGCCCCCHHHHHCTTC
T ss_pred cccCCCcchhhhcCCCC
Confidence 45899999999999974
No 110
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=57.48 E-value=2.4 Score=42.76 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=16.2
Q ss_pred hcHHHhhhhchhhhcccCc
Q 026956 187 DGMYECILCACCSTSCPSY 205 (230)
Q Consensus 187 ~~~~~CI~CG~C~saCP~~ 205 (230)
.....|+.||.|..+||+.
T Consensus 450 ~~~~~Ci~Cg~C~~vCP~g 468 (807)
T 3cf4_A 450 EIHDTCIGCRRCEQVCKKE 468 (807)
T ss_dssp HHHHHCCCCCHHHHHCTTC
T ss_pred hchhhccchhhHHHhCCCC
Confidence 3467899999999999985
No 111
>2qjl_A URM1, ubiquitin-related modifier 1; ubiquitin-like protein, signaling protein; 1.44A {Saccharomyces cerevisiae} PDB: 2pko_A 2ax5_A
Probab=57.44 E-value=51 Score=23.79 Aligned_cols=68 Identities=13% Similarity=-0.003 Sum_probs=35.3
Q ss_pred EEEEEeec--CCChhHHHHHHHhhhccCCCcccccC--c-CCC-ccCcceEEeCCeeecc---ccccccCCCCceEEeeC
Q 026956 66 KEFEINLK--ECGPMVLDALIKIKSEIDPSLTFRRS--C-REG-ICGSCAMNIDGCNGLA---CLTKISPSGSASTITPL 136 (230)
Q Consensus 66 ~~y~v~v~--~~~~TvLdaL~~i~~~~d~~l~fr~g--C-r~G-iCGsCaV~ING~~~LA---C~t~v~~~~~~itIEPL 136 (230)
.+.++++. + +.||-+++.++.+... .+ +..- . ..| +=..+.|.|||+.+-- =.+.+.++.++.-+-|+
T Consensus 20 ~~~~~~l~~~~-~~Tv~~L~~~L~~~~~-~~-~~~l~~~~~~~~lr~~~~v~VN~~~~~~~~~~d~~L~dgDeVa~~Ppv 96 (99)
T 2qjl_A 20 RVHKIKMDKED-PVTVGDLIDHIVSTMI-NN-PNDVSIFIEDDSIRPGIITLINDTDWELEGEKDYILEDGDIISFTSTL 96 (99)
T ss_dssp CEEEEEECSCS-CCBHHHHHHHHHHHTC-SS-GGGHHHHEETTEECTTEEEEETTEEGGGGTGGGCBCCTTCEEEEEECT
T ss_pred cEEEEecCCCC-CCcHHHHHHHHHHHCc-hh-hHHHhhhccCCccccCeEEEECCEEccccCCCCcCcCCCCEEEEECCC
Confidence 44556554 4 6899999998864432 11 1100 0 001 1123679999997632 24556554433334343
No 112
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=57.38 E-value=1.8 Score=35.73 Aligned_cols=17 Identities=35% Similarity=0.966 Sum_probs=14.8
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||.-
T Consensus 87 ~~~CigC~~C~~~CP~~ 103 (195)
T 2vpz_B 87 PKKCIACGACIAACPYD 103 (195)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred CCCCCCcChhHhhCCCC
Confidence 45899999999999964
No 113
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=57.30 E-value=1.8 Score=39.42 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=14.6
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||.-
T Consensus 181 ~~kCigCg~Cv~aCP~~ 197 (352)
T 2ivf_B 181 QERCKGHRHCVEACPYK 197 (352)
T ss_dssp TTTCCCCCHHHHHCTTC
T ss_pred hhhcCCchHHHhhcCcc
Confidence 35899999999999975
No 114
>1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A
Probab=57.26 E-value=8.7 Score=26.87 Aligned_cols=49 Identities=18% Similarity=0.214 Sum_probs=29.9
Q ss_pred eecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEEeeC
Q 026956 71 NLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 71 ~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL 136 (230)
++.+ +.||.++|..+. ++ . ..++|.|||+.+-. .+.+.++.++-.+-|+
T Consensus 26 ~~~~-~~Tv~dLl~~L~--~~------~-------~~v~VavNg~~v~~-~~~L~dGD~V~i~ppv 74 (77)
T 1rws_A 26 EWRE-GMKVRDILRAVG--FN------T-------ESAIAKVNGKVVLE-DDEVKDGDFVEVIPVV 74 (77)
T ss_dssp CCCS-SCCHHHHHHTTT--CS------S-------CSSCEEETTEEECS-SSCCCSSCCCBCSCCC
T ss_pred ECCC-CCcHHHHHHHhC--CC------C-------cCEEEEECCEECCC-CCCcCCCCEEEEEccc
Confidence 4445 789999999875 11 1 23589999997743 2566655433333343
No 115
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=57.20 E-value=2.2 Score=40.57 Aligned_cols=19 Identities=26% Similarity=0.611 Sum_probs=16.3
Q ss_pred hcHHHhhhhchhhhcccCc
Q 026956 187 DGMYECILCACCSTSCPSY 205 (230)
Q Consensus 187 ~~~~~CI~CG~C~saCP~~ 205 (230)
.+...||.||.|.-+||.-
T Consensus 548 i~~~~Ci~C~~C~~~cp~~ 566 (584)
T 2gmh_A 548 INAQNCVHCKTCDIKDPSQ 566 (584)
T ss_dssp ECGGGCCCCCHHHHHCTTC
T ss_pred EeCCCCcCCCCchhhCCCC
Confidence 3567899999999999975
No 116
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=56.53 E-value=15 Score=26.09 Aligned_cols=48 Identities=10% Similarity=0.036 Sum_probs=29.5
Q ss_pred ChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc---cccccCCCCceEEeeCC
Q 026956 76 GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC---LTKISPSGSASTITPLP 137 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC---~t~v~~~~~~itIEPL~ 137 (230)
++||.++|..++ ++ + . ..++|.+||.-+--- .+.+.+|..+-.+.|+.
T Consensus 17 ~~Tl~~LL~~l~--~~----~-~-------~~vAVavNg~iVpr~~~~~~~L~dGD~IEIv~~Vg 67 (78)
T 2k5p_A 17 SLNVTELLSALK--VA----Q-A-------EYVTVELNGEVLEREAFDATTVKDGDAVEFLYFMG 67 (78)
T ss_dssp CEEHHHHHHHHT--CS----C-T-------TTCCEEETTEECCTTHHHHCEECSSBCEEECCCCC
T ss_pred CCcHHHHHHHcC--CC----C-C-------CcEEEEECCEECChHHcCcccCCCCCEEEEEeeec
Confidence 689999999875 22 0 0 136899999866443 45555543333344444
No 117
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=54.55 E-value=44 Score=22.70 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=30.6
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEEeeC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTITPL 136 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itIEPL 136 (230)
+++++ .+ +.||.++|.++. +.+ ..++|.+||+.+-.= +.+.++..+--+.|.
T Consensus 16 ~~~~~--~~-~~tv~~Ll~~l~--~~~-------------~~v~vavN~~~v~~~-~~L~~gD~V~ii~~V 67 (70)
T 1ryj_A 16 KILES--GA-PRRIKDVLGELE--IPI-------------ETVVVKKNGQIVIDE-EEIFDGDIIEVIRVI 67 (70)
T ss_dssp EEEEE--SS-CCBHHHHHHHTT--CCT-------------TTEEEEETTEECCTT-SBCCTTCEEEEEECT
T ss_pred eeEEC--CC-CCcHHHHHHHhC--CCC-------------CCEEEEECCEECCCc-ccCCCCCEEEEEecc
Confidence 34444 45 689999999875 111 135899999976432 255554333334444
No 118
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=52.80 E-value=45 Score=24.64 Aligned_cols=66 Identities=23% Similarity=0.255 Sum_probs=41.3
Q ss_pred CceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEe--CC-eeeccccccccC-CCCceEEeeCCC
Q 026956 63 PELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNI--DG-CNGLACLTKISP-SGSASTITPLPH 138 (230)
Q Consensus 63 ~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~I--NG-~~~LAC~t~v~~-~~~~itIEPL~~ 138 (230)
|.-|.=.|++.+ |+||-|+|..+.+. - .| .+-.|+|.. +| +....=.+-+.. .++++.||-|.+
T Consensus 15 Pn~QrT~V~Vrp-G~tlrdaL~KaLk~-R-~L---------~pe~C~Vy~~~~~~~~~IdWdtDi~~L~~eEL~Ve~ld~ 82 (86)
T 1wxm_A 15 PNKQRTVVTVRD-GMSVYDSLDKALKV-R-GL---------NQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLSG 82 (86)
T ss_dssp SSSCEEEEECCS-SCBSHHHHHHHHHT-T-TC---------CSSSEEEEEESSSCEEEECSSSBSTTCSSCEEEEEECCS
T ss_pred CCCCeEEEEecC-CcCHHHHHHHHHHH-c-CC---------CHHHeEEEEcCCCCccccchhHhhhhccCcEEEEEEccc
Confidence 434556688888 99999999987532 1 12 133488874 35 233333333332 367899999888
Q ss_pred Cc
Q 026956 139 MF 140 (230)
Q Consensus 139 ~p 140 (230)
||
T Consensus 83 ~~ 84 (86)
T 1wxm_A 83 PS 84 (86)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 119
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=52.50 E-value=22 Score=24.40 Aligned_cols=57 Identities=7% Similarity=0.052 Sum_probs=32.4
Q ss_pred EEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccCCCCceEE
Q 026956 67 EFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPSGSASTI 133 (230)
Q Consensus 67 ~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~~~~itI 133 (230)
+.+++ .+ +.||-++|+.+... -|.+.-.- .. |.+.|.|||+.+- =.+.+.++ +++.|
T Consensus 18 ~~~~~-~~-~~tv~~ll~~L~~~-~p~~~~~l--~~---~~~~v~vN~~~v~-~~~~l~~g-D~V~i 74 (81)
T 1fm0_D 18 ATEVA-AD-FPTVEALRQHMAAQ-SDRWALAL--ED---GKLLAAVNQTLVS-FDHPLTDG-DEVAF 74 (81)
T ss_dssp EEEEC-SC-CSBHHHHHHHHHTT-CHHHHHHH--CC---TTCEEEETTEECC-TTCBCCTT-CEEEE
T ss_pred eEEEc-CC-CCCHHHHHHHHHHH-ChhHHHHh--cC---CCEEEEECCEECC-CCCCCCCC-CEEEE
Confidence 34555 44 78999999988632 22222111 11 2468999999763 24455554 44444
No 120
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=51.27 E-value=3.2 Score=41.18 Aligned_cols=18 Identities=11% Similarity=0.058 Sum_probs=15.8
Q ss_pred HhhhhchhhhcccCcccC
Q 026956 191 ECILCACCSTSCPSYWWT 208 (230)
Q Consensus 191 ~CI~CG~C~saCP~~~~~ 208 (230)
.|+.||.|+.+||+....
T Consensus 219 ~C~~CG~Cv~vCP~gAl~ 236 (783)
T 3i9v_3 219 PSGFSGNITDICPVGALL 236 (783)
T ss_dssp CSTTTTTHHHHCSSSSEE
T ss_pred CCccchhHHhhcccCcee
Confidence 799999999999997543
No 121
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=50.97 E-value=29 Score=23.09 Aligned_cols=46 Identities=9% Similarity=0.085 Sum_probs=27.9
Q ss_pred ChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccc---cccccCCCCceEEeeC
Q 026956 76 GPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLAC---LTKISPSGSASTITPL 136 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC---~t~v~~~~~~itIEPL 136 (230)
+.||.++|..+.. . . ...+|.+||+.+-.= .+.+.++..+--+-|+
T Consensus 13 ~~tv~~ll~~l~~--~------~-------~~v~vavN~~~v~~~~~~~~~L~dgD~v~i~~~V 61 (64)
T 2cu3_A 13 GKTLKEVLEEMGV--E------L-------KGVAVLLNEEAFLGLEVPDRPLRDGDVVEVVALM 61 (64)
T ss_dssp TCCHHHHHHHHTB--C------G-------GGEEEEETTEEEEGGGCCCCCCCTTCEEEEEECC
T ss_pred CCcHHHHHHHcCC--C------C-------CcEEEEECCEECCccccCCcCCCCCCEEEEEeec
Confidence 6899999998851 1 1 236899999876432 3455554333334443
No 122
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=50.89 E-value=44 Score=24.83 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=30.9
Q ss_pred EEEEEeecCCChhHHHHHHHhhh-ccCCCcccccCcCCCccCcceEEeCCeeeccccccccCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKS-EIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISPS 127 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~-~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~~ 127 (230)
..+.+++.+ +.||.++|...+- ..-|.+... ..+|-|||+.+- -.+.+.+|
T Consensus 26 ~~~~~~v~~-g~TV~daI~~~gi~~~~peIdl~---------~~~V~Vng~~v~-~d~~L~dG 77 (97)
T 2hj1_A 26 YLKSFQVDE-GITVQTAITQSGILSQFPEIDLS---------TNKIGIFSRPIK-LTDVLKEG 77 (97)
T ss_dssp EEEEEEEET-TCBHHHHHHHHTHHHHCTTCCTT---------TSEEEEEECSCC-TTCBCCTT
T ss_pred EEEEEEcCC-CCcHHHHHHHcCCCccCCccccc---------ccEEEEcCEECC-CCccCCCC
Confidence 344556656 8999999998641 111112211 258999999886 34444444
No 123
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=50.62 E-value=3 Score=40.45 Aligned_cols=15 Identities=40% Similarity=0.964 Sum_probs=14.0
Q ss_pred HhhhhchhhhcccCc
Q 026956 191 ECILCACCSTSCPSY 205 (230)
Q Consensus 191 ~CI~CG~C~saCP~~ 205 (230)
-||.||.|+--||.-
T Consensus 54 ~c~~~~~~~~~cp~~ 68 (608)
T 3j16_B 54 LCIGCGICVKKCPFD 68 (608)
T ss_dssp TCCCCCHHHHHCSSC
T ss_pred hccccccccccCCcc
Confidence 799999999999975
No 124
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=50.14 E-value=67 Score=24.15 Aligned_cols=66 Identities=21% Similarity=0.140 Sum_probs=42.1
Q ss_pred eEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCC---eeeccccccccC-CCCceEEeeCCCCc
Q 026956 65 LKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDG---CNGLACLTKISP-SGSASTITPLPHMF 140 (230)
Q Consensus 65 ~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING---~~~LAC~t~v~~-~~~~itIEPL~~~p 140 (230)
-|.=.|++.+ |+|+-|+|..+.+. - .| .+-.|+|..-+ +...+=.+-+.. .++++.+|=|.++|
T Consensus 23 qQrT~V~Vrp-G~tlrdaL~KaLk~-R-~L---------~pe~C~Vy~~~~~~~~~I~WdtDi~~L~geEL~Ve~ld~~p 90 (96)
T 3ny5_A 23 KQRTVVPARC-GVTVRDSLKKALMM-R-GL---------IPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVP 90 (96)
T ss_dssp TEEEEEECCT-TCBHHHHHHHHHHT-T-TC---------CGGGEEEEECC---CEEECTTBBGGGGTTCEEEEEECCCCC
T ss_pred CceEEEEecC-CcCHHHHHHHHHHH-c-CC---------ChHHeEEEEccCCCcCcccccccchhcccceEEehhhhcCC
Confidence 3556688888 99999999987531 1 12 23348887653 233333333321 36788999999998
Q ss_pred ce
Q 026956 141 VI 142 (230)
Q Consensus 141 vi 142 (230)
.+
T Consensus 91 lt 92 (96)
T 3ny5_A 91 LT 92 (96)
T ss_dssp BC
T ss_pred Cc
Confidence 75
No 125
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=49.44 E-value=2.9 Score=40.14 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=14.2
Q ss_pred HHHhhhhchhhhcccCc
Q 026956 189 MYECILCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~ 205 (230)
...||.||.|+.+||.-
T Consensus 214 ~~kCigCg~Cv~~CP~~ 230 (512)
T 1q16_B 214 QDKCRGWRMCITGCPYK 230 (512)
T ss_dssp TTTCCCCCCHHHHCTTC
T ss_pred HHHCCCchHHHhhCCcc
Confidence 45799999999999974
No 126
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=48.72 E-value=2.2 Score=37.50 Aligned_cols=20 Identities=30% Similarity=0.860 Sum_probs=17.3
Q ss_pred HhcHHHhhhhchhhhcccCc
Q 026956 186 LDGMYECILCACCSTSCPSY 205 (230)
Q Consensus 186 ~~~~~~CI~CG~C~saCP~~ 205 (230)
+.+...||.|+.|..+|+..
T Consensus 33 ~iD~~kCigC~~C~~AC~~~ 52 (294)
T 1kqf_B 33 LIDVSTCIGCKACQVACSEW 52 (294)
T ss_dssp EEETTTCCCCCHHHHHHHHH
T ss_pred EEeHhhCCCCcHHHHHHHHH
Confidence 45678999999999999975
No 127
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.59 E-value=3.5 Score=42.07 Aligned_cols=15 Identities=33% Similarity=0.919 Sum_probs=9.5
Q ss_pred HHhhhhchhhhcccC
Q 026956 190 YECILCACCSTSCPS 204 (230)
Q Consensus 190 ~~CI~CG~C~saCP~ 204 (230)
..|+.||.|+.+||.
T Consensus 984 ~~C~~Cg~C~~~CP~ 998 (1025)
T 1gte_A 984 DTCTGCTLCLSVCPI 998 (1025)
T ss_dssp TTCCCCCHHHHHCSS
T ss_pred ccCCChhHHHhhCCC
Confidence 456666666666665
No 128
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=48.38 E-value=21 Score=26.03 Aligned_cols=56 Identities=29% Similarity=0.454 Sum_probs=32.5
Q ss_pred ChhHHHHHHHhhhccCCCcccc--cCc--CCCc---cCcceEEeCCeeec---cccccccCCCCceEE
Q 026956 76 GPMVLDALIKIKSEIDPSLTFR--RSC--REGI---CGSCAMNIDGCNGL---ACLTKISPSGSASTI 133 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr--~gC--r~Gi---CGsCaV~ING~~~L---AC~t~v~~~~~~itI 133 (230)
+.||-++|..+.... |.+.-. ..+ +..+ ||+=.|.|||+.+. .-.+.+.++ ++|.|
T Consensus 27 ~~tv~~ll~~L~~~~-p~l~~~l~~~g~l~~~v~~~~~~~~v~VNg~~v~~~~~~~~~L~~g-D~V~i 92 (99)
T 2l52_A 27 GEKVIDVLLSLTDKY-PALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDS-DEIGI 92 (99)
T ss_dssp CSSHHHHHHHHHHHC-GGGTTTSBCSCCTTSSCCCBCSSCEEEETTSCGGGTTSTTSCCCTT-EEEEE
T ss_pred CCcHHHHHHHHHHHC-hhHHHHHhcccccccceeccccccEEEECCEEccccCCCCCCCCCC-CEEEE
Confidence 368999999876432 222111 112 2234 99999999999763 344555554 44444
No 129
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.13 E-value=2.5 Score=43.18 Aligned_cols=17 Identities=29% Similarity=0.720 Sum_probs=14.8
Q ss_pred cHHHhhhhchhhhcccC
Q 026956 188 GMYECILCACCSTSCPS 204 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~ 204 (230)
+...||.||.|+.+||.
T Consensus 949 d~~~C~~Cg~C~~~CP~ 965 (1025)
T 1gte_A 949 DEEMCINCGKCYMTCND 965 (1025)
T ss_dssp CTTTCCCCCHHHHHHHH
T ss_pred EcccCcccCHHHHhcCc
Confidence 34689999999999995
No 130
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=46.99 E-value=3.4 Score=38.54 Aligned_cols=18 Identities=28% Similarity=0.661 Sum_probs=15.6
Q ss_pred HHHhhhhchhhhcccCcc
Q 026956 189 MYECILCACCSTSCPSYW 206 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~~~ 206 (230)
...||.||.|+.+||...
T Consensus 283 ~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 283 NRECVRCMHCINKMPKAL 300 (418)
T ss_dssp TTTCCCCCHHHHHCTTTE
T ss_pred hhhcCccChhHHhCcHhh
Confidence 458999999999999863
No 131
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=44.78 E-value=31 Score=32.01 Aligned_cols=53 Identities=19% Similarity=0.244 Sum_probs=33.6
Q ss_pred CCCCceEEEEEEe-eCCCCCCCCceEEEEEeecCCChhHHHHHHHhhhccCCCccccc
Q 026956 42 SANTDTKKFQIYR-WNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRR 98 (230)
Q Consensus 42 ~~~~~~v~lkI~R-fdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~ 98 (230)
+....+|+++|+- +++-....+ .+|+|.+.+ |.+|+++|.... +.+|-|.|..
T Consensus 290 ~~~~I~VtytV~~~~~~~~~~~~--~~~~Vtv~~-gssll~vLk~a~-e~n~~F~F~~ 343 (399)
T 2pmv_A 290 SASNITVIYTINNQLRGVELLFN--ETINVSVKS-GSVLLVVLEEAQ-RKNPMFKFET 343 (399)
T ss_dssp CCCSEEEEEEEECCCSSCCCCEE--CCEEEESSS-CSCHHHHHHHHH-HSCCSCCEEE
T ss_pred CCceEEEEEEEecccccccCCCC--cceEEEecC-CCCHHHHHHHHH-HhCcCCceEE
Confidence 3355788888873 111111112 225788877 999999999987 5667666655
No 132
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=43.48 E-value=4.8 Score=38.97 Aligned_cols=14 Identities=36% Similarity=1.051 Sum_probs=13.2
Q ss_pred HhhhhchhhhcccC
Q 026956 191 ECILCACCSTSCPS 204 (230)
Q Consensus 191 ~CI~CG~C~saCP~ 204 (230)
-||.||.|+..||.
T Consensus 68 ~c~gc~~~~~~~p~ 81 (607)
T 3bk7_A 68 SCTGCGICVHKCPF 81 (607)
T ss_dssp TCCCCCHHHHHCSS
T ss_pred ccCccccccCCCCc
Confidence 79999999999995
No 133
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=42.08 E-value=45 Score=23.12 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=30.0
Q ss_pred ChhHHHHHHHhhhccCCCcccc-cCcCCCccCcceEEeCCeeecc---ccccccCCCCceEE
Q 026956 76 GPMVLDALIKIKSEIDPSLTFR-RSCREGICGSCAMNIDGCNGLA---CLTKISPSGSASTI 133 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr-~gCr~GiCGsCaV~ING~~~LA---C~t~v~~~~~~itI 133 (230)
+.||.++|..+.... |.+.-. --=..|.=..+.|.|||+.+-. =.+.+.++ ++|.|
T Consensus 24 ~~tv~~ll~~l~~~~-p~~~~~~l~~~~g~~~~v~v~vN~~~v~~~~~~~~~l~~g-D~V~i 83 (90)
T 2g1e_A 24 ISKISELLERLKVEY-GSEFTKQMYDGNNLFKNVIILVNGNNITSMKGLDTEIKDD-DKIDL 83 (90)
T ss_dssp CCBHHHHHHHHHHHS-CHHHHHHHCCSSCSTTTCEEEESSSBGGGTCSSSCBCCTT-CEEEE
T ss_pred CCcHHHHHHHHHHHC-cchhhhccccccCcCcceEEEECCEEccccCCCCcCCCCC-CEEEE
Confidence 679999999886432 322111 0001112245789999987641 23445544 44444
No 134
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=41.65 E-value=31 Score=26.52 Aligned_cols=66 Identities=20% Similarity=0.182 Sum_probs=35.5
Q ss_pred EEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeC-----Ce-eeccccccccC-CCCceEEeeCCC
Q 026956 66 KEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNID-----GC-NGLACLTKISP-SGSASTITPLPH 138 (230)
Q Consensus 66 ~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~IN-----G~-~~LAC~t~v~~-~~~~itIEPL~~ 138 (230)
|.=.|++.+ |+||-|+|..+.+.-. | .+-.|+|..- |+ ...+=.+-+.. .++++.||=|.+
T Consensus 29 QrT~V~Vrp-G~tlrdaL~KaLk~R~--L---------~pe~C~Vy~~~~~~~~~~~~i~WdtDi~~L~geEL~Ve~ld~ 96 (107)
T 1rrb_A 29 QRTVVNVRN-GMSLHDCLMKALKVRG--L---------QPECCAVFRLLQEHKGKKARLDWNTDAASLIGEELQVDFLKL 96 (107)
T ss_dssp CCEEEECCT-TCBHHHHHHHHHHHHT--C---------CTTTEEEEECCCSCSSSCEECCTTCBHHHHTTSEEEEEEC--
T ss_pred CeEEEEecC-CcCHHHHHHHHHHHcC--C---------CHHHceeEEccccCCCcccccchhhhhhhccCcEEEEEEccc
Confidence 445688888 9999999998652111 1 1234888733 32 23333333321 367899999999
Q ss_pred Cccee
Q 026956 139 MFVIK 143 (230)
Q Consensus 139 ~pvir 143 (230)
||.+.
T Consensus 97 ~p~~~ 101 (107)
T 1rrb_A 97 AAALE 101 (107)
T ss_dssp -----
T ss_pred Ccchh
Confidence 98765
No 135
>3dwg_C 9.5 kDa culture filtrate antigen CFP10A; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3dwm_A
Probab=41.35 E-value=66 Score=22.63 Aligned_cols=61 Identities=8% Similarity=0.088 Sum_probs=33.3
Q ss_pred ChhHHHHHHHhhhccCCCccccc-Cc--CCCccCcceEEeCCeeecc---ccccccCCCCceEEeeCC
Q 026956 76 GPMVLDALIKIKSEIDPSLTFRR-SC--REGICGSCAMNIDGCNGLA---CLTKISPSGSASTITPLP 137 (230)
Q Consensus 76 ~~TvLdaL~~i~~~~d~~l~fr~-gC--r~GiCGsCaV~ING~~~LA---C~t~v~~~~~~itIEPL~ 137 (230)
+.||-++|..+...+ |.+.-.- .. ...+=..+.|.|||+.+-. =.+.+.++.++.-+-|++
T Consensus 25 ~~Tv~~ll~~L~~~~-p~l~~~l~~~~~~g~~~~~~~v~VN~~~v~~~~~~~~~L~~gDeV~i~Ppv~ 91 (93)
T 3dwg_C 25 GDTLGAVISDLEANY-SGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVA 91 (93)
T ss_dssp CSBHHHHHHHHHHHS-TTHHHHHBCSSSTTSBCTTEEEEETTEEGGGTTGGGCBCCTTCEEEEEECCT
T ss_pred CCCHHHHHHHHHHHC-hhHHHHHhccccCCcccCCEEEEECCEEccCcCCCCcCCCCCCEEEEECCCC
Confidence 679999999987443 4332111 00 0011124899999997753 345566554443444443
No 136
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=39.69 E-value=7 Score=32.59 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=14.4
Q ss_pred HHHhh--hhchhhhcccCc
Q 026956 189 MYECI--LCACCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI--~CG~C~saCP~~ 205 (230)
...|| .||.|+.+||..
T Consensus 105 ~~~C~~~~C~~C~~~CP~~ 123 (214)
T 1h0h_B 105 PKTKDLEDYESVISACPYD 123 (214)
T ss_dssp GGGGGCSCHHHHHHHCTTC
T ss_pred HHHCccccccHHHHhcCCC
Confidence 45899 999999999975
No 137
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=39.50 E-value=43 Score=23.76 Aligned_cols=53 Identities=17% Similarity=0.261 Sum_probs=32.9
Q ss_pred EEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC
Q 026956 51 QIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP 126 (230)
Q Consensus 51 kI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~ 126 (230)
+|+-|-|+. +.++++ . |.|++|+...|..+ ....| .+.+|||+.+--- +.+.+
T Consensus 7 ~i~v~tP~G------~~~~lp--~-GaT~~D~A~~Ih~~------lg~~~-------v~AkVNG~~v~L~-~~L~~ 59 (78)
T 3hvz_A 7 EVFVFTPKG------DVISLP--I-GSTVIDFAYAIHSA------VGNRM-------IGAKVDGRIVPID-YKVKT 59 (78)
T ss_dssp EEEEECTTS------CEEEEE--T-TCBHHHHHHHHCHH------HHHTE-------EEEEETTEEECTT-CBCCT
T ss_pred eEEEECCCC------CEEEec--C-CCCHHHHHHHhhhh------hhcce-------EEEEECCEEcCCC-cccCC
Confidence 455666764 345555 5 88999999888532 22333 4679999876432 44444
No 138
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=38.19 E-value=6.4 Score=37.01 Aligned_cols=18 Identities=22% Similarity=0.573 Sum_probs=15.6
Q ss_pred cHHHhhhhchhhhcccCc
Q 026956 188 GMYECILCACCSTSCPSY 205 (230)
Q Consensus 188 ~~~~CI~CG~C~saCP~~ 205 (230)
+-..|+.||.|+.+||..
T Consensus 299 d~~~C~~Cg~Ci~~CP~a 316 (437)
T 3or1_A 299 DNKNCTRCMHCINTMPRA 316 (437)
T ss_dssp CGGGCCCCSHHHHHCTTT
T ss_pred ccccCCchhhhHhhCcHh
Confidence 456999999999999964
No 139
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=38.05 E-value=45 Score=31.06 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=39.2
Q ss_pred CceEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeec
Q 026956 45 TDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGL 118 (230)
Q Consensus 45 ~~~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~L 118 (230)
..+|+++|+ + ...+ ..++|.+.. |.+++++|....+. |-|.|.. .+-.=|-=--.|||...-
T Consensus 316 ~I~VtytV~--~---~~~~--~~~~Vtv~~-gssll~vLk~A~e~--~~F~F~~--~es~~G~fItSInG~~~~ 377 (414)
T 2bb6_A 316 FIDVLLKVS--G---ISPS--YRHSVSVPA-GSSLEDILKNAQEH--GRFRFRT--QASLSGPFLTSVLGRKAG 377 (414)
T ss_dssp EEEEEEEEE--S---SSSC--EEEEEEEET-TCCHHHHHHHHHHS--SSCCEEE--ECCTTSCEEEEETTEECC
T ss_pred eEEEEEEEe--e---CCCc--cceEEEecC-CCCHHHHHHHHHhc--cCCceEe--eecCCCceEEEECCCccC
Confidence 367888887 2 2234 445567766 89999999998854 5555554 232234445568887544
No 140
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=34.83 E-value=6.8 Score=33.85 Aligned_cols=16 Identities=31% Similarity=0.831 Sum_probs=14.2
Q ss_pred HHHhhhhchhhhcccC
Q 026956 189 MYECILCACCSTSCPS 204 (230)
Q Consensus 189 ~~~CI~CG~C~saCP~ 204 (230)
...|+.||.|+.+||.
T Consensus 200 ~~~C~~C~~C~~vCp~ 215 (265)
T 2pa8_D 200 ELSCTLCEECLRYCNG 215 (265)
T ss_dssp GGGCCCCCHHHHHHTT
T ss_pred cccCCCchHHHHhCCC
Confidence 3689999999999994
No 141
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=29.26 E-value=12 Score=30.56 Aligned_cols=18 Identities=28% Similarity=0.741 Sum_probs=15.4
Q ss_pred HHHhhhhc--hhhhcccCcc
Q 026956 189 MYECILCA--CCSTSCPSYW 206 (230)
Q Consensus 189 ~~~CI~CG--~C~saCP~~~ 206 (230)
...|+.|+ .|+.+||...
T Consensus 55 ~~~C~~C~~p~C~~~CP~gA 74 (195)
T 2vpz_B 55 PEQCLHCENPPCVPVCPTGA 74 (195)
T ss_dssp EEECCCCSSCTTTTTCSSSC
T ss_pred cccCcCccCcHHHHhcCCCc
Confidence 45899999 8999999854
No 142
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=29.24 E-value=13 Score=34.05 Aligned_cols=22 Identities=23% Similarity=0.619 Sum_probs=18.5
Q ss_pred HHhcHHHhhhhch--hhhcccCcc
Q 026956 185 KLDGMYECILCAC--CSTSCPSYW 206 (230)
Q Consensus 185 ~~~~~~~CI~CG~--C~saCP~~~ 206 (230)
.....+.|+.||. |..+||+..
T Consensus 15 ~~~~a~rc~~c~~~~C~~~CP~~~ 38 (456)
T 2vdc_G 15 ANEQANRCSQCGVPFCQVHCPVSN 38 (456)
T ss_dssp HHHHHHHSCCCSSCHHHHTSTTCC
T ss_pred HHHHHHhhhcCCCchhhcCCCCCC
Confidence 4556789999996 999999974
No 143
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=24.73 E-value=15 Score=31.97 Aligned_cols=18 Identities=28% Similarity=0.923 Sum_probs=15.4
Q ss_pred HHHhhhh----------c---hhhhcccCcc
Q 026956 189 MYECILC----------A---CCSTSCPSYW 206 (230)
Q Consensus 189 ~~~CI~C----------G---~C~saCP~~~ 206 (230)
...|+.| | .|+.+||.-.
T Consensus 123 ~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~A 153 (274)
T 1ti6_B 123 AQKCTMCAHLLDDESWAPKMPRCAHNCGSFV 153 (274)
T ss_dssp EECCCTTHHHHTCTTCTTCSCHHHHHCSSCC
T ss_pred cccCCCchhhhhhhccCCCCcchhhhCCcCc
Confidence 3589999 9 9999999864
No 144
>1v86_A DNA segment, CHR 7, wayne state university 128, expressed; ubiquitin fold, structural genomics, D7WSU128E protein; HET: DNA; NMR {Mus musculus} SCOP: d.15.1.1
Probab=23.86 E-value=1.6e+02 Score=20.74 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=24.4
Q ss_pred CCceEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhh
Q 026956 44 NTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKS 88 (230)
Q Consensus 44 ~~~~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~ 88 (230)
+..+++|+|. +. . +.|.+++++ +.||.++-..|.+
T Consensus 14 ~~~~~~i~Vk-~~-g-------~~~~i~v~~-~~TV~~LK~~I~~ 48 (95)
T 1v86_A 14 GKELVDLKII-WN-K-------TKHDVKVPL-DSTGSELKQKIHS 48 (95)
T ss_dssp CCCCEEEEEE-ET-T-------EEEEEEECT-TSBHHHHHHHHHH
T ss_pred CCceEEEEEE-EC-C-------EEEEEEECC-CCcHHHHHHHHHH
Confidence 3456677775 33 1 567788887 8899998888763
No 145
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=23.59 E-value=16 Score=33.18 Aligned_cols=19 Identities=26% Similarity=0.607 Sum_probs=16.1
Q ss_pred cHHHhhhhc--hhhhcccCcc
Q 026956 188 GMYECILCA--CCSTSCPSYW 206 (230)
Q Consensus 188 ~~~~CI~CG--~C~saCP~~~ 206 (230)
....|+.|+ .|+.+||...
T Consensus 147 ~~~~C~~C~~~~Cv~~CP~gA 167 (352)
T 2ivf_B 147 LARMCNHCTNPACLAACPTGA 167 (352)
T ss_dssp EEECCCCCSSCHHHHHCTTCC
T ss_pred CCCCCcCcCCccccccCCCCc
Confidence 356899999 9999999753
No 146
>1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1
Probab=22.81 E-value=1.1e+02 Score=22.69 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=31.4
Q ss_pred hhccCCccCCCCceEEEEEEeeCCCCCCCCceEEEEEeecCCChhHHHHHHHhhh
Q 026956 34 AQKVEPKASANTDTKKFQIYRWNPDSPSKPELKEFEINLKECGPMVLDALIKIKS 88 (230)
Q Consensus 34 ~~~~~~~~~~~~~~v~lkI~Rfdp~~d~~~~~~~y~v~v~~~~~TvLdaL~~i~~ 88 (230)
|.++.+-|+....+++|.|.--. + +++.+++++ ..||.++-..|.+
T Consensus 15 ~~~~~~~~~~~~~mm~I~VKtl~---G-----k~i~lev~p-~dTV~~lK~~Ia~ 60 (100)
T 1uh6_A 15 ASLVPRGSEGAATMIEVVCNDRL---G-----KKVRVKCNT-DDTIGDLKKLIAA 60 (100)
T ss_dssp CSSCCCCCSSCCCEEEEEEECSS---S-----SCEEEEEET-TSBHHHHHHHHHH
T ss_pred cccccccCCCCCCeEEEEEECCC---C-----CEEEEEeCC-CCcHHHHHHHHHH
Confidence 45566666666677777776321 1 446678877 7899999888864
No 147
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=22.72 E-value=45 Score=22.13 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=24.9
Q ss_pred EEEeecCCChhHHHHHHHhhhccCCCcccccCcCCCccCcceEEeCCeeeccccccccC
Q 026956 68 FEINLKECGPMVLDALIKIKSEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKISP 126 (230)
Q Consensus 68 y~v~v~~~~~TvLdaL~~i~~~~d~~l~fr~gCr~GiCGsCaV~ING~~~LAC~t~v~~ 126 (230)
++++ . +.|++|++..+... +. .. .-+++|||+.+-- .+.+.+
T Consensus 13 ~~~~--~-g~T~~dla~~i~~~----l~--~~-------~vaa~vNg~lvdl-~~~L~~ 54 (73)
T 2kmm_A 13 KRLP--Q-GATALDFAYSLHSD----LG--DH-------CIGAKVNHKLVPL-SYVLNS 54 (73)
T ss_dssp EEEC--T-TCBHHHHHHHHCSH----HH--HT-------EEEEEETTEECCT-TCBCCS
T ss_pred EEcC--C-CCcHHHHHHHHhhc----cc--cc-------eEEEEECCEEeCC-CcCcCC
Confidence 4444 5 79999999988421 11 11 2467999985522 244444
No 148
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=22.19 E-value=19 Score=34.50 Aligned_cols=17 Identities=35% Similarity=0.927 Sum_probs=15.1
Q ss_pred HHHhhhhc---------hhhhcccCc
Q 026956 189 MYECILCA---------CCSTSCPSY 205 (230)
Q Consensus 189 ~~~CI~CG---------~C~saCP~~ 205 (230)
...|+.|| .|+.+||..
T Consensus 241 ~~kC~~Cg~ri~~G~~P~Cv~~CP~~ 266 (512)
T 1q16_B 241 SEKCIFCYPRIEAGQPTVCSETCVGR 266 (512)
T ss_dssp EEECCTTHHHHTTTCCCHHHHTCTTC
T ss_pred cccCcCCCchhhcCCCCceEeeCchh
Confidence 56899999 999999964
No 149
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=21.44 E-value=21 Score=29.65 Aligned_cols=28 Identities=29% Similarity=0.629 Sum_probs=19.4
Q ss_pred HHHhhhh------c---hhhhcccCcccCCCCCcCHHHHH
Q 026956 189 MYECILC------A---CCSTSCPSYWWTSEAYLGPAALL 219 (230)
Q Consensus 189 ~~~CI~C------G---~C~saCP~~~~~~~~FlGPaal~ 219 (230)
...|+.| | .|+.+||.... .|.....+.
T Consensus 134 ~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai---~~~~~~~~~ 170 (214)
T 1h0h_B 134 MAKCDMCIDRITNGLRPACVTSCPTGAM---NFGDLSEME 170 (214)
T ss_dssp EECCCTTHHHHTTTCCCHHHHHCSSSCE---EEEEHHHHH
T ss_pred cCcCCCCcchhhcCCChhHHHhcCcccE---EEccHHHHH
Confidence 4579999 6 99999998643 244444443
Done!