Your job contains 1 sequence.
>026960
MSLTIPTNLSKPLLKPRSNSQLSHAKLSKQMITCSSSAGSEETSSSSGKAAKPLQAFSAA
LALSSILLSAPQPAVADISGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPALAIKA
TMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSY
LIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026960
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197515 - symbol:PSAF "AT1G31330" species:3702... 746 6.5e-74 1
UNIPROTKB|P12356 - symbol:PSAF "Photosystem I reaction ce... 434 7.5e-41 1
UNIPROTKB|P29256 - symbol:psaF "Photosystem I reaction ce... 303 5.3e-30 2
>TAIR|locus:2197515 [details] [associations]
symbol:PSAF "AT1G31330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009522 "photosystem I"
evidence=IEA] [GO:0009538 "photosystem I reaction center"
evidence=IEA;ISS] [GO:0015979 "photosynthesis" evidence=IEA;ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] InterPro:IPR003666 Pfam:PF02507
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
EMBL:AC007654 UniGene:At.68506 GO:GO:0009535 GO:GO:0010287
GO:GO:0015979 GO:GO:0009538 TCDB:5.B.4.1.1 EMBL:AJ245629
EMBL:AF360251 EMBL:AY048220 EMBL:AY051021 EMBL:AF424564
EMBL:AY062712 EMBL:AY094015 EMBL:BT000680 EMBL:BT002099
EMBL:AY052281 EMBL:AY088009 IPI:IPI00535877 RefSeq:NP_174418.1
UniGene:At.47610 HSSP:P0A402 ProteinModelPortal:Q9SHE8 SMR:Q9SHE8
STRING:Q9SHE8 PaxDb:Q9SHE8 PRIDE:Q9SHE8 EnsemblPlants:AT1G31330.1
GeneID:840021 KEGG:ath:AT1G31330 TAIR:At1g31330 eggNOG:NOG08121
HOGENOM:HOG000232623 InParanoid:Q9SHE8 KO:K02694 OMA:CAESARF
PhylomeDB:Q9SHE8 ProtClustDB:PLN00019 BioCyc:MetaCyc:MONOMER-1092
Genevestigator:Q9SHE8 Gene3D:1.10.8.110 SUPFAM:SSF81536
Uniprot:Q9SHE8
Length = 221
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 148/231 (64%), Positives = 164/231 (70%)
Query: 1 MSLTIPTNLSKPLLKPRSNSQLSHA-KLSKQMITCXXXXXXXXXXXXXXXXXXPLQAFXX 59
MSLTIP NL +L PRSN L+ + S C ++AF
Sbjct: 1 MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSSSTPQS-------MKAFSA 50
Query: 60 XXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPALAIK 119
P PAVADISGLTPCK+SKQFAKR YAP+SAPALA+
Sbjct: 51 AVALSSILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALN 110
Query: 120 ATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRS 179
A +EKTKRRFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPG+LFLYIAGWIGWVGRS
Sbjct: 111 AQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRS 170
Query: 180 YLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKDV 230
YLIAISGEKKPAMKEIIIDVPLASR++FRGF WPVAAYREF+NG+L+ KDV
Sbjct: 171 YLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221
>UNIPROTKB|P12356 [details] [associations]
symbol:PSAF "Photosystem I reaction center subunit III,
chloroplastic" species:3055 "Chlamydomonas reinhardtii" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003666 Pfam:PF02507
GO:GO:0009941 GO:GO:0009535 GO:GO:0010287 GO:GO:0015979
GO:GO:0009543 GO:GO:0009538 eggNOG:NOG08121 KO:K02694
ProtClustDB:PLN00019 Gene3D:1.10.8.110 SUPFAM:SSF81536 EMBL:X13495
EMBL:AF135791 PIR:S04133 RefSeq:XP_001696798.1 UniGene:Cre.13198
ProteinModelPortal:P12356 SMR:P12356 DIP:DIP-34986N IntAct:P12356
STRING:P12356 PRIDE:P12356 GeneID:5722300
KEGG:cre:CHLREDRAFT_130914 OMA:YVAGWIG
BioCyc:MetaCyc:CHLREDRAFT_130914-MONOMER Uniprot:P12356
Length = 227
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 90/178 (50%), Positives = 109/178 (61%)
Query: 56 AFXXXXXXXXXXXXXPQPAVADISGLTPCKESKQFAKRXXXXXXXXXXXXXXYAPDSAPA 115
A P A+ADI+GLTPC ESK +AK Y DSAPA
Sbjct: 42 ALAASALAAAVSLSAPSAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPA 101
Query: 116 LAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVS-G---DQRHWGEFITPGLLFLYIAG 171
+A+KATME+TK RF NY K GLLCG+DGLPHLI G H GE P FLY+AG
Sbjct: 102 VALKATMERTKARFANYAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAG 161
Query: 172 WIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 229
+IG+VGR YLIA+ GE KP KEIIIDVPLA++L ++G WP+AA +E G L+ K+
Sbjct: 162 YIGYVGRQYLIAVKGEAKPTDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219
>UNIPROTKB|P29256 [details] [associations]
symbol:psaF "Photosystem I reaction center subunit III"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0030094 "plasma membrane-derived photosystem I" evidence=IDA]
InterPro:IPR003666 Pfam:PF02507 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0015979 GO:GO:0030094 GO:GO:0009538
eggNOG:NOG08121 HOGENOM:HOG000232623 KO:K02694 Gene3D:1.10.8.110
SUPFAM:SSF81536 EMBL:M74801 EMBL:L20938 PIR:A41072
RefSeq:NP_441428.1 RefSeq:YP_005651486.1 ProteinModelPortal:P29256
SMR:P29256 IntAct:P29256 STRING:P29256 GeneID:12254136
GeneID:954786 KEGG:syn:sll0819 KEGG:syy:SYNGTS_1533 PATRIC:23840261
OMA:KFIERAS ProtClustDB:CLSK893118 BioCyc:MetaCyc:PSAF-MONOMER
Uniprot:P29256
Length = 165
Score = 303 (111.7 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 57/104 (54%), Positives = 73/104 (70%)
Query: 126 KRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGWVGRSYLIAIS 185
K R + Y LCG +G PHLIV G H G+F+ P +LFLYIAGWIGWVGRSYLI I
Sbjct: 56 KIRAERYAS--ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIR 113
Query: 186 GEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELVVKD 229
K P M+E++I+VPLA + + GF WP+AA E+ +G+LV+KD
Sbjct: 114 ESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKD 157
Score = 44 (20.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 71 PQPAVADISGLTPCKESKQF 90
P + D + LTPC E+ +
Sbjct: 19 PSASADDFANLTPCSENPAY 38
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 185 0.00080 110 3 11 22 0.42 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 591 (63 KB)
Total size of DFA: 153 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.11u 0.12s 13.23t Elapsed: 00:00:01
Total cpu time: 13.11u 0.12s 13.23t Elapsed: 00:00:01
Start: Thu May 9 16:18:06 2013 End: Thu May 9 16:18:07 2013