BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026965
(230 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TRD|A Chain A, Structure Of An Alpha-Beta Serine Hydrolase Homologue From
Coxiella Burnetii
Length = 208
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 18 KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG--LLKGIASGLANKGFKAV 75
+L + RPK E+ S+ ++ HP+ + GG ++ +A L G K V
Sbjct: 17 QLEVMITRPKGIEK---------SVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTV 67
Query: 76 TFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVXXXXXXXXXXXXVDEI 135
F+ RGVG+S G+ G EVED+ AV +WV + + I L +
Sbjct: 68 RFNFRGVGKSQGRYD-NGVGEVEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVAYD- 125
Query: 136 EQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRD---GFTSVKQLQNKLSS 192
++V +S+ P +F ++ + P L V G +D F VK N++SS
Sbjct: 126 QKVAQLISVAPP-------VFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS 178
Query: 193 AAGRVETHLIEGASHF 208
VE ++ GASHF
Sbjct: 179 P---VEFVVMSGASHF 191
>pdb|2FUK|A Chain A, Crystal Structure Of Xc6422 From Xanthomonas Campestris: A
Member Of AB SERINE HYDROLASE WITHOUT LID AT 1.6
Resolution
Length = 220
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 45 VLVHPYSILGGC--QGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIA 102
++ HP S GG ++ A L G V F+ R VG S G G E +D+ A
Sbjct: 41 IVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSFD-HGDGEQDDLRA 99
Query: 103 VCKWVSENLPTNRILL 118
V +WV PT+ + L
Sbjct: 100 VAEWVRAQRPTDTLWL 115
>pdb|2I3D|A Chain A, Crystal Structure Of Protein Of Unknown Function Atu1826,
A Putative AlphaBETA HYDROLASE FROM AGROBACTERIUM
TUMEFACIENS
pdb|2I3D|B Chain B, Crystal Structure Of Protein Of Unknown Function Atu1826,
A Putative AlphaBETA HYDROLASE FROM AGROBACTERIUM
TUMEFACIENS
Length = 249
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 36 KNDSSSLAIVLVHPYSILGGCQG--LLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93
K S+ +AI+L HP+ GG ++ + +GF + F+ R +GRS G+ G
Sbjct: 43 KEKSAPIAIIL-HPHPQFGGTXNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFD-HG 100
Query: 94 FAEVEDVIAVCKWVSENLPTNRILLVX-XXXXXXXXXXXVDEIEQVVGYVSLG-----YP 147
E+ D + WV P ++ V + ++ G+ S+ Y
Sbjct: 101 AGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGXQLLXRRPEIEGFXSIAPQPNTYD 160
Query: 148 FGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQ---LQNKLSSAAGRVETH-LIE 203
F +A P L + G D K L KL + G + TH +
Sbjct: 161 FSFLAPC------------PSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLP 208
Query: 204 GASHF 208
GA+HF
Sbjct: 209 GANHF 213
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Query: 57 QGL-LKGIASGLANKGFKAVTFDMRGVGRS------TGKASLTGFAEVEDVIAVCKWVSE 109
QGL + +A LA +G++ V D+ G GRS T +SLT A+++ VI +
Sbjct: 38 QGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVI-------Q 90
Query: 110 NLPTNRILLV 119
LP +LLV
Sbjct: 91 ELPDQPLLLV 100
>pdb|4A7P|A Chain A, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
pdb|4A7P|B Chain B, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
Length = 446
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 93 GFAEVEDVIAVCKWVSENLPTNRILLVXXXXXXXXXXXXVDEIEQVVGYVSLGYPFGMMA 152
G A++ V A + ++ENL +++ DE+E+++ V+ +++
Sbjct: 101 GHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTG----DEVERIIAEVAPNSGAKVVS 156
Query: 153 SILFGRHHKAILKSPKPKLFVMGTRDGF 180
+ F R AI +P V+GT D F
Sbjct: 157 NPEFLREGAAIEDFKRPDRVVVGTEDEF 184
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 67 LANKGFKAVTFDMRGVGRSTG-----KASLTGFAEVEDVIAVCKWVSEN 110
LA +G++AV D+RG G +TG + + V DV+A+ + ++ N
Sbjct: 54 LAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPN 102
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 67 LANKGFKAVTFDMRGVGRSTG-----KASLTGFAEVEDVIAVCKWVSEN 110
LA +G++AV D+RG G +TG + + V DV+A+ + ++ N
Sbjct: 54 LAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPN 102
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 36 KNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86
++ + + +VL+H + + G + ++ L + G++ +T+D RG G+S+
Sbjct: 19 EDHGTGVPVVLIHGFPLSGHS---WERQSAALLDAGYRVITYDRRGFGQSS 66
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 67 LANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119
L+++G++ + FD RG GRS + + D IA + E+L + LV
Sbjct: 42 LSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ---LIEHLDLKEVTLV 91
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 67 LANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119
L+++G++ + FD RG GRS + + D IA + E+L + LV
Sbjct: 42 LSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ---LIEHLDLKEVTLV 91
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 67 LANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119
L+++G++ + FD RG GRS + + D IA + E+L + LV
Sbjct: 42 LSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ---LIEHLDLKEVTLV 91
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 67 LANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119
L+++G++ + FD RG GRS + + D IA + E+L + LV
Sbjct: 42 LSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ---LIEHLDLKEVTLV 91
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 67 LANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119
L+++G++ + FD RG GRS + + D IA + E+L + LV
Sbjct: 42 LSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQ---LIEHLDLKEVTLV 91
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86
+VL+H + + G + ++ L + G++ +T+D RG G+S+
Sbjct: 26 VVLIHGFPLSGHS---WERQSAALLDAGYRVITYDRRGFGQSS 65
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86
+VL+H + + G + ++ L + G++ +T+D RG G+S+
Sbjct: 26 VVLIHGFPLSGHS---WERQSAALLDAGYRVITYDRRGFGQSS 65
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86
+VL+H + + G + ++ L + G++ +T+D RG G+S+
Sbjct: 26 VVLIHGFPLSGHS---WERQSAALLDAGYRVITYDRRGFGQSS 65
>pdb|3TK1|A Chain A, Crystal Structure Of A Meab And Rv1496 Ortholog From
Mycobacterium Thermoresistible Bound To Gdp
pdb|3TK1|B Chain B, Crystal Structure Of A Meab And Rv1496 Ortholog From
Mycobacterium Thermoresistible Bound To Gdp
Length = 330
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 26 PKEEEQGGEVKNDSSSLAIVLVHP--YSILGGCQGLLKGIASG-------LANKGFKAVT 76
P GG + D + +A + VHP Y G L G+A L GF V
Sbjct: 94 PSSVRSGGSILGDKTRMARLAVHPDAYVRPSPSSGTLGGVAKATRETIVLLEAAGFDVVL 153
Query: 77 FDMRGVGRS 85
+ GVG+S
Sbjct: 154 VETVGVGQS 162
>pdb|2HDW|A Chain A, Crystal Structure Of Hypothetical Protein Pa2218 From
Pseudomonas Aeruginosa
pdb|2HDW|B Chain B, Crystal Structure Of Hypothetical Protein Pa2218 From
Pseudomonas Aeruginosa
Length = 367
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 21/100 (21%)
Query: 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGL-----ANK 70
G+ L A ++ PK +GG+ P ++GG G +K +SGL A +
Sbjct: 78 GITLAADLYLPKN--RGGDRL------------PAIVIGGPFGAVKEQSSGLYAQTMAER 123
Query: 71 GFKAVTFDMRGVGRSTGKASLTGFAEV--EDVIAVCKWVS 108
GF + FD G S G+ ++ ED A ++S
Sbjct: 124 GFVTLAFDPSYTGESGGQPRNVASPDINTEDFSAAVDFIS 163
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 150 MMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQ 209
M+ LFG A++ P L V R F V Q + + G +E HL+E F
Sbjct: 205 MIGQALFGDGAAAVIVGADPDLTV--ERPIFELVSTAQTIVPESHGAIEGHLLESGLSFH 262
Query: 210 M 210
+
Sbjct: 263 L 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,269,913
Number of Sequences: 62578
Number of extensions: 223431
Number of successful extensions: 590
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 579
Number of HSP's gapped (non-prelim): 23
length of query: 230
length of database: 14,973,337
effective HSP length: 96
effective length of query: 134
effective length of database: 8,965,849
effective search space: 1201423766
effective search space used: 1201423766
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)