Query 026963
Match_columns 230
No_of_seqs 177 out of 1184
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 04:12:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026963.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026963hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 5.6E-24 4E-28 153.7 9.5 79 20-98 2-80 (82)
2 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 1.4E-23 9.9E-28 156.4 11.9 86 16-101 3-88 (93)
3 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 1.7E-23 1.3E-27 150.8 11.1 79 21-99 3-81 (82)
4 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 7.1E-24 5.2E-28 156.3 9.0 83 18-100 3-85 (89)
5 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 2.7E-23 2E-27 153.5 10.5 83 18-100 6-88 (90)
6 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 3.6E-23 2.7E-27 152.4 10.5 79 19-97 6-84 (88)
7 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 3.6E-23 2.6E-27 149.7 10.1 77 22-98 2-78 (80)
8 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 7E-23 5.1E-27 149.5 10.7 79 19-97 5-85 (85)
9 d1fxla2 d.58.7.1 (A:119-203) H 99.9 7.6E-23 5.5E-27 149.8 10.6 79 19-97 5-85 (85)
10 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 7.4E-23 5.4E-27 152.4 10.5 82 18-99 7-88 (93)
11 d2cpha1 d.58.7.1 (A:454-547) P 99.9 8.9E-23 6.5E-27 152.2 10.3 82 18-99 6-89 (94)
12 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 9.6E-23 7E-27 149.5 9.7 78 21-98 2-79 (85)
13 d2cqca1 d.58.7.1 (A:109-191) A 99.9 9.2E-23 6.7E-27 148.0 9.5 78 17-94 6-83 (83)
14 d1whwa_ d.58.7.1 (A:) Probable 99.9 1.7E-22 1.2E-26 151.2 11.0 81 18-98 6-86 (99)
15 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 8E-23 5.8E-27 154.1 9.2 80 20-99 8-87 (104)
16 d2cpza1 d.58.7.1 (A:383-484) C 99.9 1.5E-22 1.1E-26 152.9 10.5 81 18-98 16-96 (102)
17 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 1E-22 7.5E-27 149.6 9.2 83 17-99 2-84 (90)
18 d2f9da1 d.58.7.1 (A:12-125) Pr 99.9 2.2E-22 1.6E-26 153.4 10.7 78 18-98 5-82 (114)
19 d2cpfa1 d.58.7.1 (A:362-446) P 99.9 2.8E-22 2E-26 145.8 9.0 77 23-99 1-80 (85)
20 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 2.5E-22 1.8E-26 145.5 8.6 77 23-99 1-78 (83)
21 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 3.4E-22 2.5E-26 157.4 10.1 81 18-98 40-120 (139)
22 d2cpxa1 d.58.7.1 (A:291-392) R 99.9 7.2E-23 5.3E-27 153.0 5.2 86 14-99 12-97 (102)
23 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 5.5E-22 4E-26 143.0 9.5 75 22-97 2-76 (78)
24 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 8.3E-22 6.1E-26 146.6 10.6 82 18-101 6-87 (90)
25 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 4.7E-22 3.4E-26 143.4 8.6 79 21-99 2-80 (81)
26 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 1.4E-21 1E-25 144.1 10.7 80 17-98 5-84 (90)
27 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 2E-21 1.5E-25 142.3 10.1 78 19-97 5-82 (84)
28 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 2E-21 1.5E-25 147.3 9.8 77 20-97 18-94 (101)
29 d1cvja2 d.58.7.1 (A:91-179) Po 99.8 1.5E-21 1.1E-25 143.7 8.6 78 19-98 7-84 (89)
30 d2cq3a1 d.58.7.1 (A:110-202) R 99.8 5.9E-21 4.3E-25 141.7 11.8 79 19-99 10-88 (93)
31 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 4.5E-21 3.3E-25 137.3 10.7 77 20-97 2-78 (79)
32 d2cpea1 d.58.7.1 (A:353-453) R 99.8 2.9E-21 2.1E-25 143.7 9.9 84 18-101 6-97 (101)
33 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 1.8E-21 1.3E-25 142.7 8.6 79 19-98 3-83 (86)
34 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 4.6E-21 3.4E-25 141.6 10.8 82 18-99 6-93 (98)
35 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.1E-21 8.3E-26 141.9 7.2 75 22-97 2-76 (77)
36 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 4.2E-21 3E-25 145.2 9.9 77 21-98 11-87 (103)
37 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 3.2E-21 2.3E-25 138.3 8.4 75 22-97 1-75 (75)
38 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 1.6E-21 1.1E-25 144.1 6.7 85 19-109 2-90 (91)
39 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 6.5E-21 4.7E-25 145.1 10.0 80 19-99 19-98 (103)
40 d2msta_ d.58.7.1 (A:) Neural R 99.8 4.5E-21 3.3E-25 135.6 8.2 75 22-97 1-75 (75)
41 d2cpia1 d.58.7.1 (A:101-189) E 99.8 4.9E-21 3.6E-25 141.6 8.0 77 19-95 7-89 (89)
42 d1whxa_ d.58.7.1 (A:) Probable 99.8 4.6E-21 3.3E-25 144.5 7.9 74 20-99 10-83 (111)
43 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.8 1.6E-20 1.2E-24 139.6 10.5 79 18-99 12-90 (95)
44 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.8 2.2E-20 1.6E-24 135.7 10.1 77 17-98 5-82 (83)
45 d2adca1 d.58.7.1 (A:335-443) P 99.8 1.4E-20 1E-24 141.6 8.9 74 20-98 2-76 (109)
46 d2cpja1 d.58.7.1 (A:65-150) No 99.8 1.7E-20 1.3E-24 137.7 9.0 77 19-101 7-83 (86)
47 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 1.3E-20 9.3E-25 141.8 8.2 80 18-98 16-95 (101)
48 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 8.2E-21 6E-25 137.0 6.5 75 22-97 1-75 (75)
49 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 2.6E-20 1.9E-24 139.5 9.5 75 19-99 17-91 (96)
50 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 4.9E-20 3.6E-24 135.0 10.7 78 19-98 5-82 (85)
51 d2adca2 d.58.7.1 (A:444-531) P 99.8 5.1E-20 3.7E-24 134.7 10.0 79 16-98 6-85 (88)
52 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 7.1E-21 5.2E-25 134.3 5.2 71 23-93 1-71 (72)
53 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 7.9E-20 5.8E-24 135.8 8.8 79 21-99 2-84 (96)
54 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 1E-19 7.3E-24 131.3 9.0 73 18-98 3-75 (79)
55 d2cpda1 d.58.7.1 (A:223-308) A 99.8 1.9E-19 1.4E-23 131.1 9.9 75 19-99 7-81 (86)
56 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 7.2E-20 5.2E-24 133.1 7.7 77 21-97 10-86 (86)
57 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 1.3E-20 9.5E-25 140.0 3.1 78 19-98 12-89 (91)
58 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.7E-19 1.2E-23 135.7 9.0 73 18-98 13-86 (98)
59 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.7E-19 1.2E-23 132.9 8.7 75 18-99 3-77 (88)
60 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 5.6E-20 4.1E-24 133.1 5.5 73 21-99 2-75 (80)
61 d1whya_ d.58.7.1 (A:) Putative 99.8 3.6E-19 2.6E-23 132.9 10.0 78 15-98 12-91 (97)
62 d2cpya1 d.58.7.1 (A:536-638) R 99.8 2.5E-19 1.8E-23 134.4 9.0 82 15-97 3-84 (103)
63 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 1.6E-19 1.2E-23 134.4 7.8 77 18-99 14-90 (96)
64 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 6.4E-19 4.7E-23 128.9 10.6 77 17-99 5-83 (88)
65 d2adba1 d.58.7.1 (A:177-284) P 99.8 2.2E-19 1.6E-23 136.2 8.2 76 19-98 6-83 (108)
66 d3begb1 d.58.7.1 (B:121-207) S 99.8 1.3E-19 9.6E-24 132.8 6.2 70 22-98 2-71 (87)
67 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 4.5E-19 3.3E-23 133.0 9.0 78 19-98 14-92 (104)
68 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 9.2E-19 6.7E-23 125.6 9.5 70 23-99 1-70 (75)
69 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 9.3E-19 6.7E-23 125.6 9.2 74 21-97 1-74 (75)
70 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 7.9E-19 5.7E-23 129.9 8.9 77 17-99 5-84 (89)
71 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 3.5E-19 2.5E-23 130.8 6.7 75 18-99 3-77 (88)
72 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 1.6E-18 1.1E-22 130.7 10.2 80 18-98 13-92 (104)
73 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 1.4E-18 1.1E-22 130.6 9.4 81 14-100 12-95 (99)
74 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 2.4E-18 1.7E-22 129.8 10.5 77 16-98 11-89 (104)
75 d1wg4a_ d.58.7.1 (A:) Splicing 99.7 1.2E-18 9E-23 130.9 8.3 73 19-98 14-86 (98)
76 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 7.1E-18 5.2E-22 135.0 12.0 79 18-97 95-173 (183)
77 d1wela1 d.58.7.1 (A:412-523) R 99.7 2.8E-18 2E-22 131.2 8.7 79 18-97 16-94 (112)
78 d1weza_ d.58.7.1 (A:) Heteroge 99.7 4.7E-18 3.4E-22 127.8 9.1 78 18-98 13-90 (102)
79 d1weya_ d.58.7.1 (A:) Calcipre 99.7 3.9E-18 2.9E-22 129.9 6.9 75 18-98 3-82 (104)
80 d1jmta_ d.58.7.3 (A:) d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.90 E-value=5.6e-24 Score=153.72 Aligned_cols=79 Identities=28% Similarity=0.364 Sum_probs=76.9
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+++|||+|||..+++++|.++|++||+|.+|+++.++.++.++|||||+|.+.++|..|++.|||..+.|++|+|+||+
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999995
No 2
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.4e-23 Score=156.42 Aligned_cols=86 Identities=16% Similarity=0.202 Sum_probs=81.5
Q ss_pred ccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEE
Q 026963 16 VCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVS 95 (230)
Q Consensus 16 v~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vs 95 (230)
+..+|.+|||+|||+.+++++|+++|++||+|.+|.++.++.++.++|||||+|.+.++|..|++.|||..+.|++|+|+
T Consensus 3 ~~~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~ 82 (93)
T d1h2vz_ 3 LLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTD 82 (93)
T ss_dssp TTTTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEE
T ss_pred ccCCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCC
Q 026963 96 YASQFE 101 (230)
Q Consensus 96 yA~e~E 101 (230)
||+..+
T Consensus 83 ~a~~~~ 88 (93)
T d1h2vz_ 83 WDAGFK 88 (93)
T ss_dssp EESCCC
T ss_pred EcCCCC
Confidence 997543
No 3
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.7e-23 Score=150.82 Aligned_cols=79 Identities=25% Similarity=0.344 Sum_probs=76.4
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
++|||+|||..+++++|+++|++||+|.+|+++.+..++.++|||||.|.+.++|..|++.|||..|.|++|+|+||++
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999954
No 4
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=7.1e-24 Score=156.33 Aligned_cols=83 Identities=20% Similarity=0.291 Sum_probs=79.3
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+++|||+|||+.+++++|+++|++||+|.+|.++.|+.++.++|||||.|.+.++|..|+..|||..|.|++|+|+||
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 026963 98 SQF 100 (230)
Q Consensus 98 ~e~ 100 (230)
.+.
T Consensus 83 ~p~ 85 (89)
T d2cqba1 83 KPM 85 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 5
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.7e-23 Score=153.45 Aligned_cols=83 Identities=22% Similarity=0.232 Sum_probs=79.2
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
+++.+|||+|||..+++++|+++|++||+|.+|.++.|+.++.++|||||.|.+.++|..|++.|||..|.|++|+|+||
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 026963 98 SQF 100 (230)
Q Consensus 98 ~e~ 100 (230)
.+.
T Consensus 86 kp~ 88 (90)
T d2cq0a1 86 KPS 88 (90)
T ss_dssp SCC
T ss_pred eCC
Confidence 543
No 6
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.89 E-value=3.6e-23 Score=152.42 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=76.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
++.+|||+|||..+++++|.++|++||+|.+|+++.|+.+++++|||||+|.+.++|+.|+..|||..+.|++|+|+||
T Consensus 6 ~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 6 EGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp -CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999999
No 7
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=3.6e-23 Score=149.74 Aligned_cols=77 Identities=14% Similarity=0.120 Sum_probs=75.4
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+|||+|||+.+++++|.++|++||+|.+|+|+.|+.|++++|||||+|.++++|..|++.|||+.+.|++|+|.||.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999993
No 8
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=7e-23 Score=149.53 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=76.1
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCC--ceeEEEe
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLG--NRLKVSY 96 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~G--r~L~Vsy 96 (230)
.+++|||+|||+.+++++|+++|++||+|.+|+++.++.+++++|||||+|.+.++|..|++.|||..+.| ++|+|.|
T Consensus 5 ~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~~ 84 (85)
T d1b7fa2 5 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRL 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEEE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999987 8899999
Q ss_pred c
Q 026963 97 A 97 (230)
Q Consensus 97 A 97 (230)
|
T Consensus 85 A 85 (85)
T d1b7fa2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 8
No 9
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=7.6e-23 Score=149.81 Aligned_cols=79 Identities=24% Similarity=0.280 Sum_probs=75.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCC--ceeEEEe
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLG--NRLKVSY 96 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~G--r~L~Vsy 96 (230)
.+++|||+|||..+++++|+++|++||+|.+|+++.|+.++.++|||||+|.+.++|..|++.|||..+.| ++|+|.|
T Consensus 5 k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~ 84 (85)
T d1fxla2 5 RDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKF 84 (85)
T ss_dssp TTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEe
Confidence 46789999999999999999999999999999999999999999999999999999999999999999998 5699999
Q ss_pred c
Q 026963 97 A 97 (230)
Q Consensus 97 A 97 (230)
|
T Consensus 85 A 85 (85)
T d1fxla2 85 A 85 (85)
T ss_dssp C
T ss_pred C
Confidence 7
No 10
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=7.4e-23 Score=152.38 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=78.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
++.++|||+|||..++++||+++|++||+|.+|+++.++.|+.++|||||+|.+.++|..|++.|||..|.|++|+|.||
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 44679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 026963 98 SQ 99 (230)
Q Consensus 98 ~e 99 (230)
.+
T Consensus 87 ~~ 88 (93)
T d1x5ua1 87 SA 88 (93)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 11
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.88 E-value=8.9e-23 Score=152.21 Aligned_cols=82 Identities=21% Similarity=0.366 Sum_probs=76.9
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCC-CCCceeEEEEEEccHhHHHHHHHHh-cCceeCCceeEEE
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAED-CDPFTDVYFIKFRLFSNARFAKRKL-DEFVFLGNRLKVS 95 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~-tgksrG~AFV~F~d~edA~~A~~~L-nG~~f~Gr~L~Vs 95 (230)
.++++|||+|||+.+++++|+++|++||+|.+|+++.++. +|.++|||||.|.+.++|..|++.| ||..|.|++|+|+
T Consensus 6 ~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~ 85 (94)
T d2cpha1 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLE 85 (94)
T ss_dssp SCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEE
Confidence 4678899999999999999999999999999999998754 7999999999999999999999998 8999999999999
Q ss_pred ecCC
Q 026963 96 YASQ 99 (230)
Q Consensus 96 yA~e 99 (230)
||..
T Consensus 86 ~A~~ 89 (94)
T d2cpha1 86 WADS 89 (94)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9954
No 12
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=9.6e-23 Score=149.49 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=76.0
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
..|||+|||+.+++++|.++|++||+|.+|+++.|+.||.++|||||+|.++++|..|++.|||+.+.|++|.|.||.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~ 79 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRAS 79 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999999995
No 13
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=9.2e-23 Score=148.03 Aligned_cols=78 Identities=22% Similarity=0.304 Sum_probs=75.0
Q ss_pred cCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEE
Q 026963 17 CDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKV 94 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~V 94 (230)
++++++|||+|||+.+++++|+++|++||+|.+|.++.++.+++++|||||+|.+.++|..|++.|||+.|.|++|+|
T Consensus 6 p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 6 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 346789999999999999999999999999999999999999999999999999999999999999999999999987
No 14
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=1.7e-22 Score=151.23 Aligned_cols=81 Identities=28% Similarity=0.308 Sum_probs=77.8
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+.+|||+|||+.++++||+++|++||+|.+|.++.|+.|+.++|||||+|.+.++|..|++.|||+.|.|++|+|.+|
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 86 ~ 86 (99)
T d1whwa_ 86 T 86 (99)
T ss_dssp C
T ss_pred C
Confidence 4
No 15
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=8e-23 Score=154.06 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=77.1
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
.++|||+|||+.+++++|+++|++||+|.+|.++.++.|++++|||||+|.+.++|..|++.|||..|.|++|+|.||..
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999943
No 16
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.5e-22 Score=152.95 Aligned_cols=81 Identities=21% Similarity=0.287 Sum_probs=78.2
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++.+|||+|||+.++++||+++|++||+|.+|.++.+..++.++|||||+|.+.++|..|++.|||+.|.|++|+|+||
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 96 ~ 96 (102)
T d2cpza1 96 R 96 (102)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1e-22 Score=149.57 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=79.3
Q ss_pred cCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEe
Q 026963 17 CDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSY 96 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vsy 96 (230)
+.++++|||+|||+.++++||.++|++||+|..|.++.+..++.++|||||.|.+.++|..|++.|||+.|.|++|+|.+
T Consensus 2 ~~~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 81 (90)
T d1x5sa1 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ 81 (90)
T ss_dssp CCCCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 026963 97 ASQ 99 (230)
Q Consensus 97 A~e 99 (230)
|.+
T Consensus 82 a~~ 84 (90)
T d1x5sa1 82 AGK 84 (90)
T ss_dssp EEC
T ss_pred cCC
Confidence 953
No 18
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.2e-22 Score=153.37 Aligned_cols=78 Identities=21% Similarity=0.344 Sum_probs=73.6
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+++|||+|||..+++++|+++|++||+|.+|.+..+ +.++|||||+|.+.++|..|++.|||+.|.|++|+|.||
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 45789999999999999999999999999999999876 567899999999999999999999999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 82 ~ 82 (114)
T d2f9da1 82 N 82 (114)
T ss_dssp C
T ss_pred C
Confidence 5
No 19
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=2.8e-22 Score=145.81 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=72.8
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCC---CceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 23 LIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCD---PFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 23 LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tg---ksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
|||+|||+.+++++|+++|++||+|.+|.++.++.++ .++|||||+|.+.++|..|++.|||+.+.|++|+|.||..
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999999999887765 5799999999999999999999999999999999999943
No 20
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=2.5e-22 Score=145.51 Aligned_cols=77 Identities=22% Similarity=0.266 Sum_probs=73.4
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcceEE-EeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 23 LIVRNVPSLGCGDDLLKLFATYGDIEEC-KPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 23 LyV~NLP~~~teedL~~LFS~fG~I~~v-~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
|||+|||+.++++||+++|++||+|.++ .++.++.|++++|||||+|.+.++|..|++.|||..|.|++|+|+||.+
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~ 78 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 78 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecC
Confidence 8999999999999999999999999775 7899999999999999999999999999999999999999999999953
No 21
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.86 E-value=3.4e-22 Score=157.37 Aligned_cols=81 Identities=33% Similarity=0.399 Sum_probs=77.7
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
+.+++|||+|||+.+++++|+++|++||+|.+|.++.++.|+.++|||||+|.+.++|..|++.|||+.|.|++|+|.||
T Consensus 40 ~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a 119 (139)
T d1u6fa1 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALA 119 (139)
T ss_dssp TTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 120 ~ 120 (139)
T d1u6fa1 120 A 120 (139)
T ss_dssp S
T ss_pred C
Confidence 3
No 22
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=7.2e-23 Score=153.02 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=81.9
Q ss_pred eeccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeE
Q 026963 14 YTVCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLK 93 (230)
Q Consensus 14 ytv~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~ 93 (230)
|+...++++|||+|||..+++++|+++|++||.|..+.++.+..+++++|||||.|.+.++|..|++.|||..|.|++|+
T Consensus 12 ~~~~~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 91 (102)
T d2cpxa1 12 YNPGEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILV 91 (102)
T ss_dssp CCCCSCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCE
T ss_pred CCCCCCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEE
Confidence 66677899999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred EEecCC
Q 026963 94 VSYASQ 99 (230)
Q Consensus 94 VsyA~e 99 (230)
|+||.+
T Consensus 92 V~~ak~ 97 (102)
T d2cpxa1 92 IEFGKN 97 (102)
T ss_dssp EEECCC
T ss_pred EEeCCC
Confidence 999954
No 23
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=5.5e-22 Score=143.04 Aligned_cols=75 Identities=16% Similarity=0.198 Sum_probs=72.9
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.|||+|||+.++++||+++|++||+|.+|+++.++ +++++|||||+|.+.++|..|++.|||+.+.|++|+|++|
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a 76 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV 76 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 59999999999999999999999999999999985 7999999999999999999999999999999999999999
No 24
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8.3e-22 Score=146.63 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=76.0
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++++|||+|||+.+++++|+++|++||+|.+|+|+.|+.|+.++|||||.|.+.++|..|++.+ +.+.|+.|+|.+|
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEEEeC
Confidence 45788999999999999999999999999999999999999999999999999999999999854 5899999999999
Q ss_pred CCCC
Q 026963 98 SQFE 101 (230)
Q Consensus 98 ~e~E 101 (230)
.+.+
T Consensus 84 ~~k~ 87 (90)
T d2cqga1 84 NSKQ 87 (90)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 5443
No 25
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.86 E-value=4.7e-22 Score=143.40 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=69.2
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
.+|||+|||+.++++||+++|++||+|..+.++.+..+++++|||||+|.+.++|..|++.|||+.|.|++|+|.||.+
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 4899999999999999999999999999999988888999999999999999999999999999999999999999943
No 26
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.4e-21 Score=144.10 Aligned_cols=80 Identities=24% Similarity=0.346 Sum_probs=74.9
Q ss_pred cCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEe
Q 026963 17 CDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSY 96 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vsy 96 (230)
..++++|||+|||..+++++|+++|++||+|.+|+++.++.++ +|||||+|.+.++|..|++.|||..|.|++|+|.|
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~--~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~ 82 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSN--DPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNW 82 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSS--CCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCcc--ceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 3567899999999999999999999999999999999987654 89999999999999999999999999999999999
Q ss_pred cC
Q 026963 97 AS 98 (230)
Q Consensus 97 A~ 98 (230)
|.
T Consensus 83 a~ 84 (90)
T d2cqia1 83 AT 84 (90)
T ss_dssp CC
T ss_pred cC
Confidence 93
No 27
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2e-21 Score=142.28 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=74.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
+.++|||+|||+.+++++|.++|++||+|.+|.++.|+.|+.++|||||+|.+.++|..|++ ++|+.|.|+.|+|..|
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 34689999999999999999999999999999999999999999999999999999999997 5999999999999988
No 28
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2e-21 Score=147.29 Aligned_cols=77 Identities=14% Similarity=0.241 Sum_probs=74.9
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++|||+|||+.+++++|+++|++||+|.+|.++.+..||+++|||||+|.+.++|..|+. |||..|.|++|+|.+|
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a 94 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQAS 94 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEEC
Confidence 5789999999999999999999999999999999999999999999999999999999995 9999999999999998
No 29
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.5e-21 Score=143.73 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=73.3
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
...+|||+|||+.+++++|+++|++||+|.+|.++.+.. .++|||||+|.+.++|..|++.|||..|.|++|.|+||.
T Consensus 7 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~--~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 7 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDEN--GSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFK 84 (89)
T ss_dssp TTTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTT--BCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecC--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 356899999999999999999999999999999998864 478999999999999999999999999999999999994
No 30
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=5.9e-21 Score=141.74 Aligned_cols=79 Identities=25% Similarity=0.333 Sum_probs=74.1
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+.++|||+|||+.+++++|+++|++||+|.+|.++.++. .++|||||.|.+.++|..|++.|||..|.|++|+|.||.
T Consensus 10 ~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 10 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 467899999999999999999999999999999998864 479999999999999999999999999999999999995
Q ss_pred C
Q 026963 99 Q 99 (230)
Q Consensus 99 e 99 (230)
+
T Consensus 88 ~ 88 (93)
T d2cq3a1 88 A 88 (93)
T ss_dssp S
T ss_pred c
Confidence 4
No 31
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.5e-21 Score=137.35 Aligned_cols=77 Identities=17% Similarity=0.163 Sum_probs=73.6
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++|||+|||+.++++||+++|++||+|..+.++.++.++.++|||||.|.+.++|..|+. |||+.|.|++|+|..|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 3689999999999999999999999999999999999999999999999999999999985 8999999999999987
No 32
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=2.9e-21 Score=143.71 Aligned_cols=84 Identities=19% Similarity=0.167 Sum_probs=77.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcce--------EEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCC
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIE--------ECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLG 89 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~--------~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~G 89 (230)
.++++|||+|||..+++++|.++|++||+|. .+.+..++.+++++|||||+|.+.++|..|++.|||+.|.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 4578999999999999999999999999984 56777888899999999999999999999999999999999
Q ss_pred ceeEEEecCCCC
Q 026963 90 NRLKVSYASQFE 101 (230)
Q Consensus 90 r~L~VsyA~e~E 101 (230)
++|+|+||.+.+
T Consensus 86 r~i~V~~a~~~~ 97 (101)
T d2cpea1 86 SKLKVSLARKKP 97 (101)
T ss_dssp EECEEECSSCCC
T ss_pred EEEEEEEcCCCC
Confidence 999999995433
No 33
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=1.8e-21 Score=142.70 Aligned_cols=79 Identities=20% Similarity=0.240 Sum_probs=69.8
Q ss_pred CCCeEEEcCCCCCCCH-HHHHHhhccCCcceEEEeecC-CCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEe
Q 026963 19 ESRYLIVRNVPSLGCG-DDLLKLFATYGDIEECKPMDA-EDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSY 96 (230)
Q Consensus 19 eS~~LyV~NLP~~~te-edL~~LFS~fG~I~~v~il~d-~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vsy 96 (230)
++++|||+|||+.+++ ++|+++|++||+|++|.++.+ ..+++++|||||+|.+.++|..|++ |||+.|.|++|+|+|
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 6889999999998765 569999999999999998764 5789999999999999999999995 999999999999999
Q ss_pred cC
Q 026963 97 AS 98 (230)
Q Consensus 97 A~ 98 (230)
|.
T Consensus 82 a~ 83 (86)
T d2ghpa3 82 AD 83 (86)
T ss_dssp CC
T ss_pred cC
Confidence 93
No 34
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=4.6e-21 Score=141.60 Aligned_cols=82 Identities=18% Similarity=0.240 Sum_probs=77.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhc------CceeCCce
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLD------EFVFLGNR 91 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~Ln------G~~f~Gr~ 91 (230)
+++++|||+|||+.+++++|+++|++||+|.++.++.+..++.++|||||+|.+.++|..|++.|| |..+.|++
T Consensus 6 ~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~ 85 (98)
T d1x4ha1 6 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQ 85 (98)
T ss_dssp CCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCE
T ss_pred CCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEE
Confidence 467899999999999999999999999999999999999999999999999999999999999987 78899999
Q ss_pred eEEEecCC
Q 026963 92 LKVSYASQ 99 (230)
Q Consensus 92 L~VsyA~e 99 (230)
|+|+||.+
T Consensus 86 l~v~~a~~ 93 (98)
T d1x4ha1 86 LKVDLAVT 93 (98)
T ss_dssp EEEECCCC
T ss_pred EEEEECCC
Confidence 99999943
No 35
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.1e-21 Score=141.88 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=72.8
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.|||+|||+.+++++|.++|++||+|.+|+++.|+.|++++|||||+|.+.++|..|+. +||+.+.|++|+|..|
T Consensus 2 klfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 2 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999997 6999999999999987
No 36
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.2e-21 Score=145.20 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=74.1
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
++|||+|||+.++++||+++|++||+|.+|+++.|+.|++++|||||.|.+.++|..|++.+|+ .|.|++|+|.+|.
T Consensus 11 ~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a~ 87 (103)
T d2cqda1 11 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLAY 87 (103)
T ss_dssp SEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEEST
T ss_pred cEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEcC
Confidence 5799999999999999999999999999999999999999999999999999999999999987 7999999999993
No 37
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.2e-21 Score=138.27 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=71.9
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.|||+|||+.+++++|.++|++||+|.+|.++.++.|++++|||||.|.+.++|..|++ +++..+.|+.|+|..|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 48999999999999999999999999999999999999999999999999999999997 7999999999999765
No 38
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-21 Score=144.12 Aligned_cols=85 Identities=21% Similarity=0.330 Sum_probs=74.9
Q ss_pred CCCeEEEcCCCCCCCHHHHH----HhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEE
Q 026963 19 ESRYLIVRNVPSLGCGDDLL----KLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKV 94 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~----~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~V 94 (230)
|+++|||+|||+.++++||. ++|++||+|.+|++..+ +.++|||||+|++.++|..|++.|||..|.|++|+|
T Consensus 2 P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~---~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v 78 (91)
T d1nu4a_ 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRS---LKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRI 78 (91)
T ss_dssp CCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHH---HHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeee---ccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEE
Confidence 68999999999999998875 56999999999998654 678999999999999999999999999999999999
Q ss_pred EecCCCCChHHHHHH
Q 026963 95 SYASQFESLADTKDK 109 (230)
Q Consensus 95 syA~e~Es~~d~r~K 109 (230)
.|| ++.++...|
T Consensus 79 ~~a---k~~~~~~~k 90 (91)
T d1nu4a_ 79 QYA---KTDSDIIAK 90 (91)
T ss_dssp EEC---SSCCTHHHH
T ss_pred EEe---CCCchhhcc
Confidence 999 455544433
No 39
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=6.5e-21 Score=145.10 Aligned_cols=80 Identities=14% Similarity=0.212 Sum_probs=75.8
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+.++|||+|||+.++++||+++|++||+|.++.|+.|+.|+.++|||||.|.+.++|..|++ ++|+.|.|++|+|.+|.
T Consensus 19 ~~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 19 QFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HHTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 34789999999999999999999999999999999999999999999999999999999995 79999999999999995
Q ss_pred C
Q 026963 99 Q 99 (230)
Q Consensus 99 e 99 (230)
+
T Consensus 98 ~ 98 (103)
T d1x4ba1 98 A 98 (103)
T ss_dssp S
T ss_pred c
Confidence 4
No 40
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4.5e-21 Score=135.61 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=72.6
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.|||+|||..++++||.++|++||+|..+.++.++.++.++|||||+|.+.++|..|++ |||+.|.|++|+|.+|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 48999999999999999999999999999999999999999999999999999999996 9999999999999987
No 41
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4.9e-21 Score=141.55 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=70.7
Q ss_pred CCCeEEEcCCCCCCCHHHH---HHhhccCCcceEEEeecCCCCCCc---eeEEEEEEccHhHHHHHHHHhcCceeCCcee
Q 026963 19 ESRYLIVRNVPSLGCGDDL---LKLFATYGDIEECKPMDAEDCDPF---TDVYFIKFRLFSNARFAKRKLDEFVFLGNRL 92 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL---~~LFS~fG~I~~v~il~d~~tgks---rG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L 92 (230)
+.++|||+|||+.++++|| +++|++||+|.+|.++.++.++.+ +|||||+|.+.++|..|++.|||+.|.|++|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3567999999999999999 778999999999999998877544 5999999999999999999999999999999
Q ss_pred EEE
Q 026963 93 KVS 95 (230)
Q Consensus 93 ~Vs 95 (230)
+|+
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 986
No 42
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=4.6e-21 Score=144.54 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=69.4
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
+++|||+|||+.+++++|.++|++||+|..|.|.. .+|||||+|.+.++|..|++.|||..|.|++|+|+||+.
T Consensus 10 ~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~ 83 (111)
T d1whxa_ 10 KTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPI 83 (111)
T ss_dssp EEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEET
T ss_pred CCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCC
Confidence 46899999999999999999999999999999854 469999999999999999999999999999999999964
No 43
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-20 Score=139.61 Aligned_cols=79 Identities=22% Similarity=0.283 Sum_probs=73.2
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
+++.+|||+|||..++++||+++|++||+|..+.+..+ +.++|||||.|++.++|..|++.|||+.|.|++|+|+||
T Consensus 12 ~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a 88 (95)
T d1x4aa1 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 88 (95)
T ss_dssp CCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEec
Confidence 45678999999999999999999999999999998765 567899999999999999999999999999999999999
Q ss_pred CC
Q 026963 98 SQ 99 (230)
Q Consensus 98 ~e 99 (230)
.+
T Consensus 89 ~~ 90 (95)
T d1x4aa1 89 RS 90 (95)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 44
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.82 E-value=2.2e-20 Score=135.74 Aligned_cols=77 Identities=21% Similarity=0.314 Sum_probs=71.2
Q ss_pred cCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeC-CceeEEE
Q 026963 17 CDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFL-GNRLKVS 95 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~-Gr~L~Vs 95 (230)
..|+++|||+|||..+++++|.++|++||+|.+|+++.+ .+|||||.|.+.++|..|++.|||+.|. |++|+|+
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~ 79 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKIT 79 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEE
Confidence 457899999999999999999999999999999999865 3689999999999999999999999995 6899999
Q ss_pred ecC
Q 026963 96 YAS 98 (230)
Q Consensus 96 yA~ 98 (230)
||.
T Consensus 80 ~ak 82 (83)
T d2b0ga1 80 FAK 82 (83)
T ss_dssp ECC
T ss_pred Eec
Confidence 993
No 45
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.4e-20 Score=141.63 Aligned_cols=74 Identities=19% Similarity=0.340 Sum_probs=69.2
Q ss_pred CCeEEEcCCCC-CCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 20 SRYLIVRNVPS-LGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 20 S~~LyV~NLP~-~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
|++|||+|||+ .+++++|+++|++||+|++|.++.++ +|||||+|+++++|..|++.|||..|.|++|+|+||.
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 67999999965 58899999999999999999999873 6999999999999999999999999999999999993
No 46
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=1.7e-20 Score=137.74 Aligned_cols=77 Identities=27% Similarity=0.390 Sum_probs=71.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+..+|||+|||..++++||+++|++||+|.+|.+..+ +|||||+|++.++|..|++.|||..|.|++|+|+||+
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~ 80 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFAC 80 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 3457999999999999999999999999999999866 5899999999999999999999999999999999996
Q ss_pred CCC
Q 026963 99 QFE 101 (230)
Q Consensus 99 e~E 101 (230)
...
T Consensus 81 ~~~ 83 (86)
T d2cpja1 81 HSA 83 (86)
T ss_dssp CCS
T ss_pred CcC
Confidence 543
No 47
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.3e-20 Score=141.82 Aligned_cols=80 Identities=9% Similarity=0.103 Sum_probs=74.8
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++++|||+|||..+++++|+++|++||+|..+.++.+ .++.++|||||+|.+.++|..|++.|||..|.|++|.|.++
T Consensus 16 ~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~-~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecc-cccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 35678999999999999999999999999999999887 47899999999999999999999999999999999999877
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 95 ~ 95 (101)
T d1x5oa1 95 E 95 (101)
T ss_dssp S
T ss_pred C
Confidence 3
No 48
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=8.2e-21 Score=137.04 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=71.6
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.|||+|||+.+++++|.++|++||+|.+|.++.++.|++++|||||+|.+.++|..|++. +++.+.|+.|+|.+|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 489999999999999999999999999999999999999999999999999999999975 788999999999876
No 49
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=2.6e-20 Score=139.54 Aligned_cols=75 Identities=15% Similarity=0.228 Sum_probs=70.7
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
++++|||+|||..+++++|+++|++||+|.+|+++.+ +|||||+|.+.++|..|+..|||..|.|++|+|+||.
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak 90 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGK 90 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3568999999999999999999999999999999976 6899999999999999999999999999999999995
Q ss_pred C
Q 026963 99 Q 99 (230)
Q Consensus 99 e 99 (230)
+
T Consensus 91 ~ 91 (96)
T d1x4ga1 91 E 91 (96)
T ss_dssp C
T ss_pred C
Confidence 3
No 50
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.9e-20 Score=135.04 Aligned_cols=78 Identities=13% Similarity=0.206 Sum_probs=73.2
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+.++|||+|||..+++++|.++|++||+|.+|.++.+. ++.++|||||+|.+.++|..|++ ++|..|.|++|.|.|+.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 46799999999999999999999999999999998874 79999999999999999999996 79999999999999984
No 51
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.1e-20 Score=134.67 Aligned_cols=79 Identities=20% Similarity=0.226 Sum_probs=71.9
Q ss_pred ccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCcee-CCceeEE
Q 026963 16 VCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVF-LGNRLKV 94 (230)
Q Consensus 16 v~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f-~Gr~L~V 94 (230)
+..|+++|||+|||..+++++|.++|++||.|.++.+... +.+|||||+|++.++|..|+..|||+.+ .|++|+|
T Consensus 6 ~~pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~----~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v 81 (88)
T d2adca2 6 IFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQ----KDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRV 81 (88)
T ss_dssp CCCSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECS----SSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeee----cccceeEEEECCHHHHHHHHHhccCCEecCCCEEEE
Confidence 4467899999999999999999999999999999887654 4578999999999999999999999998 5899999
Q ss_pred EecC
Q 026963 95 SYAS 98 (230)
Q Consensus 95 syA~ 98 (230)
+||.
T Consensus 82 ~~sk 85 (88)
T d2adca2 82 SFSK 85 (88)
T ss_dssp EECS
T ss_pred EeCC
Confidence 9994
No 52
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=7.1e-21 Score=134.32 Aligned_cols=71 Identities=24% Similarity=0.249 Sum_probs=69.0
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeE
Q 026963 23 LIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLK 93 (230)
Q Consensus 23 LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~ 93 (230)
|||+|||..+++++|.++|++||+|..++++.++.++.++|+|||+|.+.++|..|+..|||+.|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999874
No 53
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=7.9e-20 Score=135.83 Aligned_cols=79 Identities=18% Similarity=0.285 Sum_probs=71.4
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCc-ceEEEeecCC-CCCCceeEEEEEEccHhHHHHHHHHhcCc--eeCCceeEEEe
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGD-IEECKPMDAE-DCDPFTDVYFIKFRLFSNARFAKRKLDEF--VFLGNRLKVSY 96 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~-I~~v~il~d~-~tgksrG~AFV~F~d~edA~~A~~~LnG~--~f~Gr~L~Vsy 96 (230)
..|||+|||..+++++|+++|++||+ |.++.++.+. .+++++|||||+|.+.++|..|++.|++. .+.|++|+|+|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 47999999999999999999999997 8999999875 56899999999999999999999999754 55799999999
Q ss_pred cCC
Q 026963 97 ASQ 99 (230)
Q Consensus 97 A~e 99 (230)
|.+
T Consensus 82 A~p 84 (96)
T d2disa1 82 AEP 84 (96)
T ss_dssp SCS
T ss_pred cCC
Confidence 944
No 54
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1e-19 Score=131.31 Aligned_cols=73 Identities=19% Similarity=0.184 Sum_probs=68.3
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++++|||+|+| +++++|+++|++||+|.+|.+..+ +|||||+|.+.++|..|++.|||..+.|++|+|+||
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 74 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIA 74 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 467899999997 799999999999999999999765 589999999999999999999999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 75 ~ 75 (79)
T d2bz2a1 75 R 75 (79)
T ss_dssp C
T ss_pred c
Confidence 4
No 55
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.9e-19 Score=131.11 Aligned_cols=75 Identities=21% Similarity=0.184 Sum_probs=69.4
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
..++|||+|||+.++++||+++|++||.|..+.+. .++|||||.|.+.++|..|+..|||..+.|++|+|+||.
T Consensus 7 ~~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~------~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~ak 80 (86)
T d2cpda1 7 SVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAK 80 (86)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEE------ECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEc------cccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEecc
Confidence 45789999999999999999999999999988764 357999999999999999999999999999999999995
Q ss_pred C
Q 026963 99 Q 99 (230)
Q Consensus 99 e 99 (230)
+
T Consensus 81 P 81 (86)
T d2cpda1 81 P 81 (86)
T ss_dssp C
T ss_pred C
Confidence 4
No 56
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=7.2e-20 Score=133.11 Aligned_cols=77 Identities=18% Similarity=0.172 Sum_probs=70.6
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..|||+|||+.++++||+++|+.||.|..+.++.+..++.++|+|||.|.+.++|..|++.|||+.+.|++|+|++|
T Consensus 10 ~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 10 TIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp EEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 35999999999999999999999999987544444578999999999999999999999999999999999999986
No 57
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.79 E-value=1.3e-20 Score=139.96 Aligned_cols=78 Identities=13% Similarity=0.125 Sum_probs=72.9
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
++.+|||+|||+.+++++|+++|++||+|..|.++.+ .+|+++|||||.|.+.++|..|++ |||..+.|++|+|++|.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 4568999999999999999999999999999998755 679999999999999999999996 99999999999999993
No 58
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.7e-19 Score=135.74 Aligned_cols=73 Identities=22% Similarity=0.338 Sum_probs=66.6
Q ss_pred CCCCeEEEcCCCC-CCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEe
Q 026963 18 DESRYLIVRNVPS-LGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSY 96 (230)
Q Consensus 18 ~eS~~LyV~NLP~-~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vsy 96 (230)
..+.+|||+|||+ .++++||+++|++||+|.+|.+ ++|||||+|++.++|..|++.|||+.|.|++|+|+|
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~ 84 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINL 84 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEE
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 3466899999974 5677899999999999999998 369999999999999999999999999999999999
Q ss_pred cC
Q 026963 97 AS 98 (230)
Q Consensus 97 A~ 98 (230)
|.
T Consensus 85 a~ 86 (98)
T d1wf2a_ 85 AA 86 (98)
T ss_dssp TT
T ss_pred CC
Confidence 94
No 59
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=1.7e-19 Score=132.90 Aligned_cols=75 Identities=20% Similarity=0.312 Sum_probs=66.5
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+++|||+|||+.++++||+++|++|| +..+.+ +.++|||||+|.+.++|+.|++.|||+.|.|++|+|+||
T Consensus 3 s~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a 75 (88)
T d1wg1a_ 3 SGSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQ 75 (88)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 3577999999999999999999999999 333333 346799999999999999999999999999999999999
Q ss_pred CC
Q 026963 98 SQ 99 (230)
Q Consensus 98 ~e 99 (230)
+.
T Consensus 76 ~~ 77 (88)
T d1wg1a_ 76 PT 77 (88)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 60
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=5.6e-20 Score=133.13 Aligned_cols=73 Identities=19% Similarity=0.146 Sum_probs=66.8
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCc-eeCCceeEEEecCC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEF-VFLGNRLKVSYASQ 99 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~-~f~Gr~L~VsyA~e 99 (230)
.+|||+|||+.+++++|+++|++||.|.++.++. ++|||||+|.+.++|..|++.|||. .+.|++|+|+||.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 4699999999999999999999999998777664 4699999999999999999999996 69999999999954
No 61
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=3.6e-19 Score=132.89 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=71.7
Q ss_pred eccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCC--cee
Q 026963 15 TVCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLG--NRL 92 (230)
Q Consensus 15 tv~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~G--r~L 92 (230)
-...++++|||+|||+.+++++|+++|++||+|..|.+..+ +|||||+|.+.++|..|++.|||..|.| ++|
T Consensus 12 g~~~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l 85 (97)
T d1whya_ 12 GKANPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRL 85 (97)
T ss_dssp CCCCCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBC
T ss_pred CCCCCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEE
Confidence 34567899999999999999999999999999999999765 5899999999999999999999999987 489
Q ss_pred EEEecC
Q 026963 93 KVSYAS 98 (230)
Q Consensus 93 ~VsyA~ 98 (230)
+|+||.
T Consensus 86 ~v~~ak 91 (97)
T d1whya_ 86 RVDFAK 91 (97)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 999995
No 62
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.5e-19 Score=134.45 Aligned_cols=82 Identities=16% Similarity=0.104 Sum_probs=74.6
Q ss_pred eccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEE
Q 026963 15 TVCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKV 94 (230)
Q Consensus 15 tv~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~V 94 (230)
+|+....+|||+|||+.++++||.++|+.||.|..+.++.+..+|.++|+|||+|.+.++|..|++ |||+.|.|+.|.|
T Consensus 3 dv~~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V 81 (103)
T d2cpya1 3 DVNSAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFV 81 (103)
T ss_dssp SCCSCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEE
T ss_pred CCCCCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEE
Confidence 356677899999999999999999999999999876555555789999999999999999999996 9999999999999
Q ss_pred Eec
Q 026963 95 SYA 97 (230)
Q Consensus 95 syA 97 (230)
.++
T Consensus 82 ~~~ 84 (103)
T d2cpya1 82 HVV 84 (103)
T ss_dssp EEE
T ss_pred EEC
Confidence 998
No 63
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.78 E-value=1.6e-19 Score=134.36 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=70.6
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++++|||+|||+.++++||+++|++||+|..+. .++.++|||||+|.+.++|..|++.|||..|.|++|+|.||
T Consensus 14 ~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~-----~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a 88 (96)
T d1fjca_ 14 RAARTLLAKNLSFNITEDELKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYT 88 (96)
T ss_dssp TGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEE-----ETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcccceeee-----ecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 3568999999999999999999999999987664 24789999999999999999999999999999999999999
Q ss_pred CC
Q 026963 98 SQ 99 (230)
Q Consensus 98 ~e 99 (230)
.+
T Consensus 89 ~~ 90 (96)
T d1fjca_ 89 GE 90 (96)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 64
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.4e-19 Score=128.95 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=70.5
Q ss_pred cCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHh--cCceeCCceeEE
Q 026963 17 CDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKL--DEFVFLGNRLKV 94 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~L--nG~~f~Gr~L~V 94 (230)
..||++|||+|||..+++++|+++|++||.|.++.++.+ +|+|||+|.+.++|..|++.| ++..+.|++|+|
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v 78 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYI 78 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEE
Confidence 458999999999999999999999999999999998865 489999999999999999965 677999999999
Q ss_pred EecCC
Q 026963 95 SYASQ 99 (230)
Q Consensus 95 syA~e 99 (230)
.||..
T Consensus 79 ~~sk~ 83 (88)
T d2cq1a1 79 QYSNH 83 (88)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 99953
No 65
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.2e-19 Score=136.17 Aligned_cols=76 Identities=17% Similarity=0.164 Sum_probs=69.5
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeC--CceeEEEe
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFL--GNRLKVSY 96 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~--Gr~L~Vsy 96 (230)
+..+|||+|||+.+++++|+++|++||+|.+|.++.+ +.+|+|||+|.++++|..|++.|||..++ |..|+|.|
T Consensus 6 ~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~----~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~ 81 (108)
T d2adba1 6 PVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK----NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDF 81 (108)
T ss_dssp CEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEE----TTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEE
T ss_pred CeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEee----CCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEe
Confidence 3457899999999999999999999999999999876 35899999999999999999999999995 67899999
Q ss_pred cC
Q 026963 97 AS 98 (230)
Q Consensus 97 A~ 98 (230)
+.
T Consensus 82 s~ 83 (108)
T d2adba1 82 SK 83 (108)
T ss_dssp CS
T ss_pred cC
Confidence 94
No 66
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1.3e-19 Score=132.82 Aligned_cols=70 Identities=21% Similarity=0.294 Sum_probs=66.9
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
.|||+|||+.++++||+++|++||+|.+|.+..+ |||||+|.+.++|..|++.|||..|.|+.|+|.|+.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~ 71 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIR 71 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEe
Confidence 5999999999999999999999999999998765 899999999999999999999999999999999983
No 67
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=4.5e-19 Score=133.00 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=70.0
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCC-CCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAE-DCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~-~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
++.+|||+|||+.++++||+++|+.|| |.++.++.+. .++.++|||||+|.+.++|+.|+ .|||+.|.|+.|+|.||
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 567899999999999999999999999 6777776654 57899999999999999998666 69999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 92 ~ 92 (104)
T d1wi8a_ 92 D 92 (104)
T ss_dssp C
T ss_pred C
Confidence 4
No 68
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=9.2e-19 Score=125.59 Aligned_cols=70 Identities=16% Similarity=0.287 Sum_probs=63.8
Q ss_pred EEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecCC
Q 026963 23 LIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYASQ 99 (230)
Q Consensus 23 LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~e 99 (230)
|||+|||..++++||+++|++|| +..+.+ ++++|||||.|.+.++|..|++.|||+.|.|++|+|+|||.
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~ 70 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPT 70 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCS
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCC
Confidence 79999999999999999999999 555554 35679999999999999999999999999999999999953
No 69
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.76 E-value=9.3e-19 Score=125.57 Aligned_cols=74 Identities=22% Similarity=0.163 Sum_probs=68.4
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
++|||+|||+.+++++|+++|++||+|.+|.++.++.+ .+|||||+|.+.++|..|+ .|||+.|.|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al-~~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAI-TKTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHH-TTTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHH-HhcCcEECCEEEEEEEC
Confidence 57999999999999999999999999999999988753 4689999999999999998 58999999999999865
No 70
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.76 E-value=7.9e-19 Score=129.89 Aligned_cols=77 Identities=16% Similarity=0.237 Sum_probs=69.4
Q ss_pred cCCCCeEEEcCCCCC-CCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHh--cCceeCCceeE
Q 026963 17 CDESRYLIVRNVPSL-GCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKL--DEFVFLGNRLK 93 (230)
Q Consensus 17 ~~eS~~LyV~NLP~~-~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~L--nG~~f~Gr~L~ 93 (230)
.++|++|||+|||.. +|++||.+||++||+|.+|.++.+ +++|||+|++.++|..|++.| ++..+.|++|+
T Consensus 5 ~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~------k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~ 78 (89)
T d1x4da1 5 VETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNK------INEAFIEMATTEDAQAAVDYYTTTPALVFGKPVR 78 (89)
T ss_dssp CCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSS------SSCEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeecc------ceEEEEEEcchhhHHHHHHHHhhCCCccCCceEE
Confidence 357899999999985 678999999999999999999876 479999999999999999966 68889999999
Q ss_pred EEecCC
Q 026963 94 VSYASQ 99 (230)
Q Consensus 94 VsyA~e 99 (230)
|+||..
T Consensus 79 V~~s~~ 84 (89)
T d1x4da1 79 VHLSQK 84 (89)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 999953
No 71
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.5e-19 Score=130.81 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=68.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+++|||+|||+.++++||+++|++||+|.+|+++. .++|||||+|.+.++|+.|+. +++.|.|++|+|.+|
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 4578999999999999999999999999999998764 467999999999999999985 899999999999999
Q ss_pred CC
Q 026963 98 SQ 99 (230)
Q Consensus 98 ~e 99 (230)
.+
T Consensus 76 ~~ 77 (88)
T d1wf0a_ 76 EP 77 (88)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 72
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.6e-18 Score=130.66 Aligned_cols=80 Identities=11% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++.+|||+|||+.++++||+++|+.||.|..+.++.+..++.++|||||.|.+.++|..|++ +|+..|.|+.|+|.++
T Consensus 13 ~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~ 91 (104)
T d1wg5a_ 13 ANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKS 91 (104)
T ss_dssp SCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEE
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEEC
Confidence 356689999999999999999999999999987777777889999999999999999999996 9999999999999999
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 92 ~ 92 (104)
T d1wg5a_ 92 S 92 (104)
T ss_dssp C
T ss_pred C
Confidence 4
No 73
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.4e-18 Score=130.56 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=71.8
Q ss_pred eeccCCCCeEEEcCCCCC-CCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHH--HhcCceeCCc
Q 026963 14 YTVCDESRYLIVRNVPSL-GCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKR--KLDEFVFLGN 90 (230)
Q Consensus 14 ytv~~eS~~LyV~NLP~~-~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~--~LnG~~f~Gr 90 (230)
-....++++|||+|||.. +++++|.++|++||+|.+|.++.+ +|+|||+|.+.++|..|++ .+++..|.|+
T Consensus 12 ~~~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr 85 (99)
T d1x4fa1 12 DQKQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGR 85 (99)
T ss_dssp CCSSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSS
T ss_pred ccCCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCE
Confidence 334567889999999975 789999999999999999999865 5899999999999999998 5788899999
Q ss_pred eeEEEecCCC
Q 026963 91 RLKVSYASQF 100 (230)
Q Consensus 91 ~L~VsyA~e~ 100 (230)
+|+|+||+..
T Consensus 86 ~l~V~~s~~~ 95 (99)
T d1x4fa1 86 CVKVDLSEKY 95 (99)
T ss_dssp CCEEEEECSC
T ss_pred EEEEEEcCCc
Confidence 9999999543
No 74
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=2.4e-18 Score=129.80 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=69.8
Q ss_pred ccCCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhc--CceeCCceeE
Q 026963 16 VCDESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLD--EFVFLGNRLK 93 (230)
Q Consensus 16 v~~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~Ln--G~~f~Gr~L~ 93 (230)
...+|++|||+|||+.++++||+++|++||+|.+|.+..+ +|+|||+|++.++|+.|++.|+ +..+.|++|+
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~ 84 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAF 84 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCE
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEE
Confidence 4467999999999999999999999999999999999764 5899999999999999999884 5567899999
Q ss_pred EEecC
Q 026963 94 VSYAS 98 (230)
Q Consensus 94 VsyA~ 98 (230)
|+||.
T Consensus 85 v~~s~ 89 (104)
T d1wexa_ 85 FNYST 89 (104)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99994
No 75
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.2e-18 Score=130.91 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=68.7
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
...+|||+|||+.++++||+++|++||+|+.|.+.. +|||||+|.+.++|..|++.|||..|.|+.|+|.|+.
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~ 86 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIR 86 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEe
Confidence 456899999999999999999999999999999875 3899999999999999999999999999999999984
No 76
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=7.1e-18 Score=135.00 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=75.8
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
..+++|||+|||+.+++++|.++|+.||+|..+.++.+..++.++|||||.|.+.++|..|+. ++|..+.|++|+|.+|
T Consensus 95 ~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~~A 173 (183)
T d1u1qa_ 95 LTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 173 (183)
T ss_dssp CCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEEEC
T ss_pred cccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEec
Confidence 456899999999999999999999999999999999999999999999999999999999997 7999999999999999
No 77
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=2.8e-18 Score=131.23 Aligned_cols=79 Identities=11% Similarity=0.098 Sum_probs=72.7
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.+..+|||+|||+.++++||.++|+.||.|..+.++.+..+|.++|+|||.|.+.++|..|+. |||..|.|+.|.|..+
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 356689999999999999999999999999887666666789999999999999999999996 9999999999999998
No 78
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=4.7e-18 Score=127.76 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=70.4
Q ss_pred CCCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 18 DESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.++.+|||+|||+.++++||+++|+.||. .+|.++.+. ++.++|||||+|.+.++|+.|++ |||+.|.|+.|+|.++
T Consensus 13 ~~~~~v~v~nLp~~~te~dl~~~F~~~~~-~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s 89 (102)
T d1weza_ 13 TTGHCVHMRGLPYRATENDIYNFFSPLNP-MRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLN 89 (102)
T ss_dssp SSSCEEEEESCCTTCCHHHHHHSSCSCCC-SEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHhccCc-ceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEc
Confidence 45668999999999999999999999985 567777775 48999999999999999999986 8999999999999998
Q ss_pred C
Q 026963 98 S 98 (230)
Q Consensus 98 ~ 98 (230)
.
T Consensus 90 ~ 90 (102)
T d1weza_ 90 S 90 (102)
T ss_dssp C
T ss_pred C
Confidence 4
No 79
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.71 E-value=3.9e-18 Score=129.87 Aligned_cols=75 Identities=23% Similarity=0.193 Sum_probs=67.5
Q ss_pred CCCCeEEEcCCCCCC-CH----HHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCcee
Q 026963 18 DESRYLIVRNVPSLG-CG----DDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRL 92 (230)
Q Consensus 18 ~eS~~LyV~NLP~~~-te----edL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L 92 (230)
..+.+|||+||+..+ ++ ++|+++|++||+|++|.+++. +|+|||.|.+.++|..|++.|||+.|.|++|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFKS------FKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEETT------TTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEecC------CCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 357899999999865 32 569999999999999999854 6899999999999999999999999999999
Q ss_pred EEEecC
Q 026963 93 KVSYAS 98 (230)
Q Consensus 93 ~VsyA~ 98 (230)
+|.||.
T Consensus 77 ~v~~a~ 82 (104)
T d1weya_ 77 KLYFAQ 82 (104)
T ss_dssp EEECCC
T ss_pred EEeecc
Confidence 999994
No 80
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=6.9e-19 Score=134.13 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=71.5
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+.++|++++...++++|.++|++||+|++|+|+++ .++.++|+|||+|.+.++|..|+..|||+.|.|++|+|+|.|
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~-~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~sP 104 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN-LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCS-SSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEECC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecC-CCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEECC
Confidence 35778888877888999999999999999999877 579999999999999999999999999999999999999986
No 81
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.2e-19 Score=130.86 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=70.7
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeec-----CCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEE
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMD-----AEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVS 95 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~-----d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~Vs 95 (230)
++|||+|||..++++||.++|++||.|..+.+.. +..++.++|||||.|.+.++|..|+. |||+.|.|++|+|.
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 6899999999999999999999999998877643 44678899999999999999999985 99999999999998
Q ss_pred ecCCC
Q 026963 96 YASQF 100 (230)
Q Consensus 96 yA~e~ 100 (230)
.+.++
T Consensus 81 r~k~~ 85 (90)
T d1u2fa_ 81 RPHDY 85 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 76544
No 82
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.4e-16 Score=120.46 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=66.7
Q ss_pred eccCCCCeEEEcC--CCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeC-Cc-
Q 026963 15 TVCDESRYLIVRN--VPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFL-GN- 90 (230)
Q Consensus 15 tv~~eS~~LyV~N--LP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~-Gr- 90 (230)
+.+.++++|+|.| ||..+++++|+++|++||+|++|.++.+ +|||||+|.+.++|..|++.|||+.+. |.
T Consensus 13 ~~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i~~~~~ 86 (101)
T d2cq2a1 13 TVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEVVDDLG 86 (101)
T ss_dssp CCSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEEECTTS
T ss_pred cCCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCCCCCCC
Confidence 4567889999966 9999999999999999999999998865 589999999999999999999999884 32
Q ss_pred ---eeEEEec
Q 026963 91 ---RLKVSYA 97 (230)
Q Consensus 91 ---~L~VsyA 97 (230)
++.++|.
T Consensus 87 ~~i~~~~~~~ 96 (101)
T d2cq2a1 87 QKITLYLNFV 96 (101)
T ss_dssp CEEECEEEEE
T ss_pred cEEEEEEEee
Confidence 4555666
No 83
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.7e-18 Score=138.69 Aligned_cols=159 Identities=11% Similarity=0.100 Sum_probs=109.6
Q ss_pred CCCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEecC
Q 026963 19 ESRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 19 eS~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
+.++|||+|||+.+++++|+++|++||+|.++.++.+..++.++|||||.|.+.++|..|+..+ +..+.++.+.+....
T Consensus 5 ~~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~-~~~~~~~~~~~~~~~ 83 (183)
T d1u1qa_ 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR-PHKVDGRVVEPKRAV 83 (183)
T ss_dssp HHHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC-SCEETTEECEEEECC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhc-CCcccccchhhhhhh
Confidence 3579999999999999999999999999999999999999999999999999999999998865 556777888887663
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhh-cCCCCCCCcccccc-cCCCCCCCCCCCCcchhhhhhhhcccccccccccccCCCC
Q 026963 99 QFESLADTKDKLETRRKEVLARLN-SGRSKVPNIHSSVD-LGEPSLVTAPLQPNLVSEQITSWQRASSESQRISHVNESP 176 (230)
Q Consensus 99 e~Es~~d~r~Kl~~rr~ev~~Rl~-~n~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (230)
..+.......... ..++- .|+|...++...++ +...| .+.++.++.-+-+...++ .+|..|....++.
T Consensus 84 ~~~~~~~~~~~~~------~~~i~V~~lp~~~te~~L~~~f~~~G---~v~~~~i~~~~~~~~~~g-~~fV~f~~~e~A~ 153 (183)
T d1u1qa_ 84 SREDSQRPGAHLT------VKKIFVGGIKEDTEEHHLRDYFEQYG---KIEVIEIMTDRGSGKKRG-FAFVTFDDHDSVD 153 (183)
T ss_dssp CTTGGGSTTTTCC------CSEEEEECCCTTCCHHHHHHHHGGGS---CEEEEEEEECTTTCCEEE-EEEEEESCHHHHH
T ss_pred hcccccccccccc------cceeEEccCCCcCCHHHHhhhhccCC---ceeeeeeecccccCccce-eEEEEECCHHHHH
Confidence 2221110000000 01111 46677776666666 66666 344444443333445566 5777777776666
Q ss_pred ceeeccCcccccc
Q 026963 177 ITRVSSDKDYFAS 189 (230)
Q Consensus 177 ~~~~~~~~~~~~~ 189 (230)
-+. .++...|.|
T Consensus 154 ~Al-~~~~~~~~G 165 (183)
T d1u1qa_ 154 KIV-IQKYHTVNG 165 (183)
T ss_dssp HHH-TSSCEEETT
T ss_pred HHH-HhCCCeECC
Confidence 553 455555554
No 84
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=3.5e-16 Score=119.87 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=65.3
Q ss_pred eEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccH-hHHHHHHHHhcCceeCCceeEEEecC
Q 026963 22 YLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLF-SNARFAKRKLDEFVFLGNRLKVSYAS 98 (230)
Q Consensus 22 ~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~-edA~~A~~~LnG~~f~Gr~L~VsyA~ 98 (230)
.+||+|||+.+++++|+++|++||+|..|.++.+ +|||||.|.+. ++|..|+..|||..+.++.+.|.++.
T Consensus 13 ~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~ 84 (113)
T d1owxa_ 13 LKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEV 84 (113)
T ss_dssp EEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEee
Confidence 4699999999999999999999999999999865 69999999996 78999999999999999998888873
No 85
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.3e-15 Score=114.38 Aligned_cols=77 Identities=22% Similarity=0.257 Sum_probs=67.8
Q ss_pred CCCCeEEEcCC--CCCC---------CHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCce
Q 026963 18 DESRYLIVRNV--PSLG---------CGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFV 86 (230)
Q Consensus 18 ~eS~~LyV~NL--P~~~---------teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~ 86 (230)
..+++|+|+|| |... .++||++.|++||+|.+|.+..+ .++|+|||+|.+.++|..|+..|||..
T Consensus 6 ~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~----~~~G~~fV~f~~~e~A~~A~~~lng~~ 81 (99)
T d2dita1 6 RHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDR----HPDGVASVSFRDPEEADYCIQTLDGRW 81 (99)
T ss_dssp CSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETT----CTTCEEEEECSCHHHHHHHHHHSTTCE
T ss_pred CCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCC----CCccEEEEEECCHHHHHHHHHHhCCcE
Confidence 46889999998 5432 23789999999999999998765 467999999999999999999999999
Q ss_pred eCCceeEEEecC
Q 026963 87 FLGNRLKVSYAS 98 (230)
Q Consensus 87 f~Gr~L~VsyA~ 98 (230)
|.|++|+|+|+.
T Consensus 82 ~~gr~i~v~~~~ 93 (99)
T d2dita1 82 FGGRQITAQAWD 93 (99)
T ss_dssp ETTEECEEEECC
T ss_pred ECCEEEEEEEeC
Confidence 999999999984
No 86
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.8e-15 Score=113.23 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=70.6
Q ss_pred CCCCeEEEcCC--CCCCC--------HHHHHHhhccCCcceEEEeecCCCCC--CceeEEEEEEccHhHHHHHHHHhcCc
Q 026963 18 DESRYLIVRNV--PSLGC--------GDDLLKLFATYGDIEECKPMDAEDCD--PFTDVYFIKFRLFSNARFAKRKLDEF 85 (230)
Q Consensus 18 ~eS~~LyV~NL--P~~~t--------eedL~~LFS~fG~I~~v~il~d~~tg--ksrG~AFV~F~d~edA~~A~~~LnG~ 85 (230)
.||+.|.|+|+ |.... .+||++.|++||+|++|.|+++.++. ...|++||.|.+.++|..|+..|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 47899999999 55432 26789999999999999998876553 45699999999999999999999999
Q ss_pred eeCCceeEEEecC
Q 026963 86 VFLGNRLKVSYAS 98 (230)
Q Consensus 86 ~f~Gr~L~VsyA~ 98 (230)
.|.|++|+|.|++
T Consensus 82 ~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 82 KFANRVVVTKYCD 94 (104)
T ss_dssp CSSSSCCEEEEEC
T ss_pred EECCeEEEEEEcC
Confidence 9999999999994
No 87
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.41 E-value=1.8e-13 Score=99.84 Aligned_cols=70 Identities=21% Similarity=0.236 Sum_probs=60.1
Q ss_pred CCeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCce-eEEEec
Q 026963 20 SRYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNR-LKVSYA 97 (230)
Q Consensus 20 S~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~-L~VsyA 97 (230)
...|+|.++|+..++ ++..+|++||+|.++.+.. .+|||||.|.+.++|.+|++ +||..|.|+. +.|..+
T Consensus 4 ~~wV~V~G~p~~~~~-~il~~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 4 DTWVTVFGFPQASAS-YILLQFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGEEEEECCCGGGHH-HHHHHHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred ccEEEEECCChHHHH-HHHHHHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 467999999987665 5556899999999998754 36999999999999999995 9999999985 568877
No 88
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.73 E-value=0.00011 Score=54.25 Aligned_cols=79 Identities=15% Similarity=0.265 Sum_probs=64.6
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCC--CceeEEEEEEccHhHHHHHHHHhcCceeCCc-----eeE
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCD--PFTDVYFIKFRLFSNARFAKRKLDEFVFLGN-----RLK 93 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tg--ksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr-----~L~ 93 (230)
+.|.||.||+..+++++.+.++..|++.-..-.....+. ..-.-|+|.|.+.++...-.+..||+.|.+. +-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a~ 81 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAI 81 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEECE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeeeE
Confidence 468999999999999999999999999876555543321 2225799999999999999999999999753 457
Q ss_pred EEecCC
Q 026963 94 VSYASQ 99 (230)
Q Consensus 94 VsyA~e 99 (230)
|+|||-
T Consensus 82 VE~AP~ 87 (91)
T d1uw4a_ 82 VEFAPF 87 (91)
T ss_dssp EEECSS
T ss_pred EEEcCc
Confidence 999973
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62 E-value=3.2e-05 Score=55.24 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=53.4
Q ss_pred HHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCCceeEEEec
Q 026963 34 GDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLGNRLKVSYA 97 (230)
Q Consensus 34 eedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~Gr~L~VsyA 97 (230)
.+-|...|+++|+|.++.+...-+ + .-.|-|...+.++|..|+..|+-+.+.++.|.|+|+
T Consensus 10 qq~L~~~f~~h~~V~sv~l~~~~d-g--~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~ 70 (73)
T d2dgxa1 10 QQLLQEAFARHGKVKSVELSPHTD-Y--QLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLA 70 (73)
T ss_dssp HHHHHHHHHHHSCEEEEEECSCCS-T--TCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred HHHHHHHHHhheeEEEEEEEeccC-C--cEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 356889999999999999865422 3 346999999999999999999999999999999998
No 90
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.11 E-value=0.00035 Score=51.93 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=55.4
Q ss_pred CCCeEEEcCCCCCC---------CHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhcCceeCC
Q 026963 19 ESRYLIVRNVPSLG---------CGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLDEFVFLG 89 (230)
Q Consensus 19 eS~~LyV~NLP~~~---------teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~LnG~~f~G 89 (230)
+..++.|.=..+.. .-.+|.+.|+.||+|.=++.+.| ..||+|.+-++|-+|+ .|||.+++|
T Consensus 14 pDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d--------~mwVTF~dG~SAL~al-~l~g~~v~G 84 (95)
T d1ufwa_ 14 LDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQG--------QMLVTFADSHSALSVL-DVDGMKVKG 84 (95)
T ss_dssp TTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETT--------EEEEECSCSHHHHHHH-HGGGSEETT
T ss_pred CCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCC--------eEEEEECCcHHHHHHh-ccCCeEEcc
Confidence 44567775444222 12679999999999999998865 6999999999999886 589999999
Q ss_pred ceeEEEe
Q 026963 90 NRLKVSY 96 (230)
Q Consensus 90 r~L~Vsy 96 (230)
+.|+|+.
T Consensus 85 ~~l~It~ 91 (95)
T d1ufwa_ 85 RAVKISG 91 (95)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9999984
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.67 E-value=0.086 Score=39.03 Aligned_cols=55 Identities=18% Similarity=0.246 Sum_probs=47.0
Q ss_pred CeEEEcCCCCCCCHHHHHHhhccCCcceEEEeecCCCCCCceeEEEEEEccHhHHHHHHHHhc
Q 026963 21 RYLIVRNVPSLGCGDDLLKLFATYGDIEECKPMDAEDCDPFTDVYFIKFRLFSNARFAKRKLD 83 (230)
Q Consensus 21 ~~LyV~NLP~~~teedL~~LFS~fG~I~~v~il~d~~tgksrG~AFV~F~d~edA~~A~~~Ln 83 (230)
.++|.-..|......||.+||++||.|.---| .| | -|||.-.+.++|..++..++
T Consensus 16 dHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI-dd--T-----Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 16 DHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI-DD--T-----SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE-ET--T-----EEEEECSCHHHHHHHHHHHH
T ss_pred ceeEEEeCCcccchhHHHHHhcCCCceEEEEe-cC--c-----eEEEEecCHHHHHHHHHHhc
Confidence 48999999999999999999999999974444 43 2 69999999999999988766
No 92
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=44.83 E-value=0.11 Score=35.39 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=46.0
Q ss_pred CCCCCCCcccccc-cCCCCCCCCCCCCcchhhhhhhhcccccccccccccCCCCceeeccCcccccccCchhhHH
Q 026963 124 GRSKVPNIHSSVD-LGEPSLVTAPLQPNLVSEQITSWQRASSESQRISHVNESPITRVSSDKDYFASQSMNQTVR 197 (230)
Q Consensus 124 n~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 197 (230)
|+|..+++...++ ++..| .+.++.+++.+.+...|+ .+|..+....++..+.=.+|...|.+..+++.|+
T Consensus 13 nlp~~~te~~l~~~F~~~G---~i~~~~~~~d~~~g~~~g-~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 13 NLPRTITDDQLDTIFGKYG---SIVQKNILRDKLTGRPRG-VAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp SCCTTCCHHHHHHHHTSSS---CEEEEEEEECTTTCCEEE-EEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCCCCHHHHHHHHHhhC---CEeeeeeecccccccCce-eEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 4555555555544 55666 344456666666677787 6788888888888777777777777766665553
No 93
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.38 E-value=0.1 Score=35.68 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=41.7
Q ss_pred CCCCCCCcccccc-cCCCCCCCCCCCCcchhhhhhhhcccccccccccccCCCCceeeccCcccccccCchhhHH
Q 026963 124 GRSKVPNIHSSVD-LGEPSLVTAPLQPNLVSEQITSWQRASSESQRISHVNESPITRVSSDKDYFASQSMNQTVR 197 (230)
Q Consensus 124 n~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 197 (230)
|+|..+.+.+-++ +..+| .+.++.++..+-+...++ -+|..+....++..+.=.+|...|.+..++.+|+
T Consensus 13 nLp~~~te~~L~~~F~~~G---~v~~v~i~~d~~~g~~kg-~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 13 GLPKTMTQKELEQLFSQYG---RIITSRILVDQVTGVSRG-VGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp SCCTTCCHHHHHHHHGGGS---CEEEEEEEECTTTCCEEE-EEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCCCCHHHHHHHHHHhC---CccccccccccccccCCC-eeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 3344443333333 44455 343444444444455666 5777777777777777677777788777777664
Done!