Query 026965
Match_columns 230
No_of_seqs 284 out of 1296
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 03:06:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026965.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026965hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02857 monoglyceride lipase; 100.0 2.4E-31 5.3E-36 199.1 21.1 206 11-229 5-272 (276)
2 PLN02298 hydrolase, alpha/beta 100.0 2.8E-30 6E-35 197.9 21.9 218 2-229 28-316 (330)
3 PRK13604 luxD acyl transferase 100.0 9.1E-30 2E-34 187.2 22.6 199 5-215 8-251 (307)
4 PLN02385 hydrolase; alpha/beta 100.0 6.1E-30 1.3E-34 197.2 21.5 214 4-229 59-344 (349)
5 PRK10749 lysophospholipase L2; 100.0 4.6E-29 1E-33 190.8 21.1 209 7-229 31-328 (330)
6 KOG1455 Lysophospholipase [Lip 100.0 4.5E-29 9.8E-34 179.0 18.8 215 5-229 26-311 (313)
7 PLN02652 hydrolase; alpha/beta 100.0 8E-28 1.7E-32 186.4 22.1 210 7-229 111-386 (395)
8 PLN02824 hydrolase, alpha/beta 100.0 2.6E-27 5.7E-32 178.8 19.8 196 14-230 15-294 (294)
9 PRK00870 haloalkane dehalogena 100.0 3.3E-27 7.1E-32 178.9 20.2 180 41-229 46-300 (302)
10 TIGR02240 PHA_depoly_arom poly 100.0 5.9E-27 1.3E-31 175.3 19.1 193 14-229 9-265 (276)
11 PRK03592 haloalkane dehalogena 100.0 8.4E-27 1.8E-31 176.2 19.3 193 14-230 14-289 (295)
12 KOG1552 Predicted alpha/beta h 100.0 1.5E-26 3.2E-31 163.0 19.0 205 5-229 34-251 (258)
13 PLN02511 hydrolase 100.0 1.8E-26 4E-31 179.4 21.4 217 4-228 69-363 (388)
14 COG2267 PldB Lysophospholipase 100.0 1.7E-26 3.7E-31 172.7 20.3 212 5-229 8-293 (298)
15 TIGR03056 bchO_mg_che_rel puta 100.0 1.9E-26 4.2E-31 172.7 20.5 197 10-228 9-278 (278)
16 PRK10673 acyl-CoA esterase; Pr 100.0 8.6E-27 1.9E-31 172.6 18.0 191 18-229 2-254 (255)
17 COG1506 DAP2 Dipeptidyl aminop 100.0 1.5E-26 3.2E-31 189.4 20.3 218 4-229 363-615 (620)
18 PRK05077 frsA fermentation/res 99.9 1.2E-25 2.6E-30 175.6 22.8 206 4-229 166-411 (414)
19 PLN02679 hydrolase, alpha/beta 99.9 4.3E-26 9.3E-31 176.2 19.8 199 15-230 69-357 (360)
20 PLN02965 Probable pheophorbida 99.9 7.5E-26 1.6E-30 167.4 20.1 181 41-230 3-253 (255)
21 TIGR03343 biphenyl_bphD 2-hydr 99.9 7E-26 1.5E-30 170.1 20.0 178 41-229 30-282 (282)
22 KOG4178 Soluble epoxide hydrol 99.9 7.4E-26 1.6E-30 164.9 18.9 203 8-229 23-319 (322)
23 TIGR03611 RutD pyrimidine util 99.9 4.3E-26 9.2E-31 168.7 18.0 179 41-229 13-257 (257)
24 PRK03204 haloalkane dehalogena 99.9 8E-26 1.7E-30 169.7 19.6 200 4-227 12-285 (286)
25 PRK10566 esterase; Provisional 99.9 1.7E-25 3.7E-30 165.1 20.6 180 41-229 27-247 (249)
26 COG1647 Esterase/lipase [Gener 99.9 2.5E-26 5.5E-31 157.4 13.8 183 41-229 15-243 (243)
27 TIGR01250 pro_imino_pep_2 prol 99.9 1.9E-25 4.2E-30 167.7 20.1 197 14-228 9-288 (288)
28 TIGR02427 protocat_pcaD 3-oxoa 99.9 5.1E-26 1.1E-30 167.4 16.4 177 41-228 13-251 (251)
29 TIGR01607 PST-A Plasmodium sub 99.9 1.5E-25 3.3E-30 171.0 18.9 204 11-229 2-332 (332)
30 PLN03087 BODYGUARD 1 domain co 99.9 6.3E-25 1.4E-29 172.6 22.7 199 13-229 182-478 (481)
31 KOG4391 Predicted alpha/beta h 99.9 1.3E-25 2.9E-30 153.2 14.5 206 2-229 50-281 (300)
32 PRK10985 putative hydrolase; P 99.9 1.7E-24 3.7E-29 165.2 21.6 213 5-228 30-318 (324)
33 PRK10349 carboxylesterase BioH 99.9 3.8E-25 8.2E-30 163.9 17.0 173 41-229 13-255 (256)
34 PRK06489 hypothetical protein; 99.9 2.3E-24 5E-29 166.9 20.1 214 6-230 36-357 (360)
35 PRK11126 2-succinyl-6-hydroxy- 99.9 1.4E-24 3E-29 159.6 16.6 171 41-230 2-242 (242)
36 TIGR01738 bioH putative pimelo 99.9 7.6E-25 1.6E-29 160.7 15.2 171 41-227 4-245 (245)
37 PF12697 Abhydrolase_6: Alpha/ 99.9 1.6E-24 3.5E-29 157.0 16.7 169 44-221 1-227 (228)
38 PLN03084 alpha/beta hydrolase 99.9 9.5E-24 2.1E-28 162.8 21.7 198 11-229 109-383 (383)
39 PLN02578 hydrolase 99.9 4.6E-24 1E-28 164.7 19.6 189 14-229 73-354 (354)
40 TIGR03695 menH_SHCHC 2-succiny 99.9 4.4E-24 9.5E-29 157.0 17.4 177 42-228 2-251 (251)
41 PF12695 Abhydrolase_5: Alpha/ 99.9 1.7E-24 3.7E-29 146.8 14.0 144 43-208 1-145 (145)
42 TIGR03100 hydr1_PEP hydrolase, 99.9 2.5E-23 5.4E-28 155.1 20.5 209 7-229 3-274 (274)
43 PRK07581 hypothetical protein; 99.9 4.9E-24 1.1E-28 164.0 16.9 199 15-229 24-335 (339)
44 PRK14875 acetoin dehydrogenase 99.9 1.4E-23 3E-28 163.6 19.4 175 41-229 131-370 (371)
45 COG2945 Predicted hydrolase of 99.9 1.6E-23 3.5E-28 140.6 16.7 199 5-227 3-204 (210)
46 PLN02211 methyl indole-3-aceta 99.9 3.4E-23 7.5E-28 154.2 19.8 179 41-229 18-269 (273)
47 KOG1454 Predicted hydrolase/ac 99.9 2.3E-23 5.1E-28 157.4 18.2 212 7-229 26-323 (326)
48 PLN02894 hydrolase, alpha/beta 99.9 4.4E-23 9.6E-28 161.1 20.3 180 41-228 105-383 (402)
49 KOG4409 Predicted hydrolase/ac 99.9 5.7E-23 1.2E-27 150.5 18.9 200 11-229 70-363 (365)
50 PRK08775 homoserine O-acetyltr 99.9 1.3E-23 2.8E-28 161.7 16.4 194 14-230 43-339 (343)
51 TIGR01249 pro_imino_pep_1 prol 99.9 1E-22 2.3E-27 154.4 19.3 201 8-227 6-306 (306)
52 PRK05855 short chain dehydroge 99.9 1E-22 2.2E-27 167.5 18.6 196 12-229 8-291 (582)
53 COG0429 Predicted hydrolase of 99.9 1E-21 2.3E-26 143.2 19.6 195 6-211 49-319 (345)
54 TIGR01392 homoserO_Ac_trn homo 99.9 8.5E-23 1.8E-27 157.7 14.9 199 14-228 13-351 (351)
55 PF01738 DLH: Dienelactone hyd 99.9 3.4E-22 7.5E-27 144.4 16.1 192 20-229 2-216 (218)
56 KOG1838 Alpha/beta hydrolase [ 99.9 4.5E-21 9.8E-26 144.7 21.0 204 5-212 92-368 (409)
57 PLN02872 triacylglycerol lipas 99.9 5E-22 1.1E-26 153.7 16.2 218 3-229 41-388 (395)
58 PRK00175 metX homoserine O-ace 99.9 9E-22 1.9E-26 153.2 16.8 199 15-229 31-373 (379)
59 PRK11071 esterase YqiA; Provis 99.9 1.6E-21 3.4E-26 137.3 15.8 159 42-228 2-189 (190)
60 PF05448 AXE1: Acetyl xylan es 99.9 8.8E-21 1.9E-25 142.8 18.3 210 3-229 53-319 (320)
61 PLN00021 chlorophyllase 99.9 1.7E-20 3.6E-25 141.2 19.7 178 17-213 37-246 (313)
62 PF00326 Peptidase_S9: Prolyl 99.9 1E-21 2.2E-26 141.6 11.5 169 60-229 3-208 (213)
63 PLN02442 S-formylglutathione h 99.9 5E-20 1.1E-24 137.8 21.0 195 6-210 18-264 (283)
64 PLN02980 2-oxoglutarate decarb 99.9 6.9E-21 1.5E-25 169.5 19.1 181 41-229 1371-1638(1655)
65 KOG4667 Predicted esterase [Li 99.9 1.7E-20 3.7E-25 128.2 15.6 192 6-214 10-245 (269)
66 PRK10162 acetyl esterase; Prov 99.9 8.2E-20 1.8E-24 138.8 21.3 208 5-229 56-314 (318)
67 PRK10115 protease 2; Provision 99.9 3.7E-20 7.9E-25 152.9 20.7 200 3-209 413-654 (686)
68 TIGR01836 PHA_synth_III_C poly 99.9 1.5E-20 3.3E-25 145.1 17.0 187 41-229 62-349 (350)
69 COG0412 Dienelactone hydrolase 99.9 1.1E-19 2.3E-24 131.7 20.1 203 7-229 3-232 (236)
70 KOG2984 Predicted hydrolase [G 99.9 7.1E-21 1.5E-25 128.9 10.2 196 14-229 28-275 (277)
71 PRK11460 putative hydrolase; P 99.8 1.7E-19 3.6E-24 131.1 17.4 173 41-227 16-209 (232)
72 PF06500 DUF1100: Alpha/beta h 99.8 3.9E-19 8.4E-24 135.3 17.9 205 3-229 162-408 (411)
73 TIGR01838 PHA_synth_I poly(R)- 99.8 2.5E-19 5.5E-24 142.5 17.0 183 18-213 173-461 (532)
74 TIGR02821 fghA_ester_D S-formy 99.8 3.8E-18 8.2E-23 127.4 22.3 186 15-210 23-258 (275)
75 TIGR01840 esterase_phb esteras 99.8 4.1E-19 8.9E-24 127.7 15.2 162 21-193 1-194 (212)
76 KOG2382 Predicted alpha/beta h 99.8 3.7E-19 8.1E-24 130.2 14.9 197 17-229 36-312 (315)
77 PF02230 Abhydrolase_2: Phosph 99.8 4.1E-18 8.9E-23 122.9 18.0 176 41-229 14-214 (216)
78 KOG2564 Predicted acetyltransf 99.8 1.1E-18 2.5E-23 124.0 13.6 101 41-145 74-179 (343)
79 PF00561 Abhydrolase_1: alpha/ 99.8 8.4E-19 1.8E-23 127.7 13.2 148 72-224 1-229 (230)
80 TIGR03101 hydr2_PEP hydrolase, 99.8 1.7E-18 3.6E-23 127.1 14.1 130 8-148 2-134 (266)
81 COG3458 Acetyl esterase (deace 99.8 4.8E-18 1E-22 120.3 15.2 192 5-208 55-300 (321)
82 PRK06765 homoserine O-acetyltr 99.8 1.1E-17 2.3E-22 129.7 16.8 202 16-229 40-387 (389)
83 PF02273 Acyl_transf_2: Acyl t 99.8 2E-16 4.3E-21 110.7 20.0 203 8-222 4-251 (294)
84 KOG3043 Predicted hydrolase re 99.8 2.3E-17 5E-22 113.8 13.4 178 41-229 39-239 (242)
85 COG3571 Predicted hydrolase of 99.8 4.1E-16 8.8E-21 102.0 17.6 185 41-230 14-211 (213)
86 PF02129 Peptidase_S15: X-Pro 99.8 2.1E-17 4.6E-22 123.2 13.3 121 15-145 1-133 (272)
87 PF12715 Abhydrolase_7: Abhydr 99.8 5.1E-17 1.1E-21 121.9 14.6 190 2-204 84-343 (390)
88 PRK07868 acyl-CoA synthetase; 99.7 1.3E-16 2.7E-21 138.0 18.1 199 19-229 49-360 (994)
89 KOG2281 Dipeptidyl aminopeptid 99.7 1.1E-16 2.4E-21 125.5 15.6 216 7-229 614-866 (867)
90 TIGR00976 /NonD putative hydro 99.7 4.9E-16 1.1E-20 126.6 19.3 122 12-145 2-129 (550)
91 COG4757 Predicted alpha/beta h 99.7 1.8E-16 3.8E-21 110.0 13.8 203 9-227 8-280 (281)
92 PF12740 Chlorophyllase2: Chlo 99.7 1.3E-15 2.9E-20 109.6 18.2 176 20-213 5-211 (259)
93 COG0657 Aes Esterase/lipase [L 99.7 2.1E-15 4.5E-20 114.9 20.4 200 14-228 59-308 (312)
94 KOG1515 Arylacetamide deacetyl 99.7 2.7E-15 5.9E-20 112.8 19.9 204 14-229 69-334 (336)
95 COG3208 GrsT Predicted thioest 99.7 5.8E-16 1.3E-20 109.0 14.7 175 41-228 7-234 (244)
96 COG0400 Predicted esterase [Ge 99.7 1.3E-15 2.7E-20 107.3 15.2 171 41-229 18-204 (207)
97 PF07859 Abhydrolase_3: alpha/ 99.7 2.5E-16 5.5E-21 113.3 11.7 160 44-209 1-209 (211)
98 KOG2100 Dipeptidyl aminopeptid 99.7 6.6E-15 1.4E-19 122.6 19.5 207 15-228 506-745 (755)
99 PF06342 DUF1057: Alpha/beta h 99.7 2.2E-14 4.7E-19 103.2 19.4 101 41-147 35-136 (297)
100 PF10503 Esterase_phd: Esteras 99.7 3.9E-15 8.4E-20 105.9 13.1 165 19-193 1-195 (220)
101 KOG4627 Kynurenine formamidase 99.7 8.5E-16 1.8E-20 104.7 9.1 177 18-211 55-251 (270)
102 PF06821 Ser_hydrolase: Serine 99.6 1.3E-14 2.9E-19 99.9 14.3 145 44-209 1-154 (171)
103 TIGR01839 PHA_synth_II poly(R) 99.6 1.1E-14 2.3E-19 115.4 15.3 176 19-208 201-481 (560)
104 PF05728 UPF0227: Uncharacteri 99.6 9.2E-14 2E-18 96.7 16.7 159 44-227 2-186 (187)
105 PRK05371 x-prolyl-dipeptidyl a 99.6 4E-14 8.6E-19 118.3 17.2 146 62-208 270-498 (767)
106 KOG2624 Triglyceride lipase-ch 99.6 8.9E-14 1.9E-18 106.9 17.2 131 3-146 45-197 (403)
107 PF07224 Chlorophyllase: Chlor 99.6 6E-14 1.3E-18 99.4 14.5 178 17-212 31-235 (307)
108 COG2021 MET2 Homoserine acetyl 99.6 5.3E-14 1.2E-18 104.9 14.7 203 15-229 34-367 (368)
109 PF09752 DUF2048: Uncharacteri 99.6 2.6E-13 5.5E-18 101.2 17.3 177 41-227 92-346 (348)
110 COG0596 MhpC Predicted hydrola 99.6 4.6E-13 9.9E-18 98.9 18.0 176 41-228 21-280 (282)
111 PF06057 VirJ: Bacterial virul 99.6 1E-13 2.3E-18 94.7 12.2 172 41-229 2-191 (192)
112 PF03403 PAF-AH_p_II: Platelet 99.6 8.9E-14 1.9E-18 107.5 12.4 157 39-208 98-315 (379)
113 COG2936 Predicted acyl esteras 99.5 3E-13 6.5E-18 106.9 15.2 133 4-145 17-156 (563)
114 COG4188 Predicted dienelactone 99.5 1.9E-13 4.1E-18 102.2 12.9 202 7-214 39-301 (365)
115 PF12146 Hydrolase_4: Putative 99.5 5E-14 1.1E-18 84.0 7.5 63 16-91 1-63 (79)
116 PF08538 DUF1749: Protein of u 99.5 1.4E-13 3E-18 101.1 10.9 182 41-228 33-303 (303)
117 PF00975 Thioesterase: Thioest 99.5 1.1E-12 2.4E-17 95.6 15.0 175 42-227 1-229 (229)
118 TIGR03230 lipo_lipase lipoprot 99.5 3.3E-13 7.3E-18 105.1 12.1 108 39-147 39-153 (442)
119 PF06028 DUF915: Alpha/beta hy 99.5 2E-12 4.3E-17 94.2 15.2 179 41-227 11-252 (255)
120 COG1505 Serine proteases of th 99.5 6.4E-13 1.4E-17 104.3 13.0 199 2-209 390-625 (648)
121 TIGR01849 PHB_depoly_PhaZ poly 99.5 3.3E-12 7.1E-17 98.6 16.0 181 42-229 103-405 (406)
122 cd00707 Pancreat_lipase_like P 99.5 1.6E-13 3.4E-18 102.2 8.5 107 41-149 36-148 (275)
123 COG4099 Predicted peptidase [G 99.5 4.4E-13 9.4E-18 96.7 9.7 158 14-190 169-338 (387)
124 PF03959 FSH1: Serine hydrolas 99.5 2.9E-13 6.3E-18 97.1 8.7 162 41-209 4-202 (212)
125 TIGR03502 lipase_Pla1_cef extr 99.5 4.9E-13 1.1E-17 110.4 10.5 91 41-134 449-575 (792)
126 COG3545 Predicted esterase of 99.5 1.6E-11 3.4E-16 82.3 15.4 130 97-229 43-178 (181)
127 KOG3847 Phospholipase A2 (plat 99.4 5.2E-12 1.1E-16 91.8 13.1 159 37-208 114-328 (399)
128 KOG2551 Phospholipase/carboxyh 99.4 6.1E-11 1.3E-15 82.4 16.0 178 41-229 5-223 (230)
129 PF10230 DUF2305: Uncharacteri 99.4 3.5E-11 7.6E-16 89.2 15.4 102 41-145 2-119 (266)
130 COG3509 LpqC Poly(3-hydroxybut 99.4 4.2E-12 9E-17 91.9 9.7 123 9-143 38-173 (312)
131 KOG2112 Lysophospholipase [Lip 99.4 6.2E-11 1.3E-15 81.8 13.9 177 41-229 3-203 (206)
132 PF05677 DUF818: Chlamydia CHL 99.3 3.7E-10 8E-15 83.8 18.0 207 5-227 111-364 (365)
133 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.8E-11 3.8E-16 92.9 11.3 166 41-208 107-370 (445)
134 PF08840 BAAT_C: BAAT / Acyl-C 99.3 9.7E-12 2.1E-16 89.2 9.5 113 97-209 3-163 (213)
135 PF03583 LIP: Secretory lipase 99.3 2.3E-10 5E-15 85.9 17.2 59 167-228 219-283 (290)
136 KOG2237 Predicted serine prote 99.3 7E-11 1.5E-15 93.6 13.9 199 3-209 438-684 (712)
137 PRK10439 enterobactin/ferric e 99.3 8.1E-10 1.7E-14 86.7 17.5 197 15-226 190-406 (411)
138 PF07819 PGAP1: PGAP1-like pro 99.2 1.5E-10 3.3E-15 83.5 10.8 106 41-151 4-126 (225)
139 PF03096 Ndr: Ndr family; Int 99.2 4.1E-09 8.9E-14 77.1 17.6 201 9-229 2-278 (283)
140 KOG3253 Predicted alpha/beta h 99.2 7.4E-10 1.6E-14 87.4 14.4 161 41-209 176-346 (784)
141 KOG1553 Predicted alpha/beta h 99.2 1E-10 2.2E-15 86.4 8.5 164 6-183 214-399 (517)
142 KOG2565 Predicted hydrolases o 99.2 4E-10 8.6E-15 84.1 11.3 112 14-136 131-251 (469)
143 PRK04940 hypothetical protein; 99.2 2.5E-09 5.4E-14 73.3 14.2 106 114-228 60-178 (180)
144 PF05990 DUF900: Alpha/beta hy 99.1 2.7E-09 5.8E-14 77.5 13.0 141 40-185 17-171 (233)
145 COG1770 PtrB Protease II [Amin 99.1 8E-09 1.7E-13 82.7 16.0 205 3-215 416-664 (682)
146 PF01674 Lipase_2: Lipase (cla 99.1 7.9E-11 1.7E-15 83.9 4.1 89 42-133 2-94 (219)
147 KOG3101 Esterase D [General fu 99.1 3.6E-09 7.9E-14 73.1 11.9 184 16-208 25-261 (283)
148 KOG2931 Differentiation-relate 99.1 5.7E-08 1.2E-12 70.6 17.8 203 6-228 22-304 (326)
149 COG4814 Uncharacterized protei 99.1 1.6E-08 3.4E-13 71.9 14.5 180 42-228 46-285 (288)
150 PF12048 DUF3530: Protein of u 99.0 1E-07 2.2E-12 72.2 17.8 183 41-230 87-309 (310)
151 cd00312 Esterase_lipase Estera 99.0 2.7E-09 5.9E-14 86.5 9.5 119 18-145 78-210 (493)
152 KOG3975 Uncharacterized conser 99.0 2.4E-07 5.3E-12 65.9 17.6 101 41-144 29-143 (301)
153 PF00756 Esterase: Putative es 99.0 1.8E-09 4E-14 79.8 7.1 156 16-180 5-196 (251)
154 PRK10252 entF enterobactin syn 99.0 2.7E-08 5.8E-13 89.7 15.4 175 41-226 1068-1293(1296)
155 PLN02733 phosphatidylcholine-s 99.0 2.2E-09 4.8E-14 84.5 7.3 95 55-151 105-204 (440)
156 COG2272 PnbA Carboxylesterase 98.9 6.9E-09 1.5E-13 80.8 9.4 108 19-134 80-200 (491)
157 PF00151 Lipase: Lipase; Inte 98.9 2.8E-09 6.1E-14 81.1 6.3 109 38-149 68-188 (331)
158 PF00135 COesterase: Carboxyle 98.9 1.2E-08 2.7E-13 83.6 10.2 122 19-146 109-243 (535)
159 PF10340 DUF2424: Protein of u 98.9 2.4E-07 5.2E-12 70.8 15.7 102 41-146 122-233 (374)
160 COG1073 Hydrolases of the alph 98.9 5.8E-08 1.3E-12 73.3 12.5 69 161-229 225-296 (299)
161 KOG1551 Uncharacterized conser 98.8 3.4E-08 7.4E-13 70.7 8.1 178 41-228 113-364 (371)
162 PF00450 Peptidase_S10: Serine 98.8 8.9E-07 1.9E-11 70.4 17.2 107 14-132 21-154 (415)
163 COG4782 Uncharacterized protei 98.8 1.2E-07 2.6E-12 71.1 10.8 92 40-133 115-210 (377)
164 PF11339 DUF3141: Protein of u 98.8 1.5E-06 3.3E-11 68.4 16.6 49 163-211 293-352 (581)
165 COG3946 VirJ Type IV secretory 98.7 5.7E-07 1.2E-11 68.4 13.2 85 41-132 260-344 (456)
166 COG3319 Thioesterase domains o 98.7 1.2E-07 2.7E-12 69.2 9.4 99 42-149 1-104 (257)
167 COG2382 Fes Enterochelin ester 98.6 6.3E-07 1.4E-11 65.9 10.9 184 37-227 94-296 (299)
168 PF10142 PhoPQ_related: PhoPQ- 98.6 8E-06 1.7E-10 62.8 16.7 114 111-229 169-319 (367)
169 smart00824 PKS_TE Thioesterase 98.6 1.1E-06 2.5E-11 62.8 11.5 163 55-226 10-211 (212)
170 PF05057 DUF676: Putative seri 98.6 2.7E-07 5.8E-12 66.5 8.1 86 41-133 4-97 (217)
171 PF05705 DUF829: Eukaryotic pr 98.6 5.4E-06 1.2E-10 60.9 14.6 174 44-227 2-240 (240)
172 PTZ00472 serine carboxypeptida 98.6 9.8E-07 2.1E-11 70.7 11.1 106 16-133 60-190 (462)
173 KOG4840 Predicted hydrolases o 98.6 3.8E-06 8.3E-11 58.9 12.4 86 41-133 36-126 (299)
174 PF11144 DUF2920: Protein of u 98.5 6E-05 1.3E-09 58.2 18.8 47 97-143 163-213 (403)
175 COG3150 Predicted esterase [Ge 98.4 2.4E-05 5.2E-10 52.5 13.1 120 98-227 43-186 (191)
176 COG2819 Predicted hydrolase of 98.4 5.8E-05 1.3E-09 55.0 16.3 98 111-208 134-244 (264)
177 COG0627 Predicted esterase [Ge 98.4 2.1E-05 4.6E-10 59.6 13.0 166 41-209 54-294 (316)
178 COG1075 LipA Predicted acetylt 98.3 3.1E-06 6.8E-11 65.1 8.4 101 41-149 59-165 (336)
179 PF05577 Peptidase_S28: Serine 98.3 2.7E-06 5.9E-11 68.1 7.1 104 41-148 29-148 (434)
180 KOG3967 Uncharacterized conser 98.2 6.1E-05 1.3E-09 52.7 11.3 105 41-147 101-226 (297)
181 KOG1516 Carboxylesterase and r 98.1 3.8E-05 8.3E-10 63.4 9.7 108 19-133 97-214 (545)
182 KOG3724 Negative regulator of 98.1 1.6E-05 3.4E-10 65.6 7.1 103 40-147 88-219 (973)
183 cd00741 Lipase Lipase. Lipase 98.1 3.2E-05 6.9E-10 52.7 7.8 80 99-181 13-97 (153)
184 PF04301 DUF452: Protein of un 98.0 4.9E-05 1.1E-09 54.0 8.7 79 41-147 11-90 (213)
185 PF08386 Abhydrolase_4: TAP-li 98.0 4.4E-05 9.5E-10 48.1 6.8 58 167-228 34-92 (103)
186 PF02450 LCAT: Lecithin:choles 98.0 2.6E-05 5.6E-10 61.4 6.7 85 59-151 66-163 (389)
187 KOG2183 Prolylcarboxypeptidase 97.9 0.00021 4.6E-09 55.0 10.0 99 42-143 81-196 (492)
188 PLN02606 palmitoyl-protein thi 97.9 0.0002 4.2E-09 53.5 9.4 100 41-147 26-131 (306)
189 PF02089 Palm_thioest: Palmito 97.8 3.7E-05 8.1E-10 56.7 5.3 103 41-147 5-115 (279)
190 PF07082 DUF1350: Protein of u 97.8 0.0031 6.7E-08 45.7 14.4 159 43-208 18-204 (250)
191 PF11288 DUF3089: Protein of u 97.8 0.00062 1.3E-08 48.2 10.3 54 97-150 77-138 (207)
192 PLN02633 palmitoyl protein thi 97.8 0.00061 1.3E-08 51.0 10.6 100 41-147 25-130 (314)
193 KOG2541 Palmitoyl protein thio 97.7 0.00051 1.1E-08 49.9 8.9 101 42-148 24-128 (296)
194 PLN02517 phosphatidylcholine-s 97.7 9.8E-05 2.1E-09 59.8 5.4 90 59-150 157-265 (642)
195 PLN03016 sinapoylglucose-malat 97.6 0.00045 9.7E-09 55.1 8.5 60 167-229 347-430 (433)
196 PF01764 Lipase_3: Lipase (cla 97.6 0.00023 5.1E-09 47.5 5.8 36 98-133 48-83 (140)
197 PF04083 Abhydro_lipase: Parti 97.5 0.00056 1.2E-08 38.6 6.1 51 3-60 9-59 (63)
198 PF05576 Peptidase_S37: PS-10 97.5 0.0035 7.6E-08 48.7 12.0 98 41-144 63-165 (448)
199 PLN02209 serine carboxypeptida 97.5 0.00081 1.8E-08 53.7 9.0 60 167-229 351-434 (437)
200 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0073 1.6E-07 41.9 12.1 79 97-181 91-171 (177)
201 KOG2369 Lecithin:cholesterol a 97.4 0.00017 3.7E-09 56.5 3.5 76 58-137 124-205 (473)
202 PF01083 Cutinase: Cutinase; 97.4 0.0018 3.8E-08 45.3 8.2 80 97-182 64-150 (179)
203 KOG4388 Hormone-sensitive lipa 97.4 0.00073 1.6E-08 54.4 6.6 86 41-132 396-487 (880)
204 KOG2182 Hydrolytic enzymes of 97.3 0.0043 9.4E-08 49.3 10.6 104 41-147 86-206 (514)
205 cd00519 Lipase_3 Lipase (class 97.3 0.002 4.4E-08 47.0 8.3 52 98-149 112-168 (229)
206 KOG1282 Serine carboxypeptidas 97.2 0.003 6.4E-08 50.4 8.1 113 12-132 52-186 (454)
207 PF11187 DUF2974: Protein of u 97.1 0.0019 4.1E-08 46.8 6.0 50 98-148 69-123 (224)
208 PF06850 PHB_depo_C: PHB de-po 97.0 0.0016 3.5E-08 45.2 4.5 63 167-229 134-201 (202)
209 PLN02454 triacylglycerol lipas 96.9 0.0015 3.2E-08 51.2 4.5 37 97-133 209-247 (414)
210 PLN00413 triacylglycerol lipas 96.9 0.0029 6.2E-08 50.3 5.9 35 99-133 269-303 (479)
211 COG4553 DepA Poly-beta-hydroxy 96.9 0.046 1E-06 40.7 11.4 63 167-229 339-406 (415)
212 PLN02934 triacylglycerol lipas 96.7 0.0046 9.9E-08 49.6 6.0 35 98-132 305-339 (515)
213 PLN02162 triacylglycerol lipas 96.6 0.0042 9.1E-08 49.3 4.6 35 98-132 262-296 (475)
214 PLN02571 triacylglycerol lipas 96.5 0.0039 8.4E-08 48.9 4.3 36 98-133 208-245 (413)
215 PLN02408 phospholipase A1 96.5 0.0046 1E-07 47.8 4.4 36 98-133 182-219 (365)
216 COG4947 Uncharacterized protei 96.5 0.0067 1.4E-07 41.3 4.5 110 97-208 84-215 (227)
217 KOG2521 Uncharacterized conser 96.4 0.33 7.2E-06 37.6 13.9 60 167-229 225-289 (350)
218 COG4287 PqaA PhoPQ-activated p 96.3 0.0062 1.3E-07 46.6 4.3 101 110-210 230-372 (507)
219 PF05277 DUF726: Protein of un 96.3 0.017 3.7E-07 44.5 6.3 68 111-182 217-290 (345)
220 PLN03037 lipase class 3 family 96.2 0.0093 2E-07 48.0 4.9 65 114-183 318-390 (525)
221 PLN02324 triacylglycerol lipas 96.2 0.0077 1.7E-07 47.3 4.3 36 98-133 197-234 (415)
222 TIGR03712 acc_sec_asp2 accesso 96.1 0.44 9.5E-06 38.4 13.4 103 14-135 273-378 (511)
223 PLN02310 triacylglycerol lipas 96.1 0.0075 1.6E-07 47.3 3.8 36 98-133 189-228 (405)
224 PLN02847 triacylglycerol lipas 96.0 0.074 1.6E-06 43.8 9.0 30 104-133 241-270 (633)
225 PLN02802 triacylglycerol lipas 96.0 0.011 2.5E-07 47.4 4.3 36 98-133 312-349 (509)
226 PLN02753 triacylglycerol lipas 95.9 0.012 2.6E-07 47.5 4.2 36 98-133 291-331 (531)
227 PLN02719 triacylglycerol lipas 95.9 0.013 2.8E-07 47.2 4.2 36 98-133 277-317 (518)
228 KOG4372 Predicted alpha/beta h 95.9 0.013 2.9E-07 45.4 4.2 86 41-133 80-169 (405)
229 KOG4569 Predicted lipase [Lipi 95.8 0.014 3E-07 45.2 4.2 50 98-147 155-211 (336)
230 PLN02761 lipase class 3 family 95.8 0.014 3.1E-07 47.0 4.2 35 98-132 272-312 (527)
231 KOG4389 Acetylcholinesterase/B 95.8 0.066 1.4E-06 42.9 7.5 86 41-129 135-233 (601)
232 KOG1202 Animal-type fatty acid 95.5 0.54 1.2E-05 42.3 12.5 91 41-146 2123-2217(2376)
233 PF07519 Tannase: Tannase and 95.2 0.87 1.9E-05 37.3 12.4 127 11-150 7-151 (474)
234 PLN02213 sinapoylglucose-malat 95.1 0.096 2.1E-06 40.4 6.6 60 167-229 233-316 (319)
235 PF03283 PAE: Pectinacetyleste 95.0 0.2 4.4E-06 39.2 8.1 36 97-132 137-174 (361)
236 PTZ00472 serine carboxypeptida 94.6 0.087 1.9E-06 42.8 5.5 62 165-229 362-458 (462)
237 COG5153 CVT17 Putative lipase 94.6 0.27 5.8E-06 36.7 7.3 38 98-135 260-297 (425)
238 KOG4540 Putative lipase essent 94.6 0.27 5.8E-06 36.7 7.3 38 98-135 260-297 (425)
239 COG2939 Carboxypeptidase C (ca 94.6 0.37 7.9E-06 38.9 8.6 89 41-133 101-217 (498)
240 PF08237 PE-PPE: PE-PPE domain 94.5 0.18 4E-06 36.6 6.5 78 71-148 2-89 (225)
241 PF09994 DUF2235: Uncharacteri 94.5 0.7 1.5E-05 34.9 9.7 93 42-134 2-112 (277)
242 PLN02213 sinapoylglucose-malat 94.5 0.17 3.8E-06 39.0 6.6 62 72-133 2-70 (319)
243 PF06441 EHN: Epoxide hydrolas 94.3 0.16 3.4E-06 32.5 5.0 29 13-51 74-102 (112)
244 PF07519 Tannase: Tannase and 94.0 0.077 1.7E-06 43.2 3.9 64 165-229 351-426 (474)
245 PLN02209 serine carboxypeptida 93.7 0.3 6.4E-06 39.4 6.7 109 15-132 50-185 (437)
246 KOG1283 Serine carboxypeptidas 93.7 1.1 2.4E-05 34.2 9.0 109 14-133 11-141 (414)
247 KOG1282 Serine carboxypeptidas 93.6 0.25 5.3E-06 39.8 6.0 60 167-229 363-447 (454)
248 PLN03016 sinapoylglucose-malat 93.6 0.33 7.2E-06 39.1 6.8 109 15-132 48-183 (433)
249 KOG2385 Uncharacterized conser 92.1 0.47 1E-05 38.4 5.6 45 111-155 444-494 (633)
250 COG3673 Uncharacterized conser 92.0 2.7 5.8E-05 32.2 9.0 94 41-134 31-142 (423)
251 COG4822 CbiK Cobalamin biosynt 89.4 3.3 7.2E-05 29.7 7.1 61 41-119 138-199 (265)
252 KOG2029 Uncharacterized conser 88.3 1.7 3.7E-05 36.1 5.9 35 98-132 508-544 (697)
253 PF10605 3HBOH: 3HB-oligomer h 87.7 0.32 7E-06 40.2 1.6 42 167-208 555-603 (690)
254 PF09949 DUF2183: Uncharacteri 85.9 6.5 0.00014 24.6 7.9 87 55-143 8-96 (100)
255 PF00326 Peptidase_S9: Prolyl 82.2 6.1 0.00013 28.2 6.0 68 41-112 144-211 (213)
256 COG3727 Vsr DNA G:T-mismatch r 81.2 4.2 9.1E-05 26.6 4.2 38 40-77 56-114 (150)
257 KOG1532 GTPase XAB1, interacts 81.1 22 0.00047 27.0 11.3 65 113-179 124-193 (366)
258 PF00698 Acyl_transf_1: Acyl t 81.1 7 0.00015 30.2 6.3 24 109-132 79-102 (318)
259 PF06792 UPF0261: Uncharacteri 80.7 21 0.00046 28.6 8.6 82 54-135 11-116 (403)
260 COG1506 DAP2 Dipeptidyl aminop 75.6 17 0.00037 31.2 7.5 68 41-112 551-618 (620)
261 COG4822 CbiK Cobalamin biosynt 74.6 30 0.00064 25.1 7.1 124 97-228 117-258 (265)
262 PRK02399 hypothetical protein; 74.5 44 0.00095 26.9 9.0 81 55-135 14-118 (406)
263 PF11713 Peptidase_C80: Peptid 74.1 4.6 0.0001 27.6 3.1 52 75-126 57-116 (157)
264 TIGR00632 vsr DNA mismatch end 73.7 8.9 0.00019 24.8 4.1 37 41-77 56-113 (117)
265 PRK05282 (alpha)-aspartyl dipe 68.0 25 0.00053 25.9 5.9 39 41-80 31-70 (233)
266 COG0400 Predicted esterase [Ge 67.7 44 0.00095 24.1 7.2 60 39-109 144-204 (207)
267 COG0529 CysC Adenylylsulfate k 67.1 42 0.00091 23.7 8.0 37 41-79 22-59 (197)
268 TIGR02884 spore_pdaA delta-lac 64.4 11 0.00023 27.5 3.6 36 41-78 186-221 (224)
269 PF09370 TIM-br_sig_trns: TIM- 63.7 20 0.00043 26.9 4.7 104 102-208 2-121 (268)
270 KOG1252 Cystathionine beta-syn 63.5 34 0.00074 26.7 6.0 99 41-143 211-334 (362)
271 PRK11460 putative hydrolase; P 62.7 49 0.0011 24.2 6.8 62 41-111 148-209 (232)
272 PRK12467 peptide synthase; Pro 62.7 43 0.00093 35.8 8.3 85 41-133 3692-3776(3956)
273 TIGR03709 PPK2_rel_1 polyphosp 62.6 12 0.00025 28.2 3.5 39 41-80 55-93 (264)
274 PF06309 Torsin: Torsin; Inte 62.0 19 0.0004 23.7 3.9 31 39-72 50-82 (127)
275 PF09419 PGP_phosphatase: Mito 60.9 54 0.0012 22.8 6.2 54 66-124 35-88 (168)
276 TIGR02764 spore_ybaN_pdaB poly 59.9 11 0.00023 26.6 2.8 37 42-78 152-188 (191)
277 cd03818 GT1_ExpC_like This fam 58.2 27 0.00058 27.8 5.1 36 44-84 2-37 (396)
278 KOG1610 Corticosteroid 11-beta 58.0 87 0.0019 24.3 7.4 67 44-115 31-106 (322)
279 PF12242 Eno-Rase_NADH_b: NAD( 57.9 35 0.00076 20.2 4.1 37 97-133 20-59 (78)
280 TIGR02873 spore_ylxY probable 57.8 15 0.00032 27.8 3.3 34 42-78 231-264 (268)
281 COG3494 Uncharacterized protei 57.3 49 0.0011 24.7 5.7 57 61-120 18-76 (279)
282 TIGR03707 PPK2_P_aer polyphosp 56.9 16 0.00034 26.9 3.3 39 41-80 30-68 (230)
283 TIGR03131 malonate_mdcH malona 56.7 19 0.00041 27.4 3.9 23 110-132 72-94 (295)
284 smart00827 PKS_AT Acyl transfe 56.7 18 0.0004 27.4 3.9 25 109-133 77-101 (298)
285 TIGR00128 fabD malonyl CoA-acy 56.5 15 0.00033 27.7 3.4 20 113-132 82-101 (290)
286 COG0331 FabD (acyl-carrier-pro 56.3 15 0.00033 28.3 3.3 28 106-133 76-104 (310)
287 cd07198 Patatin Patatin-like p 55.9 20 0.00042 24.8 3.6 32 102-134 15-46 (172)
288 PF02230 Abhydrolase_2: Phosph 55.9 47 0.001 23.8 5.7 44 41-84 155-198 (216)
289 PF10081 Abhydrolase_9: Alpha/ 55.0 94 0.002 23.8 9.5 37 114-150 109-149 (289)
290 cd00382 beta_CA Carbonic anhyd 54.5 21 0.00046 23.1 3.3 32 98-129 43-74 (119)
291 PRK00207 sulfur transfer compl 54.3 57 0.0012 21.4 5.3 79 43-122 3-81 (128)
292 PF07582 AP_endonuc_2_N: AP en 54.2 35 0.00076 18.7 4.5 41 60-110 2-43 (55)
293 PF14253 AbiH: Bacteriophage a 54.1 11 0.00025 28.1 2.3 15 112-126 233-247 (270)
294 PF01075 Glyco_transf_9: Glyco 53.4 72 0.0016 23.3 6.4 37 41-77 105-143 (247)
295 COG1087 GalE UDP-glucose 4-epi 51.5 68 0.0015 24.8 5.8 83 62-145 15-117 (329)
296 TIGR02069 cyanophycinase cyano 51.4 50 0.0011 24.6 5.2 38 41-80 28-66 (250)
297 PRK10279 hypothetical protein; 51.2 22 0.00048 27.3 3.4 30 103-133 23-52 (300)
298 PF05577 Peptidase_S28: Serine 50.8 32 0.00068 28.0 4.5 38 167-208 376-413 (434)
299 TIGR02816 pfaB_fam PfaB family 49.2 23 0.00049 29.8 3.4 25 109-133 260-284 (538)
300 COG3887 Predicted signaling pr 48.2 31 0.00066 29.2 3.9 62 81-145 307-375 (655)
301 cd03129 GAT1_Peptidase_E_like 47.6 73 0.0016 22.9 5.5 87 41-131 29-130 (210)
302 cd07225 Pat_PNPLA6_PNPLA7 Pata 46.8 29 0.00062 26.8 3.5 61 59-134 3-63 (306)
303 COG1255 Uncharacterized protei 46.6 27 0.00059 22.5 2.7 22 59-80 24-45 (129)
304 cd07212 Pat_PNPLA9 Patatin-lik 46.1 34 0.00074 26.5 3.8 31 103-133 17-51 (312)
305 cd00883 beta_CA_cladeA Carboni 46.0 31 0.00068 24.3 3.3 33 99-131 66-98 (182)
306 COG4874 Uncharacterized protei 46.0 57 0.0012 24.2 4.5 28 60-87 59-86 (318)
307 PF01583 APS_kinase: Adenylyls 45.9 51 0.0011 22.6 4.2 37 42-80 2-39 (156)
308 KOG1209 1-Acyl dihydroxyaceton 45.7 45 0.00099 24.4 4.0 36 41-80 6-41 (289)
309 cd07207 Pat_ExoU_VipD_like Exo 45.6 36 0.00079 23.9 3.7 31 102-133 16-46 (194)
310 cd07224 Pat_like Patatin-like 45.6 34 0.00074 25.1 3.6 33 102-134 16-49 (233)
311 cd07210 Pat_hypo_W_succinogene 45.3 39 0.00084 24.6 3.8 30 103-133 18-47 (221)
312 PF07643 DUF1598: Protein of u 43.9 52 0.0011 19.8 3.4 35 99-133 28-62 (84)
313 PRK04148 hypothetical protein; 42.9 97 0.0021 20.6 5.0 22 114-135 18-39 (134)
314 PF00484 Pro_CA: Carbonic anhy 42.8 80 0.0017 21.3 4.9 34 98-131 39-72 (153)
315 PF03976 PPK2: Polyphosphate k 42.7 11 0.00023 27.7 0.6 39 41-80 30-68 (228)
316 COG1576 Uncharacterized conser 42.0 97 0.0021 21.2 4.9 49 71-131 67-115 (155)
317 COG0218 Predicted GTPase [Gene 41.7 33 0.00071 24.6 2.8 64 160-229 128-198 (200)
318 PF01656 CbiA: CobQ/CobB/MinD/ 41.5 53 0.0012 22.8 4.0 21 59-79 15-35 (195)
319 PLN03006 carbonate dehydratase 41.1 38 0.00083 26.0 3.3 32 100-131 158-189 (301)
320 cd07227 Pat_Fungal_NTE1 Fungal 41.1 40 0.00087 25.5 3.4 32 102-134 27-58 (269)
321 COG3933 Transcriptional antite 40.8 2.1E+02 0.0045 23.6 8.5 72 41-129 109-180 (470)
322 KOG3062 RNA polymerase II elon 40.7 1.5E+02 0.0033 22.0 7.9 40 43-83 2-43 (281)
323 cd00884 beta_CA_cladeB Carboni 40.7 43 0.00093 23.8 3.3 34 99-132 72-105 (190)
324 cd01714 ETF_beta The electron 40.0 1.4E+02 0.003 21.4 7.0 36 98-134 94-133 (202)
325 COG3675 Predicted lipase [Lipi 39.4 34 0.00074 26.1 2.7 45 103-147 163-213 (332)
326 COG1752 RssA Predicted esteras 39.4 41 0.00088 25.9 3.3 30 103-133 29-58 (306)
327 cd07209 Pat_hypo_Ecoli_Z1214_l 39.2 48 0.001 24.0 3.5 32 103-135 16-47 (215)
328 PLN03019 carbonic anhydrase 39.1 72 0.0016 24.9 4.5 33 99-131 200-232 (330)
329 cd07205 Pat_PNPLA6_PNPLA7_NTE1 39.1 53 0.0011 22.7 3.6 31 102-133 17-47 (175)
330 cd03379 beta_CA_cladeD Carboni 38.8 47 0.001 22.3 3.2 30 99-128 41-70 (142)
331 cd03557 L-arabinose_isomerase 38.8 2.3E+02 0.0051 23.7 10.2 58 115-177 41-101 (484)
332 cd07228 Pat_NTE_like_bacteria 38.7 59 0.0013 22.5 3.8 31 103-134 18-48 (175)
333 cd03805 GT1_ALG2_like This fam 38.1 60 0.0013 25.6 4.3 35 44-78 3-37 (392)
334 COG4075 Uncharacterized conser 37.6 1E+02 0.0022 19.2 4.8 57 59-121 15-72 (110)
335 PRK06398 aldose dehydrogenase; 37.5 1.7E+02 0.0036 21.6 7.6 53 60-112 19-71 (258)
336 PF08433 KTI12: Chromatin asso 37.5 1.5E+02 0.0032 22.6 5.9 40 43-83 2-41 (270)
337 TIGR03708 poly_P_AMP_trns poly 36.9 60 0.0013 27.1 4.0 40 41-81 39-78 (493)
338 PLN00416 carbonate dehydratase 36.8 49 0.0011 24.9 3.2 33 99-131 125-157 (258)
339 KOG0369 Pyruvate carboxylase [ 36.5 2.2E+02 0.0047 25.1 7.0 64 58-133 718-783 (1176)
340 PRK15219 carbonic anhydrase; P 36.3 53 0.0011 24.5 3.3 33 99-131 128-160 (245)
341 PRK03592 haloalkane dehalogena 36.2 1.5E+02 0.0032 22.3 6.0 60 167-229 27-89 (295)
342 PLN02154 carbonic anhydrase 35.9 56 0.0012 25.0 3.4 33 99-131 151-183 (290)
343 PLN03014 carbonic anhydrase 35.6 91 0.002 24.6 4.5 33 99-131 205-237 (347)
344 COG0288 CynT Carbonic anhydras 35.4 52 0.0011 23.8 3.1 38 98-135 76-113 (207)
345 KOG1200 Mitochondrial/plastidi 35.0 1.5E+02 0.0032 21.6 5.1 55 58-112 25-89 (256)
346 PF07897 DUF1675: Protein of u 35.0 1E+02 0.0022 23.6 4.6 29 13-50 232-260 (284)
347 PRK14194 bifunctional 5,10-met 34.6 1.1E+02 0.0023 23.7 4.8 38 97-134 143-182 (301)
348 PF06180 CbiK: Cobalt chelatas 34.4 1.2E+02 0.0026 22.9 5.0 30 41-72 142-171 (262)
349 PF03205 MobB: Molybdopterin g 34.2 1.2E+02 0.0026 20.2 4.5 42 44-86 2-43 (140)
350 PF13124 DUF3963: Protein of u 34.0 44 0.00096 16.2 1.7 15 215-229 8-22 (40)
351 PF03853 YjeF_N: YjeF-related 33.9 1.6E+02 0.0035 20.3 6.3 34 41-77 25-58 (169)
352 PF01738 DLH: Dienelactone hyd 33.8 1.8E+02 0.0038 20.8 6.2 49 41-89 145-195 (218)
353 cd03785 GT1_MurG MurG is an N- 33.7 55 0.0012 25.4 3.3 33 45-78 2-34 (350)
354 TIGR03569 NeuB_NnaB N-acetylne 33.7 2.4E+02 0.0051 22.2 8.9 79 41-133 133-214 (329)
355 PRK07877 hypothetical protein; 33.4 2.1E+02 0.0045 25.4 6.8 78 110-204 104-183 (722)
356 PF02590 SPOUT_MTase: Predicte 33.3 1E+02 0.0023 21.1 4.2 44 71-125 67-110 (155)
357 cd07230 Pat_TGL4-5_like Triacy 33.0 52 0.0011 26.8 3.1 32 102-134 90-121 (421)
358 KOG2872 Uroporphyrinogen decar 32.4 74 0.0016 24.4 3.5 30 41-80 252-281 (359)
359 TIGR02240 PHA_depoly_arom poly 32.2 2.1E+02 0.0046 21.2 7.2 60 167-229 25-87 (276)
360 PRK10437 carbonic anhydrase; P 32.0 77 0.0017 23.2 3.5 33 99-131 76-108 (220)
361 PRK10162 acetyl esterase; Prov 31.9 2E+02 0.0044 22.2 6.1 40 41-82 248-287 (318)
362 PRK10673 acyl-CoA esterase; Pr 31.6 2E+02 0.0044 20.8 6.8 61 166-229 15-77 (255)
363 KOG0781 Signal recognition par 31.5 2.4E+02 0.0051 23.7 6.3 55 64-129 459-513 (587)
364 COG3946 VirJ Type IV secretory 31.5 2.9E+02 0.0063 22.6 7.1 91 41-134 48-141 (456)
365 PRK10964 ADP-heptose:LPS hepto 31.5 1.3E+02 0.0028 23.2 5.0 36 41-76 178-215 (322)
366 COG1092 Predicted SAM-dependen 31.4 2.3E+02 0.0049 23.0 6.3 55 64-122 281-337 (393)
367 KOG1752 Glutaredoxin and relat 30.9 1.4E+02 0.0031 18.8 5.5 35 99-133 54-88 (104)
368 cd07218 Pat_iPLA2 Calcium-inde 30.5 81 0.0017 23.5 3.5 31 103-133 18-49 (245)
369 TIGR03586 PseI pseudaminic aci 30.4 2.7E+02 0.0059 21.9 9.4 78 41-132 134-212 (327)
370 PF06500 DUF1100: Alpha/beta h 30.4 48 0.001 26.8 2.4 61 166-229 188-254 (411)
371 COG1856 Uncharacterized homolo 30.2 1.1E+02 0.0023 22.6 3.9 63 63-127 102-166 (275)
372 CHL00175 minD septum-site dete 29.9 1.5E+02 0.0033 22.3 5.0 38 41-79 15-52 (281)
373 PRK05579 bifunctional phosphop 29.8 3.1E+02 0.0067 22.3 9.6 78 42-121 117-196 (399)
374 TIGR03708 poly_P_AMP_trns poly 29.8 72 0.0016 26.6 3.4 39 41-80 298-336 (493)
375 TIGR03012 sulf_tusD_dsrE sulfu 29.7 1.7E+02 0.0036 19.2 5.2 62 59-121 18-79 (127)
376 cd07232 Pat_PLPL Patain-like p 29.7 67 0.0015 26.0 3.2 32 102-134 84-115 (407)
377 cd06568 GH20_SpHex_like A subg 29.3 2E+02 0.0044 22.5 5.7 30 54-83 71-101 (329)
378 PRK06171 sorbitol-6-phosphate 29.2 2.4E+02 0.0051 20.8 7.5 64 59-124 21-86 (266)
379 cd07229 Pat_TGL3_like Triacylg 28.9 72 0.0016 25.7 3.2 31 103-134 101-131 (391)
380 cd07561 Peptidase_S41_CPP_like 28.8 1.7E+02 0.0038 21.9 5.1 42 41-84 65-106 (256)
381 COG0505 CarA Carbamoylphosphat 28.7 3E+02 0.0066 21.9 6.6 65 61-132 191-267 (368)
382 cd07222 Pat_PNPLA4 Patatin-lik 28.6 78 0.0017 23.5 3.2 31 102-133 16-50 (246)
383 COG2830 Uncharacterized protei 28.5 36 0.00078 23.5 1.3 75 41-143 11-86 (214)
384 PLN02824 hydrolase, alpha/beta 28.5 2.6E+02 0.0056 21.0 6.6 59 168-229 30-98 (294)
385 cd01819 Patatin_and_cPLA2 Pata 28.5 92 0.002 21.1 3.3 30 103-132 16-46 (155)
386 PTZ00445 p36-lilke protein; Pr 28.4 2.4E+02 0.0052 20.7 6.5 65 58-124 29-102 (219)
387 PF01734 Patatin: Patatin-like 28.1 66 0.0014 22.0 2.8 23 112-134 25-47 (204)
388 cd03378 beta_CA_cladeC Carboni 27.9 1E+02 0.0022 21.1 3.4 31 99-129 77-107 (154)
389 PRK05368 homoserine O-succinyl 27.8 2.9E+02 0.0064 21.4 6.2 32 97-132 121-152 (302)
390 cd07208 Pat_hypo_Ecoli_yjju_li 27.6 93 0.002 23.3 3.5 32 102-134 15-47 (266)
391 TIGR00365 monothiol glutaredox 27.6 1.5E+02 0.0033 18.2 7.0 78 41-134 12-89 (97)
392 PLN02204 diacylglycerol kinase 27.5 4.1E+02 0.0089 23.1 7.9 35 41-75 160-194 (601)
393 cd07231 Pat_SDP1-like Sugar-De 27.4 78 0.0017 24.7 3.0 31 103-134 86-116 (323)
394 PRK13230 nitrogenase reductase 27.3 1.4E+02 0.003 22.6 4.4 25 59-83 17-41 (279)
395 PF05724 TPMT: Thiopurine S-me 27.3 1.6E+02 0.0035 21.4 4.6 31 42-80 38-68 (218)
396 TIGR02195 heptsyl_trn_II lipop 27.2 3E+02 0.0064 21.3 10.7 19 59-77 195-213 (334)
397 cd06564 GH20_DspB_LnbB-like Gl 27.2 1.9E+02 0.0042 22.5 5.3 29 55-83 79-108 (326)
398 PF10686 DUF2493: Protein of u 27.1 1.3E+02 0.0029 17.3 4.0 10 41-50 31-40 (71)
399 PF00691 OmpA: OmpA family; I 27.1 76 0.0016 19.2 2.6 61 61-122 18-79 (97)
400 cd05312 NAD_bind_1_malic_enz N 27.1 1E+02 0.0022 23.6 3.5 38 44-83 27-71 (279)
401 TIGR02193 heptsyl_trn_I lipopo 27.0 1.7E+02 0.0037 22.5 5.0 37 41-77 179-217 (319)
402 cd06570 GH20_chitobiase-like_1 27.0 3E+02 0.0066 21.4 6.4 30 54-83 64-94 (311)
403 cd07204 Pat_PNPLA_like Patatin 27.0 1E+02 0.0022 22.8 3.6 18 117-134 34-51 (243)
404 KOG0855 Alkyl hydroperoxide re 26.9 2.3E+02 0.0049 19.9 5.3 59 7-78 70-131 (211)
405 PF00578 AhpC-TSA: AhpC/TSA fa 26.8 81 0.0018 19.9 2.8 59 7-79 6-67 (124)
406 COG1225 Bcp Peroxiredoxin [Pos 26.3 2.2E+02 0.0048 19.6 5.6 60 5-78 9-71 (157)
407 cd02742 GH20_hexosaminidase Be 26.2 2.6E+02 0.0056 21.6 5.7 30 54-83 68-98 (303)
408 cd03146 GAT1_Peptidase_E Type 26.2 2.5E+02 0.0055 20.2 6.9 38 41-80 31-69 (212)
409 PHA02519 plasmid partition pro 26.2 1.4E+02 0.0031 24.0 4.5 25 59-83 123-148 (387)
410 PRK05481 lipoyl synthase; Prov 26.1 2.9E+02 0.0064 21.2 6.0 54 58-123 180-235 (289)
411 cd03820 GT1_amsD_like This fam 26.1 1.5E+02 0.0033 22.2 4.7 39 43-81 2-40 (348)
412 cd01983 Fer4_NifH The Fer4_Nif 25.9 1.3E+02 0.0029 17.5 3.6 21 58-78 14-34 (99)
413 PF09587 PGA_cap: Bacterial ca 25.9 2E+02 0.0042 21.4 4.9 12 14-25 126-137 (250)
414 PRK13599 putative peroxiredoxi 25.8 2.6E+02 0.0055 20.4 5.4 38 41-78 29-69 (215)
415 PF13200 DUF4015: Putative gly 25.6 1.6E+02 0.0035 23.0 4.4 64 45-110 2-73 (316)
416 PRK09936 hypothetical protein; 25.4 1E+02 0.0023 23.6 3.3 31 56-86 36-66 (296)
417 KOG2941 Beta-1,4-mannosyltrans 25.2 2.6E+02 0.0057 22.4 5.4 39 41-85 13-51 (444)
418 PF03721 UDPG_MGDP_dh_N: UDP-g 25.2 1.1E+02 0.0024 21.6 3.3 20 61-80 13-32 (185)
419 COG5441 Uncharacterized conser 25.2 3.3E+02 0.0072 21.2 7.6 91 44-136 4-115 (401)
420 cd00952 CHBPH_aldolase Trans-o 25.0 3.3E+02 0.0071 21.1 8.5 84 55-146 26-112 (309)
421 PRK13255 thiopurine S-methyltr 24.9 1.5E+02 0.0033 21.5 4.1 18 63-80 51-68 (218)
422 TIGR03840 TMPT_Se_Te thiopurin 24.9 1.6E+02 0.0035 21.3 4.2 18 63-80 48-65 (213)
423 TIGR03371 cellulose_yhjQ cellu 24.9 1.4E+02 0.0031 21.7 4.1 24 58-81 17-40 (246)
424 TIGR03162 ribazole_cobC alpha- 24.8 2.1E+02 0.0045 19.6 4.7 30 98-129 122-151 (177)
425 PRK10824 glutaredoxin-4; Provi 24.8 2E+02 0.0044 18.5 7.7 78 41-134 15-92 (115)
426 PF13378 MR_MLE_C: Enolase C-t 24.7 1.8E+02 0.004 18.1 6.3 58 59-132 6-63 (111)
427 PF09757 Arb2: Arb2 domain; I 24.7 25 0.00053 24.6 0.0 40 41-80 99-148 (178)
428 TIGR01007 eps_fam capsular exo 24.6 1.9E+02 0.0042 20.4 4.6 21 59-79 34-54 (204)
429 PLN03084 alpha/beta hydrolase 24.4 3.8E+02 0.0082 21.6 6.5 60 167-229 127-193 (383)
430 PF04270 Strep_his_triad: Stre 24.4 85 0.0018 17.1 2.0 32 198-229 20-52 (53)
431 COG1448 TyrB Aspartate/tyrosin 24.3 3.9E+02 0.0084 21.7 7.5 46 41-87 171-220 (396)
432 COG3640 CooC CO dehydrogenase 24.3 1.8E+02 0.004 21.7 4.3 33 45-79 3-37 (255)
433 cd02036 MinD Bacterial cell di 24.2 1.4E+02 0.0031 20.3 3.8 23 57-79 14-36 (179)
434 cd06563 GH20_chitobiase-like T 24.0 3.7E+02 0.008 21.3 6.4 29 55-83 83-112 (357)
435 PF02882 THF_DHG_CYH_C: Tetrah 24.0 2.4E+02 0.0053 19.4 4.7 37 98-134 21-59 (160)
436 KOG1201 Hydroxysteroid 17-beta 24.0 2.4E+02 0.0052 21.9 5.0 65 43-112 39-113 (300)
437 cd04951 GT1_WbdM_like This fam 23.9 1.4E+02 0.0029 23.0 4.0 38 43-81 2-39 (360)
438 PF03033 Glyco_transf_28: Glyc 23.9 95 0.0021 20.1 2.7 28 54-81 9-36 (139)
439 TIGR03029 EpsG chain length de 23.8 2.3E+02 0.005 21.2 5.1 38 41-79 103-140 (274)
440 PRK10382 alkyl hydroperoxide r 23.8 2.7E+02 0.0058 19.7 5.1 38 41-78 32-72 (187)
441 PRK13869 plasmid-partitioning 23.8 1.3E+02 0.0029 24.3 3.9 22 59-80 138-159 (405)
442 COG0541 Ffh Signal recognition 23.7 4.2E+02 0.0091 21.9 6.4 59 65-134 176-234 (451)
443 cd07206 Pat_TGL3-4-5_SDP1 Tria 23.7 1.1E+02 0.0025 23.5 3.3 30 103-133 87-116 (298)
444 PLN02361 alpha-amylase 23.6 3.9E+02 0.0085 21.8 6.4 80 44-124 12-103 (401)
445 PLN02752 [acyl-carrier protein 23.6 52 0.0011 25.8 1.6 16 117-132 127-142 (343)
446 cd06562 GH20_HexA_HexB-like Be 23.6 3.2E+02 0.007 21.6 5.9 31 55-85 67-98 (348)
447 PF01118 Semialdhyde_dh: Semia 23.5 1.1E+02 0.0024 19.6 2.9 33 115-147 1-34 (121)
448 cd01521 RHOD_PspE2 Member of t 23.4 2E+02 0.0042 17.9 5.0 32 41-77 65-96 (110)
449 PF10566 Glyco_hydro_97: Glyco 23.4 3.4E+02 0.0074 20.7 6.9 72 55-128 29-101 (273)
450 cd07211 Pat_PNPLA8 Patatin-lik 23.2 65 0.0014 24.8 2.0 17 117-133 44-60 (308)
451 COG1058 CinA Predicted nucleot 23.1 3.4E+02 0.0073 20.5 5.6 60 46-125 13-72 (255)
452 PRK07856 short chain dehydroge 23.1 3E+02 0.0066 20.0 7.2 63 60-124 19-84 (252)
453 COG0482 TrmU Predicted tRNA(5- 23.0 4E+02 0.0086 21.3 7.2 37 41-84 4-40 (356)
454 PRK05568 flavodoxin; Provision 23.0 2.3E+02 0.005 18.6 7.3 35 43-80 5-39 (142)
455 PRK00103 rRNA large subunit me 23.0 2.6E+02 0.0056 19.2 4.7 45 71-126 67-111 (157)
456 PF14606 Lipase_GDSL_3: GDSL-l 22.9 2.8E+02 0.0061 19.6 6.3 55 59-121 47-101 (178)
457 COG5039 Exopolysaccharide bios 22.8 1.3E+02 0.0029 23.2 3.4 35 43-77 88-124 (339)
458 COG0431 Predicted flavoprotein 22.8 1.1E+02 0.0024 21.5 2.9 36 98-133 84-120 (184)
459 KOG4022 Dihydropteridine reduc 22.8 2.8E+02 0.006 19.4 7.0 53 61-115 17-72 (236)
460 PRK04435 hypothetical protein; 22.6 2.5E+02 0.0055 18.9 6.0 76 41-121 68-146 (147)
461 PRK13256 thiopurine S-methyltr 22.6 1.9E+02 0.0042 21.3 4.2 18 63-80 57-74 (226)
462 TIGR01281 DPOR_bchL light-inde 22.6 98 0.0021 23.1 2.9 21 60-80 17-37 (268)
463 cd04893 ACT_GcvR_1 ACT domains 22.5 1.7E+02 0.0037 16.9 3.9 66 43-113 2-70 (77)
464 cd03016 PRX_1cys Peroxiredoxin 22.5 3E+02 0.0064 19.7 5.5 39 41-79 26-67 (203)
465 COG5483 Uncharacterized conser 22.4 2.1E+02 0.0045 21.2 4.1 66 63-128 130-198 (289)
466 PRK13191 putative peroxiredoxi 22.3 3.1E+02 0.0068 19.9 5.3 39 41-79 34-75 (215)
467 cd07220 Pat_PNPLA2 Patatin-lik 22.2 1.4E+02 0.003 22.4 3.5 31 102-133 21-55 (249)
468 KOG1578 Predicted carbonic anh 22.1 72 0.0015 24.1 1.9 35 99-133 139-173 (276)
469 TIGR01287 nifH nitrogenase iro 22.1 1E+02 0.0022 23.1 2.9 25 59-83 16-40 (275)
470 COG0279 GmhA Phosphoheptose is 22.1 1.3E+02 0.0028 21.0 3.0 28 54-82 50-77 (176)
471 cd07213 Pat17_PNPLA8_PNPLA9_li 22.1 70 0.0015 24.4 2.0 17 117-133 37-53 (288)
472 PF03575 Peptidase_S51: Peptid 22.0 40 0.00087 22.8 0.6 13 116-128 70-82 (154)
473 COG0859 RfaF ADP-heptose:LPS h 21.7 2.3E+02 0.0049 22.2 4.8 37 41-77 175-214 (334)
474 cd02032 Bchl_like This family 21.7 1E+02 0.0022 23.0 2.8 22 59-80 16-37 (267)
475 TIGR01969 minD_arch cell divis 21.7 1.5E+02 0.0032 21.7 3.6 23 58-80 16-38 (251)
476 PRK00870 haloalkane dehalogena 21.6 3.6E+02 0.0079 20.4 6.6 60 168-229 47-111 (302)
477 TIGR01118 lacA galactose-6-pho 21.6 2.7E+02 0.0058 18.8 4.7 106 61-194 16-122 (141)
478 PRK13185 chlL protochlorophyll 21.5 1.1E+02 0.0023 22.9 2.9 25 59-83 18-42 (270)
479 PF13439 Glyco_transf_4: Glyco 21.5 1.2E+02 0.0027 20.1 3.1 27 54-80 12-38 (177)
480 PRK12563 sulfate adenylyltrans 21.5 1.6E+02 0.0034 23.0 3.7 6 168-173 68-73 (312)
481 PRK07933 thymidylate kinase; V 21.3 2.6E+02 0.0055 20.2 4.7 41 44-85 2-42 (213)
482 PTZ00062 glutaredoxin; Provisi 21.3 3.3E+02 0.0071 19.7 7.2 81 41-137 113-193 (204)
483 PF14987 NADHdh_A3: NADH dehyd 21.3 1.6E+02 0.0035 17.5 2.9 27 103-129 5-31 (84)
484 cd07221 Pat_PNPLA3 Patatin-lik 21.2 1.5E+02 0.0032 22.2 3.5 19 115-133 33-51 (252)
485 PLN02733 phosphatidylcholine-s 21.1 65 0.0014 26.4 1.7 50 171-228 370-420 (440)
486 KOG3179 Predicted glutamine sy 21.0 1.9E+02 0.0041 21.0 3.7 105 111-226 89-205 (245)
487 KOG2170 ATPase of the AAA+ sup 21.0 1.8E+02 0.004 22.7 3.8 13 39-51 107-119 (344)
488 PF14252 DUF4347: Domain of un 21.0 3E+02 0.0065 19.1 4.8 51 56-123 8-58 (165)
489 PRK00652 lpxK tetraacyldisacch 20.9 2.9E+02 0.0064 21.7 5.1 31 55-86 63-93 (325)
490 TIGR02113 coaC_strep phosphopa 20.7 2.2E+02 0.0047 20.0 4.0 39 41-79 112-150 (177)
491 PF00290 Trp_syntA: Tryptophan 20.7 3.8E+02 0.0083 20.3 6.9 103 41-150 10-128 (259)
492 PF08643 DUF1776: Fungal famil 20.6 1.7E+02 0.0036 22.7 3.7 30 44-77 5-34 (299)
493 PLN03050 pyridoxine (pyridoxam 20.6 2.5E+02 0.0055 21.0 4.5 33 43-78 62-94 (246)
494 PF02606 LpxK: Tetraacyldisacc 20.5 1.7E+02 0.0037 22.9 3.8 43 43-87 36-80 (326)
495 cd02037 MRP-like MRP (Multiple 20.5 1.4E+02 0.0031 20.3 3.1 21 59-79 16-36 (169)
496 PF08484 Methyltransf_14: C-me 20.3 2.7E+02 0.0059 19.1 4.4 30 113-142 68-98 (160)
497 COG2326 Uncharacterized conser 20.3 1.4E+02 0.0031 22.5 3.1 40 40-80 72-111 (270)
498 PF05673 DUF815: Protein of un 20.3 3.9E+02 0.0084 20.1 5.5 57 45-119 55-111 (249)
499 PRK13656 trans-2-enoyl-CoA red 20.3 4E+02 0.0087 21.7 5.7 75 58-132 199-279 (398)
500 cd07199 Pat17_PNPLA8_PNPLA9_li 20.2 1.5E+02 0.0032 22.1 3.3 32 101-132 15-52 (258)
No 1
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=2.4e-31 Score=199.08 Aligned_cols=206 Identities=21% Similarity=0.295 Sum_probs=157.0
Q ss_pred eecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCC
Q 026965 11 VETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKAS 90 (230)
Q Consensus 11 ~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 90 (230)
+...||.+|.|++|.|... + .++|+++||+ +++...|..+++.|+++||.|+++|+||||.|++...
T Consensus 5 ~~~~~g~~l~~~~~~~~~~-------~---~~~v~llHG~---~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~ 71 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITY-------P---KALVFISHGA---GEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM 71 (276)
T ss_pred eecCCCCEEEEEeccCCCC-------C---CEEEEEeCCC---ccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC
Confidence 3447999999999988532 1 6788888998 6778899999999999999999999999999976432
Q ss_pred C-CCc-ccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccc-eEEEEEcCCcchhhh------------hhh
Q 026965 91 L-TGF-AEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGMMA------------SIL 155 (230)
Q Consensus 91 ~-~~~-~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~ 155 (230)
. ..+ ..++|+...++.+++..+..+++++|||+||.+++.++.+.+. +++++++++...... ...
T Consensus 72 ~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T PHA02857 72 MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIF 151 (276)
T ss_pred CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHh
Confidence 1 111 1256777777776666667789999999999999988866554 688888765421100 000
Q ss_pred cc----------------------------------------------cccccccCCCCCEEEEecCCCcccCHHHHHHH
Q 026965 156 FG----------------------------------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNK 189 (230)
Q Consensus 156 ~~----------------------------------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~ 189 (230)
.. .....+.++++|+|+++|++|.++|++.++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 152 YPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred CCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHH
Confidence 00 00123456899999999999999999999877
Q ss_pred HHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 190 LSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 190 ~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.++..+++++.++++++|. ..+.++..+++++.+.+||++
T Consensus 232 ~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 232 MQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred HHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 7776667899999999999 667777778999999999975
No 2
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=2.8e-30 Score=197.93 Aligned_cols=218 Identities=20% Similarity=0.227 Sum_probs=157.0
Q ss_pred CccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 2 SSYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 2 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
.++..++..+.+.||.+|+|+.+.|.+.. ++.++||++||++ ......+..++..|+++||+|+++|+||
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~--------~~~~~VvllHG~~--~~~~~~~~~~~~~L~~~Gy~V~~~D~rG 97 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSSS--------PPRALIFMVHGYG--NDISWTFQSTAIFLAQMGFACFALDLEG 97 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCCC--------CCceEEEEEcCCC--CCcceehhHHHHHHHhCCCEEEEecCCC
Confidence 34556677888889999999999875420 1278899999984 2223356777888999999999999999
Q ss_pred cccCCCCCCC-CCc-ccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCcchhh-----
Q 026965 82 VGRSTGKASL-TGF-AEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMM----- 151 (230)
Q Consensus 82 ~g~s~~~~~~-~~~-~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~----- 151 (230)
||.|++.... ... ...+|+..+++++... ++..+++|+||||||.+++.++.+.| .+.+++++++.....
T Consensus 98 hG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 177 (330)
T PLN02298 98 HGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRP 177 (330)
T ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCC
Confidence 9999754321 111 1267888888888654 34457999999999999998877655 588888776432100
Q ss_pred -----------hhhh-----------ccc------------------------------------ccccccCCCCCEEEE
Q 026965 152 -----------ASIL-----------FGR------------------------------------HHKAILKSPKPKLFV 173 (230)
Q Consensus 152 -----------~~~~-----------~~~------------------------------------~~~~~~~~~~p~l~i 173 (230)
.... ... ....+.++++|+|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii 257 (330)
T PLN02298 178 PWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVL 257 (330)
T ss_pred chHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 0000 000 011234678999999
Q ss_pred ecCCCcccCHHHHHHHHHhcc-CceEEEEecCCCcc-cccChh-hHHHHHHHHHHHHhh
Q 026965 174 MGTRDGFTSVKQLQNKLSSAA-GRVETHLIEGASHF-QMEGPA-YDAQMVNLILDFIAS 229 (230)
Q Consensus 174 ~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~-~~~~~~-~~~~~~~~i~~fl~~ 229 (230)
+|++|.++|++.++.++++.. ++++++++++++|. +.+.|+ ..+++.+.+.+||.+
T Consensus 258 ~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 258 HGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred ecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999887777654 57899999999999 556664 345788888899875
No 3
>PRK13604 luxD acyl transferase; Provisional
Probab=99.97 E-value=9.1e-30 Score=187.21 Aligned_cols=199 Identities=16% Similarity=0.223 Sum_probs=150.5
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc-c
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV-G 83 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g 83 (230)
...+..+.+.+|.+|.+|+..|.+.. ..+.++||++||+ +.....+..+++.|+++||.|+.+|+||+ |
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~~-------~~~~~~vIi~HGf---~~~~~~~~~~A~~La~~G~~vLrfD~rg~~G 77 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKENS-------PKKNNTILIASGF---ARRMDHFAGLAEYLSSNGFHVIRYDSLHHVG 77 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcccC-------CCCCCEEEEeCCC---CCChHHHHHHHHHHHHCCCEEEEecCCCCCC
Confidence 34556778889999999999996421 1227899999998 45555699999999999999999999987 9
Q ss_pred cCCCCCCCCCcc-cHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhh----------
Q 026965 84 RSTGKASLTGFA-EVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMA---------- 152 (230)
Q Consensus 84 ~s~~~~~~~~~~-~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~---------- 152 (230)
.|++........ ...|+..+++|++++ +.++++|+||||||.+++.+|... ++.++++.++......
T Consensus 78 eS~G~~~~~t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~ 155 (307)
T PRK13604 78 LSSGTIDEFTMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDY 155 (307)
T ss_pred CCCCccccCcccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhccc
Confidence 998765333222 278999999999876 567899999999999998777643 4666666554333110
Q ss_pred ---------------------hhhccc-----cc------ccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc-CceEE
Q 026965 153 ---------------------SILFGR-----HH------KAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVET 199 (230)
Q Consensus 153 ---------------------~~~~~~-----~~------~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~ 199 (230)
..+... .. +.+.+++.|+|+|||++|.+||++.+++++++.. .++++
T Consensus 156 ~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl 235 (307)
T PRK13604 156 LSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKL 235 (307)
T ss_pred ccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEE
Confidence 000000 01 2244578999999999999999999998888775 68999
Q ss_pred EEecCCCcccccChhh
Q 026965 200 HLIEGASHFQMEGPAY 215 (230)
Q Consensus 200 ~~~~~~~H~~~~~~~~ 215 (230)
+++||++|.+.++.-.
T Consensus 236 ~~i~Ga~H~l~~~~~~ 251 (307)
T PRK13604 236 YSLIGSSHDLGENLVV 251 (307)
T ss_pred EEeCCCccccCcchHH
Confidence 9999999998777643
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=6.1e-30 Score=197.23 Aligned_cols=214 Identities=21% Similarity=0.269 Sum_probs=153.0
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-hhHHHHHHHHhCCCeEEEEeeccc
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-LLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
+..++..+.+.+|.+|.+..+.|.+. ++ .++|||+||++ ++.. .|..+++.|+++||.|+++|+|||
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~~~------~~---~~~iv~lHG~~---~~~~~~~~~~~~~l~~~g~~v~~~D~~G~ 126 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPENS------RP---KAAVCFCHGYG---DTCTFFFEGIARKIASSGYGVFAMDYPGF 126 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecCCC------CC---CeEEEEECCCC---CccchHHHHHHHHHHhCCCEEEEecCCCC
Confidence 44566667778999999999998643 11 78999999983 4433 467889999999999999999999
Q ss_pred ccCCCCCCC-CCc-ccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCcchhh------
Q 026965 83 GRSTGKASL-TGF-AEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMM------ 151 (230)
Q Consensus 83 g~s~~~~~~-~~~-~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~------ 151 (230)
|.|++.... ... ..++|+.+.++.+... ++..+++|+||||||.+++.++.+.| .+.++|++++.....
T Consensus 127 G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~ 206 (349)
T PLN02385 127 GLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPP 206 (349)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCc
Confidence 999865322 111 1256666666665432 34458999999999999998877655 577777775421100
Q ss_pred --------------h-----------hhhccc--------------------------------ccccccCCCCCEEEEe
Q 026965 152 --------------A-----------SILFGR--------------------------------HHKAILKSPKPKLFVM 174 (230)
Q Consensus 152 --------------~-----------~~~~~~--------------------------------~~~~~~~~~~p~l~i~ 174 (230)
+ ...+.. ....+.++++|+|+++
T Consensus 207 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~ 286 (349)
T PLN02385 207 PLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILH 286 (349)
T ss_pred hHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEE
Confidence 0 000000 0012346799999999
Q ss_pred cCCCcccCHHHHHHHHHhcc-CceEEEEecCCCcc-cccChhh-HHHHHHHHHHHHhh
Q 026965 175 GTRDGFTSVKQLQNKLSSAA-GRVETHLIEGASHF-QMEGPAY-DAQMVNLILDFIAS 229 (230)
Q Consensus 175 g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~-~~~~~~~-~~~~~~~i~~fl~~ 229 (230)
|++|.++|++.++.++++.. ++++++++++++|. ..++|+. .+++++.|.+||++
T Consensus 287 G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 287 GEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred eCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 99999999999887777664 57899999999999 4566652 45688889999875
No 5
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=4.6e-29 Score=190.77 Aligned_cols=209 Identities=18% Similarity=0.171 Sum_probs=151.7
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
++..+...+|.+++|..++|.+. .++||++||+ +++...|..++..+.++||.|+++|+||||.|+
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~~~-----------~~~vll~HG~---~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~ 96 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAPHH-----------DRVVVICPGR---IESYVKYAELAYDLFHLGYDVLIIDHRGQGRSG 96 (330)
T ss_pred cceEEEcCCCCEEEEEEccCCCC-----------CcEEEEECCc---cchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCC
Confidence 45566667899999999987543 6789999998 677778999999999999999999999999997
Q ss_pred CCCCCC------Cc-ccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh---hh--
Q 026965 87 GKASLT------GF-AEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM---AS-- 153 (230)
Q Consensus 87 ~~~~~~------~~-~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~---~~-- 153 (230)
...... .. ..++|+..+++.+....+..+++++||||||.+++.++... ..+.+++++++..... ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~ 176 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWM 176 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHH
Confidence 542211 11 12566666666655555778999999999999999777654 4567777765532100 00
Q ss_pred ------h-----------------h------------------------cccc----------------------ccccc
Q 026965 154 ------I-----------------L------------------------FGRH----------------------HKAIL 164 (230)
Q Consensus 154 ------~-----------------~------------------------~~~~----------------------~~~~~ 164 (230)
. + .... ...+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (330)
T PRK10749 177 ARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAG 256 (330)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhcc
Confidence 0 0 0000 01234
Q ss_pred CCCCCEEEEecCCCcccCHHHHHHHHHhc------cCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 165 KSPKPKLFVMGTRDGFTSVKQLQNKLSSA------AGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 165 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~------~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
++++|+|+++|++|.+++++.++.+.+.. .+++++++++|++|. +.+.+...+++.+.|.+||++
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 67899999999999999998877655543 145689999999999 556655567899999999976
No 6
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=4.5e-29 Score=178.99 Aligned_cols=215 Identities=20% Similarity=0.208 Sum_probs=162.0
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
......+.+.+|.++.+..|.|.... .+...|+++||++ ..+...|..++..|+..||.|+++|++|||.
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~~~--------~pr~lv~~~HG~g--~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~ 95 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLSGT--------EPRGLVFLCHGYG--EHSSWRYQSTAKRLAKSGFAVYAIDYEGHGR 95 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCCCC--------CCceEEEEEcCCc--ccchhhHHHHHHHHHhCCCeEEEeeccCCCc
Confidence 34556778889999999999996531 2277899999985 4555788999999999999999999999999
Q ss_pred CCCCCCCCCcc--cHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccc-eEEEEEcCCcchhh--------
Q 026965 85 STGKASLTGFA--EVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGMM-------- 151 (230)
Q Consensus 85 s~~~~~~~~~~--~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~~-------- 151 (230)
|++........ .++|+...++.++.+ ....+.+++||||||++++.++.+.|. ..+++++++.....
T Consensus 96 SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~ 175 (313)
T KOG1455|consen 96 SDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPP 175 (313)
T ss_pred CCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcH
Confidence 99765433322 267777777765443 556789999999999999988875554 44555543221100
Q ss_pred ------------hhhh-----------cc--------------------------------cccccccCCCCCEEEEecC
Q 026965 152 ------------ASIL-----------FG--------------------------------RHHKAILKSPKPKLFVMGT 176 (230)
Q Consensus 152 ------------~~~~-----------~~--------------------------------~~~~~~~~~~~p~l~i~g~ 176 (230)
+.+. +. .....+.++++|.+++||+
T Consensus 176 v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~ 255 (313)
T KOG1455|consen 176 VISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGT 255 (313)
T ss_pred HHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecC
Confidence 0000 00 0113455789999999999
Q ss_pred CCcccCHHHHHHHHHhcc-CceEEEEecCCCcccc--cChhhHHHHHHHHHHHHhh
Q 026965 177 RDGFTSVKQLQNKLSSAA-GRVETHLIEGASHFQM--EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 177 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~--~~~~~~~~~~~~i~~fl~~ 229 (230)
+|.+++++.++.+++.+. .++++.+|||.-|..+ +.++..+.++..|.+||++
T Consensus 256 dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 256 DDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred CCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 999999999999998886 6799999999999955 5666778999999999975
No 7
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=8e-28 Score=186.39 Aligned_cols=210 Identities=19% Similarity=0.229 Sum_probs=154.5
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
....+...++..+.++.|.|... ++ .++||++||+ +++...|..+++.|+++||.|+++|+||||.|+
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~------~~---~~~Vl~lHG~---~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~ 178 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAG------EM---RGILIIIHGL---NEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSD 178 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCC------CC---ceEEEEECCc---hHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 44556667888899999988543 12 6799999998 566677899999999999999999999999998
Q ss_pred CCCCCC-Cc-ccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc---cceEEEEEcCCcchhhh---------
Q 026965 87 GKASLT-GF-AEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI---EQVVGYVSLGYPFGMMA--------- 152 (230)
Q Consensus 87 ~~~~~~-~~-~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~~~~~~~~~~~~~~~~--------- 152 (230)
+..... .. ...+|+..+++.+....+..+++++||||||.+++.++.++ +.+.++++.++......
T Consensus 179 ~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~ 258 (395)
T PLN02652 179 GLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVA 258 (395)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHH
Confidence 754321 11 12678888888887766667899999999999999877643 25777777654321100
Q ss_pred --------hhh---------------------ccc----------------------ccccccCCCCCEEEEecCCCccc
Q 026965 153 --------SIL---------------------FGR----------------------HHKAILKSPKPKLFVMGTRDGFT 181 (230)
Q Consensus 153 --------~~~---------------------~~~----------------------~~~~~~~~~~p~l~i~g~~D~~~ 181 (230)
... ... ....+.++++|+|+++|++|.++
T Consensus 259 ~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vv 338 (395)
T PLN02652 259 PIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVT 338 (395)
T ss_pred HHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCC
Confidence 000 000 01223467899999999999999
Q ss_pred CHHHHHHHHHhcc-CceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 182 SVKQLQNKLSSAA-GRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|++.+++++++.. .+++++++++++|..+.++ ..+++++.+.+||++
T Consensus 339 p~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~-~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 339 DPLASQDLYNEAASRHKDIKLYDGFLHDLLFEP-EREEVGRDIIDWMEK 386 (395)
T ss_pred CHHHHHHHHHhcCCCCceEEEECCCeEEeccCC-CHHHHHHHHHHHHHH
Confidence 9999998888754 4688999999999943222 134889999999874
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.6e-27 Score=178.83 Aligned_cols=196 Identities=18% Similarity=0.233 Sum_probs=145.0
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCC--
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASL-- 91 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~-- 91 (230)
.+|.+++|...+++ .++|||+||+ +++...|..+.+.|+++ |+|+++|+||+|.|+.....
T Consensus 15 ~~~~~i~y~~~G~~-------------~~~vlllHG~---~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~ 77 (294)
T PLN02824 15 WKGYNIRYQRAGTS-------------GPALVLVHGF---GGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSA 77 (294)
T ss_pred EcCeEEEEEEcCCC-------------CCeEEEECCC---CCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccc
Confidence 46778887765532 5789999998 67778999999999987 79999999999999865321
Q ss_pred --CCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcCCcchh----------h------h
Q 026965 92 --TGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFGM----------M------A 152 (230)
Q Consensus 92 --~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~----------~------~ 152 (230)
......++..+.+..+.+.++.++++++||||||.+++.++.+ ++++.++++++++... . .
T Consensus 78 ~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 78 PPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred cccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 1112245555555555566677899999999999999977765 4578888887643200 0 0
Q ss_pred hh----------------------h----ccc------------------------------------ccccccCCCCCE
Q 026965 153 SI----------------------L----FGR------------------------------------HHKAILKSPKPK 170 (230)
Q Consensus 153 ~~----------------------~----~~~------------------------------------~~~~~~~~~~p~ 170 (230)
.. . +.. ....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 00 0 000 001234679999
Q ss_pred EEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhhC
Q 026965 171 LFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~~ 230 (230)
++++|++|..++.+.++. +.+..++.++++++++||+ ++++|+ ++.+.|.+|+++.
T Consensus 238 lvi~G~~D~~~~~~~~~~-~~~~~~~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 294 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRA-YANFDAVEDFIVLPGVGHCPQDEAPE---LVNPLIESFVARH 294 (294)
T ss_pred EEEEecCCCCCChHHHHH-HHhcCCccceEEeCCCCCChhhhCHH---HHHHHHHHHHhcC
Confidence 999999999999988774 6777777899999999999 778887 9999999999863
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=3.3e-27 Score=178.89 Aligned_cols=180 Identities=19% Similarity=0.229 Sum_probs=130.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+|||+||+ +++...|..+++.|.++||+|+++|+||||.|+.......+. .++..+.+..+.++++.++++++|
T Consensus 46 ~~~lvliHG~---~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~-~~~~a~~l~~~l~~l~~~~v~lvG 121 (302)
T PRK00870 46 GPPVLLLHGE---PSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYT-YARHVEWMRSWFEQLDLTDVTLVC 121 (302)
T ss_pred CCEEEEECCC---CCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCC-HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 5789999998 677888999999999889999999999999997643322221 344444444445667888999999
Q ss_pred ecchHHHHHHhhhcc-cceEEEEEcCCcchhh-----------------------hhh---------------hc-----
Q 026965 121 SSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM-----------------------ASI---------------LF----- 156 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~-----------------------~~~---------------~~----- 156 (230)
||+||.+++.++..+ ..+.+++++++..... ... .+
T Consensus 122 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (302)
T PRK00870 122 QDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFP 201 (302)
T ss_pred EChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccC
Confidence 999999999888654 5677777765321100 000 00
Q ss_pred c----c-----------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceE---EEEecCCC
Q 026965 157 G----R-----------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVE---THLIEGAS 206 (230)
Q Consensus 157 ~----~-----------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 206 (230)
. . .+..+.++++|+++++|++|+++|... + .+.+..++.+ +++++++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~-~~~~~~~~~~~~~~~~i~~~g 279 (302)
T PRK00870 202 DESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-A-ILQKRIPGAAGQPHPTIKGAG 279 (302)
T ss_pred ChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-H-HHHhhcccccccceeeecCCC
Confidence 0 0 001234678999999999999999755 4 4555555554 88999999
Q ss_pred cc-cccChhhHHHHHHHHHHHHhh
Q 026965 207 HF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 207 H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|+ ++++|+ ++.+.|.+|+++
T Consensus 280 H~~~~e~p~---~~~~~l~~fl~~ 300 (302)
T PRK00870 280 HFLQEDSGE---ELAEAVLEFIRA 300 (302)
T ss_pred ccchhhChH---HHHHHHHHHHhc
Confidence 99 778887 999999999975
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.96 E-value=5.9e-27 Score=175.32 Aligned_cols=193 Identities=19% Similarity=0.311 Sum_probs=140.2
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
.+|.+++|......+. .++|||+||+ +++...|..+.+.|.+. |+|+++|+||+|.|+.+....
T Consensus 9 ~~~~~~~~~~~~~~~~-----------~~plvllHG~---~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~- 72 (276)
T TIGR02240 9 LDGQSIRTAVRPGKEG-----------LTPLLIFNGI---GANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPRHPY- 72 (276)
T ss_pred cCCcEEEEEEecCCCC-----------CCcEEEEeCC---CcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCCCcC-
Confidence 4777888876532211 5789999998 67777899999999874 999999999999998643322
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh-------------h--hh---
Q 026965 94 FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM-------------A--SI--- 154 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~-------------~--~~--- 154 (230)
..+++.+.+..+.+.++.++++|+||||||.+++.++.+. ..+.++++++++.... . ..
T Consensus 73 --~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 73 --RFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred --cHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 2355555555555666778999999999999999888764 5577777765432100 0 00
Q ss_pred ---------hcc----c-------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHH
Q 026965 155 ---------LFG----R-------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKL 190 (230)
Q Consensus 155 ---------~~~----~-------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 190 (230)
++. . ....+.++++|+++++|++|++++++..+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l 229 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-L 229 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-H
Confidence 000 0 001245788999999999999999988774 4
Q ss_pred HhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 191 SSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 191 ~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+..++.+++++++ ||+ +.+.|+ ++.+.|.+|+++
T Consensus 230 ~~~~~~~~~~~i~~-gH~~~~e~p~---~~~~~i~~fl~~ 265 (276)
T TIGR02240 230 AWRIPNAELHIIDD-GHLFLITRAE---AVAPIIMKFLAE 265 (276)
T ss_pred HHhCCCCEEEEEcC-CCchhhccHH---HHHHHHHHHHHH
Confidence 55567889999985 999 777776 999999999875
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=8.4e-27 Score=176.15 Aligned_cols=193 Identities=17% Similarity=0.174 Sum_probs=142.2
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
.+|.+++|..++. +++||++||+ +++...|..+++.|+++ +.|+++|+||+|.|+.+....
T Consensus 14 ~~g~~i~y~~~G~--------------g~~vvllHG~---~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~- 74 (295)
T PRK03592 14 VLGSRMAYIETGE--------------GDPIVFLHGN---PTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDY- 74 (295)
T ss_pred ECCEEEEEEEeCC--------------CCEEEEECCC---CCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCC-
Confidence 4788888887652 6789999998 67888999999999998 599999999999998654322
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchh-----hh-------hh------
Q 026965 94 FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGM-----MA-------SI------ 154 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~-----~~-------~~------ 154 (230)
..++..+.+..+.+.++.++++++|||+||.+++.++.++ +.+.++++++++... .. ..
T Consensus 75 --~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (295)
T PRK03592 75 --TFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGE 152 (295)
T ss_pred --CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccc
Confidence 2344444455555667788999999999999999777655 467888877642100 00 00
Q ss_pred --------------hcccc-------------------------------------------------cccccCCCCCEE
Q 026965 155 --------------LFGRH-------------------------------------------------HKAILKSPKPKL 171 (230)
Q Consensus 155 --------------~~~~~-------------------------------------------------~~~~~~~~~p~l 171 (230)
.+... ...+.++++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 232 (295)
T PRK03592 153 GEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKL 232 (295)
T ss_pred ccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeE
Confidence 00000 001234689999
Q ss_pred EEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhhC
Q 026965 172 FVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 172 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~~ 230 (230)
+++|++|.++++....+...+..++.++++++++||+ +.++|+ ++.+.|.+|++++
T Consensus 233 ii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~---~v~~~i~~fl~~~ 289 (295)
T PRK03592 233 LINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPE---EIGAAIAAWLRRL 289 (295)
T ss_pred EEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHH---HHHHHHHHHHHHh
Confidence 9999999999666655566666678999999999999 677776 9999999999763
No 12
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=1.5e-26 Score=162.96 Aligned_cols=205 Identities=24% Similarity=0.348 Sum_probs=159.3
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHh-CCCeEEEEeecccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLAN-KGFKAVTFDMRGVG 83 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g 83 (230)
.++-...++..|..+...++.|.... .++++++||. ..+......+...|.. -+++++.+|++|+|
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~----------~~~lly~hGN---a~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG 100 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAA----------HPTLLYSHGN---AADLGQMVELFKELSIFLNCNVVSYDYSGYG 100 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcccc----------ceEEEEcCCc---ccchHHHHHHHHHHhhcccceEEEEeccccc
Confidence 34455667777877888888776542 6899999997 4555555666666655 37999999999999
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHHhhC-CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcc-----
Q 026965 84 RSTGKASLTGFAEVEDVIAVCKWVSENL-PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFG----- 157 (230)
Q Consensus 84 ~s~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 157 (230)
.|++.+..... .+|++++.+++++.. +.++|+++|+|+|+..++.+|.+.+ +.++|+.+ |+......++.
T Consensus 101 ~S~G~psE~n~--y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~S-Pf~S~~rv~~~~~~~~ 176 (258)
T KOG1552|consen 101 RSSGKPSERNL--YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHS-PFTSGMRVAFPDTKTT 176 (258)
T ss_pred ccCCCcccccc--hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEec-cchhhhhhhccCcceE
Confidence 99999987755 699999999999998 5889999999999999999998888 77777664 44333332222
Q ss_pred ------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 158 ------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 158 ------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
...+.+..+++|+|++||++|++++..+..++++......+..++.|+||...+... +..+.+..|+..
T Consensus 177 ~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~---~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 177 YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYP---EYIEHLRRFISS 251 (258)
T ss_pred EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCH---HHHHHHHHHHHH
Confidence 113456678899999999999999999999899988877888999999999554443 667777777653
No 13
>PLN02511 hydrolase
Probab=99.95 E-value=1.8e-26 Score=179.41 Aligned_cols=217 Identities=18% Similarity=0.285 Sum_probs=149.9
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-hhHHHHHHHHhCCCeEEEEeeccc
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-LLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
+..++..+.+.||..+.+.++.+... ......|+||++||++ +++.. .+..++..+.++||+|+++|+||+
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~------~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~ 140 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDR------ALPADAPVLILLPGLT--GGSDDSYVRHMLLRARSKGWRVVVFNSRGC 140 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccc------cCCCCCCEEEEECCCC--CCCCCHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 34566678888998888766643211 0112278999999985 34333 345677788888999999999999
Q ss_pred ccCCCCCC-CCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc-c--eEEEEEcCCcchhhh------
Q 026965 83 GRSTGKAS-LTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE-Q--VVGYVSLGYPFGMMA------ 152 (230)
Q Consensus 83 g~s~~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~-~--~~~~~~~~~~~~~~~------ 152 (230)
|.|..... .......+|+.++++++..+++..+++++||||||.+++.++.+.+ + +.+.+++++|.....
T Consensus 141 G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~ 220 (388)
T PLN02511 141 ADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFH 220 (388)
T ss_pred CCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHh
Confidence 99875422 1222337899999999998888789999999999999998776543 3 677777766643200
Q ss_pred --------h-h-------------hccc-----------------------------------------ccccccCCCCC
Q 026965 153 --------S-I-------------LFGR-----------------------------------------HHKAILKSPKP 169 (230)
Q Consensus 153 --------~-~-------------~~~~-----------------------------------------~~~~~~~~~~p 169 (230)
. . .+.. ....+.++++|
T Consensus 221 ~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vP 300 (388)
T PLN02511 221 KGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVP 300 (388)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCC
Confidence 0 0 0000 00134468999
Q ss_pred EEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhH---HHHHHHHHHHHh
Q 026965 170 KLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYD---AQMVNLILDFIA 228 (230)
Q Consensus 170 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~---~~~~~~i~~fl~ 228 (230)
+|+|+|++|+++|.+.......+..+++++++++++||. +++.++.. ..+.+.+.+||+
T Consensus 301 tLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 301 LLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred eEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 999999999999976543234455688999999999999 77776410 124566666664
No 14
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.95 E-value=1.7e-26 Score=172.74 Aligned_cols=212 Identities=25% Similarity=0.360 Sum_probs=159.2
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
...+..+.+.||..+.|+.+.+.++. ..+||++||+ +.+...|..++..|..+||.|+++|+||||.
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~----------~g~Vvl~HG~---~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~ 74 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPP----------KGVVVLVHGL---GEHSGRYEELADDLAARGFDVYALDLRGHGR 74 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCC----------CcEEEEecCc---hHHHHHHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 34555677789999999999887652 4799999998 7888999999999999999999999999999
Q ss_pred CC-CCCCCCC-c-ccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhhh---hh---
Q 026965 85 ST-GKASLTG-F-AEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMA---SI--- 154 (230)
Q Consensus 85 s~-~~~~~~~-~-~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~---~~--- 154 (230)
|. +...... + ....|+..+++.+.......+++++||||||.+++.++.+. +.+.++++.++.+.... ..
T Consensus 75 S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~ 154 (298)
T COG2267 75 SPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILA 154 (298)
T ss_pred CCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHH
Confidence 97 3322221 2 22577777777766655678999999999999999777655 57778777665443321 00
Q ss_pred --------------hccc-----------------------------------------------ccccccCCCCCEEEE
Q 026965 155 --------------LFGR-----------------------------------------------HHKAILKSPKPKLFV 173 (230)
Q Consensus 155 --------------~~~~-----------------------------------------------~~~~~~~~~~p~l~i 173 (230)
.... .......+++|+|++
T Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll 234 (298)
T COG2267 155 RLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLL 234 (298)
T ss_pred HHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEE
Confidence 0010 001122468999999
Q ss_pred ecCCCcccC-HHHHHHHHHhcc-CceEEEEecCCCcccccChh-hHHHHHHHHHHHHhh
Q 026965 174 MGTRDGFTS-VKQLQNKLSSAA-GRVETHLIEGASHFQMEGPA-YDAQMVNLILDFIAS 229 (230)
Q Consensus 174 ~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~-~~~~~~~~i~~fl~~ 229 (230)
+|++|.+++ .+...+++++.. +++++++++|+.|..+.+++ .++++++.+.+|+.+
T Consensus 235 ~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 235 QGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred ecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 999999999 677777888776 56799999999999554443 447999999999875
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.95 E-value=1.9e-26 Score=172.70 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=142.5
Q ss_pred EeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCC
Q 026965 10 AVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKA 89 (230)
Q Consensus 10 ~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~ 89 (230)
.+...++.+++|...++.+ .|+||++||+ +++...|..+.+.|++ +|+|+++|+||+|.|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~g~~~------------~~~vv~~hG~---~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~ 72 (278)
T TIGR03056 9 RRVTVGPFHWHVQDMGPTA------------GPLLLLLHGT---GASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPF 72 (278)
T ss_pred ceeeECCEEEEEEecCCCC------------CCeEEEEcCC---CCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCcc
Confidence 3444688888887765432 6789999998 6778889999999977 5999999999999997654
Q ss_pred CCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccc-eEEEEEcCCcchhh-----------hhh---
Q 026965 90 SLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGMM-----------ASI--- 154 (230)
Q Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~--- 154 (230)
... ..+++..+.+..+.+.++.++++++||||||.+++.++.+.+. +.+++++.+..... ...
T Consensus 73 ~~~--~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
T TIGR03056 73 RFR--FTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC 150 (278)
T ss_pred ccC--CCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh
Confidence 311 1245555555555566677899999999999999988876654 66666654321100 000
Q ss_pred --------------------hc-------------------cc------------------ccccccCCCCCEEEEecCC
Q 026965 155 --------------------LF-------------------GR------------------HHKAILKSPKPKLFVMGTR 177 (230)
Q Consensus 155 --------------------~~-------------------~~------------------~~~~~~~~~~p~l~i~g~~ 177 (230)
.. .. ....+.++++|+++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~ 230 (278)
T TIGR03056 151 NPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEE 230 (278)
T ss_pred cccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCC
Confidence 00 00 0012345789999999999
Q ss_pred CcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 178 DGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 178 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
|.++|++..+. +.+..++++++.++++||+ +.++|+ ++.+.|.+|++
T Consensus 231 D~~vp~~~~~~-~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~f~~ 278 (278)
T TIGR03056 231 DKAVPPDESKR-AATRVPTATLHVVPGGGHLVHEEQAD---GVVGLILQAAE 278 (278)
T ss_pred CcccCHHHHHH-HHHhccCCeEEEECCCCCcccccCHH---HHHHHHHHHhC
Confidence 99999888774 5555678899999999999 667776 89999999984
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.95 E-value=8.6e-27 Score=172.59 Aligned_cols=191 Identities=21% Similarity=0.310 Sum_probs=136.0
Q ss_pred eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccH
Q 026965 18 KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEV 97 (230)
Q Consensus 18 ~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 97 (230)
++.|+.+.+.++ ..+|+||++||+ .++...|..++..|.+ +|.|+++|+||+|.|....... .
T Consensus 2 ~~~~~~~~~~~~---------~~~~~iv~lhG~---~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~~~----~ 64 (255)
T PRK10673 2 KLNIRAQTAQNP---------HNNSPIVLVHGL---FGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPVMN----Y 64 (255)
T ss_pred cceeeeccCCCC---------CCCCCEEEECCC---CCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCCCC----H
Confidence 356666666543 127899999998 5667788999999977 4999999999999998654322 2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCc-chhh------------------------
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYP-FGMM------------------------ 151 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~-~~~~------------------------ 151 (230)
++..+.+..+.+.++.++++++||||||.+++.++.+. .++.+++++..+ ....
T Consensus 65 ~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T PRK10673 65 PAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQ 144 (255)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHH
Confidence 33333333333556778899999999999999887665 457887776422 1100
Q ss_pred -hhhh---cc-------------c------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCc
Q 026965 152 -ASIL---FG-------------R------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGR 196 (230)
Q Consensus 152 -~~~~---~~-------------~------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~ 196 (230)
...+ .. . .+..+..+++|+|+++|++|..++.+..+ .+.+..++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~-~~~~~~~~ 223 (255)
T PRK10673 145 AAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRD-DLLAQFPQ 223 (255)
T ss_pred HHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHH-HHHHhCCC
Confidence 0000 00 0 00123356789999999999999987766 45666788
Q ss_pred eEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 197 VETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 197 ~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.++++++++||+ .+++|+ ++.+.+.+||++
T Consensus 224 ~~~~~~~~~gH~~~~~~p~---~~~~~l~~fl~~ 254 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPD---AVLRAIRRYLND 254 (255)
T ss_pred cEEEEeCCCCCeeeccCHH---HHHHHHHHHHhc
Confidence 999999999999 677776 899999999975
No 17
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.95 E-value=1.5e-26 Score=189.37 Aligned_cols=218 Identities=17% Similarity=0.161 Sum_probs=162.7
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccc
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
...+.+++++.||.++.++++.|.+. ++..+.|+||++||++. ......+....+.|+.+||.|+.+|+||.+
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~------~~~k~yP~i~~~hGGP~-~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~ 435 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGF------DPRKKYPLIVYIHGGPS-AQVGYSFNPEIQVLASAGYAVLAPNYRGST 435 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCC------CCCCCCCEEEEeCCCCc-cccccccchhhHHHhcCCeEEEEeCCCCCC
Confidence 45788899999999999999999876 23333699999999973 344456788899999999999999999764
Q ss_pred cC-----CCCCCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhh---
Q 026965 84 RS-----TGKASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMAS--- 153 (230)
Q Consensus 84 ~s-----~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~--- 153 (230)
.- .......+..+.+|+.+.++++.+. ++.+|+.++|+|+||+++++++.+.+.+++.+...+.......
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~ 515 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGE 515 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccc
Confidence 42 1222234444589999999977664 5667999999999999999999988888887776543322111
Q ss_pred ----------------------hhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc---cCceEEEEecCCCcc
Q 026965 154 ----------------------ILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLIEGASHF 208 (230)
Q Consensus 154 ----------------------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~ 208 (230)
+..........++++|+|+|||+.|..||.+++++++.++ +.+++++++|+.+|.
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 516 STEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred cchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 1111222345678999999999999999999988766554 467999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhh
Q 026965 209 QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 209 ~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.. ++....+++.+.+|+++
T Consensus 596 ~~~-~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 596 FSR-PENRVKVLKEILDWFKR 615 (620)
T ss_pred CCC-chhHHHHHHHHHHHHHH
Confidence 544 34334666667777654
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=1.2e-25 Score=175.63 Aligned_cols=206 Identities=16% Similarity=0.119 Sum_probs=148.7
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCC-chhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGC-QGLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
+..+++.++..+|..|.++++.|... ++ .|+||++||+ ++. ...|..+++.|+++||+|+++|+||+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~~------~~---~P~Vli~gG~---~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~ 233 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKGD------GP---FPTVLVCGGL---DSLQTDYYRLFRDYLAPRGIAMLTIDMPSV 233 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCCC------CC---ccEEEEeCCc---ccchhhhHHHHHHHHHhCCCEEEEECCCCC
Confidence 46788999988887899999988632 12 6777777775 333 35677888999999999999999999
Q ss_pred ccCCCCCCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhhh-------
Q 026965 83 GRSTGKASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMA------- 152 (230)
Q Consensus 83 g~s~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~------- 152 (230)
|.|......... ......+++++... ++.++|+++|||+||++++.++... ++++++|+++++.....
T Consensus 234 G~s~~~~~~~d~--~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~ 311 (414)
T PRK05077 234 GFSSKWKLTQDS--SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQ 311 (414)
T ss_pred CCCCCCCccccH--HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhh
Confidence 998754221111 12334677777654 4778999999999999999888765 47899988876653110
Q ss_pred -------hhh---ccc---c---------------ccc-ccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEec
Q 026965 153 -------SIL---FGR---H---------------HKA-ILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIE 203 (230)
Q Consensus 153 -------~~~---~~~---~---------------~~~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (230)
..+ +.. . ... ..++++|+|+++|++|+++|++.++ .+.+..++.+++++|
T Consensus 312 ~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~-~l~~~~~~~~l~~i~ 390 (414)
T PRK05077 312 QVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSR-LIASSSADGKLLEIP 390 (414)
T ss_pred hchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHH-HHHHhCCCCeEEEcc
Confidence 000 000 0 000 1357899999999999999999988 556666889999999
Q ss_pred CCCcccccChhhHHHHHHHHHHHHhh
Q 026965 204 GASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 204 ~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
++ |. .+.++ ++++.+.+||++
T Consensus 391 ~~-~~-~e~~~---~~~~~i~~wL~~ 411 (414)
T PRK05077 391 FK-PV-YRNFD---KALQEISDWLED 411 (414)
T ss_pred CC-Cc-cCCHH---HHHHHHHHHHHH
Confidence 86 32 34444 888999999875
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=4.3e-26 Score=176.20 Aligned_cols=199 Identities=25% Similarity=0.325 Sum_probs=139.6
Q ss_pred CCc-eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 15 DGV-KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 15 ~g~-~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
+|. +++|...++.+. ....|+|||+||+ +++...|..+...|.+ +|.|+++|+||+|.|+..... .
T Consensus 69 ~g~~~i~Y~~~G~g~~--------~~~gp~lvllHG~---~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~-~ 135 (360)
T PLN02679 69 KGEYSINYLVKGSPEV--------TSSGPPVLLVHGF---GASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGF-S 135 (360)
T ss_pred CCceeEEEEEecCccc--------CCCCCeEEEECCC---CCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCc-c
Confidence 455 788887765311 0115789999998 6778889999999987 699999999999999765332 1
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh-c-ccceEEEEEcCCcchh---------hh----------
Q 026965 94 FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD-E-IEQVVGYVSLGYPFGM---------MA---------- 152 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~-~-~~~~~~~~~~~~~~~~---------~~---------- 152 (230)
+ ..++..+.+..+.+.++.++++++||||||.+++.++. . +.++.++++++++... ..
T Consensus 136 ~-~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (360)
T PLN02679 136 Y-TMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLI 214 (360)
T ss_pred c-cHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHH
Confidence 1 23444444444445667789999999999999997764 3 4678888877643110 00
Q ss_pred ----------hhh---------c--------cc------------------------------------ccccccCCCCC
Q 026965 153 ----------SIL---------F--------GR------------------------------------HHKAILKSPKP 169 (230)
Q Consensus 153 ----------~~~---------~--------~~------------------------------------~~~~~~~~~~p 169 (230)
..+ . .. ....+.++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 294 (360)
T PLN02679 215 DFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLP 294 (360)
T ss_pred HHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCC
Confidence 000 0 00 00123457899
Q ss_pred EEEEecCCCcccCHHHH----HHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhhC
Q 026965 170 KLFVMGTRDGFTSVKQL----QNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 170 ~l~i~g~~D~~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~~ 230 (230)
+|+++|++|+++|++.. .+.+.+..+++++++++++||+ +.+.|+ ++.+.|.+||+++
T Consensus 295 tLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe---~~~~~I~~FL~~~ 357 (360)
T PLN02679 295 ILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPD---LVHEKLLPWLAQL 357 (360)
T ss_pred EEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHH---HHHHHHHHHHHhc
Confidence 99999999999987632 1234445678999999999999 777787 9999999999864
No 20
>PLN02965 Probable pheophorbidase
Probab=99.95 E-value=7.5e-26 Score=167.45 Aligned_cols=181 Identities=17% Similarity=0.252 Sum_probs=131.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCC-CcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPT-NRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~-~~i~l~ 119 (230)
.-+|||+||+ +.+...|..+.+.|.+.||+|+++|+||+|.|+...... + ..+++.+.+..+.+.++. ++++++
T Consensus 3 ~~~vvllHG~---~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~-~-~~~~~a~dl~~~l~~l~~~~~~~lv 77 (255)
T PLN02965 3 EIHFVFVHGA---SHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTV-S-SSDQYNRPLFALLSDLPPDHKVILV 77 (255)
T ss_pred ceEEEEECCC---CCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcccc-C-CHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 3459999998 567778999999998889999999999999997543311 1 134444444444455665 599999
Q ss_pred EecchHHHHHHhhhcc-cceEEEEEcCCc---ch-----hhh-----------------------------hhh----cc
Q 026965 120 GSSAGAPIAGSAVDEI-EQVVGYVSLGYP---FG-----MMA-----------------------------SIL----FG 157 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~---~~-----~~~-----------------------------~~~----~~ 157 (230)
||||||.+++.++.++ +++.+++++++. .. ... ... +.
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN 157 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhc
Confidence 9999999999887654 667777776543 00 000 000 00
Q ss_pred cc--------------------------cccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cc
Q 026965 158 RH--------------------------HKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QM 210 (230)
Q Consensus 158 ~~--------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~ 210 (230)
.. ...+..+++|+++++|++|..+|++..+ .+.+..+++++++++++||+ +.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~-~~~~~~~~a~~~~i~~~GH~~~~ 236 (255)
T PLN02965 158 QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQD-VMVENWPPAQTYVLEDSDHSAFF 236 (255)
T ss_pred CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHH-HHHHhCCcceEEEecCCCCchhh
Confidence 00 0012247899999999999999998776 56666788999999999999 78
Q ss_pred cChhhHHHHHHHHHHHHhhC
Q 026965 211 EGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 211 ~~~~~~~~~~~~i~~fl~~~ 230 (230)
++|+ ++.+.|.+|++++
T Consensus 237 e~p~---~v~~~l~~~~~~~ 253 (255)
T PLN02965 237 SVPT---TLFQYLLQAVSSL 253 (255)
T ss_pred cCHH---HHHHHHHHHHHHh
Confidence 8888 8899999988764
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=7e-26 Score=170.11 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=125.2
Q ss_pred ceeEEEECCCCCCCCCchhhH---HHHHHHHhCCCeEEEEeecccccCCCCCCCCCc--ccHHHHHHHHHHHHhhCCCCc
Q 026965 41 SLAIVLVHPYSILGGCQGLLK---GIASGLANKGFKAVTFDMRGVGRSTGKASLTGF--AEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~--~~~~d~~~~~~~l~~~~~~~~ 115 (230)
.|+||++||++ .+...|. .....+.+.||+|+++|+||+|.|+........ ...+++.+ +.+.++.++
T Consensus 30 ~~~ivllHG~~---~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~----~l~~l~~~~ 102 (282)
T TIGR03343 30 GEAVIMLHGGG---PGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG----LMDALDIEK 102 (282)
T ss_pred CCeEEEECCCC---CchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHH----HHHHcCCCC
Confidence 56899999984 4444443 334566677899999999999999865322111 11334433 335668889
Q ss_pred EEEEEecchHHHHHHhhhccc-ceEEEEEcCCcch-----------h---hhh------------h----hccc------
Q 026965 116 ILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFG-----------M---MAS------------I----LFGR------ 158 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~-----------~---~~~------------~----~~~~------ 158 (230)
++++||||||.+++.++.+.| ++.++++++++.. . ... . .+..
T Consensus 103 ~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (282)
T TIGR03343 103 AHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEE 182 (282)
T ss_pred eeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHH
Confidence 999999999999998887654 6777777654210 0 000 0 0000
Q ss_pred --------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCC
Q 026965 159 --------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGAS 206 (230)
Q Consensus 159 --------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (230)
....+.++++|+++++|++|.+++++.+++ +.+..+++++++++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~~~~~i~~ag 261 (282)
T TIGR03343 183 LLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDAQLHVFSRCG 261 (282)
T ss_pred HHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCCEEEEeCCCC
Confidence 001234678999999999999999888774 55556899999999999
Q ss_pred cc-cccChhhHHHHHHHHHHHHhh
Q 026965 207 HF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 207 H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|+ ..++|+ .+.+.|.+|+++
T Consensus 262 H~~~~e~p~---~~~~~i~~fl~~ 282 (282)
T TIGR03343 262 HWAQWEHAD---AFNRLVIDFLRN 282 (282)
T ss_pred cCCcccCHH---HHHHHHHHHhhC
Confidence 99 778887 899999999863
No 22
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.95 E-value=7.4e-26 Score=164.93 Aligned_cols=203 Identities=27% Similarity=0.393 Sum_probs=152.3
Q ss_pred eEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 8 SCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
+..+.+-+|.++++..-++.+ +|+|+++||+ ......|+.....|+.+||+|+++|+||+|.|+.
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~------------gP~illlHGf---Pe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~ 87 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGD------------GPIVLLLHGF---PESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDA 87 (322)
T ss_pred ceeeEEEccEEEEEEeecCCC------------CCEEEEEccC---CccchhhhhhhhhhhhcceEEEecCCCCCCCCCC
Confidence 344444577777777765544 8999999998 6888889999999999999999999999999998
Q ss_pred CCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh-cccceEEEEEcCCcchh--------hhhh----
Q 026965 88 KASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD-EIEQVVGYVSLGYPFGM--------MASI---- 154 (230)
Q Consensus 88 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~--------~~~~---- 154 (230)
+.....+. +..+...+..+.+.++.++++++||++|+.+|..++. +++++.+.+.+..+... ....
T Consensus 88 P~~~~~Yt-~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~ 166 (322)
T KOG4178|consen 88 PPHISEYT-IDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKS 166 (322)
T ss_pred CCCcceee-HHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcc
Confidence 87755554 3445555555557778999999999999999997776 45677888877544330 0000
Q ss_pred ------------------------------------------------h---------------------------cccc
Q 026965 155 ------------------------------------------------L---------------------------FGRH 159 (230)
Q Consensus 155 ------------------------------------------------~---------------------------~~~~ 159 (230)
+ +.+.
T Consensus 167 ~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~ 246 (322)
T KOG4178|consen 167 YYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRN 246 (322)
T ss_pred ceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhC
Confidence 0 0001
Q ss_pred ----cccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCce-EEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 160 ----HKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRV-ETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 160 ----~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.....++++|+++++|+.|.+.+.......+++..+.. +.++++|+||+ ..++|+ ++.+.+.+|+++
T Consensus 247 w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~---~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 247 WEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQ---EVNQAILGFINS 319 (322)
T ss_pred chhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHH---HHHHHHHHHHHh
Confidence 11234678999999999999988664444677766654 78899999999 778887 999999999975
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.95 E-value=4.3e-26 Score=168.71 Aligned_cols=179 Identities=18% Similarity=0.248 Sum_probs=128.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+||++||+ +++...|..+.+.|.+ +|+|+++|+||+|.|....... . ..++..+.+..+.+.++.++++++|
T Consensus 13 ~~~iv~lhG~---~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~-~-~~~~~~~~~~~~i~~~~~~~~~l~G 86 (257)
T TIGR03611 13 APVVVLSSGL---GGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPG-Y-SIAHMADDVLQLLDALNIERFHFVG 86 (257)
T ss_pred CCEEEEEcCC---CcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCccc-C-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 7889999998 5667788888888876 6999999999999997643221 1 2344444444444566778999999
Q ss_pred ecchHHHHHHhhhccc-ceEEEEEcCCcchhh---h-------h----------------h-----hcc-----------
Q 026965 121 SSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMM---A-------S----------------I-----LFG----------- 157 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~---~-------~----------------~-----~~~----------- 157 (230)
||+||.+++.++...+ .+.+++++++..... . . . +..
T Consensus 87 ~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
T TIGR03611 87 HALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEA 166 (257)
T ss_pred echhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhh
Confidence 9999999998876554 566666654311100 0 0 0 000
Q ss_pred ----------------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChh
Q 026965 158 ----------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPA 214 (230)
Q Consensus 158 ----------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~ 214 (230)
.....+.++++|+++++|++|.++|++.++...+ ..++.+++.++++||. .+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~ 245 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAA-ALPNAQLKLLPYGGHASNVTDPE 245 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHH-hcCCceEEEECCCCCCccccCHH
Confidence 0011244678999999999999999988875444 4577899999999999 667776
Q ss_pred hHHHHHHHHHHHHhh
Q 026965 215 YDAQMVNLILDFIAS 229 (230)
Q Consensus 215 ~~~~~~~~i~~fl~~ 229 (230)
++.+.|.+||++
T Consensus 246 ---~~~~~i~~fl~~ 257 (257)
T TIGR03611 246 ---TFNRALLDFLKT 257 (257)
T ss_pred ---HHHHHHHHHhcC
Confidence 899999999864
No 24
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=8e-26 Score=169.74 Aligned_cols=200 Identities=22% Similarity=0.254 Sum_probs=143.6
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccc
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
+.++...++. +|.+++|...+ . +++|||+||+ +.+...|..+.+.|.+. |+|+++|+||+|
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~G---~-----------~~~iv~lHG~---~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G 72 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDEG---T-----------GPPILLCHGN---PTWSFLYRDIIVALRDR-FRCVAPDYLGFG 72 (286)
T ss_pred ccccceEEEc-CCcEEEEEECC---C-----------CCEEEEECCC---CccHHHHHHHHHHHhCC-cEEEEECCCCCC
Confidence 3455556664 66678776543 2 6789999998 46667788888888765 999999999999
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcCCcchh--------h---
Q 026965 84 RSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFGM--------M--- 151 (230)
Q Consensus 84 ~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~--------~--- 151 (230)
.|+.+.... ...++..+.+..+.++++.++++++||||||.+++.++.. +.++.++++++++... .
T Consensus 73 ~S~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 150 (286)
T PRK03204 73 LSERPSGFG--YQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRV 150 (286)
T ss_pred CCCCCCccc--cCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHH
Confidence 997654321 1257777777777788888999999999999999977754 4577777765432100 0
Q ss_pred -------h---------hhhcc-----cc-------------------------------ccccc---------CCCCCE
Q 026965 152 -------A---------SILFG-----RH-------------------------------HKAIL---------KSPKPK 170 (230)
Q Consensus 152 -------~---------~~~~~-----~~-------------------------------~~~~~---------~~~~p~ 170 (230)
. ...+. .. ...+. .+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pt 230 (286)
T PRK03204 151 MSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPT 230 (286)
T ss_pred hccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCe
Confidence 0 00000 00 00000 017999
Q ss_pred EEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHH
Q 026965 171 LFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl 227 (230)
++++|++|.++++....+.+.+..++.++++++++||+ +++.|+ ++.+.|.+|+
T Consensus 231 liI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe---~~~~~i~~~~ 285 (286)
T PRK03204 231 LLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPD---RIAAAIIERF 285 (286)
T ss_pred EEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHH---HHHHHHHHhc
Confidence 99999999998766544467777889999999999999 778887 9999999997
No 25
>PRK10566 esterase; Provisional
Probab=99.95 E-value=1.7e-25 Score=165.09 Aligned_cols=180 Identities=16% Similarity=0.172 Sum_probs=125.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCc--------ccHHHHHHHHHHHHhh--
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGF--------AEVEDVIAVCKWVSEN-- 110 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~--------~~~~d~~~~~~~l~~~-- 110 (230)
.|+||++||+ +++...|..+++.|+++||.|+++|+||+|.+......... ...+|+..+++++.++
T Consensus 27 ~p~vv~~HG~---~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 27 LPTVFFYHGF---TSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCEEEEeCCC---CcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7899999998 56666788899999999999999999999976322111110 1246677777777665
Q ss_pred CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcC-Ccch-hhhhhhcc-----------------------cccccccC
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLG-YPFG-MMASILFG-----------------------RHHKAILK 165 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~-----------------------~~~~~~~~ 165 (230)
++.++++++|||+||.+++.++.+.+++.+.+.+. .... ......+. .....+.+
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQ 183 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhh
Confidence 46789999999999999999888777776655432 2211 00000000 00112334
Q ss_pred C-CCCEEEEecCCCcccCHHHHHHHHHhccC-----ceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 166 S-PKPKLFVMGTRDGFTSVKQLQNKLSSAAG-----RVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 166 ~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+ ++|+|++||++|.++|+++++.+.+.+.. +++++.+++++|.+. + ...+.+.+||++
T Consensus 184 i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~----~~~~~~~~fl~~ 247 (249)
T PRK10566 184 LADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--P----EALDAGVAFFRQ 247 (249)
T ss_pred cCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--H----HHHHHHHHHHHh
Confidence 4 68999999999999999988866554432 368888999999852 2 456777777765
No 26
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=2.5e-26 Score=157.36 Aligned_cols=183 Identities=19% Similarity=0.204 Sum_probs=142.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCc-ccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGF-AEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~-~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
+.+|+++||+ .++....+.+.++|.++||.|.+|.+||||......-..+. ...+++.+..+++.++ +.+.|.++
T Consensus 15 ~~AVLllHGF---TGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~ 90 (243)
T COG1647 15 NRAVLLLHGF---TGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVV 90 (243)
T ss_pred CEEEEEEecc---CCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 6899999999 57888899999999999999999999999987643322222 2257777777777654 67899999
Q ss_pred EecchHHHHHHhhhcccceEEEEEcCCcchhhhh-h-------------------------------------------h
Q 026965 120 GSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMAS-I-------------------------------------------L 155 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------------------------~ 155 (230)
|.||||.+++.++.+.| +++++.++.|...... . +
T Consensus 91 GlSmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~ 169 (243)
T COG1647 91 GLSMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKL 169 (243)
T ss_pred eecchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 99999999999998887 7888888877642110 0 0
Q ss_pred cccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc-CceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 156 FGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 156 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.......+..|..|+++++|.+|+.+|.+.+.-.+.... .+.++.+++++||.+..+.+ .+++.+.+..||+.
T Consensus 170 i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E-rd~v~e~V~~FL~~ 243 (243)
T COG1647 170 IKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE-RDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh-HHHHHHHHHHHhhC
Confidence 001223455789999999999999999999987777775 46899999999999554433 45889999999873
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.94 E-value=1.9e-25 Score=167.72 Aligned_cols=197 Identities=17% Similarity=0.239 Sum_probs=136.2
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
.++.++.|....+.+. .++||++||++ ++....|..+...+.+.||.|+++|+||+|.|........
T Consensus 9 ~~~~~~~~~~~~~~~~-----------~~~vl~~hG~~--g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 75 (288)
T TIGR01250 9 VDGGYHLFTKTGGEGE-----------KIKLLLLHGGP--GMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE 75 (288)
T ss_pred CCCCeEEEEeccCCCC-----------CCeEEEEcCCC--CccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc
Confidence 4566677766654432 67899999974 4445556666677776699999999999999986543221
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCcchhh------hh-------------
Q 026965 94 FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMM------AS------------- 153 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~------~~------------- 153 (230)
....+++.+.+..+.+.++.++++++|||+||.+++.++...+ .+.+++++++..... ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (288)
T TIGR01250 76 LWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAI 155 (288)
T ss_pred cccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHH
Confidence 1224666666666667778888999999999999998876554 567766654321100 00
Q ss_pred -------------------hhc-----c--------------------------------------cccccccCCCCCEE
Q 026965 154 -------------------ILF-----G--------------------------------------RHHKAILKSPKPKL 171 (230)
Q Consensus 154 -------------------~~~-----~--------------------------------------~~~~~~~~~~~p~l 171 (230)
... . .....+.++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 235 (288)
T TIGR01250 156 KRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTL 235 (288)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEE
Confidence 000 0 00012345789999
Q ss_pred EEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 172 FVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 172 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
+++|++|.+ +++..+ .+.+..++.++++++++||+ +.++|+ ++.+.|.+||+
T Consensus 236 ii~G~~D~~-~~~~~~-~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~ 288 (288)
T TIGR01250 236 LTVGEFDTM-TPEAAR-EMQELIAGSRLVVFPDGSHMTMIEDPE---VYFKLLSDFIR 288 (288)
T ss_pred EEecCCCcc-CHHHHH-HHHHhccCCeEEEeCCCCCCcccCCHH---HHHHHHHHHhC
Confidence 999999985 566665 45555678899999999999 777777 99999999984
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.94 E-value=5.1e-26 Score=167.41 Aligned_cols=177 Identities=20% Similarity=0.288 Sum_probs=128.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+||++||+ +.+...|..+++.|.+ ||+|+++|+||+|.|+...... ..++..+.+..+.+.++.++++++|
T Consensus 13 ~~~li~~hg~---~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~~~~~i~~~~~~~v~liG 85 (251)
T TIGR02427 13 APVLVFINSL---GTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPEGPY---SIEDLADDVLALLDHLGIERAVFCG 85 (251)
T ss_pred CCeEEEEcCc---ccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCCceEEEE
Confidence 7899999997 6777788888888864 7999999999999986543322 2455555555555666778999999
Q ss_pred ecchHHHHHHhhhcc-cceEEEEEcCCcchhhh------------------------hhhcc------------------
Q 026965 121 SSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMA------------------------SILFG------------------ 157 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~------------------------~~~~~------------------ 157 (230)
||+||.+++.++... +.+.++++++++..... ..++.
T Consensus 86 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (251)
T TIGR02427 86 LSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNML 165 (251)
T ss_pred eCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHH
Confidence 999999999887665 45666555543211000 00000
Q ss_pred ------------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHH
Q 026965 158 ------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQ 218 (230)
Q Consensus 158 ------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~ 218 (230)
.....+.++++|+++++|++|..+|.+.... +.+..++.+++++++++|. +++.++ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~p~---~ 241 (251)
T TIGR02427 166 VRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAGHIPCVEQPE---A 241 (251)
T ss_pred HhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCCCcccccChH---H
Confidence 0012234678999999999999999987775 4444567899999999999 777776 8
Q ss_pred HHHHHHHHHh
Q 026965 219 MVNLILDFIA 228 (230)
Q Consensus 219 ~~~~i~~fl~ 228 (230)
+.+.+.+|++
T Consensus 242 ~~~~i~~fl~ 251 (251)
T TIGR02427 242 FNAALRDFLR 251 (251)
T ss_pred HHHHHHHHhC
Confidence 8999999974
No 29
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=1.5e-25 Score=171.03 Aligned_cols=204 Identities=21% Similarity=0.294 Sum_probs=142.7
Q ss_pred eecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch----------------------hh----HHHH
Q 026965 11 VETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG----------------------LL----KGIA 64 (230)
Q Consensus 11 ~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~----------------------~~----~~~~ 64 (230)
+.+.||.+|.++.|.|+++ +.+|+++||++ ++.. .| ..++
T Consensus 2 ~~~~~g~~l~~~~~~~~~~-----------kg~v~i~HG~~---eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~ 67 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNA-----------IGIIVLIHGLK---SHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWI 67 (332)
T ss_pred ccCCCCCeEEEeeeeccCC-----------eEEEEEECCCc---hhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHH
Confidence 4567999999999988644 78999999984 3332 11 4689
Q ss_pred HHHHhCCCeEEEEeecccccCCCCCCCC----Ccc-cHHHHHHHHHHHHh-------------------hCC-CCcEEEE
Q 026965 65 SGLANKGFKAVTFDMRGVGRSTGKASLT----GFA-EVEDVIAVCKWVSE-------------------NLP-TNRILLV 119 (230)
Q Consensus 65 ~~l~~~g~~v~~~d~~g~g~s~~~~~~~----~~~-~~~d~~~~~~~l~~-------------------~~~-~~~i~l~ 119 (230)
+.|.++||.|+++|+||||.|.+..... .+. .++|+..+++.+.. ..+ ..+++++
T Consensus 68 ~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 147 (332)
T TIGR01607 68 ENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYII 147 (332)
T ss_pred HHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEe
Confidence 9999999999999999999988653211 111 25677777776654 223 4689999
Q ss_pred EecchHHHHHHhhhcc---------cceEEEEEcCCcchhh----------h----------hhhcc-----c-------
Q 026965 120 GSSAGAPIAGSAVDEI---------EQVVGYVSLGYPFGMM----------A----------SILFG-----R------- 158 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~---------~~~~~~~~~~~~~~~~----------~----------~~~~~-----~------- 158 (230)
||||||.+++.++... ..+.+++++++++... . ..... .
T Consensus 148 GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~ 227 (332)
T TIGR01607 148 GLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKS 227 (332)
T ss_pred eccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccC
Confidence 9999999999877532 1466777655442100 0 00000 0
Q ss_pred --------------------------------ccccccCC--CCCEEEEecCCCcccCHHHHHHHHHhcc-CceEEEEec
Q 026965 159 --------------------------------HHKAILKS--PKPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVETHLIE 203 (230)
Q Consensus 159 --------------------------------~~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~ 203 (230)
....+..+ ++|+|+++|++|.+++++.++.++++.. +++++++++
T Consensus 228 ~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~ 307 (332)
T TIGR01607 228 PYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLE 307 (332)
T ss_pred hhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEEC
Confidence 00011233 6899999999999999999887777654 578999999
Q ss_pred CCCcccccChhhHHHHHHHHHHHHhh
Q 026965 204 GASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 204 ~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+++|..+.+++ .+++.+.+.+||++
T Consensus 308 g~~H~i~~E~~-~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 308 DMDHVITIEPG-NEEVLKKIIEWISN 332 (332)
T ss_pred CCCCCCccCCC-HHHHHHHHHHHhhC
Confidence 99999554433 35899999999864
No 30
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=6.3e-25 Score=172.61 Aligned_cols=199 Identities=14% Similarity=0.197 Sum_probs=141.0
Q ss_pred cCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH-HHHHHH---hCCCeEEEEeecccccCCCC
Q 026965 13 TTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG-IASGLA---NKGFKAVTFDMRGVGRSTGK 88 (230)
Q Consensus 13 ~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~g~s~~~ 88 (230)
+.++.++++...+|.+. +. .++|||+||+ +++...|.. +...|. +.+|+|+++|+||||.|+.+
T Consensus 182 ~~~~~~l~~~~~gp~~~------~~---k~~VVLlHG~---~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p 249 (481)
T PLN03087 182 SSSNESLFVHVQQPKDN------KA---KEDVLFIHGF---ISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP 249 (481)
T ss_pred eeCCeEEEEEEecCCCC------CC---CCeEEEECCC---CccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC
Confidence 34567899999988753 11 5789999998 566667764 445554 36899999999999999765
Q ss_pred CCCCCcccHHHHHHHH-HHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhhh--------------
Q 026965 89 ASLTGFAEVEDVIAVC-KWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMA-------------- 152 (230)
Q Consensus 89 ~~~~~~~~~~d~~~~~-~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~-------------- 152 (230)
... .+ ..++..+.+ ..+.+.++.++++++||||||.+++.++.++ ..+.++++++++.....
T Consensus 250 ~~~-~y-tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 327 (481)
T PLN03087 250 ADS-LY-TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVA 327 (481)
T ss_pred CCC-cC-CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhc
Confidence 321 12 234444444 3556777889999999999999999877655 45778887764321000
Q ss_pred --h------------hhc-------------------------c-----c-------------cc---------------
Q 026965 153 --S------------ILF-------------------------G-----R-------------HH--------------- 160 (230)
Q Consensus 153 --~------------~~~-------------------------~-----~-------------~~--------------- 160 (230)
. .++ . . .+
T Consensus 328 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~ 407 (481)
T PLN03087 328 PRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLD 407 (481)
T ss_pred ccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhh
Confidence 0 000 0 0 00
Q ss_pred c---c-ccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cc-cChhhHHHHHHHHHHHHhh
Q 026965 161 K---A-ILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QM-EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 161 ~---~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~-~~~~~~~~~~~~i~~fl~~ 229 (230)
. . ..++++|+|+++|++|.++|++..+. +.+..+++++++++++||. ++ ++|+ ++++.|.+|++.
T Consensus 408 ~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e~p~---~fa~~L~~F~~~ 478 (481)
T PLN03087 408 GYLDHVRDQLKCDVAIFHGGDDELIPVECSYA-VKAKVPRARVKVIDDKDHITIVVGRQK---EFARELEEIWRR 478 (481)
T ss_pred hHHHHHHHhCCCCEEEEEECCCCCCCHHHHHH-HHHhCCCCEEEEeCCCCCcchhhcCHH---HHHHHHHHHhhc
Confidence 0 0 01478999999999999999998885 5556688999999999999 54 7786 899999998763
No 31
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.94 E-value=1.3e-25 Score=153.22 Aligned_cols=206 Identities=20% Similarity=0.279 Sum_probs=155.1
Q ss_pred CccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHH-HhCCCeEEEEeec
Q 026965 2 SSYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGL-ANKGFKAVTFDMR 80 (230)
Q Consensus 2 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l-~~~g~~v~~~d~~ 80 (230)
.++..+++.+.+.|..++..++...+++ .|+++++|+. .++.......+.-+ ...+.+|+.+++|
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~E~S-----------~pTlLyfh~N---AGNmGhr~~i~~~fy~~l~mnv~ivsYR 115 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLSESS-----------RPTLLYFHAN---AGNMGHRLPIARVFYVNLKMNVLIVSYR 115 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecccCC-----------CceEEEEccC---CCcccchhhHHHHHHHHcCceEEEEEee
Confidence 4678899999999999999998875543 8999999997 56655555555544 4558999999999
Q ss_pred ccccCCCCCCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcch--------
Q 026965 81 GVGRSTGKASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFG-------- 149 (230)
Q Consensus 81 g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~-------- 149 (230)
|+|.|++.+...+.. .|..++++++..+ ++..+++++|.|+||++|..++... .++.++++ -..+.
T Consensus 116 GYG~S~GspsE~GL~--lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~iv-ENTF~SIp~~~i~ 192 (300)
T KOG4391|consen 116 GYGKSEGSPSEEGLK--LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIV-ENTFLSIPHMAIP 192 (300)
T ss_pred ccccCCCCcccccee--ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeee-echhccchhhhhh
Confidence 999999999988874 7888999999776 5678999999999999999777654 44444443 22221
Q ss_pred --------hhhhhhccccc---ccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc-CceEEEEecCCCcc--cccChhh
Q 026965 150 --------MMASILFGRHH---KAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVETHLIEGASHF--QMEGPAY 215 (230)
Q Consensus 150 --------~~~~~~~~~~~---~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~--~~~~~~~ 215 (230)
..+.+.+...+ ..+..-+.|.|++.|.+|++|||-..++++.... ..+++..||++.|+ ++.+
T Consensus 193 ~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~d--- 269 (300)
T KOG4391|consen 193 LVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICD--- 269 (300)
T ss_pred eeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEec---
Confidence 12222222222 2344557899999999999999999998888775 35789999999999 3333
Q ss_pred HHHHHHHHHHHHhh
Q 026965 216 DAQMVNLILDFIAS 229 (230)
Q Consensus 216 ~~~~~~~i~~fl~~ 229 (230)
-.++.|.+||.+
T Consensus 270 --GYfq~i~dFlaE 281 (300)
T KOG4391|consen 270 --GYFQAIEDFLAE 281 (300)
T ss_pred --cHHHHHHHHHHH
Confidence 346677777754
No 32
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=1.7e-24 Score=165.17 Aligned_cols=213 Identities=18% Similarity=0.244 Sum_probs=142.8
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc-hhhHHHHHHHHhCCCeEEEEeecccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ-GLLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
..+...+...||..+...+...... .++.|+||++||++ ++.. ..+..+++.|.++||+|+++|+||+|
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~--------~~~~p~vll~HG~~--g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g 99 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQ--------ARHKPRLVLFHGLE--GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCS 99 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCcc--------CCCCCEEEEeCCCC--CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 3444557778887776654322111 12278999999985 3322 34566889999999999999999998
Q ss_pred cCCCCC-CCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-ccc--eEEEEEcCCcchhhhh------
Q 026965 84 RSTGKA-SLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-IEQ--VVGYVSLGYPFGMMAS------ 153 (230)
Q Consensus 84 ~s~~~~-~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-~~~--~~~~~~~~~~~~~~~~------ 153 (230)
.+.... ........+|+..+++++.++++..+++++||||||.+++.++.. .++ +.+++++++|+.....
T Consensus 100 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~ 179 (324)
T PRK10985 100 GEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQ 179 (324)
T ss_pred CCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhh
Confidence 775432 222223378999999999988888899999999999987765543 333 7888888877532100
Q ss_pred --------hh---------------ccc---------------------------------------ccccccCCCCCEE
Q 026965 154 --------IL---------------FGR---------------------------------------HHKAILKSPKPKL 171 (230)
Q Consensus 154 --------~~---------------~~~---------------------------------------~~~~~~~~~~p~l 171 (230)
.+ ... ....+.++++|++
T Consensus 180 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~l 259 (324)
T PRK10985 180 GFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTL 259 (324)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEE
Confidence 00 000 0012346789999
Q ss_pred EEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccCh--hhHHHHHHHHHHHHh
Q 026965 172 FVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGP--AYDAQMVNLILDFIA 228 (230)
Q Consensus 172 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~--~~~~~~~~~i~~fl~ 228 (230)
+++|++|++++++.... +.+..++.++++++++||. +++.. .....+-+.+.+|+.
T Consensus 260 ii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred EEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 99999999999877664 4556678999999999999 65432 111134455555553
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=3.8e-25 Score=163.88 Aligned_cols=173 Identities=21% Similarity=0.329 Sum_probs=126.6
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+|||+||+ +++...|..+.+.|.+. |+|+++|+||+|.|+.... . ..+++.+. +.+ +..++++++|
T Consensus 13 ~~~ivllHG~---~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~---~-~~~~~~~~---l~~-~~~~~~~lvG 80 (256)
T PRK10349 13 NVHLVLLHGW---GLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFGA---L-SLADMAEA---VLQ-QAPDKAIWLG 80 (256)
T ss_pred CCeEEEECCC---CCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCCC---C-CHHHHHHH---HHh-cCCCCeEEEE
Confidence 3569999998 67888999999999876 9999999999999975321 1 23343333 322 3568999999
Q ss_pred ecchHHHHHHhhhc-ccceEEEEEcCCcchhh----------------------------hhhh----ccc---------
Q 026965 121 SSAGAPIAGSAVDE-IEQVVGYVSLGYPFGMM----------------------------ASIL----FGR--------- 158 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~~----------------------------~~~~----~~~--------- 158 (230)
|||||.+++.++.+ +..+.++++++++.... ..+. ...
T Consensus 81 hS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (256)
T PRK10349 81 WSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA 160 (256)
T ss_pred ECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHH
Confidence 99999999988765 45677777765421100 0000 000
Q ss_pred ---------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cc
Q 026965 159 ---------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QM 210 (230)
Q Consensus 159 ---------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~ 210 (230)
....+.++++|+++++|++|.++|.+..+ .+.+..+++++++++++||+ +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~i~~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 161 LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVP-MLDKLWPHSESYIFAKAAHAPFI 239 (256)
T ss_pred HHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHH-HHHHhCCCCeEEEeCCCCCCccc
Confidence 00123467999999999999999987766 66777789999999999999 77
Q ss_pred cChhhHHHHHHHHHHHHhh
Q 026965 211 EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 211 ~~~~~~~~~~~~i~~fl~~ 229 (230)
++|+ ++.+.+.+|-++
T Consensus 240 e~p~---~f~~~l~~~~~~ 255 (256)
T PRK10349 240 SHPA---EFCHLLVALKQR 255 (256)
T ss_pred cCHH---HHHHHHHHHhcc
Confidence 8887 888888888654
No 34
>PRK06489 hypothetical protein; Provisional
Probab=99.93 E-value=2.3e-24 Score=166.85 Aligned_cols=214 Identities=14% Similarity=0.142 Sum_probs=139.8
Q ss_pred eeeEEeec---CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhH--HHHHHH-------HhCCCe
Q 026965 6 VESCAVET---TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLK--GIASGL-------ANKGFK 73 (230)
Q Consensus 6 ~~~~~~~~---~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~~~l-------~~~g~~ 73 (230)
.++..+.. .+|.+++|..++..+.. .-.+..|+||++||+ +++...|. .+.+.| ..++|+
T Consensus 36 ~~~~~~~~~~~~~g~~i~y~~~G~~~~~-----~~~~~gpplvllHG~---~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 107 (360)
T PRK06489 36 ARDFTFHSGETLPELRLHYTTLGTPHRN-----ADGEIDNAVLVLHGT---GGSGKSFLSPTFAGELFGPGQPLDASKYF 107 (360)
T ss_pred ccceeccCCCCcCCceEEEEecCCCCcc-----cccCCCCeEEEeCCC---CCchhhhccchhHHHhcCCCCcccccCCE
Confidence 34445544 46788888877653200 000014689999998 44544453 455444 245799
Q ss_pred EEEEeecccccCCCCCCCC----CcccHHHHHH-HHHHHHhhCCCCcEE-EEEecchHHHHHHhhhcc-cceEEEEEcCC
Q 026965 74 AVTFDMRGVGRSTGKASLT----GFAEVEDVIA-VCKWVSENLPTNRIL-LVGSSAGAPIAGSAVDEI-EQVVGYVSLGY 146 (230)
Q Consensus 74 v~~~d~~g~g~s~~~~~~~----~~~~~~d~~~-~~~~l~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~ 146 (230)
|+++|+||||.|+.+.... ....++++.+ ++..+.++++.+++. ++||||||.+++.++.++ .++.+++++++
T Consensus 108 Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 108 IILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred EEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 9999999999997543211 0112455543 344455777888885 899999999999877655 56777776654
Q ss_pred cchh-------h----hh------------------h------hc--------------cc-------------------
Q 026965 147 PFGM-------M----AS------------------I------LF--------------GR------------------- 158 (230)
Q Consensus 147 ~~~~-------~----~~------------------~------~~--------------~~------------------- 158 (230)
.... . .. . .+ ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PRK06489 188 QPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTA 267 (360)
T ss_pred CcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhc
Confidence 2100 0 00 0 00 00
Q ss_pred ----------------ccccccCCCCCEEEEecCCCcccCHHHHH-HHHHhccCceEEEEecCC----CcccccChhhHH
Q 026965 159 ----------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQ-NKLSSAAGRVETHLIEGA----SHFQMEGPAYDA 217 (230)
Q Consensus 159 ----------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~H~~~~~~~~~~ 217 (230)
....+.++++|+|+++|++|.++|++... +.+.+..++.++++++++ ||..+++|+
T Consensus 268 ~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~e~P~--- 344 (360)
T PRK06489 268 DANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTTGSAK--- 344 (360)
T ss_pred CHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccccCHH---
Confidence 00123357999999999999999988752 356667788999999996 999667776
Q ss_pred HHHHHHHHHHhhC
Q 026965 218 QMVNLILDFIASL 230 (230)
Q Consensus 218 ~~~~~i~~fl~~~ 230 (230)
++.+.|.+||+++
T Consensus 345 ~~~~~i~~FL~~~ 357 (360)
T PRK06489 345 FWKAYLAEFLAQV 357 (360)
T ss_pred HHHHHHHHHHHhc
Confidence 8999999999763
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=1.4e-24 Score=159.61 Aligned_cols=171 Identities=19% Similarity=0.193 Sum_probs=123.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+|||+||+ +++...|..+.+.| + +|+|+++|+||+|.|+..... ..++..+.+..+.+.++.++++++|
T Consensus 2 ~p~vvllHG~---~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~l~~~l~~~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGL---LGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISVD----GFADVSRLLSQTLQSYNILPYWLVG 72 (242)
T ss_pred CCEEEEECCC---CCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcccc----CHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 5789999998 57778999999988 3 599999999999999864432 2344444444444566788999999
Q ss_pred ecchHHHHHHhhhcc-cc-eEEEEEcCCcchhhh------------hh---------------hc---------c-----
Q 026965 121 SSAGAPIAGSAVDEI-EQ-VVGYVSLGYPFGMMA------------SI---------------LF---------G----- 157 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~-~~-~~~~~~~~~~~~~~~------------~~---------------~~---------~----- 157 (230)
|||||.+++.++.+. ++ +.++++++++..... .+ ++ .
T Consensus 73 ~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQ 152 (242)
T ss_pred ECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHH
Confidence 999999999887765 54 888887654321100 00 00 0
Q ss_pred --------------------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cc
Q 026965 158 --------------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QM 210 (230)
Q Consensus 158 --------------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~ 210 (230)
.....+.++++|+++++|++|+.+. . ..++ .++++++++++||+ +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~----~~~~--~~~~~~~i~~~gH~~~~ 225 (242)
T PRK11126 153 LVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-A----LAQQ--LALPLHVIPNAGHNAHR 225 (242)
T ss_pred HHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-H----HHHH--hcCeEEEeCCCCCchhh
Confidence 0001234678999999999998653 1 1122 26899999999999 77
Q ss_pred cChhhHHHHHHHHHHHHhhC
Q 026965 211 EGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 211 ~~~~~~~~~~~~i~~fl~~~ 230 (230)
+.|+ ++.+.|.+|++++
T Consensus 226 e~p~---~~~~~i~~fl~~~ 242 (242)
T PRK11126 226 ENPA---AFAASLAQILRLI 242 (242)
T ss_pred hChH---HHHHHHHHHHhhC
Confidence 8887 9999999999864
No 36
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.93 E-value=7.6e-25 Score=160.69 Aligned_cols=171 Identities=19% Similarity=0.292 Sum_probs=124.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|+||++||+ +++...|..+.+.|.+ +|+|+++|+||+|.|+.... .++.++++.+.+.. .++++++|
T Consensus 4 ~~~iv~~HG~---~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~-------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGW---GMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP-------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCC---CCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC-------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 4789999998 6778889999999986 59999999999999875422 12233333333443 36899999
Q ss_pred ecchHHHHHHhhhcccc-eEEEEEcCCcchh--------------hh---------------hhh----ccc--------
Q 026965 121 SSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGM--------------MA---------------SIL----FGR-------- 158 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~--------------~~---------------~~~----~~~-------- 158 (230)
|||||.+++.++.+.|+ +.+++++++.... .. .+. ...
T Consensus 72 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T TIGR01738 72 WSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDAR 151 (245)
T ss_pred EcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHH
Confidence 99999999988876655 7777765432110 00 000 000
Q ss_pred ----------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-c
Q 026965 159 ----------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-Q 209 (230)
Q Consensus 159 ----------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~ 209 (230)
....+.++++|+++++|++|.++|++..+. +.+..+++++++++++||+ +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 152 ALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELYIFAKAAHAPF 230 (245)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEEEeCCCCCCcc
Confidence 001234689999999999999999888764 4555678999999999999 7
Q ss_pred ccChhhHHHHHHHHHHHH
Q 026965 210 MEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 210 ~~~~~~~~~~~~~i~~fl 227 (230)
.++|+ ++.+.|.+|+
T Consensus 231 ~e~p~---~~~~~i~~fi 245 (245)
T TIGR01738 231 LSHAE---AFCALLVAFK 245 (245)
T ss_pred ccCHH---HHHHHHHhhC
Confidence 78887 9999999885
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.93 E-value=1.6e-24 Score=157.02 Aligned_cols=169 Identities=26% Similarity=0.438 Sum_probs=124.4
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecc
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSA 123 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~ 123 (230)
|||+||+ +++...|..+++.|+ +||.|+++|+||+|.|......... ..++..+.+..+.+.++.++++++|||+
T Consensus 1 vv~~hG~---~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGF---GGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPY-SIEDYAEDLAELLDALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-ST---TTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGG-SHHHHHHHHHHHHHHTTTSSEEEEEETH
T ss_pred eEEECCC---CCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCc-chhhhhhhhhhccccccccccccccccc
Confidence 7999998 677789999999995 7999999999999999876641111 2344444444455666778999999999
Q ss_pred hHHHHHHhhhcc-cceEEEEEcCCcchhhhh--------hh---------------------------------------
Q 026965 124 GAPIAGSAVDEI-EQVVGYVSLGYPFGMMAS--------IL--------------------------------------- 155 (230)
Q Consensus 124 Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~--------------------------------------- 155 (230)
||.+++.++.+. ..+.++++++++...... .+
T Consensus 76 Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (228)
T PF12697_consen 76 GGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRAL 155 (228)
T ss_dssp HHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccc
Confidence 999999888764 578888888776632110 00
Q ss_pred ---------cccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHH
Q 026965 156 ---------FGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVN 221 (230)
Q Consensus 156 ---------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~ 221 (230)
.......+.++++|+++++|++|.+++.+..+. +.+..+++++++++++||+ ++++|+ ++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~~~~p~---~~~~ 227 (228)
T PF12697_consen 156 AEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHFLFLEQPD---EVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSSTHHHHSHH---HHHH
T ss_pred ccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCccHHHCHH---HHhc
Confidence 000012345679999999999999999777764 4555578999999999999 778876 5554
No 38
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=9.5e-24 Score=162.84 Aligned_cols=198 Identities=14% Similarity=0.172 Sum_probs=144.3
Q ss_pred eecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCC
Q 026965 11 VETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKAS 90 (230)
Q Consensus 11 ~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 90 (230)
....++.+++|...++.+ .++|||+||+ +.+...|..+++.|++ +|+|+++|+||+|.|+.+..
T Consensus 109 ~~~~~~~~~~y~~~G~~~------------~~~ivllHG~---~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~ 172 (383)
T PLN03084 109 QASSDLFRWFCVESGSNN------------NPPVLLIHGF---PSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQP 172 (383)
T ss_pred EEcCCceEEEEEecCCCC------------CCeEEEECCC---CCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcc
Confidence 334677888877665432 6789999998 6777889999999986 69999999999999987643
Q ss_pred CC-CcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh----hh-----------
Q 026965 91 LT-GFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM----AS----------- 153 (230)
Q Consensus 91 ~~-~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~----~~----------- 153 (230)
.. .....+++.+.+..+.++++.++++++|||+||.+++.++..+ .++.++++++++.... ..
T Consensus 173 ~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~ 252 (383)
T PLN03084 173 GYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLG 252 (383)
T ss_pred cccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhh
Confidence 21 1122566666666666777788999999999999999887664 5688888887653210 00
Q ss_pred -------h-----hc----------------cc------------------cccc-------c------cCCCCCEEEEe
Q 026965 154 -------I-----LF----------------GR------------------HHKA-------I------LKSPKPKLFVM 174 (230)
Q Consensus 154 -------~-----~~----------------~~------------------~~~~-------~------~~~~~p~l~i~ 174 (230)
. .. .. .... + .++++|+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 253 EIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred hhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 0 00 00 0000 0 13589999999
Q ss_pred cCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 175 GTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 175 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|++|.+++.+..+++.+. .+.++++++++||. ..+.|+ ++.+.|.+|+.+
T Consensus 333 G~~D~~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe---~v~~~I~~Fl~~ 383 (383)
T PLN03084 333 GLRDRWLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGE---ELGGIISGILSK 383 (383)
T ss_pred eCCCCCcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHH---HHHHHHHHHhhC
Confidence 999999998887755554 37899999999999 677777 999999999863
No 39
>PLN02578 hydrolase
Probab=99.93 E-value=4.6e-24 Score=164.72 Aligned_cols=189 Identities=22% Similarity=0.261 Sum_probs=131.8
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
.+|.+++|...+ . +++||++||+ +++...|..+.+.|++ +|.|+++|+||+|.|+.......
T Consensus 73 ~~~~~i~Y~~~g---~-----------g~~vvliHG~---~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~ 134 (354)
T PLN02578 73 WRGHKIHYVVQG---E-----------GLPIVLIHGF---GASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYD 134 (354)
T ss_pred ECCEEEEEEEcC---C-----------CCeEEEECCC---CCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccC
Confidence 356667776543 2 5679999998 5677888888899976 49999999999999987643222
Q ss_pred ccc-HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchh-----------------hh--
Q 026965 94 FAE-VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGM-----------------MA-- 152 (230)
Q Consensus 94 ~~~-~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~-----------------~~-- 152 (230)
... .+++.+++ +.+..++++++|||+||.+++.++.+. ..+.++++++++... ..
T Consensus 135 ~~~~a~~l~~~i----~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (354)
T PLN02578 135 AMVWRDQVADFV----KEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRF 210 (354)
T ss_pred HHHHHHHHHHHH----HHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHH
Confidence 210 23333333 334467899999999999999887655 466777765432100 00
Q ss_pred ---h-------h---------------------hccc----------------------------------------ccc
Q 026965 153 ---S-------I---------------------LFGR----------------------------------------HHK 161 (230)
Q Consensus 153 ---~-------~---------------------~~~~----------------------------------------~~~ 161 (230)
. . .+.. ..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T PLN02578 211 VVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDS 290 (354)
T ss_pred HhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHH
Confidence 0 0 0000 001
Q ss_pred cccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 162 AILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 162 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+.++++|+++++|++|.+++.+.++ .+.+..++.++++++ +||+ +.+.|+ ++.+.|.+|++.
T Consensus 291 ~l~~i~~PvLiI~G~~D~~v~~~~~~-~l~~~~p~a~l~~i~-~GH~~~~e~p~---~~~~~I~~fl~~ 354 (354)
T PLN02578 291 LLSKLSCPLLLLWGDLDPWVGPAKAE-KIKAFYPDTTLVNLQ-AGHCPHDEVPE---QVNKALLEWLSS 354 (354)
T ss_pred HhhcCCCCEEEEEeCCCCCCCHHHHH-HHHHhCCCCEEEEeC-CCCCccccCHH---HHHHHHHHHHhC
Confidence 23457899999999999999988877 456666888998885 8999 677787 999999999863
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.93 E-value=4.4e-24 Score=156.96 Aligned_cols=177 Identities=19% Similarity=0.291 Sum_probs=127.1
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHH-HHHHHhhCCCCcEEEEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAV-CKWVSENLPTNRILLVG 120 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~-~~~l~~~~~~~~i~l~G 120 (230)
|+||++||+ +++...|..+.+.|+ +||.|+++|+||+|.|+.+....... .+++.+. +..+.+.++.++++++|
T Consensus 2 ~~vv~~hG~---~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 2 PVLVFLHGF---LGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYD-FEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CEEEEEcCC---CCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhh-HHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 679999998 677888999999998 68999999999999997653322222 3444433 55666667788999999
Q ss_pred ecchHHHHHHhhhccc-ceEEEEEcCCcchhhh---------------------------hhh-----ccc---------
Q 026965 121 SSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMMA---------------------------SIL-----FGR--------- 158 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~~---------------------------~~~-----~~~--------- 158 (230)
||+||.+++.++.+.+ .+.+++++++...... ..+ +..
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQR 156 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHh
Confidence 9999999998887654 4666666543221100 000 000
Q ss_pred -----------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-
Q 026965 159 -----------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF- 208 (230)
Q Consensus 159 -----------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~- 208 (230)
....+.++++|+++++|++|..++ +..+ .+.+..+++++++++++||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~-~~~~~~~~~~~~~~~~~gH~~ 234 (251)
T TIGR03695 157 QALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAK-EMQKLLPNLTLVIIANAGHNI 234 (251)
T ss_pred HHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHH-HHHhcCCCCcEEEEcCCCCCc
Confidence 001234678999999999998764 3333 45666678999999999999
Q ss_pred cccChhhHHHHHHHHHHHHh
Q 026965 209 QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 209 ~~~~~~~~~~~~~~i~~fl~ 228 (230)
++++++ ++.+.|.+|++
T Consensus 235 ~~e~~~---~~~~~i~~~l~ 251 (251)
T TIGR03695 235 HLENPE---AFAKILLAFLE 251 (251)
T ss_pred CccChH---HHHHHHHHHhC
Confidence 777776 89999999974
No 41
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.93 E-value=1.7e-24 Score=146.76 Aligned_cols=144 Identities=30% Similarity=0.460 Sum_probs=118.6
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHh-hCCCCcEEEEEe
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSE-NLPTNRILLVGS 121 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~-~~~~~~i~l~G~ 121 (230)
+||++||+ +++...|..+++.|+++||.|+.+|+|+++.+.. ..++.++++.+.. ..+.++++++||
T Consensus 1 ~vv~~HG~---~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGW---GGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG---------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTT---TTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH---------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCC---CCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch---------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 58999998 5667789999999999999999999999987721 1456666666533 347899999999
Q ss_pred cchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEE
Q 026965 122 SAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHL 201 (230)
Q Consensus 122 S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 201 (230)
|+||.+++.++...+++++++++++. .....+...+.|+++++|++|+.++++..++.+++...+.++++
T Consensus 69 S~Gg~~a~~~~~~~~~v~~~v~~~~~----------~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 138 (145)
T PF12695_consen 69 SMGGAIAANLAARNPRVKAVVLLSPY----------PDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYI 138 (145)
T ss_dssp THHHHHHHHHHHHSTTESEEEEESES----------SGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEE
T ss_pred ccCcHHHHHHhhhccceeEEEEecCc----------cchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEE
Confidence 99999999888877999999998772 11445567788999999999999999999988888887899999
Q ss_pred ecCCCcc
Q 026965 202 IEGASHF 208 (230)
Q Consensus 202 ~~~~~H~ 208 (230)
++|++|+
T Consensus 139 i~g~~H~ 145 (145)
T PF12695_consen 139 IPGAGHF 145 (145)
T ss_dssp ETTS-TT
T ss_pred eCCCcCc
Confidence 9999995
No 42
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=2.5e-23 Score=155.12 Aligned_cols=209 Identities=19% Similarity=0.181 Sum_probs=144.8
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCC-CCCCchhhHHHHHHHHhCCCeEEEEeecccccC
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSI-LGGCQGLLKGIASGLANKGFKAVTFDMRGVGRS 85 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~-~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 85 (230)
+.+.+. .+|..+.+.++.|.+.. .+.||++||++. ..++...+..+++.|+++||.|+++|+||+|.|
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~~~----------~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S 71 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGASH----------TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDS 71 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCCCC----------CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCC
Confidence 455666 46778999999887532 457777787641 113344567789999999999999999999998
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHhhC-CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhh------------
Q 026965 86 TGKASLTGFAEVEDVIAVCKWVSENL-PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMA------------ 152 (230)
Q Consensus 86 ~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~------------ 152 (230)
.+... ......+|+.++++++++.. +.++++++|||+||.+++.++..++.+.++++++++.....
T Consensus 72 ~~~~~-~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~ 150 (274)
T TIGR03100 72 EGENL-GFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYL 150 (274)
T ss_pred CCCCC-CHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHH
Confidence 75432 11122578999999988765 45789999999999999988877788999998876532100
Q ss_pred ---------h-hh-------------------c--cc-----------ccccccCCCCCEEEEecCCCcccCHHHHH---
Q 026965 153 ---------S-IL-------------------F--GR-----------HHKAILKSPKPKLFVMGTRDGFTSVKQLQ--- 187 (230)
Q Consensus 153 ---------~-~~-------------------~--~~-----------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~--- 187 (230)
. .+ . .. ....+..+++|+++++|++|...+. ...
T Consensus 151 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~-~~~~~~ 229 (274)
T TIGR03100 151 GQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQE-FADSVL 229 (274)
T ss_pred HHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHH-HHHHhc
Confidence 0 00 0 00 0012335789999999999988642 111
Q ss_pred --HHHHh-cc-CceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 188 --NKLSS-AA-GRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 188 --~~~~~-~~-~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
..+.+ .. ++++++.+++++|+... ....+++.+.|.+||++
T Consensus 230 ~~~~~~~~l~~~~v~~~~~~~~~H~l~~-e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 230 GEPAWRGALEDPGIERVEIDGADHTFSD-RVWREWVAARTTEWLRR 274 (274)
T ss_pred cChhhHHHhhcCCeEEEecCCCCccccc-HHHHHHHHHHHHHHHhC
Confidence 22333 22 78999999999997422 23335899999999964
No 43
>PRK07581 hypothetical protein; Validated
Probab=99.92 E-value=4.9e-24 Score=164.00 Aligned_cols=199 Identities=14% Similarity=0.102 Sum_probs=133.4
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHH---HHHHhCCCeEEEEeecccccCCCCCCC
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIA---SGLANKGFKAVTFDMRGVGRSTGKASL 91 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~g~s~~~~~~ 91 (230)
+|.+++|..+++.... +.|+||++||+ +++...|..+. +.|...+|+|+++|+||+|.|+.+...
T Consensus 24 ~~~~l~y~~~G~~~~~---------~~~~vll~~~~---~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~ 91 (339)
T PRK07581 24 PDARLAYKTYGTLNAA---------KDNAILYPTWY---SGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT 91 (339)
T ss_pred CCceEEEEecCccCCC---------CCCEEEEeCCC---CCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCC
Confidence 5677888888763221 15677777776 33433444332 366666799999999999999755321
Q ss_pred ---CCc------ccHHHHHHHHHHHHhhCCCCcE-EEEEecchHHHHHHhhhcc-cceEEEEEcCCcchh----------
Q 026965 92 ---TGF------AEVEDVIAVCKWVSENLPTNRI-LLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGM---------- 150 (230)
Q Consensus 92 ---~~~------~~~~d~~~~~~~l~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~---------- 150 (230)
... ...+|+......+.+.++.+++ +|+||||||.+++.++.++ .++.+++++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~ 171 (339)
T PRK07581 92 PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEG 171 (339)
T ss_pred CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHH
Confidence 111 1135666655556677889995 7999999999999887765 457777666321100
Q ss_pred ------------------------------h----------h-------------h----hh--c----c----------
Q 026965 151 ------------------------------M----------A-------------S----IL--F----G---------- 157 (230)
Q Consensus 151 ------------------------------~----------~-------------~----~~--~----~---------- 157 (230)
. . . .. . .
T Consensus 172 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (339)
T PRK07581 172 LKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWT 251 (339)
T ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHH
Confidence 0 0 0 00 0 0
Q ss_pred --------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecC-CCcc-cccChhhHHHHHH
Q 026965 158 --------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEG-ASHF-QMEGPAYDAQMVN 221 (230)
Q Consensus 158 --------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~H~-~~~~~~~~~~~~~ 221 (230)
.....+.++++|+|+++|++|.++|++..+. +.+..++++++++++ +||. ++++++ ++..
T Consensus 252 ~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~~~~---~~~~ 327 (339)
T PRK07581 252 WQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFGQNP---ADIA 327 (339)
T ss_pred hhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCccccccCcH---HHHH
Confidence 0011233578999999999999999988774 455568899999998 8998 777776 7778
Q ss_pred HHHHHHhh
Q 026965 222 LILDFIAS 229 (230)
Q Consensus 222 ~i~~fl~~ 229 (230)
.|.+||++
T Consensus 328 ~~~~~~~~ 335 (339)
T PRK07581 328 FIDAALKE 335 (339)
T ss_pred HHHHHHHH
Confidence 88888765
No 44
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.92 E-value=1.4e-23 Score=163.56 Aligned_cols=175 Identities=22% Similarity=0.292 Sum_probs=130.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.++|||+||+ +++...|..+...|.+. |+|+++|+||+|.|....... ..+++.+.+..+.+.++..+++++|
T Consensus 131 ~~~vl~~HG~---~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG 203 (371)
T PRK14875 131 GTPVVLIHGF---GGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAG---SLDELAAAVLAFLDALGIERAHLVG 203 (371)
T ss_pred CCeEEEECCC---CCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCC---CHHHHHHHHHHHHHhcCCccEEEEe
Confidence 6789999998 67788899999988875 999999999999986543322 2466666666666778888999999
Q ss_pred ecchHHHHHHhhhcc-cceEEEEEcCCcchhh-------hhh-------------------------------hc-----
Q 026965 121 SSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM-------ASI-------------------------------LF----- 156 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~-------~~~-------------------------------~~----- 156 (230)
||+||.+++.++... .++.++++++++.... ..+ ..
T Consensus 204 ~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (371)
T PRK14875 204 HSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLD 283 (371)
T ss_pred echHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccc
Confidence 999999999777655 4678877775431100 000 00
Q ss_pred --------------c------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhh
Q 026965 157 --------------G------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAY 215 (230)
Q Consensus 157 --------------~------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~ 215 (230)
. .....+.++++|+++++|++|.++|++..+. +..++++.+++++||+ .+++|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~- 358 (371)
T PRK14875 284 GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAA- 358 (371)
T ss_pred cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHH-
Confidence 0 0001344678999999999999999877653 3346899999999999 777776
Q ss_pred HHHHHHHHHHHHhh
Q 026965 216 DAQMVNLILDFIAS 229 (230)
Q Consensus 216 ~~~~~~~i~~fl~~ 229 (230)
++.+.|.+||++
T Consensus 359 --~~~~~i~~fl~~ 370 (371)
T PRK14875 359 --DVNRLLAEFLGK 370 (371)
T ss_pred --HHHHHHHHHhcc
Confidence 899999999975
No 45
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.92 E-value=1.6e-23 Score=140.62 Aligned_cols=199 Identities=25% Similarity=0.431 Sum_probs=154.4
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc--hhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ--GLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
.+.++.+..+-| ++...+-.++ . ++ .|+.|++|.-+..+++. .....++..|.++||.++.+|+||.
T Consensus 3 ~~~~v~i~Gp~G-~le~~~~~~~-~------~~---~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgV 71 (210)
T COG2945 3 HMPTVIINGPAG-RLEGRYEPAK-T------PA---APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGV 71 (210)
T ss_pred CCCcEEecCCcc-cceeccCCCC-C------CC---CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeeccccc
Confidence 456677776666 3666544443 2 22 88999999887655554 3456788999999999999999999
Q ss_pred ccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcE-EEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcccccc
Q 026965 83 GRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRI-LLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFGRHHK 161 (230)
Q Consensus 83 g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
|.|.+..+. +.-+.+|..++++|++++.+..+. .+.|+|+|+++++.++.+.+.....+.+.++... ....
T Consensus 72 G~S~G~fD~-GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~-------~dfs 143 (210)
T COG2945 72 GRSQGEFDN-GIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINA-------YDFS 143 (210)
T ss_pred ccccCcccC-CcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCc-------hhhh
Confidence 999987643 344589999999999998766555 7899999999999999998888888887777662 2233
Q ss_pred cccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 162 AILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 162 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
.+....+|.++++|+.|+++++....++.+. ...+++++++++|++..+-. .+.+.+.+|+
T Consensus 144 ~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~gKl~---~l~~~i~~~l 204 (210)
T COG2945 144 FLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHGKLI---ELRDTIADFL 204 (210)
T ss_pred hccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecccHH---HHHHHHHHHh
Confidence 3455678999999999999999887766555 45788899999999877665 7888888887
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=3.4e-23 Score=154.23 Aligned_cols=179 Identities=16% Similarity=0.185 Sum_probs=123.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhC-CCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENL-PTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~i~l~ 119 (230)
+|+|||+||+ +.+...|..+...|.++||+|+++|+||+|.|...+... ...++..+.+..+.+.+ +.++++++
T Consensus 18 ~p~vvliHG~---~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~lv 92 (273)
T PLN02211 18 PPHFVLIHGI---SGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVILV 92 (273)
T ss_pred CCeEEEECCC---CCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 7899999998 567778999999999889999999999999875433221 11333333333332333 35799999
Q ss_pred EecchHHHHHHhhhcc-cceEEEEEcCCcch-----hhh----------hh--------h-----------c--------
Q 026965 120 GSSAGAPIAGSAVDEI-EQVVGYVSLGYPFG-----MMA----------SI--------L-----------F-------- 156 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~-----~~~----------~~--------~-----------~-------- 156 (230)
||||||.++..++... ..+.++++++.... ... .. . .
T Consensus 93 GhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
T PLN02211 93 GHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI 172 (273)
T ss_pred EECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH
Confidence 9999999999887655 46777777643210 000 00 0 0
Q ss_pred --cc-c---------------c---------ccccCC-CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc
Q 026965 157 --GR-H---------------H---------KAILKS-PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 157 --~~-~---------------~---------~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
.. . . ....++ ++|+++|.|++|..+|++..+.+.+. .+..+++.++ +||.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~-~~~~~~~~l~-~gH~ 250 (273)
T PLN02211 173 LYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKR-WPPSQVYELE-SDHS 250 (273)
T ss_pred HhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHh-CCccEEEEEC-CCCC
Confidence 00 0 0 001123 68999999999999999887755444 4566888897 7999
Q ss_pred -cccChhhHHHHHHHHHHHHhh
Q 026965 209 -QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 209 -~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+++.|+ ++.+.|.+....
T Consensus 251 p~ls~P~---~~~~~i~~~a~~ 269 (273)
T PLN02211 251 PFFSTPF---LLFGLLIKAAAS 269 (273)
T ss_pred ccccCHH---HHHHHHHHHHHH
Confidence 889998 888888776543
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=2.3e-23 Score=157.37 Aligned_cols=212 Identities=21% Similarity=0.293 Sum_probs=144.2
Q ss_pred eeEEeecCCCc-eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeeccccc
Q 026965 7 ESCAVETTDGV-KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGR 84 (230)
Q Consensus 7 ~~~~~~~~~g~-~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~ 84 (230)
+...+....|. .+...+++.....+ ...+...++||++||+ +++...|......|.+. |+.|+++|++|+|.
T Consensus 26 ~~~~i~~~~g~~~~~~~w~~~~~~~~---~~~~~~~~pvlllHGF---~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~ 99 (326)
T KOG1454|consen 26 RSTSIEIPWGPLTIRSKWIPNLDKYG---SPGDKDKPPVLLLHGF---GASSFSWRRVVPLLSKAKGLRVLAIDLPGHGY 99 (326)
T ss_pred cceEEEcccCCceeEEEEeccceecc---CCCCCCCCcEEEeccc---cCCcccHhhhccccccccceEEEEEecCCCCc
Confidence 44455545553 45555555542100 0111238899999999 56888899998888776 59999999999996
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEE---EcCCcchhhhhh------
Q 026965 85 STGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYV---SLGYPFGMMASI------ 154 (230)
Q Consensus 85 s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~---~~~~~~~~~~~~------ 154 (230)
++..+....+. ..+....+..+......+++.++|||+||.+|+.+|... ..+..++ +++++.......
T Consensus 100 ~s~~~~~~~y~-~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~ 178 (326)
T KOG1454|consen 100 SSPLPRGPLYT-LRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRR 178 (326)
T ss_pred CCCCCCCCcee-hhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHH
Confidence 65554444343 455555555555566677799999999999999777655 4566666 443332110000
Q ss_pred -------------------------------------------------hc--------------------c---ccccc
Q 026965 155 -------------------------------------------------LF--------------------G---RHHKA 162 (230)
Q Consensus 155 -------------------------------------------------~~--------------------~---~~~~~ 162 (230)
.. . .....
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T KOG1454|consen 179 LLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSL 258 (326)
T ss_pred hhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHh
Confidence 00 0 00011
Q ss_pred ccCCC-CCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 163 ILKSP-KPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 163 ~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.++. +|+++++|++|+++|.+.+..+.++. +++++++++++||. .++.|+ ++++.|..|+++
T Consensus 259 ~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe---~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 259 IKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPE---EVAALLRSFIAR 323 (326)
T ss_pred hccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHH---HHHHHHHHHHHH
Confidence 23445 99999999999999999888655555 99999999999999 667787 999999999975
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=4.4e-23 Score=161.15 Aligned_cols=180 Identities=19% Similarity=0.208 Sum_probs=120.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCc-ccH-HHHHHHHHHHHhhCCCCcEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGF-AEV-EDVIAVCKWVSENLPTNRILL 118 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~-~~~-~d~~~~~~~l~~~~~~~~i~l 118 (230)
.|+||++||+ +.+...|......|+++ |.|+++|+||+|.|+........ ... +.+.+.+..+.+.++.+++++
T Consensus 105 ~p~vvllHG~---~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 105 APTLVMVHGY---GASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCEEEEECCC---CcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 7899999998 56667777778888875 99999999999999764322111 111 122223333334567789999
Q ss_pred EEecchHHHHHHhhhccc-ceEEEEEcCCcchhh----------------------------------------------
Q 026965 119 VGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMM---------------------------------------------- 151 (230)
Q Consensus 119 ~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~---------------------------------------------- 151 (230)
+||||||.+++.++.+++ .+.++++++++....
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999998877654 577777664321000
Q ss_pred hhhh---cc----------------------------------------------cccccccCCCCCEEEEecCCCcccC
Q 026965 152 ASIL---FG----------------------------------------------RHHKAILKSPKPKLFVMGTRDGFTS 182 (230)
Q Consensus 152 ~~~~---~~----------------------------------------------~~~~~~~~~~~p~l~i~g~~D~~~~ 182 (230)
.... +. .....+.++++|+++++|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 0000 00 0001234578999999999998765
Q ss_pred HHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 183 VKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
.......+.....+++++++++||+ +.++|+ ++.+.+.+|++
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~---~f~~~l~~~~~ 383 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPS---GFHSAVLYACR 383 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHH---HHHHHHHHHHH
Confidence 4444455555456899999999999 778887 66666665554
No 49
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=5.7e-23 Score=150.52 Aligned_cols=200 Identities=21% Similarity=0.312 Sum_probs=135.5
Q ss_pred eecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCC
Q 026965 11 VETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKAS 90 (230)
Q Consensus 11 ~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~ 90 (230)
+...++.++......+.+.. .+++|++||+ +.....|..-.+.|++ ..+|+++|++|+|.|+.+.-
T Consensus 70 v~i~~~~~iw~~~~~~~~~~----------~~plVliHGy---GAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F 135 (365)
T KOG4409|consen 70 VRIPNGIEIWTITVSNESAN----------KTPLVLIHGY---GAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKF 135 (365)
T ss_pred eecCCCceeEEEeecccccC----------CCcEEEEecc---chhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCC
Confidence 33345656666655555432 7889999998 5667777777888888 59999999999999998765
Q ss_pred CCCccc-HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhhhhh------------hc
Q 026965 91 LTGFAE-VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMASI------------LF 156 (230)
Q Consensus 91 ~~~~~~-~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~------------~~ 156 (230)
...... ...+.+.++.-+...+..+.+|+|||+||+++..+|.++ +++..+++++ |++..... +.
T Consensus 136 ~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvs-P~Gf~~~~~~~~~~~~~~~~w~ 214 (365)
T KOG4409|consen 136 SIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVS-PWGFPEKPDSEPEFTKPPPEWY 214 (365)
T ss_pred CCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEec-ccccccCCCcchhhcCCChHHH
Confidence 544432 234445555556667889999999999999999887765 5666666653 33222110 00
Q ss_pred -------------------c----------------c-----------------------------------------cc
Q 026965 157 -------------------G----------------R-----------------------------------------HH 160 (230)
Q Consensus 157 -------------------~----------------~-----------------------------------------~~ 160 (230)
+ + ..
T Consensus 215 ~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~ 294 (365)
T KOG4409|consen 215 KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMI 294 (365)
T ss_pred hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHH
Confidence 0 0 00
Q ss_pred cccc--CCCCCEEEEecCCCcccCHHHHHHHHHh-ccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 161 KAIL--KSPKPKLFVMGTRDGFTSVKQLQNKLSS-AAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 161 ~~~~--~~~~p~l~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.+. +-.+|+++|+|++|.+= .....+..+. ....++.+++|++||. ++++|+ .+.+.+.+++++
T Consensus 295 ~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~---~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPE---FFNQIVLEECDK 363 (365)
T ss_pred HHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHH---HHHHHHHHHHhc
Confidence 0111 22599999999998753 3333333333 3345899999999999 889998 777888777764
No 50
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=161.74 Aligned_cols=194 Identities=15% Similarity=0.172 Sum_probs=132.7
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-----------hhHHHHH---HHHhCCCeEEEEee
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-----------LLKGIAS---GLANKGFKAVTFDM 79 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-----------~~~~~~~---~l~~~g~~v~~~d~ 79 (230)
.+|.+++|..+++. .+++|++||+. +++.. .|..+.. .|...+|+|+++|+
T Consensus 43 ~~~~~l~y~~~G~~-------------~~p~vll~g~~--~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl 107 (343)
T PRK08775 43 LEDLRLRYELIGPA-------------GAPVVFVAGGI--SAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDF 107 (343)
T ss_pred CCCceEEEEEeccC-------------CCCEEEEecCC--CcccccccccCCCCCCcchhccCCCCccCccccEEEEEeC
Confidence 36778888877652 22366666653 23222 5777775 56444699999999
Q ss_pred cccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCc-EEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchh------h
Q 026965 80 RGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNR-ILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGM------M 151 (230)
Q Consensus 80 ~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~------~ 151 (230)
||+|.|.... + ..++..+.+..+.+.++.++ ++++||||||++++.++.++ .++.+++++++.... .
T Consensus 108 ~G~g~s~~~~----~-~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~ 182 (343)
T PRK08775 108 IGADGSLDVP----I-DTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAW 182 (343)
T ss_pred CCCCCCCCCC----C-CHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHH
Confidence 9999874321 1 13444444445556677766 47999999999999877665 467778777542100 0
Q ss_pred h--------------------h---------h--------hcccc-----------------------------------
Q 026965 152 A--------------------S---------I--------LFGRH----------------------------------- 159 (230)
Q Consensus 152 ~--------------------~---------~--------~~~~~----------------------------------- 159 (230)
. . . .+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 262 (343)
T PRK08775 183 RALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRL 262 (343)
T ss_pred HHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHH
Confidence 0 0 0 00000
Q ss_pred -------cccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecC-CCcc-cccChhhHHHHHHHHHHHHhhC
Q 026965 160 -------HKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEG-ASHF-QMEGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 160 -------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~H~-~~~~~~~~~~~~~~i~~fl~~~ 230 (230)
...+.++++|+|+++|++|.++|++..+...+...++.+++++++ +||. ++++|+ ++.+.|.+||+++
T Consensus 263 ~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe---~~~~~l~~FL~~~ 339 (343)
T PRK08775 263 SESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETD---RIDAILTTALRST 339 (343)
T ss_pred HHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHH---HHHHHHHHHHHhc
Confidence 012346789999999999999999888766666667899999985 9999 888888 9999999999763
No 51
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.91 E-value=1e-22 Score=154.44 Aligned_cols=201 Identities=22% Similarity=0.218 Sum_probs=132.5
Q ss_pred eEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 8 SCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
+.++...+|.+++|..+++.+ .++||++||++ ++... ..+...+...+|+|+++|+||+|.|+.
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~------------~~~lvllHG~~---~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~ 69 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPD------------GKPVVFLHGGP---GSGTD-PGCRRFFDPETYRIVLFDQRGCGKSTP 69 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCC------------CCEEEEECCCC---CCCCC-HHHHhccCccCCEEEEECCCCCCCCCC
Confidence 346666688899998765432 45799999974 22222 234445555689999999999999985
Q ss_pred CCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCcch---------------hh
Q 026965 88 KASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFG---------------MM 151 (230)
Q Consensus 88 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~---------------~~ 151 (230)
....... ..+++.+.+..+.+.++.++++++||||||.+++.++.+.+ .+.++++++.... ..
T Consensus 70 ~~~~~~~-~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 148 (306)
T TIGR01249 70 HACLEEN-TTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIY 148 (306)
T ss_pred CCCcccC-CHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhC
Confidence 4332222 24666666777777778889999999999999998876654 4666666543110 00
Q ss_pred h-----------hhhc-------------------------------c------------------------c-------
Q 026965 152 A-----------SILF-------------------------------G------------------------R------- 158 (230)
Q Consensus 152 ~-----------~~~~-------------------------------~------------------------~------- 158 (230)
. .... . .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (306)
T TIGR01249 149 PDAWQRFMDSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFV 228 (306)
T ss_pred HHHHHHHhhhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHH
Confidence 0 0000 0 0
Q ss_pred ----------ccccccCC-CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 159 ----------HHKAILKS-PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 159 ----------~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
....+.++ ++|+++++|++|.++|++.++.+ .+..++.++++++++||... .++..+++.+.+.+||
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~-~~~~~~~~~~~~~~~gH~~~-~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 229 NKGFLDVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWAL-HKAFPEAELKVTNNAGHSAF-DPNNLAALVHALETYL 306 (306)
T ss_pred HhchhcCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHH-HHhCCCCEEEEECCCCCCCC-ChHHHHHHHHHHHHhC
Confidence 00112234 58999999999999999887754 44557889999999999954 3333445555555553
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=1e-22 Score=167.49 Aligned_cols=196 Identities=20% Similarity=0.309 Sum_probs=130.3
Q ss_pred ecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCC
Q 026965 12 ETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASL 91 (230)
Q Consensus 12 ~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~ 91 (230)
...+|.+|+|+.+++.+ .|+|||+||+ +++...|..+.+.| ..||.|+++|+||||.|+.....
T Consensus 8 ~~~~g~~l~~~~~g~~~------------~~~ivllHG~---~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~ 71 (582)
T PRK05855 8 VSSDGVRLAVYEWGDPD------------RPTVVLVHGY---PDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRT 71 (582)
T ss_pred EeeCCEEEEEEEcCCCC------------CCeEEEEcCC---CchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcc
Confidence 34688899998876532 6789999998 57778899999999 45799999999999999865433
Q ss_pred CCcccHHHHHHHHHHHHhhCCCC-cEEEEEecchHHHHHHhhhccc---ceEEEEEcCCcchhh----------------
Q 026965 92 TGFAEVEDVIAVCKWVSENLPTN-RILLVGSSAGAPIAGSAVDEIE---QVVGYVSLGYPFGMM---------------- 151 (230)
Q Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~-~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~~~~~~~~~~---------------- 151 (230)
..+. .+++.+.+..+.+.++.. +++++||||||.+++.++..+. .+...+.+..+....
T Consensus 72 ~~~~-~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (582)
T PRK05855 72 AAYT-LARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRR 150 (582)
T ss_pred cccC-HHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhh
Confidence 2222 233333333333444444 5999999999999987765532 222222222211000
Q ss_pred --------hh-----------------------hhc---cc---------------------------------cccccc
Q 026965 152 --------AS-----------------------ILF---GR---------------------------------HHKAIL 164 (230)
Q Consensus 152 --------~~-----------------------~~~---~~---------------------------------~~~~~~ 164 (230)
.. .+. .. ......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (582)
T PRK05855 151 LARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRER 230 (582)
T ss_pred hhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccC
Confidence 00 000 00 000122
Q ss_pred CCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 165 KSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 165 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+++|+++++|++|.+++++..+. +.+..++.++++++ +||+ +.++|+ ++.+.|.+|+++
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e~p~---~~~~~i~~fl~~ 291 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMSHPQ---VLAAAVAEFVDA 291 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhhChh---HHHHHHHHHHHh
Confidence 378999999999999999888774 44555677888887 5899 777887 888999999875
No 53
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.90 E-value=1e-21 Score=143.18 Aligned_cols=195 Identities=22% Similarity=0.313 Sum_probs=138.9
Q ss_pred eeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc-hhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 6 VESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ-GLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 6 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
.+...+.++||..+...+..++... ..|.||++||.. |++. .....+...+.++||.++++++|||+.
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~---------~~P~vVl~HGL~--G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~ 117 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAA---------KKPLVVLFHGLE--GSSNSPYARGLMRALSRRGWLVVVFHFRGCSG 117 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCcccc---------CCceEEEEeccC--CCCcCHHHHHHHHHHHhcCCeEEEEecccccC
Confidence 3444666677765665555543321 268999999996 3433 355678899999999999999999988
Q ss_pred CCC-CCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHH-Hhhhc--ccceEEEEEcCCcchhhhhh------
Q 026965 85 STG-KASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAG-SAVDE--IEQVVGYVSLGYPFGMMASI------ 154 (230)
Q Consensus 85 s~~-~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~-~~~~~--~~~~~~~~~~~~~~~~~~~~------ 154 (230)
+.. .+.....-..+|+..++++++......++..+|+|+||.+.. .+++. ...+.+.+.++.|+......
T Consensus 118 ~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~ 197 (345)
T COG0429 118 EANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSG 197 (345)
T ss_pred CcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCc
Confidence 764 333333334699999999999988899999999999995544 55543 34566777776665442110
Q ss_pred ----hccc------------------------------------------------------------ccccccCCCCCE
Q 026965 155 ----LFGR------------------------------------------------------------HHKAILKSPKPK 170 (230)
Q Consensus 155 ----~~~~------------------------------------------------------------~~~~~~~~~~p~ 170 (230)
++.+ ....+.+|++|+
T Consensus 198 ~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~Pt 277 (345)
T COG0429 198 FSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPT 277 (345)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccce
Confidence 0000 112345789999
Q ss_pred EEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-ccc
Q 026965 171 LFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QME 211 (230)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~ 211 (230)
|+|++.+|++++++...+......+++.+..-+.+||. ++.
T Consensus 278 Lii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 278 LIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred EEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 99999999999987766544447789999999999999 766
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.90 E-value=8.5e-23 Score=157.66 Aligned_cols=199 Identities=19% Similarity=0.195 Sum_probs=134.4
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc--h---------hhHHHH---HHHHhCCCeEEEEee
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ--G---------LLKGIA---SGLANKGFKAVTFDM 79 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~--~---------~~~~~~---~~l~~~g~~v~~~d~ 79 (230)
.+|.+|+|..+++.+.. +.++||++||++ ++. . .|..+. ..|...+|.|+++|+
T Consensus 13 ~~~~~~~y~~~g~~~~~---------~~~~vll~Hg~~---~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 80 (351)
T TIGR01392 13 LSDVRVAYETYGTLNAE---------RSNAVLVCHALT---GDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNV 80 (351)
T ss_pred cCCceEEEEeccccCCC---------CCCEEEEcCCcC---cchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecC
Confidence 36788999999874321 157899999984 322 1 356554 356567899999999
Q ss_pred cc--cccCCCCC---CC------CCcccHHHHHHHHHHHHhhCCCCc-EEEEEecchHHHHHHhhhcc-cceEEEEEcCC
Q 026965 80 RG--VGRSTGKA---SL------TGFAEVEDVIAVCKWVSENLPTNR-ILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGY 146 (230)
Q Consensus 80 ~g--~g~s~~~~---~~------~~~~~~~d~~~~~~~l~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~ 146 (230)
|| +|.|.... .. .....++++.+.+..+.+.++.++ ++++||||||.+++.++.++ ..+.+++++++
T Consensus 81 ~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (351)
T TIGR01392 81 LGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLAT 160 (351)
T ss_pred CCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEcc
Confidence 99 45543211 10 011236777777767777888888 99999999999999777654 45777777654
Q ss_pred cchhhh-----------h---------------------h-------------------hccc-----------------
Q 026965 147 PFGMMA-----------S---------------------I-------------------LFGR----------------- 158 (230)
Q Consensus 147 ~~~~~~-----------~---------------------~-------------------~~~~----------------- 158 (230)
...... . . .+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 240 (351)
T TIGR01392 161 SARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQ 240 (351)
T ss_pred CCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccch
Confidence 321000 0 0 0000
Q ss_pred ---------------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEE
Q 026965 159 ---------------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVET 199 (230)
Q Consensus 159 ---------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 199 (230)
....+.++++|+|+|+|++|.++|++.++.+.+ ..++.++
T Consensus 241 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~-~i~~~~~ 319 (351)
T TIGR01392 241 VESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAK-ALPAAGL 319 (351)
T ss_pred HHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHH-HHhhcCC
Confidence 012234678999999999999999998885444 4455554
Q ss_pred E-----EecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 200 H-----LIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 200 ~-----~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
+ +++++||. ++++|+ ++.+.|.+||+
T Consensus 320 ~v~~~~i~~~~GH~~~le~p~---~~~~~l~~FL~ 351 (351)
T TIGR01392 320 RVTYVEIESPYGHDAFLVETD---QVEELIRGFLR 351 (351)
T ss_pred ceEEEEeCCCCCcchhhcCHH---HHHHHHHHHhC
Confidence 3 55789999 788887 99999999985
No 55
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.90 E-value=3.4e-22 Score=144.43 Aligned_cols=192 Identities=22% Similarity=0.236 Sum_probs=126.9
Q ss_pred eEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc-CCCCCCCC--Cc--
Q 026965 20 NARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR-STGKASLT--GF-- 94 (230)
Q Consensus 20 ~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~-s~~~~~~~--~~-- 94 (230)
..++..|++. ++.|.||++|+. .+-......+++.|+++||.|++||+.+-.. ........ ..
T Consensus 2 ~ay~~~P~~~---------~~~~~Vvv~~d~---~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~ 69 (218)
T PF01738_consen 2 DAYVARPEGG---------GPRPAVVVIHDI---FGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRE 69 (218)
T ss_dssp EEEEEEETTS---------SSEEEEEEE-BT---TBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHH
T ss_pred eEEEEeCCCC---------CCCCEEEEEcCC---CCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHH
Confidence 4567777653 228999999998 4555778889999999999999999753322 11111000 00
Q ss_pred -------ccHHHHHHHHHHHHhhC--CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcccccccccC
Q 026965 95 -------AEVEDVIAVCKWVSENL--PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFGRHHKAILK 165 (230)
Q Consensus 95 -------~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (230)
....++.+.+++++++- +.++|.++|+|+||.+++.++...+.+.+.+..-++.. .........+
T Consensus 70 ~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~------~~~~~~~~~~ 143 (218)
T PF01738_consen 70 LFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSP------PPPPLEDAPK 143 (218)
T ss_dssp CHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSS------GGGHHHHGGG
T ss_pred HHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCC------CCcchhhhcc
Confidence 11466777788887764 56899999999999999999888778888888755111 1112234556
Q ss_pred CCCCEEEEecCCCcccCHHHHHHH---HHhccCceEEEEecCCCccccc------ChhhHHHHHHHHHHHHhh
Q 026965 166 SPKPKLFVMGTRDGFTSVKQLQNK---LSSAAGRVETHLIEGASHFQME------GPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 166 ~~~p~l~i~g~~D~~~~~~~~~~~---~~~~~~~~~~~~~~~~~H~~~~------~~~~~~~~~~~i~~fl~~ 229 (230)
+++|+++++|++|+.++.+..+.. +++...++++++|||++|.+.. ++...++.++.+.+||++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 789999999999999998875543 3344678999999999999653 233456778888899875
No 56
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=4.5e-21 Score=144.68 Aligned_cols=204 Identities=17% Similarity=0.257 Sum_probs=151.4
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
..++..++.+||..+...+..+...... ...+..|+||++||.++ ++.....+.++..+.++||++++++.||+|.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~---~~~~~~P~vvilpGltg-~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCR---TDDGTDPIVVILPGLTG-GSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccC---CCCCCCcEEEEecCCCC-CChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 4566778888999999998876554210 11234799999999973 2333455678888899999999999999988
Q ss_pred CCCC-CCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc---ccceEEEEEcCCcchhh--hhhhccc
Q 026965 85 STGK-ASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE---IEQVVGYVSLGYPFGMM--ASILFGR 158 (230)
Q Consensus 85 s~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~ 158 (230)
++-. +........+|+..++++++++++..++..+|+||||.+...++.. ...+.+++.++.|++.. ...+...
T Consensus 168 ~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~ 247 (409)
T KOG1838|consen 168 SKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETP 247 (409)
T ss_pred CccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcc
Confidence 8743 3444444579999999999999999999999999999999977643 24578888888888742 1110000
Q ss_pred ------------------------------------------------------------------ccccccCCCCCEEE
Q 026965 159 ------------------------------------------------------------------HHKAILKSPKPKLF 172 (230)
Q Consensus 159 ------------------------------------------------------------------~~~~~~~~~~p~l~ 172 (230)
....+.++++|+|+
T Consensus 248 ~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ 327 (409)
T KOG1838|consen 248 LYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLC 327 (409)
T ss_pred cchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEE
Confidence 11234478999999
Q ss_pred EecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccC
Q 026965 173 VMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEG 212 (230)
Q Consensus 173 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~ 212 (230)
|++.+|+++|++..-....+..+++-+++-.-+||. +++.
T Consensus 328 ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 328 INAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred EecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 999999999986544344455678888888889999 7765
No 57
>PLN02872 triacylglycerol lipase
Probab=99.89 E-value=5e-22 Score=153.66 Aligned_cols=218 Identities=18% Similarity=0.247 Sum_probs=142.1
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh------HHHHHHHHhCCCeEEE
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL------KGIASGLANKGFKAVT 76 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~------~~~~~~l~~~g~~v~~ 76 (230)
++..|+..+++.||..|....+.+.+.. ....++|+|+++||.. .+...| ..++..|+++||+|++
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~-----~~~~~~~~Vll~HGl~---~ss~~w~~~~~~~sla~~La~~GydV~l 112 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPR-----LGSQRGPPVLLQHGLF---MAGDAWFLNSPEQSLGFILADHGFDVWV 112 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCC-----CCCCCCCeEEEeCccc---ccccceeecCcccchHHHHHhCCCCccc
Confidence 5788999999999999999887543221 1112367899999984 333333 3567789999999999
Q ss_pred EeecccccCCCCCC---------CCCccc--HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc---ceEEEE
Q 026965 77 FDMRGVGRSTGKAS---------LTGFAE--VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE---QVVGYV 142 (230)
Q Consensus 77 ~d~~g~g~s~~~~~---------~~~~~~--~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~ 142 (230)
+|.||++.+.+... ...+.+ ..|+.++++++.+.- .+++.++|||+||.+++.++.++. .+..++
T Consensus 113 ~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~ 191 (395)
T PLN02872 113 GNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAA 191 (395)
T ss_pred ccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHhhChHHHHHHHHHH
Confidence 99999876543111 111222 369999999987653 479999999999999986654322 122222
Q ss_pred EcCCcc---------------------------------hh-hh---h--------------hhccc-------------
Q 026965 143 SLGYPF---------------------------------GM-MA---S--------------ILFGR------------- 158 (230)
Q Consensus 143 ~~~~~~---------------------------------~~-~~---~--------------~~~~~------------- 158 (230)
++++.. .. .. . .+.+.
T Consensus 192 ~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~ 271 (395)
T PLN02872 192 LLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYL 271 (395)
T ss_pred HhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHH
Confidence 221110 00 00 0 00000
Q ss_pred -------------------------------------------ccccccCC--CCCEEEEecCCCcccCHHHHHHHHHhc
Q 026965 159 -------------------------------------------HHKAILKS--PKPKLFVMGTRDGFTSVKQLQNKLSSA 193 (230)
Q Consensus 159 -------------------------------------------~~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~ 193 (230)
..-.+.++ ++|+++++|++|.+++++.++.+.+++
T Consensus 272 ~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~L 351 (395)
T PLN02872 272 EYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAEL 351 (395)
T ss_pred hcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHC
Confidence 00012244 579999999999999999988777777
Q ss_pred cCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 194 AGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 194 ~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
....+++.+++.+|. ++-..+..+++.+.|.+|+++
T Consensus 352 p~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 352 PSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred CCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 554688899999997 432222234888999999875
No 58
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=9e-22 Score=153.16 Aligned_cols=199 Identities=17% Similarity=0.160 Sum_probs=132.7
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-------------hhHHHH---HHHHhCCCeEEEEe
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-------------LLKGIA---SGLANKGFKAVTFD 78 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d 78 (230)
+|.+++|..++..+. .. .|+||++||++ ++.. .|..+. ..+...+|.|+++|
T Consensus 31 ~~~~~~y~~~G~~~~------~~---~p~vvl~HG~~---~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D 98 (379)
T PRK00175 31 PPVELAYETYGTLNA------DR---SNAVLICHALT---GDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSN 98 (379)
T ss_pred CCceEEEEeccccCC------CC---CCEEEEeCCcC---CchhhcccccccCCCCcchhhccCCCCccCccceEEEecc
Confidence 456788888875321 01 68899999984 4443 255554 23434579999999
Q ss_pred eccc-ccCCCCCCC-------C----CcccHHHHHHHHHHHHhhCCCCc-EEEEEecchHHHHHHhhhcc-cceEEEEEc
Q 026965 79 MRGV-GRSTGKASL-------T----GFAEVEDVIAVCKWVSENLPTNR-ILLVGSSAGAPIAGSAVDEI-EQVVGYVSL 144 (230)
Q Consensus 79 ~~g~-g~s~~~~~~-------~----~~~~~~d~~~~~~~l~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~ 144 (230)
++|+ |.|+.+... . ....++++.+.+..+.+.++.++ ++++||||||.+++.++..+ .++.+++++
T Consensus 99 l~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~ 178 (379)
T PRK00175 99 VLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVI 178 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEE
Confidence 9983 544332110 0 01235677777777777888888 58999999999999777654 567777776
Q ss_pred CCcchhhh----------hh------------------------------------------hcc---------------
Q 026965 145 GYPFGMMA----------SI------------------------------------------LFG--------------- 157 (230)
Q Consensus 145 ~~~~~~~~----------~~------------------------------------------~~~--------------- 157 (230)
+....... .. .+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~ 258 (379)
T PRK00175 179 ASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVE 258 (379)
T ss_pred CCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCcc
Confidence 54321000 00 000
Q ss_pred -----------------------------------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCc
Q 026965 158 -----------------------------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGR 196 (230)
Q Consensus 158 -----------------------------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~ 196 (230)
.....+.++++|+|+|+|++|.++|++.++...+.. ++
T Consensus 259 ~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i-~~ 337 (379)
T PRK00175 259 FQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL-LA 337 (379)
T ss_pred chHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH-Hh
Confidence 001123467899999999999999998877544433 33
Q ss_pred ----eEEEEec-CCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 197 ----VETHLIE-GASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 197 ----~~~~~~~-~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+++++++ ++||. ++++|+ ++.+.|.+||++
T Consensus 338 a~~~~~l~~i~~~~GH~~~le~p~---~~~~~L~~FL~~ 373 (379)
T PRK00175 338 AGADVSYAEIDSPYGHDAFLLDDP---RYGRLVRAFLER 373 (379)
T ss_pred cCCCeEEEEeCCCCCchhHhcCHH---HHHHHHHHHHHh
Confidence 3777775 89999 888887 899999999975
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=1.6e-21 Score=137.27 Aligned_cols=159 Identities=16% Similarity=0.164 Sum_probs=112.0
Q ss_pred eeEEEECCCCCCCCCchhhH--HHHHHHHhC--CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEE
Q 026965 42 LAIVLVHPYSILGGCQGLLK--GIASGLANK--GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~--~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~ 117 (230)
|+||++||+ +++...|. .+...+.+. +|.++++|+||++ +++.+.+..+.++++.++++
T Consensus 2 p~illlHGf---~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~ 64 (190)
T PRK11071 2 STLLYLHGF---NSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLG 64 (190)
T ss_pred CeEEEECCC---CCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeE
Confidence 579999998 56666565 345666553 6999999999874 34555566666777788999
Q ss_pred EEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhh----------------hcc-c--------ccccccCCCCCEEE
Q 026965 118 LVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI----------------LFG-R--------HHKAILKSPKPKLF 172 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-~--------~~~~~~~~~~p~l~ 172 (230)
++|||+||.+++.++...+. .+++++++....... ... . ....+ ....|+++
T Consensus 65 lvG~S~Gg~~a~~~a~~~~~--~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i-~~~~~v~i 141 (190)
T PRK11071 65 LVGSSLGGYYATWLSQCFML--PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPL-ESPDLIWL 141 (190)
T ss_pred EEEECHHHHHHHHHHHHcCC--CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccC-CChhhEEE
Confidence 99999999999988887663 345665554421100 000 0 00111 25677899
Q ss_pred EecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHh
Q 026965 173 VMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 173 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~ 228 (230)
+||++|+++|++.+.+.+++ ++.++++|++|.+... ++..+.+.+|++
T Consensus 142 ihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f~~~----~~~~~~i~~fl~ 189 (190)
T PRK11071 142 LQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAFVGF----ERYFNQIVDFLG 189 (190)
T ss_pred EEeCCCCcCCHHHHHHHHHh----cceEEECCCCcchhhH----HHhHHHHHHHhc
Confidence 99999999999999977763 4677889999996322 378888888875
No 60
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.88 E-value=8.8e-21 Score=142.82 Aligned_cols=210 Identities=19% Similarity=0.191 Sum_probs=136.4
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
.....++.+.+.+|.+++++++.|++. .++.|+||.+||++ +....+... ..++..||.++.+|.||.
T Consensus 53 ~~~vy~v~f~s~~g~~V~g~l~~P~~~--------~~~~Pavv~~hGyg---~~~~~~~~~-~~~a~~G~~vl~~d~rGq 120 (320)
T PF05448_consen 53 GVEVYDVSFESFDGSRVYGWLYRPKNA--------KGKLPAVVQFHGYG---GRSGDPFDL-LPWAAAGYAVLAMDVRGQ 120 (320)
T ss_dssp SEEEEEEEEEEGGGEEEEEEEEEES-S--------SSSEEEEEEE--TT-----GGGHHHH-HHHHHTT-EEEEE--TTT
T ss_pred CEEEEEEEEEccCCCEEEEEEEecCCC--------CCCcCEEEEecCCC---CCCCCcccc-cccccCCeEEEEecCCCC
Confidence 345677889988999999999999843 23489999999984 444444443 347788999999999999
Q ss_pred ccCCCCCC--------------CCC-cc------cHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceE
Q 026965 83 GRSTGKAS--------------LTG-FA------EVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVV 139 (230)
Q Consensus 83 g~s~~~~~--------------~~~-~~------~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~ 139 (230)
|....... ... .. .+.|+..+++++.+. ++.++|++.|.|+||.+++.++...++++
T Consensus 121 g~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~ 200 (320)
T PF05448_consen 121 GGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVK 200 (320)
T ss_dssp SSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-S
T ss_pred CCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCcccc
Confidence 83321110 000 00 157888888888875 56789999999999999999998889998
Q ss_pred EEEEcCCcchhhhhhhc---------------c---c----------------ccccccCCCCCEEEEecCCCcccCHHH
Q 026965 140 GYVSLGYPFGMMASILF---------------G---R----------------HHKAILKSPKPKLFVMGTRDGFTSVKQ 185 (230)
Q Consensus 140 ~~~~~~~~~~~~~~~~~---------------~---~----------------~~~~~~~~~~p~l~i~g~~D~~~~~~~ 185 (230)
+++...+.+......+. . . ......++++|+++..|-.|++|||..
T Consensus 201 ~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t 280 (320)
T PF05448_consen 201 AAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPST 280 (320)
T ss_dssp EEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHH
T ss_pred EEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchh
Confidence 88876544333221110 0 0 001234689999999999999999999
Q ss_pred HHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 186 LQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.-..++++..++++.++|..+|.... + ...+...+||.+
T Consensus 281 ~fA~yN~i~~~K~l~vyp~~~He~~~--~---~~~~~~~~~l~~ 319 (320)
T PF05448_consen 281 QFAAYNAIPGPKELVVYPEYGHEYGP--E---FQEDKQLNFLKE 319 (320)
T ss_dssp HHHHHCC--SSEEEEEETT--SSTTH--H---HHHHHHHHHHHH
T ss_pred HHHHHhccCCCeeEEeccCcCCCchh--h---HHHHHHHHHHhc
Confidence 88888888888999999999997322 1 214555566654
No 61
>PLN00021 chlorophyllase
Probab=99.88 E-value=1.7e-20 Score=141.16 Aligned_cols=178 Identities=15% Similarity=0.179 Sum_probs=123.7
Q ss_pred ceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCccc
Q 026965 17 VKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAE 96 (230)
Q Consensus 17 ~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 96 (230)
..+.+.++.|... .. .|+||++||+ +.....|..+++.|+++||.|+++|+++++... ....
T Consensus 37 ~~~p~~v~~P~~~------g~---~PvVv~lHG~---~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~------~~~~ 98 (313)
T PLN00021 37 PPKPLLVATPSEA------GT---YPVLLFLHGY---LLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPD------GTDE 98 (313)
T ss_pred CCceEEEEeCCCC------CC---CCEEEEECCC---CCCcccHHHHHHHHHhCCCEEEEecCCCcCCCC------chhh
Confidence 5688888988654 22 7999999998 466778999999999999999999998864321 1122
Q ss_pred HHHHHHHHHHHHhh----------CCCCcEEEEEecchHHHHHHhhhccc------ceEEEEEcCCcchhhhh-----hh
Q 026965 97 VEDVIAVCKWVSEN----------LPTNRILLVGSSAGAPIAGSAVDEIE------QVVGYVSLGYPFGMMAS-----IL 155 (230)
Q Consensus 97 ~~d~~~~~~~l~~~----------~~~~~i~l~G~S~Gg~~a~~~~~~~~------~~~~~~~~~~~~~~~~~-----~~ 155 (230)
+++..++++|+.+. .+.++++++|||+||.+++.++...+ ++.+++.+.+....... ..
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~i 178 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPV 178 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcc
Confidence 46666677776642 34578999999999999998886543 46777766543322110 11
Q ss_pred cccccccccCCCCCEEEEecCCCc-----ccC----HHH-HHHHHHhccCceEEEEecCCCcc-cccCh
Q 026965 156 FGRHHKAILKSPKPKLFVMGTRDG-----FTS----VKQ-LQNKLSSAAGRVETHLIEGASHF-QMEGP 213 (230)
Q Consensus 156 ~~~~~~~~~~~~~p~l~i~g~~D~-----~~~----~~~-~~~~~~~~~~~~~~~~~~~~~H~-~~~~~ 213 (230)
. .......++.+|++++.+..|. .+| ... -.+++.++.+++...+++++||. ++++.
T Consensus 179 l-~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 179 L-TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred c-ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 1 1112233478999999999763 222 322 25588888888999999999999 65544
No 62
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.87 E-value=1e-21 Score=141.57 Aligned_cols=169 Identities=22% Similarity=0.251 Sum_probs=113.9
Q ss_pred hHHHHHHHHhCCCeEEEEeecccccCCCC-----CCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhh
Q 026965 60 LKGIASGLANKGFKAVTFDMRGVGRSTGK-----ASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 60 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-----~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
|....+.|+++||.|+.+|+||.+..... ........++|+.++++++.++ ++.++|.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44678899999999999999997643321 1222233479999999999877 5678999999999999999888
Q ss_pred h-cccceEEEEEcCCcchhh---------hh--hh-cc------------cccccccC--CCCCEEEEecCCCcccCHHH
Q 026965 133 D-EIEQVVGYVSLGYPFGMM---------AS--IL-FG------------RHHKAILK--SPKPKLFVMGTRDGFTSVKQ 185 (230)
Q Consensus 133 ~-~~~~~~~~~~~~~~~~~~---------~~--~~-~~------------~~~~~~~~--~~~p~l~i~g~~D~~~~~~~ 185 (230)
. .+..+++++...+..... .. .. .. .....+.+ +++|+|++||++|..||+++
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~ 162 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQ 162 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHH
T ss_pred cccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHH
Confidence 7 445556666554332211 00 00 00 01123344 78999999999999999998
Q ss_pred HHHHHHhc---cCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 186 LQNKLSSA---AGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 186 ~~~~~~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.++++++ ..+++++++|+++|.+. .++...+..+.+.+|+++
T Consensus 163 s~~~~~~L~~~g~~~~~~~~p~~gH~~~-~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 163 SLRLYNALRKAGKPVELLIFPGEGHGFG-NPENRRDWYERILDFFDK 208 (213)
T ss_dssp HHHHHHHHHHTTSSEEEEEETT-SSSTT-SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCcCCCCCC-CchhHHHHHHHHHHHHHH
Confidence 87665544 45699999999999643 333334666777777754
No 63
>PLN02442 S-formylglutathione hydrolase
Probab=99.87 E-value=5e-20 Score=137.77 Aligned_cols=195 Identities=15% Similarity=0.125 Sum_probs=121.4
Q ss_pred eeeEEeec-CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh---HHHHHHHHhCCCeEEEEeecc
Q 026965 6 VESCAVET-TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL---KGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 6 ~~~~~~~~-~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~g 81 (230)
.+...+.+ .-+..+.|.+|.|+.. +..+.|+|+++||++ ++...| ..+.+.+...|+.|+.||..+
T Consensus 18 ~~~~~~~s~~l~~~~~~~vy~P~~~-------~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~ 87 (283)
T PLN02442 18 NRRYKHFSSTLGCSMTFSVYFPPAS-------DSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSP 87 (283)
T ss_pred EEEEEEeccccCCceEEEEEcCCcc-------cCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCC
Confidence 34444443 3567899999988732 223489999999984 444444 334567777899999999876
Q ss_pred cccC-----CC------C-----CCCCC---cc----cHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccc-
Q 026965 82 VGRS-----TG------K-----ASLTG---FA----EVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQ- 137 (230)
Q Consensus 82 ~g~s-----~~------~-----~~~~~---~~----~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~- 137 (230)
+|.. .. . ..... .. ..+++...++.....++.++++++||||||++++.++.++++
T Consensus 88 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~ 167 (283)
T PLN02442 88 RGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDK 167 (283)
T ss_pred CCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchh
Confidence 6521 00 0 00000 00 134444455444444678899999999999999988776554
Q ss_pred eEEEEEcCCcchhhh--------hhhccc---------c---cccccCCCCCEEEEecCCCcccCHH----HHHHHHHhc
Q 026965 138 VVGYVSLGYPFGMMA--------SILFGR---------H---HKAILKSPKPKLFVMGTRDGFTSVK----QLQNKLSSA 193 (230)
Q Consensus 138 ~~~~~~~~~~~~~~~--------~~~~~~---------~---~~~~~~~~~p~l~i~g~~D~~~~~~----~~~~~~~~~ 193 (230)
+.+++.+++...... ...+.. . ...+...++|+++++|++|++++.. ...+.+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~ 247 (283)
T PLN02442 168 YKSVSAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEA 247 (283)
T ss_pred EEEEEEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHc
Confidence 455555544332110 000000 0 0112346789999999999998852 334456666
Q ss_pred cCceEEEEecCCCcccc
Q 026965 194 AGRVETHLIEGASHFQM 210 (230)
Q Consensus 194 ~~~~~~~~~~~~~H~~~ 210 (230)
..+++++++||.+|.+.
T Consensus 248 g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 248 GAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCeEEEEeCCCCccHH
Confidence 67799999999999854
No 64
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=6.9e-21 Score=169.55 Aligned_cols=181 Identities=19% Similarity=0.254 Sum_probs=128.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCC-----CCcccHHHHHHHHHHHHhhCCCCc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASL-----TGFAEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~~ 115 (230)
.++|||+||+ +++...|..+...|.+. |+|+++|+||||.|...... .....++++.+.+..+.++++.++
T Consensus 1371 ~~~vVllHG~---~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1371 GSVVLFLHGF---LGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCeEEEECCC---CCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 6789999998 57777899999999875 99999999999998754320 111225666666655566777889
Q ss_pred EEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh---------------------------hhhhcc----------
Q 026965 116 ILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM---------------------------ASILFG---------- 157 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~---------- 157 (230)
++++||||||.+++.++.++ ..+.+++++++..... ...++.
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1526 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNH 1526 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccC
Confidence 99999999999999877655 5677777664321100 000000
Q ss_pred --------------------------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccC----------
Q 026965 158 --------------------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAG---------- 195 (230)
Q Consensus 158 --------------------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---------- 195 (230)
.....+.++++|+|+++|++|..++ +.+.+..+....
T Consensus 1527 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~ 1605 (1655)
T PLN02980 1527 PHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGK 1605 (1655)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccc
Confidence 0012245678999999999999875 444433333221
Q ss_pred -ceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 196 -RVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 196 -~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+++++++++||. ++++|+ ++.+.|.+||++
T Consensus 1606 ~~a~lvvI~~aGH~~~lE~Pe---~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1606 EIIEIVEIPNCGHAVHLENPL---PVIRALRKFLTR 1638 (1655)
T ss_pred cceEEEEECCCCCchHHHCHH---HHHHHHHHHHHh
Confidence 2589999999999 788887 899999999975
No 65
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.87 E-value=1.7e-20 Score=128.18 Aligned_cols=192 Identities=19% Similarity=0.300 Sum_probs=135.9
Q ss_pred eeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCC--chhhHHHHHHHHhCCCeEEEEeecccc
Q 026965 6 VESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGC--QGLLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 6 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
.+.+.++...+.++...+....+ ..++|++||+ .++ ...+..++..+.+.|+.++.+|++|.|
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~tgs------------~e~vvlcHGf---rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnG 74 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHETGS------------TEIVVLCHGF---RSHKNAIIMKNVAKALEKEGISAFRFDFSGNG 74 (269)
T ss_pred eeEEEeccCCCchhhcceeccCC------------ceEEEEeecc---ccccchHHHHHHHHHHHhcCceEEEEEecCCC
Confidence 44556665666666654333322 7789999998 333 334667899999999999999999999
Q ss_pred cCCCCCCCCC-cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhh--ccc--
Q 026965 84 RSTGKASLTG-FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASIL--FGR-- 158 (230)
Q Consensus 84 ~s~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-- 158 (230)
+|++....-. ..+++|+..+++++.+. ...--+++|||-||.+++.++.+...+..++.++..+....... ..+
T Consensus 75 eS~gsf~~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~ 153 (269)
T KOG4667|consen 75 ESEGSFYYGNYNTEADDLHSVIQYFSNS-NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDY 153 (269)
T ss_pred CcCCccccCcccchHHHHHHHHHHhccC-ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccH
Confidence 9998765433 33479999999888652 22234689999999999999988877777777765543322110 000
Q ss_pred -----------------------------------ccccc--cCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEE
Q 026965 159 -----------------------------------HHKAI--LKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHL 201 (230)
Q Consensus 159 -----------------------------------~~~~~--~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 201 (230)
..+.. -..+||+|-+||..|.+||.+.+.+ +.+..++.++.+
T Consensus 154 l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~i 232 (269)
T KOG4667|consen 154 LERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEI 232 (269)
T ss_pred HHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEE
Confidence 00001 1347999999999999999999985 555667799999
Q ss_pred ecCCCcccccChh
Q 026965 202 IEGASHFQMEGPA 214 (230)
Q Consensus 202 ~~~~~H~~~~~~~ 214 (230)
++|++|.+.....
T Consensus 233 IEgADHnyt~~q~ 245 (269)
T KOG4667|consen 233 IEGADHNYTGHQS 245 (269)
T ss_pred ecCCCcCccchhh
Confidence 9999999655444
No 66
>PRK10162 acetyl esterase; Provisional
Probab=99.87 E-value=8.2e-20 Score=138.82 Aligned_cols=208 Identities=18% Similarity=0.234 Sum_probs=139.8
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHh-CCCeEEEEeecccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLAN-KGFKAVTFDMRGVG 83 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g 83 (230)
..+++.+...+| .+..++|.|... . .|+||++||++|..++...+..+.+.|++ .|+.|+++|||...
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~-------~---~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlap 124 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPD-------S---QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSP 124 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCC-------C---CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCC
Confidence 456677877676 589999998643 1 68999999998777777788888888887 49999999999643
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHHhh---C--CCCcEEEEEecchHHHHHHhhhcc-------cceEEEEEcCCcchhh
Q 026965 84 RSTGKASLTGFAEVEDVIAVCKWVSEN---L--PTNRILLVGSSAGAPIAGSAVDEI-------EQVVGYVSLGYPFGMM 151 (230)
Q Consensus 84 ~s~~~~~~~~~~~~~d~~~~~~~l~~~---~--~~~~i~l~G~S~Gg~~a~~~~~~~-------~~~~~~~~~~~~~~~~ 151 (230)
+.. ....++|+.++++|+.+. + +.++++++|+|+||.+++.++... +.+.+.+++.+.....
T Consensus 125 e~~------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 125 EAR------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred CCC------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 221 222368888888888653 3 567999999999999999776431 4566666664432210
Q ss_pred h--hh---------h------------ccc---cc--------ccccCCCCCEEEEecCCCcccCHH-HHHHHHHhccCc
Q 026965 152 A--SI---------L------------FGR---HH--------KAILKSPKPKLFVMGTRDGFTSVK-QLQNKLSSAAGR 196 (230)
Q Consensus 152 ~--~~---------~------------~~~---~~--------~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~ 196 (230)
. .. + ... .. ..+.+.-.|+++++|+.|++.+.. ...+.+++.+.+
T Consensus 199 ~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~ 278 (318)
T PRK10162 199 DSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQP 278 (318)
T ss_pred CChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCC
Confidence 0 00 0 000 00 001122369999999999998632 233355666677
Q ss_pred eEEEEecCCCcccccCh---hhHHHHHHHHHHHHhh
Q 026965 197 VETHLIEGASHFQMEGP---AYDAQMVNLILDFIAS 229 (230)
Q Consensus 197 ~~~~~~~~~~H~~~~~~---~~~~~~~~~i~~fl~~ 229 (230)
+++++++|..|.+.... +..++.++.+.+||++
T Consensus 279 v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 279 CEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred EEEEEECCCceehhhccCchHHHHHHHHHHHHHHHH
Confidence 99999999999954221 2234566667777754
No 67
>PRK10115 protease 2; Provisional
Probab=99.87 E-value=3.7e-20 Score=152.94 Aligned_cols=200 Identities=16% Similarity=0.153 Sum_probs=140.9
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
.+..+.+++++.||.+|.+++..+++. ...++.|+||++||+.+ ......|......|+++||.|+.++.||.
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~------~~~~~~P~ll~~hGg~~-~~~~p~f~~~~~~l~~rG~~v~~~n~RGs 485 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKH------FRKGHNPLLVYGYGSYG-ASIDADFSFSRLSLLDRGFVYAIVHVRGG 485 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCC------CCCCCCCEEEEEECCCC-CCCCCCccHHHHHHHHCCcEEEEEEcCCC
Confidence 356788899999999999855543332 11234799999999863 22334566677889999999999999986
Q ss_pred ccCCCCCC-----CCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhh
Q 026965 83 GRSTGKAS-----LTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASIL 155 (230)
Q Consensus 83 g~s~~~~~-----~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
|.-..... .......+|+.++++++.++ .+.+++.+.|.|.||+++..++.+.|++.++++...|+..+...+
T Consensus 486 ~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~ 565 (686)
T PRK10115 486 GELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTM 565 (686)
T ss_pred CccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhc
Confidence 54432111 11223479999999999876 567899999999999999988887666666655544443322211
Q ss_pred c--------------c--------------cccccccCCCCC-EEEEecCCCcccCHHHHHHHHHhc---cCceEEEEe-
Q 026965 156 F--------------G--------------RHHKAILKSPKP-KLFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLI- 202 (230)
Q Consensus 156 ~--------------~--------------~~~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~- 202 (230)
. + .....+.+++.| +|+++|.+|..||+.++.++..++ ..+.+.+++
T Consensus 566 ~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~ 645 (686)
T PRK10115 566 LDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLC 645 (686)
T ss_pred ccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEE
Confidence 0 0 112334566789 567799999999999988766655 345677777
Q ss_pred --cCCCccc
Q 026965 203 --EGASHFQ 209 (230)
Q Consensus 203 --~~~~H~~ 209 (230)
+++||..
T Consensus 646 ~~~~~GHg~ 654 (686)
T PRK10115 646 TDMDSGHGG 654 (686)
T ss_pred ecCCCCCCC
Confidence 8999983
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.87 E-value=1.5e-20 Score=145.06 Aligned_cols=187 Identities=10% Similarity=0.083 Sum_probs=131.6
Q ss_pred ceeEEEECCCCCCC--CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEE
Q 026965 41 SLAIVLVHPYSILG--GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILL 118 (230)
Q Consensus 41 ~~~vi~~hG~~~~~--~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 118 (230)
.++||++||....+ .+...+..+++.|+++||+|+++|++|+|.+........+. .+++.++++++.+..+.+++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~-~~~~~~~v~~l~~~~~~~~i~l 140 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYI-NGYIDKCVDYICRTSKLDQISL 140 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHH-HHHHHHHHHHHHHHhCCCcccE
Confidence 45699999862100 11122468999999999999999999998765433211111 2457788999988888899999
Q ss_pred EEecchHHHHHHhhhcc-cceEEEEEcCCcchhhhh----------------------------------------hh--
Q 026965 119 VGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMAS----------------------------------------IL-- 155 (230)
Q Consensus 119 ~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~~----------------------------------------~~-- 155 (230)
+||||||.+++.++... .++.+++++++|...... .+
T Consensus 141 vGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~ 220 (350)
T TIGR01836 141 LGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQK 220 (350)
T ss_pred EEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHH
Confidence 99999999999776554 467778877665431000 00
Q ss_pred -----------------------ccc-------------------------------ccccccCCCCCEEEEecCCCccc
Q 026965 156 -----------------------FGR-------------------------------HHKAILKSPKPKLFVMGTRDGFT 181 (230)
Q Consensus 156 -----------------------~~~-------------------------------~~~~~~~~~~p~l~i~g~~D~~~ 181 (230)
... ....+.++++|+++++|++|.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~ 300 (350)
T TIGR01836 221 YVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLV 300 (350)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcC
Confidence 000 00013357899999999999999
Q ss_pred CHHHHHHHHHhcc-CceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 182 SVKQLQNKLSSAA-GRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|++.++...+... .++++++++ +||. ++..+...++++..|.+||++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 301 PPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9998886666654 357788888 5888 777666667999999999975
No 69
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.87 E-value=1.1e-19 Score=131.70 Aligned_cols=203 Identities=19% Similarity=0.235 Sum_probs=149.1
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc-ccC
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV-GRS 85 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s 85 (230)
+.+.+.+.+ .++..++..|.... + .|.||++|+. .+-......+++.|++.||.+++||+-+. |.+
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~------~---~P~VIv~hei---~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~ 69 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAG------G---FPGVIVLHEI---FGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDP 69 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCC------C---CCEEEEEecc---cCCchHHHHHHHHHHhCCcEEEechhhccCCCC
Confidence 456777656 78999999998762 1 4899999998 67777899999999999999999998653 222
Q ss_pred CCCCC----C-------C-CcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhh
Q 026965 86 TGKAS----L-------T-GFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMM 151 (230)
Q Consensus 86 ~~~~~----~-------~-~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
..... . . ......|+.+.+++|..+ .+.++|.++|+||||.+++.++...+++++.+.+-+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~- 148 (236)
T COG0412 70 TDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA- 148 (236)
T ss_pred CcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC-
Confidence 21110 0 0 012278899999999765 3567899999999999999999988888888876433221
Q ss_pred hhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc---cCceEEEEecCCCcccccC---------hhhHHHH
Q 026965 152 ASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLIEGASHFQMEG---------PAYDAQM 219 (230)
Q Consensus 152 ~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~---------~~~~~~~ 219 (230)
.......++++|+|+.+|+.|..+|.+....+.+++ ..++++.+++++.|.+... +...+..
T Consensus 149 ------~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a 222 (236)
T COG0412 149 ------DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDA 222 (236)
T ss_pred ------CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHH
Confidence 111225578999999999999999987655433333 3368899999999996532 2345677
Q ss_pred HHHHHHHHhh
Q 026965 220 VNLILDFIAS 229 (230)
Q Consensus 220 ~~~i~~fl~~ 229 (230)
++.+.+|+++
T Consensus 223 ~~~~~~ff~~ 232 (236)
T COG0412 223 WQRVLAFFKR 232 (236)
T ss_pred HHHHHHHHHH
Confidence 7778888765
No 70
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.85 E-value=7.1e-21 Score=128.86 Aligned_cols=196 Identities=17% Similarity=0.178 Sum_probs=143.8
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLT 92 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~ 92 (230)
.+|.+|.|..++.. ...|+++.|. .++....|.+....+-+. .+.++++|.||+|.|.++....
T Consensus 28 vng~ql~y~~~G~G-------------~~~iLlipGa--lGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf 92 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHG-------------PNYILLIPGA--LGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKF 92 (277)
T ss_pred ecCceeeeeecCCC-------------CceeEecccc--cccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccc
Confidence 47888999888764 4569999998 577788888777666543 4899999999999999887766
Q ss_pred Cccc-HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchh--hhh----------hhccc
Q 026965 93 GFAE-VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGM--MAS----------ILFGR 158 (230)
Q Consensus 93 ~~~~-~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~--~~~----------~~~~~ 158 (230)
..+. .+|...+++.. +.++.+++.++|+|-||..++.+|.+. +.+...++.+...-. ... .|..+
T Consensus 93 ~~~ff~~Da~~avdLM-~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r 171 (277)
T KOG2984|consen 93 EVQFFMKDAEYAVDLM-EALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSAR 171 (277)
T ss_pred hHHHHHHhHHHHHHHH-HHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhh
Confidence 5543 46666666554 456889999999999999999777655 455555555422100 000 00000
Q ss_pred ------------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEe
Q 026965 159 ------------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLI 202 (230)
Q Consensus 159 ------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 202 (230)
-...+.++++|+|++||+.|++++..++- ++....+.+++.++
T Consensus 172 ~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~-fi~~~~~~a~~~~~ 250 (277)
T KOG2984|consen 172 GRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVC-FIPVLKSLAKVEIH 250 (277)
T ss_pred hcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCcc-chhhhcccceEEEc
Confidence 01235678999999999999999987766 77777788999999
Q ss_pred cCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 203 EGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 203 ~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|.++|+ .+..++ ++.+.+.+||++
T Consensus 251 peGkHn~hLrya~---eFnklv~dFl~~ 275 (277)
T KOG2984|consen 251 PEGKHNFHLRYAK---EFNKLVLDFLKS 275 (277)
T ss_pred cCCCcceeeechH---HHHHHHHHHHhc
Confidence 999999 555454 899999999975
No 71
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=1.7e-19 Score=131.13 Aligned_cols=173 Identities=17% Similarity=0.165 Sum_probs=110.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCC--CCC------CCccc-------HHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGK--ASL------TGFAE-------VEDVIAVCK 105 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~--~~~------~~~~~-------~~d~~~~~~ 105 (230)
.|+||++||+ +++...+..+++.|.+.++.+..++.+|....... ..+ ..... .+.+.+.++
T Consensus 16 ~~~vIlLHG~---G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 16 QQLLLLFHGV---GDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CcEEEEEeCC---CCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 7899999998 68888899999999887655555555554322100 000 00010 223334445
Q ss_pred HHHhhC--CCCcEEEEEecchHHHHHHhhhcccceEE-EEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccC
Q 026965 106 WVSENL--PTNRILLVGSSAGAPIAGSAVDEIEQVVG-YVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTS 182 (230)
Q Consensus 106 ~l~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~ 182 (230)
++.++. +.++++++|||+||.+++.++...+++.+ ++.++..+... ......+.|++++||++|+++|
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------~~~~~~~~pvli~hG~~D~vvp 163 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------PETAPTATTIHLIHGGEDPVID 163 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------cccccCCCcEEEEecCCCCccC
Confidence 554443 45789999999999999988766666544 45554332110 1112357899999999999999
Q ss_pred HHHHHHHHH---hccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 183 VKQLQNKLS---SAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 183 ~~~~~~~~~---~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
++.+++..+ +...+++++++++++|.+. ++..+.+.+++.+++
T Consensus 164 ~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l~~~l 209 (232)
T PRK11460 164 VAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHHHHHc
Confidence 888765444 3445689999999999852 222234444444444
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.84 E-value=3.9e-19 Score=135.25 Aligned_cols=205 Identities=19% Similarity=0.246 Sum_probs=128.9
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH-HHHHHHhCCCeEEEEeecc
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG-IASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-~~~~l~~~g~~v~~~d~~g 81 (230)
+...+++.++- +|..|.+++..|+.. ++ .|+||++-|. .+....+.. +.++++++|++++++|.||
T Consensus 162 ~~~i~~v~iP~-eg~~I~g~LhlP~~~------~p---~P~VIv~gGl---Ds~qeD~~~l~~~~l~~rGiA~LtvDmPG 228 (411)
T PF06500_consen 162 DYPIEEVEIPF-EGKTIPGYLHLPSGE------KP---YPTVIVCGGL---DSLQEDLYRLFRDYLAPRGIAMLTVDMPG 228 (411)
T ss_dssp SSEEEEEEEEE-TTCEEEEEEEESSSS------S----EEEEEEE--T---TS-GGGGHHHHHCCCHHCT-EEEEE--TT
T ss_pred CCCcEEEEEee-CCcEEEEEEEcCCCC------CC---CCEEEEeCCc---chhHHHHHHHHHHHHHhCCCEEEEEccCC
Confidence 45678888885 457899999888754 22 7888888775 555555544 4567999999999999999
Q ss_pred cccCCCCCCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhh-cccceEEEEEcCCcchhhhh--hhc
Q 026965 82 VGRSTGKASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVD-EIEQVVGYVSLGYPFGMMAS--ILF 156 (230)
Q Consensus 82 ~g~s~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 156 (230)
.|.|...+...... .-...+++++.+. +|..+|.++|.|+||++|..+|. ..+++++++.++++...... ...
T Consensus 229 ~G~s~~~~l~~D~~--~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~ 306 (411)
T PF06500_consen 229 QGESPKWPLTQDSS--RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQ 306 (411)
T ss_dssp SGGGTTT-S-S-CC--HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHH
T ss_pred CcccccCCCCcCHH--HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHH
Confidence 99986443222222 3456778888764 56789999999999999998875 56899999999877433211 000
Q ss_pred cc--------------------------------ccc-cc--cCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEE
Q 026965 157 GR--------------------------------HHK-AI--LKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHL 201 (230)
Q Consensus 157 ~~--------------------------------~~~-~~--~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 201 (230)
.+ ..+ -+ .+.++|+|.+.+++|+++|.++.+ ++.....+.+...
T Consensus 307 ~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~-lia~~s~~gk~~~ 385 (411)
T PF06500_consen 307 QRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSR-LIAESSTDGKALR 385 (411)
T ss_dssp TTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHH-HHHHTBTT-EEEE
T ss_pred hcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHH-HHHhcCCCCceee
Confidence 00 001 12 356789999999999999999987 5555555566666
Q ss_pred ecCCC-cccccChhhHHHHHHHHHHHHhh
Q 026965 202 IEGAS-HFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 202 ~~~~~-H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
++... |.-+ ++.+..+.+||++
T Consensus 386 ~~~~~~~~gy------~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 386 IPSKPLHMGY------PQALDEIYKWLED 408 (411)
T ss_dssp E-SSSHHHHH------HHHHHHHHHHHHH
T ss_pred cCCCccccch------HHHHHHHHHHHHH
Confidence 66444 5311 2556667777764
No 73
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=2.5e-19 Score=142.52 Aligned_cols=183 Identities=14% Similarity=0.192 Sum_probs=127.7
Q ss_pred eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh-----HHHHHHHHhCCCeEEEEeecccccCCCCCCCC
Q 026965 18 KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL-----KGIASGLANKGFKAVTFDMRGVGRSTGKASLT 92 (230)
Q Consensus 18 ~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 92 (230)
.+..+.|.|.... ...++||++||+ ......+ ..++++|.++||.|+++|++|+|.+.......
T Consensus 173 ~~eLi~Y~P~t~~--------~~~~PlLiVp~~---i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~d 241 (532)
T TIGR01838 173 LFQLIQYEPTTET--------VHKTPLLIVPPW---INKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFD 241 (532)
T ss_pred cEEEEEeCCCCCc--------CCCCcEEEECcc---cccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChh
Confidence 3566667776431 126889999997 3333333 47999999999999999999999876544332
Q ss_pred CcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHH-----Hhhhc-ccceEEEEEcCCcchhhhhh------------
Q 026965 93 GFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAG-----SAVDE-IEQVVGYVSLGYPFGMMASI------------ 154 (230)
Q Consensus 93 ~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~-----~~~~~-~~~~~~~~~~~~~~~~~~~~------------ 154 (230)
.+. .+++.+.++.+++..+.++++++|||+||.++. .++.. ..++.++++++.+..+....
T Consensus 242 dY~-~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~ 320 (532)
T TIGR01838 242 DYI-RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVA 320 (532)
T ss_pred hhH-HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHH
Confidence 221 356888899988888999999999999999863 23333 34688888876554321000
Q ss_pred --------------------------------------hccc--------------------------------------
Q 026965 155 --------------------------------------LFGR-------------------------------------- 158 (230)
Q Consensus 155 --------------------------------------~~~~-------------------------------------- 158 (230)
+..+
T Consensus 321 ~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G 400 (532)
T TIGR01838 321 GIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTG 400 (532)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCC
Confidence 0000
Q ss_pred ------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccCh
Q 026965 159 ------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGP 213 (230)
Q Consensus 159 ------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~ 213 (230)
....+.++++|+++++|++|.++|++.+.... +..++.+.++++++||. .+++|
T Consensus 401 ~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~-~~i~~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 401 GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGA-ALLGGPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHH-HHCCCCEEEEECCCCCchHhhCC
Confidence 00234468999999999999999999888544 44557788889999999 55544
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.84 E-value=3.8e-18 Score=127.41 Aligned_cols=186 Identities=16% Similarity=0.101 Sum_probs=111.8
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH---HHHHHHhCCCeEEEEee--cccccCCCCC
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG---IASGLANKGFKAVTFDM--RGVGRSTGKA 89 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~---~~~~l~~~g~~v~~~d~--~g~g~s~~~~ 89 (230)
.+.++.|.+|.|++.. ..+.|+|+++||+ +++...|.. +...+.+.|+.|++||. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~~~-------~~~~P~vvllHG~---~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~ 92 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAA-------AGPVPVLWYLSGL---TCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDD 92 (275)
T ss_pred cCCceEEEEEcCCCcc-------CCCCCEEEEccCC---CCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcc
Confidence 5677889999997531 1227999999998 455555533 22444456999999998 4544322100
Q ss_pred C------------------CCCcccHHHHHHHH-HHHHhh--CCCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCc
Q 026965 90 S------------------LTGFAEVEDVIAVC-KWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYP 147 (230)
Q Consensus 90 ~------------------~~~~~~~~d~~~~~-~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~ 147 (230)
. .........+.+.+ ..+... ++.++++++||||||++++.++.+.| .+.+++.+++.
T Consensus 93 ~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 93 AWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 0 00111122222222 223332 46679999999999999998877654 45555554433
Q ss_pred chhh--------hhhhccccc---------ccc--cCCCCCEEEEecCCCcccCH-H---HHHHHHHhccCceEEEEecC
Q 026965 148 FGMM--------ASILFGRHH---------KAI--LKSPKPKLFVMGTRDGFTSV-K---QLQNKLSSAAGRVETHLIEG 204 (230)
Q Consensus 148 ~~~~--------~~~~~~~~~---------~~~--~~~~~p~l~i~g~~D~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 204 (230)
.... ....+.... ... .....|+++.+|+.|+.++. . ...+.+++...++++.++||
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g 252 (275)
T TIGR02821 173 VAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAG 252 (275)
T ss_pred cCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCC
Confidence 2111 000011100 000 12457899999999999997 2 34445666667799999999
Q ss_pred CCcccc
Q 026965 205 ASHFQM 210 (230)
Q Consensus 205 ~~H~~~ 210 (230)
.+|.+.
T Consensus 253 ~~H~f~ 258 (275)
T TIGR02821 253 YDHSYY 258 (275)
T ss_pred CCccch
Confidence 999964
No 75
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.83 E-value=4.1e-19 Score=127.72 Aligned_cols=162 Identities=17% Similarity=0.086 Sum_probs=102.6
Q ss_pred EEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhH---HHHHHHHhCCCeEEEEeecccccCCCCCCC------
Q 026965 21 ARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLK---GIASGLANKGFKAVTFDMRGVGRSTGKASL------ 91 (230)
Q Consensus 21 ~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~------ 91 (230)
+++|.|++. +++.|+||++||++ .+...+. .+.+.+.+.||.|++||++|++.+......
T Consensus 1 ~~ly~P~~~--------~~~~P~vv~lHG~~---~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~ 69 (212)
T TIGR01840 1 MYVYVPAGL--------TGPRALVLALHGCG---QTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHR 69 (212)
T ss_pred CEEEcCCCC--------CCCCCEEEEeCCCC---CCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCcccc
Confidence 356777653 12389999999984 4433333 355666667999999999998754321111
Q ss_pred -CCcccHHHHHHHHHHHHhhC--CCCcEEEEEecchHHHHHHhhhcccc-eEEEEEcCCcchhhhh-------h------
Q 026965 92 -TGFAEVEDVIAVCKWVSENL--PTNRILLVGSSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGMMAS-------I------ 154 (230)
Q Consensus 92 -~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~~~~-------~------ 154 (230)
.......++..+++++.+++ +.++++++|||+||.+++.++..+++ +.+++.++.+...... .
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 149 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAAT 149 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCC
Confidence 11123677888888887764 45799999999999999988776554 5555555544311100 0
Q ss_pred ------hcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc
Q 026965 155 ------LFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA 193 (230)
Q Consensus 155 ------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 193 (230)
..............|++++||++|.+||++.+++..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l 194 (212)
T TIGR01840 150 AASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAM 194 (212)
T ss_pred HHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHH
Confidence 000001111223345789999999999998877655544
No 76
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=3.7e-19 Score=130.16 Aligned_cols=197 Identities=19% Similarity=0.265 Sum_probs=140.2
Q ss_pred ceeeEEEEc-cCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCCCc
Q 026965 17 VKLNARVFR-PKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLTGF 94 (230)
Q Consensus 17 ~~l~~~~~~-p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~ 94 (230)
.++.|..+. ..+. ...|+++++||. .++...|..+...|+.. +..++.+|.|.||.|+........
T Consensus 36 ~~l~y~~~~~~~~~---------~~~Pp~i~lHGl---~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~ 103 (315)
T KOG2382|consen 36 VRLAYDSVYSSENL---------ERAPPAIILHGL---LGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYE 103 (315)
T ss_pred cccceeeeeccccc---------CCCCceEEeccc---ccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHH
Confidence 457777663 3222 238999999997 67889999999999875 778999999999999876655554
Q ss_pred ccHHHHHHHHHHHHhhCCCCcEEEEEecchH-HHHHHhhh-cccceEEEEEcCCcchhhh--------------------
Q 026965 95 AEVEDVIAVCKWVSENLPTNRILLVGSSAGA-PIAGSAVD-EIEQVVGYVSLGYPFGMMA-------------------- 152 (230)
Q Consensus 95 ~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg-~~a~~~~~-~~~~~~~~~~~~~~~~~~~-------------------- 152 (230)
...+|+..+++.........++.++|||||| .+++.... .+..+..+++...+.....
T Consensus 104 ~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~ 183 (315)
T KOG2382|consen 104 AMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSI 183 (315)
T ss_pred HHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccc
Confidence 4567888888777655567899999999999 44443333 3444455554422110000
Q ss_pred -----------------------hh---hcc---------------------------cccccc--cCCCCCEEEEecCC
Q 026965 153 -----------------------SI---LFG---------------------------RHHKAI--LKSPKPKLFVMGTR 177 (230)
Q Consensus 153 -----------------------~~---~~~---------------------------~~~~~~--~~~~~p~l~i~g~~ 177 (230)
.+ .+. ..+..+ .....|+++++|.+
T Consensus 184 ~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~ 263 (315)
T KOG2382|consen 184 GVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQ 263 (315)
T ss_pred cccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCC
Confidence 00 000 000111 23578999999999
Q ss_pred CcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 178 DGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 178 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.+++.++-. .+++..+.++++.++++||+ ..++|+ ++++.|.+|+..
T Consensus 264 S~fv~~~~~~-~~~~~fp~~e~~~ld~aGHwVh~E~P~---~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 264 SKFVPDEHYP-RMEKIFPNVEVHELDEAGHWVHLEKPE---EFIESISEFLEE 312 (315)
T ss_pred CCCcChhHHH-HHHHhccchheeecccCCceeecCCHH---HHHHHHHHHhcc
Confidence 9999988766 67788889999999999999 889998 999999999864
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.82 E-value=4.1e-18 Score=122.85 Aligned_cols=176 Identities=20% Similarity=0.215 Sum_probs=96.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHH-HHHhCCCeEEEEeecc------ccc---CCCCCC---CCCccc-------HHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIAS-GLANKGFKAVTFDMRG------VGR---STGKAS---LTGFAE-------VEDV 100 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~g~---s~~~~~---~~~~~~-------~~d~ 100 (230)
.++||++||+ +++...+..+.. .+......++.++-|. .|. +..... ...... .+.+
T Consensus 14 ~~lvi~LHG~---G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 14 KPLVILLHGY---GDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp SEEEEEE--T---TS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred ceEEEEECCC---CCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 8999999998 555555555544 2333457777776542 122 111111 111011 2223
Q ss_pred HHHHHHHHh-hCCCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCC
Q 026965 101 IAVCKWVSE-NLPTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRD 178 (230)
Q Consensus 101 ~~~~~~l~~-~~~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D 178 (230)
.++++...+ .++.++|+++|+|+||.+++.++.+ +..+.+++.+++......... ..... ..++|++++||++|
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~--~~~~~--~~~~pi~~~hG~~D 166 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE--DRPEA--LAKTPILIIHGDED 166 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH--CCHCC--CCTS-EEEEEETT-
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc--ccccc--cCCCcEEEEecCCC
Confidence 333332222 2567899999999999999977764 456778888776544321111 11111 12789999999999
Q ss_pred cccCHHHHHH---HHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 179 GFTSVKQLQN---KLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 179 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+++|.+.+++ .+++...++++..++|.||... .+.++.+.+||++
T Consensus 167 ~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~------~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 167 PVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS------PEELRDLREFLEK 214 (216)
T ss_dssp SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--------HHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC------HHHHHHHHHHHhh
Confidence 9999876553 5556667899999999999742 2556667788765
No 78
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.81 E-value=1.1e-18 Score=123.96 Aligned_cols=101 Identities=26% Similarity=0.297 Sum_probs=78.6
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCCCcc--cHHHHHHHHHHHHhhCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLTGFA--EVEDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~--~~~d~~~~~~~l~~~~~~~~i~ 117 (230)
.|+++++||+ +.+.-.|..+++.+... .++++++|+||||++.-.+...... ...|+.++++.+.... ..+|+
T Consensus 74 gpil~l~HG~---G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~-~~~ii 149 (343)
T KOG2564|consen 74 GPILLLLHGG---GSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGEL-PPQII 149 (343)
T ss_pred ccEEEEeecC---cccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccC-CCceE
Confidence 8999999998 68888899999988764 5678999999999998665443322 2678888777776553 45799
Q ss_pred EEEecchHHHHHHhhh--cccceEEEEEcC
Q 026965 118 LVGSSAGAPIAGSAVD--EIEQVVGYVSLG 145 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~--~~~~~~~~~~~~ 145 (230)
++||||||.++...+. ..|.+.+++.+.
T Consensus 150 lVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 150 LVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred EEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 9999999999996654 346788877764
No 79
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.81 E-value=8.4e-19 Score=127.66 Aligned_cols=148 Identities=27% Similarity=0.423 Sum_probs=110.8
Q ss_pred CeEEEEeecccccCCC--CCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCc-
Q 026965 72 FKAVTFDMRGVGRSTG--KASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYP- 147 (230)
Q Consensus 72 ~~v~~~d~~g~g~s~~--~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~- 147 (230)
|+|+++|+||+|.|++ ....... ..+|+.+.++.+++.++.+++.++||||||.+++.++..+ .++.++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDY-TTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTH-CHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccc-cHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6899999999999994 1222222 2688999999999999999999999999999999777655 458888887775
Q ss_pred -chh------hhh-hhcc--------------------------------------------------------------
Q 026965 148 -FGM------MAS-ILFG-------------------------------------------------------------- 157 (230)
Q Consensus 148 -~~~------~~~-~~~~-------------------------------------------------------------- 157 (230)
... ... ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 100 000 0000
Q ss_pred ------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHH
Q 026965 158 ------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLIL 224 (230)
Q Consensus 158 ------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~ 224 (230)
.....+.++++|+++++|++|.++|++.... +.+..++.++++++++||. +++.++ ++.+.|.
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~~~---~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEGPD---EFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHSHH---HHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcCHH---hhhhhhc
Confidence 0002234689999999999999999999886 7777888999999999999 777776 5555543
No 80
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.80 E-value=1.7e-18 Score=127.14 Aligned_cols=130 Identities=19% Similarity=0.248 Sum_probs=94.7
Q ss_pred eEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCC-CCchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 8 SCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILG-GCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
.+++++..|. +.++++.|.+. ++ .++||++||++... .....|..+++.|+++||.|+.+|+||+|.|.
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~~------~~---~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~ 71 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVAV------GP---RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSA 71 (266)
T ss_pred CEEecCCCCc-EEEEEecCCCC------CC---ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Confidence 4566666664 66777777543 12 68999999984211 12345677889999999999999999999997
Q ss_pred CCCCCCCcc-cHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcc
Q 026965 87 GKASLTGFA-EVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPF 148 (230)
Q Consensus 87 ~~~~~~~~~-~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~ 148 (230)
+........ ..+|+..+++++.+. +.++++++||||||.+++.++.+. ..+.+++++++..
T Consensus 72 g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 72 GDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred CccccCCHHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 654432222 268888888888765 678999999999999999777655 5666788776543
No 81
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=4.8e-18 Score=120.34 Aligned_cols=192 Identities=18% Similarity=0.224 Sum_probs=140.1
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
..-+++++..+|.+|.+|+..|... +++.|+||-.||++ +....|..+.. ++..||.|+.+|.||.|.
T Consensus 55 e~ydvTf~g~~g~rI~gwlvlP~~~--------~~~~P~vV~fhGY~---g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~ 122 (321)
T COG3458 55 EVYDVTFTGYGGARIKGWLVLPRHE--------KGKLPAVVQFHGYG---GRGGEWHDMLH-WAVAGYAVFVMDVRGQGS 122 (321)
T ss_pred EEEEEEEeccCCceEEEEEEeeccc--------CCccceEEEEeecc---CCCCCcccccc-ccccceeEEEEecccCCC
Confidence 3456788888999999999999765 24489999999994 44445544443 455699999999999988
Q ss_pred CCCC----CCC---CCc---------------ccHHHHHHHHHHHHh--hCCCCcEEEEEecchHHHHHHhhhcccceEE
Q 026965 85 STGK----ASL---TGF---------------AEVEDVIAVCKWVSE--NLPTNRILLVGSSAGAPIAGSAVDEIEQVVG 140 (230)
Q Consensus 85 s~~~----~~~---~~~---------------~~~~d~~~~~~~l~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~ 140 (230)
++.. +.. .+. .-..|+..+++.+.+ ..+.+||.+.|.|+||.+++.++...+++++
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~ 202 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKA 202 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhc
Confidence 7421 111 000 015777788877765 3678999999999999999999988888888
Q ss_pred EEEcCCcchhhhhhhc--------------ccc----------------cccccCCCCCEEEEecCCCcccCHHHHHHHH
Q 026965 141 YVSLGYPFGMMASILF--------------GRH----------------HKAILKSPKPKLFVMGTRDGFTSVKQLQNKL 190 (230)
Q Consensus 141 ~~~~~~~~~~~~~~~~--------------~~~----------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 190 (230)
.+..-+-++.....+. .+. .....++++|+|+..|-.|++|||...-..+
T Consensus 203 ~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~y 282 (321)
T COG3458 203 VVADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAY 282 (321)
T ss_pred ccccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHh
Confidence 7765433332222110 000 0123368999999999999999999887788
Q ss_pred HhccCceEEEEecCCCcc
Q 026965 191 SSAAGRVETHLIEGASHF 208 (230)
Q Consensus 191 ~~~~~~~~~~~~~~~~H~ 208 (230)
+++...+++.+++--+|.
T Consensus 283 N~l~~~K~i~iy~~~aHe 300 (321)
T COG3458 283 NALTTSKTIEIYPYFAHE 300 (321)
T ss_pred hcccCCceEEEeeccccc
Confidence 888888899999988897
No 82
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=1.1e-17 Score=129.69 Aligned_cols=202 Identities=15% Similarity=0.147 Sum_probs=134.6
Q ss_pred CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCC----------chhhHHHH---HHHHhCCCeEEEEeeccc
Q 026965 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGC----------QGLLKGIA---SGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 16 g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~----------~~~~~~~~---~~l~~~g~~v~~~d~~g~ 82 (230)
..+|.|..|+..+.. . .++||++|+.+++... ...|..+. +.+....|.|+++|..|.
T Consensus 40 ~~~~~Y~t~G~ln~~------~---~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~ 110 (389)
T PRK06765 40 DVQMGYETYGTLNRA------K---SNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCN 110 (389)
T ss_pred CceEEEEeccccCCC------C---CCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCC
Confidence 467899999886542 2 7899999998521100 11244332 234444699999999987
Q ss_pred ccCCCC-----------CC-------CCCcccHHHHHHHHHHHHhhCCCCcEE-EEEecchHHHHHHhhhcc-cceEEEE
Q 026965 83 GRSTGK-----------AS-------LTGFAEVEDVIAVCKWVSENLPTNRIL-LVGSSAGAPIAGSAVDEI-EQVVGYV 142 (230)
Q Consensus 83 g~s~~~-----------~~-------~~~~~~~~d~~~~~~~l~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~-~~~~~~~ 142 (230)
+.|..+ +. ......++|..+.+..+.++++.+++. ++||||||.+++.++.++ ..+.+++
T Consensus 111 ~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv 190 (389)
T PRK06765 111 VQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMI 190 (389)
T ss_pred CcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 753211 10 011123778777777777888999986 999999999999777654 4567776
Q ss_pred EcCCcchh--h------h----hh------------------------------------h----cccc-----------
Q 026965 143 SLGYPFGM--M------A----SI------------------------------------L----FGRH----------- 159 (230)
Q Consensus 143 ~~~~~~~~--~------~----~~------------------------------------~----~~~~----------- 159 (230)
+++..... . . .. + +.+.
T Consensus 191 ~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~ 270 (389)
T PRK06765 191 GVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKV 270 (389)
T ss_pred EEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccc
Confidence 66321100 0 0 00 0 0000
Q ss_pred ---------------------------------------------cccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc
Q 026965 160 ---------------------------------------------HKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA 194 (230)
Q Consensus 160 ---------------------------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 194 (230)
...+.++++|+|+|+|++|.++|++..+...+...
T Consensus 271 ~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp 350 (389)
T PRK06765 271 STLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQ 350 (389)
T ss_pred cchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 01233579999999999999999988775544442
Q ss_pred ---CceEEEEecC-CCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 195 ---GRVETHLIEG-ASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 195 ---~~~~~~~~~~-~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
++++++++++ +||. ++++++ ++.+.|.+||++
T Consensus 351 ~~~~~a~l~~I~s~~GH~~~le~p~---~~~~~I~~FL~~ 387 (389)
T PRK06765 351 KQGKYAEVYEIESINGHMAGVFDIH---LFEKKIYEFLNR 387 (389)
T ss_pred hcCCCeEEEEECCCCCcchhhcCHH---HHHHHHHHHHcc
Confidence 4789999985 8999 788887 899999999864
No 83
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.78 E-value=2e-16 Score=110.68 Aligned_cols=203 Identities=17% Similarity=0.236 Sum_probs=120.3
Q ss_pred eEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc-ccCC
Q 026965 8 SCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV-GRST 86 (230)
Q Consensus 8 ~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~s~ 86 (230)
+..+...+|..|..|.-.|++.. ....++||+..|+ +.....+..++.+|+..||.|+.+|.-.| |.|+
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~-------~~~~~tiliA~Gf---~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs 73 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNE-------PKRNNTILIAPGF---ARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS 73 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS----------S-EEEEE-TT----GGGGGGHHHHHHHHTTT--EEEE---B------
T ss_pred cceeEcCCCCEEEEeccCCCCCC-------cccCCeEEEecch---hHHHHHHHHHHHHHhhCCeEEEeccccccccCCC
Confidence 44566679999999999998642 2226899999998 68888999999999999999999998766 9999
Q ss_pred CCCCCCCccc-HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhh--hh--------
Q 026965 87 GKASLTGFAE-VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMAS--IL-------- 155 (230)
Q Consensus 87 ~~~~~~~~~~-~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------- 155 (230)
+......... ..++..+++|+. ..+..++.++.-|+.|.+|+..+... ++..++........... ..
T Consensus 74 G~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~ 151 (294)
T PF02273_consen 74 GDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQL 151 (294)
T ss_dssp -------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS
T ss_pred CChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhc
Confidence 8877666533 688999999998 55888999999999999999888765 44444443222211000 00
Q ss_pred -------------------------cc-------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc-CceEEEEe
Q 026965 156 -------------------------FG-------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVETHLI 202 (230)
Q Consensus 156 -------------------------~~-------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 202 (230)
+. .....+.++.+|++.+++++|.+|...+..+.+.... +.+++..+
T Consensus 152 ~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl 231 (294)
T PF02273_consen 152 PIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSL 231 (294)
T ss_dssp -GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEE
T ss_pred chhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEe
Confidence 00 0113355689999999999999999999888877665 46899999
Q ss_pred cCCCcccccChhhHHHHHHH
Q 026965 203 EGASHFQMEGPAYDAQMVNL 222 (230)
Q Consensus 203 ~~~~H~~~~~~~~~~~~~~~ 222 (230)
+|+.|..-+++-..+.+++.
T Consensus 232 ~Gs~HdL~enl~vlrnfy~s 251 (294)
T PF02273_consen 232 PGSSHDLGENLVVLRNFYQS 251 (294)
T ss_dssp TT-SS-TTSSHHHHHHHHHH
T ss_pred cCccchhhhChHHHHHHHHH
Confidence 99999987777544444433
No 84
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.77 E-value=2.3e-17 Score=113.83 Aligned_cols=178 Identities=17% Similarity=0.169 Sum_probs=127.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec-ccccCCC-CCC--------CCCcccHHHHHHHHHHHHhh
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR-GVGRSTG-KAS--------LTGFAEVEDVIAVCKWVSEN 110 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-g~g~s~~-~~~--------~~~~~~~~d~~~~~~~l~~~ 110 (230)
..+||.+--. .+-....-+..+..++..||.|++||+- |--.+.. ... ........++..++++++.+
T Consensus 39 ~~~li~i~Dv--fG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 39 KKVLIVIQDV--FGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred CeEEEEEEee--eccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc
Confidence 4577777765 2444455778899999999999999974 3111111 100 01111268999999999988
Q ss_pred CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHH
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKL 190 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 190 (230)
.+.++|.++|++|||.++..+....+.+.+.+++-+.+.. ...+..+++|++++.|+.|.++|++....+-
T Consensus 117 g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d---------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~e 187 (242)
T KOG3043|consen 117 GDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVD---------SADIANVKAPILFLFAELDEDVPPKDVKAWE 187 (242)
T ss_pred CCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCC---------hhHHhcCCCCEEEEeecccccCCHHHHHHHH
Confidence 7789999999999999999888777778887776544432 3445678899999999999999998766443
Q ss_pred HhccC----ceEEEEecCCCccccc------Chh---hHHHHHHHHHHHHhh
Q 026965 191 SSAAG----RVETHLIEGASHFQME------GPA---YDAQMVNLILDFIAS 229 (230)
Q Consensus 191 ~~~~~----~~~~~~~~~~~H~~~~------~~~---~~~~~~~~i~~fl~~ 229 (230)
+++.. ..++.+++|.+|.++. .|+ +.++..+.+.+|+++
T Consensus 188 e~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 188 EKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred HHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 33322 2479999999999652 233 456777778888875
No 85
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.76 E-value=4.1e-16 Score=102.04 Aligned_cols=185 Identities=19% Similarity=0.271 Sum_probs=129.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCC----CCCCCCCcccHHHHHHHHHHHHhhCCCCcE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST----GKASLTGFAEVEDVIAVCKWVSENLPTNRI 116 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 116 (230)
.-+||+.||.+. ..++..+...+..|+.+|+.|..++++..-... .++.....- .......+..++..+...++
T Consensus 14 ~~tilLaHGAGa-smdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~-~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 14 PVTILLAHGAGA-SMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTL-NPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred CEEEEEecCCCC-CCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccC-CHHHHHHHHHHHhcccCCce
Confidence 567999999864 456677889999999999999999998643221 111111111 24445556667777777899
Q ss_pred EEEEecchHHHHHHhhhc-ccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccC
Q 026965 117 LLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAG 195 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 195 (230)
++-|+||||.++.+++.. .-.+.+++++++|+.....-. .-..+.+..+++|+++.+|+.|++-..++.. -..+..
T Consensus 92 i~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe-~~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~ 168 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPE-QLRTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSD 168 (213)
T ss_pred eeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcc-cchhhhccCCCCCeEEeecccccccCHHHHH--hhhcCC
Confidence 999999999999987753 345889999999987533221 1223456778999999999999998877763 223446
Q ss_pred ceEEEEecCCCcccc--------cChhhHHHHHHHHHHHHhhC
Q 026965 196 RVETHLIEGASHFQM--------EGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 196 ~~~~~~~~~~~H~~~--------~~~~~~~~~~~~i~~fl~~~ 230 (230)
..+++++.++.|..- ...+-.+...+.+..|++.+
T Consensus 169 ~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 169 PIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred ceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 799999999999831 11223345666777777653
No 86
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.76 E-value=2.1e-17 Score=123.25 Aligned_cols=121 Identities=25% Similarity=0.388 Sum_probs=88.3
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc---hhhHH-------HHHHHHhCCCeEEEEeeccccc
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ---GLLKG-------IASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---~~~~~-------~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
||.+|.+.+|.| +. ...++.|+||..|+++ ... ..... ....++++||.|+..|.||.|.
T Consensus 1 DGv~L~adv~~P-~~------~~~~~~P~il~~tpY~---~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~ 70 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA------DGGGPFPVILTRTPYG---KGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGG 70 (272)
T ss_dssp TS-EEEEEEEEE---------TTSSSEEEEEEEESST---CTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTT
T ss_pred CCCEEEEEEEec-CC------CCCCcccEEEEccCcC---CCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccccc
Confidence 789999999999 21 2233489999999984 221 11111 1123999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHHhh-CCCCcEEEEEecchHHHHHHhhh-cccceEEEEEcC
Q 026965 85 STGKASLTGFAEVEDVIAVCKWVSEN-LPTNRILLVGSSAGAPIAGSAVD-EIEQVVGYVSLG 145 (230)
Q Consensus 85 s~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~ 145 (230)
|++........+.+|..++|+|+..+ ....+|.++|.|++|..++.+|. .+|.+++++...
T Consensus 71 S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~ 133 (272)
T PF02129_consen 71 SEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQS 133 (272)
T ss_dssp S-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEES
T ss_pred CCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecc
Confidence 99988776666789999999999887 33469999999999999997776 788999988764
No 87
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.75 E-value=5.1e-17 Score=121.86 Aligned_cols=190 Identities=18% Similarity=0.256 Sum_probs=113.8
Q ss_pred CccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchh------------------hHHH
Q 026965 2 SSYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGL------------------LKGI 63 (230)
Q Consensus 2 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~------------------~~~~ 63 (230)
+++..|++.|.+.++..+.++++.|++. +++.|+||++||-+ +.... -..+
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~--------~~p~PAVL~lHgHg---~~Ke~~~g~~gv~~~~~~~~~~~~~~~ 152 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA--------KGPFPAVLCLHGHG---GGKEKMAGEDGVSPDLKDDYDDPKQDY 152 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT----------S-EEEEEEE--TT-----HHHHCT---SSGCG--STTSTTT-H
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC--------CCCCCEEEEeCCCC---CCcccccCCcccccccchhhccccccH
Confidence 3578899999999999999999999873 22389999999974 22211 1236
Q ss_pred HHHHHhCCCeEEEEeecccccCCCCCCCCC---c--c----------------cHHHHHHHHHHHHhh--CCCCcEEEEE
Q 026965 64 ASGLANKGFKAVTFDMRGVGRSTGKASLTG---F--A----------------EVEDVIAVCKWVSEN--LPTNRILLVG 120 (230)
Q Consensus 64 ~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~---~--~----------------~~~d~~~~~~~l~~~--~~~~~i~l~G 120 (230)
+..|+++||.|+++|.+|+|+......... . . ..-|...+++++.+. ++.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 789999999999999999998765332111 0 0 033445578888664 6789999999
Q ss_pred ecchHHHHHHhhhcccceEEEEEcCCcchhhhh--hhc----------cc-------------ccccccC--CCCCEEEE
Q 026965 121 SSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMAS--ILF----------GR-------------HHKAILK--SPKPKLFV 173 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------~~-------------~~~~~~~--~~~p~l~i 173 (230)
+||||..++.++...++|++.+..+........ .+. .. ....+.. ..-|+|++
T Consensus 233 fSmGg~~a~~LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~ 312 (390)
T PF12715_consen 233 FSMGGYRAWWLAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFE 312 (390)
T ss_dssp EGGGHHHHHHHHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEES
T ss_pred ecccHHHHHHHHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhh
Confidence 999999999999999999888876554322211 110 00 0011111 25699999
Q ss_pred ecCCCcccCHHHHHHHHHhcc--CceEEEEecC
Q 026965 174 MGTRDGFTSVKQLQNKLSSAA--GRVETHLIEG 204 (230)
Q Consensus 174 ~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 204 (230)
.|.+|..+|. +++.++... .+.+++.+|+
T Consensus 313 nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 313 NGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp S-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred cCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 9999999865 455555554 4688888875
No 88
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.75 E-value=1.3e-16 Score=137.99 Aligned_cols=199 Identities=19% Similarity=0.242 Sum_probs=127.4
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH-----HHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG-----IASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
+..+.|.|..... .+....++||++||+ ..+...|.. +.+.|.++||+|+++|+ |.++.......
T Consensus 49 ~~l~~y~~~~~~~----~~~~~~~plllvhg~---~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~ 118 (994)
T PRK07868 49 YRLRRYFPPDNRP----GQPPVGPPVLMVHPM---MMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGME 118 (994)
T ss_pred EEEEEeCCCCccc----cccCCCCcEEEECCC---CCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCcc
Confidence 5566667754210 001236899999998 455555654 47899999999999995 55443322211
Q ss_pred cccHHHHHHHHHH---HHhhCCCCcEEEEEecchHHHHHHhhh-ccc-ceEEEEEcCCcchhh-------------h---
Q 026965 94 FAEVEDVIAVCKW---VSENLPTNRILLVGSSAGAPIAGSAVD-EIE-QVVGYVSLGYPFGMM-------------A--- 152 (230)
Q Consensus 94 ~~~~~d~~~~~~~---l~~~~~~~~i~l~G~S~Gg~~a~~~~~-~~~-~~~~~~~~~~~~~~~-------------~--- 152 (230)
....+++..+++. ++.. ..+++.++||||||.+++.++. +++ ++.++++++.|.... .
T Consensus 119 ~~l~~~i~~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~ 197 (994)
T PRK07868 119 RNLADHVVALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAAD 197 (994)
T ss_pred CCHHHHHHHHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccc
Confidence 2222333333333 3222 3468999999999999987664 444 678887754442100 0
Q ss_pred -------------h------------------h------------hcc-----c----c-c-------------------
Q 026965 153 -------------S------------------I------------LFG-----R----H-H------------------- 160 (230)
Q Consensus 153 -------------~------------------~------------~~~-----~----~-~------------------- 160 (230)
. . ... . . +
T Consensus 198 ~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n 277 (994)
T PRK07868 198 FMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHN 277 (994)
T ss_pred cchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhC
Confidence 0 0 000 0 0 0
Q ss_pred -------------ccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEE-EEecCCCcc-cccChhhHHHHHHHHHH
Q 026965 161 -------------KAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVET-HLIEGASHF-QMEGPAYDAQMVNLILD 225 (230)
Q Consensus 161 -------------~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~H~-~~~~~~~~~~~~~~i~~ 225 (230)
..+.++++|+|+++|++|.++|++.++.+ .+..++.++ .+++++||+ ++-.....++++..|.+
T Consensus 278 ~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l-~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~ 356 (994)
T PRK07868 278 RMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGI-RRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVAD 356 (994)
T ss_pred cccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHH-HHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHH
Confidence 02456789999999999999999998865 444577776 677899999 66555566688899999
Q ss_pred HHhh
Q 026965 226 FIAS 229 (230)
Q Consensus 226 fl~~ 229 (230)
||++
T Consensus 357 wl~~ 360 (994)
T PRK07868 357 WVKW 360 (994)
T ss_pred HHHH
Confidence 9874
No 89
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.1e-16 Score=125.52 Aligned_cols=216 Identities=19% Similarity=0.204 Sum_probs=155.0
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH----HHHHHHhCCCeEEEEeeccc
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG----IASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~g~ 82 (230)
+-+.+.+..|..+++-+|.|.+. ++..+.|+++++.|++..--....|.. -...|++.||.|+.+|-||.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~------~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS 687 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNF------QPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGS 687 (867)
T ss_pred hheeeecCCCcEEEEEEEccccC------CCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCc
Confidence 44567777889999999999887 444559999999999743333333332 24678899999999999986
Q ss_pred ccCCCC-----CCCCCcccHHHHHHHHHHHHhhC---CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhh
Q 026965 83 GRSTGK-----ASLTGFAEVEDVIAVCKWVSENL---PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI 154 (230)
Q Consensus 83 g~s~~~-----~~~~~~~~~~d~~~~~~~l~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
-..... ....+..+++|-.+.++++.++. +.++|.+-|+|+||+++++.+.++|++..+++.+.|...+..+
T Consensus 688 ~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~Y 767 (867)
T KOG2281|consen 688 AHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLY 767 (867)
T ss_pred cccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeee
Confidence 443321 23445556888888899998874 6789999999999999999999999999999988886543322
Q ss_pred hcc--------c--------------ccccccCCCCCEEEEecCCCcccCHHHHHHHH---HhccCceEEEEecCCCccc
Q 026965 155 LFG--------R--------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKL---SSAAGRVETHLIEGASHFQ 209 (230)
Q Consensus 155 ~~~--------~--------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~---~~~~~~~~~~~~~~~~H~~ 209 (230)
-.. . ....+..-....+++||--|+.|...+...+. .++++..++.+||+.-|..
T Consensus 768 DTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsi 847 (867)
T KOG2281|consen 768 DTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSI 847 (867)
T ss_pred cccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEcccccccc
Confidence 110 0 11223333556899999999999887765444 4556789999999999984
Q ss_pred ccChhhHHHHHHHHHHHHhh
Q 026965 210 MEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 210 ~~~~~~~~~~~~~i~~fl~~ 229 (230)
- .++...-+-..+..|+++
T Consensus 848 R-~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 848 R-NPESGIYYEARLLHFLQE 866 (867)
T ss_pred C-CCccchhHHHHHHHHHhh
Confidence 3 222223455667777765
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.74 E-value=4.9e-16 Score=126.55 Aligned_cols=122 Identities=24% Similarity=0.295 Sum_probs=95.1
Q ss_pred ecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch----hhHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 12 ETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG----LLKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 12 ~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~----~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
+..||.+|.+.+|.|.+. + +.|+||++||++ .... ........|+++||.|+++|+||+|.|++
T Consensus 2 ~~~DG~~L~~~~~~P~~~------~---~~P~Il~~~gyg---~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g 69 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGG------G---PVPVILSRTPYG---KDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEG 69 (550)
T ss_pred cCCCCCEEEEEEEecCCC------C---CCCEEEEecCCC---CchhhccccccccHHHHHhCCcEEEEEeccccccCCC
Confidence 467999999999999753 2 289999999985 2221 22335678899999999999999999998
Q ss_pred CCCCCCcccHHHHHHHHHHHHhh-CCCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcC
Q 026965 88 KASLTGFAEVEDVIAVCKWVSEN-LPTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLG 145 (230)
Q Consensus 88 ~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~ 145 (230)
........+.+|+.++++++..+ ....+|+++|+|+||.+++.++.. ++.+++++...
T Consensus 70 ~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~ 129 (550)
T TIGR00976 70 EFDLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQE 129 (550)
T ss_pred ceEecCcccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecC
Confidence 75444345589999999999776 334699999999999999987765 56777777653
No 91
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=1.8e-16 Score=109.96 Aligned_cols=203 Identities=18% Similarity=0.261 Sum_probs=136.3
Q ss_pred EEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCC
Q 026965 9 CAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGK 88 (230)
Q Consensus 9 ~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 88 (230)
..+...||..+.++.|...+. .+-.+++-|.+ +....+|++++..+++.||.|+.+|+||.|.|...
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~-----------~~g~~~va~a~--Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~ 74 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGK-----------ASGRLVVAGAT--GVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPA 74 (281)
T ss_pred cccccCCCccCccccccCCCC-----------CCCcEEecccC--CcchhHhHHHHHHhhccCceEEEEecccccCCCcc
Confidence 567788999999999976554 33344445542 66778899999999999999999999999999865
Q ss_pred CCC---CCccc--HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcC------------------
Q 026965 89 ASL---TGFAE--VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLG------------------ 145 (230)
Q Consensus 89 ~~~---~~~~~--~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~------------------ 145 (230)
... ..+.+ ..|+.+.++++++.++..+...+|||+||.+...+.... +..+....+
T Consensus 75 ~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~ 153 (281)
T COG4757 75 SLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHP-KYAAFAVFGSGAGWSGWMGLRERLGAV 153 (281)
T ss_pred ccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccCc-ccceeeEeccccccccchhhhhcccce
Confidence 433 11111 688999999999988888999999999999877666543 333332221
Q ss_pred -------Ccchhhhhhh----c------------------------------ccccccccCCCCCEEEEecCCCcccCHH
Q 026965 146 -------YPFGMMASIL----F------------------------------GRHHKAILKSPKPKLFVMGTRDGFTSVK 184 (230)
Q Consensus 146 -------~~~~~~~~~~----~------------------------------~~~~~~~~~~~~p~l~i~g~~D~~~~~~ 184 (230)
++.......+ . ....+....+++|+..+...+|+.+|+.
T Consensus 154 ~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~A 233 (281)
T COG4757 154 LLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPA 233 (281)
T ss_pred eeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHH
Confidence 1111111000 0 0011234468999999999999999988
Q ss_pred HHHHHHHhcc-CceEEEEecC----CCcc-cccChhhHHHHHHHHHHHH
Q 026965 185 QLQNKLSSAA-GRVETHLIEG----ASHF-QMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 185 ~~~~~~~~~~-~~~~~~~~~~----~~H~-~~~~~~~~~~~~~~i~~fl 227 (230)
....+..-.. ...+...++. -||+ .+.++. +.+.+.+.+|+
T Consensus 234 s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~--Ealwk~~L~w~ 280 (281)
T COG4757 234 SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPF--EALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhhhcCcccceecCcccCcccchhhhccch--HHHHHHHHHhh
Confidence 7664433221 2344455543 5899 665552 36677777665
No 92
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.73 E-value=1.3e-15 Score=109.59 Aligned_cols=176 Identities=14% Similarity=0.165 Sum_probs=120.6
Q ss_pred eEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHH
Q 026965 20 NARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVED 99 (230)
Q Consensus 20 ~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d 99 (230)
...++.|++. ++.|++||+||+ ......|..+.++++++||.|+.+|+..... .....++++
T Consensus 5 ~l~v~~P~~~---------g~yPVv~f~~G~---~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~------~~~~~~~~~ 66 (259)
T PF12740_consen 5 PLLVYYPSSA---------GTYPVVLFLHGF---LLINSWYSQLLEHVASHGYIVVAPDLYSIGG------PDDTDEVAS 66 (259)
T ss_pred CeEEEecCCC---------CCcCEEEEeCCc---CCCHHHHHHHHHHHHhCceEEEEecccccCC------CCcchhHHH
Confidence 3456677654 239999999998 4666779999999999999999999654322 122233688
Q ss_pred HHHHHHHHHhh----------CCCCcEEEEEecchHHHHHHhhhcc------cceEEEEEcCCcchhhhhhhc----ccc
Q 026965 100 VIAVCKWVSEN----------LPTNRILLVGSSAGAPIAGSAVDEI------EQVVGYVSLGYPFGMMASILF----GRH 159 (230)
Q Consensus 100 ~~~~~~~l~~~----------~~~~~i~l~G~S~Gg~~a~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~ 159 (230)
+.++++|+.+. .+..++.+.|||.||-++..++... .++++++++.+..+....... ...
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~ 146 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTY 146 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccC
Confidence 88889987663 2567899999999999999776543 467788887655422111100 011
Q ss_pred cccccCCCCCEEEEecCCCc---------ccCHH-HHHHHHHhccCceEEEEecCCCcc-cccCh
Q 026965 160 HKAILKSPKPKLFVMGTRDG---------FTSVK-QLQNKLSSAAGRVETHLIEGASHF-QMEGP 213 (230)
Q Consensus 160 ~~~~~~~~~p~l~i~g~~D~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~ 213 (230)
...-.+..+|++++-..-+. ..|.. .-++++.+..+.+-.++.++.||. ++++.
T Consensus 147 ~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 147 TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 12222356999999877664 22322 234578888888888888999999 77655
No 93
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.73 E-value=2.1e-15 Score=114.89 Aligned_cols=200 Identities=21% Similarity=0.255 Sum_probs=131.7
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh-HHHHHHHHhCCCeEEEEeecccccCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL-KGIASGLANKGFKAVTFDMRGVGRSTGKASLT 92 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 92 (230)
.++..+.+++|.|.. +...+.|+||++||++|..++.... ..+...+...|+.|+++|||-.. ...
T Consensus 59 ~~~~~~~~~~y~p~~-------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP------e~~ 125 (312)
T COG0657 59 PSGDGVPVRVYRPDR-------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP------EHP 125 (312)
T ss_pred CCCCceeEEEECCCC-------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC------CCC
Confidence 344557789999821 2233489999999999888888877 44555666689999999999432 223
Q ss_pred CcccHHHHHHHHHHHHhh-----CCCCcEEEEEecchHHHHHHhhhcc-----cceEEEEEcCCcchhhh----------
Q 026965 93 GFAEVEDVIAVCKWVSEN-----LPTNRILLVGSSAGAPIAGSAVDEI-----EQVVGYVSLGYPFGMMA---------- 152 (230)
Q Consensus 93 ~~~~~~d~~~~~~~l~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~~~~~~~~~~~---------- 152 (230)
....++|+.+++.|+.++ .+.++|.++|+|.||.+++.++... +...+.+++.+......
T Consensus 126 ~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~ 205 (312)
T COG0657 126 FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGE 205 (312)
T ss_pred CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCC
Confidence 333479999999999876 4578999999999999999776432 34566666543322221
Q ss_pred ---------h-h----hccc-------cc-----ccccCCCCCEEEEecCCCcccCHHH-HHHHHHhccCceEEEEecCC
Q 026965 153 ---------S-I----LFGR-------HH-----KAILKSPKPKLFVMGTRDGFTSVKQ-LQNKLSSAAGRVETHLIEGA 205 (230)
Q Consensus 153 ---------~-~----~~~~-------~~-----~~~~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 205 (230)
. + .... .. ..+.. -.|+++++|+.|.+.+... ..+.+++.+..++++.+++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~ 284 (312)
T COG0657 206 ADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGM 284 (312)
T ss_pred ccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 0 0 0000 00 01222 4689999999999998322 23356666677899999999
Q ss_pred Cccc--ccChhhHHHHHHHHHHHHh
Q 026965 206 SHFQ--MEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 206 ~H~~--~~~~~~~~~~~~~i~~fl~ 228 (230)
.|.+ +..+.. .+....+.+|++
T Consensus 285 ~H~f~~~~~~~a-~~~~~~~~~~l~ 308 (312)
T COG0657 285 IHGFDLLTGPEA-RSALRQIAAFLR 308 (312)
T ss_pred ceeccccCcHHH-HHHHHHHHHHHH
Confidence 9985 333322 233455555554
No 94
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.72 E-value=2.7e-15 Score=112.84 Aligned_cols=204 Identities=22% Similarity=0.227 Sum_probs=137.9
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCC--chhhHHHHHHHH-hCCCeEEEEeecccccCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGC--QGLLKGIASGLA-NKGFKAVTFDMRGVGRSTGKAS 90 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~--~~~~~~~~~~l~-~~g~~v~~~d~~g~g~s~~~~~ 90 (230)
.....+..++|.|.... +..+.|+||++||+||.-++ ...|..+...++ +.+..|+++|||-. +.
T Consensus 69 ~~~~~l~vRly~P~~~~------~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA------PE 136 (336)
T KOG1515|consen 69 DPFTNLPVRLYRPTSSS------SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA------PE 136 (336)
T ss_pred cCCCCeEEEEEcCCCCC------cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC------CC
Confidence 34456899999998752 22568999999999986664 567788888875 45899999999943 22
Q ss_pred CCCcccHHHHHHHHHHHHhh------CCCCcEEEEEecchHHHHHHhhhc-------ccceEEEEEcCCcchhhhh----
Q 026965 91 LTGFAEVEDVIAVCKWVSEN------LPTNRILLVGSSAGAPIAGSAVDE-------IEQVVGYVSLGYPFGMMAS---- 153 (230)
Q Consensus 91 ~~~~~~~~d~~~~~~~l~~~------~~~~~i~l~G~S~Gg~~a~~~~~~-------~~~~~~~~~~~~~~~~~~~---- 153 (230)
.......+|...++.|+.++ .+.++++|+|-|.||.+|..++.+ .+++++.+++.+-+.....
T Consensus 137 h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e 216 (336)
T KOG1515|consen 137 HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESE 216 (336)
T ss_pred CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHH
Confidence 22333357777777777663 678999999999999999966642 3678888887543321100
Q ss_pred ------------------hhc---cccc-----------c-----cccCCC-CCEEEEecCCCcccCHHHH-HHHHHhcc
Q 026965 154 ------------------ILF---GRHH-----------K-----AILKSP-KPKLFVMGTRDGFTSVKQL-QNKLSSAA 194 (230)
Q Consensus 154 ------------------~~~---~~~~-----------~-----~~~~~~-~p~l~i~g~~D~~~~~~~~-~~~~~~~~ 194 (230)
++. .... . ...... .|++++.++.|.+...... .+.+++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~G 296 (336)
T KOG1515|consen 217 KQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAG 296 (336)
T ss_pred HHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcC
Confidence 000 0000 0 111123 3599999999988754322 23566666
Q ss_pred CceEEEEecCCCcc-cccChh--hHHHHHHHHHHHHhh
Q 026965 195 GRVETHLIEGASHF-QMEGPA--YDAQMVNLILDFIAS 229 (230)
Q Consensus 195 ~~~~~~~~~~~~H~-~~~~~~--~~~~~~~~i~~fl~~ 229 (230)
-++++..++++.|. +.-++. ...++.+.+.+|+++
T Consensus 297 v~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 297 VEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred CeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 67888899999999 433332 567888999999875
No 95
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=5.8e-16 Score=109.03 Aligned_cols=175 Identities=17% Similarity=0.220 Sum_probs=118.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh----CCCCcE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN----LPTNRI 116 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~~i 116 (230)
..-++++|-. |++...|..+...|... +.++.+++||.|..-..+.. .|+..+.+.+... +..+++
T Consensus 7 ~~~L~cfP~A---GGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~------~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 7 RLRLFCFPHA---GGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL------TDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CceEEEecCC---CCCHHHHHHHHhhCCch-hheeeecCCCcccccCCccc------ccHHHHHHHHHHHhccccCCCCe
Confidence 5667777765 68888999999988875 99999999999876544433 3444444444443 334689
Q ss_pred EEEEecchHHHHHHhhhccc----ceEEEEEcCCcchhhhh--h----------------------hccc----------
Q 026965 117 LLVGSSAGAPIAGSAVDEIE----QVVGYVSLGYPFGMMAS--I----------------------LFGR---------- 158 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~~~~----~~~~~~~~~~~~~~~~~--~----------------------~~~~---------- 158 (230)
.++||||||.+|..++.+.. ...++.+.+........ . .+.+
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPi 156 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPI 156 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHH
Confidence 99999999999998886431 13444333322111000 0 0000
Q ss_pred -----------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 159 -----------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 159 -----------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
....-..+.+|+.++.|++|..+..+....+-+......++.+++| ||+++.+.. +++.+.|.+.+
T Consensus 157 lRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~--~~v~~~i~~~l 233 (244)
T COG3208 157 LRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQR--EEVLARLEQHL 233 (244)
T ss_pred HHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhH--HHHHHHHHHHh
Confidence 0112235789999999999999999888877777777899999996 999554322 37777777766
Q ss_pred h
Q 026965 228 A 228 (230)
Q Consensus 228 ~ 228 (230)
.
T Consensus 234 ~ 234 (244)
T COG3208 234 A 234 (244)
T ss_pred h
Confidence 3
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.71 E-value=1.3e-15 Score=107.26 Aligned_cols=171 Identities=19% Similarity=0.159 Sum_probs=108.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc--ccCCC----CCCCCCcc----cHHHHHHHHHHHHhh
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV--GRSTG----KASLTGFA----EVEDVIAVCKWVSEN 110 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s~~----~~~~~~~~----~~~d~~~~~~~l~~~ 110 (230)
.|+||++||. |++...+..+.+.+..+ +.++.+.-+-. |.... ........ ..+.+.+.++.+..+
T Consensus 18 ~~~iilLHG~---Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 18 APLLILLHGL---GGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CcEEEEEecC---CCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 7899999997 67777777766666665 66666632211 11000 00000110 134444445554455
Q ss_pred C--CCCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHH
Q 026965 111 L--PTNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQ 187 (230)
Q Consensus 111 ~--~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~ 187 (230)
+ +.++++++|+|.||.+++.+....+ .+.+++++.+....... ..-.....|++++||+.|++||...+.
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------~~~~~~~~pill~hG~~Dpvvp~~~~~ 166 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------LLPDLAGTPILLSHGTEDPVVPLALAE 166 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc-------cccccCCCeEEEeccCcCCccCHHHHH
Confidence 4 4589999999999999997776554 55666666544332111 122234689999999999999976654
Q ss_pred ---HHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 188 ---NKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 188 ---~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+.+++.+.+++...++ .||.... +..+.+++|+.+
T Consensus 167 ~l~~~l~~~g~~v~~~~~~-~GH~i~~------e~~~~~~~wl~~ 204 (207)
T COG0400 167 ALAEYLTASGADVEVRWHE-GGHEIPP------EELEAARSWLAN 204 (207)
T ss_pred HHHHHHHHcCCCEEEEEec-CCCcCCH------HHHHHHHHHHHh
Confidence 4556667789999999 7997321 445666677764
No 97
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.70 E-value=2.5e-16 Score=113.33 Aligned_cols=160 Identities=28% Similarity=0.337 Sum_probs=107.6
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHh-CCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh-----CCCCcEE
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLAN-KGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN-----LPTNRIL 117 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~-----~~~~~i~ 117 (230)
||++||++|..++......++..+++ .|+.|+++|||-. +.......++|+.++++|+.++ ++.++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKNADKLGIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc------ccccccccccccccceeeeccccccccccccceE
Confidence 79999999988888888888888875 8999999999943 2223334489999999999887 7788999
Q ss_pred EEEecchHHHHHHhhhc-----ccceEEEEEcCCcchh--h--hhh-----hcc---------------------c---c
Q 026965 118 LVGSSAGAPIAGSAVDE-----IEQVVGYVSLGYPFGM--M--ASI-----LFG---------------------R---H 159 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~-----~~~~~~~~~~~~~~~~--~--~~~-----~~~---------------------~---~ 159 (230)
++|+|.||.+++.++.. .+.+.+++++.+.... . ... ... . .
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSDRDDPL 154 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGGTTSTT
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999977742 2357777777654322 0 000 000 0 0
Q ss_pred cccc----cCCCCCEEEEecCCCcccCHHH-HHHHHHhccCceEEEEecCCCccc
Q 026965 160 HKAI----LKSPKPKLFVMGTRDGFTSVKQ-LQNKLSSAAGRVETHLIEGASHFQ 209 (230)
Q Consensus 160 ~~~~----~~~~~p~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~ 209 (230)
...+ .+.-.|+++++|+.|.+++... ..+.+++.+.++++++++|..|.+
T Consensus 155 ~sp~~~~~~~~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 155 ASPLNASDLKGLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TSGGGSSCCTTCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred cccccccccccCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 0001 1113489999999998874221 223455556789999999999984
No 98
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=6.6e-15 Score=122.59 Aligned_cols=207 Identities=17% Similarity=0.139 Sum_probs=140.8
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-hhHHHHH-HHHhCCCeEEEEeecccccCCCC----
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-LLKGIAS-GLANKGFKAVTFDMRGVGRSTGK---- 88 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~~-~l~~~g~~v~~~d~~g~g~s~~~---- 88 (230)
+|....+....|++. .+..+.|+++.+||++++..... ....+.. .+...|+.|+.+|.||.|.....
T Consensus 506 ~~~~~~~~~~lP~~~------~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~ 579 (755)
T KOG2100|consen 506 DGITANAILILPPNF------DPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSA 579 (755)
T ss_pred ccEEEEEEEecCCCC------CCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHH
Confidence 888899999999876 33445899999999863111111 1122333 46677999999999998766543
Q ss_pred -CCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhccc-ceEEE-EEcCCcchhh-------hhhh-
Q 026965 89 -ASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIE-QVVGY-VSLGYPFGMM-------ASIL- 155 (230)
Q Consensus 89 -~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~-~~~~~~~~~~-------~~~~- 155 (230)
....+..+++|...+++.+.+. +|.+++.++|+|.||++++.++...+ ++.++ +.+.+..... .+++
T Consensus 580 ~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg 659 (755)
T KOG2100|consen 580 LPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMG 659 (755)
T ss_pred hhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcC
Confidence 2334445578888888887765 68899999999999999998888775 77666 5554333221 1110
Q ss_pred ----------cccccccccCCCCCE-EEEecCCCcccCHHHHHHHHHhc---cCceEEEEecCCCcccccChhhHHHHHH
Q 026965 156 ----------FGRHHKAILKSPKPK-LFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLIEGASHFQMEGPAYDAQMVN 221 (230)
Q Consensus 156 ----------~~~~~~~~~~~~~p~-l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~~~~~~~~~~~~~~ 221 (230)
.......+..++.|. |++||+.|..|+.+++..+++++ +-.++..++|+.+|.+..... ...+..
T Consensus 660 ~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~-~~~~~~ 738 (755)
T KOG2100|consen 660 LPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEV-ISHLYE 738 (755)
T ss_pred CCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccc-hHHHHH
Confidence 001112234456665 99999999999998877665554 335899999999999554331 126667
Q ss_pred HHHHHHh
Q 026965 222 LILDFIA 228 (230)
Q Consensus 222 ~i~~fl~ 228 (230)
.+..|++
T Consensus 739 ~~~~~~~ 745 (755)
T KOG2100|consen 739 KLDRFLR 745 (755)
T ss_pred HHHHHHH
Confidence 7777765
No 99
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.68 E-value=2.2e-14 Score=103.23 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=81.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCC-CcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPT-NRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~-~~i~l~ 119 (230)
..+||-+||. .++..+++.+.+.|.+.|.+++.+++||+|.+++.+...... .+-...++.+.+.++. ++++++
T Consensus 35 ~gTVv~~hGs---PGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n--~er~~~~~~ll~~l~i~~~~i~~ 109 (297)
T PF06342_consen 35 LGTVVAFHGS---PGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTN--EERQNFVNALLDELGIKGKLIFL 109 (297)
T ss_pred ceeEEEecCC---CCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccCh--HHHHHHHHHHHHHcCCCCceEEE
Confidence 5589999996 688899999999999999999999999999999876654432 4455556666676654 678999
Q ss_pred EecchHHHHHHhhhcccceEEEEEcCCc
Q 026965 120 GSSAGAPIAGSAVDEIEQVVGYVSLGYP 147 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~~~~~~~~~~~~~ 147 (230)
|||.|+-.|+.++...+ ..+++++.++
T Consensus 110 gHSrGcenal~la~~~~-~~g~~lin~~ 136 (297)
T PF06342_consen 110 GHSRGCENALQLAVTHP-LHGLVLINPP 136 (297)
T ss_pred EeccchHHHHHHHhcCc-cceEEEecCC
Confidence 99999999998887765 5677777644
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.66 E-value=3.9e-15 Score=105.89 Aligned_cols=165 Identities=17% Similarity=0.216 Sum_probs=99.0
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHH---HHHHHHhCCCeEEEEeecccccCCCC------C
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKG---IASGLANKGFKAVTFDMRGVGRSTGK------A 89 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s~~~------~ 89 (230)
|.|++|.|+... ..+.|+||++||.+ .+...+.. +.+.-.++||.|+.|+.......... .
T Consensus 1 l~Y~lYvP~~~~-------~~~~PLVv~LHG~~---~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~ 70 (220)
T PF10503_consen 1 LSYRLYVPPGAP-------RGPVPLVVVLHGCG---QSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDD 70 (220)
T ss_pred CcEEEecCCCCC-------CCCCCEEEEeCCCC---CCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccc
Confidence 579999998542 22379999999984 44444332 33333446899999986422111110 1
Q ss_pred CCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcC-C-cchhhh------hhhcc-c
Q 026965 90 SLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLG-Y-PFGMMA------SILFG-R 158 (230)
Q Consensus 90 ~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~-~-~~~~~~------~~~~~-~ 158 (230)
......+...+..+++++..+ +|.+||++.|+|.||.++..++..+|++.+.+.+. . +..... ..+.. .
T Consensus 71 ~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~ 150 (220)
T PF10503_consen 71 QQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGP 150 (220)
T ss_pred cccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCC
Confidence 111222356677788888776 56789999999999999998887777666555432 1 111100 00000 0
Q ss_pred ----------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc
Q 026965 159 ----------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA 193 (230)
Q Consensus 159 ----------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 193 (230)
....-..-..|++++||+.|..|.+....+..++.
T Consensus 151 ~~~p~~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 151 RPAPAAAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCChHHHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 00000112469999999999999887766555443
No 101
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.66 E-value=8.5e-16 Score=104.69 Aligned_cols=177 Identities=12% Similarity=0.119 Sum_probs=126.5
Q ss_pred eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccH
Q 026965 18 KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEV 97 (230)
Q Consensus 18 ~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 97 (230)
+-...+|+|... .++.||+||+-|..++.......+.-+..+||+|.++++ +.++... .-...+
T Consensus 55 ~q~VDIwg~~~~-----------~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~h--tL~qt~ 118 (270)
T KOG4627|consen 55 RQLVDIWGSTNQ-----------AKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVH--TLEQTM 118 (270)
T ss_pred ceEEEEecCCCC-----------ccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccc--cHHHHH
Confidence 556678888665 889999999988888887777888888889999999965 3332211 112226
Q ss_pred HHHHHHHHHHHhhCCC-CcEEEEEecchHHHHHHhhh--cccceEEEEEcCCcchhhhhhh----------------ccc
Q 026965 98 EDVIAVCKWVSENLPT-NRILLVGSSAGAPIAGSAVD--EIEQVVGYVSLGYPFGMMASIL----------------FGR 158 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~-~~i~l~G~S~Gg~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 158 (230)
.++...++|+.+.... +.+.+-|||.|+.+++.+.. +.|++.++++++..+....-.- ..-
T Consensus 119 ~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Sc 198 (270)
T KOG4627|consen 119 TQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSC 198 (270)
T ss_pred HHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCc
Confidence 8888889998887655 55667789999999996664 4578888877765543221110 011
Q ss_pred ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-ccc
Q 026965 159 HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QME 211 (230)
Q Consensus 159 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~ 211 (230)
....+..++.|+|++.+++|.---.++.+.+..++ ..+.+..+++.+|+ .++
T Consensus 199 dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 199 DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIE 251 (270)
T ss_pred cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHH
Confidence 22234567899999999999776678877655554 45899999999999 543
No 102
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.65 E-value=1.3e-14 Score=99.86 Aligned_cols=145 Identities=17% Similarity=0.180 Sum_probs=88.8
Q ss_pred EEEECCCCCCCCCchhh-HHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCC--CCcEEEEE
Q 026965 44 IVLVHPYSILGGCQGLL-KGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLP--TNRILLVG 120 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G 120 (230)
|+++||++ ++....| ..+.+.+... +.|-.+++- .-++.+++..+.+.++ .++++++|
T Consensus 1 v~IvhG~~--~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------~P~~~~W~~~l~~~i~~~~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYG--GSPPDHWQPWLERQLENS-VRVEQPDWD----------------NPDLDEWVQALDQAIDAIDEPTILVA 61 (171)
T ss_dssp EEEE--TT--SSTTTSTHHHHHHHHTTS-EEEEEC--T----------------S--HHHHHHHHHHCCHC-TTTEEEEE
T ss_pred CEEeCCCC--CCCccHHHHHHHHhCCCC-eEEeccccC----------------CCCHHHHHHHHHHHHhhcCCCeEEEE
Confidence 68899996 3333444 4566777665 666666551 1234445555544432 35699999
Q ss_pred ecchHHHHHHhh-h-cccceEEEEEcCCcchhhhhh----hcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc
Q 026965 121 SSAGAPIAGSAV-D-EIEQVVGYVSLGYPFGMMASI----LFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA 194 (230)
Q Consensus 121 ~S~Gg~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 194 (230)
||+|+..++.++ . ...++.++++++++....... .............+|.+++.+++|+++|.+.++++.+++
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l- 140 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL- 140 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-
Confidence 999999999777 4 346788888887665421110 001111122234678899999999999999998777777
Q ss_pred CceEEEEecCCCccc
Q 026965 195 GRVETHLIEGASHFQ 209 (230)
Q Consensus 195 ~~~~~~~~~~~~H~~ 209 (230)
+++++.++++||+.
T Consensus 141 -~a~~~~~~~~GHf~ 154 (171)
T PF06821_consen 141 -GAELIILGGGGHFN 154 (171)
T ss_dssp -T-EEEEETS-TTSS
T ss_pred -CCCeEECCCCCCcc
Confidence 68999999999984
No 103
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.64 E-value=1.1e-14 Score=115.39 Aligned_cols=176 Identities=14% Similarity=0.134 Sum_probs=124.0
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh-----HHHHHHHHhCCCeEEEEeecccccCCCCCCCCC
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL-----KGIASGLANKGFKAVTFDMRGVGRSTGKASLTG 93 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 93 (230)
+..+.|.|.... .-.++||+++.. ......+ ..+.++|.++|+.|+++|+++-+..........
T Consensus 201 ~eLiqY~P~te~--------v~~~PLLIVPp~---INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldD 269 (560)
T TIGR01839 201 LELIQYKPITEQ--------QHARPLLVVPPQ---INKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLST 269 (560)
T ss_pred eEEEEeCCCCCC--------cCCCcEEEechh---hhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHH
Confidence 555666775431 115778889986 2222212 679999999999999999987655543332233
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHH----hhhccc--ceEEEEEcCCcchhhhhh----hc-------
Q 026965 94 FAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGS----AVDEIE--QVVGYVSLGYPFGMMASI----LF------- 156 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~----~~~~~~--~~~~~~~~~~~~~~~~~~----~~------- 156 (230)
+ ++.+.++++.+++.-+.+++.++|||+||.+++. ++...+ +++.++++..+.++...- +.
T Consensus 270 Y--v~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~ 347 (560)
T TIGR01839 270 Y--VDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEA 347 (560)
T ss_pred H--HHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHH
Confidence 3 4678888888888888999999999999999885 444443 588888877665432100 00
Q ss_pred ------c---------------------------------c---------------------------------------
Q 026965 157 ------G---------------------------------R--------------------------------------- 158 (230)
Q Consensus 157 ------~---------------------------------~--------------------------------------- 158 (230)
. +
T Consensus 348 ~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~ 427 (560)
T TIGR01839 348 AKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDA 427 (560)
T ss_pred HHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCC
Confidence 0 0
Q ss_pred -----ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc
Q 026965 159 -----HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 159 -----~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
..-.+.+|++|++++.|+.|.++|++.+....+....+++++..+ +||.
T Consensus 428 l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHI 481 (560)
T TIGR01839 428 LEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHI 481 (560)
T ss_pred EEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCcc
Confidence 001244689999999999999999999997777777778888887 5897
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.62 E-value=9.2e-14 Score=96.70 Aligned_cols=159 Identities=18% Similarity=0.210 Sum_probs=97.9
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCC--CeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKG--FKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS 121 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~ 121 (230)
++++||+. ++..+.....+.+.+.+.+ ..+..++++.. .+...+.++.+.+....+.+.|+|.
T Consensus 2 ilYlHGF~-Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFN-SSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCC-CCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 79999994 2222334556677787765 34556655421 2444455555556666667999999
Q ss_pred cchHHHHHHhhhcccceEEEEEcCCcchhhhhh---hccc--------------ccc---c----ccCCCCCEEEEecCC
Q 026965 122 SAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI---LFGR--------------HHK---A----ILKSPKPKLFVMGTR 177 (230)
Q Consensus 122 S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------~~~---~----~~~~~~p~l~i~g~~ 177 (230)
|+||+.|..++.+... .+ +++.+.+...... +-.. ... . ......++++++++.
T Consensus 67 SlGG~~A~~La~~~~~-~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~ 144 (187)
T PF05728_consen 67 SLGGFYATYLAERYGL-PA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTG 144 (187)
T ss_pred ChHHHHHHHHHHHhCC-CE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecC
Confidence 9999999999887643 33 5655544332211 1000 000 0 112356899999999
Q ss_pred CcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 178 DGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 178 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
|+++++..+...+. ++..++.+|++|.+.+-. +....|.+|+
T Consensus 145 DEvLd~~~a~~~~~----~~~~~i~~ggdH~f~~f~----~~l~~i~~f~ 186 (187)
T PF05728_consen 145 DEVLDYREAVAKYR----GCAQIIEEGGDHSFQDFE----EYLPQIIAFL 186 (187)
T ss_pred CcccCHHHHHHHhc----CceEEEEeCCCCCCccHH----HHHHHHHHhh
Confidence 99999966654443 344456678899865432 5566677775
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.62 E-value=4e-14 Score=118.31 Aligned_cols=146 Identities=17% Similarity=0.211 Sum_probs=108.0
Q ss_pred HHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh----------------CCCCcEEEEEecchH
Q 026965 62 GIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN----------------LPTNRILLVGSSAGA 125 (230)
Q Consensus 62 ~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~----------------~~~~~i~l~G~S~Gg 125 (230)
.+.++|+++||.|+..|.||.|.|++........+.+|..++|+|+..+ .-..+|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4568899999999999999999999987666666789999999999853 125799999999999
Q ss_pred HHHHHhhh-cccceEEEEEcCCcchhhh-----------------------hhhcc------------------------
Q 026965 126 PIAGSAVD-EIEQVVGYVSLGYPFGMMA-----------------------SILFG------------------------ 157 (230)
Q Consensus 126 ~~a~~~~~-~~~~~~~~~~~~~~~~~~~-----------------------~~~~~------------------------ 157 (230)
.+++.+|. .++.+++++...+..+... .....
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 99997765 5688888877543211100 00000
Q ss_pred ----------------cccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc---cCceEEEEecCCCcc
Q 026965 158 ----------------RHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLIEGASHF 208 (230)
Q Consensus 158 ----------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~ 208 (230)
.....+.++++|+|++||..|..++++++.++++++ ..+.++++.++ +|.
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~ 498 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHV 498 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-Ccc
Confidence 001234468999999999999999988776666655 34677877664 786
No 106
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.61 E-value=8.9e-14 Score=106.90 Aligned_cols=131 Identities=21% Similarity=0.268 Sum_probs=95.7
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh------HHHHHHHHhCCCeEEE
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL------KGIASGLANKGFKAVT 76 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~------~~~~~~l~~~g~~v~~ 76 (230)
+++.|+..+.|.||..+....+.... +++|+|++.||.- .++..| ..++-.|+++||+|..
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~----------~~rp~Vll~HGLl---~sS~~Wv~n~p~~sLaf~LadaGYDVWL 111 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGK----------KKRPVVLLQHGLL---ASSSSWVLNGPEQSLAFLLADAGYDVWL 111 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCC----------CCCCcEEEeeccc---cccccceecCccccHHHHHHHcCCceee
Confidence 46789999999999866666554432 2289999999983 333333 3567788999999999
Q ss_pred EeecccccCCCCCCC----------CCccc--HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc----ceEE
Q 026965 77 FDMRGVGRSTGKASL----------TGFAE--VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE----QVVG 140 (230)
Q Consensus 77 ~d~~g~g~s~~~~~~----------~~~~~--~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~----~~~~ 140 (230)
-+.||.-.|...... ..+.+ ..|+.+.++++.+.-+.+++..+|||+|+.....++...| +++.
T Consensus 112 gN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~ 191 (403)
T KOG2624|consen 112 GNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKS 191 (403)
T ss_pred ecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhhe
Confidence 999997666532111 11112 6899999999999888899999999999999996665443 3555
Q ss_pred EEEcCC
Q 026965 141 YVSLGY 146 (230)
Q Consensus 141 ~~~~~~ 146 (230)
+.++++
T Consensus 192 ~~aLAP 197 (403)
T KOG2624|consen 192 FIALAP 197 (403)
T ss_pred eeeecc
Confidence 555543
No 107
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.61 E-value=6e-14 Score=99.44 Aligned_cols=178 Identities=12% Similarity=0.156 Sum_probs=119.2
Q ss_pred ceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCccc
Q 026965 17 VKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAE 96 (230)
Q Consensus 17 ~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 96 (230)
......++.|+.. ++.|+|+|+||+ .-....|..+.++++++||.|++|++-.. . ......+
T Consensus 31 pPkpLlI~tP~~~---------G~yPVilF~HG~---~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~----~p~~~~E 92 (307)
T PF07224_consen 31 PPKPLLIVTPSEA---------GTYPVILFLHGF---NLYNSFYSQLLAHIASHGFIVVAPQLYTL--F----PPDGQDE 92 (307)
T ss_pred CCCCeEEecCCcC---------CCccEEEEeech---hhhhHHHHHHHHHHhhcCeEEEechhhcc--c----CCCchHH
Confidence 3466667777654 338999999998 57788999999999999999999998632 1 1334445
Q ss_pred HHHHHHHHHHHHhh----------CCCCcEEEEEecchHHHHHHhhhcc-c--ceEEEEEcCCcchhhhhhhcc----cc
Q 026965 97 VEDVIAVCKWVSEN----------LPTNRILLVGSSAGAPIAGSAVDEI-E--QVVGYVSLGYPFGMMASILFG----RH 159 (230)
Q Consensus 97 ~~d~~~~~~~l~~~----------~~~~~i~l~G~S~Gg~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~----~~ 159 (230)
+++..++++|+.+. .+..++.++|||.||-.|..+|..+ . .+.++|.+.+..+........ ..
T Consensus 93 i~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty 172 (307)
T PF07224_consen 93 IKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTY 172 (307)
T ss_pred HHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeec
Confidence 78899999998764 2457899999999999999777543 2 344555554433322111000 01
Q ss_pred cccccCCCCCEEEEecCCC-------cccCHH--HHHHHHHhccCceEEEEecCCCcc-cccC
Q 026965 160 HKAILKSPKPKLFVMGTRD-------GFTSVK--QLQNKLSSAAGRVETHLIEGASHF-QMEG 212 (230)
Q Consensus 160 ~~~~~~~~~p~l~i~g~~D-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~H~-~~~~ 212 (230)
...-..+.+|+++|-..-- +-+.+. .-++++++..+.+...+..+.||. ++++
T Consensus 173 ~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHmDmLDD 235 (307)
T PF07224_consen 173 VPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHMDMLDD 235 (307)
T ss_pred CCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeeccccccccccc
Confidence 1122245799999875544 112222 234588888877777788889999 6554
No 108
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=5.3e-14 Score=104.90 Aligned_cols=203 Identities=17% Similarity=0.170 Sum_probs=132.1
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch--------hhHHHH---HHHHhCCCeEEEEeecccc
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG--------LLKGIA---SGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~--------~~~~~~---~~l~~~g~~v~~~d~~g~g 83 (230)
++..|.|..|+.-+.. ...+|+++|+.+++..... .|..+. +.+....|.|++.|..|.+
T Consensus 34 ~~~~vay~T~Gtln~~---------~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c 104 (368)
T COG2021 34 SDARVAYETYGTLNAE---------KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGC 104 (368)
T ss_pred cCcEEEEEeccccccc---------CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCC
Confidence 4567899988876542 2679999999853211222 233332 2233345899999998865
Q ss_pred -cCCCCCCCC----------CcccHHHHHHHHHHHHhhCCCCcEE-EEEecchHHHHHHhhh-cccceEEEEEcCCcchh
Q 026965 84 -RSTGKASLT----------GFAEVEDVIAVCKWVSENLPTNRIL-LVGSSAGAPIAGSAVD-EIEQVVGYVSLGYPFGM 150 (230)
Q Consensus 84 -~s~~~~~~~----------~~~~~~d~~~~~~~l~~~~~~~~i~-l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~ 150 (230)
.|+++.... ....+.|...+-+.+.+.++.+++. ++|-||||+.++.++. .++++..++.++.+...
T Consensus 105 ~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~ 184 (368)
T COG2021 105 KGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARL 184 (368)
T ss_pred CCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccC
Confidence 444332211 1123788888888888999999987 8999999999997665 45566666665432111
Q ss_pred hhh---------------------------------------------------hhccc---------------------
Q 026965 151 MAS---------------------------------------------------ILFGR--------------------- 158 (230)
Q Consensus 151 ~~~---------------------------------------------------~~~~~--------------------- 158 (230)
.+. ..+.+
T Consensus 185 s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~ 264 (368)
T COG2021 185 SAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLD 264 (368)
T ss_pred CHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHH
Confidence 000 00000
Q ss_pred ---------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEe-cC
Q 026965 159 ---------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLI-EG 204 (230)
Q Consensus 159 ---------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~ 204 (230)
....+.++++|++++.-+.|.+.|+++.++..+.+.+...++++ ..
T Consensus 265 ~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~ 344 (368)
T COG2021 265 YQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSP 344 (368)
T ss_pred HHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCC
Confidence 00124468999999999999999999988766666544335444 45
Q ss_pred CCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 205 ASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 205 ~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.||. ++.+.+ .+...|..||+.
T Consensus 345 ~GHDaFL~e~~---~~~~~i~~fL~~ 367 (368)
T COG2021 345 YGHDAFLVESE---AVGPLIRKFLAL 367 (368)
T ss_pred CCchhhhcchh---hhhHHHHHHhhc
Confidence 7999 776655 677888899875
No 109
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.59 E-value=2.6e-13 Score=101.20 Aligned_cols=177 Identities=16% Similarity=0.194 Sum_probs=121.4
Q ss_pred ceeEEEECCCCCCCCCchhhHH---HHHHHHhCCCeEEEEeecccccCCCCCCCCC------------cccHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKG---IASGLANKGFKAVTFDMRGVGRSTGKASLTG------------FAEVEDVIAVCK 105 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~------------~~~~~d~~~~~~ 105 (230)
+|++|.+.|- ++..+|.+ ++..|.++|+..+.+..|.||...+...... ...+.+...+++
T Consensus 92 rp~~IhLagT----GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 92 RPVCIHLAGT----GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CceEEEecCC----CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 8899999995 44444433 3788888899999999999998765433211 112778888999
Q ss_pred HHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchh-----------------hhhhhccc----------
Q 026965 106 WVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGM-----------------MASILFGR---------- 158 (230)
Q Consensus 106 ~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~---------- 158 (230)
|+..+ +..++.+.|.||||.+|..++...|+..+++.+-++... ........
T Consensus 168 Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~ 246 (348)
T PF09752_consen 168 WLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIP 246 (348)
T ss_pred HHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccc
Confidence 99888 888999999999999999999887776665544222110 00000000
Q ss_pred -----------------------------ccccccCCC-----CCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecC
Q 026965 159 -----------------------------HHKAILKSP-----KPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEG 204 (230)
Q Consensus 159 -----------------------------~~~~~~~~~-----~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (230)
....+.+.. ..+.++.+++|.+||..... .+++..|++++..++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~-~Lq~~WPGsEvR~l~g 325 (348)
T PF09752_consen 247 AQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVL-SLQEIWPGSEVRYLPG 325 (348)
T ss_pred cCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcc-hHHHhCCCCeEEEecC
Confidence 001111222 34689999999999988777 6888889999999997
Q ss_pred CCcc--cccChhhHHHHHHHHHHHH
Q 026965 205 ASHF--QMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 205 ~~H~--~~~~~~~~~~~~~~i~~fl 227 (230)
||. ++...+ .+.+.|.+-+
T Consensus 326 -GHVsA~L~~q~---~fR~AI~Daf 346 (348)
T PF09752_consen 326 -GHVSAYLLHQE---AFRQAIYDAF 346 (348)
T ss_pred -CcEEEeeechH---HHHHHHHHHh
Confidence 998 444444 5555555544
No 110
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.58 E-value=4.6e-13 Score=98.88 Aligned_cols=176 Identities=23% Similarity=0.356 Sum_probs=112.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCC--CeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKG--FKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILL 118 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 118 (230)
.|+++++||+ .++...|......+.... |+++.+|+||+|.|. .. ..........+..+.+.++..++.+
T Consensus 21 ~~~i~~~hg~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~----~~~~~~~~~~~~~~~~~~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGF---PGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA----GYSLSAYADDLAALLDALGLEKVVL 92 (282)
T ss_pred CCeEEEeCCC---CCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc----cccHHHHHHHHHHHHHHhCCCceEE
Confidence 3489999998 455555665333333321 899999999999998 11 1111222444444456777777999
Q ss_pred EEecchHHHHHHhhhccc-ceEEEEEcCCcch-----------hh----------h-hh-----------h--ccc----
Q 026965 119 VGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFG-----------MM----------A-SI-----------L--FGR---- 158 (230)
Q Consensus 119 ~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~-----------~~----------~-~~-----------~--~~~---- 158 (230)
+|||+||.+++.++...+ .+.++++++.+.. .. . .. . ...
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
T COG0596 93 VGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAA 172 (282)
T ss_pred EEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccccccccccc
Confidence 999999999998887655 4677776653321 00 0 00 0 000
Q ss_pred ----------------------------------------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccC-ce
Q 026965 159 ----------------------------------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAG-RV 197 (230)
Q Consensus 159 ----------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~ 197 (230)
.......+.+|+++++|++|.+.+..... .+.+..+ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~-~~~~~~~~~~ 251 (282)
T COG0596 173 ARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELAR-RLAAALPNDA 251 (282)
T ss_pred chhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHH-HHHhhCCCCc
Confidence 00112235799999999999777765533 3444445 48
Q ss_pred EEEEecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 198 ETHLIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 198 ~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
+++++++++|. ..+.|. .+.+.+.+|+.
T Consensus 252 ~~~~~~~~gH~~~~~~p~---~~~~~i~~~~~ 280 (282)
T COG0596 252 RLVVIPGAGHFPHLEAPE---AFAAALLAFLE 280 (282)
T ss_pred eEEEeCCCCCcchhhcHH---HHHHHHHHHHh
Confidence 99999999999 677776 67777777544
No 111
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.57 E-value=1e-13 Score=94.68 Aligned_cols=172 Identities=23% Similarity=0.244 Sum_probs=116.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
...+|++-|- ++....-..+++.|+++|+.|+.+|-+-+-.+...+... ..|+.++++....+.+.++++|+|
T Consensus 2 Dt~~v~~SGD---gGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~----a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 2 DTLAVFFSGD---GGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQT----AADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred CEEEEEEeCC---CCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHH----HHHHHHHHHHHHHHhCCceEEEEe
Confidence 4578888885 566666778999999999999999977665554444322 689999999999999999999999
Q ss_pred ecchHHHHHHhhhcc-----cceEEEEEcCCcchhh----hhhhcc--------cccccccCCC-CCEEEEecCCCcccC
Q 026965 121 SSAGAPIAGSAVDEI-----EQVVGYVSLGYPFGMM----ASILFG--------RHHKAILKSP-KPKLFVMGTRDGFTS 182 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~-~p~l~i~g~~D~~~~ 182 (230)
+|+|+-+.-.+..+. .++..++++++..... ..-++. .....+.++. .|+++|+|++|.-..
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~~E~d~~ 154 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGEDEDDSL 154 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcCCCCCCc
Confidence 999998777555432 4677777776443211 111111 1122334444 599999998876532
Q ss_pred HHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 183 VKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
... +. .++.+.+.+||+.|+ -++.. .+.+.|.+-++.
T Consensus 155 cp~----l~--~~~~~~i~lpGgHHf-d~dy~---~La~~Il~~l~~ 191 (192)
T PF06057_consen 155 CPS----LR--QPGVEVIALPGGHHF-DGDYD---ALAKRILDALKA 191 (192)
T ss_pred Ccc----cc--CCCcEEEEcCCCcCC-CCCHH---HHHHHHHHHHhc
Confidence 221 11 257899999975444 44433 777777766653
No 112
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.55 E-value=8.9e-14 Score=107.52 Aligned_cols=157 Identities=21% Similarity=0.297 Sum_probs=88.0
Q ss_pred CCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc-cc-----CCCC----C-------C-----CCCc--
Q 026965 39 SSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV-GR-----STGK----A-------S-----LTGF-- 94 (230)
Q Consensus 39 ~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-g~-----s~~~----~-------~-----~~~~-- 94 (230)
++.|+|||-||. +++...|..++..|+++||.|+++|+|.. +- .+.. . . ....
T Consensus 98 ~~~PvvIFSHGl---gg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGL---GGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--T---T--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCC---CcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 458999999997 78889999999999999999999999952 11 0000 0 0 0000
Q ss_pred c------------cHHHHHHHHHHHHh----------------------hCCCCcEEEEEecchHHHHHHhhhcccceEE
Q 026965 95 A------------EVEDVIAVCKWVSE----------------------NLPTNRILLVGSSAGAPIAGSAVDEIEQVVG 140 (230)
Q Consensus 95 ~------------~~~d~~~~~~~l~~----------------------~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~ 140 (230)
. ...++..+++.+.+ +++.++++++|||+||+.++.++.+..+++.
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~ 254 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKA 254 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--E
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcce
Confidence 0 14555556655542 2345689999999999999999988889999
Q ss_pred EEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHh---ccCceEEEEecCCCcc
Q 026965 141 YVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSS---AAGRVETHLIEGASHF 208 (230)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~---~~~~~~~~~~~~~~H~ 208 (230)
.|.+.+...... ......++.|+|+|.++. +.-..... ..++ ..++..++.+.|..|.
T Consensus 255 ~I~LD~W~~Pl~-------~~~~~~i~~P~L~InSe~--f~~~~~~~-~~~~~~~~~~~~~~~ti~gt~H~ 315 (379)
T PF03403_consen 255 GILLDPWMFPLG-------DEIYSKIPQPLLFINSES--FQWWENIF-RMKKVISNNKESRMLTIKGTAHL 315 (379)
T ss_dssp EEEES---TTS--------GGGGGG--S-EEEEEETT--T--HHHHH-HHHTT--TTS-EEEEEETT--GG
T ss_pred EEEeCCcccCCC-------cccccCCCCCEEEEECcc--cCChhhHH-HHHHHhccCCCcEEEEECCCcCC
Confidence 988865543211 122256789999998864 22222222 2222 2356788999999998
No 113
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.55 E-value=3e-13 Score=106.91 Aligned_cols=133 Identities=22% Similarity=0.281 Sum_probs=103.7
Q ss_pred cceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEEC--CCCCCCCCchhhHHHHH---HHHhCCCeEEEEe
Q 026965 4 YSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVH--PYSILGGCQGLLKGIAS---GLANKGFKAVTFD 78 (230)
Q Consensus 4 ~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~h--G~~~~~~~~~~~~~~~~---~l~~~g~~v~~~d 78 (230)
+..+++.++..||.+|+..+|.|++.. + .|+++..+ .+....+.......... .++.+||.|+..|
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g------~---~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qD 87 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAG------P---LPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQD 87 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCC------C---CceeEEeeccccccccccCcchhhcccccceeecCceEEEEec
Confidence 455678899999999999999998652 2 89999988 44211111222233344 6889999999999
Q ss_pred ecccccCCCCCCCCCcccHHHHHHHHHHHHhh-CCCCcEEEEEecchHHHHHHhh-hcccceEEEEEcC
Q 026965 79 MRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN-LPTNRILLVGSSAGAPIAGSAV-DEIEQVVGYVSLG 145 (230)
Q Consensus 79 ~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~-~~~~~~~~~~~~~ 145 (230)
.||.|.|++........+.+|-.+.|+|+.++ .-..+|..+|.|++|...+.+| .++|.+++++...
T Consensus 88 vRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~ 156 (563)
T COG2936 88 VRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTE 156 (563)
T ss_pred ccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccc
Confidence 99999999988776666789999999999886 5568999999999999999665 4678888877754
No 114
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.54 E-value=1.9e-13 Score=102.23 Aligned_cols=202 Identities=18% Similarity=0.157 Sum_probs=124.9
Q ss_pred eeEEeecCC-CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc--c
Q 026965 7 ESCAVETTD-GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV--G 83 (230)
Q Consensus 7 ~~~~~~~~~-g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g 83 (230)
..+++.... +.++...++.|.....+ -+..+.|+|++-||. ++....+..+++.+++.||.|..++++|. |
T Consensus 39 ~~i~~~~~~r~~~~~v~~~~p~~~~~~---~~~~~~PlvvlshG~---Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~ 112 (365)
T COG4188 39 VTITLNDPQRDRERPVDLRLPQGGTGT---VALYLLPLVVLSHGS---GSYVTGFAWLAEHLASYGFVVAAPDHPGSNAG 112 (365)
T ss_pred EEEeccCcccCCccccceeccCCCccc---cccCcCCeEEecCCC---CCCccchhhhHHHHhhCceEEEeccCCCcccc
Confidence 334444332 56788888888654210 122458999999997 67788899999999999999999999984 3
Q ss_pred cCCCCCCC-------CCcccHHHHHHHHHHHHhh---------CCCCcEEEEEecchHHHHHHhhhccc---------ce
Q 026965 84 RSTGKASL-------TGFAEVEDVIAVCKWVSEN---------LPTNRILLVGSSAGAPIAGSAVDEIE---------QV 138 (230)
Q Consensus 84 ~s~~~~~~-------~~~~~~~d~~~~~~~l~~~---------~~~~~i~l~G~S~Gg~~a~~~~~~~~---------~~ 138 (230)
..+..... ..+....|+..+++++.+. ++..+|.++|||+||+.++.++.-.. ..
T Consensus 113 ~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~ 192 (365)
T COG4188 113 GAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCES 192 (365)
T ss_pred cCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhh
Confidence 33221111 1223367888888777654 46789999999999999997763211 10
Q ss_pred EEEEEcCCc-------------chhhhhhhccc-----------------ccccccCCCCCEEEEecCCCcccCHHHHHH
Q 026965 139 VGYVSLGYP-------------FGMMASILFGR-----------------HHKAILKSPKPKLFVMGTRDGFTSVKQLQN 188 (230)
Q Consensus 139 ~~~~~~~~~-------------~~~~~~~~~~~-----------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 188 (230)
...+....+ ......+.+.+ -...+.+++.|++++.|..|.+.|+..-..
T Consensus 193 ~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~ 272 (365)
T COG4188 193 ASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQI 272 (365)
T ss_pred hhhcccCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccc
Confidence 000001000 00000000000 123455789999999999999877654222
Q ss_pred -HHHhcc-CceEEEEecCCCcc-cccChh
Q 026965 189 -KLSSAA-GRVETHLIEGASHF-QMEGPA 214 (230)
Q Consensus 189 -~~~~~~-~~~~~~~~~~~~H~-~~~~~~ 214 (230)
-+..+. ....+..++++.|+ +++...
T Consensus 273 ~~f~~l~g~~k~~~~vp~a~h~sfl~~~~ 301 (365)
T COG4188 273 RPFGYLPGALKYLRLVPGATHFSFLELCK 301 (365)
T ss_pred cccccCCcchhheeecCCCccccccccCc
Confidence 222222 23568889999999 665443
No 115
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.53 E-value=5e-14 Score=83.98 Aligned_cols=63 Identities=35% Similarity=0.607 Sum_probs=55.4
Q ss_pred CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCC
Q 026965 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASL 91 (230)
Q Consensus 16 g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~ 91 (230)
|.+|.++.|.|+++. +.+|+++||+ +.....|..+++.|+++||.|+++|+||||.|++....
T Consensus 1 G~~L~~~~w~p~~~~----------k~~v~i~HG~---~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPENPP----------KAVVVIVHGF---GEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH 63 (79)
T ss_pred CcEEEEEEecCCCCC----------CEEEEEeCCc---HHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc
Confidence 568999999998642 7899999998 78888999999999999999999999999999965443
No 116
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.53 E-value=1.4e-13 Score=101.10 Aligned_cols=182 Identities=19% Similarity=0.236 Sum_probs=76.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec----ccccCCCCCCCCCcccHHHHHHHHHHHHhh----CC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR----GVGRSTGKASLTGFAEVEDVIAVCKWVSEN----LP 112 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~----g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~----~~ 112 (230)
..+|||+.|.+.--.+..+...+++.|.+.||.++-+.++ |+|.++-. .+++|+.+++++++.. .+
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~------~D~~eI~~~v~ylr~~~~g~~~ 106 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD------RDVEEIAQLVEYLRSEKGGHFG 106 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH------HHHHHHHHHHHHHHHHS-----
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh------hHHHHHHHHHHHHHHhhccccC
Confidence 6789999998633334566778999998889999999865 34433311 1279999999999887 36
Q ss_pred CCcEEEEEecchHHHHHHhhhcc------cceEEEEEcCCcchhh------------hhh----------------h---
Q 026965 113 TNRILLVGSSAGAPIAGSAVDEI------EQVVGYVSLGYPFGMM------------ASI----------------L--- 155 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~~~~------~~~~~~~~~~~~~~~~------------~~~----------------~--- 155 (230)
.++|+|+|||-|..-++.++... +.+.++|+-++..+.. ... +
T Consensus 107 ~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~ 186 (303)
T PF08538_consen 107 REKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPRE 186 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG---
T ss_pred CccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeecc
Confidence 78999999999999999887543 5688888754322110 000 0
Q ss_pred -----c-c----------------------------cccccccCCCCCEEEEecCCCcccCHHHH----HHHHHhccCc-
Q 026965 156 -----F-G----------------------------RHHKAILKSPKPKLFVMGTRDGFTSVKQL----QNKLSSAAGR- 196 (230)
Q Consensus 156 -----~-~----------------------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~----~~~~~~~~~~- 196 (230)
+ . .....+..++.|+|++.+++|+.||...- .+.++++.+.
T Consensus 187 ~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~ 266 (303)
T PF08538_consen 187 FTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPK 266 (303)
T ss_dssp -GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------------------
T ss_pred ccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccccc
Confidence 0 0 00022335788999999999999986432 1223332221
Q ss_pred ---eEEEEecCCCcccccCh--hhHHHHHHHHHHHHh
Q 026965 197 ---VETHLIEGASHFQMEGP--AYDAQMVNLILDFIA 228 (230)
Q Consensus 197 ---~~~~~~~~~~H~~~~~~--~~~~~~~~~i~~fl~ 228 (230)
..--++||++|..-+.. +..+.+.+.+..||+
T Consensus 267 ~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 267 IWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccCC
Confidence 23458999999943322 234577888888874
No 117
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.52 E-value=1.1e-12 Score=95.63 Aligned_cols=175 Identities=17% Similarity=0.249 Sum_probs=113.2
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHH-HHHHHHHHhhCCCCcEEEEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDV-IAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~-~~~~~~l~~~~~~~~i~l~G 120 (230)
++|+++|++ +++...|..+++.+....+.|+.++++|.+... +... .++++ ...++.++...+..++.|+|
T Consensus 1 ~~lf~~p~~---gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~--~~~~---si~~la~~y~~~I~~~~~~gp~~L~G 72 (229)
T PF00975_consen 1 RPLFCFPPA---GGSASSYRPLARALPDDVIGVYGIEYPGRGDDE--PPPD---SIEELASRYAEAIRARQPEGPYVLAG 72 (229)
T ss_dssp -EEEEESST---TCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS--HEES---SHHHHHHHHHHHHHHHTSSSSEEEEE
T ss_pred CeEEEEcCC---ccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC--CCCC---CHHHHHHHHHHHhhhhCCCCCeeehc
Confidence 469999998 678899999999998865889999999886221 1111 13333 33556666666667999999
Q ss_pred ecchHHHHHHhhhcc----cceEEEEEcCCcchhhhh------hhcc------------------c-------------c
Q 026965 121 SSAGAPIAGSAVDEI----EQVVGYVSLGYPFGMMAS------ILFG------------------R-------------H 159 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~----~~~~~~~~~~~~~~~~~~------~~~~------------------~-------------~ 159 (230)
||+||.+|+.+|++. ..+..++++..+...... .... . .
T Consensus 73 ~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (229)
T PF00975_consen 73 WSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDD 152 (229)
T ss_dssp ETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHH
Confidence 999999999888643 446777777754332100 0000 0 0
Q ss_pred c-----ccccCC---CCCEEEEecCCCcccCHH--HHHH-HHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHH
Q 026965 160 H-----KAILKS---PKPKLFVMGTRDGFTSVK--QLQN-KLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 160 ~-----~~~~~~---~~p~l~i~g~~D~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl 227 (230)
. ...... .+|..+.....|+..... .... +.+....+++++.++| +|+ ++. +...++.+.|.++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~--~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 153 FQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLK--PHVAEIAEKIAEWL 229 (229)
T ss_dssp HHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHS--TTHHHHHHHHHHHH
T ss_pred HHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecc--hHHHHHHHHHhccC
Confidence 0 001111 346888888888887766 2222 3333445688999995 999 555 33458888888876
No 118
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.51 E-value=3.3e-13 Score=105.09 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=75.0
Q ss_pred CCceeEEEECCCCCCCCCchhhHH-HHHHHHh--CCCeEEEEeecccccCCCCCCCCCc-ccHHHHHHHHHHHHhh--CC
Q 026965 39 SSSLAIVLVHPYSILGGCQGLLKG-IASGLAN--KGFKAVTFDMRGVGRSTGKASLTGF-AEVEDVIAVCKWVSEN--LP 112 (230)
Q Consensus 39 ~~~~~vi~~hG~~~~~~~~~~~~~-~~~~l~~--~g~~v~~~d~~g~g~s~~~~~~~~~-~~~~d~~~~~~~l~~~--~~ 112 (230)
...|++|++||++.. +....|.. +.+.|.. ..++|+++|++|+|.+......... ...+++.++++++.+. ++
T Consensus 39 ~~~ptvIlIHG~~~s-~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 39 HETKTFIVIHGWTVT-GMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCeEEEECCCCcC-CcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 347899999999521 22234554 6665542 2599999999999987644322111 1135677778777654 45
Q ss_pred CCcEEEEEecchHHHHHHhhhccc-ceEEEEEcCCc
Q 026965 113 TNRILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYP 147 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~ 147 (230)
.++++|+||||||.+|..++...+ ++.+++.+.+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 789999999999999998887654 67778887654
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.50 E-value=2e-12 Score=94.21 Aligned_cols=179 Identities=18% Similarity=0.296 Sum_probs=110.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHH-hCCCe--EEEEe--eccc----ccCCC---CCC-----CCCc-----ccHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLA-NKGFK--AVTFD--MRGV----GRSTG---KAS-----LTGF-----AEVE 98 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~-~~g~~--v~~~d--~~g~----g~s~~---~~~-----~~~~-----~~~~ 98 (230)
..+.||+||+ +++...+..+...+. +.|.. ++.++ .-|. |.-.. .+- .... ....
T Consensus 11 ~tPTifihG~---~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 11 TTPTIFIHGY---GGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -EEEEEE--T---TGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCcEEEECCC---CCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 6789999998 688888999999997 66543 44333 2231 22111 110 0011 1155
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc------ccceEEEEEcCCcchhhhhhhcc---------------
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE------IEQVVGYVSLGYPFGMMASILFG--------------- 157 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------------- 157 (230)
-+..++.+|.++++.+++-++||||||..++.++.. .|.+..+|.++.|+.........
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~ 167 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMT 167 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccC
Confidence 677788888899999999999999999999977643 47899999999998765322111
Q ss_pred -------cccccccCCCCCEEEEecC------CCcccCHHHHHHHHHhcc----CceEEEEecC--CCcc-cccChhhHH
Q 026965 158 -------RHHKAILKSPKPKLFVMGT------RDGFTSVKQLQNKLSSAA----GRVETHLIEG--ASHF-QMEGPAYDA 217 (230)
Q Consensus 158 -------~~~~~~~~~~~p~l~i~g~------~D~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~H~-~~~~~~~~~ 217 (230)
.....-..-.+.+|-|.|. .|..||...+.. ++.+. ...+-.++.| +.|. ..+++
T Consensus 168 ~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~s-l~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~---- 242 (255)
T PF06028_consen 168 PMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLS-LRYLLKNRAKSYQEKTVTGKDAQHSQLHENP---- 242 (255)
T ss_dssp HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCT-HHHHCTTTSSEEEEEEEESGGGSCCGGGCCH----
T ss_pred HHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHH-HHHHhhcccCceEEEEEECCCCccccCCCCH----
Confidence 0101111235789999998 788999887663 33332 3456666765 6899 55554
Q ss_pred HHHHHHHHHH
Q 026965 218 QMVNLILDFI 227 (230)
Q Consensus 218 ~~~~~i~~fl 227 (230)
++.+.|.+||
T Consensus 243 ~V~~~I~~FL 252 (255)
T PF06028_consen 243 QVDKLIIQFL 252 (255)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7888888887
No 120
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.50 E-value=6.4e-13 Score=104.27 Aligned_cols=199 Identities=17% Similarity=0.149 Sum_probs=141.5
Q ss_pred CccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 2 SSYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 2 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
+++..++...++.||++|+|.+.+ ++. +.+ +.|++|+-.|+.... -...|......+.++|...+..+.||
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~-K~~------~~d-~~pTll~aYGGF~vs-ltP~fs~~~~~WLerGg~~v~ANIRG 460 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVR-KGA------KKD-ENPTLLYAYGGFNIS-LTPRFSGSRKLWLERGGVFVLANIRG 460 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEe-cCC------cCC-CCceEEEeccccccc-cCCccchhhHHHHhcCCeEEEEeccc
Confidence 357788888999999999999997 543 122 488998888864322 23445555588889999999999999
Q ss_pred cccCCCCCCCCC-----cccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhh
Q 026965 82 VGRSTGKASLTG-----FAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI 154 (230)
Q Consensus 82 ~g~s~~~~~~~~-----~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
-|+-........ ....+|+.++.+.|..+ -..+++.+.|-|-||.+...++.+.|++.+++++..|...+.++
T Consensus 461 GGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRY 540 (648)
T COG1505 461 GGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRY 540 (648)
T ss_pred CCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhh
Confidence 776543222111 11268999999988776 24578999999999999999999999999999988776554332
Q ss_pred hc----------------------ccccccccCCC-----CCEEEEecCCCcccCHHHHHHHHHhcc---CceEEEEecC
Q 026965 155 LF----------------------GRHHKAILKSP-----KPKLFVMGTRDGFTSVKQLQNKLSSAA---GRVETHLIEG 204 (230)
Q Consensus 155 ~~----------------------~~~~~~~~~~~-----~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~ 204 (230)
-. -..+....+++ .|+||-.+.+|.-|.|.+++++..++. .++-+.+-.+
T Consensus 541 h~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~ 620 (648)
T COG1505 541 HLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETK 620 (648)
T ss_pred cccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecC
Confidence 11 01112222222 489999999999999999987666553 4455555567
Q ss_pred CCccc
Q 026965 205 ASHFQ 209 (230)
Q Consensus 205 ~~H~~ 209 (230)
+||.-
T Consensus 621 gGH~g 625 (648)
T COG1505 621 GGHGG 625 (648)
T ss_pred CcccC
Confidence 89983
No 121
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.49 E-value=3.3e-12 Score=98.58 Aligned_cols=181 Identities=21% Similarity=0.213 Sum_probs=120.7
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS 121 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~ 121 (230)
|+|+++... .+......+.+.+.|.+ |+.|+..|+..-+..+......+ .+|....+....+.++.+ +.++|+
T Consensus 103 ~pvLiV~Pl--~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~---ldDYi~~l~~~i~~~G~~-v~l~Gv 175 (406)
T TIGR01849 103 PAVLIVAPM--SGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFD---LEDYIDYLIEFIRFLGPD-IHVIAV 175 (406)
T ss_pred CcEEEEcCC--chHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCC---HHHHHHHHHHHHHHhCCC-CcEEEE
Confidence 678888876 22223334678899999 99999999975553322222222 244334443333555666 999999
Q ss_pred cchHHHHHHhhhc------ccceEEEEEcCCcchhhhh---------------h---h----------ccc---------
Q 026965 122 SAGAPIAGSAVDE------IEQVVGYVSLGYPFGMMAS---------------I---L----------FGR--------- 158 (230)
Q Consensus 122 S~Gg~~a~~~~~~------~~~~~~~~~~~~~~~~~~~---------------~---~----------~~~--------- 158 (230)
|+||..++.++.. +..++.++++++|.+.... . . ..+
T Consensus 176 CqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 176 CQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred chhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 9999997744432 2358888888776543211 0 0 000
Q ss_pred -------------------------------------------------------------------------ccccccC
Q 026965 159 -------------------------------------------------------------------------HHKAILK 165 (230)
Q Consensus 159 -------------------------------------------------------------------------~~~~~~~ 165 (230)
..-.+.+
T Consensus 256 ~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~ 335 (406)
T TIGR01849 256 AGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGA 335 (406)
T ss_pred HHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHH
Confidence 0001225
Q ss_pred CC-CCEEEEecCCCcccCHHHHHHHHHhc---c-CceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 166 SP-KPKLFVMGTRDGFTSVKQLQNKLSSA---A-GRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 166 ~~-~p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|+ +|+|.+.|++|.++++.++....... . .+++.++.+++||. .+......++++..|.+||.+
T Consensus 336 I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 336 ITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred CcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 78 99999999999999999988655542 2 35667788789999 777777888999999999975
No 122
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.48 E-value=1.6e-13 Score=102.17 Aligned_cols=107 Identities=12% Similarity=0.183 Sum_probs=71.6
Q ss_pred ceeEEEECCCCCCCCCchhh-HHHHHHHH-hCCCeEEEEeecccccCCCCCCCCCc-ccHHHHHHHHHHHHhh--CCCCc
Q 026965 41 SLAIVLVHPYSILGGCQGLL-KGIASGLA-NKGFKAVTFDMRGVGRSTGKASLTGF-AEVEDVIAVCKWVSEN--LPTNR 115 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~-~~~~~~l~-~~g~~v~~~d~~g~g~s~~~~~~~~~-~~~~d~~~~~~~l~~~--~~~~~ 115 (230)
.|++|++||++ +.....| ..+.+.+. ..+++|+++|+++++........... ...+++..+++.+.+. ++.++
T Consensus 36 ~p~vilIHG~~--~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 36 RPTRFIIHGWT--SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCcEEEEcCCC--CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 78999999995 2222344 34555444 45799999999987322111100011 1135677788887765 45689
Q ss_pred EEEEEecchHHHHHHhhhccc-ceEEEEEcCCcch
Q 026965 116 ILLVGSSAGAPIAGSAVDEIE-QVVGYVSLGYPFG 149 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~~~~-~~~~~~~~~~~~~ 149 (230)
++++|||+||.++..++.+.+ ++.+++.+.+...
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 999999999999998887654 6888888865543
No 123
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.47 E-value=4.4e-13 Score=96.68 Aligned_cols=158 Identities=13% Similarity=0.120 Sum_probs=94.6
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCc-eeEEEECCCCCCCCCchhhHHHH-------HHHHhCCCeEEEEeecc-ccc
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSS-LAIVLVHPYSILGGCQGLLKGIA-------SGLANKGFKAVTFDMRG-VGR 84 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~-~~vi~~hG~~~~~~~~~~~~~~~-------~~l~~~g~~v~~~d~~g-~g~ 84 (230)
..|.+|.|++|.|++- .++.+. |.|||+||.+..+.+ ....+. -...+.+|-|++|.+-- +..
T Consensus 169 ~tgneLkYrly~Pkdy------~pdkky~PLvlfLHgagq~g~d--n~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 169 STGNELKYRLYTPKDY------APDKKYYPLVLFLHGAGQGGSD--NDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred ccCceeeEEEeccccc------CCCCccccEEEEEecCCCCCch--hhhhhhcCccceeeecccCceEEEcccccccccc
Confidence 4678999999999775 233335 999999998743322 222222 22223456677776421 111
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEE-EEcCCcchhhhhhhcccccc
Q 026965 85 STGKASLTGFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGY-VSLGYPFGMMASILFGRHHK 161 (230)
Q Consensus 85 s~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 161 (230)
++... .....+-+..+.+.+.++ ++.+||+++|.|+||..++.++.+.|++.+. +.++...... ...+
T Consensus 241 ~e~~t---~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v------~lv~ 311 (387)
T COG4099 241 SEEKT---LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRV------YLVR 311 (387)
T ss_pred ccccc---chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchh------hhhh
Confidence 11100 011122222233355555 4668999999999999999888877766544 4554433310 0111
Q ss_pred cccCCCCCEEEEecCCCcccCHHHHHHHH
Q 026965 162 AILKSPKPKLFVMGTRDGFTSVKQLQNKL 190 (230)
Q Consensus 162 ~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 190 (230)
.+ -+.|+.++|+.+|+++|.+.++-.+
T Consensus 312 ~l--k~~piWvfhs~dDkv~Pv~nSrv~y 338 (387)
T COG4099 312 TL--KKAPIWVFHSSDDKVIPVSNSRVLY 338 (387)
T ss_pred hh--ccCceEEEEecCCCccccCcceeeh
Confidence 12 2679999999999999988765333
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.47 E-value=2.9e-13 Score=97.11 Aligned_cols=162 Identities=15% Similarity=0.044 Sum_probs=78.6
Q ss_pred ceeEEEECCCCCCCCCchhhH----HHHHHHHhCCCeEEEEeecccc-----cCC-------------CCCCCCCc----
Q 026965 41 SLAIVLVHPYSILGGCQGLLK----GIASGLANKGFKAVTFDMRGVG-----RST-------------GKASLTGF---- 94 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~g~g-----~s~-------------~~~~~~~~---- 94 (230)
++-|+++||+ +.+...+. .+.+.|.+.++.++.+|-|--- ... ....+...
T Consensus 4 k~riLcLHG~---~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 4 KPRILCLHGY---GQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp --EEEEE--T---T--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CceEEEeCCC---CcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 6789999998 56666555 4555665536899988865321 110 00011111
Q ss_pred ccHHHHHHHHHHHHhhCCC-C-cEEEEEecchHHHHHHhhhc---------ccceEEEEEcCCcchhhhhhhcccccccc
Q 026965 95 AEVEDVIAVCKWVSENLPT-N-RILLVGSSAGAPIAGSAVDE---------IEQVVGYVSLGYPFGMMASILFGRHHKAI 163 (230)
Q Consensus 95 ~~~~d~~~~~~~l~~~~~~-~-~i~l~G~S~Gg~~a~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
....++.+.++++.+.+.. . =..|+|+|+||.+|..++.. .+.++.+|++++........ .... ..
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~--~~~~-~~ 157 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDY--QELY-DE 157 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-G--TTTT---
T ss_pred ccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhh--hhhh-cc
Confidence 1134455555555443211 2 35799999999999966632 24466677766544332211 1111 34
Q ss_pred cCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCccc
Q 026965 164 LKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQ 209 (230)
Q Consensus 164 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 209 (230)
..+++|+|.++|++|.+++++.++.+.+...++.+++..+ +||.+
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~v 202 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHV 202 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS-
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcC
Confidence 5679999999999999999888875555544337777777 58873
No 125
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.46 E-value=4.9e-13 Score=110.40 Aligned_cols=91 Identities=15% Similarity=0.198 Sum_probs=69.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCC----------CCCC--------------ccc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKA----------SLTG--------------FAE 96 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~----------~~~~--------------~~~ 96 (230)
.|+||++||+ +++...|..+++.|+++||.|+++|+||||.+.... .... .+.
T Consensus 449 ~P~VVllHG~---~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 449 WPVVIYQHGI---TGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CcEEEEeCCC---CCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 6799999998 678888999999999999999999999999994431 1110 111
Q ss_pred HHHHHHHHHHHH------hh------CCCCcEEEEEecchHHHHHHhhhc
Q 026965 97 VEDVIAVCKWVS------EN------LPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 97 ~~d~~~~~~~l~------~~------~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
+.|+..+...+. .. ++..+++++||||||.++..++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 566666666665 22 456799999999999999977754
No 126
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=1.6e-11 Score=82.28 Aligned_cols=130 Identities=16% Similarity=0.142 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhhh----hhhcccccccccCCCCCEE
Q 026965 97 VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMMA----SILFGRHHKAILKSPKPKL 171 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~l 171 (230)
.+|..+.++...... .++++|++||+|+..++.++.+. ..+.++++++++....+ .....-.........-|.+
T Consensus 43 ~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~ 121 (181)
T COG3545 43 LDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSV 121 (181)
T ss_pred HHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCcee
Confidence 455555554433433 45699999999999999887643 57889988887764332 2222222334445667999
Q ss_pred EEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccc-cChhhHHHHHHHHHHHHhh
Q 026965 172 FVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQM-EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 172 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~~i~~fl~~ 229 (230)
++.+.+|++++++.++.+.+.. ...++.+..+||... ..-....+....+.+|+.+
T Consensus 122 vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 122 VVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred EEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 9999999999999999766666 467778888899732 2222344677777777654
No 127
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.44 E-value=5.2e-12 Score=91.81 Aligned_cols=159 Identities=17% Similarity=0.232 Sum_probs=106.0
Q ss_pred CCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCC---------CCC-------------CCCc
Q 026965 37 NDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTG---------KAS-------------LTGF 94 (230)
Q Consensus 37 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~---------~~~-------------~~~~ 94 (230)
+.++.|++||.||. +++...|..+.-.|+++||.|.++++|.+-.... .+. ....
T Consensus 114 k~~k~PvvvFSHGL---ggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef 190 (399)
T KOG3847|consen 114 KNDKYPVVVFSHGL---GGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEF 190 (399)
T ss_pred CCCCccEEEEeccc---ccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeE
Confidence 35669999999996 7899999999999999999999999986532210 000 0000
Q ss_pred --------ccHHHHHHHHHHHHh-----------------------hCCCCcEEEEEecchHHHHHHhhhcccceEEEEE
Q 026965 95 --------AEVEDVIAVCKWVSE-----------------------NLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVS 143 (230)
Q Consensus 95 --------~~~~d~~~~~~~l~~-----------------------~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 143 (230)
..+.++..+++.+.+ .++..++.++|||+||+.++.......+++..|.
T Consensus 191 ~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~ 270 (399)
T KOG3847|consen 191 HIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIA 270 (399)
T ss_pred EeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeee
Confidence 014444455444432 2344578999999999999988887778888877
Q ss_pred cCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhc---cCceEEEEecCCCcc
Q 026965 144 LGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSA---AGRVETHLIEGASHF 208 (230)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~H~ 208 (230)
+.. +++.-......+.+-|+++|.-+ |... .+... ..++. .....++++.|+-|.
T Consensus 271 lD~-------WM~Pl~~~~~~~arqP~~finv~-~fQ~-~en~~-vmKki~~~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 271 LDA-------WMFPLDQLQYSQARQPTLFINVE-DFQW-NENLL-VMKKIESQNEGNHVITLDGSVHQ 328 (399)
T ss_pred eee-------eecccchhhhhhccCCeEEEEcc-cccc-hhHHH-HHHhhhCCCccceEEEEccceec
Confidence 642 33333445566778999999953 3222 23322 23333 234578889999997
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.40 E-value=6.1e-11 Score=82.43 Aligned_cols=178 Identities=15% Similarity=0.116 Sum_probs=104.4
Q ss_pred ceeEEEECCCCCCCCCchhh----HHHHHHHHhCCCeEEEEeeccc----ccC--CC------CC----CCCCcc-----
Q 026965 41 SLAIVLVHPYSILGGCQGLL----KGIASGLANKGFKAVTFDMRGV----GRS--TG------KA----SLTGFA----- 95 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g~----g~s--~~------~~----~~~~~~----- 95 (230)
.+-|+|+||+- .+...+ ..+.+.+.+. +..+.+|-|-- +.+ .+ +. +...+.
T Consensus 5 k~rvLcLHGfr---Qsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 5 KLRVLCLHGFR---QSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CceEEEecchh---hccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc
Confidence 67799999994 343333 3466677776 77888877620 111 00 00 000110
Q ss_pred ---c----HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh---------cccceEEEEEcCCcchhhhhhhcccc
Q 026965 96 ---E----VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD---------EIEQVVGYVSLGYPFGMMASILFGRH 159 (230)
Q Consensus 96 ---~----~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
. -+.+..+.+++.++-+.+ .|+|+|+|+.++..++. ..|.++-+|+++.-.... . ....
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~-~--~~~~ 155 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS-K--KLDE 155 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc-c--hhhh
Confidence 0 122444444454443332 69999999999997765 124556666664322211 0 0111
Q ss_pred cccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 160 HKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 160 ~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
......+++|+|.|.|+.|.++|...+..+++.. ++..++.-| +||..-....+.+.+.+.|..++++
T Consensus 156 ~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 156 SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred hhhccCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecC-CCccCCCchHHHHHHHHHHHHHHHh
Confidence 1223467899999999999999998888655554 455655566 6999544445556777777766653
No 129
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.39 E-value=3.5e-11 Score=89.16 Aligned_cols=102 Identities=21% Similarity=0.256 Sum_probs=74.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC---CCeEEEEeecccccCCCCC----CCCCcccHHHHHHHHHHHHhh---
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK---GFKAVTFDMRGVGRSTGKA----SLTGFAEVEDVIAVCKWVSEN--- 110 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~g~s~~~~----~~~~~~~~~d~~~~~~~l~~~--- 110 (230)
+..+++++|. .+-..+|..+.+.|.+. .+.|+++.+.||-.++... ....+...+.+...++.+.+.
T Consensus 2 ~~li~~IPGN---PGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGN---PGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCC---CChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 6789999997 68888999998888754 7999999999997666542 112222234444444444443
Q ss_pred C--CCCcEEEEEecchHHHHHHhhhccc----ceEEEEEcC
Q 026965 111 L--PTNRILLVGSSAGAPIAGSAVDEIE----QVVGYVSLG 145 (230)
Q Consensus 111 ~--~~~~i~l~G~S~Gg~~a~~~~~~~~----~~~~~~~~~ 145 (230)
. +..+++++|||.|+++++.++.+.+ ++..++++.
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLf 119 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLF 119 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeC
Confidence 2 4678999999999999999998766 677777664
No 130
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=4.2e-12 Score=91.92 Aligned_cols=123 Identities=19% Similarity=0.224 Sum_probs=83.1
Q ss_pred EEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHH---HHHHHhCCCeEEEEee-ccc--
Q 026965 9 CAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGI---ASGLANKGFKAVTFDM-RGV-- 82 (230)
Q Consensus 9 ~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~---~~~l~~~g~~v~~~d~-~g~-- 82 (230)
.++. .+|.+..|++|.|.... .+.|+||++||.+ ++...+... -+.....||-|+.||- +++
T Consensus 38 ~s~~-~~g~~r~y~l~vP~g~~--------~~apLvv~LHG~~---~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn 105 (312)
T COG3509 38 ASFD-VNGLKRSYRLYVPPGLP--------SGAPLVVVLHGSG---GSGAGQLHGTGWDALADREGFLVAYPDGYDRAWN 105 (312)
T ss_pred cccc-cCCCccceEEEcCCCCC--------CCCCEEEEEecCC---CChHHhhcccchhhhhcccCcEEECcCccccccC
Confidence 3444 57788999999998753 1258999999974 444444433 3344456999999953 221
Q ss_pred ----ccCCCCC-CCCCcccHHHHHHHHHHHHhhCC--CCcEEEEEecchHHHHHHhhhcccceEEEEE
Q 026965 83 ----GRSTGKA-SLTGFAEVEDVIAVCKWVSENLP--TNRILLVGSSAGAPIAGSAVDEIEQVVGYVS 143 (230)
Q Consensus 83 ----g~s~~~~-~~~~~~~~~d~~~~~~~l~~~~~--~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 143 (230)
+.+..+. ...+..++..+.+++..+..+++ ..+|++.|.|-||.++..++...+.+.+.+.
T Consensus 106 ~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A 173 (312)
T COG3509 106 ANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIA 173 (312)
T ss_pred CCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccccccee
Confidence 2221111 13344457778888888888754 5599999999999999998888776655443
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.36 E-value=6.2e-11 Score=81.78 Aligned_cols=177 Identities=19% Similarity=0.140 Sum_probs=103.3
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCC--------CCC-------CCCCcccHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST--------GKA-------SLTGFAEVEDVIAVCK 105 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~--------~~~-------~~~~~~~~~d~~~~~~ 105 (230)
..+||++||- +.+...|.++.+.+.-.+...++|..|-.-.+. +-+ ..............+.
T Consensus 3 ~atIi~LHgl---GDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGL---GDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecC---CCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 4579999997 666677777887777777788888554321111 000 0000001222223333
Q ss_pred HHHhh-----CCCCcEEEEEecchHHHHHHhhhcccc-eEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCc
Q 026965 106 WVSEN-----LPTNRILLVGSSAGAPIAGSAVDEIEQ-VVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDG 179 (230)
Q Consensus 106 ~l~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~ 179 (230)
.+.++ .+..+|.+-|+|+||.+++..+...+. +.+..... ++.......+....... + ..|++..||+.|+
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s-~~~p~~~~~~~~~~~~~-~-~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS-GFLPRASIGLPGWLPGV-N-YTPILLCHGTADP 156 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccc-cccccchhhccCCcccc-C-cchhheecccCCc
Confidence 33222 567899999999999999988765533 33333322 22111111111111111 1 6899999999999
Q ss_pred ccCHHHH---HHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 180 FTSVKQL---QNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 180 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+||.... .+.++.....+++..++|.+|.... +-.+.+..|+.+
T Consensus 157 ~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~------~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 157 LVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP------QELDDLKSWIKT 203 (206)
T ss_pred eeehHHHHHHHHHHHHcCCceeeeecCCccccccH------HHHHHHHHHHHH
Confidence 9997653 3455666666999999999998321 224455566543
No 132
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.35 E-value=3.7e-10 Score=83.77 Aligned_cols=207 Identities=21% Similarity=0.260 Sum_probs=124.1
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh-------HHHHHHHHhCCCeEEEE
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL-------KGIASGLANKGFKAVTF 77 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-------~~~~~~l~~~g~~v~~~ 77 (230)
..+++.++. |+..|......-++. ++ .+.|+++-|.+ +..+.. ..+.+...+.|.+|+.+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a------~~---~RWiL~s~GNg---~~~E~~~~~~~~~~~~~~~ak~~~aNvl~f 177 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA------KP---QRWILVSNGNG---ECYENRAMLDYKDDWIQRFAKELGANVLVF 177 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC------CC---CcEEEEEcCCh---HHhhhhhhhccccHHHHHHHHHcCCcEEEE
Confidence 456677774 887777766553222 12 78899999974 333331 23344444558999999
Q ss_pred eecccccCCCCCCCCCcccHHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhhhcc-----cceEEEEEcCCcch
Q 026965 78 DMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAVDEI-----EQVVGYVSLGYPFG 149 (230)
Q Consensus 78 d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~~~~~~~~ 149 (230)
+|||.|.|.+.... ...+.|..+.+++++++ .+.++|++.|||+||.++..++.+. +.+.-+++-.-.+.
T Consensus 178 NYpGVg~S~G~~s~--~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfs 255 (365)
T PF05677_consen 178 NYPGVGSSTGPPSR--KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFS 255 (365)
T ss_pred CCCccccCCCCCCH--HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcc
Confidence 99999999988864 33478999999999874 3568999999999999999877653 22333333322222
Q ss_pred hhhh---hh-----------c---ccccccccCCCCCEEEEecCC-------CcccCHHHHH--HHHHh-----ccCceE
Q 026965 150 MMAS---IL-----------F---GRHHKAILKSPKPKLFVMGTR-------DGFTSVKQLQ--NKLSS-----AAGRVE 198 (230)
Q Consensus 150 ~~~~---~~-----------~---~~~~~~~~~~~~p~l~i~g~~-------D~~~~~~~~~--~~~~~-----~~~~~~ 198 (230)
.... .+ . -+......++++|-+++++.+ |..++++.+. .+.+. ...++.
T Consensus 256 sl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~lA~~~l~~~~~~~~~~~Ki 335 (365)
T PF05677_consen 256 SLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENCLAAAFLDPPTAEKLSGKKI 335 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcchhhHHHhcCCcccccccccce
Confidence 1111 11 1 112234456789999999875 3334443322 11111 111334
Q ss_pred EEEecCCCcc-cccChhhHHHHHHHHHHHH
Q 026965 199 THLIEGASHF-QMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 199 ~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl 227 (230)
.+.-..-.|. .+.++ ....++..|.+.+
T Consensus 336 ~i~~~~l~H~~~L~~~-~~~~la~~I~~~~ 364 (365)
T PF05677_consen 336 PIGERLLLHNEPLDDE-TIQALAEHILDHF 364 (365)
T ss_pred ecccccccccccCChH-HHHHHHHHHHhhc
Confidence 4444456777 55443 3346666666654
No 133
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.34 E-value=1.8e-11 Score=92.91 Aligned_cols=166 Identities=14% Similarity=0.147 Sum_probs=113.2
Q ss_pred ceeEEEECCCCCC--CCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEE
Q 026965 41 SLAIVLVHPYSIL--GGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILL 118 (230)
Q Consensus 41 ~~~vi~~hG~~~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l 118 (230)
.++++++|.+-.. --+...-..+...+.++|..|+.+++++-..+........+. .+.+...++.+++..+.++|.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi-~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYI-LEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHH-HHHHHHHHHHHHHHhCccccce
Confidence 5678889886200 001122357899999999999999998655554422222221 3777888888888888899999
Q ss_pred EEecchHHHHHHhhhcc-c-ceEEEEEcCCcchhhhhhhcc---------------------------------------
Q 026965 119 VGSSAGAPIAGSAVDEI-E-QVVGYVSLGYPFGMMASILFG--------------------------------------- 157 (230)
Q Consensus 119 ~G~S~Gg~~a~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 157 (230)
+|+|.||.++..++... . +++.++.+.++.++.......
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999988665432 3 477777776665442110000
Q ss_pred -----------c--------------------------------------------ccccccCCCCCEEEEecCCCcccC
Q 026965 158 -----------R--------------------------------------------HHKAILKSPKPKLFVMGTRDGFTS 182 (230)
Q Consensus 158 -----------~--------------------------------------------~~~~~~~~~~p~l~i~g~~D~~~~ 182 (230)
+ ..-.+.+++||++++.++.|.++|
T Consensus 266 w~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~DhI~P 345 (445)
T COG3243 266 WNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDHIAP 345 (445)
T ss_pred hHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccccCC
Confidence 0 001233689999999999999999
Q ss_pred HHHHHHHHHhccCceEEEEecCCCcc
Q 026965 183 VKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
++.+....+....+++++..+ +||.
T Consensus 346 ~~Sv~~g~~l~~g~~~f~l~~-sGHI 370 (445)
T COG3243 346 WSSVYLGARLLGGEVTFVLSR-SGHI 370 (445)
T ss_pred HHHHHHHHHhcCCceEEEEec-CceE
Confidence 999885555555557777776 7998
No 134
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.34 E-value=9.7e-12 Score=89.16 Aligned_cols=113 Identities=20% Similarity=0.304 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhh-------------hh------
Q 026965 97 VEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMAS-------------IL------ 155 (230)
Q Consensus 97 ~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------ 155 (230)
++.+.++++||+++ .+.++|.|+|.|.||-+|+.++...+.+.++|.++++...... ..
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF 82 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc
Confidence 46788899999887 3457999999999999999999999999999887543211100 00
Q ss_pred -------------c--------ccccccccCCCCCEEEEecCCCcccCHHHHH----HHHHhccC--ceEEEEecCCCcc
Q 026965 156 -------------F--------GRHHKAILKSPKPKLFVMGTRDGFTSVKQLQ----NKLSSAAG--RVETHLIEGASHF 208 (230)
Q Consensus 156 -------------~--------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~H~ 208 (230)
+ ....-.+.++++|+|++.|++|.+.|..... +.+++... +.+.+.|+++||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S-
T ss_pred eecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCce
Confidence 0 0011235578999999999999999865544 33444442 4788999999998
Q ss_pred c
Q 026965 209 Q 209 (230)
Q Consensus 209 ~ 209 (230)
+
T Consensus 163 i 163 (213)
T PF08840_consen 163 I 163 (213)
T ss_dssp -
T ss_pred e
Confidence 3
No 135
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.34 E-value=2.3e-10 Score=85.85 Aligned_cols=59 Identities=19% Similarity=0.201 Sum_probs=42.6
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhc---c-CceEEEEecCCCccc-c-cChhhHHHHHHHHHHHHh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSA---A-GRVETHLIEGASHFQ-M-EGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~H~~-~-~~~~~~~~~~~~i~~fl~ 228 (230)
++|+++.+|..|.++|+....+..++. + .+++++.+++.+|.. . ... .....+|.+-++
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~---~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASA---PDALAWLDDRFA 283 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCc---HHHHHHHHHHHC
Confidence 689999999999999988876655443 4 478999999999982 2 222 255566655543
No 136
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=7e-11 Score=93.62 Aligned_cols=199 Identities=19% Similarity=0.207 Sum_probs=134.9
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCC-chhhHHHHHHHHhCCCeEEEEeecc
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGC-QGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
.+..+++.+++.||..+.-.+...+.. +.+++.|.+++.+|+- +.+ ...|..-...|.++|+.....|.||
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~------k~dg~~P~LLygYGay--~isl~p~f~~srl~lld~G~Vla~a~VRG 509 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDI------KLDGSKPLLLYGYGAY--GISLDPSFRASRLSLLDRGWVLAYANVRG 509 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechh------hhcCCCceEEEEeccc--ceeeccccccceeEEEecceEEEEEeecc
Confidence 467788999999999999888875544 4555689999999873 222 2334443445566899999999999
Q ss_pred cccCCCCCCCCCc-----ccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhh
Q 026965 82 VGRSTGKASLTGF-----AEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI 154 (230)
Q Consensus 82 ~g~s~~~~~~~~~-----~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
-|+-.......+. ..++|+.+..++|.++ ...++..+.|.|.||.++..++.+.|.+.+++++..|+-.....
T Consensus 510 GGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t 589 (712)
T KOG2237|consen 510 GGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNT 589 (712)
T ss_pred CcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhh
Confidence 7765433322221 1279999999999876 35678999999999999999999999999888876665333222
Q ss_pred hcc-------------------------cccccccCC----CC-CEEEEecCCCcccCHHHHHHHHHhcc----------
Q 026965 155 LFG-------------------------RHHKAILKS----PK-PKLFVMGTRDGFTSVKQLQNKLSSAA---------- 194 (230)
Q Consensus 155 ~~~-------------------------~~~~~~~~~----~~-p~l~i~g~~D~~~~~~~~~~~~~~~~---------- 194 (230)
... .......++ .= -+|+..+.+|+.|.+.++.++..++.
T Consensus 590 ~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~ 669 (712)
T KOG2237|consen 590 HKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQT 669 (712)
T ss_pred hccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcC
Confidence 110 001111111 12 36888999988777666555544431
Q ss_pred CceEEEEecCCCccc
Q 026965 195 GRVETHLIEGASHFQ 209 (230)
Q Consensus 195 ~~~~~~~~~~~~H~~ 209 (230)
+++-+.+-.++||+.
T Consensus 670 ~pvll~i~~~agH~~ 684 (712)
T KOG2237|consen 670 NPVLLRIETKAGHGA 684 (712)
T ss_pred CCEEEEEecCCcccc
Confidence 235567788999983
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.27 E-value=8.1e-10 Score=86.67 Aligned_cols=197 Identities=15% Similarity=0.096 Sum_probs=105.2
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCC----eEEEEeecccccCCCCCC
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGF----KAVTFDMRGVGRSTGKAS 90 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~g~g~s~~~~~ 90 (230)
-|....+++|.|.+. . ..+.|+|+++||..+. ...........|.+.|. .++.+|..+.. .+...
T Consensus 190 Lg~~r~v~VY~P~~y------~-~~~~PvlyllDG~~w~--~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~e 258 (411)
T PRK10439 190 LGNSRRVWIYTTGDA------A-PEERPLAILLDGQFWA--ESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQE 258 (411)
T ss_pred cCCceEEEEEECCCC------C-CCCCCEEEEEECHHhh--hcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--ccccc
Confidence 356678888888653 1 1238999999997432 22223344556666653 35677642211 11111
Q ss_pred CCCcc-cHHHH-HHHHHHHHhhC----CCCcEEEEEecchHHHHHHhhhcccceEEEE-EcCCcchhh------hhhhcc
Q 026965 91 LTGFA-EVEDV-IAVCKWVSENL----PTNRILLVGSSAGAPIAGSAVDEIEQVVGYV-SLGYPFGMM------ASILFG 157 (230)
Q Consensus 91 ~~~~~-~~~d~-~~~~~~l~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~ 157 (230)
..... ..+.+ .+++-++.+++ +.++.+|+|+||||..|+.++.++|+..+.+ .+++.+-.. ...+..
T Consensus 259 l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~ 338 (411)
T PRK10439 259 LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLE 338 (411)
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHH
Confidence 11110 01122 23444454443 4567899999999999998887776665544 444332110 001111
Q ss_pred ccccc-ccCCCCCEEEEecCCCccc-C-HHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHH
Q 026965 158 RHHKA-ILKSPKPKLFVMGTRDGFT-S-VKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDF 226 (230)
Q Consensus 158 ~~~~~-~~~~~~p~l~i~g~~D~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~f 226 (230)
..... ....+..+++-+|+.|... . .....+.+++.+-++++.+++| ||.+.. +...+.+.+...
T Consensus 339 ~l~~~~~~~~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~---Wr~~L~~~L~~l 406 (411)
T PRK10439 339 QLKAGEVSARGLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDALC---WRGGLIQGLIDL 406 (411)
T ss_pred HHHhcccCCCCceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH---HHHHHHHHHHHH
Confidence 11110 1122346788889888543 1 2334445666666789999997 797432 222445555433
No 138
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.23 E-value=1.5e-10 Score=83.50 Aligned_cols=106 Identities=24% Similarity=0.307 Sum_probs=70.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHh--------CCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhC-
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLAN--------KGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENL- 111 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~- 111 (230)
+.+|||+||. .++...++.+...+.+ ..++++..|+......-.. ..-....+.+.+.++.+.+.+
T Consensus 4 g~pVlFIhG~---~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g--~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGN---AGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG--RTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcC---CCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc--ccHHHHHHHHHHHHHHHHHhhh
Confidence 6789999997 6777777777766632 2477888887643211100 010111355566666666655
Q ss_pred ----CCCcEEEEEecchHHHHHHhhhcc----cceEEEEEcCCcchhh
Q 026965 112 ----PTNRILLVGSSAGAPIAGSAVDEI----EQVVGYVSLGYPFGMM 151 (230)
Q Consensus 112 ----~~~~i~l~G~S~Gg~~a~~~~~~~----~~~~~~~~~~~~~~~~ 151 (230)
+.++++++||||||.++..++... ..+..++.++.|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 678999999999999999777543 3688899998876543
No 139
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.22 E-value=4.1e-09 Score=77.14 Aligned_cols=201 Identities=16% Similarity=0.196 Sum_probs=121.7
Q ss_pred EEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchh-hHHH-----HHHHHhCCCeEEEEeeccc
Q 026965 9 CAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGL-LKGI-----ASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 9 ~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~g~ 82 (230)
..+++.-| .+++.+++..+.. +|++|-.|.. +.+... |..+ .+.+.++ +.++-+|.||+
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~~----------kp~ilT~HDv---GlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGq 66 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKGN----------KPAILTYHDV---GLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQ 66 (283)
T ss_dssp EEEEETTE-EEEEEEESS--TT----------S-EEEEE--T---T--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTT
T ss_pred ceeccCce-EEEEEEEecCCCC----------CceEEEeccc---cccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCC
Confidence 34555555 6888888776532 8999999997 444433 5544 3455554 99999999998
Q ss_pred ccCCCCC-CCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh-cccceEEEEEcCCcchh--hhhh----
Q 026965 83 GRSTGKA-SLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD-EIEQVVGYVSLGYPFGM--MASI---- 154 (230)
Q Consensus 83 g~s~~~~-~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~--~~~~---- 154 (230)
....... ....+..++++.+.+..+.++++.+.++-+|--.||++...+|. ++.++.+++++.+.... +..+
T Consensus 67 e~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K 146 (283)
T PF03096_consen 67 EEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQK 146 (283)
T ss_dssp STT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHH
T ss_pred CCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHH
Confidence 6644322 22233447888888888888999999999999999999997775 55678888887532211 0000
Q ss_pred h----------------------ccc--------------------------------------ccccccCCCCCEEEEe
Q 026965 155 L----------------------FGR--------------------------------------HHKAILKSPKPKLFVM 174 (230)
Q Consensus 155 ~----------------------~~~--------------------------------------~~~~~~~~~~p~l~i~ 174 (230)
+ |.+ .........+|+|++.
T Consensus 147 ~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvv 226 (283)
T PF03096_consen 147 LSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVV 226 (283)
T ss_dssp HH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEE
T ss_pred HhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEE
Confidence 0 000 0011224579999999
Q ss_pred cCCCcccCHHHHHHHHHhccC-ceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 175 GTRDGFTSVKQLQNKLSSAAG-RVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 175 g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
|++.+.. +.+.+...++.+ +..+..++++|=. ..++|. ++.+.++-|++.
T Consensus 227 G~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~---klaea~~lFlQG 278 (283)
T PF03096_consen 227 GDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPG---KLAEAFKLFLQG 278 (283)
T ss_dssp ETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HH---HHHHHHHHHHHH
T ss_pred ecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcH---HHHHHHHHHHcc
Confidence 9988776 445556667764 5789999999887 567887 999999999874
No 140
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.22 E-value=7.4e-10 Score=87.40 Aligned_cols=161 Identities=25% Similarity=0.383 Sum_probs=108.6
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCC--CeEEEEeeccc-ccCCCCCCCCCcc-cHHHHHHHHHH----HHhhCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKG--FKAVTFDMRGV-GRSTGKASLTGFA-EVEDVIAVCKW----VSENLP 112 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~-g~s~~~~~~~~~~-~~~d~~~~~~~----l~~~~~ 112 (230)
.|.+|++||.+-.....+.+..+...|...| ..+..+|++.. |. .... ..+.+..+.++ +..+++
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 6889999998622334444445555555444 33456666531 11 0110 02222222222 223467
Q ss_pred CCcEEEEEecchHHHHHHhhhcc--cceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHH
Q 026965 113 TNRILLVGSSAGAPIAGSAVDEI--EQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKL 190 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 190 (230)
..+|+|+|.|||+.++..+.-.. ..+.++|.+++|+.....-. +...+.+..++.|+|++.|.+|..++++..++..
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgpr-girDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vr 327 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPR-GIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVR 327 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCccc-CCcchhhHhcCCceEEEecCCcccCCHHHHHHHH
Confidence 88999999999988887665432 34888899998887644322 2334566778999999999999999999999888
Q ss_pred HhccCceEEEEecCCCccc
Q 026965 191 SSAAGRVETHLIEGASHFQ 209 (230)
Q Consensus 191 ~~~~~~~~~~~~~~~~H~~ 209 (230)
++.....+++++.+++|.+
T Consensus 328 eKMqA~~elhVI~~adhsm 346 (784)
T KOG3253|consen 328 EKMQAEVELHVIGGADHSM 346 (784)
T ss_pred HHhhccceEEEecCCCccc
Confidence 8888889999999999985
No 141
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.20 E-value=1e-10 Score=86.45 Aligned_cols=164 Identities=15% Similarity=0.208 Sum_probs=109.3
Q ss_pred eeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccC
Q 026965 6 VESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRS 85 (230)
Q Consensus 6 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 85 (230)
-++.++++.||.+|......-... ........||++-|.. +-.+ ......-++.||.|+.+++||++.|
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n------~~~ngq~LvIC~EGNA---GFYE--vG~m~tP~~lgYsvLGwNhPGFagS 282 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPN------QSGNGQDLVICFEGNA---GFYE--VGVMNTPAQLGYSVLGWNHPGFAGS 282 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCC------CCCCCceEEEEecCCc---cceE--eeeecChHHhCceeeccCCCCcccc
Confidence 355677778887776654432211 0111256788887752 2211 1233444566999999999999999
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHhhC--CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhh--------
Q 026965 86 TGKASLTGFAEVEDVIAVCKWVSENL--PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASIL-------- 155 (230)
Q Consensus 86 ~~~~~~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 155 (230)
.+.+..... ...+..++++..+.+ ..+.|++.|+|.||.-++++|..+|+++++++-+ .++......
T Consensus 283 TG~P~p~n~--~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDA-tFDDllpLAl~rMP~~~ 359 (517)
T KOG1553|consen 283 TGLPYPVNT--LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDA-TFDDLLPLALFRMPTFF 359 (517)
T ss_pred CCCCCcccc--hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeec-chhhhhhHHhhhchHHH
Confidence 988866554 355666778877765 4578999999999999999999999999988743 222211111
Q ss_pred ------------cccccccccCCCCCEEEEecCCCcccCH
Q 026965 156 ------------FGRHHKAILKSPKPKLFVMGTRDGFTSV 183 (230)
Q Consensus 156 ------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~ 183 (230)
.-...+.+.+.+.|+.+|--.+|+++..
T Consensus 360 ~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 360 SGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred HHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 1112234556789999999999988643
No 142
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.19 E-value=4e-10 Score=84.09 Aligned_cols=112 Identities=16% Similarity=0.244 Sum_probs=85.4
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhC---------CCeEEEEeeccccc
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANK---------GFKAVTFDMRGVGR 84 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~g~g~ 84 (230)
.+|.++++....|++. +...+-.+++++|||+ ++-..+..+...|.+. -|.|++|.+||+|.
T Consensus 131 IeGL~iHFlhvk~p~~------k~~k~v~PlLl~HGwP---Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygw 201 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQK------KKKKKVKPLLLLHGWP---GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGW 201 (469)
T ss_pred hcceeEEEEEecCCcc------ccCCcccceEEecCCC---chHHHHHhhhhhhcCccccCCccceeEEEeccCCCCccc
Confidence 4799999998888754 2222245799999994 6666666677777653 26799999999999
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc
Q 026965 85 STGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE 136 (230)
Q Consensus 85 s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 136 (230)
|+.+...... ....+.+++-|.-+++.+++.+-|--+|+.++..++..+|
T Consensus 202 Sd~~sk~GFn--~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyP 251 (469)
T KOG2565|consen 202 SDAPSKTGFN--AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYP 251 (469)
T ss_pred CcCCccCCcc--HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcc
Confidence 9977654443 3566677777777889999999999999999998887554
No 143
>PRK04940 hypothetical protein; Provisional
Probab=99.19 E-value=2.5e-09 Score=73.25 Aligned_cols=106 Identities=14% Similarity=0.035 Sum_probs=69.2
Q ss_pred CcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhh---hhhc---------cccccccc-CCCCCEEEEecCCCcc
Q 026965 114 NRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMA---SILF---------GRHHKAIL-KSPKPKLFVMGTRDGF 180 (230)
Q Consensus 114 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~~~~~~~~-~~~~p~l~i~g~~D~~ 180 (230)
+++.++|.|+||+.|.+++.+.. + .+|++.+...... ...- .+....+. +..-..+++..+.|++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEV 137 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEEEeCCCcc
Confidence 57999999999999999998765 3 3445555443321 1111 00011121 1233469999999999
Q ss_pred cCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHh
Q 026965 181 TSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~ 228 (230)
.+..++.+.+... .+..+.+|++|.+.+-. +....|.+|++
T Consensus 138 LDyr~a~~~y~~~---y~~~v~~GGdH~f~~fe----~~l~~I~~F~~ 178 (180)
T PRK04940 138 LDSQRTAEELHPY---YEIVWDEEQTHKFKNIS----PHLQRIKAFKT 178 (180)
T ss_pred cCHHHHHHHhccC---ceEEEECCCCCCCCCHH----HHHHHHHHHHh
Confidence 9998887666533 26889999999864433 56677777775
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.13 E-value=2.7e-09 Score=77.52 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=86.7
Q ss_pred CceeEEEECCCCCCCCCchhhHHHHHHHHhCCC--eEEEEeecccccCCCCCCCCC--cccHHHHHHHHHHHHhhCCCCc
Q 026965 40 SSLAIVLVHPYSILGGCQGLLKGIASGLANKGF--KAVTFDMRGVGRSTGKASLTG--FAEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 40 ~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~g~g~s~~~~~~~~--~~~~~d~~~~~~~l~~~~~~~~ 115 (230)
.+.++||+||+. ..........++.....++ .++.+.||..|....-..... ......+.++++.+....+.++
T Consensus 17 ~~~vlvfVHGyn--~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 17 DKEVLVFVHGYN--NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCeEEEEEeCCC--CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 378999999983 2222333334433333333 699999997765322111111 1125667777777766667899
Q ss_pred EEEEEecchHHHHHHhhhc----c------cceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHH
Q 026965 116 ILLVGSSAGAPIAGSAVDE----I------EQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQ 185 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~ 185 (230)
|.+++||||+.+.+.+... . ..+..++++++-... ..+......+.+...++.+.+..+|.....+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~---d~f~~~~~~~~~~~~~itvy~s~~D~AL~~S~ 171 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN---DVFRSQLPDLGSSARRITVYYSRNDRALKASR 171 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH---HHHHHHHHHHhhcCCCEEEEEcCCchHHHHHH
Confidence 9999999999999977642 1 134455555433332 22233333555566899999999998765544
No 145
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.11 E-value=8e-09 Score=82.74 Aligned_cols=205 Identities=16% Similarity=0.123 Sum_probs=131.5
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc-hhhHHHHHHHHhCCCeEEEEeecc
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ-GLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
++..+.+..+..||.++...++..++. +.+++.|++++..|.- +.+. ..+....-.|.++|+.......||
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~------~~~g~~p~lLygYGaY--G~s~~p~Fs~~~lSLlDRGfiyAIAHVRG 487 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDT------KLDGSAPLLLYGYGAY--GISMDPSFSIARLSLLDRGFVYAIAHVRG 487 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEeccc------CCCCCCcEEEEEeccc--cccCCcCcccceeeeecCceEEEEEEeec
Confidence 466778888889999999988777653 3445588888888863 3333 234444556778999888888888
Q ss_pred cccCCCCCCCC-----CcccHHHHHHHHHHHHhh--CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhh
Q 026965 82 VGRSTGKASLT-----GFAEVEDVIAVCKWVSEN--LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASI 154 (230)
Q Consensus 82 ~g~s~~~~~~~-----~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
-|.-....... ......|+.++.++|.+. ...++++++|-|.||++...++...|++.+.|+...|+-.....
T Consensus 488 GgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltT 567 (682)
T COG1770 488 GGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTT 567 (682)
T ss_pred ccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhh
Confidence 66544322111 112268999999998775 34568999999999999999988888777776665555332222
Q ss_pred hccc----------------------------ccccccCC-CCCEEEEecCCCcccCHHHHHHHHHhcc---Cc---eEE
Q 026965 155 LFGR----------------------------HHKAILKS-PKPKLFVMGTRDGFTSVKQLQNKLSSAA---GR---VET 199 (230)
Q Consensus 155 ~~~~----------------------------~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~---~~~ 199 (230)
+... ..+++..- =.++|++.|..|+.|..-+-.++..++. .+ .-+
T Consensus 568 MlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLl 647 (682)
T COG1770 568 MLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLL 647 (682)
T ss_pred hcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEE
Confidence 2111 11222221 2478999999999997655444554442 22 223
Q ss_pred EEecCCCcc-cccChhh
Q 026965 200 HLIEGASHF-QMEGPAY 215 (230)
Q Consensus 200 ~~~~~~~H~-~~~~~~~ 215 (230)
..=-.+||. .-...+.
T Consensus 648 kt~M~aGHgG~SgRf~~ 664 (682)
T COG1770 648 KTNMDAGHGGASGRFQR 664 (682)
T ss_pred EecccccCCCCCCchHH
Confidence 332458998 5444443
No 146
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.10 E-value=7.9e-11 Score=83.88 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=56.0
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCe---EEEEeecccccCCCCCC-CCCcccHHHHHHHHHHHHhhCCCCcEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFK---AVTFDMRGVGRSTGKAS-LTGFAEVEDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~-~~~~~~~~d~~~~~~~l~~~~~~~~i~ 117 (230)
.+|||+||.. +.....|..+++.|.++||. ++++++-.......... ........+++++++.+++.-+. +|-
T Consensus 2 ~PVVlVHG~~--~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTG--GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVD 78 (219)
T ss_dssp --EEEE--TT--TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EE
T ss_pred CCEEEECCCC--cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEE
Confidence 3699999983 33678899999999999999 79998743222111111 11112246788888888877788 999
Q ss_pred EEEecchHHHHHHhhh
Q 026965 118 LVGSSAGAPIAGSAVD 133 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~ 133 (230)
|+||||||.++..+..
T Consensus 79 IVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIK 94 (219)
T ss_dssp EEEETCHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHH
Confidence 9999999999998775
No 147
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.10 E-value=3.6e-09 Score=73.06 Aligned_cols=184 Identities=16% Similarity=0.174 Sum_probs=98.5
Q ss_pred CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh---HHHHHHHHhCCCeEEEEee--ccc---ccCCC
Q 026965 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL---KGIASGLANKGFKAVTFDM--RGV---GRSTG 87 (230)
Q Consensus 16 g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~--~g~---g~s~~ 87 (230)
+..|.+-+|-|.... ...+.|++.++.|.+ .+...+ ..+.+...++|+.|+.||- ||. |.++.
T Consensus 25 ~c~Mtf~vylPp~a~------~~k~~P~lf~LSGLT---CT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~es 95 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAP------RGKRCPVLFYLSGLT---CTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDES 95 (283)
T ss_pred ccceEEEEecCCCcc------cCCcCceEEEecCCc---ccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCccc
Confidence 467888888886642 122278999999985 333322 2345566678999999994 443 22210
Q ss_pred CC---------------CCCCcccH----HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-c---ceEEEEEc
Q 026965 88 KA---------------SLTGFAEV----EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-E---QVVGYVSL 144 (230)
Q Consensus 88 ~~---------------~~~~~~~~----~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~---~~~~~~~~ 144 (230)
-+ ....+.+. +++.+.++.....++..++.++||||||+-|+..+.+. . .+.++..+
T Consensus 96 wDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 96 WDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred ccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 00 00001111 12222221111125667899999999999999665443 2 34444444
Q ss_pred CCcchh-hhhhhcc----------------cccccccCCCCCEEEEecCCCcccC----HHHHHHHHHhcc-CceEEEEe
Q 026965 145 GYPFGM-MASILFG----------------RHHKAILKSPKPKLFVMGTRDGFTS----VKQLQNKLSSAA-GRVETHLI 202 (230)
Q Consensus 145 ~~~~~~-~~~~~~~----------------~~~~~~~~~~~p~l~i~g~~D~~~~----~~~~~~~~~~~~-~~~~~~~~ 202 (230)
..|..- +....+. .........+.-+|+=+|+.|.+.+ |+...+..+... ..+.+...
T Consensus 176 ~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~ 255 (283)
T KOG3101|consen 176 CNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQ 255 (283)
T ss_pred cCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEee
Confidence 433221 0011000 0112233455668999999999876 222222122111 34677888
Q ss_pred cCCCcc
Q 026965 203 EGASHF 208 (230)
Q Consensus 203 ~~~~H~ 208 (230)
+|.+|.
T Consensus 256 ~gyDHS 261 (283)
T KOG3101|consen 256 EGYDHS 261 (283)
T ss_pred cCCCcc
Confidence 999998
No 148
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.08 E-value=5.7e-08 Score=70.65 Aligned_cols=203 Identities=17% Similarity=0.201 Sum_probs=136.3
Q ss_pred eeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchh-hHHH-----HHHHHhCCCeEEEEee
Q 026965 6 VESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGL-LKGI-----ASGLANKGFKAVTFDM 79 (230)
Q Consensus 6 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~ 79 (230)
.++..+.+.-| .+++.+++..+.. +|++|-.|..+ .+... |..+ ...+.++ +.++-+|.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~----------kpaiiTyhDlg---lN~~scFq~ff~~p~m~ei~~~-fcv~HV~~ 86 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGN----------KPAIITYHDLG---LNHKSCFQGFFNFPDMAEILEH-FCVYHVDA 86 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCC----------CceEEEecccc---cchHhHhHHhhcCHhHHHHHhh-eEEEecCC
Confidence 35666776666 4888888875532 78899999974 43332 4443 4566676 99999999
Q ss_pred cccccCCCC-CCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcCCcch--hhhhh-
Q 026965 80 RGVGRSTGK-ASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFG--MMASI- 154 (230)
Q Consensus 80 ~g~g~s~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~--~~~~~- 154 (230)
||+-..... +....+...+++.+.+..+.++++.+.++-+|--.|+++..++|.. ++++.++|++..-.. .+-.|
T Consensus 87 PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 87 PGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred CccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH
Confidence 998554322 2232344479999999999999999999999999999999977764 567888888753211 00000
Q ss_pred -------------------------hccccc----------------------------------c----c----ccCCC
Q 026965 155 -------------------------LFGRHH----------------------------------K----A----ILKSP 167 (230)
Q Consensus 155 -------------------------~~~~~~----------------------------------~----~----~~~~~ 167 (230)
.|.+.. . . ...++
T Consensus 167 ~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlk 246 (326)
T KOG2931|consen 167 YNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLK 246 (326)
T ss_pred HHHHHHHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCcccc
Confidence 000000 0 0 00346
Q ss_pred CCEEEEecCCCcccCHHHHHHHHHhcc-CceEEEEecCCCccccc-ChhhHHHHHHHHHHHHh
Q 026965 168 KPKLFVMGTRDGFTSVKQLQNKLSSAA-GRVETHLIEGASHFQME-GPAYDAQMVNLILDFIA 228 (230)
Q Consensus 168 ~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~~H~~~~-~~~~~~~~~~~i~~fl~ 228 (230)
+|+|++.|++.+.+. .+.+.-.++. .+..+..+.++|-...+ +|. ++.+.+.-|++
T Consensus 247 c~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~---kl~ea~~~Flq 304 (326)
T KOG2931|consen 247 CPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPG---KLAEAFKYFLQ 304 (326)
T ss_pred ccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCch---HHHHHHHHHHc
Confidence 999999999887763 3333334444 35788888898888554 777 88888888875
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.08 E-value=1.6e-08 Score=71.93 Aligned_cols=180 Identities=19% Similarity=0.250 Sum_probs=108.9
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCC-----CeEEEEeecccccCCCCCC----------------CCCcccHHHH
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKG-----FKAVTFDMRGVGRSTGKAS----------------LTGFAEVEDV 100 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~g~s~~~~~----------------~~~~~~~~d~ 100 (230)
-+.||+||. +++......++..|.+.+ --++.+|--|.=..++..+ ........-+
T Consensus 46 iPTIfIhGs---gG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 46 IPTIFIHGS---GGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cceEEEecC---CCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 468899997 788888999999888764 1245555544211111100 0001113446
Q ss_pred HHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh------cccceEEEEEcCCcchh--hh------hhhcccc-------
Q 026965 101 IAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD------EIEQVVGYVSLGYPFGM--MA------SILFGRH------- 159 (230)
Q Consensus 101 ~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~------~~~~~~~~~~~~~~~~~--~~------~~~~~~~------- 159 (230)
..++.+|.++++..++-++||||||.-...++. ..|.+...+.++.|+.. .. .......
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y 202 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPY 202 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHH
Confidence 667788888999999999999999998887764 34788999999988871 00 0000000
Q ss_pred cc------cccCCCCCEEEEecCCCc------ccCHHHHHHHHHhcc--Cce-EEEEec--CCCcc-cccChhhHHHHHH
Q 026965 160 HK------AILKSPKPKLFVMGTRDG------FTSVKQLQNKLSSAA--GRV-ETHLIE--GASHF-QMEGPAYDAQMVN 221 (230)
Q Consensus 160 ~~------~~~~~~~p~l~i~g~~D~------~~~~~~~~~~~~~~~--~~~-~~~~~~--~~~H~-~~~~~~~~~~~~~ 221 (230)
.+ ....-.+.++.|.|+-|. .||...+.....-.. ++. .--+++ ++.|. +.+++ .+.+
T Consensus 203 ~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~----~v~~ 278 (288)
T COG4814 203 YDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENP----TVAK 278 (288)
T ss_pred HHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCCh----hHHH
Confidence 00 001124678999998764 466655543222222 222 222444 47898 66766 5667
Q ss_pred HHHHHHh
Q 026965 222 LILDFIA 228 (230)
Q Consensus 222 ~i~~fl~ 228 (230)
.+..||-
T Consensus 279 yv~~FLw 285 (288)
T COG4814 279 YVKNFLW 285 (288)
T ss_pred HHHHHhh
Confidence 7777764
No 150
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.01 E-value=1e-07 Score=72.19 Aligned_cols=183 Identities=11% Similarity=0.123 Sum_probs=111.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc--ccCCC--------------CCCCCC-----------
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV--GRSTG--------------KASLTG----------- 93 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--g~s~~--------------~~~~~~----------- 93 (230)
..+||++||.+...........+.+.|.+.|+.++++..|.- ..... ......
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 678999999854444456677888999999999999988861 10000 000000
Q ss_pred --c-----ccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc--cceEEEEEcCCcchhhhhhhccccccccc
Q 026965 94 --F-----AEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI--EQVVGYVSLGYPFGMMASILFGRHHKAIL 164 (230)
Q Consensus 94 --~-----~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (230)
. .....+.+++.++.+ .+..+++|+||+.|++.++.+.... +.+.++|+++........ .....+.+.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~--n~~l~~~la 243 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR--NPALAEQLA 243 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh--hhhHHHHhh
Confidence 0 002333444444433 3666799999999999999776543 457788888765543222 112234566
Q ss_pred CCCCCEEEEecCCCcccCHHHH--HHHHHh-c-cCceEEEEecCCCcccccChhhHHHHHHHHHHHHhhC
Q 026965 165 KSPKPKLFVMGTRDGFTSVKQL--QNKLSS-A-AGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIASL 230 (230)
Q Consensus 165 ~~~~p~l~i~g~~D~~~~~~~~--~~~~~~-~-~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~~ 230 (230)
++++|+|=|++.+...+- ... ++...+ . ..+.+-+.+++..|......+ .+.+.|+.||+++
T Consensus 244 ~l~iPvLDi~~~~~~~~~-~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~---~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 244 QLKIPVLDIYSADNPASQ-QTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQE---QLLRRIRGWLKRH 309 (310)
T ss_pred ccCCCEEEEecCCChHHH-HHHHHHHHHHHhccCCCceeEecCCCCCChhhHHH---HHHHHHHHHHHhh
Confidence 789999999987733322 221 112222 2 245666777777665432222 5999999999763
No 151
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.00 E-value=2.7e-09 Score=86.52 Aligned_cols=119 Identities=24% Similarity=0.301 Sum_probs=76.4
Q ss_pred eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhC--CCeEEEEeec-cc---ccCCCCCCC
Q 026965 18 KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANK--GFKAVTFDMR-GV---GRSTGKASL 91 (230)
Q Consensus 18 ~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~-g~---g~s~~~~~~ 91 (230)
-|...+|.|... .+..+.|+||++||+++..++...+ ....++.. |+.|+.+++| |. ...... ..
T Consensus 78 cl~l~i~~p~~~------~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~ 148 (493)
T cd00312 78 CLYLNVYTPKNT------KPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-EL 148 (493)
T ss_pred CCeEEEEeCCCC------CCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CC
Confidence 367777888643 1123479999999998655555443 23344443 3899999999 32 222111 11
Q ss_pred CCcccHHHHHHHHHHHHhh-----CCCCcEEEEEecchHHHHHHhhhcc---cceEEEEEcC
Q 026965 92 TGFAEVEDVIAVCKWVSEN-----LPTNRILLVGSSAGAPIAGSAVDEI---EQVVGYVSLG 145 (230)
Q Consensus 92 ~~~~~~~d~~~~~~~l~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~---~~~~~~~~~~ 145 (230)
....-..|...+++|+++. .+.++|.|+|+|.||.++..++..+ +.+.++|+.+
T Consensus 149 ~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~s 210 (493)
T cd00312 149 PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQS 210 (493)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhc
Confidence 2222268999999999875 3678999999999999999766542 2344444443
No 152
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.99 E-value=2.4e-07 Score=65.85 Aligned_cols=101 Identities=21% Similarity=0.192 Sum_probs=67.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC-C--CeEEEEeecccccCCC---CCC----CCCcccHHHHHHHHHHHHhh
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK-G--FKAVTFDMRGVGRSTG---KAS----LTGFAEVEDVIAVCKWVSEN 110 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~g~g~s~~---~~~----~~~~~~~~d~~~~~~~l~~~ 110 (230)
.+.++++.|. .+...+|..++..|... + ..+..+...||-.-+. ... ..-+...+.+..-++++++.
T Consensus 29 ~~li~~IpGN---PG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 29 KPLIVWIPGN---PGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred ceEEEEecCC---CCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 7899999997 67788899998888654 1 4477777666644331 111 11112245677778888887
Q ss_pred CCC-CcEEEEEecchHHHHHHhhhcc---cceEEEEEc
Q 026965 111 LPT-NRILLVGSSAGAPIAGSAVDEI---EQVVGYVSL 144 (230)
Q Consensus 111 ~~~-~~i~l~G~S~Gg~~a~~~~~~~---~~~~~~~~~ 144 (230)
++. .+++++|||-|+++.+...... -.+..++++
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLL 143 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEe
Confidence 654 6899999999999999777521 234444444
No 153
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.98 E-value=1.8e-09 Score=79.80 Aligned_cols=156 Identities=17% Similarity=0.112 Sum_probs=80.4
Q ss_pred CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch--hhHHHHHHHHhCC----CeEEEEeecccccCC--C
Q 026965 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG--LLKGIASGLANKG----FKAVTFDMRGVGRST--G 87 (230)
Q Consensus 16 g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~--~~~~~~~~l~~~g----~~v~~~d~~g~g~s~--~ 87 (230)
|....+++|.|.+- +.+.+.|+|+++||. ..... ......+.+.+.| ..+++++..+..... .
T Consensus 5 g~~~~~~VylP~~y------~~~~~~PvlylldG~---~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~ 75 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY------DPSKPYPVLYLLDGQ---SGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSW 75 (251)
T ss_dssp TEEEEEEEEECTTG------GTTTTEEEEEEESHT---THHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBT
T ss_pred CCeEEEEEEECCCC------CCCCCCEEEEEccCC---ccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccccc
Confidence 56788888988873 233448999999994 11111 1222333333332 334555543333111 0
Q ss_pred C--------CCCCCc-ccH-HH-HHHHHHHHHhhCCC--CcEEEEEecchHHHHHHhhhcccceEE-EEEcCCcchhhhh
Q 026965 88 K--------ASLTGF-AEV-ED-VIAVCKWVSENLPT--NRILLVGSSAGAPIAGSAVDEIEQVVG-YVSLGYPFGMMAS 153 (230)
Q Consensus 88 ~--------~~~~~~-~~~-~d-~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~-~~~~~~~~~~~~~ 153 (230)
. ...... ... +. ..+++.++.+++.. ++..++|+||||..|+.++.++|++.+ ++.+++.+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~ 155 (251)
T PF00756_consen 76 YLPAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPS 155 (251)
T ss_dssp TSSBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHC
T ss_pred ccccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccccc
Confidence 0 000010 011 11 23455566666543 237999999999999988877766554 4445432111111
Q ss_pred hhc---------cccc-----ccccCCCCCEEEEecCCCcc
Q 026965 154 ILF---------GRHH-----KAILKSPKPKLFVMGTRDGF 180 (230)
Q Consensus 154 ~~~---------~~~~-----~~~~~~~~p~l~i~g~~D~~ 180 (230)
.+. .... ........++++..|+.|..
T Consensus 156 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~ 196 (251)
T PF00756_consen 156 LWGPSDDEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEF 196 (251)
T ss_dssp HHHHSTCGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTT
T ss_pred ccCcCCcHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcc
Confidence 110 0000 01223356788889999983
No 154
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.96 E-value=2.7e-08 Score=89.65 Aligned_cols=175 Identities=13% Similarity=0.089 Sum_probs=104.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHH-HHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAV-CKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~-~~~l~~~~~~~~i~l~ 119 (230)
.++++++||+ ++....|..+.+.|... +.|+.++.+|++..... . ..++++.+. +..+.......++.++
T Consensus 1068 ~~~l~~lh~~---~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~~--~---~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPA---SGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQT--A---TSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCC---CCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCCC--C---CCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 5679999998 56778899999998764 99999999999754221 1 123444333 2333333344689999
Q ss_pred EecchHHHHHHhhhc----ccceEEEEEcCCcchhh------------hhhh----------c----cc-----------
Q 026965 120 GSSAGAPIAGSAVDE----IEQVVGYVSLGYPFGMM------------ASIL----------F----GR----------- 158 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~----~~~~~~~~~~~~~~~~~------------~~~~----------~----~~----------- 158 (230)
|||+||.++..++.+ ..++..++++....... .... . ..
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEG 1218 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHH
Confidence 999999999988763 34566666554311100 0000 0 00
Q ss_pred c----c-----ccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHH
Q 026965 159 H----H-----KAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDF 226 (230)
Q Consensus 159 ~----~-----~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~f 226 (230)
. . ........|++++.+..|......... .+++..++.+...++ ++|+.+..+.....+.+.+.+-
T Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~W~~~~~~~~~~~v~-g~H~~~~~~~~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1219 NYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQ-AWSPWIAELDVYRQD-CAHVDIISPEAFEKIGPILRAT 1293 (1296)
T ss_pred HHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCccc-chhhhcCCCEEEECC-CCHHHHCCcHHHHHHHHHHHHH
Confidence 0 0 012245689999999888655443333 233333667888887 5899443444334555555443
No 155
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.96 E-value=2.2e-09 Score=84.46 Aligned_cols=95 Identities=12% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.....|..+.+.|.+.||.. ..|++|+|.+.+.... .....+++.+.++.+.+..+.+++.++||||||.++..++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~-~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR-LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc-HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 34567889999999999855 7899999988765321 112257888888888888788899999999999999977765
Q ss_pred cc-----ceEEEEEcCCcchhh
Q 026965 135 IE-----QVVGYVSLGYPFGMM 151 (230)
Q Consensus 135 ~~-----~~~~~~~~~~~~~~~ 151 (230)
.+ .+..+|.+++|+...
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 43 367888888877654
No 156
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.95 E-value=6.9e-09 Score=80.78 Aligned_cols=108 Identities=22% Similarity=0.263 Sum_probs=76.4
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCC-CeEEEEeecc--cccCCCC-----CC
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKG-FKAVTFDMRG--VGRSTGK-----AS 90 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g-~~v~~~d~~g--~g~s~~~-----~~ 90 (230)
|...+|.|... ..+.|++|+|||+++..++......-...|+++| +.|+++|||- .|.-... ..
T Consensus 80 L~LNIwaP~~~--------a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~ 151 (491)
T COG2272 80 LYLNIWAPEVP--------AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDA 151 (491)
T ss_pred eeEEeeccCCC--------CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccc
Confidence 66777888722 1227999999999877777666555567888888 8999999983 1211111 11
Q ss_pred CCCcccHHHHHHHHHHHHhhC-----CCCcEEEEEecchHHHHHHhhhc
Q 026965 91 LTGFAEVEDVIAVCKWVSENL-----PTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 91 ~~~~~~~~d~~~~~~~l~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.....-+.|...+++|+++.+ |.++|.|+|+|.||+.++.++..
T Consensus 152 ~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 152 FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC
Confidence 111122789999999998863 67899999999999999866654
No 157
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.91 E-value=2.8e-09 Score=81.13 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=62.2
Q ss_pred CCCceeEEEECCCCCCCCCchhhHHHHHHHHh---CCCeEEEEeecccccCCCCCCCCCcc----cHHHHHHHHHHHHhh
Q 026965 38 DSSSLAIVLVHPYSILGGCQGLLKGIASGLAN---KGFKAVTFDMRGVGRSTGKASLTGFA----EVEDVIAVCKWVSEN 110 (230)
Q Consensus 38 ~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~---~g~~v~~~d~~g~g~s~~~~~~~~~~----~~~d~~~~~~~l~~~ 110 (230)
+.+.|++|++|||............+.+.+.+ .+++|+++|+...-. . .. ..... -...+..+++.|...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~-~-~Y-~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS-N-NY-PQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS-S--H-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc-c-cc-cchhhhHHHHHHHHHHHHHHHHhh
Confidence 44589999999996322123444556665544 479999999963321 1 10 00000 034455566666533
Q ss_pred --CCCCcEEEEEecchHHHHHHhhhccc---ceEEEEEcCCcch
Q 026965 111 --LPTNRILLVGSSAGAPIAGSAVDEIE---QVVGYVSLGYPFG 149 (230)
Q Consensus 111 --~~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~~~~~~~~ 149 (230)
++.+++.++|||+||.+|..++.... ++..++.+.++..
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 67789999999999999998887654 4667777765544
No 158
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.90 E-value=1.2e-08 Score=83.57 Aligned_cols=122 Identities=20% Similarity=0.169 Sum_probs=76.1
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCch-hhHHHHHHHHhCCCeEEEEeecc----cccCCCCCCCCC
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQG-LLKGIASGLANKGFKAVTFDMRG----VGRSTGKASLTG 93 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g----~g~s~~~~~~~~ 93 (230)
|+.-+|.|.... ...+.|++|++||+++..++.. ....-...+++++..|+.++||- +-.+.......+
T Consensus 109 L~LnI~~P~~~~------~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 109 LYLNIYTPSNAS------SNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp -EEEEEEETSSS------STTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred HHHhhhhccccc------cccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCch
Confidence 777788887752 2225899999999987666652 22333455667789999999983 222221111113
Q ss_pred cccHHHHHHHHHHHHhhC-----CCCcEEEEEecchHHHHHHhhhcc---cceEEEEEcCC
Q 026965 94 FAEVEDVIAVCKWVSENL-----PTNRILLVGSSAGAPIAGSAVDEI---EQVVGYVSLGY 146 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~~---~~~~~~~~~~~ 146 (230)
..-+.|...+++|+++.+ |.++|.|+|+|.||..+...+..+ .-+.++|+.+.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 333789999999998874 468999999999999888555432 34666776654
No 159
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.89 E-value=2.4e-07 Score=70.83 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=65.3
Q ss_pred ceeEEEECCCCCCCCCchhhH----HHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcE
Q 026965 41 SLAIVLVHPYSILGGCQGLLK----GIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRI 116 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~----~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 116 (230)
.|+||++||+|..-....... .+...|. ...+++.||.-... ..........+.++.+..+++.+..+.++|
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~--~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI 197 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS--DEHGHKYPTQLRQLVATYDYLVESEGNKNI 197 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc--ccCCCcCchHHHHHHHHHHHHHhccCCCeE
Confidence 799999999974333333222 2223333 36899999874420 111222222267778888888866688999
Q ss_pred EEEEecchHHHHHHhhhc------ccceEEEEEcCC
Q 026965 117 LLVGSSAGAPIAGSAVDE------IEQVVGYVSLGY 146 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~~------~~~~~~~~~~~~ 146 (230)
+|+|-|.||.+++.++.. .+..++++++++
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 999999999999966542 123466777654
No 160
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.88 E-value=5.8e-08 Score=73.31 Aligned_cols=69 Identities=19% Similarity=0.392 Sum_probs=52.9
Q ss_pred ccccCCC-CCEEEEecCCCcccCHHHHHHHHHhccC-ceEEEEecCCCcccc-cChhhHHHHHHHHHHHHhh
Q 026965 161 KAILKSP-KPKLFVMGTRDGFTSVKQLQNKLSSAAG-RVETHLIEGASHFQM-EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 161 ~~~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~-~~~~~~~~~~~~i~~fl~~ 229 (230)
..+..+. .|+|+++|.+|..+|.......+..... +.+...+++++|... .......+..+.+.+|+.+
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 3344555 7999999999999999999888888776 678888999999944 3444444677778888764
No 161
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.80 E-value=3.4e-08 Score=70.70 Aligned_cols=178 Identities=13% Similarity=0.169 Sum_probs=104.4
Q ss_pred ceeEEEECCCCCCCCCchhhH--HHHHHHHhCCCeEEEEeecccccCCCCCCCCCc------------ccHHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLK--GIASGLANKGFKAVTFDMRGVGRSTGKASLTGF------------AEVEDVIAVCKW 106 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~------------~~~~d~~~~~~~ 106 (230)
.++.|++-|- ++..+.+ .+..-+.++|...+.++-|.+|...+....... ..+++....+.|
T Consensus 113 ~~KOG~~a~t----gdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~W 188 (371)
T KOG1551|consen 113 ADLCLSWALT----GDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTW 188 (371)
T ss_pred CCeeEEEeec----CCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 6677777763 3333333 466778888999999999999887643321110 012222233322
Q ss_pred HHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchh----hhhhhcc-------------------------
Q 026965 107 VSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGM----MASILFG------------------------- 157 (230)
Q Consensus 107 l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------------------- 157 (230)
.+..+..++.++|-||||.+|..+...+++..+.+.+-.+... ....+..
T Consensus 189 -s~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~ 267 (371)
T KOG1551|consen 189 -SSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQS 267 (371)
T ss_pred -ccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhh
Confidence 2235678999999999999999998866555444332111100 0000000
Q ss_pred ------------------------cccccccCCCCC-----EEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc
Q 026965 158 ------------------------RHHKAILKSPKP-----KLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 158 ------------------------~~~~~~~~~~~p-----~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
+....+.+..+| +.++.+++|..+|..... .++++.|++++..++ +||.
T Consensus 268 ~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~-~lQ~~WPg~eVr~~e-gGHV 345 (371)
T KOG1551|consen 268 YHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVR-SLQEIWPGCEVRYLE-GGHV 345 (371)
T ss_pred HHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcH-HHHHhCCCCEEEEee-cCce
Confidence 001112233444 478889999999975554 688889999999999 6998
Q ss_pred --cccChhhHHHHHHHHHHHHh
Q 026965 209 --QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 209 --~~~~~~~~~~~~~~i~~fl~ 228 (230)
++...+ .+.+.|.+-|+
T Consensus 346 sayl~k~d---lfRR~I~d~L~ 364 (371)
T KOG1551|consen 346 SAYLFKQD---LFRRAIVDGLD 364 (371)
T ss_pred eeeehhch---HHHHHHHHHHH
Confidence 333333 44444444443
No 162
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.80 E-value=8.9e-07 Score=70.43 Aligned_cols=107 Identities=15% Similarity=0.233 Sum_probs=62.2
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHH-------------------HHHHhCCCeE
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIA-------------------SGLANKGFKA 74 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~-------------------~~l~~~g~~v 74 (230)
..+..+.|+.+...+.. + ..|+||++.|++ +++..+..+. ..+.+. .++
T Consensus 21 ~~~~~lfyw~~~s~~~~-----~---~~Pl~~wlnGGP---G~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~ 88 (415)
T PF00450_consen 21 NENAHLFYWFFESRNDP-----E---DDPLILWLNGGP---GCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANL 88 (415)
T ss_dssp TTTEEEEEEEEE-SSGG-----C---SS-EEEEEE-TT---TB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEE
T ss_pred CCCcEEEEEEEEeCCCC-----C---CccEEEEecCCc---eeccccccccccCceEEeecccccccccccccccc-cce
Confidence 36778999999776532 2 289999999996 3333332221 122333 689
Q ss_pred EEEeec-ccccCCCCCCCC-Cccc---HHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhh
Q 026965 75 VTFDMR-GVGRSTGKASLT-GFAE---VEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 75 ~~~d~~-g~g~s~~~~~~~-~~~~---~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
+.+|.| |.|.|....... .... .+++..+++....+ +...+++|.|-|+||..+-.++
T Consensus 89 l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a 154 (415)
T PF00450_consen 89 LFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALA 154 (415)
T ss_dssp EEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHH
T ss_pred EEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhH
Confidence 999965 889887655442 1222 34444444433333 4556999999999999876555
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.78 E-value=1.2e-07 Score=71.15 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=65.6
Q ss_pred CceeEEEECCCCCCCCCchhhHHHHHHHHhCCCe--EEEEeecccccCCCCCCC--CCcccHHHHHHHHHHHHhhCCCCc
Q 026965 40 SSLAIVLVHPYSILGGCQGLLKGIASGLANKGFK--AVTFDMRGVGRSTGKASL--TGFAEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 40 ~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~--v~~~d~~g~g~s~~~~~~--~~~~~~~d~~~~~~~l~~~~~~~~ 115 (230)
.+.+++|+||+. ..-...-.+.++...+.|+. .+.+.||..|.--+-... .......+++.++++|....+.++
T Consensus 115 ~k~vlvFvHGfN--ntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 115 AKTVLVFVHGFN--NTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCeEEEEEcccC--CchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 378999999994 33344455666766666654 677888866553322211 112226889999999999888899
Q ss_pred EEEEEecchHHHHHHhhh
Q 026965 116 ILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~ 133 (230)
|+|++||||.++++.+++
T Consensus 193 I~ilAHSMGtwl~~e~Lr 210 (377)
T COG4782 193 IYLLAHSMGTWLLMEALR 210 (377)
T ss_pred EEEEEecchHHHHHHHHH
Confidence 999999999999997764
No 164
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.76 E-value=1.5e-06 Score=68.37 Aligned_cols=49 Identities=16% Similarity=0.145 Sum_probs=36.3
Q ss_pred ccCCCCCEEEEecCCCcccCHHHHHHHHHhccC----------ceEEEEecCCCcc-ccc
Q 026965 163 ILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAG----------RVETHLIEGASHF-QME 211 (230)
Q Consensus 163 ~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~H~-~~~ 211 (230)
+.+|++|++++.|..|.++|++++..++....+ ..-+.+.+..||. .+-
T Consensus 293 Lr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFV 352 (581)
T PF11339_consen 293 LRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFV 352 (581)
T ss_pred hhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEe
Confidence 457899999999999999999998655444332 2344566789998 543
No 165
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.74 E-value=5.7e-07 Score=68.39 Aligned_cols=85 Identities=24% Similarity=0.271 Sum_probs=66.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
...-||+.|- ++....-+....+|.++|+.|+.+|---|-.++..+... ..|+.+++++...+.+.+++.|+|
T Consensus 260 d~~av~~SGD---GGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~----a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 260 DTVAVFYSGD---GGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQI----AADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred ceEEEEEecC---CchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHH----HHHHHHHHHHHHHhhCcceEEEEe
Confidence 6677788874 676777788999999999999999954454554443322 589999999999999999999999
Q ss_pred ecchHHHHHHhh
Q 026965 121 SSAGAPIAGSAV 132 (230)
Q Consensus 121 ~S~Gg~~a~~~~ 132 (230)
+|+|+-+.-.+.
T Consensus 333 ySfGADvlP~~~ 344 (456)
T COG3946 333 YSFGADVLPFAY 344 (456)
T ss_pred ecccchhhHHHH
Confidence 999998765443
No 166
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.73 E-value=1.2e-07 Score=69.22 Aligned_cols=99 Identities=21% Similarity=0.221 Sum_probs=74.9
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHH-HHHHHHHHHhhCCCCcEEEEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVED-VIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d-~~~~~~~l~~~~~~~~i~l~G 120 (230)
|+++++|+. ++....|..++..+... ..++..+.||.+..... ...+++ +...++.++..-+..++.|+|
T Consensus 1 ~pLF~fhp~---~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~-----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPA---GGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQP-----FASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCC---CCcHHHHHHHHHHhccC-ceeeccccCcccccccc-----cCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 479999997 78888999999999998 99999999998752211 111333 444666677777888999999
Q ss_pred ecchHHHHHHhhhc----ccceEEEEEcCCcch
Q 026965 121 SSAGAPIAGSAVDE----IEQVVGYVSLGYPFG 149 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~----~~~~~~~~~~~~~~~ 149 (230)
+|+||.+|..+|.+ ...+..++++..+..
T Consensus 72 ~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999988754 346777777765554
No 167
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.65 E-value=6.3e-07 Score=65.88 Aligned_cols=184 Identities=16% Similarity=0.033 Sum_probs=94.9
Q ss_pred CCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCC----CeEEEEeecccccCCCCCCCCCcccHHHH-HHHHHHHHhhC
Q 026965 37 NDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKG----FKAVTFDMRGVGRSTGKASLTGFAEVEDV-IAVCKWVSENL 111 (230)
Q Consensus 37 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g----~~v~~~d~~g~g~s~~~~~~~~~~~~~d~-~~~~~~l~~~~ 111 (230)
+..+.|+++++||-.+ .......+..+.|...| -.++.+|+-..-....... ........+ .+++=++.+.+
T Consensus 94 ~~~k~pvl~~~DG~~~--~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 94 PLEKYPVLYLQDGQDW--FRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred ccccccEEEEeccHHH--HhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccC
Confidence 3445899999998531 11222233444444433 4566666532100000000 000001222 22333444444
Q ss_pred CC----CcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhc---------ccccccccCCCCCEEEEecCCC
Q 026965 112 PT----NRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILF---------GRHHKAILKSPKPKLFVMGTRD 178 (230)
Q Consensus 112 ~~----~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~p~l~i~g~~D 178 (230)
+. ..-+|.|.|+||.+++.++..+|...+.|+..++.....-... .+.......-..-++...++.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~ 250 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDERIVLTTGGEEG 250 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhccCccceEEeecCCccc
Confidence 32 4468999999999999999999988888877655433221110 0111111111123344444555
Q ss_pred cccCHH-HHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 179 GFTSVK-QLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 179 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
.+.++. ...+.+++.+-+..+..|+| ||.+.. ++..+.+.++.++
T Consensus 251 ~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~---Wr~~l~~~L~~l~ 296 (299)
T COG2382 251 DFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAW---WRPALAEGLQLLL 296 (299)
T ss_pred cccchhHHHHHHHHhcCCcceeeecCC-CCchhH---hHHHHHHHHHHhh
Confidence 555543 44556666666789999998 998532 2225555555444
No 168
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.62 E-value=8e-06 Score=62.85 Aligned_cols=114 Identities=14% Similarity=0.082 Sum_probs=85.7
Q ss_pred CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhh-----------------------------------
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASIL----------------------------------- 155 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 155 (230)
.+.+++++.|.|==|..+...+...+++++++.+..........+
T Consensus 169 ~~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L 248 (367)
T PF10142_consen 169 VNIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKL 248 (367)
T ss_pred CCccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHH
Confidence 367899999999999999988888899999987653322111100
Q ss_pred --cccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 156 --FGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 156 --~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.-+......++++|.++|.|..|++..++.+.-.+.++.+.+.+..+|+++|.... . .+.+.+..|++.
T Consensus 249 ~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~---~~~~~l~~f~~~ 319 (367)
T PF10142_consen 249 MQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--S---DVVQSLRAFYNR 319 (367)
T ss_pred HHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--H---HHHHHHHHHHHH
Confidence 00111223467999999999999999999998888999888999999999999544 2 666667777653
No 169
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.61 E-value=1.1e-06 Score=62.80 Aligned_cols=163 Identities=16% Similarity=0.086 Sum_probs=93.5
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHH-HHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDV-IAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~-~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+....|..+...+... +.++.++.+|++.+..... ..+++ ....+.+....+..++.++|||+||.++...+.
T Consensus 10 ~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLPA-----SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCCC-----CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 5566788888888874 8999999999976543321 12332 223444445555678999999999999987665
Q ss_pred c----ccceEEEEEcCCcchhhhh------hh----c---------cc--------cc-----ccccCCCCCEEEEecCC
Q 026965 134 E----IEQVVGYVSLGYPFGMMAS------IL----F---------GR--------HH-----KAILKSPKPKLFVMGTR 177 (230)
Q Consensus 134 ~----~~~~~~~~~~~~~~~~~~~------~~----~---------~~--------~~-----~~~~~~~~p~l~i~g~~ 177 (230)
. ...+.+++++......... .. . .. .. -.-..+.+|+.++.+++
T Consensus 84 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (212)
T smart00824 84 RLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFGGWTPGPVAAPTLLVRASE 163 (212)
T ss_pred HHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhccCCCCCCCCCEEEEeccC
Confidence 3 2345555544321110000 00 0 00 00 00123567999999998
Q ss_pred Cccc-CHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHH
Q 026965 178 DGFT-SVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDF 226 (230)
Q Consensus 178 D~~~-~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~f 226 (230)
|... +......+........+++.++| +|+ +++. ....+...+..|
T Consensus 164 ~~~~~~~~~~~~W~~~~~~~~~~~~~~g-~H~~~~~~--~~~~~~~~~~~~ 211 (212)
T smart00824 164 PLAEWPDEDPDGWRAHWPLPHTVVDVPG-DHFTMMEE--HAAATARAVHDW 211 (212)
T ss_pred CCCCCCCCCcccccCCCCCCceeEEccC-chHHHHHH--hHHHHHHHHHhh
Confidence 8654 22222222222335688889995 888 4332 223666666555
No 170
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.61 E-value=2.7e-07 Score=66.54 Aligned_cols=86 Identities=19% Similarity=0.232 Sum_probs=46.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC--CCeEEEEeecccccCCCCCCCCCcccHHH-HHHHHHHHHhh---CC--
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK--GFKAVTFDMRGVGRSTGKASLTGFAEVED-VIAVCKWVSEN---LP-- 112 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~d-~~~~~~~l~~~---~~-- 112 (230)
...||++||. .++...|..+...+... .+.-..+...++...... ...+ ++. ...+++++.+. ..
T Consensus 4 ~hLvV~vHGL---~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-T~~g---I~~~g~rL~~eI~~~~~~~~~~ 76 (217)
T PF05057_consen 4 VHLVVFVHGL---WGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-TFDG---IDVCGERLAEEILEHIKDYESK 76 (217)
T ss_pred CEEEEEeCCC---CCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-cchh---hHHHHHHHHHHHHHhccccccc
Confidence 7799999998 67788888777777662 122111111111111101 1111 111 12233333332 22
Q ss_pred CCcEEEEEecchHHHHHHhhh
Q 026965 113 TNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
..++.++|||+||.++-.+..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 258999999999999986654
No 171
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.58 E-value=5.4e-06 Score=60.93 Aligned_cols=174 Identities=13% Similarity=0.132 Sum_probs=105.0
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCC--CcEEEEEe
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPT--NRILLVGS 121 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~--~~i~l~G~ 121 (230)
+|++-|| .+..........+...+.|+.++.+-.+-....... ......+..+++.+.+.... .++.+-.+
T Consensus 2 lvvl~gW--~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGW--MGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-----KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeC--CCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-----cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 5667787 366666666777777779999999876532211111 11123333345555443222 38999999
Q ss_pred cchHHHHHHhhh-----------cccceEEEEEcCCcchhhh-----hh--hcccc------------------------
Q 026965 122 SAGAPIAGSAVD-----------EIEQVVGYVSLGYPFGMMA-----SI--LFGRH------------------------ 159 (230)
Q Consensus 122 S~Gg~~a~~~~~-----------~~~~~~~~~~~~~~~~~~~-----~~--~~~~~------------------------ 159 (230)
|.||...+.... ..+++.+.|+=+.|..... .. .....
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYF 154 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 998888773322 1234677776554421100 00 00000
Q ss_pred --------------c--ccccCCCCCEEEEecCCCcccCHHHHHHHHHh---ccCceEEEEecCCCcc-cc-cChhhHHH
Q 026965 160 --------------H--KAILKSPKPKLFVMGTRDGFTSVKQLQNKLSS---AAGRVETHLIEGASHF-QM-EGPAYDAQ 218 (230)
Q Consensus 160 --------------~--~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~---~~~~~~~~~~~~~~H~-~~-~~~~~~~~ 218 (230)
. ......++|-++++++.|.+++.++.++..++ .+.+++...++++.|. .+ .+|+ +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~---~ 231 (240)
T PF05705_consen 155 IFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPD---R 231 (240)
T ss_pred HhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHH---H
Confidence 0 01113468999999999999999877654433 3446888999999999 43 4555 7
Q ss_pred HHHHHHHHH
Q 026965 219 MVNLILDFI 227 (230)
Q Consensus 219 ~~~~i~~fl 227 (230)
..+.+.+|+
T Consensus 232 Y~~~v~~fw 240 (240)
T PF05705_consen 232 YWRAVDEFW 240 (240)
T ss_pred HHHHHHhhC
Confidence 888887774
No 172
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.57 E-value=9.8e-07 Score=70.66 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=67.8
Q ss_pred CceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHH------------------HHHHhCCCeEEEE
Q 026965 16 GVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIA------------------SGLANKGFKAVTF 77 (230)
Q Consensus 16 g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~------------------~~l~~~g~~v~~~ 77 (230)
+..+.|+.+...+. ..+.|++|+++|+++ . ...+..+. -.+.+. .+++.+
T Consensus 60 ~~~lFyw~~~s~~~--------~~~~Pl~lwlnGGPG--~-ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~i 127 (462)
T PTZ00472 60 DKHYFYWAFGPRNG--------NPEAPVLLWMTGGPG--C-SSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYV 127 (462)
T ss_pred CceEEEEEEEcCCC--------CCCCCEEEEECCCCc--H-HHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEE
Confidence 56799999987643 123799999999963 2 22221111 012233 578999
Q ss_pred eec-ccccCCCCCCCCCc---ccHHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhhh
Q 026965 78 DMR-GVGRSTGKASLTGF---AEVEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 78 d~~-g~g~s~~~~~~~~~---~~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
|.| |+|.|......... ...+|+.++++...++ +...+++|+|+|+||..+..++.
T Consensus 128 DqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~ 190 (462)
T PTZ00472 128 DQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAY 190 (462)
T ss_pred eCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHH
Confidence 975 88888654322111 1256777777655544 34589999999999998876654
No 173
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.57 E-value=3.8e-06 Score=58.93 Aligned_cols=86 Identities=19% Similarity=0.161 Sum_probs=60.9
Q ss_pred ceeEEEECCCCCCCCC-chhhHHHHHHHHhCCCeEEEEeecc----cccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCc
Q 026965 41 SLAIVLVHPYSILGGC-QGLLKGIASGLANKGFKAVTFDMRG----VGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g----~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 115 (230)
...|||+-|.+. +-- ...-..+...|.+.+|..+-+.++. +|.++-.. ..+|+..+++.+...-....
T Consensus 36 ~~~vvfiGGLgd-gLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~------D~edl~~l~~Hi~~~~fSt~ 108 (299)
T KOG4840|consen 36 SVKVVFIGGLGD-GLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKD------DVEDLKCLLEHIQLCGFSTD 108 (299)
T ss_pred EEEEEEEcccCC-CccccccHHHHHHHHhhccceeeeeeccccccccccccccc------cHHHHHHHHHHhhccCcccc
Confidence 456888888641 222 2345667889999999999998763 44333222 26899999987766544569
Q ss_pred EEEEEecchHHHHHHhhh
Q 026965 116 ILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~ 133 (230)
|+++|||-|..-.+.++.
T Consensus 109 vVL~GhSTGcQdi~yYlT 126 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLT 126 (299)
T ss_pred eEEEecCccchHHHHHHH
Confidence 999999999998887663
No 174
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.52 E-value=6e-05 Score=58.25 Aligned_cols=47 Identities=19% Similarity=0.135 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhhCC----CCcEEEEEecchHHHHHHhhhcccceEEEEE
Q 026965 97 VEDVIAVCKWVSENLP----TNRILLVGSSAGAPIAGSAVDEIEQVVGYVS 143 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~----~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 143 (230)
+-|+..++.++...++ .-|++++|+|.||++|..++.-.|-....++
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~i 213 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVI 213 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEE
Confidence 3444445555544432 2389999999999999999987776555544
No 175
>COG3150 Predicted esterase [General function prediction only]
Probab=98.44 E-value=2.4e-05 Score=52.50 Aligned_cols=120 Identities=14% Similarity=0.063 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcch---hhhhhhccc-------cc-------
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFG---MMASILFGR-------HH------- 160 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~------- 160 (230)
..+.+.++.+..+.+.+...++|-|+||+.|.+++.+. .+++++ +.+... .+..++-.. .+
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~-Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI 120 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLC-GIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHI 120 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHh-CChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhH
Confidence 44555555555666666799999999999999988664 233333 222221 111111000 01
Q ss_pred -----ccccCCCC-CEEEEecCC-CcccCHHHHHHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHH
Q 026965 161 -----KAILKSPK-PKLFVMGTR-DGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFI 227 (230)
Q Consensus 161 -----~~~~~~~~-p~l~i~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl 227 (230)
..+..++. ..+++.... |++.+...+...+. .+..++.+|++|.+..-. .-.+.|..|.
T Consensus 121 ~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~----~~~~~V~dgg~H~F~~f~----~~l~~i~aF~ 186 (191)
T COG3150 121 ATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYH----PCYEIVWDGGDHKFKGFS----RHLQRIKAFK 186 (191)
T ss_pred HHHHHhhccccCCCcEEEeecccccHHHHHHHHHHHhh----hhhheeecCCCccccchH----HhHHHHHHHh
Confidence 12222333 355555555 99988776654443 466678889999865433 4455666664
No 176
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.44 E-value=5.8e-05 Score=55.00 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=55.9
Q ss_pred CCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchhhhhhhcccccccccCC-CCCEEEEecCC--Cc---ccCHH
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGMMASILFGRHHKAILKS-PKPKLFVMGTR--DG---FTSVK 184 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~l~i~g~~--D~---~~~~~ 184 (230)
.+.++-.++|||+||.+++.+....|...+...+.+|.-.+......+........ ..++.+..|.. |. ....+
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~e~~~~~~~~~~~ 213 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSGELDSSRSIRMAE 213 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEecccccCcchhhhhhh
Confidence 45678999999999999998887776666665555555444333333222222222 45555555544 22 22111
Q ss_pred ---HHH---HHHHh-ccCceEEEEecCCCcc
Q 026965 185 ---QLQ---NKLSS-AAGRVETHLIEGASHF 208 (230)
Q Consensus 185 ---~~~---~~~~~-~~~~~~~~~~~~~~H~ 208 (230)
.+. ..+++ ......+..+++.+|.
T Consensus 214 ~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~ 244 (264)
T COG2819 214 NKQEAAELSSLLEKRTGARLVFQEEPLEHHG 244 (264)
T ss_pred HHHHHHHHHHHHhhccCCceEeccccccccc
Confidence 111 12233 3445677778888887
No 177
>COG0627 Predicted esterase [General function prediction only]
Probab=98.36 E-value=2.1e-05 Score=59.58 Aligned_cols=166 Identities=19% Similarity=0.159 Sum_probs=86.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec--ccc------------cCCCCCCCC-----C-ccc----
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR--GVG------------RSTGKASLT-----G-FAE---- 96 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~--g~g------------~s~~~~~~~-----~-~~~---- 96 (230)
-|+++++||..+..........+-+.....|+.++++|-. +.+ .+-...... . +..
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 7899999997421112223345566667778888887432 211 111111000 0 111
Q ss_pred HHHHHHHHHHHHhhCC--C--CcEEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh---------hh--------h
Q 026965 97 VEDVIAVCKWVSENLP--T--NRILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM---------AS--------I 154 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~--~--~~i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~---------~~--------~ 154 (230)
.+++.. .+.+..+ . ++..++||||||+-|+.+|.++ .++..+..+++..... .. .
T Consensus 134 ~~ELP~---~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~ 210 (316)
T COG0627 134 TQELPA---LWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNA 210 (316)
T ss_pred HhhhhH---HHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHH
Confidence 222222 2222322 1 2789999999999999888777 4555554444332221 00 0
Q ss_pred hcccc-------c---cccc----C----------CCCCEEEEecCCCcccC-----HHHHHHHHHhccCceEEEEecCC
Q 026965 155 LFGRH-------H---KAIL----K----------SPKPKLFVMGTRDGFTS-----VKQLQNKLSSAAGRVETHLIEGA 205 (230)
Q Consensus 155 ~~~~~-------~---~~~~----~----------~~~p~l~i~g~~D~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 205 (230)
.+... . ..+. + ...++++-+|..|.+.. .....+.+.+..-+..+...+++
T Consensus 211 ~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G 290 (316)
T COG0627 211 MLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGG 290 (316)
T ss_pred hcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCCC
Confidence 01100 0 0111 1 33567777888887765 33334445555556777777889
Q ss_pred Cccc
Q 026965 206 SHFQ 209 (230)
Q Consensus 206 ~H~~ 209 (230)
+|.+
T Consensus 291 ~Hsw 294 (316)
T COG0627 291 DHSW 294 (316)
T ss_pred CcCH
Confidence 9984
No 178
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.34 E-value=3.1e-06 Score=65.08 Aligned_cols=101 Identities=25% Similarity=0.306 Sum_probs=72.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCe---EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFK---AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~ 117 (230)
.-+++++||+ +.....+..+...+...|+. +..+++++. .. ........+.+...++.+....+.+++.
T Consensus 59 ~~pivlVhG~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~----~~~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGL---GGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DG----TYSLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccC---cCCcchhhhhhhhhcchHHHhccccccccccc-CC----CccccccHHHHHHHHHHHHhhcCCCceE
Confidence 4579999997 56677778777778777777 788877644 11 1111222455666666666667789999
Q ss_pred EEEecchHHHHHHhhhccc---ceEEEEEcCCcch
Q 026965 118 LVGSSAGAPIAGSAVDEIE---QVVGYVSLGYPFG 149 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~~~---~~~~~~~~~~~~~ 149 (230)
++|||+||..+..++...+ .+...+.++.|-.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999999998877655 6888888876644
No 179
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.28 E-value=2.7e-06 Score=68.05 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=62.3
Q ss_pred ceeEEEECCCCCCCCCchh---hHHHHHHHHh-CCCeEEEEeecccccCCCCCCCCCc--------ccHHHHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGL---LKGIASGLAN-KGFKAVTFDMRGVGRSTGKASLTGF--------AEVEDVIAVCKWVS 108 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~---~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~~~~~--------~~~~d~~~~~~~l~ 108 (230)
.|++|++-|- +.... ...+...|++ .|-.++++++|.+|.|.+....... +.++|+...++++.
T Consensus 29 gpifl~~ggE----~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~ 104 (434)
T PF05577_consen 29 GPIFLYIGGE----GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVK 104 (434)
T ss_dssp SEEEEEE--S----S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC----CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHH
Confidence 6777777553 22221 1224444544 4788999999999999865432221 12788999999888
Q ss_pred hhC---CCCcEEEEEecchHHHHHHhhhcccceE-EEEEcCCcc
Q 026965 109 ENL---PTNRILLVGSSAGAPIAGSAVDEIEQVV-GYVSLGYPF 148 (230)
Q Consensus 109 ~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~-~~~~~~~~~ 148 (230)
.++ +..|++++|-|+||.+|.++-.++|.+. +.+.-+.|.
T Consensus 105 ~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 105 KKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred HhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 664 3468999999999999999988777654 445444443
No 180
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.21 E-value=6.1e-05 Score=52.67 Aligned_cols=105 Identities=13% Similarity=0.110 Sum_probs=66.1
Q ss_pred ceeEEEECCCCCCCCCchhh---------------HHHHHHHHhCCCeEEEEeecc---cccCCCCCCCCCcccHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLL---------------KGIASGLANKGFKAVTFDMRG---VGRSTGKASLTGFAEVEDVIA 102 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~---------------~~~~~~l~~~g~~v~~~d~~g---~g~s~~~~~~~~~~~~~d~~~ 102 (230)
...+|++||.|- -....| .++.+...+.||.|++.+.-- +-.+...+.......++.+..
T Consensus 101 ~kLlVLIHGSGv--VrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 101 QKLLVLIHGSGV--VRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred cceEEEEecCce--EecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 678999999751 122233 244566667799999887421 112222222222233666666
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc---ceEEEEEcCCc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE---QVVGYVSLGYP 147 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~---~~~~~~~~~~~ 147 (230)
+...+......+.++++.||.||...+.+..+.+ .+.++.+-..+
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 6666666667789999999999999998887654 45555554444
No 181
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.06 E-value=3.8e-05 Score=63.40 Aligned_cols=108 Identities=25% Similarity=0.301 Sum_probs=69.8
Q ss_pred eeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh--HHHHHHHHhCCCeEEEEeecc--cc-cCCCCCCCCC
Q 026965 19 LNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL--KGIASGLANKGFKAVTFDMRG--VG-RSTGKASLTG 93 (230)
Q Consensus 19 l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g--~g-~s~~~~~~~~ 93 (230)
|+.-+|.|.... .+. .|++|++||++...++...+ ......+..+...|+.+++|- .| .+.+.....+
T Consensus 97 LylNV~tp~~~~------~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~g 169 (545)
T KOG1516|consen 97 LYLNVYTPQGCS------ESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPG 169 (545)
T ss_pred ceEEEeccCCCc------cCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCC
Confidence 667778887652 112 79999999997544443333 222334444467788888872 12 1222222233
Q ss_pred cccHHHHHHHHHHHHhhC-----CCCcEEEEEecchHHHHHHhhh
Q 026965 94 FAEVEDVIAVCKWVSENL-----PTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 94 ~~~~~d~~~~~~~l~~~~-----~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
..-..|...+++|+.+.+ +.++|.++|||.||..+..+..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 333679999999998863 5789999999999999876553
No 182
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=1.6e-05 Score=65.61 Aligned_cols=103 Identities=20% Similarity=0.272 Sum_probs=58.7
Q ss_pred CceeEEEECCCCCCCCCchhhHHHHHHHHh----------------CCCeEEEEeecccccCCCCCCCCCcccHHHHHHH
Q 026965 40 SSLAIVLVHPYSILGGCQGLLKGIASGLAN----------------KGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAV 103 (230)
Q Consensus 40 ~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~ 103 (230)
++-+|+|++|. .++..+.+.++..... ..++.+++|+-+ +-..-....-....+.+.++
T Consensus 88 sGIPVLFIPGN---AGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE--e~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGN---AGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE--EFTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCC---CCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc--hhhhhccHhHHHHHHHHHHH
Confidence 36789999997 6777777776655542 134556666531 00000000001114555555
Q ss_pred HHHHHhhC------C---CCcEEEEEecchHHHHHHhhhcccce----EEEEEcCCc
Q 026965 104 CKWVSENL------P---TNRILLVGSSAGAPIAGSAVDEIEQV----VGYVSLGYP 147 (230)
Q Consensus 104 ~~~l~~~~------~---~~~i~l~G~S~Gg~~a~~~~~~~~~~----~~~~~~~~~ 147 (230)
++++.+.+ + +..|+++||||||.+|...+.....+ ..++..+.|
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 66655432 2 34599999999999999877654333 334444444
No 183
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.05 E-value=3.2e-05 Score=52.66 Aligned_cols=80 Identities=19% Similarity=0.133 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-----cceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEE
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-----EQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFV 173 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i 173 (230)
.+...++....+.+..++.++|||+||.+|..++... .....++.+++|......... ..........+..+
T Consensus 13 ~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~---~~~~~~~~~~~~~i 89 (153)
T cd00741 13 LVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAE---DRLDPSDALFVDRI 89 (153)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHH---HhhhccCCccEEEE
Confidence 3444444444446788999999999999999777543 246667777776644332211 01112234578888
Q ss_pred ecCCCccc
Q 026965 174 MGTRDGFT 181 (230)
Q Consensus 174 ~g~~D~~~ 181 (230)
+...|.+.
T Consensus 90 ~~~~D~v~ 97 (153)
T cd00741 90 VNDNDIVP 97 (153)
T ss_pred EECCCccC
Confidence 88888764
No 184
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.05 E-value=4.9e-05 Score=54.00 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=47.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeE-EEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKA-VTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v-~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
...|||+.|+ +.+...+..+. ...++.+ +++|||..-. |. + + + ..++|.|+
T Consensus 11 ~~LilfF~GW---g~d~~~f~hL~---~~~~~D~l~~yDYr~l~~--------------d~----~-~-~--~y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGW---GMDPSPFSHLI---LPENYDVLICYDYRDLDF--------------DF----D-L-S--GYREIYLV 62 (213)
T ss_pred CeEEEEEecC---CCChHHhhhcc---CCCCccEEEEecCccccc--------------cc----c-c-c--cCceEEEE
Confidence 5789999998 55554443332 2335665 5677763210 00 0 1 1 35789999
Q ss_pred EecchHHHHHHhhhcccceEEEEEcCCc
Q 026965 120 GSSAGAPIAGSAVDEIEQVVGYVSLGYP 147 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~~~~~~~~~~~~~ 147 (230)
++|||-.+|..+....+-..++++.+.+
T Consensus 63 AWSmGVw~A~~~l~~~~~~~aiAINGT~ 90 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGIPFKRAIAINGTP 90 (213)
T ss_pred EEeHHHHHHHHHhccCCcceeEEEECCC
Confidence 9999999998876654433444444433
No 185
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.99 E-value=4.4e-05 Score=48.12 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=46.1
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccc-cChhhHHHHHHHHHHHHh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQM-EGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~-~~~~~~~~~~~~i~~fl~ 228 (230)
..|+|++.++.|+.+|.+.++...+++ ++.+++.+++.||..+ .... -+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~---C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSP---CVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCCh---HHHHHHHHHHH
Confidence 589999999999999999998655554 5689999999999944 3323 56677778875
No 186
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.96 E-value=2.6e-05 Score=61.38 Aligned_cols=85 Identities=15% Similarity=0.270 Sum_probs=59.2
Q ss_pred hhHHHHHHHHhCCCeE-----EE-EeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 59 LLKGIASGLANKGFKA-----VT-FDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v-----~~-~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
.|..+++.|.+.||.. .+ +|+|-.- . ........++..++.+...- .++++|+||||||.++..++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~------~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP------A-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch------h-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHH
Confidence 6889999999988752 22 5776211 1 11111466777777665554 78999999999999999777
Q ss_pred hcc-------cceEEEEEcCCcchhh
Q 026965 133 DEI-------EQVVGYVSLGYPFGMM 151 (230)
Q Consensus 133 ~~~-------~~~~~~~~~~~~~~~~ 151 (230)
... ..+.++|.+++|+...
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCC
Confidence 543 3588999999887653
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.88 E-value=0.00021 Score=55.03 Aligned_cols=99 Identities=15% Similarity=0.075 Sum_probs=66.5
Q ss_pred eeEEEECCCCCCCCCchhhHH---HH-HHHHhCCCeEEEEeecccccCCCCCCCC-------C----cccHHHHHHHHHH
Q 026965 42 LAIVLVHPYSILGGCQGLLKG---IA-SGLANKGFKAVTFDMRGVGRSTGKASLT-------G----FAEVEDVIAVCKW 106 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~---~~-~~l~~~g~~v~~~d~~g~g~s~~~~~~~-------~----~~~~~d~~~~~~~ 106 (230)
.+|+|.-|. -++...+.. +. +.-.+.+-.++.+++|.+|+|-+--... + .+...|.+.++..
T Consensus 81 gPIffYtGN---EGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGN---EGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCC---cccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 467777775 344333321 22 2223346778999999999987533221 1 1127888888888
Q ss_pred HHhhCC--CCcEEEEEecchHHHHHHhhhcccceEEEEE
Q 026965 107 VSENLP--TNRILLVGSSAGAPIAGSAVDEIEQVVGYVS 143 (230)
Q Consensus 107 l~~~~~--~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 143 (230)
++..+. ..+++.+|-|+||+++.+.-.++|.+...++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAl 196 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGAL 196 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhh
Confidence 887643 4689999999999999999888887654433
No 188
>PLN02606 palmitoyl-protein thioesterase
Probab=97.86 E-value=0.0002 Score=53.47 Aligned_cols=100 Identities=25% Similarity=0.374 Sum_probs=60.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHh--hCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSE--NLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~--~~~~~~i~ 117 (230)
..+||++||.+.. .....+..+.+.+.+. |+.+.++. .|-+. ...... ..-+.+..+.+.+.. .+. +-+.
T Consensus 26 ~~PvViwHGlgD~-~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~-~~~~Qv~~vce~l~~~~~L~-~G~n 98 (306)
T PLN02606 26 SVPFVLFHGFGGE-CSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFM-PLRQQASIACEKIKQMKELS-EGYN 98 (306)
T ss_pred CCCEEEECCCCcc-cCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---cccccc-CHHHHHHHHHHHHhcchhhc-CceE
Confidence 4578899998632 3445777788887533 66666655 22111 111111 112334444444433 222 3589
Q ss_pred EEEecchHHHHHHhhhcc---cceEEEEEcCCc
Q 026965 118 LVGSSAGAPIAGSAVDEI---EQVVGYVSLGYP 147 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~~---~~~~~~~~~~~~ 147 (230)
++|+|+||.++-.++++- |.+..+|.+++|
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999888764 458899988754
No 189
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.84 E-value=3.7e-05 Score=56.69 Aligned_cols=103 Identities=21% Similarity=0.283 Sum_probs=46.6
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC--CCeEEEEeecccccCCCCCCCCCc-ccH-HHHHHHHHHHHhh--CCCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK--GFKAVTFDMRGVGRSTGKASLTGF-AEV-EDVIAVCKWVSEN--LPTN 114 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~-~~~-~d~~~~~~~l~~~--~~~~ 114 (230)
..+||+.||.+....+...+..+.+.+.+. |..|.+++.- -+.++ .....+ ..+ +.+..+.+.+... +. +
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~--D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~ 80 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSE--DVENSFFGNVNDQVEQVCEQLANDPELA-N 80 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHH--HHHHHHHSHHHHHHHHHHHHHHH-GGGT-T
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcch--hhhhhHHHHHHHHHHHHHHHHhhChhhh-c
Confidence 567899999863322333455554444432 6667777652 11110 000010 001 1222222322221 22 4
Q ss_pred cEEEEEecchHHHHHHhhhcc--cceEEEEEcCCc
Q 026965 115 RILLVGSSAGAPIAGSAVDEI--EQVVGYVSLGYP 147 (230)
Q Consensus 115 ~i~l~G~S~Gg~~a~~~~~~~--~~~~~~~~~~~~ 147 (230)
-+.++|+|+||.++-.++++. +.+..+|.+++|
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 699999999999999888764 678999998765
No 190
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.81 E-value=0.0031 Score=45.74 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=82.4
Q ss_pred eEEEECCCCCCCCC-chhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCc--ccHHHHHHHHHHHHhhCC--C--Cc
Q 026965 43 AIVLVHPYSILGGC-QGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGF--AEVEDVIAVCKWVSENLP--T--NR 115 (230)
Q Consensus 43 ~vi~~hG~~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~--~~~~d~~~~~~~l~~~~~--~--~~ 115 (230)
.||.+=|+.+.+.. .-.|..+.+.|+++||.|++.-+.- + .+.... ...+.+...++.+.+..+ . -+
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP 91 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPAYLP 91 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCC
Confidence 45544454433333 3468899999999999999986641 0 000000 002334445555544322 1 36
Q ss_pred EEEEEecchHHHHHHhhhcc-cceEEEEEcCCcchhh-hhhh------------ccccccc----c--cCCCCCEEEEec
Q 026965 116 ILLVGSSAGAPIAGSAVDEI-EQVVGYVSLGYPFGMM-ASIL------------FGRHHKA----I--LKSPKPKLFVMG 175 (230)
Q Consensus 116 i~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~----~--~~~~~p~l~i~g 175 (230)
++-+|||+|+-+-+.+.... .+..+.++++..-... .... +.....+ + .-....+++|-=
T Consensus 92 ~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET~~li~~~Y~~~rnLLIkF 171 (250)
T PF07082_consen 92 VYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEETRRLIRESYQVRRNLLIKF 171 (250)
T ss_pred eeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHHHHHHHHhcCCccceEEEe
Confidence 78899999999988766543 2334444443211100 0000 0000000 0 011234677887
Q ss_pred CCCcccCHHHHHHHHHhccCc-eEEEEecCCCcc
Q 026965 176 TRDGFTSVKQLQNKLSSAAGR-VETHLIEGASHF 208 (230)
Q Consensus 176 ~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~H~ 208 (230)
.+|.+=......+.++...++ .+....+| +|.
T Consensus 172 ~~D~iDqt~~L~~~L~~r~~~~~~~~~L~G-~HL 204 (250)
T PF07082_consen 172 NDDDIDQTDELEQILQQRFPDMVSIQTLPG-NHL 204 (250)
T ss_pred cCCCccchHHHHHHHhhhccccceEEeCCC-CCC
Confidence 788774444444444444333 56677884 887
No 191
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.78 E-value=0.00062 Score=48.18 Aligned_cols=54 Identities=24% Similarity=0.339 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhhCCC-CcEEEEEecchHHHHHHhhhcc-------cceEEEEEcCCcchh
Q 026965 97 VEDVIAVCKWVSENLPT-NRILLVGSSAGAPIAGSAVDEI-------EQVVGYVSLGYPFGM 150 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~-------~~~~~~~~~~~~~~~ 150 (230)
..|+.++.++..++.+. ++++|+|||+|+.+...+++.. .++.++-+++.+...
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYPVTV 138 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCccccH
Confidence 68899988888787755 5899999999999999888642 345566666666544
No 192
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.76 E-value=0.00061 Score=50.98 Aligned_cols=100 Identities=20% Similarity=0.287 Sum_probs=60.2
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHh--hCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSE--NLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~--~~~~~~i~ 117 (230)
..++|+.||.|... +......+.+.+.+. |..+.++.. |.+. ...... ..-+.+..+.+.+.. .+. +-+.
T Consensus 25 ~~P~ViwHG~GD~c-~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~s~~~-~~~~Qve~vce~l~~~~~l~-~G~n 97 (314)
T PLN02633 25 SVPFIMLHGIGTQC-SDATNANFTQLLTNLSGSPGFCLEI---GNGV-GDSWLM-PLTQQAEIACEKVKQMKELS-QGYN 97 (314)
T ss_pred CCCeEEecCCCccc-CCchHHHHHHHHHhCCCCceEEEEE---CCCc-ccccee-CHHHHHHHHHHHHhhchhhh-CcEE
Confidence 45688999997433 333566677777543 666766654 3331 111111 112333344444433 222 3599
Q ss_pred EEEecchHHHHHHhhhcc---cceEEEEEcCCc
Q 026965 118 LVGSSAGAPIAGSAVDEI---EQVVGYVSLGYP 147 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~~---~~~~~~~~~~~~ 147 (230)
++|||+||.++-.++++- |.+..+|.+++|
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999888754 458999988755
No 193
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=0.00051 Score=49.94 Aligned_cols=101 Identities=19% Similarity=0.217 Sum_probs=61.5
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh-CCCCcEEEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN-LPTNRILLV 119 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i~l~ 119 (230)
.++|++||.+.. .+...+..+.+.+.+. |..+.+.|. |-| ..........+.+..+.+.+... .-.+-+.++
T Consensus 24 ~P~ii~HGigd~-c~~~~~~~~~q~l~~~~g~~v~~lei-g~g----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyniv 97 (296)
T KOG2541|consen 24 VPVIVWHGIGDS-CSSLSMANLTQLLEELPGSPVYCLEI-GDG----IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIV 97 (296)
T ss_pred CCEEEEeccCcc-cccchHHHHHHHHHhCCCCeeEEEEe-cCC----cchhhhccHHHHHHHHHHHHhcchhccCceEEE
Confidence 568999998632 2224467777777765 788888886 333 00111111112333333333321 113568999
Q ss_pred EecchHHHHHHhhhc--ccceEEEEEcCCcc
Q 026965 120 GSSAGAPIAGSAVDE--IEQVVGYVSLGYPF 148 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~--~~~~~~~~~~~~~~ 148 (230)
|.|+||.++-.+++. .|.++.+|.+++|-
T Consensus 98 g~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 98 GYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999988763 37788899887653
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.65 E-value=9.8e-05 Score=59.77 Aligned_cols=90 Identities=11% Similarity=0.093 Sum_probs=55.8
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCC---CCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKA---SLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
.|..+.+.|++.||. --++.+....-+.. ..........++..++.+...-+.++++|+||||||.+++.++...
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 458899999999986 23333322111111 0000111466777777776654568999999999999999766421
Q ss_pred ----------------cceEEEEEcCCcchh
Q 026965 136 ----------------EQVVGYVSLGYPFGM 150 (230)
Q Consensus 136 ----------------~~~~~~~~~~~~~~~ 150 (230)
..|...|.+++|+..
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCC
Confidence 235667777766543
No 195
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.60 E-value=0.00045 Score=55.07 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=45.6
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhcc-----------------------Cc-eEEEEecCCCcccccChhhHHHHHHH
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAA-----------------------GR-VETHLIEGASHFQMEGPAYDAQMVNL 222 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 222 (230)
.+++|+..|+.|.+|+.-..+.+++++. .+ ..++.+.++||....+|+ ...+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~---~al~m 423 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPN---ETFIM 423 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHH---HHHHH
Confidence 5799999999999999777665554331 12 567788899999545676 88999
Q ss_pred HHHHHhh
Q 026965 223 ILDFIAS 229 (230)
Q Consensus 223 i~~fl~~ 229 (230)
+..|++.
T Consensus 424 ~~~Fi~~ 430 (433)
T PLN03016 424 FQRWISG 430 (433)
T ss_pred HHHHHcC
Confidence 9999864
No 196
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.58 E-value=0.00023 Score=47.54 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+.+.+.++.+.++.+..++.+.|||+||.+|..++.
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHH
Confidence 345555555566667789999999999999997664
No 197
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.55 E-value=0.00056 Score=38.60 Aligned_cols=51 Identities=20% Similarity=0.263 Sum_probs=28.9
Q ss_pred ccceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh
Q 026965 3 SYSVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL 60 (230)
Q Consensus 3 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~ 60 (230)
++..|+..+.+.||..|..+...+++... ....++|+|++.||. .+++..|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~----~~~~~k~pVll~HGL---~~ss~~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSS----NQNKKKPPVLLQHGL---LQSSDDW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCT----TTTTT--EEEEE--T---T--GGGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCc----ccCCCCCcEEEECCc---ccChHHH
Confidence 57889999999999999988887765210 234458999999997 4555544
No 198
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.54 E-value=0.0035 Score=48.70 Aligned_cols=98 Identities=14% Similarity=0.090 Sum_probs=68.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcc----cHHHHHHHHHHHHhhCCCCcE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFA----EVEDVIAVCKWVSENLPTNRI 116 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~----~~~d~~~~~~~l~~~~~~~~i 116 (230)
.|+|++.-|++ ...........+.|. -+-+.+++|.++.|.+.+.....- ...|.-++++.++..++ ++.
T Consensus 63 rPtV~~T~GY~--~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~-~kW 136 (448)
T PF05576_consen 63 RPTVLYTEGYN--VSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP-GKW 136 (448)
T ss_pred CCeEEEecCcc--cccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-CCc
Confidence 78899999985 222333344555553 468999999999998877544332 26777778877776664 579
Q ss_pred EEEEecchHHHHHHhhhcc-cceEEEEEc
Q 026965 117 LLVGSSAGAPIAGSAVDEI-EQVVGYVSL 144 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~~~-~~~~~~~~~ 144 (230)
+--|.|=||+.++..=..+ .++.+.|.-
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 9999999999998776654 455555543
No 199
>PLN02209 serine carboxypeptidase
Probab=97.53 E-value=0.00081 Score=53.66 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=45.4
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhcc-----------------------Cc-eEEEEecCCCcccccChhhHHHHHHH
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAA-----------------------GR-VETHLIEGASHFQMEGPAYDAQMVNL 222 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 222 (230)
.+++|+..|+.|.+|+.-..+.+...+. .+ ..++.+.++||....+|+ +..+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~---~al~m 427 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPE---ESSIM 427 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHH---HHHHH
Confidence 4799999999999999766665544331 22 567778899999545776 88899
Q ss_pred HHHHHhh
Q 026965 223 ILDFIAS 229 (230)
Q Consensus 223 i~~fl~~ 229 (230)
+.+|+..
T Consensus 428 ~~~fi~~ 434 (437)
T PLN02209 428 FQRWISG 434 (437)
T ss_pred HHHHHcC
Confidence 9999864
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.49 E-value=0.0073 Score=41.93 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhhC-CCCcEEEEEecchHHHHHHhhhc-ccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEe
Q 026965 97 VEDVIAVCKWVSENL-PTNRILLVGSSAGAPIAGSAVDE-IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVM 174 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~ 174 (230)
..++..+++-|.... +..++.++|||+|+.++..++.. ...+..++++++|-.... ....+.--...++...
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~------~a~~l~~~~~~v~a~~ 164 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVD------SASDLGVPPGHVYAMT 164 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCC------CHHHcCCCCCcEEEee
Confidence 455666666665544 56789999999999999988877 567778888887754321 1112211135688888
Q ss_pred cCCCccc
Q 026965 175 GTRDGFT 181 (230)
Q Consensus 175 g~~D~~~ 181 (230)
+..|++-
T Consensus 165 a~~D~I~ 171 (177)
T PF06259_consen 165 APGDPIA 171 (177)
T ss_pred CCCCCcc
Confidence 8888764
No 201
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.39 E-value=0.00017 Score=56.49 Aligned_cols=76 Identities=11% Similarity=0.060 Sum_probs=51.2
Q ss_pred hhhHHHHHHHHhCCCe------EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 58 GLLKGIASGLANKGFK------AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~------v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
..|..+.+.|...||. -..+|+|-.- ... .........++..++...+..+.++++|++||||+.+.+..
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~~~-e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY---HNS-EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc---CCh-hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 4678888999988886 3456766211 001 11111146666777766666677999999999999999988
Q ss_pred hhcccc
Q 026965 132 VDEIEQ 137 (230)
Q Consensus 132 ~~~~~~ 137 (230)
+...+.
T Consensus 200 l~w~~~ 205 (473)
T KOG2369|consen 200 LKWVEA 205 (473)
T ss_pred Hhcccc
Confidence 876544
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.38 E-value=0.0018 Score=45.29 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-------ccceEEEEEcCCcchhhhhhhcccccccccCCCCC
Q 026965 97 VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-------IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKP 169 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 169 (230)
..++...++....+=+..+++|+|+|+|+.++..++.. ..++.++++++.|....... .......-+
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~------~~~~~~~~~ 137 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP------GIPGDYSDR 137 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT------TBTCSCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc------ccCcccccc
Confidence 45566666555566677899999999999999977654 25788999998887632222 111122345
Q ss_pred EEEEecCCCcccC
Q 026965 170 KLFVMGTRDGFTS 182 (230)
Q Consensus 170 ~l~i~g~~D~~~~ 182 (230)
++-+.-..|.++.
T Consensus 138 ~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 138 VRSYCNPGDPVCD 150 (179)
T ss_dssp EEEE-BTT-GGGG
T ss_pred eeEEcCCCCcccC
Confidence 7788888898884
No 203
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.35 E-value=0.00073 Score=54.44 Aligned_cols=86 Identities=21% Similarity=0.224 Sum_probs=57.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHH-hCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh---C--CCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLA-NKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN---L--PTN 114 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~---~--~~~ 114 (230)
+-.|+.+||+|+...+........+.++ +.|+.++.+||.-.-+.+ .....+++.-+.-|+.+. + -.+
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP------FPRaleEv~fAYcW~inn~allG~TgE 469 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP------FPRALEEVFFAYCWAINNCALLGSTGE 469 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC------CCcHHHHHHHHHHHHhcCHHHhCcccc
Confidence 6689999999876666655554444443 348999999986332222 222246666666666553 3 357
Q ss_pred cEEEEEecchHHHHHHhh
Q 026965 115 RILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 115 ~i~l~G~S~Gg~~a~~~~ 132 (230)
||+++|-|.||.+.+.++
T Consensus 470 riv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 470 RIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred eEEEeccCCCcceeehhH
Confidence 999999999999766443
No 204
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.34 E-value=0.0043 Score=49.25 Aligned_cols=104 Identities=12% Similarity=0.113 Sum_probs=70.3
Q ss_pred ceeEEEECCCCCCCCCchhh-----HHHHHHHHhCCCeEEEEeecccccCCCCCCCCCc--------ccHHHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLL-----KGIASGLANKGFKAVTFDMRGVGRSTGKASLTGF--------AEVEDVIAVCKWV 107 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~--------~~~~d~~~~~~~l 107 (230)
.|..|+|-|=+ .....| ..+.....+.|-.|+..++|-+|.|.+....... +.+.|+..+|+.+
T Consensus 86 gPiFLmIGGEg---p~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 86 GPIFLMIGGEG---PESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CceEEEEcCCC---CCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 77888887753 222222 2344455556889999999999988654433221 2267888888777
Q ss_pred HhhCC---CCcEEEEEecchHHHHHHhhhcccceE-EEEEcCCc
Q 026965 108 SENLP---TNRILLVGSSAGAPIAGSAVDEIEQVV-GYVSLGYP 147 (230)
Q Consensus 108 ~~~~~---~~~i~l~G~S~Gg~~a~~~~~~~~~~~-~~~~~~~~ 147 (230)
..+.+ ..+++.+|-|+-|.++.+.-..+|++. +.+.-+.|
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 66643 248999999999999998887776654 44444444
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.31 E-value=0.002 Score=46.98 Aligned_cols=52 Identities=21% Similarity=0.303 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc-----cceEEEEEcCCcch
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI-----EQVVGYVSLGYPFG 149 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-----~~~~~~~~~~~~~~ 149 (230)
.++...+..+.++.+..++.+.|||+||.+|..++... .....++.++.|..
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 34444444455556778999999999999999766431 22344555555443
No 206
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.15 E-value=0.003 Score=50.38 Aligned_cols=113 Identities=17% Similarity=0.210 Sum_probs=64.9
Q ss_pred ecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHH--------HHHh------CCCeEEEE
Q 026965 12 ETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIAS--------GLAN------KGFKAVTF 77 (230)
Q Consensus 12 ~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~--------~l~~------~g~~v~~~ 77 (230)
....+..|.|+.+..... ..+.|+||++.|+++..+-...+..+.+ .|.. +-.+++..
T Consensus 52 ~~~~~~~LFYwf~eS~~~--------P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 52 NESEGRQLFYWFFESENN--------PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFL 123 (454)
T ss_pred CCCCCceEEEEEEEccCC--------CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEE
Confidence 334678999999877543 2238899999999732222222221111 1111 11468888
Q ss_pred eec-ccccCCCCCCC--C--CcccHHHHHHHH-HHHHh--hCCCCcEEEEEecchHHHHHHhh
Q 026965 78 DMR-GVGRSTGKASL--T--GFAEVEDVIAVC-KWVSE--NLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 78 d~~-g~g~s~~~~~~--~--~~~~~~d~~~~~-~~l~~--~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
|.| |.|-|-..... . .....+|.-.++ +|+.. ++..++++|.|-|.+|...-.+|
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La 186 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALA 186 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHH
Confidence 877 67766533321 1 111134444433 44433 25678999999999997766555
No 207
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.08 E-value=0.0019 Score=46.78 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc-----ccceEEEEEcCCcc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE-----IEQVVGYVSLGYPF 148 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~-----~~~~~~~~~~~~~~ 148 (230)
....+.++.+.+.++. ++.+.|||.||.+|..++.. .+++..+....+|-
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3344445555455544 59999999999999977754 24677777766553
No 208
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.96 E-value=0.0016 Score=45.22 Aligned_cols=63 Identities=22% Similarity=0.334 Sum_probs=49.8
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHh---cc-CceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSS---AA-GRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
+++++-|-|+.|.++.+.++.....- +. .....++.+|+||+ .+..+.+.+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 56888899999999998887642222 11 13566788999999 888888999999999999975
No 209
>PLN02454 triacylglycerol lipase
Probab=96.93 E-value=0.0015 Score=51.18 Aligned_cols=37 Identities=30% Similarity=0.320 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhCCCCc--EEEEEecchHHHHHHhhh
Q 026965 97 VEDVIAVCKWVSENLPTNR--ILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~--i~l~G~S~Gg~~a~~~~~ 133 (230)
.+++...++.+.+.++..+ |++.|||+||++|+.+|.
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 3455566666666666554 999999999999997773
No 210
>PLN00413 triacylglycerol lipase
Probab=96.89 E-value=0.0029 Score=50.26 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
.+...++.+.++.+..++++.|||+||++|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45555666666777789999999999999997763
No 211
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.86 E-value=0.046 Score=40.73 Aligned_cols=63 Identities=21% Similarity=0.296 Sum_probs=46.5
Q ss_pred CCCEEEEecCCCcccCHHHHHH---HHHhccC-ceEEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQN---KLSSAAG-RVETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
++-.+-+-|++|.+....+.+. +...... ..+...-|+.||+ .++...++++++-.|++|+.+
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~ 406 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRR 406 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHH
Confidence 4567889999999987666553 2222221 2456778999999 788788888999999999875
No 212
>PLN02934 triacylglycerol lipase
Probab=96.73 E-value=0.0046 Score=49.56 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
..+...++.+.++.+..++++.|||+||++|..++
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA 339 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFP 339 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHH
Confidence 34566666666777788999999999999999776
No 213
>PLN02162 triacylglycerol lipase
Probab=96.56 E-value=0.0042 Score=49.27 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
..+.+.++.+..+.+..++++.|||+||++|..++
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaA 296 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFP 296 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHH
Confidence 34455555555566777999999999999999765
No 214
>PLN02571 triacylglycerol lipase
Probab=96.52 E-value=0.0039 Score=48.92 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPTN--RILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~--~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++...++.+.+.++.. +|++.|||+||++|+.+|.
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHH
Confidence 44555555555555443 6899999999999997664
No 215
>PLN02408 phospholipase A1
Probab=96.48 E-value=0.0046 Score=47.81 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhCCCC--cEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPTN--RILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~--~i~l~G~S~Gg~~a~~~~~ 133 (230)
+.+.+.+..+.+.++.. +|.+.|||+||++|..++.
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHH
Confidence 34455555555555543 5999999999999997764
No 216
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.46 E-value=0.0067 Score=41.28 Aligned_cols=110 Identities=19% Similarity=0.169 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceE-EEEEcCCcchhh--------------------hhhh
Q 026965 97 VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVV-GYVSLGYPFGMM--------------------ASIL 155 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~-~~~~~~~~~~~~--------------------~~~~ 155 (230)
++.-++.-+++++..-..+.++-|.||||+.|..+.-++|.+. ++|.++...+.. +...
T Consensus 84 ~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~ 163 (227)
T COG4947 84 AERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLA 163 (227)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCc
Confidence 3444455566666533456788899999999998877766654 445554333221 1111
Q ss_pred cccccccccCCCCCEEEEecCCCcccCH-HHHHHHHHhccCceEEEEecCCCcc
Q 026965 156 FGRHHKAILKSPKPKLFVMGTRDGFTSV-KQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 156 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
-....+.+. ++.+.+..|..|+..+. .+..+.+....-+..+.+..|..|.
T Consensus 164 dp~~l~rlr--~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHd 215 (227)
T COG4947 164 DPFRLERLR--RIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHD 215 (227)
T ss_pred ChHHHHHHh--hccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccc
Confidence 001111122 45677888888887664 3344444444333445555555554
No 217
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.36 E-value=0.33 Score=37.61 Aligned_cols=60 Identities=13% Similarity=0.286 Sum_probs=41.9
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHh---ccCceEEEEecCCCcc-cc-cChhhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSS---AAGRVETHLIEGASHF-QM-EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~---~~~~~~~~~~~~~~H~-~~-~~~~~~~~~~~~i~~fl~~ 229 (230)
..+.+.+.+..|.++|.++.+++... .+.+++.+-+.++-|. .+ ..|. ...+...+|+++
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~---~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPK---TYLKKCSEFLRS 289 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcH---HHHHHHHHHHHh
Confidence 67889999999999999888765333 3345677777788888 32 3343 666666777653
No 218
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.34 E-value=0.0062 Score=46.59 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=70.7
Q ss_pred hCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcc--------------------hhhhhh-----------hccc
Q 026965 110 NLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPF--------------------GMMASI-----------LFGR 158 (230)
Q Consensus 110 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~-----------~~~~ 158 (230)
++..+.+.+-|-|--|+.++..|-..|++.+++.+..-. ...+.+ .+.+
T Consensus 230 q~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkq 309 (507)
T COG4287 230 QVEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQ 309 (507)
T ss_pred heeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHH
Confidence 466789999999999999998888888888877643111 110000 0000
Q ss_pred -----------ccccccCCCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccc
Q 026965 159 -----------HHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQM 210 (230)
Q Consensus 159 -----------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 210 (230)
......++..|-+++.++.|++.+++.+.-.+..+.+.+.+..+|+..|...
T Consensus 310 L~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~ 372 (507)
T COG4287 310 LLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI 372 (507)
T ss_pred HHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh
Confidence 0011235688999999999999988888755666666778899999999843
No 219
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.26 E-value=0.017 Score=44.53 Aligned_cols=68 Identities=19% Similarity=0.054 Sum_probs=48.0
Q ss_pred CCCCcEEEEEecchHHHHHHhhhc------ccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccC
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDE------IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTS 182 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~ 182 (230)
.+.+++.|+|||+|+.+...++.. ..-+..+++++.|.......|... -.-+.-++.-+++++|.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~----r~vVsGr~vN~YS~~D~vL~ 290 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKI----RSVVSGRLVNVYSENDWVLG 290 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHH----HHHccCeEEEEecCcHHHHH
Confidence 466789999999999999866532 234678888888876543333211 12356789999999998753
No 220
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.23 E-value=0.0093 Score=47.99 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=36.1
Q ss_pred CcEEEEEecchHHHHHHhhhc----ccce--EEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcc--cCH
Q 026965 114 NRILLVGSSAGAPIAGSAVDE----IEQV--VGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGF--TSV 183 (230)
Q Consensus 114 ~~i~l~G~S~Gg~~a~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~--~~~ 183 (230)
.+|.+.|||+||++|+.+|.. .+.+ ..++.++.|--.... |..... ....+++=+.-..|.+ +|+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~a--FA~~~~---~l~~~~lRVVN~~DiVP~lPp 390 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLA--FKEKLN---ELGVKVLRVVNKQDIVPKLPG 390 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHH--HHHHHH---hcCCCEEEEEECCCccccCCc
Confidence 479999999999999977632 2221 334445544322111 111111 2245667777777765 454
No 221
>PLN02324 triacylglycerol lipase
Probab=96.20 E-value=0.0077 Score=47.26 Aligned_cols=36 Identities=25% Similarity=0.190 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhCCC--CcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPT--NRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+.+...+..+.++++. .+|.+.|||+||++|+.+|.
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 4455555556666654 36999999999999997763
No 222
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.11 E-value=0.44 Score=38.40 Aligned_cols=103 Identities=17% Similarity=0.011 Sum_probs=58.8
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEE-EEeecccccCCCCCCCC
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAV-TFDMRGVGRSTGKASLT 92 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g~s~~~~~~~ 92 (230)
+.+.++.|+ +.|.+-. .|..|++-|+- ....-.-..+.+.| |...+ .-|.|--|.+-..-...
T Consensus 273 ~~reEi~yY-FnPGD~K----------PPL~VYFSGyR--~aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~e 336 (511)
T TIGR03712 273 SKRQEFIYY-FNPGDFK----------PPLNVYFSGYR--PAEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDE 336 (511)
T ss_pred CCCCeeEEe-cCCcCCC----------CCeEEeeccCc--ccCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHH
Confidence 445555554 5566542 68899999972 21111122233444 55555 44666555543222111
Q ss_pred CcccHHHHHHHHHHHHhhC--CCCcEEEEEecchHHHHHHhhhcc
Q 026965 93 GFAEVEDVIAVCKWVSENL--PTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 93 ~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
. -+.+.++|+...+.+ +.+.++|-|.|||..-|+.++...
T Consensus 337 y---E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 337 Y---EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred H---HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 1 134455554444554 456899999999999999887654
No 223
>PLN02310 triacylglycerol lipase
Probab=96.10 E-value=0.0075 Score=47.25 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhhCC----CCcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLP----TNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~----~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+.+...+..+.+.+. ..+|.+.|||+||++|+.++.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 334444444444442 347999999999999997763
No 224
>PLN02847 triacylglycerol lipase
Probab=96.01 E-value=0.074 Score=43.78 Aligned_cols=30 Identities=23% Similarity=0.212 Sum_probs=22.5
Q ss_pred HHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 104 CKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 104 ~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+..+....+.-+++++|||+||.+|..++.
T Consensus 241 L~kal~~~PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 241 LLKALDEYPDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHHHHCCCCeEEEeccChHHHHHHHHHH
Confidence 333344566679999999999999996653
No 225
>PLN02802 triacylglycerol lipase
Probab=95.97 E-value=0.011 Score=47.40 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhCCC--CcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPT--NRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~--~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++...++.+.+.++. .+|++.|||+||.+|..++.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 3444455555555543 37899999999999997764
No 226
>PLN02753 triacylglycerol lipase
Probab=95.92 E-value=0.012 Score=47.50 Aligned_cols=36 Identities=22% Similarity=0.239 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhCC-----CCcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLP-----TNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~-----~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+.+...++.+.++++ ..+|.+.|||+||++|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 445555555555553 358999999999999997763
No 227
>PLN02719 triacylglycerol lipase
Probab=95.88 E-value=0.013 Score=47.17 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhCCC-----CcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSENLPT-----NRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~-----~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++...++.+.+.++. .+|.+.|||+||++|..+|.
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 4455555556565542 47999999999999997763
No 228
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.86 E-value=0.013 Score=45.44 Aligned_cols=86 Identities=21% Similarity=0.215 Sum_probs=46.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccC----CCCCCCCCcccHHHHHHHHHHHHhhCCCCcE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRS----TGKASLTGFAEVEDVIAVCKWVSENLPTNRI 116 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s----~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 116 (230)
.-.||+.||.- +++...|..-+....+.--.. .+..+|+-.. ..-....+....+++.+. + .....++|
T Consensus 80 ~HLvVlthGi~--~~~~~~~~~~~~~~~kk~p~~-~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~---~-~~~si~kI 152 (405)
T KOG4372|consen 80 KHLVVLTHGLH--GADMEYWKEKIEQMTKKMPDK-LIVVRGKMNNMCQTFDGVDVLGERLAEEVKET---L-YDYSIEKI 152 (405)
T ss_pred ceEEEeccccc--cccHHHHHHHHHhhhcCCCcc-eEeeeccccchhhccccceeeecccHHHHhhh---h-hcccccee
Confidence 67999999983 345666666666666541122 2222332111 111111122112222222 2 22236899
Q ss_pred EEEEecchHHHHHHhhh
Q 026965 117 LLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~ 133 (230)
..+|||+||.++..+..
T Consensus 153 SfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeecCCeeeeEEEE
Confidence 99999999999886653
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.83 E-value=0.014 Score=45.22 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc----c---cceEEEEEcCCc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE----I---EQVVGYVSLGYP 147 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~----~---~~~~~~~~~~~~ 147 (230)
..+.+.++.+.+.++.-+|.+.|||+||++|..+|.. . +...+++..+.|
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~P 211 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQP 211 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCC
Confidence 5677777777788888899999999999999977742 1 234556666655
No 230
>PLN02761 lipase class 3 family protein
Probab=95.80 E-value=0.014 Score=47.03 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhhCC------CCcEEEEEecchHHHHHHhh
Q 026965 98 EDVIAVCKWVSENLP------TNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~------~~~i~l~G~S~Gg~~a~~~~ 132 (230)
+++...++.+.+.++ ..+|.+.|||+||++|..+|
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSA 312 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHH
Confidence 455555666656552 24799999999999999776
No 231
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.75 E-value=0.066 Score=42.87 Aligned_cols=86 Identities=23% Similarity=0.221 Sum_probs=53.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCC-CeEEEEeecc----c---ccCCCCCCCCCcccHHHHHHHHHHHHhhC-
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKG-FKAVTFDMRG----V---GRSTGKASLTGFAEVEDVIAVCKWVSENL- 111 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g-~~v~~~d~~g----~---g~s~~~~~~~~~~~~~d~~~~~~~l~~~~- 111 (230)
..++|++.|+|+..++..--..=.+.|+..+ ..|+.+++|- + +..+..+...+ .-|-.-+++|+++.+
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG---l~DQqLAl~WV~~Ni~ 211 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG---LLDQQLALQWVQENIA 211 (601)
T ss_pred ceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---hHHHHHHHHHHHHhHH
Confidence 4589999999865555443333355666543 4466777761 1 12222222222 456666788888763
Q ss_pred ----CCCcEEEEEecchHHHHH
Q 026965 112 ----PTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 112 ----~~~~i~l~G~S~Gg~~a~ 129 (230)
+.++|.|+|-|.|++-+.
T Consensus 212 aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 212 AFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HhCCCcceEEEeccccchhhhh
Confidence 568999999999998655
No 232
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.51 E-value=0.54 Score=42.33 Aligned_cols=91 Identities=22% Similarity=0.263 Sum_probs=52.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHH-HHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIA-VCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~-~~~~l~~~~~~~~i~l~ 119 (230)
.|+++|+|.. -+.......++..|. .|.+|.-....-. ...++++.+ .++.+++-.+..+.-++
T Consensus 2123 ~~~~Ffv~pI---EG~tt~l~~la~rle----------~PaYglQ~T~~vP--~dSies~A~~yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2123 EPPLFFVHPI---EGFTTALESLASRLE----------IPAYGLQCTEAVP--LDSIESLAAYYIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred CCceEEEecc---ccchHHHHHHHhhcC----------CcchhhhccccCC--cchHHHHHHHHHHHHHhcCCCCCeeee
Confidence 7899999986 444444444444432 2333332211111 122555554 45666666677899999
Q ss_pred EecchHHHHHHhhhc---ccceEEEEEcCC
Q 026965 120 GSSAGAPIAGSAVDE---IEQVVGYVSLGY 146 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~---~~~~~~~~~~~~ 146 (230)
|+|+|+.++...+.. ......++++..
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred ccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 999999999977642 223344555543
No 233
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.15 E-value=0.87 Score=37.27 Aligned_cols=127 Identities=18% Similarity=0.201 Sum_probs=70.6
Q ss_pred eecCCCc--eeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHH--HHHHHhCCCeEEEEeecccccCC
Q 026965 11 VETTDGV--KLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGI--ASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 11 ~~~~~g~--~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~--~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
+...++. .|.+.++-|.+- ..-++.+-|+++. +........ ...-..+||.++.=|- ||..+.
T Consensus 7 ~~~~~~~~~~i~fev~LP~~W-----------NgR~~~~GgGG~~-G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~ 73 (474)
T PF07519_consen 7 IHPSDGSAPNIRFEVWLPDNW-----------NGRFLQVGGGGFA-GGINYADGKASMATALARGYATASTDS-GHQGSA 73 (474)
T ss_pred EecCCCCcceEEEEEECChhh-----------ccCeEEECCCeee-CcccccccccccchhhhcCeEEEEecC-CCCCCc
Confidence 3334444 899999999854 3345666665432 222211110 2334456999999995 665443
Q ss_pred CC--CCC-CCcc--------cHHHHHHHHHHHHhh-C--CCCcEEEEEecchHHHHHHhhhcccceEEEEEcCCcchh
Q 026965 87 GK--ASL-TGFA--------EVEDVIAVCKWVSEN-L--PTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLGYPFGM 150 (230)
Q Consensus 87 ~~--~~~-~~~~--------~~~d~~~~~~~l~~~-~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~ 150 (230)
.. ... .... .+.+...+-+.+.+. + ..+.-+..|.|-||..++..|+++|+-.--|+.+.|...
T Consensus 74 ~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 74 GSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred ccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 21 111 1111 122222233333332 2 456789999999999999999987765555555555433
No 234
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.09 E-value=0.096 Score=40.36 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=45.3
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhcc-----------------------Cc-eEEEEecCCCcccccChhhHHHHHHH
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAA-----------------------GR-VETHLIEGASHFQMEGPAYDAQMVNL 222 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~H~~~~~~~~~~~~~~~ 222 (230)
.+++|+..|+.|.+|+.-..+.+++++. .+ ..+..+.++||....+|+ ...+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~---~al~m 309 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPN---ETFIM 309 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHH---HHHHH
Confidence 4799999999999998776665554432 12 566777899999545776 88899
Q ss_pred HHHHHhh
Q 026965 223 ILDFIAS 229 (230)
Q Consensus 223 i~~fl~~ 229 (230)
+..|+..
T Consensus 310 ~~~fi~~ 316 (319)
T PLN02213 310 FQRWISG 316 (319)
T ss_pred HHHHHcC
Confidence 9999864
No 235
>PF03283 PAE: Pectinacetylesterase
Probab=94.97 E-value=0.2 Score=39.22 Aligned_cols=36 Identities=33% Similarity=0.284 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhh-CC-CCcEEEEEecchHHHHHHhh
Q 026965 97 VEDVIAVCKWVSEN-LP-TNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 97 ~~d~~~~~~~l~~~-~~-~~~i~l~G~S~Gg~~a~~~~ 132 (230)
..-+.++++++... ++ .++++|.|.|.||.-++.-+
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 56678888888876 43 57899999999999988544
No 236
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=94.61 E-value=0.087 Score=42.78 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=45.9
Q ss_pred CCCCCEEEEecCCCcccCHHHHHHHHHhcc-----------------------------C-----ceEEEEecCCCcc-c
Q 026965 165 KSPKPKLFVMGTRDGFTSVKQLQNKLSSAA-----------------------------G-----RVETHLIEGASHF-Q 209 (230)
Q Consensus 165 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------------~-----~~~~~~~~~~~H~-~ 209 (230)
...+++|+..|+.|.+|+....+.+++++. . +..++.+.++||+ +
T Consensus 362 ~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp 441 (462)
T PTZ00472 362 EDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVP 441 (462)
T ss_pred hcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccCh
Confidence 346899999999999998765544332221 1 3556778899999 7
Q ss_pred ccChhhHHHHHHHHHHHHhh
Q 026965 210 MEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 210 ~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+.|+ .+.+.+..|+..
T Consensus 442 ~d~P~---~~~~~i~~fl~~ 458 (462)
T PTZ00472 442 MDQPA---VALTMINRFLRN 458 (462)
T ss_pred hhHHH---HHHHHHHHHHcC
Confidence 78887 888999999864
No 237
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.60 E-value=0.27 Score=36.72 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
.+..+++..++..++..++.+.|||+||.+|..+....
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 44445555566778889999999999999999887654
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.60 E-value=0.27 Score=36.72 Aligned_cols=38 Identities=26% Similarity=0.283 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
.+..+++..++..++..++.+.|||+||.+|..+....
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 44445555566778889999999999999999887654
No 239
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.56 E-value=0.37 Score=38.95 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=54.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHH-------------------HHHhCCCeEEEEe-ecccccCCC--CCCC-CCcccH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIAS-------------------GLANKGFKAVTFD-MRGVGRSTG--KASL-TGFAEV 97 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d-~~g~g~s~~--~~~~-~~~~~~ 97 (230)
+|+++++.|++ +++..+..+.+ .+.+. -+++.+| .-|.|.|.. .... .....-
T Consensus 101 rPvi~wlNGGP---GcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 101 RPVIFWLNGGP---GCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CceEEEecCCC---ChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 89999999996 44433333311 11122 3688899 458888774 1111 111124
Q ss_pred HHHHHHHHHHHhh---CCC--CcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSEN---LPT--NRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~---~~~--~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+|+..+.+.+.+. +.. .+.+|+|-|+||.-+-.+|.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 6777777666554 223 48999999999998776653
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.54 E-value=0.18 Score=36.65 Aligned_cols=78 Identities=23% Similarity=0.319 Sum_probs=41.6
Q ss_pred CCeEEEEeeccc-ccCCCCCCCCCcccH-HHHHHHHHHHHhhC-CCCcEEEEEecchHHHHHHhhhcc-------cceEE
Q 026965 71 GFKAVTFDMRGV-GRSTGKASLTGFAEV-EDVIAVCKWVSENL-PTNRILLVGSSAGAPIAGSAVDEI-------EQVVG 140 (230)
Q Consensus 71 g~~v~~~d~~g~-g~s~~~~~~~~~~~~-~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-------~~~~~ 140 (230)
|+.+..+++|.. +--.+.........+ +-...+.+.+.... ..++++++|+|+|+.++..++++. +....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567778887752 111111111111112 22333333333322 457899999999999999766432 12445
Q ss_pred EEEcCCcc
Q 026965 141 YVSLGYPF 148 (230)
Q Consensus 141 ~~~~~~~~ 148 (230)
+++++.|.
T Consensus 82 fVl~gnP~ 89 (225)
T PF08237_consen 82 FVLIGNPR 89 (225)
T ss_pred EEEecCCC
Confidence 77776663
No 241
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=94.47 E-value=0.7 Score=34.89 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=51.6
Q ss_pred eeEEEECCCCCCCCCc---hhhHHHHHHH-HhCCCeEEEEeecccccCC--------CCC-C----CCCcccHHHHHHHH
Q 026965 42 LAIVLVHPYSILGGCQ---GLLKGIASGL-ANKGFKAVTFDMRGVGRST--------GKA-S----LTGFAEVEDVIAVC 104 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~---~~~~~~~~~l-~~~g~~v~~~d~~g~g~s~--------~~~-~----~~~~~~~~d~~~~~ 104 (230)
..|||+=|-....... .....+.+.+ ...+-..+.+-.+|.|... ... . .........+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 3566666654222221 2234455566 2333345556667777621 100 0 11111145566677
Q ss_pred HHHHhhC-CCCcEEEEEecchHHHHHHhhhc
Q 026965 105 KWVSENL-PTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 105 ~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.++.+.+ +.++|.++|+|-|++.|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 7776654 45789999999999999977743
No 242
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.45 E-value=0.17 Score=38.96 Aligned_cols=62 Identities=21% Similarity=0.197 Sum_probs=39.8
Q ss_pred CeEEEEeec-ccccCCCCCCCCCcc---cHHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhhh
Q 026965 72 FKAVTFDMR-GVGRSTGKASLTGFA---EVEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 72 ~~v~~~d~~-g~g~s~~~~~~~~~~---~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
.+++.+|.| |.|.|-......... .++|+..+++...++ +...+++|.|-|.||..+-.++.
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 368899988 888886443222111 135555555444443 45678999999999997775553
No 243
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.28 E-value=0.16 Score=32.51 Aligned_cols=29 Identities=21% Similarity=0.494 Sum_probs=18.6
Q ss_pred cCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCC
Q 026965 13 TTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYS 51 (230)
Q Consensus 13 ~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~ 51 (230)
..+|..|++....+++.. ..+||++||++
T Consensus 74 ~I~g~~iHFih~rs~~~~----------aiPLll~HGWP 102 (112)
T PF06441_consen 74 EIDGLDIHFIHVRSKRPN----------AIPLLLLHGWP 102 (112)
T ss_dssp EETTEEEEEEEE--S-TT-----------EEEEEE--SS
T ss_pred EEeeEEEEEEEeeCCCCC----------CeEEEEECCCC
Confidence 357999999988886642 67899999995
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.96 E-value=0.077 Score=43.18 Aligned_cols=64 Identities=11% Similarity=0.154 Sum_probs=45.6
Q ss_pred CCCCCEEEEecCCCcccCHHHHHHHHHhc----cC-------ceEEEEecCCCcccccC-hhhHHHHHHHHHHHHhh
Q 026965 165 KSPKPKLFVMGTRDGFTSVKQLQNKLSSA----AG-------RVETHLIEGASHFQMEG-PAYDAQMVNLILDFIAS 229 (230)
Q Consensus 165 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~H~~~~~-~~~~~~~~~~i~~fl~~ 229 (230)
+-.-++++.||..|+++++..+...+++. .+ -.++..+||.+|..-.. +... ..+..|.+|+++
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~-d~l~aL~~WVE~ 426 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF-DALTALVDWVEN 426 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC-CHHHHHHHHHhC
Confidence 34578999999999999988776555443 11 25889999999993221 2211 678888888864
No 245
>PLN02209 serine carboxypeptidase
Probab=93.71 E-value=0.3 Score=39.41 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=61.0
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHH--------------------HHHhCCCeE
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIAS--------------------GLANKGFKA 74 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~--------------------~l~~~g~~v 74 (230)
.+..+.|+++...+. ..+.|+++++.|+++.++-...+....+ .+.+. .++
T Consensus 50 ~~~~lf~~f~es~~~--------~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anl 120 (437)
T PLN02209 50 ENVQFFYYFIKSDKN--------PQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANI 120 (437)
T ss_pred CCeEEEEEEEecCCC--------CCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcE
Confidence 456788888876533 2237999999999632211111111100 11222 578
Q ss_pred EEEee-cccccCCCCCCCCCcc---cHHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhh
Q 026965 75 VTFDM-RGVGRSTGKASLTGFA---EVEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 75 ~~~d~-~g~g~s~~~~~~~~~~---~~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
+.+|. .|.|.|.......... .++++..++....+. +...+++|.|.|+||..+-.++
T Consensus 121 lfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 99995 4888885432211111 134444444333333 3456899999999998666554
No 246
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.67 E-value=1.1 Score=34.20 Aligned_cols=109 Identities=14% Similarity=0.089 Sum_probs=64.6
Q ss_pred CCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHH--------------HHHHhCCCeEEEEee
Q 026965 14 TDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIA--------------SGLANKGFKAVTFDM 79 (230)
Q Consensus 14 ~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~--------------~~l~~~g~~v~~~d~ 79 (230)
.++..+.+++|...... ....|..+.+.|++ +.+..-+..+. .+|.. ..++.+|-
T Consensus 11 r~~a~~F~wly~~~~~~-------ks~~pl~lwlqGgp--GaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDn 79 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATANV-------KSERPLALWLQGGP--GASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDN 79 (414)
T ss_pred ecCceEEEEEeeecccc-------ccCCCeeEEecCCC--CCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecC
Confidence 46667888888664431 12278999999987 44433333221 22322 46777776
Q ss_pred c-ccccCCCCCCCCCccc----HHHHHHHHHHHHh---hCCCCcEEEEEecchHHHHHHhhh
Q 026965 80 R-GVGRSTGKASLTGFAE----VEDVIAVCKWVSE---NLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 80 ~-g~g~s~~~~~~~~~~~----~~d~~~~~~~l~~---~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
| |.|.|--......... ..|+.++++.+.. .+...+++|+.-|.||-++...+.
T Consensus 80 PVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al 141 (414)
T KOG1283|consen 80 PVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFAL 141 (414)
T ss_pred CCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhh
Confidence 5 6666643322211111 4555555544433 256678999999999999997664
No 247
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.60 E-value=0.25 Score=39.85 Aligned_cols=60 Identities=18% Similarity=0.252 Sum_probs=45.2
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhcc------------------------CceEEEEecCCCcc-cccChhhHHHHHH
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAA------------------------GRVETHLIEGASHF-QMEGPAYDAQMVN 221 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~H~-~~~~~~~~~~~~~ 221 (230)
..++++..|+.|-+||.-..+.+++.+. .+..+..+.|+||. ..+.|+ ....
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~---~al~ 439 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPE---SALI 439 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcH---HHHH
Confidence 3799999999999999876665543331 12345778899999 777777 7778
Q ss_pred HHHHHHhh
Q 026965 222 LILDFIAS 229 (230)
Q Consensus 222 ~i~~fl~~ 229 (230)
.+..||..
T Consensus 440 m~~~fl~g 447 (454)
T KOG1282|consen 440 MFQRFLNG 447 (454)
T ss_pred HHHHHHcC
Confidence 89999864
No 248
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.59 E-value=0.33 Score=39.11 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=61.9
Q ss_pred CCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhhHHHHH-------------HH-------HhCCCeE
Q 026965 15 DGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLLKGIAS-------------GL-------ANKGFKA 74 (230)
Q Consensus 15 ~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~~-------------~l-------~~~g~~v 74 (230)
.+..+.|+.+...+. ..+.|+|+++.|+++.++....+....+ .+ .+. .++
T Consensus 48 ~~~~lfy~f~es~~~--------~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anl 118 (433)
T PLN03016 48 ENVQFFYYFIKSENN--------PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANI 118 (433)
T ss_pred CCeEEEEEEEecCCC--------cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcE
Confidence 356788888876533 2238999999999632211111111111 11 222 579
Q ss_pred EEEee-cccccCCCCCCCCCccc---HHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhh
Q 026965 75 VTFDM-RGVGRSTGKASLTGFAE---VEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 75 ~~~d~-~g~g~s~~~~~~~~~~~---~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
+.+|. .|.|.|..........+ ++++..++....+. +...+++|+|.|+||..+-.+|
T Consensus 119 lfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la 183 (433)
T PLN03016 119 IFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALV 183 (433)
T ss_pred EEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHH
Confidence 99995 58888864432221111 23444444333233 3457899999999998766554
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.09 E-value=0.47 Score=38.44 Aligned_cols=45 Identities=22% Similarity=0.261 Sum_probs=33.8
Q ss_pred CCCCcEEEEEecchHHHHHHhhh------cccceEEEEEcCCcchhhhhhh
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVD------EIEQVVGYVSLGYPFGMMASIL 155 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
.+.++|.++|+|+|+.+...+.. ...-+..+++++.|...-...|
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w 494 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLW 494 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHH
Confidence 67899999999999999985553 2244667888888887655444
No 250
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=91.96 E-value=2.7 Score=32.24 Aligned_cols=94 Identities=20% Similarity=0.164 Sum_probs=56.0
Q ss_pred ceeEEEECCCCCCCCCc--hhhHHHHHHHHh-CCCeEEEEeecccccCCCCCC--------------CCCcccHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQ--GLLKGIASGLAN-KGFKAVTFDMRGVGRSTGKAS--------------LTGFAEVEDVIAV 103 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~--~~~~~~~~~l~~-~g~~v~~~d~~g~g~s~~~~~--------------~~~~~~~~d~~~~ 103 (230)
+..|+++-|--...+.. .....+...|.. .+..++++--+|.|.-.-... ...+.....+..+
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 56677776642111111 122334455544 577788777777765421110 1112225667777
Q ss_pred HHHHHhhC-CCCcEEEEEecchHHHHHHhhhc
Q 026965 104 CKWVSENL-PTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 104 ~~~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
..+|...+ +.++|+++|+|-|++.+-.+|..
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 77877775 45799999999999998866643
No 251
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=89.37 E-value=3.3 Score=29.68 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=38.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCC-eEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGF-KAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
..+|++.||.. ..+...|..+-..+.++|| +|++...-|+ .++..+++++++. +.+.+.|+
T Consensus 138 e~~vlmgHGt~--h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------------P~~d~vi~~l~~~-~~~~v~L~ 199 (265)
T COG4822 138 EILVLMGHGTD--HHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------------PLVDTVIEYLRKN-GIKEVHLI 199 (265)
T ss_pred eEEEEEecCCC--ccHHHHHHHHHHHHHhcCCCceEEEEecCC---------------CcHHHHHHHHHHc-CCceEEEe
Confidence 56788999962 3344566667777788888 5666555443 3455677777665 44544443
No 252
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.33 E-value=1.7 Score=36.10 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhh-CC-CCcEEEEEecchHHHHHHhh
Q 026965 98 EDVIAVCKWVSEN-LP-TNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 98 ~d~~~~~~~l~~~-~~-~~~i~l~G~S~Gg~~a~~~~ 132 (230)
.....+++.+... ++ ..+|+.+||||||.++=.++
T Consensus 508 ~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 508 ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 3344555555443 44 67899999999998876444
No 253
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=87.67 E-value=0.32 Score=40.19 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=32.2
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhcc-------CceEEEEecCCCcc
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAA-------GRVETHLIEGASHF 208 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~H~ 208 (230)
..|.+++||..|-++|..+..+-|..+. ....++++.++.|+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 6799999999999999876544333221 34688899999998
No 254
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=85.91 E-value=6.5 Score=24.59 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHH--Hhh
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAG--SAV 132 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~--~~~ 132 (230)
+....|..+.+.+..+|+..=.+.++..|.+....-..... +.=...++.+.+.++..+++++|-|--.=.-. .++
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~--~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE--EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCch--hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHH
Confidence 44556677778887878876666666664443222111111 12334556666888999999999987665444 444
Q ss_pred hcccceEEEEE
Q 026965 133 DEIEQVVGYVS 143 (230)
Q Consensus 133 ~~~~~~~~~~~ 143 (230)
...|+-..+|.
T Consensus 86 ~~~P~~i~ai~ 96 (100)
T PF09949_consen 86 RRFPGRILAIY 96 (100)
T ss_pred HHCCCCEEEEE
Confidence 55554444443
No 255
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=82.18 E-value=6.1 Score=28.25 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=41.3
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLP 112 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~ 112 (230)
.++++++||-...-.....-..+.+.|.+.|..+...-+++.|-.-..+. ...+-...+++|+...++
T Consensus 144 ~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~----~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 144 KPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE----NRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH----HHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch----hHHHHHHHHHHHHHHHcC
Confidence 68899999963222223455678889999998888777776544211111 113445567777766654
No 256
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=81.23 E-value=4.2 Score=26.62 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=25.0
Q ss_pred CceeEEEECCCCCCCCCc----------hhh-----------HHHHHHHHhCCCeEEEE
Q 026965 40 SSLAIVLVHPYSILGGCQ----------GLL-----------KGIASGLANKGFKAVTF 77 (230)
Q Consensus 40 ~~~~vi~~hG~~~~~~~~----------~~~-----------~~~~~~l~~~g~~v~~~ 77 (230)
+..++||+||-.|.+.+. .+| ..-.+.|.+.|+.|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 377899999986643321 122 13456788889998755
No 257
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=81.14 E-value=22 Score=27.04 Aligned_cols=65 Identities=22% Similarity=0.224 Sum_probs=42.3
Q ss_pred CCcEEEEEecchHHHHH-HhhhcccceEEEEEcCCcc----hhhhhhhcccccccccCCCCCEEEEecCCCc
Q 026965 113 TNRILLVGSSAGAPIAG-SAVDEIEQVVGYVSLGYPF----GMMASILFGRHHKAILKSPKPKLFVMGTRDG 179 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~ 179 (230)
+.+|-++-+|..|.+.. .+|...|-+...+.-.+.. .++...+. ....+.+.+.|.+++....|-
T Consensus 124 PGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~rs~~p~tFMSNMlY--AcSilyktklp~ivvfNK~Dv 193 (366)
T KOG1532|consen 124 PGQIEAFTWSASGSIITETLASSFPTVVVYVVDTPRSTSPTTFMSNMLY--ACSILYKTKLPFIVVFNKTDV 193 (366)
T ss_pred CCceEEEEecCCccchHhhHhhcCCeEEEEEecCCcCCCchhHHHHHHH--HHHHHHhccCCeEEEEecccc
Confidence 46788999999999888 5566677777766643322 22222221 123355678999999998884
No 258
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=81.13 E-value=7 Score=30.19 Aligned_cols=24 Identities=21% Similarity=0.111 Sum_probs=20.2
Q ss_pred hhCCCCcEEEEEecchHHHHHHhh
Q 026965 109 ENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 109 ~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
...+.++-.++|||+|=+.|+.++
T Consensus 79 ~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 79 RSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHTTHCESEEEESTTHHHHHHHHT
T ss_pred cccccccceeeccchhhHHHHHHC
Confidence 445788999999999999988776
No 259
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=80.65 E-value=21 Score=28.62 Aligned_cols=82 Identities=15% Similarity=0.297 Sum_probs=47.2
Q ss_pred CCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCC----------Cc-------cc---HHHHHH-HHHHHHhhCC
Q 026965 54 GGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLT----------GF-------AE---VEDVIA-VCKWVSENLP 112 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~----------~~-------~~---~~d~~~-~~~~l~~~~~ 112 (230)
..-...+..+.+.+.+.|..++.+|.--.+......+.. .. .. ++-... +..++.+.+.
T Consensus 11 DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~ 90 (403)
T PF06792_consen 11 DTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYD 90 (403)
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 344556777888899999999999974343333221100 00 00 111111 1222223333
Q ss_pred ---CCcEEEEEecchHHHHHHhhhcc
Q 026965 113 ---TNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 113 ---~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
..-|+-+|-|.|..++..+++..
T Consensus 91 ~g~i~Gvi~~GGs~GT~lat~aMr~L 116 (403)
T PF06792_consen 91 EGKIDGVIGIGGSGGTALATAAMRAL 116 (403)
T ss_pred cCCccEEEEecCCccHHHHHHHHHhC
Confidence 45678889999999999888754
No 260
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=75.62 E-value=17 Score=31.16 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=43.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLP 112 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~ 112 (230)
..+++++||-.........-..+.+.|...|..+-..-+|+-|..-..+. ....-+..+++|+..+++
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~----~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPE----NRVKVLKEILDWFKRHLK 618 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCch----hHHHHHHHHHHHHHHHhc
Confidence 56799999974333333455678888888999988877775443322211 114566777777776543
No 261
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=74.65 E-value=30 Score=25.11 Aligned_cols=124 Identities=23% Similarity=0.297 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhCC----CCcEEEEEecch-----HHHHHHhhhc---ccceEEEEEcCCcchh-hhhhhcccccccc
Q 026965 97 VEDVIAVCKWVSENLP----TNRILLVGSSAG-----APIAGSAVDE---IEQVVGYVSLGYPFGM-MASILFGRHHKAI 163 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~----~~~i~l~G~S~G-----g~~a~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 163 (230)
.+|...+++.++++++ .+.++++||.-- ++..+..... ...+.-+..-++|.-. .-..+... .+
T Consensus 117 k~DYe~~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~~d~vi~~l~~~---~~ 193 (265)
T COG4822 117 KNDYEICVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPLVDTVIEYLRKN---GI 193 (265)
T ss_pred hhhHHHHHHHHHHhcCCcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCcHHHHHHHHHHc---CC
Confidence 4888889999998876 245788897432 2222211111 1233333333444321 11222111 12
Q ss_pred cCCC-CCEEEEecCC---CcccCHHHH-HHHHHhccCceEEEEecCCCcccccChhhHHHHHHHHHHHHh
Q 026965 164 LKSP-KPKLFVMGTR---DGFTSVKQL-QNKLSSAAGRVETHLIEGASHFQMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 164 ~~~~-~p~l~i~g~~---D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~ 228 (230)
..++ +|.+++.|++ |-...-+.+ ...+++.+-.++. .+.|-| +.+.....+.+.|.+-+.
T Consensus 194 ~~v~L~PlMlvAG~Ha~nDMasddedswk~il~~~G~~v~~-~l~GLG----E~~~iq~ifi~Hik~aie 258 (265)
T COG4822 194 KEVHLIPLMLVAGDHAKNDMASDDEDSWKNILEKNGFKVEV-YLHGLG----ENPAIQAIFIDHIKDAIE 258 (265)
T ss_pred ceEEEeeeEEeechhhhhhhcccchHHHHHHHHhCCceeEE-EeecCC----CcHHHHHHHHHHHHHHHh
Confidence 2222 6899998864 332222222 2234444333322 233333 445555566666665543
No 262
>PRK02399 hypothetical protein; Provisional
Probab=74.45 E-value=44 Score=26.92 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=45.5
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCC-----------------CCCccc-------HHHHHHHHHHHHhh
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKAS-----------------LTGFAE-------VEDVIAVCKWVSEN 110 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~-----------------~~~~~~-------~~d~~~~~~~l~~~ 110 (230)
.-...+..+.+.+.++|..|+.+|.-..|......+ ...... .+-+..++..+.++
T Consensus 14 TK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~L~~~ 93 (406)
T PRK02399 14 TKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAAFVRELYER 93 (406)
T ss_pred CcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 334556667778888899999999843332211110 000000 11122222222223
Q ss_pred CCCCcEEEEEecchHHHHHHhhhcc
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
-...-++-+|-|.|..++..+++..
T Consensus 94 g~i~gviglGGs~GT~lat~aMr~L 118 (406)
T PRK02399 94 GDVAGVIGLGGSGGTALATPAMRAL 118 (406)
T ss_pred CCccEEEEecCcchHHHHHHHHHhC
Confidence 3456688899999999999887643
No 263
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=74.13 E-value=4.6 Score=27.63 Aligned_cols=52 Identities=17% Similarity=0.242 Sum_probs=28.3
Q ss_pred EEEeecccccCCCCCCCCCcccHHHHHHHH----HHHHhhC----CCCcEEEEEecchHH
Q 026965 75 VTFDMRGVGRSTGKASLTGFAEVEDVIAVC----KWVSENL----PTNRILLVGSSAGAP 126 (230)
Q Consensus 75 ~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~----~~l~~~~----~~~~i~l~G~S~Gg~ 126 (230)
+.+.+-|||..............+.+...+ +.+.+.+ .+++|.|+|.|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 344455777763333222333356677666 5555443 467999999999987
No 264
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=73.66 E-value=8.9 Score=24.75 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=23.1
Q ss_pred ceeEEEECCCCCCCCC----------chhh-----------HHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSILGGC----------QGLL-----------KGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~----------~~~~-----------~~~~~~l~~~g~~v~~~ 77 (230)
..++|++||.-|.+.. ..+| ..-.+.|.+.|+.|+.+
T Consensus 56 ~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 56 YRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred CCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 6789999996433211 1111 12346788889999876
No 265
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=67.98 E-value=25 Score=25.94 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=25.7
Q ss_pred ceeEEEECCCCCCCCCchh-hHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGL-LKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.|.|+|++=.... .+... ...+.+.+.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~-~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVT-QSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCC-CCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5779999875211 22233 445667888889998887754
No 266
>COG0400 Predicted esterase [General function prediction only]
Probab=67.69 E-value=44 Score=24.15 Aligned_cols=60 Identities=18% Similarity=0.118 Sum_probs=37.8
Q ss_pred CCceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec-ccccCCCCCCCCCcccHHHHHHHHHHHHh
Q 026965 39 SSSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR-GVGRSTGKASLTGFAEVEDVIAVCKWVSE 109 (230)
Q Consensus 39 ~~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-g~g~s~~~~~~~~~~~~~d~~~~~~~l~~ 109 (230)
-+.++|+++||.-.--.....-..+.+.|.+.|..|-.-++. ||.-. .+++..+.+|+..
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~-----------~e~~~~~~~wl~~ 204 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP-----------PEELEAARSWLAN 204 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC-----------HHHHHHHHHHHHh
Confidence 347889999996311112334556788888899999888876 33221 2556666666654
No 267
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=67.13 E-value=42 Score=23.72 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=27.8
Q ss_pred ceeEEEECCCCCCCCCchh-hHHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGL-LKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~-~~~~~~~l~~~g~~v~~~d~ 79 (230)
.+.+|++-|.. ++.... -..+.+.|.+.|+.++..|-
T Consensus 22 ~~~viW~TGLS--GsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 22 KGAVIWFTGLS--GSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCeEEEeecCC--CCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 67899999973 333333 34577889999999999983
No 268
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=64.36 E-value=11 Score=27.51 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=26.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
...||++|... ..+......+.+.|.++||.++.++
T Consensus 186 ~g~IiLlHd~~--~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVS--KDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCC--CCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 34688889742 3345567778889999999988764
No 269
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=63.75 E-value=20 Score=26.88 Aligned_cols=104 Identities=10% Similarity=0.172 Sum_probs=50.4
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcccceEEEEEcC---------------CcchhhhhhhcccccccccCC
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIEQVVGYVSLG---------------YPFGMMASILFGRHHKAILKS 166 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~ 166 (230)
++++.+++++... -.++|-+.|..++..++... ...-++... .|+............+-+..+
T Consensus 2 eil~~l~~~i~~~-~pIig~gaGtGlsAk~ae~g-GaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v 79 (268)
T PF09370_consen 2 EILDRLRAQIKAG-KPIIGAGAGTGLSAKCAEKG-GADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVV 79 (268)
T ss_dssp HHHHHHHHHHHTT---EEEEEESSHHHHHHHHHT-T-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-
T ss_pred hHHHHHHHHHhCC-CceEEEeeccchhhHHHHhc-CCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhc
Confidence 3556666655443 46777788988999887653 222233321 122222222222222333344
Q ss_pred C-CCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc
Q 026965 167 P-KPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 167 ~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
+ +|++.-.+..|++...+...+.++..+- .-+.-||..|..
T Consensus 80 ~~tPViaGv~atDP~~~~~~fl~~lk~~Gf-~GV~NfPTvgli 121 (268)
T PF09370_consen 80 KDTPVIAGVCATDPFRDMDRFLDELKELGF-SGVQNFPTVGLI 121 (268)
T ss_dssp SSS-EEEEE-TT-TT--HHHHHHHHHHHT--SEEEE-S-GGG-
T ss_pred cCCCEEEEecCcCCCCcHHHHHHHHHHhCC-ceEEECCcceee
Confidence 4 8999999999999887776666666542 234456765553
No 270
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=63.50 E-value=34 Score=26.73 Aligned_cols=99 Identities=23% Similarity=0.261 Sum_probs=49.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC--CCeEEEEeecccc----cCCCC--CCC----CCcc-cHHHHHHHHHHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK--GFKAVTFDMRGVG----RSTGK--ASL----TGFA-EVEDVIAVCKWV 107 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~g----~s~~~--~~~----~~~~-~~~d~~~~~~~l 107 (230)
+++=+|+||. ++........+++.++ +..|+..|.-+.- ...++ +.. .++. ...|...+.+++
T Consensus 211 g~vDi~V~ga----GTGGTitgvGRylke~~~~~kVv~vdp~~S~~~~~~~~g~~~~~I~GIGyg~~p~~ld~~~vd~~~ 286 (362)
T KOG1252|consen 211 GKVDIFVAGA----GTGGTITGVGRYLKEQNPNIKVVGVDPQESIVLSGGKPGPTFHKIQGIGYGFIPTTLDTKLVDEVL 286 (362)
T ss_pred CCCCEEEecc----CCCceeechhHHHHHhCCCCEEEEeCCCcceeccCCCCCCCccceeccccCcCccccchHHHHHHH
Confidence 5667888986 3444455566666665 3677888765421 11111 000 0010 122222233332
Q ss_pred Hh----------hCCCCcEEEEEecchHHHHH--HhhhcccceEEEEE
Q 026965 108 SE----------NLPTNRILLVGSSAGAPIAG--SAVDEIEQVVGYVS 143 (230)
Q Consensus 108 ~~----------~~~~~~i~l~G~S~Gg~~a~--~~~~~~~~~~~~~~ 143 (230)
+. ++-.+.=.++|-|-|+.++. ..+.++++-..++.
T Consensus 287 ~~~~d~A~~~Ar~La~eeGll~G~SSGan~~aAl~~a~~~en~~kliV 334 (362)
T KOG1252|consen 287 KVSSDEAIEMARRLALEEGLLVGISSGANVAAALKLAKRPENAGKLIV 334 (362)
T ss_pred HhCCHHHHHHHHHHHHhhCeeecccchHHHHHHHHHHhccccCCcEEE
Confidence 21 12233457899999998766 55666554444433
No 271
>PRK11460 putative hydrolase; Provisional
Probab=62.71 E-value=49 Score=24.19 Aligned_cols=62 Identities=10% Similarity=-0.082 Sum_probs=35.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENL 111 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~ 111 (230)
.++|+++||-...--.......+.+.|.+.|..+-...+++.|-.- . .+.+..+.+|+.+.+
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i------~---~~~~~~~~~~l~~~l 209 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI------D---PRLMQFALDRLRYTV 209 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC------C---HHHHHHHHHHHHHHc
Confidence 5678999996311112233445677787778766655555433221 1 255666666666654
No 272
>PRK12467 peptide synthase; Provisional
Probab=62.65 E-value=43 Score=35.84 Aligned_cols=85 Identities=14% Similarity=0.026 Sum_probs=50.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.+.+++.|.. .+....+..+...+.. +..++.+..++.-..... .... .+-.....++++...+..+..+.|
T Consensus 3692 ~~~l~~~h~~---~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~~--~~~~--~~~~~~y~~~~~~~~~~~p~~l~g 3763 (3956)
T PRK12467 3692 FPALFCRHEG---LGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGWQ--DTSL--QAMAVQYADYILWQQAKGPYGLLG 3763 (3956)
T ss_pred ccceeeechh---hcchhhhHHHHHHhCC-CCcEEEEeccccccccCC--ccch--HHHHHHHHHHHHHhccCCCeeeee
Confidence 4669999987 3444456777777755 367777766543222111 1111 111223344444444556789999
Q ss_pred ecchHHHHHHhhh
Q 026965 121 SSAGAPIAGSAVD 133 (230)
Q Consensus 121 ~S~Gg~~a~~~~~ 133 (230)
+|+||.++..++.
T Consensus 3764 ~s~g~~~a~~~~~ 3776 (3956)
T PRK12467 3764 WSLGGTLARLVAE 3776 (3956)
T ss_pred eecchHHHHHHHH
Confidence 9999999987664
No 273
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=62.63 E-value=12 Score=28.16 Aligned_cols=39 Identities=15% Similarity=0.415 Sum_probs=31.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.|+||++.|+.. ++-......+...|..+|+.|.++..|
T Consensus 55 ~~vlIv~eG~Da-AGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 55 RSLLLVLQAMDA-AGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CcEEEEEECCCC-CCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 699999999852 344566788999999999999999655
No 274
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=62.05 E-value=19 Score=23.70 Aligned_cols=31 Identities=19% Similarity=0.293 Sum_probs=19.2
Q ss_pred CCceeEEEECCCCCCCCCchhh--HHHHHHHHhCCC
Q 026965 39 SSSLAIVLVHPYSILGGCQGLL--KGIASGLANKGF 72 (230)
Q Consensus 39 ~~~~~vi~~hG~~~~~~~~~~~--~~~~~~l~~~g~ 72 (230)
+.+|.|+-+||++ +....| .-+++.|-..|.
T Consensus 50 p~KpLVlSfHG~t---GtGKn~v~~liA~~ly~~G~ 82 (127)
T PF06309_consen 50 PRKPLVLSFHGWT---GTGKNFVSRLIAEHLYKSGM 82 (127)
T ss_pred CCCCEEEEeecCC---CCcHHHHHHHHHHHHHhccc
Confidence 3489999999994 444333 235566555553
No 275
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=60.94 E-value=54 Score=22.82 Aligned_cols=54 Identities=24% Similarity=0.312 Sum_probs=38.6
Q ss_pred HHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecch
Q 026965 66 GLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAG 124 (230)
Q Consensus 66 ~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 124 (230)
.|.+.|+..+.+|.=++=... ..... ..++.++++.+++..+.+++.++--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~---~~~~i--~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP---YEDEI--PPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC---CcCcC--CHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 488899999999975431111 11111 3678888888888877779999999886
No 276
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=59.94 E-value=11 Score=26.65 Aligned_cols=37 Identities=27% Similarity=0.307 Sum_probs=24.2
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
..||++|.......+......+.+.|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 3588899421012334456778888889999988764
No 277
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=58.22 E-value=27 Score=27.80 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=28.0
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
|+|+|.. -...|..+++.|+++|+.|.++-..+.+.
T Consensus 2 il~~~~~-----~p~~~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQN-----FPGQFRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCC-----CchhHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 7899974 23557889999999999998887665544
No 278
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=58.05 E-value=87 Score=24.33 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=42.1
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccc------cC-CCCCC--CCCcccHHHHHHHHHHHHhhCCCC
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVG------RS-TGKAS--LTGFAEVEDVIAVCKWVSENLPTN 114 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g------~s-~~~~~--~~~~~~~~d~~~~~~~l~~~~~~~ 114 (230)
.|+|-| .+...=..++..|.++||.|++--+-.-| .. ++... ..+...-+.+.++.++++++++.+
T Consensus 31 ~VlITG-----CDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 31 AVLITG-----CDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred EEEEec-----CCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 566766 45556677999999999999876433222 21 11110 111222578888999998887665
Q ss_pred c
Q 026965 115 R 115 (230)
Q Consensus 115 ~ 115 (230)
.
T Consensus 106 g 106 (322)
T KOG1610|consen 106 G 106 (322)
T ss_pred c
Confidence 4
No 279
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=57.86 E-value=35 Score=20.16 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhh---CCCCcEEEEEecchHHHHHHhhh
Q 026965 97 VEDVIAVCKWVSEN---LPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 97 ~~d~~~~~~~l~~~---~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
...+.+.+++++++ -+.+++.++|-|-|=.+|...+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~ 59 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAA 59 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHH
Confidence 46677788888775 24578999999999888875543
No 280
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=57.75 E-value=15 Score=27.75 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=25.1
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
..||++|.. ..+......+.+.|.++||.++.++
T Consensus 231 G~IILmHd~---~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPT---ASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCC---ccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 357888974 3455567778888888999888764
No 281
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.30 E-value=49 Score=24.73 Aligned_cols=57 Identities=18% Similarity=0.352 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcc--cHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 61 KGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFA--EVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~--~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
..++.....+|+.++.+-+++.-..+ ...+.+. .+-++..++++++.+ +.+++++.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~~eaD~~--~~~~e~~~~~iG~vg~lik~l~~~-~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLRGEADPE--LKEFEYKEVSIGEVGKLIKLLKTE-GVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEecCccchh--hhcCCCeEEeHHHHHHHHHHHHHc-CCcEEEEec
Confidence 45788889999999999887543322 2222222 278888999988776 677888776
No 282
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=56.89 E-value=16 Score=26.86 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=31.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.|+||++.|+.. ++-......+...|..+|+.|.++..|
T Consensus 30 ~~vlIv~eG~Da-AGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 30 ARVVIVFEGRDA-AGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCEEEEEeCCCC-CCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 689999999853 344566788999999999999998765
No 283
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=56.73 E-value=19 Score=27.41 Aligned_cols=23 Identities=22% Similarity=0.170 Sum_probs=19.1
Q ss_pred hCCCCcEEEEEecchHHHHHHhh
Q 026965 110 NLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 110 ~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
..+.++-.++|||+|=+.|+.++
T Consensus 72 ~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 72 ALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred hcCCCCcEEeecCHHHHHHHHHh
Confidence 34678899999999998888766
No 284
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=56.71 E-value=18 Score=27.43 Aligned_cols=25 Identities=20% Similarity=0.142 Sum_probs=20.2
Q ss_pred hhCCCCcEEEEEecchHHHHHHhhh
Q 026965 109 ENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 109 ~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
...+.++-.++|||+|-+.|+.++.
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHhC
Confidence 3457788899999999999887663
No 285
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=56.50 E-value=15 Score=27.70 Aligned_cols=20 Identities=25% Similarity=0.074 Sum_probs=17.6
Q ss_pred CCcEEEEEecchHHHHHHhh
Q 026965 113 TNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~ 132 (230)
..+-.++|||+|=+.|+.++
T Consensus 82 i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCCCEEeecCHHHHHHHHHh
Confidence 78889999999998888766
No 286
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=56.33 E-value=15 Score=28.31 Aligned_cols=28 Identities=21% Similarity=0.114 Sum_probs=21.4
Q ss_pred HHHhhC-CCCcEEEEEecchHHHHHHhhh
Q 026965 106 WVSENL-PTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 106 ~l~~~~-~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
.+.++. +.++.++.|||+|=+.|+.++.
T Consensus 76 ~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 76 VLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 333433 6788899999999999987764
No 287
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=55.95 E-value=20 Score=24.81 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=23.2
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.+++.+.++ +...-.+.|-|.|+.++..++..
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 345555554 44566899999999999987753
No 288
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=55.94 E-value=47 Score=23.84 Aligned_cols=44 Identities=16% Similarity=0.036 Sum_probs=26.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
..+|+++||-...--.........+.|.+.|.++-.-.++|.|-
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH 198 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGH 198 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SS
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCC
Confidence 45799999963211112334567788888888888777775543
No 289
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=55.00 E-value=94 Score=23.77 Aligned_cols=37 Identities=32% Similarity=0.365 Sum_probs=27.7
Q ss_pred CcEEEEEecchHHHHHHhhh----cccceEEEEEcCCcchh
Q 026965 114 NRILLVGSSAGAPIAGSAVD----EIEQVVGYVSLGYPFGM 150 (230)
Q Consensus 114 ~~i~l~G~S~Gg~~a~~~~~----~~~~~~~~~~~~~~~~~ 150 (230)
.++++.|-|+|++-+..+.. ....+.+.+..++|...
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 57999999999988775443 33568888888877644
No 290
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=54.49 E-value=21 Score=23.06 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHH
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~ 129 (230)
.+....+++....++.+.++++||+--|.+..
T Consensus 43 ~~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 43 LDVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred ccHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 35667778888888999999999987666553
No 291
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=54.34 E-value=57 Score=21.42 Aligned_cols=79 Identities=10% Similarity=-0.007 Sum_probs=37.0
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEec
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSS 122 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S 122 (230)
.+|++++.+........-..++..+.+.|..++.+=+-+-|-..............++...+..+...++. ++.+.+.|
T Consensus 3 ~~iv~~~~Py~~~~~~~al~~A~aa~~~gh~v~~vFf~~DgV~~a~~~q~p~~~~~n~~~~~~~L~~~~~v-~l~vC~~~ 81 (128)
T PRK00207 3 YAIAVTGPAYGTQQASSAYQFAQALLAEGHELVSVFFYQDGVLNANALTVPASDEFDLVRAWQQLAAEHGV-ALNVCVAA 81 (128)
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHhCCCCeeEEEEehHHHHHHhcCCCCchhhhhHHHHHHHHHHhcCC-EEEEeHHH
Confidence 45666766532222233445777888888764333222211111001111110123555666666555566 77776655
No 292
>PF07582 AP_endonuc_2_N: AP endonuclease family 2 C terminus; InterPro: IPR011418 DNA damaging agents such as the anti-tumour drugs bleomycin and neocarzinostatin or those that generate oxygen radicals produce a variety of lesions in DNA. Amongst these is base-loss which forms apurinic/apyrimidinic (AP) sites or strand breaks with atypical 3' termini. DNA repair at the AP sites is initiated by specific endonuclease cleavage of the phosphodiester backbone. Such endonucleases are also generally capable of removing blocking groups from the 3' terminus of DNA strand breaks. AP endonucleases can be classified into two families based on sequence similarity []. This entry represents a highly-conserved sequence found at the C terminus of several apurinic/apyrimidinic (AP) endonucleases in a range of Gram-positive and Gram-negative bacteria. ; PDB: 3LMZ_A 2ZDS_D.
Probab=54.24 E-value=35 Score=18.65 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=26.2
Q ss_pred hHHHHHHHHhCCCe-EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh
Q 026965 60 LKGIASGLANKGFK-AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN 110 (230)
Q Consensus 60 ~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~ 110 (230)
|..+...|..-||. ++++++-..+.+ ..+.+...++++++.
T Consensus 2 w~~i~~~L~~~GYdG~~siE~ED~~~~----------~~~G~~~a~~~lr~~ 43 (55)
T PF07582_consen 2 WKRIFSALREIGYDGWLSIEHEDALMD----------PEEGAREAAAFLRKL 43 (55)
T ss_dssp HHHHHHHHHHTT--SEEEE---STTTS----------HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCceEEEEeecCCCC----------HHHHHHHHHHHHHHh
Confidence 67889999999997 788877533222 257788888888765
No 293
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=54.10 E-value=11 Score=28.13 Aligned_cols=15 Identities=27% Similarity=0.490 Sum_probs=12.7
Q ss_pred CCCcEEEEEecchHH
Q 026965 112 PTNRILLVGSSAGAP 126 (230)
Q Consensus 112 ~~~~i~l~G~S~Gg~ 126 (230)
+...|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 458899999999964
No 294
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=53.36 E-value=72 Score=23.33 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=20.0
Q ss_pred ceeEEEECCCCCCCC--CchhhHHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSILGG--CQGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~--~~~~~~~~~~~l~~~g~~v~~~ 77 (230)
.+.|++.+|..+..- ....|..+++.|.++++.|+.+
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~ 143 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLL 143 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE-
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEE
Confidence 577887887631000 1234677888998888777655
No 295
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=51.48 E-value=68 Score=24.85 Aligned_cols=83 Identities=16% Similarity=0.075 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCeEEEEeecccccCCCCCCC---CCcccHHHHHHHHHHHHhhCCCCcEE------EEEecc---------
Q 026965 62 GIASGLANKGFKAVTFDMRGVGRSTGKASL---TGFAEVEDVIAVCKWVSENLPTNRIL------LVGSSA--------- 123 (230)
Q Consensus 62 ~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~---~~~~~~~d~~~~~~~l~~~~~~~~i~------l~G~S~--------- 123 (230)
.....|.+.||.|+++|--..|........ .....+.|-. .++.+.++...+-|+ .+|-|+
T Consensus 15 Htv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~-~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 15 HTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRA-LLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHH-HHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 356778889999999998766655433321 1111123322 334444443444332 455554
Q ss_pred --hHHHHHHhhhcccceEEEEEcC
Q 026965 124 --GAPIAGSAVDEIEQVVGYVSLG 145 (230)
Q Consensus 124 --Gg~~a~~~~~~~~~~~~~~~~~ 145 (230)
+|.+.+.-+...-.++.++..+
T Consensus 94 Nv~gTl~Ll~am~~~gv~~~vFSS 117 (329)
T COG1087 94 NVVGTLNLIEAMLQTGVKKFIFSS 117 (329)
T ss_pred chHhHHHHHHHHHHhCCCEEEEec
Confidence 4555553333334466666643
No 296
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=51.42 E-value=50 Score=24.64 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=23.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCe-EEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFK-AVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 80 (230)
.+.|++++-.. +........+.+.|.+.|+. +-..+.+
T Consensus 28 ~~rI~~iptAS--~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 28 DAIIVIITSAS--EEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CceEEEEeCCC--CChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 56788888652 22233455667778888884 5555553
No 297
>PRK10279 hypothetical protein; Provisional
Probab=51.24 E-value=22 Score=27.34 Aligned_cols=30 Identities=13% Similarity=0.124 Sum_probs=22.2
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++.+.+. +...-.+.|-|+|+.++..++.
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHc
Confidence 45555443 5566789999999999987774
No 298
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=50.82 E-value=32 Score=27.97 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=23.7
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF 208 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 208 (230)
...+++..|+.|++...... .........+++||+.|.
T Consensus 376 ~tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc 413 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHC 413 (434)
T ss_dssp --SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TT
T ss_pred CCeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeee
Confidence 35799999999999766522 223445667889999998
No 299
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=49.20 E-value=23 Score=29.80 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=21.2
Q ss_pred hhCCCCcEEEEEecchHHHHHHhhh
Q 026965 109 ENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 109 ~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+..+.++-.++|||+|=+.++.++.
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhC
Confidence 4578888999999999998887774
No 300
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=48.24 E-value=31 Score=29.20 Aligned_cols=62 Identities=8% Similarity=0.122 Sum_probs=35.7
Q ss_pred ccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe------cchHHHHHH-hhhcccceEEEEEcC
Q 026965 81 GVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS------SAGAPIAGS-AVDEIEQVVGYVSLG 145 (230)
Q Consensus 81 g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~------S~Gg~~a~~-~~~~~~~~~~~~~~~ 145 (230)
.+|..+.+...........+..++..+... .++++++|| |.|+++++. .|....+ .+.+.+.
T Consensus 307 fyGG~s~~~ekrTRvRaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~d 375 (655)
T COG3887 307 FYGGKSNPMEKRTRVRARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLD 375 (655)
T ss_pred eeCCCcchhHHhHHHHHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEEC
Confidence 345444333333333345555566555444 689999999 789999994 4444333 4455543
No 301
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=47.59 E-value=73 Score=22.86 Aligned_cols=87 Identities=13% Similarity=0.187 Sum_probs=45.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCC--C---------CCCcc--cHHHHHH--HHH
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKA--S---------LTGFA--EVEDVIA--VCK 105 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~---------~~~~~--~~~d~~~--~~~ 105 (230)
.+-|+++.-.. .........+.+.+.+.|+.+..+..... .++... . .-+.. ...-+.. .++
T Consensus 29 ~~~i~~iptA~--~~~~~~~~~~~~~~~~lG~~~~~~~~~~~-~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~ 105 (210)
T cd03129 29 GARVLFIPTAS--GDRDEYGEEYRAAFERLGVEVVHLLLIDT-ANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLD 105 (210)
T ss_pred CCeEEEEeCCC--CChHHHHHHHHHHHHHcCCceEEEeccCC-CCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHH
Confidence 55677776542 22334456677788888887765554321 000000 0 00000 0111222 333
Q ss_pred HHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 106 WVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 106 ~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
.+.+.+. +...++|.|.|+.+....
T Consensus 106 ~i~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 106 AILKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHHH-cCCeEEEcCHHHHHhhhc
Confidence 3444444 567999999999998864
No 302
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=46.83 E-value=29 Score=26.82 Aligned_cols=61 Identities=25% Similarity=0.196 Sum_probs=36.3
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.+.++++.+.... ..++.+ |=|. . ----..+++.+.++ +...=.++|-|+|+.++..++..
T Consensus 3 d~~rl~r~l~~~~-~gLvL~--GGG~-R----------G~ahiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 3 DFSRLARVLTGNS-IALVLG--GGGA-R----------GCAHIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred hHHHHHHHhcCCC-EEEEEC--ChHH-H----------HHHHHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 4677888887763 334443 2111 0 01223355555554 55556788999999999977753
No 303
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=46.57 E-value=27 Score=22.51 Aligned_cols=22 Identities=27% Similarity=0.584 Sum_probs=19.6
Q ss_pred hhHHHHHHHHhCCCeEEEEeec
Q 026965 59 LLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.+...++.|+++|+.+++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4788999999999999999964
No 304
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.10 E-value=34 Score=26.49 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=20.5
Q ss_pred HHHHHHhhCCCC---cE-EEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLPTN---RI-LLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~~~---~i-~l~G~S~Gg~~a~~~~~ 133 (230)
+++.+.+.++.. .+ .+.|.|.||.+|+.++.
T Consensus 17 vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~ 51 (312)
T cd07212 17 MLIAIEKALGRPIRELFDWIAGTSTGGILALALLH 51 (312)
T ss_pred HHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHc
Confidence 455555544331 12 47799999999998774
No 305
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=46.03 E-value=31 Score=24.26 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
+....++|....++.+.|+++|||-=|++...+
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 356778888888999999999999767666544
No 306
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=46.02 E-value=57 Score=24.17 Aligned_cols=28 Identities=29% Similarity=0.582 Sum_probs=22.2
Q ss_pred hHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 60 LKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 60 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
+..+.+.|.+.|.+|..+|..|.|.++.
T Consensus 59 f~amve~L~~~GvdV~ifddtg~~~TPD 86 (318)
T COG4874 59 FNAMVEGLRQAGVDVVIFDDTGQGETPD 86 (318)
T ss_pred HHHHHHHHHhcCceEEEeecCCCCCCCc
Confidence 3456778888999999999988777653
No 307
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=45.89 E-value=51 Score=22.59 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=25.1
Q ss_pred eeEEEECCCCCCCCCch-hhHHHHHHHHhCCCeEEEEeec
Q 026965 42 LAIVLVHPYSILGGCQG-LLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
+.+|++-|.. ++... .-..+.+.|.+.|+.++..|--
T Consensus 2 g~vIwltGls--GsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 2 GFVIWLTGLS--GSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp -EEEEEESST--TSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CEEEEEECCC--CCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 5799999984 33333 2345678888899999999853
No 308
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.73 E-value=45 Score=24.38 Aligned_cols=36 Identities=19% Similarity=0.243 Sum_probs=26.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.+..|++-|. +....=..++..|++.||.|++-..+
T Consensus 6 ~~k~VlItgc----s~GGIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGC----SSGGIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeec----CCcchhHHHHHHHHhCCeEEEEEccc
Confidence 4556777773 44445567899999999999987654
No 309
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=45.61 E-value=36 Score=23.87 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=22.2
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
.+++.+.++ +...=.+.|-|.||.++..++.
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHc
Confidence 455555443 4445689999999999997774
No 310
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.60 E-value=34 Score=25.13 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=22.7
Q ss_pred HHHHHHHhh-CCCCcEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSEN-LPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
-+++.+.++ +..+.-.+.|-|.|+.++..++..
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcC
Confidence 455666554 222245899999999999977753
No 311
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.32 E-value=39 Score=24.64 Aligned_cols=30 Identities=23% Similarity=0.195 Sum_probs=21.5
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++.+.+. +.+.-.+.|-|.|+.++..++.
T Consensus 18 vL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 18 FLAALLEM-GLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHc-CCCceEEEEeCHHHHHHHHHHc
Confidence 44555443 4445579999999999997774
No 312
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=43.90 E-value=52 Score=19.77 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+...+++-+++.++.+.|.+.|.+....+|-.+..
T Consensus 28 ~~~~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 28 GPAAWVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred CHHHHHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 34557777888899999999999999999986654
No 313
>PRK04148 hypothetical protein; Provisional
Probab=42.86 E-value=97 Score=20.65 Aligned_cols=22 Identities=14% Similarity=0.067 Sum_probs=17.6
Q ss_pred CcEEEEEecchHHHHHHhhhcc
Q 026965 114 NRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 114 ~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
.++..+|-..|..++..++...
T Consensus 18 ~kileIG~GfG~~vA~~L~~~G 39 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKESG 39 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHCC
Confidence 5799999998888888777543
No 314
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=42.83 E-value=80 Score=21.25 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
.+....+++....++.+.|+++|||-=|++...+
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 6777888888889999999999998777766443
No 315
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=42.66 E-value=11 Score=27.68 Aligned_cols=39 Identities=18% Similarity=0.370 Sum_probs=27.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.|+||++.|+.. ++-......+...|..+|+.|.++.-|
T Consensus 30 ~~vlIl~eG~d~-sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDA-SGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTT-SSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEecccc-CCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 679999999842 233455677888888999999999766
No 316
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=41.97 E-value=97 Score=21.22 Aligned_cols=49 Identities=24% Similarity=0.359 Sum_probs=32.6
Q ss_pred CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 71 GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 71 g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
|-.|++.|.+|--.|+ +.+...++.+... +.+=.+++|-|.|=.-++..
T Consensus 67 ~~~vi~Ld~~Gk~~sS-----------e~fA~~l~~~~~~-G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRGKALSS-----------EEFADFLERLRDD-GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCCCcCCh-----------HHHHHHHHHHHhc-CCeEEEEEeCcccCCHHHHH
Confidence 6789999988754333 6677777666554 44556788999885555433
No 317
>COG0218 Predicted GTPase [General function prediction only]
Probab=41.75 E-value=33 Score=24.57 Aligned_cols=64 Identities=11% Similarity=0.113 Sum_probs=35.7
Q ss_pred cccccCCCCCEEEEecCCCcccCHHHHH---HHHHhcc--CceE--EEEecCCCcccccChhhHHHHHHHHHHHHhh
Q 026965 160 HKAILKSPKPKLFVMGTRDGFTSVKQLQ---NKLSSAA--GRVE--THLIEGASHFQMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 160 ~~~~~~~~~p~l~i~g~~D~~~~~~~~~---~~~~~~~--~~~~--~~~~~~~~H~~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.+.+....+|++++.-..|.+-.-+..+ ...+.+. +... ++.++-.... -.+++.+.|.+|+..
T Consensus 128 ~~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~------Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 128 IEFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKK------GIDELKAKILEWLKE 198 (200)
T ss_pred HHHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccccc------CHHHHHHHHHHHhhc
Confidence 4455667899999999999987544322 1222221 2222 4444432222 123777777777653
No 318
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=41.51 E-value=53 Score=22.83 Aligned_cols=21 Identities=33% Similarity=0.525 Sum_probs=17.0
Q ss_pred hhHHHHHHHHhCCCeEEEEee
Q 026965 59 LLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~ 79 (230)
.-..++..|+++|+.|+.+|.
T Consensus 15 ~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 15 IAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHHhcccccccccccccc
Confidence 345688999999999999998
No 319
>PLN03006 carbonate dehydratase
Probab=41.13 E-value=38 Score=26.02 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 100 VIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 100 ~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
+...++|....++.+.|+++|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 56788888899999999999999766665433
No 320
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=41.13 E-value=40 Score=25.48 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=22.4
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
-+++.+.+. +..-=.+.|-|+|+.++..++..
T Consensus 27 GVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEA-GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHc-CCCccEEEEECHHHHHHHHHHcC
Confidence 355555443 55555788999999999977753
No 321
>COG3933 Transcriptional antiterminator [Transcription]
Probab=40.77 E-value=2.1e+02 Score=23.63 Aligned_cols=72 Identities=18% Similarity=0.136 Sum_probs=45.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
-.++|..||+ ++...+...+..|...+ -+.++|+|-- .. ..|+.+.+....++.+..+=.++=
T Consensus 109 v~vIiiAHG~----sTASSmaevanrLL~~~-~~~aiDMPLd---------vs---p~~vle~l~e~~k~~~~~~GlllL 171 (470)
T COG3933 109 VKVIIIAHGY----STASSMAEVANRLLGEE-IFIAIDMPLD---------VS---PSDVLEKLKEYLKERDYRSGLLLL 171 (470)
T ss_pred eeEEEEecCc----chHHHHHHHHHHHhhcc-ceeeecCCCc---------CC---HHHHHHHHHHHHHhcCccCceEEE
Confidence 6789999995 77888899999998874 5889999821 11 244444443333343444433333
Q ss_pred ecchHHHHH
Q 026965 121 SSAGAPIAG 129 (230)
Q Consensus 121 ~S~Gg~~a~ 129 (230)
-.||...++
T Consensus 172 VDMGSL~~f 180 (470)
T COG3933 172 VDMGSLTSF 180 (470)
T ss_pred EecchHHHH
Confidence 467766655
No 322
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=40.75 E-value=1.5e+02 Score=22.04 Aligned_cols=40 Identities=15% Similarity=0.242 Sum_probs=26.9
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCC--CeEEEEeecccc
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKG--FKAVTFDMRGVG 83 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~g 83 (230)
++|++.|.++ ++-...-..+.+.|.++| +.|..+|--..|
T Consensus 2 pLVvi~G~P~-SGKstrA~~L~~~l~~~~~K~~v~ii~deslg 43 (281)
T KOG3062|consen 2 PLVVICGLPC-SGKSTRAVELREALKERGTKQSVRIIDDESLG 43 (281)
T ss_pred CeEEEeCCCC-CCchhHHHHHHHHHHhhcccceEEEechhhcC
Confidence 3677889874 344455667889998887 467777754443
No 323
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.66 E-value=43 Score=23.80 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
.....++|....++.+.|+++|||-=|.+...+.
T Consensus 72 ~~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 72 GTSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred chhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 3667888888889999999999997666666443
No 324
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=40.02 E-value=1.4e+02 Score=21.41 Aligned_cols=36 Identities=6% Similarity=0.047 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecc----hHHHHHHhhhc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSA----GAPIAGSAVDE 134 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~----Gg~~a~~~~~~ 134 (230)
+.+...+..+..+.+ -.++++|+|. |..++..++.+
T Consensus 94 e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAar 133 (202)
T cd01714 94 LATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAEL 133 (202)
T ss_pred HHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHH
Confidence 555555555545545 4789999988 77788877754
No 325
>COG3675 Predicted lipase [Lipid metabolism]
Probab=39.43 E-value=34 Score=26.10 Aligned_cols=45 Identities=27% Similarity=0.364 Sum_probs=30.6
Q ss_pred HHHHHHhhCCC-CcEEEEEecchHHHHHHhhh----cccceEEEE-EcCCc
Q 026965 103 VCKWVSENLPT-NRILLVGSSAGAPIAGSAVD----EIEQVVGYV-SLGYP 147 (230)
Q Consensus 103 ~~~~l~~~~~~-~~i~l~G~S~Gg~~a~~~~~----~~~~~~~~~-~~~~~ 147 (230)
..+++.+.++. .++.++|||.|++++...+. +.|.+...+ ..+.|
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p~vdnlv~tf~~P 213 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYPRVDNLVVTFGQP 213 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccCCcccceeeccCC
Confidence 55666677666 68899999999998875554 335555554 44444
No 326
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=39.40 E-value=41 Score=25.89 Aligned_cols=30 Identities=30% Similarity=0.255 Sum_probs=22.0
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++.|.+. +...-.+.|-|+|+.++..+|.
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHc
Confidence 34444333 5677799999999999997775
No 327
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=39.24 E-value=48 Score=23.95 Aligned_cols=32 Identities=22% Similarity=0.139 Sum_probs=22.6
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
+++.+.+. +...=.+.|.|.|+.++..++...
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555444 444557889999999999887654
No 328
>PLN03019 carbonic anhydrase
Probab=39.13 E-value=72 Score=24.91 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
.+...++|....++.+.|+++|||-=|.+...+
T Consensus 200 ~v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 356778888888999999999999766655543
No 329
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=39.08 E-value=53 Score=22.67 Aligned_cols=31 Identities=26% Similarity=0.220 Sum_probs=21.5
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
.+++.+.++ +...=.+.|-|.|+.++..++.
T Consensus 17 Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 17 GVLKALEEA-GIPIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHHHHHHHc-CCCeeEEEEECHHHHHHHHHHc
Confidence 345555443 3344578999999999997774
No 330
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=38.84 E-value=47 Score=22.26 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHH
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIA 128 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a 128 (230)
+....+.+....++.+.++++||+-=|++.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 455667777788899999999997544433
No 331
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=38.83 E-value=2.3e+02 Score=23.70 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=32.8
Q ss_pred cEEEEEecchHHHHHHhhhc---ccceEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCC
Q 026965 115 RILLVGSSAGAPIAGSAVDE---IEQVVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTR 177 (230)
Q Consensus 115 ~i~l~G~S~Gg~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~ 177 (230)
+|+..|.---.--+..+... .+++.++++.-..++....+.. .+..+++|+|+++-..
T Consensus 41 ~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~~i~-----~~~~l~~PvL~~~~q~ 101 (484)
T cd03557 41 KIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKMWIA-----GLTALQKPLLHLHTQF 101 (484)
T ss_pred EEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHHHHH-----HHHHcCCCEEEEccCC
Confidence 45555543333333333333 2568888887666665433332 2456788998887664
No 332
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=38.65 E-value=59 Score=22.49 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=21.6
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
+++.+.++ +...=.+.|-|.|+.++..++..
T Consensus 18 vl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 18 VLRALEEE-GIEIDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred HHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcC
Confidence 44555443 34455788999999999977753
No 333
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=38.12 E-value=60 Score=25.56 Aligned_cols=35 Identities=23% Similarity=0.511 Sum_probs=25.6
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
|+++|.....++.......+++.|.++|+.|..+-
T Consensus 3 Il~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~ 37 (392)
T cd03805 3 VAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYT 37 (392)
T ss_pred EEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEc
Confidence 56666543345666777889999999999987764
No 334
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=37.61 E-value=1e+02 Score=19.15 Aligned_cols=57 Identities=21% Similarity=0.364 Sum_probs=33.2
Q ss_pred hhHHHHHHHHhCCCe-EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe
Q 026965 59 LLKGIASGLANKGFK-AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS 121 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~ 121 (230)
........++..|.. ++..+|+|.- + ..+.++.--+|-..+++.+.+. .++.+++|.
T Consensus 15 NvGkaiN~mad~GiTGFfl~eYrGvs--P--d~wkgf~~~EDpE~aik~i~D~--s~~AVlI~t 72 (110)
T COG4075 15 NVGKAINIMADAGITGFFLHEYRGVS--P--DKWKGFSKEEDPESAIKAIRDL--SDKAVLIGT 72 (110)
T ss_pred HHHHHHHHHHhcCcceEEEEEecCcC--h--hHhcCcccccCHHHHHHHHHHh--hhceEEEEE
Confidence 344556777887765 6788888752 2 2233333236666666666654 345566654
No 335
>PRK06398 aldose dehydrogenase; Validated
Probab=37.53 E-value=1.7e+02 Score=21.62 Aligned_cols=53 Identities=17% Similarity=0.213 Sum_probs=29.7
Q ss_pred hHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCC
Q 026965 60 LKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLP 112 (230)
Q Consensus 60 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~ 112 (230)
=..+++.|.++|+.|+..+...-....-.....+....+++.++++.+.++.+
T Consensus 19 G~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 71 (258)
T PRK06398 19 GKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYG 71 (258)
T ss_pred HHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35688899999999998875321110000011122224667777777766543
No 336
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=37.48 E-value=1.5e+02 Score=22.56 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=22.8
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccc
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
++|++-|.+++ |-......+.+.|.+.++.|..++--..+
T Consensus 2 pLiil~G~P~S-GKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCS-GKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTS-SHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCC-cHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 47778888632 22344566788888889999888865555
No 337
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=36.85 E-value=60 Score=27.06 Aligned_cols=40 Identities=13% Similarity=0.205 Sum_probs=32.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
.|++|++-|+.. +|-......+...|..+|+.|..+..|.
T Consensus 39 ~~vlIv~eG~Da-aGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 39 FPVIILIEGWDG-AGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CeEEEEEeCCCC-CChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 789999999852 3445567889999999999999997763
No 338
>PLN00416 carbonate dehydratase
Probab=36.76 E-value=49 Score=24.85 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
.+...+++....++.+.|+++|||-=|.+...+
T Consensus 125 ~~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVHLKVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 456778888889999999999999766665544
No 339
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=36.52 E-value=2.2e+02 Score=25.07 Aligned_cols=64 Identities=20% Similarity=0.241 Sum_probs=47.6
Q ss_pred hhhHHHHHHHHhCCCeEEEE-eecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe-cchHHHHHHhhh
Q 026965 58 GLLKGIASGLANKGFKAVTF-DMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS-SAGAPIAGSAVD 133 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~-d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~-S~Gg~~a~~~~~ 133 (230)
.+|..+++.+.+.|-.++++ |+.|.-. .+...-++..++++++.-+|++--| |.|+.+|.+++.
T Consensus 718 ~YY~nlad~lV~agtHiL~IKDMAG~lK------------P~aa~lLi~alRdk~PdlPiHvHtHDtsGagVAsMlac 783 (1176)
T KOG0369|consen 718 DYYLNLADKLVKAGTHILGIKDMAGVLK------------PEAAKLLIGALRDKFPDLPIHVHTHDTSGAGVASMLAC 783 (1176)
T ss_pred HHHHHHHHHHHhccCeEEeehhhhcccC------------HHHHHHHHHHHHhhCCCCceEEeccCCccHHHHHHHHH
Confidence 46788999999999999987 4543311 2556667788889888889999887 677777776654
No 340
>PRK15219 carbonic anhydrase; Provisional
Probab=36.28 E-value=53 Score=24.48 Aligned_cols=33 Identities=15% Similarity=0.370 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
++...++|....++.+.|+++|||-=|.+...+
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 456788888899999999999998766655544
No 341
>PRK03592 haloalkane dehalogenase; Provisional
Probab=36.21 E-value=1.5e+02 Score=22.33 Aligned_cols=60 Identities=12% Similarity=0.076 Sum_probs=33.0
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccCh---hhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGP---AYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~i~~fl~~ 229 (230)
..|++++||.-.....+... +..+....+++.++--||..-..+ ...+...+.+.++++.
T Consensus 27 g~~vvllHG~~~~~~~w~~~---~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNI---IPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEECCCCCCHHHHHHH---HHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 35899999975443333332 233333347777766677632221 1234666667777654
No 342
>PLN02154 carbonic anhydrase
Probab=35.89 E-value=56 Score=24.99 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
...+.+++....++.+.|+++|||-=|.+...+
T Consensus 151 ~~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 151 ETNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred chhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 356788888888999999999998766655544
No 343
>PLN03014 carbonic anhydrase
Probab=35.59 E-value=91 Score=24.58 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
++...++|....++.+.|+++|||-=|.+...+
T Consensus 205 ~v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 205 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred cchhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 366788888889999999999998766555443
No 344
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=35.38 E-value=52 Score=23.77 Aligned_cols=38 Identities=13% Similarity=0.267 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhcc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDEI 135 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 135 (230)
.++...+++....++.+.|+++||+-=|++...+....
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~~~ 113 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDDQL 113 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccccc
Confidence 46677888888899999999999987777776655443
No 345
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=35.03 E-value=1.5e+02 Score=21.55 Aligned_cols=55 Identities=22% Similarity=0.266 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHhCCCeEEEEeeccccc------CCCCCC----CCCcccHHHHHHHHHHHHhhCC
Q 026965 58 GLLKGIASGLANKGFKAVTFDMRGVGR------STGKAS----LTGFAEVEDVIAVCKWVSENLP 112 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~d~~g~g~------s~~~~~----~~~~~~~~d~~~~~~~l~~~~~ 112 (230)
..=+.+++.|++.|+++++.|+.--+. -.+... ..+.....|+...++...+.++
T Consensus 25 GIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 25 GIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred hHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 344678999999999999998763211 011011 1112235777777777777666
No 346
>PF07897 DUF1675: Protein of unknown function (DUF1675); InterPro: IPR012463 The members of this family are sequences derived from hypothetical plant proteins of unknown function. One member of this family (Q9SFV5 from SWISSPROT) is annotated as a putative RNA-binding protein, but no evidence was found to support this.
Probab=35.00 E-value=1e+02 Score=23.58 Aligned_cols=29 Identities=10% Similarity=0.272 Sum_probs=20.4
Q ss_pred cCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCC
Q 026965 13 TTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPY 50 (230)
Q Consensus 13 ~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~ 50 (230)
.++|.+|.+++|.-.... . -.+|-.+||.
T Consensus 232 gpng~~i~g~ly~y~~~~------~---v~i~c~chg~ 260 (284)
T PF07897_consen 232 GPNGKRIEGFLYKYGKGE------E---VRIVCVCHGS 260 (284)
T ss_pred CCCCceeeEEEEEecCCC------e---EEEEEEecCC
Confidence 357899999999873221 1 5677789995
No 347
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.57 E-value=1.1e+02 Score=23.74 Aligned_cols=38 Identities=16% Similarity=0.318 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEec--chHHHHHHhhhc
Q 026965 97 VEDVIAVCKWVSENLPTNRILLVGSS--AGAPIAGSAVDE 134 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S--~Gg~~a~~~~~~ 134 (230)
...+.+++++..-.+..+++.++|.| +|-.++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 34444555444334566899999996 999999988764
No 348
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=34.45 E-value=1.2e+02 Score=22.93 Aligned_cols=30 Identities=10% Similarity=0.240 Sum_probs=17.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGF 72 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~ 72 (230)
..+|++-||.. ......|..+...|.+.|+
T Consensus 142 ~a~vlmGHGt~--h~an~~Y~~l~~~l~~~~~ 171 (262)
T PF06180_consen 142 EAVVLMGHGTP--HPANAAYSALQAMLKKHGY 171 (262)
T ss_dssp EEEEEEE---S--CHHHHHHHHHHHHHHCCT-
T ss_pred CEEEEEeCCCC--CCccHHHHHHHHHHHhCCC
Confidence 66788889863 2334567778788887763
No 349
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=34.24 E-value=1.2e+02 Score=20.23 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=25.3
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
+|.+-|.. ..+-......+...|.++|+.+.++-.-++|...
T Consensus 2 vv~VvG~~-~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPK-NSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEEST-TSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCC-CCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 56666653 1222345667889999999999877666665544
No 350
>PF13124 DUF3963: Protein of unknown function (DUF3963)
Probab=33.98 E-value=44 Score=16.24 Aligned_cols=15 Identities=13% Similarity=0.262 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHHhh
Q 026965 215 YDAQMVNLILDFIAS 229 (230)
Q Consensus 215 ~~~~~~~~i~~fl~~ 229 (230)
+.++..+.|++|+++
T Consensus 8 fieryfddiqkwirn 22 (40)
T PF13124_consen 8 FIERYFDDIQKWIRN 22 (40)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345677778888775
No 351
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=33.85 E-value=1.6e+02 Score=20.33 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=23.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 77 (230)
.+.|+++-|. +.+...=...+++|.++|+.|.++
T Consensus 25 ~~~v~il~G~---GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 25 GPRVLILCGP---GNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp T-EEEEEE-S---SHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECC---CCChHHHHHHHHHHHHCCCeEEEE
Confidence 5667777775 445555567889999999998874
No 352
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=33.78 E-value=1.8e+02 Score=20.80 Aligned_cols=49 Identities=8% Similarity=0.006 Sum_probs=26.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc--cccCCCCC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG--VGRSTGKA 89 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g--~g~s~~~~ 89 (230)
..++++++|.............+.+.+.+.|-.+-...++| ||-.....
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~ 195 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSR 195 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTS
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCC
Confidence 44677778753112223335567788877776666666664 55544333
No 353
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=33.71 E-value=55 Score=25.35 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=23.4
Q ss_pred EEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 45 VLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 45 i~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
|++++++ .+++......+++.|.++|+.|..+-
T Consensus 2 ~~~~~~~-~gG~~~~~~~la~~l~~~G~ev~v~~ 34 (350)
T cd03785 2 ILIAGGG-TGGHIFPALALAEELRERGAEVLFLG 34 (350)
T ss_pred EEEEecC-chhhhhHHHHHHHHHHhCCCEEEEEE
Confidence 4555543 25555566689999999999987764
No 354
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=33.67 E-value=2.4e+02 Score=22.24 Aligned_cols=79 Identities=10% Similarity=0.077 Sum_probs=48.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCe---EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFK---AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~ 117 (230)
+.+||+--|+ .+...+..-.+.+.+.|.. ++.... .|..+..... .+ ...+..+++.++ -+|+
T Consensus 133 gkPvilStGm----atl~Ei~~Av~~i~~~G~~~~~i~llhC----~s~YP~~~~~----~n-L~~I~~Lk~~f~-~pVG 198 (329)
T TIGR03569 133 GKPVILSTGM----ATLEEIEAAVGVLRDAGTPDSNITLLHC----TTEYPAPFED----VN-LNAMDTLKEAFD-LPVG 198 (329)
T ss_pred CCcEEEECCC----CCHHHHHHHHHHHHHcCCCcCcEEEEEE----CCCCCCCccc----CC-HHHHHHHHHHhC-CCEE
Confidence 5568888885 5777888888899888864 444432 1221111111 11 234556666665 5788
Q ss_pred EEEecchHHHHHHhhh
Q 026965 118 LVGSSAGAPIAGSAVD 133 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~ 133 (230)
+-+||.|-.++..+..
T Consensus 199 ~SdHt~G~~~~~aAva 214 (329)
T TIGR03569 199 YSDHTLGIEAPIAAVA 214 (329)
T ss_pred ECCCCccHHHHHHHHH
Confidence 8999999766664443
No 355
>PRK07877 hypothetical protein; Provisional
Probab=33.44 E-value=2.1e+02 Score=25.43 Aligned_cols=78 Identities=15% Similarity=0.114 Sum_probs=43.3
Q ss_pred hCCCCcEEEEEecchHHHHHHhhhcccce-EEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccC-HHHHH
Q 026965 110 NLPTNRILLVGSSAGAPIAGSAVDEIEQV-VGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTS-VKQLQ 187 (230)
Q Consensus 110 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~-~~~~~ 187 (230)
++...+|.|+|-+.|+.++..++.. .+ ..+.++..- .-.+.+++- . ++...|--.+ .+.+.
T Consensus 104 ~L~~~~V~IvG~GlGs~~a~~Lara--GvvG~l~lvD~D------------~ve~sNLnR--q-~~~~~diG~~Kv~~a~ 166 (722)
T PRK07877 104 RLGRLRIGVVGLSVGHAIAHTLAAE--GLCGELRLADFD------------TLELSNLNR--V-PAGVFDLGVNKAVVAA 166 (722)
T ss_pred HHhcCCEEEEEecHHHHHHHHHHHc--cCCCeEEEEcCC------------EEccccccc--c-cCChhhcccHHHHHHH
Confidence 3567899999999998888887764 22 334443211 111222221 1 2444443222 23344
Q ss_pred HHHHhccCceEEEEecC
Q 026965 188 NKLSSAAGRVETHLIEG 204 (230)
Q Consensus 188 ~~~~~~~~~~~~~~~~~ 204 (230)
+.+.+.++.+++..++.
T Consensus 167 ~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 167 RRIAELDPYLPVEVFTD 183 (722)
T ss_pred HHHHHHCCCCEEEEEec
Confidence 56667777777777664
No 356
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=33.32 E-value=1e+02 Score=21.07 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=25.6
Q ss_pred CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchH
Q 026965 71 GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGA 125 (230)
Q Consensus 71 g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg 125 (230)
+-.+++.|-.|--.++ +++.+.++.....-..+-++++|-|.|=
T Consensus 67 ~~~~i~Ld~~Gk~~sS-----------~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 67 NDYVILLDERGKQLSS-----------EEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp TSEEEEE-TTSEE--H-----------HHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred CCEEEEEcCCCccCCh-----------HHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 5667888877653332 6777777666555333457788999883
No 357
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=33.01 E-value=52 Score=26.79 Aligned_cols=32 Identities=28% Similarity=0.234 Sum_probs=21.8
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
-+++.+.++ +..+=++.|-|.|+.+|..++..
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~ 121 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 345555443 33344899999999999877753
No 358
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=32.43 E-value=74 Score=24.39 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=24.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
-|.|+|.-|.+ ...+.++..||.|+..|+.
T Consensus 252 vPmi~fakG~g----------~~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSG----------GALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcc----------hHHHHHHhcCCcEEeeccc
Confidence 58899998852 2567888899999999984
No 359
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=32.23 E-value=2.1e+02 Score=21.24 Aligned_cols=60 Identities=12% Similarity=0.041 Sum_probs=35.6
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccCh---hhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGP---AYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~---~~~~~~~~~i~~fl~~ 229 (230)
..|++++||-.+..... ......+....+++.++=-||...+.+ ...+.+.+.+.++++.
T Consensus 25 ~~plvllHG~~~~~~~w---~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 25 LTPLLIFNGIGANLELV---FPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEeCCCcchHHH---HHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHH
Confidence 36999999966544322 223444445678888877788733222 1234666666666654
No 360
>PRK10437 carbonic anhydrase; Provisional
Probab=31.97 E-value=77 Score=23.21 Aligned_cols=33 Identities=12% Similarity=0.363 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
+....+++....++.+.|+++||+-=|.+...+
T Consensus 76 ~~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 76 NCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred chHHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 356777888888899999999998766666544
No 361
>PRK10162 acetyl esterase; Provisional
Probab=31.88 E-value=2e+02 Score=22.22 Aligned_cols=40 Identities=8% Similarity=-0.190 Sum_probs=28.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
.|++++++|.. ..-...-..+++.|.+.|..|-...++|.
T Consensus 248 lPp~~i~~g~~--D~L~de~~~~~~~L~~aGv~v~~~~~~g~ 287 (318)
T PRK10162 248 VPPCFIAGAEF--DPLLDDSRLLYQTLAAHQQPCEFKLYPGT 287 (318)
T ss_pred CCCeEEEecCC--CcCcChHHHHHHHHHHcCCCEEEEEECCC
Confidence 46778888863 22334566788999999988877777764
No 362
>PRK10673 acyl-CoA esterase; Provisional
Probab=31.61 E-value=2e+02 Score=20.80 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=33.5
Q ss_pred CCCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccC--hhhHHHHHHHHHHHHhh
Q 026965 166 SPKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEG--PAYDAQMVNLILDFIAS 229 (230)
Q Consensus 166 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~--~~~~~~~~~~i~~fl~~ 229 (230)
.+.|++++||--+....... ....+..+..++.++--||..-.. ....+.+.+.+.++++.
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~---~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGV---LARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCCEEEECCCCCchhHHHH---HHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 35689999997665432222 333333456777777667762111 11223555666666653
No 363
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.52 E-value=2.4e+02 Score=23.74 Aligned_cols=55 Identities=18% Similarity=0.182 Sum_probs=33.6
Q ss_pred HHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHH
Q 026965 64 ASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 64 ~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~ 129 (230)
.++-..+||.|+.+|-.|.-... +-+...+.-+...-.++.|..+|--+=|.=++
T Consensus 459 I~~a~~~gfDVvLiDTAGR~~~~-----------~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv 513 (587)
T KOG0781|consen 459 IQEARNQGFDVVLIDTAGRMHNN-----------APLMTSLAKLIKVNKPDLILFVGEALVGNDSV 513 (587)
T ss_pred HHHHHhcCCCEEEEeccccccCC-----------hhHHHHHHHHHhcCCCceEEEehhhhhCcHHH
Confidence 45555679999999987643221 22333333333444567888888776665555
No 364
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=31.52 E-value=2.9e+02 Score=22.61 Aligned_cols=91 Identities=14% Similarity=0.137 Sum_probs=55.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhC---CCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENL---PTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~i~ 117 (230)
..+++++--. .+....-....+.+.+.|.-|+-.|..++-..-..........+.|++...+.+.... ....-+
T Consensus 48 ~~~villSd~---~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PV 124 (456)
T COG3946 48 QGLVILLSDE---AGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPV 124 (456)
T ss_pred ceeeEEEEcc---cChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccce
Confidence 3345555432 2334444556788888899999999877644333333333333566666666554432 223456
Q ss_pred EEEecchHHHHHHhhhc
Q 026965 118 LVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 118 l~G~S~Gg~~a~~~~~~ 134 (230)
|.|--.||.++...+.+
T Consensus 125 l~g~g~Gg~~A~asaaq 141 (456)
T COG3946 125 LTGPGQGGTLAYASAAQ 141 (456)
T ss_pred EeecCCCcHHHHHHHhh
Confidence 77888999999866644
No 365
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.47 E-value=1.3e+02 Score=23.22 Aligned_cols=36 Identities=14% Similarity=0.104 Sum_probs=23.1
Q ss_pred ceeEEEECCCCCCC--CCchhhHHHHHHHHhCCCeEEE
Q 026965 41 SLAIVLVHPYSILG--GCQGLLKGIASGLANKGFKAVT 76 (230)
Q Consensus 41 ~~~vi~~hG~~~~~--~~~~~~~~~~~~l~~~g~~v~~ 76 (230)
.+.++++||..+.. -....|..+++.+.++|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 46677889863211 1123567788888888888764
No 366
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=31.40 E-value=2.3e+02 Score=23.00 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=36.4
Q ss_pred HHHHHhC--CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEec
Q 026965 64 ASGLANK--GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSS 122 (230)
Q Consensus 64 ~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S 122 (230)
.+.+..+ -|.++.+|.|.++.+.... +....|...++..+.+.+..+-+.++--+
T Consensus 281 l~~~~~~g~~fDlIilDPPsF~r~k~~~----~~~~rdy~~l~~~~~~iL~pgG~l~~~s~ 337 (393)
T COG1092 281 LRKAERRGEKFDLIILDPPSFARSKKQE----FSAQRDYKDLNDLALRLLAPGGTLVTSSC 337 (393)
T ss_pred HHHHHhcCCcccEEEECCcccccCcccc----hhHHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 3444443 4999999999998877544 22257777777777777666555555433
No 367
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=30.92 E-value=1.4e+02 Score=18.83 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
++...+..+..+-....+++-|.+.||.--+..+.
T Consensus 54 eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh 88 (104)
T KOG1752|consen 54 EIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALH 88 (104)
T ss_pred HHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHH
Confidence 45555544433435567889999999987765553
No 368
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=30.49 E-value=81 Score=23.48 Aligned_cols=31 Identities=26% Similarity=0.172 Sum_probs=19.9
Q ss_pred HHHHHHhhCC-CCcEEEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLP-TNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~-~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++.+.++-. ...-.+.|-|.|+.++..++.
T Consensus 18 Vl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~ 49 (245)
T cd07218 18 VAVCLKKYAPHLLLNKISGASAGALAACCLLC 49 (245)
T ss_pred HHHHHHHhCcccCCCeEEEEcHHHHHHHHHHh
Confidence 4555555421 111239999999999997764
No 369
>TIGR03586 PseI pseudaminic acid synthase.
Probab=30.39 E-value=2.7e+02 Score=21.90 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=48.3
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCC-eEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGF-KAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
+.+||+--|+ ++...+..-.+.+.+.|. .++... +.|..+..... .+ ...+..+++.++ -+|++.
T Consensus 134 gkPvilstG~----~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~----~n-L~~i~~lk~~f~-~pVG~S 199 (327)
T TIGR03586 134 GKPIIMSTGI----ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLED----AN-LRTIPDLAERFN-VPVGLS 199 (327)
T ss_pred CCcEEEECCC----CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCccc----CC-HHHHHHHHHHhC-CCEEee
Confidence 5668888884 577888888899988887 455443 22332211111 11 234556666664 578889
Q ss_pred EecchHHHHHHhh
Q 026965 120 GSSAGAPIAGSAV 132 (230)
Q Consensus 120 G~S~Gg~~a~~~~ 132 (230)
.|+.|-.+++.+.
T Consensus 200 DHt~G~~~~~aAv 212 (327)
T TIGR03586 200 DHTLGILAPVAAV 212 (327)
T ss_pred CCCCchHHHHHHH
Confidence 9999976666444
No 370
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=30.38 E-value=48 Score=26.82 Aligned_cols=61 Identities=18% Similarity=0.235 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCCcccCHHHHHHHHHh----ccCceEEEEecCCCccc-c-cChhhHHHHHHHHHHHHhh
Q 026965 166 SPKPKLFVMGTRDGFTSVKQLQNKLSS----AAGRVETHLIEGASHFQ-M-EGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 166 ~~~p~l~i~g~~D~~~~~~~~~~~~~~----~~~~~~~~~~~~~~H~~-~-~~~~~~~~~~~~i~~fl~~ 229 (230)
-+.|++++.|.-|.+-+- ... .+.. .+-..-.+-+||.|+.. . -.++. ..+...+.+||.+
T Consensus 188 ~p~P~VIv~gGlDs~qeD-~~~-l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~-~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQED-LYR-LFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS-SRLHQAVLDYLAS 254 (411)
T ss_dssp S-EEEEEEE--TTS-GGG-GHH-HHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C-CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHHH-HHH-HHHHHHHhCCCEEEEEccCCCcccccCCCCcCH-HHHHHHHHHHHhc
Confidence 467999999999987642 222 3332 22234455678888762 1 11221 2667778888764
No 371
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=30.21 E-value=1.1e+02 Score=22.62 Aligned_cols=63 Identities=17% Similarity=0.105 Sum_probs=38.2
Q ss_pred HHHHHHhCCCeEEEEeecccccCCCCCCCC-CcccHHHHHHHHHHHHhh-CCCCcEEEEEecchHHH
Q 026965 63 IASGLANKGFKAVTFDMRGVGRSTGKASLT-GFAEVEDVIAVCKWVSEN-LPTNRILLVGSSAGAPI 127 (230)
Q Consensus 63 ~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~-~~~~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~ 127 (230)
..+.|.+.+..++..|+-|- .+--.+.. ....++|....++.+.+. +..-+-+.+|-+.|+.-
T Consensus 102 ~~eklk~~~vdvvsLDfvgD--n~vIk~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~ 166 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGD--NDVIKRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIH 166 (275)
T ss_pred HHHHHHHhcCcEEEEeecCC--hHHHHHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCccc
Confidence 34566666778888888642 21111111 112267888888777664 34456688999998864
No 372
>CHL00175 minD septum-site determining protein; Validated
Probab=29.90 E-value=1.5e+02 Score=22.33 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=25.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 79 (230)
..+|.+..|-|+. +-...-..++..|++.|+.|+.+|.
T Consensus 15 ~~vi~v~s~KGGv-GKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 15 SRIIVITSGKGGV-GKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred ceEEEEEcCCCCC-cHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 3456666655321 2223345688899999999999986
No 373
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=29.76 E-value=3.1e+02 Score=22.32 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=36.7
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHh--hCCCCcEEEE
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSE--NLPTNRILLV 119 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~--~~~~~~i~l~ 119 (230)
.++++++..............-...|.+.|+.++-|. +|.=. .+....-...+.+++...+..... .+..+++.+.
T Consensus 117 ~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la-~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vlIT 194 (399)
T PRK05579 117 APVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLA-CGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVLIT 194 (399)
T ss_pred CCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-Ccccc-CCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEEEe
Confidence 3455555431011122334555678888899887664 33200 011111112234555554443322 2445677777
Q ss_pred Ee
Q 026965 120 GS 121 (230)
Q Consensus 120 G~ 121 (230)
|-
T Consensus 195 gG 196 (399)
T PRK05579 195 AG 196 (399)
T ss_pred CC
Confidence 76
No 374
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=29.75 E-value=72 Score=26.60 Aligned_cols=39 Identities=10% Similarity=0.336 Sum_probs=32.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.|+||++-|+.. +|-......+...+..+||.|..+--|
T Consensus 298 ~~vlivfeG~Da-AGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 298 RSLVLVFEGWDA-AGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCEEEEEEcccC-CCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 789999999853 445567888999999999999998665
No 375
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=29.72 E-value=1.7e+02 Score=19.21 Aligned_cols=62 Identities=13% Similarity=0.118 Sum_probs=27.4
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS 121 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~ 121 (230)
.-..++..+.+.|..++.+=+-+-|-..............++...+..+...++. ++.+..-
T Consensus 18 ~al~~A~aa~~~gh~v~~vFf~~DgV~~a~~~q~p~~~~~n~~~~~~~L~~~~~i-~l~vC~~ 79 (127)
T TIGR03012 18 SAYQFAQALLAKGHEIVRVFFYQDGVLNANNLVSPASDEFDLVAAWQQLAQEHQV-DLVVCVA 79 (127)
T ss_pred HHHHHHHHHHHCCCcEEEEEEehHHHHhhccCCCCccccccHHHHHHHHHHhcCC-EEEeeHH
Confidence 3345677777888875333222211111111001110123455555555555565 5665543
No 376
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=29.72 E-value=67 Score=26.04 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=22.5
Q ss_pred HHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.+++.+.++ +..+=++.|-|.|+.++..++..
T Consensus 84 GVlkaL~e~-gllp~iI~GtSAGAivaalla~~ 115 (407)
T cd07232 84 GVVKALLDA-DLLPNVISGTSGGSLVAALLCTR 115 (407)
T ss_pred HHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcC
Confidence 345555444 34455799999999999977753
No 377
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=29.27 E-value=2e+02 Score=22.51 Aligned_cols=30 Identities=27% Similarity=0.162 Sum_probs=24.4
Q ss_pred CCCchhhHHHHHHHHhCCCeEE-EEeecccc
Q 026965 54 GGCQGLLKGIASGLANKGFKAV-TFDMRGVG 83 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g 83 (230)
.-+......+.++.+++|..|+ -+|.|||-
T Consensus 71 ~YT~~di~elv~yA~~rgI~vIPEiD~PGH~ 101 (329)
T cd06568 71 YYTQEDYKDIVAYAAERHITVVPEIDMPGHT 101 (329)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecCCcHHH
Confidence 3556778889999999999876 78999984
No 378
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=29.15 E-value=2.4e+02 Score=20.81 Aligned_cols=64 Identities=22% Similarity=0.190 Sum_probs=35.7
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCC--CCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecch
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKA--SLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAG 124 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 124 (230)
.=..+++.|+++|+.|+..+........... ...+....+++..+++.+.+.++ ++.++=|..|
T Consensus 21 IG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li~~Ag 86 (266)
T PRK06171 21 IGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLVNNAG 86 (266)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECCc
Confidence 3456788999999999988764321111100 11122235677777777766543 3444444444
No 379
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.87 E-value=72 Score=25.68 Aligned_cols=31 Identities=23% Similarity=0.120 Sum_probs=21.3
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
+++.+.++ +..+=++.|-|.|+.+|..++..
T Consensus 101 v~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 101 VVKALWLR-GLLPRIITGTATGALIAALVGVH 131 (391)
T ss_pred HHHHHHHc-CCCCceEEEecHHHHHHHHHHcC
Confidence 34444343 44455799999999999987754
No 380
>cd07561 Peptidase_S41_CPP_like C-terminal processing peptidase-like; serine protease family S41. Bacterial protease homologs of the S41 family related to C-terminal processing peptidase (CPP). CPP-1 is believed to be important for the degradation of incorrectly synthesized proteins as well as protection from thermal and osmotic stresses. CPP is synthesized with an extension on its carboxyl-terminus and specifically recognizes a C-terminal tripeptide, but cleaves at variable distance from the C-terminus. The CPP active site consists of a serine/lysine catalytic dyad. Conservation of these residues is seen in the CPP-like proteins of this group. CPP proteins contain a PDZ domain that promotes protein-protein interactions and is important for substrate recognition however, most of CPP-like proteins only have an internal fragment or lack the PDZ domain.
Probab=28.80 E-value=1.7e+02 Score=21.90 Aligned_cols=42 Identities=14% Similarity=0.343 Sum_probs=30.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
.-..|-++.+. ......+....+.|.++|..-+++|+|+.|.
T Consensus 65 ~IGYi~i~~F~--~~~~~~l~~a~~~l~~~~~~~LIlDLR~N~G 106 (256)
T cd07561 65 KVGYLVYNSFT--SGYDDELNQAFAEFKAQGVTELVLDLRYNGG 106 (256)
T ss_pred cEEEEEECccc--cchHHHHHHHHHHHHHcCCCeEEEEeCCCCC
Confidence 45677777763 3445566777778888889999999997654
No 381
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=28.71 E-value=3e+02 Score=21.95 Aligned_cols=65 Identities=18% Similarity=0.214 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCeEEEEeeccc------------ccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHH
Q 026965 61 KGIASGLANKGFKAVTFDMRGV------------GRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIA 128 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~g~------------g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a 128 (230)
..+.+.|.++|+.|.++-+--. -.|.++- +-+.+...+..+++.++. .+-++|.|+|=.+.
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPG------DP~~~~~~i~~ik~l~~~-~iPifGICLGHQll 263 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPG------DPAPLDYAIETIKELLGT-KIPIFGICLGHQLL 263 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCC------ChhHHHHHHHHHHHHhcc-CCCeEEEcHHHHHH
Confidence 4688999999999988754321 1111111 135556666666555443 34789999998876
Q ss_pred HHhh
Q 026965 129 GSAV 132 (230)
Q Consensus 129 ~~~~ 132 (230)
..+.
T Consensus 264 alA~ 267 (368)
T COG0505 264 ALAL 267 (368)
T ss_pred HHhc
Confidence 6555
No 382
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.55 E-value=78 Score=23.52 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=21.1
Q ss_pred HHHHHHHhhCCC---CcE-EEEEecchHHHHHHhhh
Q 026965 102 AVCKWVSENLPT---NRI-LLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 102 ~~~~~l~~~~~~---~~i-~l~G~S~Gg~~a~~~~~ 133 (230)
-+++.+.++ +. +++ .+.|-|.|+.++..++.
T Consensus 16 GVl~~L~e~-g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRH-GKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHc-CchhhccCCEEEEECHHHHHHHHHhc
Confidence 345555554 22 233 79999999999998874
No 383
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.53 E-value=36 Score=23.51 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=42.6
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCe-EEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFK-AVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
...||++-|+ +........ .....++. ++++|+..... . -|+. . .+.+.++
T Consensus 11 d~LIvyFaGw---gtpps~v~H---LilpeN~dl~lcYDY~dl~l------d------fDfs--------A--y~hirlv 62 (214)
T COG2830 11 DHLIVYFAGW---GTPPSAVNH---LILPENHDLLLCYDYQDLNL------D------FDFS--------A--YRHIRLV 62 (214)
T ss_pred CEEEEEEecC---CCCHHHHhh---ccCCCCCcEEEEeehhhcCc------c------cchh--------h--hhhhhhh
Confidence 4588888887 344332222 22334455 56788763211 0 1111 1 2467899
Q ss_pred EecchHHHHHHhhhcccceEEEEE
Q 026965 120 GSSAGAPIAGSAVDEIEQVVGYVS 143 (230)
Q Consensus 120 G~S~Gg~~a~~~~~~~~~~~~~~~ 143 (230)
++|||-.+|-.++.-.+-..+..+
T Consensus 63 AwSMGVwvAeR~lqg~~lksatAi 86 (214)
T COG2830 63 AWSMGVWVAERVLQGIRLKSATAI 86 (214)
T ss_pred hhhHHHHHHHHHHhhccccceeee
Confidence 999999999988865443333333
No 384
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=28.48 E-value=2.6e+02 Score=21.02 Aligned_cols=59 Identities=12% Similarity=-0.018 Sum_probs=33.6
Q ss_pred CCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccCh----------hhHHHHHHHHHHHHhh
Q 026965 168 KPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGP----------AYDAQMVNLILDFIAS 229 (230)
Q Consensus 168 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~----------~~~~~~~~~i~~fl~~ 229 (230)
.|++++||.....-...... ..+....+++.++--||.....+ ...+.+.+.+.+++++
T Consensus 30 ~~vlllHG~~~~~~~w~~~~---~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 30 PALVLVHGFGGNADHWRKNT---PVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred CeEEEECCCCCChhHHHHHH---HHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH
Confidence 58999999776543333322 23333456776766667632211 1234667777777764
No 385
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=28.46 E-value=92 Score=21.12 Aligned_cols=30 Identities=30% Similarity=0.297 Sum_probs=20.4
Q ss_pred HHHHHHhh-CCCCcEEEEEecchHHHHHHhh
Q 026965 103 VCKWVSEN-LPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 103 ~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
+++.+.++ +...--.+.|.|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 44445443 2124457889999999999887
No 386
>PTZ00445 p36-lilke protein; Provisional
Probab=28.38 E-value=2.4e+02 Score=20.67 Aligned_cols=65 Identities=15% Similarity=0.058 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHhCCCeEEEEeeccc------cc-CCCCCCC--CCcccHHHHHHHHHHHHhhCCCCcEEEEEecch
Q 026965 58 GLLKGIASGLANKGFKAVTFDMRGV------GR-STGKASL--TGFAEVEDVIAVCKWVSENLPTNRILLVGSSAG 124 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~d~~g~------g~-s~~~~~~--~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 124 (230)
..-..+.+.|.+.|..+++.|+=.. |. -.+.... .......++..++..+.+. +. ++.++-+|-=
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~-~I-~v~VVTfSd~ 102 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS-NI-KISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC-CC-eEEEEEccch
Confidence 3445678889999999999998432 11 1111000 0111135677777666543 33 7888888854
No 387
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.15 E-value=66 Score=22.03 Aligned_cols=23 Identities=26% Similarity=0.099 Sum_probs=16.5
Q ss_pred CCCcEEEEEecchHHHHHHhhhc
Q 026965 112 PTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 112 ~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
...--.+.|-|.||.+++.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 33445788999999999866643
No 388
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=27.93 E-value=1e+02 Score=21.07 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHH
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~ 129 (230)
+....+++....++.+.|+++|||-=|.+..
T Consensus 77 ~~~~sl~yav~~l~v~~IvV~GHt~CG~~~a 107 (154)
T cd03378 77 DVLGSLEYAVEVLGVPLVVVLGHESCGAVAA 107 (154)
T ss_pred hHHHHHHHHHHHhCCCEEEEEcCCCccHHHH
Confidence 3566777777888999999999998444443
No 389
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=27.76 E-value=2.9e+02 Score=21.45 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 97 VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
.+++.++++|+++. .+-++|.|+|+.+++.+.
T Consensus 121 W~El~~i~~w~~~~----~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 121 WDELKEILDWAKTH----VTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHHHc----CCCEEEEcHHHHHHHHHc
Confidence 45688888888765 467899999999998665
No 390
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.62 E-value=93 Score=23.27 Aligned_cols=32 Identities=31% Similarity=0.201 Sum_probs=21.4
Q ss_pred HHHHHHHhhCCCC-cEEEEEecchHHHHHHhhhc
Q 026965 102 AVCKWVSENLPTN-RILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 102 ~~~~~l~~~~~~~-~i~l~G~S~Gg~~a~~~~~~ 134 (230)
.+++.+.+. +.. -=.++|.|.|+.++..++..
T Consensus 15 Gvl~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 15 GVLDAFLEA-GIRPFDLVIGVSAGALNAASYLSG 47 (266)
T ss_pred HHHHHHHHc-CCCCCCEEEEECHHHHhHHHHHhC
Confidence 345555444 233 33789999999999977643
No 391
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=27.59 E-value=1.5e+02 Score=18.16 Aligned_cols=78 Identities=9% Similarity=-0.052 Sum_probs=43.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.++|||..|... ...........+.|.+.|.....+|... . .+....+..+...-....+++=|
T Consensus 12 ~~Vvvf~kg~~~-~~~Cp~C~~ak~lL~~~~i~~~~~di~~-----------~----~~~~~~l~~~tg~~tvP~vfi~g 75 (97)
T TIGR00365 12 NPVVLYMKGTPQ-FPQCGFSARAVQILKACGVPFAYVNVLE-----------D----PEIRQGIKEYSNWPTIPQLYVKG 75 (97)
T ss_pred CCEEEEEccCCC-CCCCchHHHHHHHHHHcCCCEEEEECCC-----------C----HHHHHHHHHHhCCCCCCEEEECC
Confidence 789999887521 1222334456677777887666666520 0 12333333322332334566667
Q ss_pred ecchHHHHHHhhhc
Q 026965 121 SSAGAPIAGSAVDE 134 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~ 134 (230)
...||.--+..+..
T Consensus 76 ~~iGG~ddl~~l~~ 89 (97)
T TIGR00365 76 EFVGGCDIIMEMYQ 89 (97)
T ss_pred EEEeChHHHHHHHH
Confidence 88899877755543
No 392
>PLN02204 diacylglycerol kinase
Probab=27.49 E-value=4.1e+02 Score=23.06 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=25.1
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAV 75 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~ 75 (230)
+..+|++|..++.+.....|..+.+.|...|+.+-
T Consensus 160 k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~ 194 (601)
T PLN02204 160 KNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTK 194 (601)
T ss_pred ceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEE
Confidence 67889999874334445678888888888877643
No 393
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.35 E-value=78 Score=24.69 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=21.2
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
+++.+.++ +..+-++.|-|.|+.+|..++..
T Consensus 86 VlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 86 VVRTLVEH-QLLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcC
Confidence 44444443 44455799999999999977643
No 394
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=27.30 E-value=1.4e+02 Score=22.57 Aligned_cols=25 Identities=24% Similarity=0.243 Sum_probs=19.9
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccc
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
.-..++..|+++|++|+.+|.=-.|
T Consensus 17 ~a~nLA~~La~~G~rVLliD~Dpq~ 41 (279)
T PRK13230 17 TVCNIAAALAESGKKVLVVGCDPKA 41 (279)
T ss_pred HHHHHHHHHHhCCCEEEEEeeCCcc
Confidence 3567899999999999999974333
No 395
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=27.29 E-value=1.6e+02 Score=21.42 Aligned_cols=31 Identities=26% Similarity=0.130 Sum_probs=21.1
Q ss_pred eeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 42 LAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 42 ~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
+.=|++.|.| .+. -+..|+++|+.|+.+|+-
T Consensus 38 ~~rvLvPgCG---~g~-----D~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCG---KGY-----DMLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTT---TSC-----HHHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCC---ChH-----HHHHHHHCCCeEEEEecC
Confidence 3456778752 222 267788899999999974
No 396
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=27.21 E-value=3e+02 Score=21.34 Aligned_cols=19 Identities=26% Similarity=0.536 Sum_probs=12.0
Q ss_pred hhHHHHHHHHhCCCeEEEE
Q 026965 59 LLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~ 77 (230)
.|..+++.+.+.|+.++..
T Consensus 195 ~~~~li~~l~~~~~~ivl~ 213 (334)
T TIGR02195 195 HYAELAKRLIDQGYQVVLF 213 (334)
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 4556677776667766654
No 397
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=27.21 E-value=1.9e+02 Score=22.51 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=23.5
Q ss_pred CCchhhHHHHHHHHhCCCeEE-EEeecccc
Q 026965 55 GCQGLLKGIASGLANKGFKAV-TFDMRGVG 83 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g 83 (230)
-+...++.+.++.+++|..|+ -+|.|||-
T Consensus 79 YT~~di~eiv~yA~~rgI~vIPEID~PGH~ 108 (326)
T cd06564 79 YTKEEFKELIAYAKDRGVNIIPEIDSPGHS 108 (326)
T ss_pred ccHHHHHHHHHHHHHcCCeEeccCCCcHHH
Confidence 456678889999999999886 67899983
No 398
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=27.09 E-value=1.3e+02 Score=17.32 Aligned_cols=10 Identities=40% Similarity=0.365 Sum_probs=7.1
Q ss_pred ceeEEEECCC
Q 026965 41 SLAIVLVHPY 50 (230)
Q Consensus 41 ~~~vi~~hG~ 50 (230)
.|.++++||+
T Consensus 31 ~~~~~lvhGg 40 (71)
T PF10686_consen 31 HPDMVLVHGG 40 (71)
T ss_pred CCCEEEEECC
Confidence 4667788885
No 399
>PF00691 OmpA: OmpA family; InterPro: IPR006665 This entry represents domain with a beta/alpha/beta/alpha-beta(2) structure found in the C-terminal region of many Gram-negative bacterial outer membrane proteins [], such as porin-like integral membrane proteins (such as ompA) [], small lipid-anchored proteins (such as pal) [], and MotB proton channels []. The N-terminal half is variable although some of the proteins in this group have the OmpA-like transmembrane domain IPR000498 from INTERPRO at the N terminus. OmpA from Escherichia coli is required for pathogenesis, and can interact with host receptor molecules []. MotB (and MotA) serves two functions in E. coli, the MotA(4)-MotB(2) complex attaches to the cell wall via MotB to form the stator of the flagellar motor, and the MotA-MotB complex couples the flow of ions across the cell membrane to movement of the rotor [].; GO: 0009279 cell outer membrane; PDB: 1OAP_A 2W8B_G 2HQS_C 4ERH_A 2ZF8_A 2ZOV_A 2ZVZ_B 2ZVY_A 3TD4_B 3TD5_D ....
Probab=27.07 E-value=76 Score=19.16 Aligned_cols=61 Identities=30% Similarity=0.373 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhh-CCCCcEEEEEec
Q 026965 61 KGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSEN-LPTNRILLVGSS 122 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i~l~G~S 122 (230)
..++..|...+... .+...||-.+.+.......-.......+.++|... ++.+++.+.|+.
T Consensus 18 ~~l~~~l~~~~~~~-~i~I~G~td~~g~~~~n~~LS~~RA~~V~~~L~~~gi~~~ri~~~~~G 79 (97)
T PF00691_consen 18 DELAKILKYPGNKD-QIEIEGHTDSTGSAEYNQELSQRRAEAVKQYLVENGIPPERISVVGYG 79 (97)
T ss_dssp HHHHHHHHSTTSTT-EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHHHTTSSGGGEEEEEET
T ss_pred HHHHHHHhCcCCCC-eEEEEEEEcCcchhhHHhHHHHHHHHHHHHHHHHcCCChHhEEEEEEc
Confidence 34556665334443 44455664443322211111134455566666653 556678777664
No 400
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=27.06 E-value=1e+02 Score=23.58 Aligned_cols=38 Identities=21% Similarity=0.258 Sum_probs=23.2
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCC-------eEEEEeecccc
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGF-------KAVTFDMRGVG 83 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~g~g 83 (230)
-|++.|.| ......-..+...+.+.|. +++.+|..|.=
T Consensus 27 ~iv~~GAG--sAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll 71 (279)
T cd05312 27 RILFLGAG--SAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLL 71 (279)
T ss_pred EEEEECcC--HHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeE
Confidence 34455642 2223344556666666687 79999998853
No 401
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=27.04 E-value=1.7e+02 Score=22.46 Aligned_cols=37 Identities=22% Similarity=0.155 Sum_probs=23.8
Q ss_pred ceeEEEECCCCCCCCC--chhhHHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSILGGC--QGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~--~~~~~~~~~~l~~~g~~v~~~ 77 (230)
.+.|++.||..+..-. ...|..+++.|.++|+.++..
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 6778888886321111 135667888888778877654
No 402
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=27.03 E-value=3e+02 Score=21.40 Aligned_cols=30 Identities=17% Similarity=0.281 Sum_probs=24.9
Q ss_pred CCCchhhHHHHHHHHhCCCeEE-EEeecccc
Q 026965 54 GGCQGLLKGIASGLANKGFKAV-TFDMRGVG 83 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g 83 (230)
.-+...+..+.++.+++|..|+ -+|.|||-
T Consensus 64 ~yT~~di~elv~yA~~rgI~vIPEId~PGH~ 94 (311)
T cd06570 64 YYTQEQIREVVAYARDRGIRVVPEIDVPGHA 94 (311)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEeecCccch
Confidence 4567788899999999999876 78999974
No 403
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=26.95 E-value=1e+02 Score=22.82 Aligned_cols=18 Identities=33% Similarity=0.414 Sum_probs=15.6
Q ss_pred EEEEecchHHHHHHhhhc
Q 026965 117 LLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~~ 134 (230)
.+.|-|.|+.++..++..
T Consensus 34 ~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 34 RIAGASAGAIVAAVVLCG 51 (243)
T ss_pred EEEEEcHHHHHHHHHHhC
Confidence 899999999999977753
No 404
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=26.85 E-value=2.3e+02 Score=19.86 Aligned_cols=59 Identities=10% Similarity=0.245 Sum_probs=34.7
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc---hhhHHHHHHHHhCCCeEEEEe
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ---GLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---~~~~~~~~~l~~~g~~v~~~d 78 (230)
.++++...||..+...-+... .++|+|+....-..++. .-|+.-.+.+.+.|+.|+.+.
T Consensus 70 PD~tL~dedg~sisLkkit~n-------------k~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 70 PDFTLKDEDGKSISLKKITGN-------------KPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred CCcccccCCCCeeeeeeecCC-------------CcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeec
Confidence 345666667777766655332 57888887653112221 224444567777788888764
No 405
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=26.76 E-value=81 Score=19.89 Aligned_cols=59 Identities=15% Similarity=0.273 Sum_probs=31.2
Q ss_pred eeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCchhh---HHHHHHHHhCCCeEEEEee
Q 026965 7 ESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQGLL---KGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 7 ~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~ 79 (230)
.++.+++.+|..+...-+ .+ +++||++-...+...+.... ..+.+.+.+.|+.++.+..
T Consensus 6 P~f~l~~~~g~~~~l~~l--~g------------k~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 6 PDFTLTDSDGKTVSLSDL--KG------------KPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp GCEEEETTTSEEEEGGGG--TT------------SEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCcEeECCCCCEEEHHHH--CC------------CcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 456666667665444222 11 56666665532122222222 3344566677899988864
No 406
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=26.34 E-value=2.2e+02 Score=19.60 Aligned_cols=60 Identities=12% Similarity=0.246 Sum_probs=35.5
Q ss_pred ceeeEEeecCCCceeeEEEEccCCcccCCcccCCCCceeEEEECCCCCCCCCc---hhhHHHHHHHHhCCCeEEEEe
Q 026965 5 SVESCAVETTDGVKLNARVFRPKEEEQGGEVKNDSSSLAIVLVHPYSILGGCQ---GLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 5 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~---~~~~~~~~~l~~~g~~v~~~d 78 (230)
...++.++..+|..+...-+. . .++||++....+..++. ..++.....+.+.|..|+.+.
T Consensus 9 ~aPdF~Lp~~~g~~v~Lsd~~-----------G---k~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS 71 (157)
T COG1225 9 KAPDFELPDQDGETVSLSDLR-----------G---KPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGIS 71 (157)
T ss_pred cCCCeEeecCCCCEEehHHhc-----------C---CcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 345566776677653322111 1 57788887764333433 245556677778899998774
No 407
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=26.18 E-value=2.6e+02 Score=21.59 Aligned_cols=30 Identities=27% Similarity=0.266 Sum_probs=24.5
Q ss_pred CCCchhhHHHHHHHHhCCCeEE-EEeecccc
Q 026965 54 GGCQGLLKGIASGLANKGFKAV-TFDMRGVG 83 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g 83 (230)
.-+...+..+.++.+++|..|+ -+|.|||-
T Consensus 68 ~yT~~di~elv~yA~~rgI~viPEiD~PGH~ 98 (303)
T cd02742 68 FYTYAQLKDIIEYAAARGIEVIPEIDMPGHS 98 (303)
T ss_pred eECHHHHHHHHHHHHHcCCEEEEeccchHHH
Confidence 3556778889999999999876 78999974
No 408
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=26.17 E-value=2.5e+02 Score=20.20 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=25.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhC-CCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANK-GFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~ 80 (230)
.+.|+++.=.. .........+.+.+.+. |+.+...+..
T Consensus 31 ~~~i~~IptAs--~~~~~~~~~~~~a~~~l~G~~~~~~~~~ 69 (212)
T cd03146 31 RPKVLFVPTAS--GDRDEYTARFYAAFESLRGVEVSHLHLF 69 (212)
T ss_pred CCeEEEECCCC--CCHHHHHHHHHHHHhhccCcEEEEEecc
Confidence 56788898752 22234455667788888 9988887754
No 409
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=26.16 E-value=1.4e+02 Score=23.98 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=19.6
Q ss_pred hhHHHHHHHHhCCCeEEEEee-cccc
Q 026965 59 LLKGIASGLANKGFKAVTFDM-RGVG 83 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~-~g~g 83 (230)
.-..++..|+.+|++|+++|+ -..|
T Consensus 123 ta~nLA~~LA~~G~rVLlIDl~DpQ~ 148 (387)
T PHA02519 123 SAVHTAQWLALQGHRVLLIEGNDPQG 148 (387)
T ss_pred HHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 345688899999999999995 4443
No 410
>PRK05481 lipoyl synthase; Provisional
Probab=26.09 E-value=2.9e+02 Score=21.15 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHhC--CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecc
Q 026965 58 GLLKGIASGLANK--GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSA 123 (230)
Q Consensus 58 ~~~~~~~~~l~~~--g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~ 123 (230)
..|....+.+.+. |..+-+-=.-|+|++. +|+.+.++.+++ ++.+.+.++-+|-
T Consensus 180 e~~le~i~~ar~~~pgi~~~t~~IvGfGET~-----------ed~~~tl~~lre-l~~d~v~if~Ys~ 235 (289)
T PRK05481 180 ERSLELLKRAKELHPGIPTKSGLMVGLGETD-----------EEVLEVMDDLRA-AGVDILTIGQYLQ 235 (289)
T ss_pred HHHHHHHHHHHHhCCCCeEeeeeEEECCCCH-----------HHHHHHHHHHHh-cCCCEEEEEccCC
Confidence 3344445555555 5554433344554433 666666666644 3566666666665
No 411
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=26.06 E-value=1.5e+02 Score=22.19 Aligned_cols=39 Identities=21% Similarity=0.434 Sum_probs=27.1
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
+++++++....++.......+++.|.+.|+.|..+....
T Consensus 2 I~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 40 (348)
T cd03820 2 ILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDK 40 (348)
T ss_pred eEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 355556553235666667789999998999988776543
No 412
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=25.88 E-value=1.3e+02 Score=17.50 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=16.9
Q ss_pred hhhHHHHHHHHhCCCeEEEEe
Q 026965 58 GLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~d 78 (230)
..-..++..|++.|+.++.+|
T Consensus 14 t~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 14 TLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHHHCCCeEEEEC
Confidence 345567888888999999988
No 413
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=25.88 E-value=2e+02 Score=21.37 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=6.7
Q ss_pred CCCceeeEEEEc
Q 026965 14 TDGVKLNARVFR 25 (230)
Q Consensus 14 ~~g~~l~~~~~~ 25 (230)
.+|.++...-+.
T Consensus 126 ~~g~kia~l~~t 137 (250)
T PF09587_consen 126 VNGVKIAFLGYT 137 (250)
T ss_pred ECCEEEEEEEEE
Confidence 466666655443
No 414
>PRK13599 putative peroxiredoxin; Provisional
Probab=25.78 E-value=2.6e+02 Score=20.36 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=26.0
Q ss_pred ceeEEEECCCCCCCCCchhh---HHHHHHHHhCCCeEEEEe
Q 026965 41 SLAIVLVHPYSILGGCQGLL---KGIASGLANKGFKAVTFD 78 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~---~~~~~~l~~~g~~v~~~d 78 (230)
+++||+.|-..|...+.... ..+.+.+.++|+.++.+.
T Consensus 29 k~vVL~~~pa~~tpvCt~El~~l~~~~~~f~~~gv~vigIS 69 (215)
T PRK13599 29 KWFVLFSHPADFTPVCTTEFVEFARKANDFKELNTELIGLS 69 (215)
T ss_pred CeEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 56778888876555555443 445567777899998885
No 415
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=25.56 E-value=1.6e+02 Score=22.99 Aligned_cols=64 Identities=22% Similarity=0.301 Sum_probs=39.6
Q ss_pred EEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc-cccCCC----CCC-CCC--cccHHHHHHHHHHHHhh
Q 026965 45 VLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG-VGRSTG----KAS-LTG--FAEVEDVIAVCKWVSEN 110 (230)
Q Consensus 45 i~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g-~g~s~~----~~~-~~~--~~~~~d~~~~~~~l~~~ 110 (230)
|++.++. .++...+..+.+.+.+.+.+.+++|.-+ +|.-.. +.. ..+ ...+.|+.++++.+.++
T Consensus 2 iYlt~~~--a~~~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~ 73 (316)
T PF13200_consen 2 IYLTAYS--AGSPERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEH 73 (316)
T ss_pred EEechhh--cCCHHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHC
Confidence 4555652 4555678889999999999999999974 232111 110 000 11147788888777665
No 416
>PRK09936 hypothetical protein; Provisional
Probab=25.43 E-value=1e+02 Score=23.61 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=27.5
Q ss_pred CchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 56 CQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 56 ~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
+...|..+.+.+...|++.+++.+-++|.++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 4567999999999999999999999998873
No 417
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=25.24 E-value=2.6e+02 Score=22.40 Aligned_cols=39 Identities=31% Similarity=0.214 Sum_probs=29.0
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccC
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRS 85 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 85 (230)
+.++|++-|- -+.+..+..-+..|++.||.|-.+ |++.|
T Consensus 13 ~ra~vvVLGD---vGRSPRMqYHA~Sla~~gf~Vdli---Gy~~s 51 (444)
T KOG2941|consen 13 KRAIVVVLGD---VGRSPRMQYHALSLAKLGFQVDLI---GYVES 51 (444)
T ss_pred ceEEEEEecc---cCCChHHHHHHHHHHHcCCeEEEE---EecCC
Confidence 6677777774 577778888899999999877555 55444
No 418
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=25.23 E-value=1.1e+02 Score=21.57 Aligned_cols=20 Identities=30% Similarity=0.512 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCeEEEEeec
Q 026965 61 KGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~ 80 (230)
..++..|++.|+.|+.+|.-
T Consensus 13 l~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 13 LPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp HHHHHHHHHTTSEEEEE-S-
T ss_pred HHHHHHHHhCCCEEEEEeCC
Confidence 46788999999999999963
No 419
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=25.20 E-value=3.3e+02 Score=21.22 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=52.9
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCC-----------------CCccc---H-HHHHH
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASL-----------------TGFAE---V-EDVIA 102 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~-----------------~~~~~---~-~d~~~ 102 (230)
.|++-|-+ .........+++.+...|..++.+|.--.+........ ...+. + .-..+
T Consensus 4 rIyVvgT~--DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A 81 (401)
T COG5441 4 RIYVVGTA--DTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEA 81 (401)
T ss_pred eEEEEecC--CCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHH
Confidence 45555642 23334556677777888999999997532222111110 00011 1 12234
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhhccc
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVDEIE 136 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 136 (230)
+.+++.++-+..-++-+|-|.|..++.-.++..|
T Consensus 82 ~~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LP 115 (401)
T COG5441 82 FVRFLSSRGDVAGMIGMGGSGGTALITPAMRRLP 115 (401)
T ss_pred HHHHhhcccchhheeecCCCcchHhhhhHHHhcC
Confidence 5566666667777888899999998887666543
No 420
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=25.01 E-value=3.3e+02 Score=21.10 Aligned_cols=84 Identities=12% Similarity=0.007 Sum_probs=48.4
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEec-chHHHHHHhhh
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSS-AGAPIAGSAVD 133 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S-~Gg~~a~~~~~ 133 (230)
-+...+..+.+++.+.|..-+.+. .|.+...... .++-.++++...+..+.+-.+++|-+ .+-.-+..+++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gi~v~-----GstGE~~~Lt---~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~ 97 (309)
T cd00952 26 VDLDETARLVERLIAAGVDGILTM-----GTFGECATLT---WEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTR 97 (309)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEC-----cccccchhCC---HHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHH
Confidence 445567788899999998877763 1222222222 35566666666666554444566664 56666666665
Q ss_pred cc--cceEEEEEcCC
Q 026965 134 EI--EQVVGYVSLGY 146 (230)
Q Consensus 134 ~~--~~~~~~~~~~~ 146 (230)
.. -...+++++.+
T Consensus 98 ~A~~~Gad~vlv~~P 112 (309)
T cd00952 98 ALLDLGADGTMLGRP 112 (309)
T ss_pred HHHHhCCCEEEECCC
Confidence 43 24455555433
No 421
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=24.94 E-value=1.5e+02 Score=21.55 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=14.6
Q ss_pred HHHHHHhCCCeEEEEeec
Q 026965 63 IASGLANKGFKAVTFDMR 80 (230)
Q Consensus 63 ~~~~l~~~g~~v~~~d~~ 80 (230)
-+..|+++|+.|+++|.-
T Consensus 51 da~~LA~~G~~V~avD~s 68 (218)
T PRK13255 51 DMLWLAEQGHEVLGVELS 68 (218)
T ss_pred hHHHHHhCCCeEEEEccC
Confidence 456677899999999974
No 422
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=24.89 E-value=1.6e+02 Score=21.29 Aligned_cols=18 Identities=17% Similarity=0.303 Sum_probs=14.9
Q ss_pred HHHHHHhCCCeEEEEeec
Q 026965 63 IASGLANKGFKAVTFDMR 80 (230)
Q Consensus 63 ~~~~l~~~g~~v~~~d~~ 80 (230)
-+..|+++|+.|+.+|.-
T Consensus 48 da~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 48 DLAWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHHHhCCCeEEEEeCC
Confidence 466778899999999974
No 423
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=24.88 E-value=1.4e+02 Score=21.74 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHhCCCeEEEEeecc
Q 026965 58 GLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
..-..++..|+++|++|+.+|.=.
T Consensus 17 t~a~nla~~la~~g~~VlliD~D~ 40 (246)
T TIGR03371 17 TLTANLASALKLLGEPVLAIDLDP 40 (246)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCCC
Confidence 344568889999999999999743
No 424
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=24.85 E-value=2.1e+02 Score=19.59 Aligned_cols=30 Identities=13% Similarity=0.148 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEecchHHHHH
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~ 129 (230)
..+..+++.+....+.+++.+++|. +.+..
T Consensus 122 ~R~~~~~~~l~~~~~~~~vlvVsHg--~~i~~ 151 (177)
T TIGR03162 122 QRVSEFLEELLKAHEGDNVLIVTHG--GVIRA 151 (177)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECH--HHHHH
Confidence 4455556666555556788898884 55544
No 425
>PRK10824 glutaredoxin-4; Provisional
Probab=24.76 E-value=2e+02 Score=18.54 Aligned_cols=78 Identities=10% Similarity=-0.017 Sum_probs=43.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.++|||..|.+. .....+.....+.|.+.|.....+|.-. -.++...+..+...--..+|++=|
T Consensus 15 ~~Vvvf~Kg~~~-~p~Cpyc~~ak~lL~~~~i~~~~idi~~---------------d~~~~~~l~~~sg~~TVPQIFI~G 78 (115)
T PRK10824 15 NPILLYMKGSPK-LPSCGFSAQAVQALSACGERFAYVDILQ---------------NPDIRAELPKYANWPTFPQLWVDG 78 (115)
T ss_pred CCEEEEECCCCC-CCCCchHHHHHHHHHHcCCCceEEEecC---------------CHHHHHHHHHHhCCCCCCeEEECC
Confidence 789999998531 1122233445566666665444444420 023444443333333456788889
Q ss_pred ecchHHHHHHhhhc
Q 026965 121 SSAGAPIAGSAVDE 134 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~ 134 (230)
...||.=-+..+.+
T Consensus 79 ~~IGG~ddl~~l~~ 92 (115)
T PRK10824 79 ELVGGCDIVIEMYQ 92 (115)
T ss_pred EEEcChHHHHHHHH
Confidence 99999977755543
No 426
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=24.71 E-value=1.8e+02 Score=18.08 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=36.0
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhh
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~ 132 (230)
....+.+.+......++.+|..-.|. +....++.+..... .+-++-||+++.++..+.
T Consensus 6 ~~~~~~~li~~~a~d~~~~~~~~~GG------------it~~~~i~~~A~~~----gi~~~~h~~~~~i~~aa~ 63 (111)
T PF13378_consen 6 SLHDFRRLIEAGAVDIVQIDPTRCGG------------ITEALRIAALAEAH----GIPVMPHSMESGIGLAAS 63 (111)
T ss_dssp SHHHHHHHHHTTSCSEEEEBHHHHTS------------HHHHHHHHHHHHHT----T-EEEEBSSSSHHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEeCchhcCC------------HHHHHHHHHHHHHh----CCCEEecCCCCcHHHHHH
Confidence 34556667777778899999764443 45566666555443 456777887766666433
No 427
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=24.70 E-value=25 Score=24.63 Aligned_cols=40 Identities=10% Similarity=0.181 Sum_probs=0.0
Q ss_pred ceeEEEECCCCCCCCC---------chhhHH-HHHHHHhCCCeEEEEeec
Q 026965 41 SLAIVLVHPYSILGGC---------QGLLKG-IASGLANKGFKAVTFDMR 80 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~---------~~~~~~-~~~~l~~~g~~v~~~d~~ 80 (230)
.+.||++||.|...+. ...... +.+...++||.|+.++..
T Consensus 99 ~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~ 148 (178)
T PF09757_consen 99 KKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPN 148 (178)
T ss_dssp --------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7789999997520000 011112 555666778888887764
No 428
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=24.64 E-value=1.9e+02 Score=20.44 Aligned_cols=21 Identities=29% Similarity=0.404 Sum_probs=17.8
Q ss_pred hhHHHHHHHHhCCCeEEEEee
Q 026965 59 LLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~ 79 (230)
.-..++..++..|++|+.+|.
T Consensus 34 ~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 34 TSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred HHHHHHHHHHhCCCeEEEEeC
Confidence 456788899999999999986
No 429
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=24.38 E-value=3.8e+02 Score=21.61 Aligned_cols=60 Identities=13% Similarity=0.100 Sum_probs=35.7
Q ss_pred CCCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccCh-------hhHHHHHHHHHHHHhh
Q 026965 167 PKPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGP-------AYDAQMVNLILDFIAS 229 (230)
Q Consensus 167 ~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-------~~~~~~~~~i~~fl~~ 229 (230)
..|++++||--......... +..+..+.+++.++=-||..-+.+ ...+.+.+.+.+|+++
T Consensus 127 ~~~ivllHG~~~~~~~w~~~---~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~ 193 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYRKV---LPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDE 193 (383)
T ss_pred CCeEEEECCCCCCHHHHHHH---HHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHH
Confidence 35899999986654433333 333334567777776677633222 1234667777777764
No 430
>PF04270 Strep_his_triad: Streptococcal histidine triad protein ; InterPro: IPR006270 This entry represents a repeated sequence region that includes a His-X-X-His-X-His (histidine triad) motif, which is found in family of Streptococcal proteins. Members of the family are suggested to cleave human complement component 3, and family member PhpA has been shown in vaccine studies to be a protective antigen in mice []. ; PDB: 2CS7_C.
Probab=24.36 E-value=85 Score=17.05 Aligned_cols=32 Identities=13% Similarity=0.274 Sum_probs=17.7
Q ss_pred EEEEecCCCcc-cccChhhHHHHHHHHHHHHhh
Q 026965 198 ETHLIEGASHF-QMEGPAYDAQMVNLILDFIAS 229 (230)
Q Consensus 198 ~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~~ 229 (230)
.-.++|-++|+ ++...+..+.-.+..++|+++
T Consensus 20 ~gy~vpHgdH~HyI~k~dLs~~E~~aA~~~~~~ 52 (53)
T PF04270_consen 20 DGYVVPHGDHFHYIPKSDLSASELKAAQAYLAG 52 (53)
T ss_dssp SEEEEEETTEEEEEEGGGS-HHHHHHHHHHHH-
T ss_pred CeEEeeCCCcccCCchhhCCHHHHHHHHHHHhc
Confidence 34566667888 554444444446666677653
No 431
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=24.30 E-value=3.9e+02 Score=21.66 Aligned_cols=46 Identities=20% Similarity=0.285 Sum_probs=31.1
Q ss_pred ceeEEEECCCC----CCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 41 SLAIVLVHPYS----ILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 41 ~~~vi~~hG~~----~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
...||++||.. +..-+...|..+++.+.++|. +-.+|....|..++
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G 220 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG 220 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc
Confidence 45699999852 112234679999999999875 66678766655443
No 432
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=24.27 E-value=1.8e+02 Score=21.70 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=20.3
Q ss_pred EEECCCCCCCCCchhhHHH-HHHHHhC-CCeEEEEee
Q 026965 45 VLVHPYSILGGCQGLLKGI-ASGLANK-GFKAVTFDM 79 (230)
Q Consensus 45 i~~hG~~~~~~~~~~~~~~-~~~l~~~-g~~v~~~d~ 79 (230)
|.+.|=| +........+ +..+.++ ||+|+++|.
T Consensus 3 IaI~GKG--G~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 3 IAITGKG--GVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred EEEecCC--CccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 4455543 3334445555 6666665 499999985
No 433
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=24.22 E-value=1.4e+02 Score=20.29 Aligned_cols=23 Identities=26% Similarity=0.417 Sum_probs=18.6
Q ss_pred chhhHHHHHHHHhCCCeEEEEee
Q 026965 57 QGLLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 57 ~~~~~~~~~~l~~~g~~v~~~d~ 79 (230)
...-..++..++++|+.|+.+|.
T Consensus 14 tt~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 14 TTTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeC
Confidence 34456788999999999999985
No 434
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=24.03 E-value=3.7e+02 Score=21.35 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=23.7
Q ss_pred CCchhhHHHHHHHHhCCCeEE-EEeecccc
Q 026965 55 GCQGLLKGIASGLANKGFKAV-TFDMRGVG 83 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g 83 (230)
-+...+..+.++.+++|..|+ -+|.|||-
T Consensus 83 YT~~di~eiv~yA~~rgI~VIPEID~PGH~ 112 (357)
T cd06563 83 YTQEEIREIVAYAAERGITVIPEIDMPGHA 112 (357)
T ss_pred ECHHHHHHHHHHHHHcCCEEEEecCCchhH
Confidence 456678889999999999876 78999974
No 435
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=24.02 E-value=2.4e+02 Score=19.44 Aligned_cols=37 Identities=22% Similarity=0.456 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEEec--chHHHHHHhhhc
Q 026965 98 EDVIAVCKWVSENLPTNRILLVGSS--AGAPIAGSAVDE 134 (230)
Q Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S--~Gg~~a~~~~~~ 134 (230)
..+.+++++..-.+..+++.++|.| .|--++.++..+
T Consensus 21 ~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 21 LAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 4455555554334567899999999 577777777655
No 436
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.02 E-value=2.4e+02 Score=21.86 Aligned_cols=65 Identities=26% Similarity=0.328 Sum_probs=40.3
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCC----------CCCCCcccHHHHHHHHHHHHhhCC
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGK----------ASLTGFAEVEDVIAVCKWVSENLP 112 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~----------~~~~~~~~~~d~~~~~~~l~~~~~ 112 (230)
-++++-|+| +.-=+.++..++++|..++.+|.-..|..+.. ....+....+++....+.+++..+
T Consensus 39 ~~vLITGgg-----~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 39 EIVLITGGG-----SGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred CEEEEeCCC-----chHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 356666642 22336789999999998999987544322210 011122236888888888888765
No 437
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=23.93 E-value=1.4e+02 Score=23.00 Aligned_cols=38 Identities=18% Similarity=0.433 Sum_probs=26.8
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
+++++++.+ .++.......+++.|.++|+.|..+...+
T Consensus 2 il~~~~~~~-~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLG-LGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCC-CCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 345555543 46666777789999999999988776543
No 438
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=23.91 E-value=95 Score=20.13 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=20.2
Q ss_pred CCCchhhHHHHHHHHhCCCeEEEEeecc
Q 026965 54 GGCQGLLKGIASGLANKGFKAVTFDMRG 81 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~~~d~~g 81 (230)
.++-.-+..+++.|.++|+.|...-.+.
T Consensus 9 ~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 9 RGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp HHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred hhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 5666667788999999999997664443
No 439
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=23.85 E-value=2.3e+02 Score=21.21 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=25.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 79 (230)
..+|.+.-+-++ .+....-..++..++..|..|+.+|.
T Consensus 103 ~~vi~vts~~~g-~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 103 RKALAVVSAKSG-EGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CeEEEEECCCCC-CCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 455666655431 22233356788899999999999997
No 440
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=23.83 E-value=2.7e+02 Score=19.71 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=24.7
Q ss_pred ceeEEEECCCCCCCCCchh---hHHHHHHHHhCCCeEEEEe
Q 026965 41 SLAIVLVHPYSILGGCQGL---LKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~---~~~~~~~l~~~g~~v~~~d 78 (230)
+++||+++...|...+... +....+.+.+.|..|+.+.
T Consensus 32 k~vvL~F~P~~~~p~C~~el~~l~~~~~~f~~~g~~vigIS 72 (187)
T PRK10382 32 RWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVS 72 (187)
T ss_pred CeEEEEEECCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 5778887755444444443 3345566777889998885
No 441
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=23.80 E-value=1.3e+02 Score=24.32 Aligned_cols=22 Identities=23% Similarity=0.384 Sum_probs=18.5
Q ss_pred hhHHHHHHHHhCCCeEEEEeec
Q 026965 59 LLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.-..++..|+.+|+.|+++|.=
T Consensus 138 ta~nLA~~LA~~G~rVLlIDlD 159 (405)
T PRK13869 138 TSAHLAQYLALQGYRVLAVDLD 159 (405)
T ss_pred HHHHHHHHHHhcCCceEEEcCC
Confidence 4567888999999999999973
No 442
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.73 E-value=4.2e+02 Score=21.93 Aligned_cols=59 Identities=19% Similarity=0.177 Sum_probs=38.7
Q ss_pred HHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhhc
Q 026965 65 SGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVDE 134 (230)
Q Consensus 65 ~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 134 (230)
+.+.+.+|.|+.+|-.|.-.- -+++.+-+..+.+.+.+..+.++--|+=|.-|...|..
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~i-----------de~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~a 234 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLHI-----------DEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKA 234 (451)
T ss_pred HHHHHcCCCEEEEeCCCcccc-----------cHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHH
Confidence 344445667777765543111 15566666666677788888888888888888877653
No 443
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=23.71 E-value=1.1e+02 Score=23.53 Aligned_cols=30 Identities=33% Similarity=0.227 Sum_probs=20.1
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
+++.+.++ +..+=.+.|.|.|+.++..++.
T Consensus 87 vl~aL~e~-~l~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQ-DLLPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHc-CCCCCEEEEEcHHHHHHHHHHc
Confidence 44444443 3334479999999999997764
No 444
>PLN02361 alpha-amylase
Probab=23.64 E-value=3.9e+02 Score=21.76 Aligned_cols=80 Identities=8% Similarity=0.160 Sum_probs=43.3
Q ss_pred EEEECCCCCCCCCchhhHHH---HHHHHhCCCeEEEEeecccccCCCCCC-------CCCcccHHHHHHHHHHHHhhCCC
Q 026965 44 IVLVHPYSILGGCQGLLKGI---ASGLANKGFKAVTFDMRGVGRSTGKAS-------LTGFAEVEDVIAVCKWVSENLPT 113 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~---~~~l~~~g~~v~~~d~~g~g~s~~~~~-------~~~~~~~~d~~~~~~~l~~~~~~ 113 (230)
-|+++|+-|.......|..+ +++|.+.|+..+-+..+..+.+..-.. ...+-..++++.+++.+.++ +.
T Consensus 12 ~v~lQ~F~W~~~~~~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~-gi 90 (401)
T PLN02361 12 EILLQAFNWESHKHDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQY-NV 90 (401)
T ss_pred cEEEEEEeccCCccHHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHc-CC
Confidence 46678886644333445555 467788899988776554322221000 01111267888888887654 33
Q ss_pred CcE--EEEEecch
Q 026965 114 NRI--LLVGSSAG 124 (230)
Q Consensus 114 ~~i--~l~G~S~G 124 (230)
+-+ +++-|..|
T Consensus 91 ~vi~D~V~NH~~g 103 (401)
T PLN02361 91 RAMADIVINHRVG 103 (401)
T ss_pred EEEEEEccccccC
Confidence 222 24456543
No 445
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.63 E-value=52 Score=25.80 Aligned_cols=16 Identities=25% Similarity=0.077 Sum_probs=13.8
Q ss_pred EEEEecchHHHHHHhh
Q 026965 117 LLVGSSAGAPIAGSAV 132 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~ 132 (230)
.++|||+|=+.|+.++
T Consensus 127 ~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 127 VCAGLSLGEYTALVFA 142 (343)
T ss_pred eeeeccHHHHHHHHHh
Confidence 6899999999888766
No 446
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=23.61 E-value=3.2e+02 Score=21.60 Aligned_cols=31 Identities=19% Similarity=0.165 Sum_probs=25.2
Q ss_pred CCchhhHHHHHHHHhCCCeEE-EEeecccccC
Q 026965 55 GCQGLLKGIASGLANKGFKAV-TFDMRGVGRS 85 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~-~~d~~g~g~s 85 (230)
-+...+..+.++.+++|..|+ -+|.|||-.+
T Consensus 67 YT~~di~eiv~yA~~rgI~vIPEID~PGH~~a 98 (348)
T cd06562 67 YTPEDVKEIVEYARLRGIRVIPEIDTPGHTGS 98 (348)
T ss_pred ECHHHHHHHHHHHHHcCCEEEEeccCchhhHH
Confidence 466778899999999998876 7899998543
No 447
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=23.52 E-value=1.1e+02 Score=19.59 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=23.5
Q ss_pred cEEEEE-ecchHHHHHHhhhcccceEEEEEcCCc
Q 026965 115 RILLVG-SSAGAPIAGSAVDEIEQVVGYVSLGYP 147 (230)
Q Consensus 115 ~i~l~G-~S~Gg~~a~~~~~~~~~~~~~~~~~~~ 147 (230)
|+.++| ..+.|.-.+.++..+|.+.-..+.+..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~ 34 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSS 34 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEEST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeec
Confidence 578898 788888778777667877765555433
No 448
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=23.44 E-value=2e+02 Score=17.92 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=18.9
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 77 (230)
.++||++.++ . ...-...+..|...|+.+..+
T Consensus 65 ~~vvvyc~~g----~-~~~s~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 65 KLFVVYCDGP----G-CNGATKAALKLAELGFPVKEM 96 (110)
T ss_pred CeEEEEECCC----C-CchHHHHHHHHHHcCCeEEEe
Confidence 5667776652 1 112344567778889985544
No 449
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=23.38 E-value=3.4e+02 Score=20.73 Aligned_cols=72 Identities=17% Similarity=0.019 Sum_probs=42.3
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccC-CCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHH
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRS-TGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIA 128 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s-~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a 128 (230)
.+...+..+++..++.|+.-+.+|--=.+.. ....+......-.|+.+++++.+++ .-.|.|..||-++.-.
T Consensus 29 ~~t~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~K--gVgi~lw~~~~~~~~~ 101 (273)
T PF10566_consen 29 ATTETQKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEK--GVGIWLWYHSETGGNV 101 (273)
T ss_dssp SSHHHHHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHT--T-EEEEEEECCHTTBH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHc--CCCEEEEEeCCcchhh
Confidence 4566788889999999999888874211100 0111111111247899999998876 3368999999884433
No 450
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=23.16 E-value=65 Score=24.79 Aligned_cols=17 Identities=29% Similarity=0.139 Sum_probs=14.4
Q ss_pred EEEEecchHHHHHHhhh
Q 026965 117 LLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~ 133 (230)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47799999999997764
No 451
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=23.13 E-value=3.4e+02 Score=20.54 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=36.3
Q ss_pred EECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchH
Q 026965 46 LVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGA 125 (230)
Q Consensus 46 ~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg 125 (230)
++||- --...-..+++.|.+.|+.+.-.-.-| +..+++.+.++.+.++ ..++++.-.+|-
T Consensus 13 lL~G~----ivdtNa~~la~~L~~~G~~v~~~~~Vg-------------D~~~~I~~~l~~a~~r---~D~vI~tGGLGP 72 (255)
T COG1058 13 LLSGR----IVDTNAAFLADELTELGVDLARITTVG-------------DNPDRIVEALREASER---ADVVITTGGLGP 72 (255)
T ss_pred eecCc----eecchHHHHHHHHHhcCceEEEEEecC-------------CCHHHHHHHHHHHHhC---CCEEEECCCcCC
Confidence 46663 334456778999999999887664331 1136677777666655 345555444443
No 452
>PRK07856 short chain dehydrogenase; Provisional
Probab=23.08 E-value=3e+02 Score=20.03 Aligned_cols=63 Identities=21% Similarity=0.248 Sum_probs=34.3
Q ss_pred hHHHHHHHHhCCCeEEEEeecccccCCCC---CCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecch
Q 026965 60 LKGIASGLANKGFKAVTFDMRGVGRSTGK---ASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAG 124 (230)
Q Consensus 60 ~~~~~~~l~~~g~~v~~~d~~g~g~s~~~---~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~G 124 (230)
=..+++.|+++|+.|+..+...-...... ....+....+++.++++.+.+.++ ++.++=|+.|
T Consensus 19 G~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~vi~~ag 84 (252)
T PRK07856 19 GAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHG--RLDVLVNNAG 84 (252)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEEECCC
Confidence 35678889999999998876421100000 011122224567777776666543 4444555554
No 453
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=23.02 E-value=4e+02 Score=21.34 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=25.4
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeeccccc
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGR 84 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~ 84 (230)
..+++.+.|+ -++ .--+..|.++||.|+.+-+..+..
T Consensus 4 ~kV~v~mSGG----VDS---SVaA~lLk~QGyeViGl~m~~~~~ 40 (356)
T COG0482 4 KKVLVGMSGG----VDS---SVAAYLLKEQGYEVIGLFMKNWDE 40 (356)
T ss_pred cEEEEEccCC----HHH---HHHHHHHHHcCCeEEEEEEEeecc
Confidence 5678888875 222 123456677899999998886654
No 454
>PRK05568 flavodoxin; Provisional
Probab=23.00 E-value=2.3e+02 Score=18.56 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=22.4
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
+|++.-+. +.+...-..+++.+.+.|..+-..+..
T Consensus 5 ~IvY~S~~---GnT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 5 NIIYWSGT---GNTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred EEEEECCC---chHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 44554443 455555566777777788888777765
No 455
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=22.98 E-value=2.6e+02 Score=19.22 Aligned_cols=45 Identities=18% Similarity=0.338 Sum_probs=25.1
Q ss_pred CCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHH
Q 026965 71 GFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAP 126 (230)
Q Consensus 71 g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~ 126 (230)
+-.+++.|-+|--.++ +++.+.++.....-..+-++++|-+.|=.
T Consensus 67 ~~~~i~LDe~Gk~~sS-----------~~fA~~l~~~~~~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 67 GARVIALDERGKQLSS-----------EEFAQELERWRDDGRSDVAFVIGGADGLS 111 (157)
T ss_pred CCEEEEEcCCCCcCCH-----------HHHHHHHHHHHhcCCccEEEEEcCccccC
Confidence 3457788877643332 56666665443332234567778777633
No 456
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=22.88 E-value=2.8e+02 Score=19.57 Aligned_cols=55 Identities=22% Similarity=0.176 Sum_probs=28.2
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEe
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGS 121 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~ 121 (230)
.-..+++.+++..-.++++|+--. .......+.+..+++.+++..+..+|+++-+
T Consensus 47 le~~~a~~ia~~~a~~~~ld~~~N--------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 47 LEPEVADLIAEIDADLIVLDCGPN--------MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp --HHHHHHHHHS--SEEEEEESHH--------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred cCHHHHHHHhcCCCCEEEEEeecC--------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 334455666655456666665322 1111114667777888888777778777754
No 457
>COG5039 Exopolysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=22.83 E-value=1.3e+02 Score=23.22 Aligned_cols=35 Identities=11% Similarity=0.183 Sum_probs=22.4
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhC--CCeEEEE
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANK--GFKAVTF 77 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~--g~~v~~~ 77 (230)
-+|+++|+|..|.-...+..+.+...+. .|.++.+
T Consensus 88 ~~i~~~GGGNlGDLypd~q~fRe~Iistf~d~~iI~l 124 (339)
T COG5039 88 DIIFFTGGGNLGDLYPDYQNFREKIISTFPDYKIIIL 124 (339)
T ss_pred ceEEEeCCCchhhcchhhHHHHHHHHHhCCCCceEec
Confidence 4899999876666566666666655543 3555544
No 458
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=22.80 E-value=1.1e+02 Score=21.54 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhh-CCCCcEEEEEecchHHHHHHhhh
Q 026965 98 EDVIAVCKWVSEN-LPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 98 ~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
--++.+++|+-.. +..+++.+++.|.|+.-+..+..
T Consensus 84 g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~~~~~~a~~ 120 (184)
T COG0431 84 GALKNAIDWLSREALGGKPVLLLGTSGGGAGGLRAQN 120 (184)
T ss_pred HHHHHHHHhCCHhHhCCCcEEEEecCCCchhHHHHHH
Confidence 4456667776444 66778888888887777665543
No 459
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=22.80 E-value=2.8e+02 Score=19.44 Aligned_cols=53 Identities=9% Similarity=0.152 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCeEEEEeecccccCCCCC---CCCCcccHHHHHHHHHHHHhhCCCCc
Q 026965 61 KGIASGLANKGFKAVTFDMRGVGRSTGKA---SLTGFAEVEDVIAVCKWVSENLPTNR 115 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~ 115 (230)
....+.|..++|.|..+|+.-..+.+... ....+ .+.-..+++.+.+.+..++
T Consensus 17 Sacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~sw--tEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 17 SACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSW--TEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred HHHHHHHHhcCeEEEEEeecccccccceEEecCCcch--hHHHHHHHHHHHHhhcccc
Confidence 45678888999999999987544333211 11222 3445556665555544433
No 460
>PRK04435 hypothetical protein; Provisional
Probab=22.63 E-value=2.5e+02 Score=18.93 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=46.7
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecc--cccCCCCCCCCCcccH-HHHHHHHHHHHhhCCCCcEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRG--VGRSTGKASLTGFAEV-EDVIAVCKWVSENLPTNRIL 117 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g--~g~s~~~~~~~~~~~~-~d~~~~~~~l~~~~~~~~i~ 117 (230)
+++-|.++. .........+...+++.|.+++.++..- .|...-.-.... ... .++.++++.++..-+..++-
T Consensus 68 r~vtL~i~l----~Dr~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVev-s~~~~~L~~Li~~L~~i~gV~~V~ 142 (147)
T PRK04435 68 KIITLSLLL----EDRSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDT-SSMEGDIDELLEKLRNLDGVEKVE 142 (147)
T ss_pred cEEEEEEEE----ecCCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEe-CChHHHHHHHHHHHHcCCCcEEEE
Confidence 556666655 3445667889999999999999987631 110000000111 113 37778888887776777888
Q ss_pred EEEe
Q 026965 118 LVGS 121 (230)
Q Consensus 118 l~G~ 121 (230)
++|.
T Consensus 143 i~~~ 146 (147)
T PRK04435 143 LIGM 146 (147)
T ss_pred EEec
Confidence 8874
No 461
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=22.60 E-value=1.9e+02 Score=21.28 Aligned_cols=18 Identities=17% Similarity=0.213 Sum_probs=15.2
Q ss_pred HHHHHHhCCCeEEEEeec
Q 026965 63 IASGLANKGFKAVTFDMR 80 (230)
Q Consensus 63 ~~~~l~~~g~~v~~~d~~ 80 (230)
-+.+|+++||.|+.+|+.
T Consensus 57 D~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 57 DMLFFLSKGVKVIGIELS 74 (226)
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 367788899999999985
No 462
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=22.59 E-value=98 Score=23.10 Aligned_cols=21 Identities=10% Similarity=0.203 Sum_probs=18.1
Q ss_pred hHHHHHHHHhCCCeEEEEeec
Q 026965 60 LKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 60 ~~~~~~~l~~~g~~v~~~d~~ 80 (230)
-..++..|+++|++|+.+|.=
T Consensus 17 ~~nLA~~La~~g~rVLliD~D 37 (268)
T TIGR01281 17 SSNLSVAFAKLGKRVLQIGCD 37 (268)
T ss_pred HHHHHHHHHhCCCeEEEEecC
Confidence 467888999999999999974
No 463
>cd04893 ACT_GcvR_1 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the first of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR int
Probab=22.48 E-value=1.7e+02 Score=16.92 Aligned_cols=66 Identities=11% Similarity=0.158 Sum_probs=38.8
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCC---CCCCCCcccHHHHHHHHHHHHhhCCC
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTG---KASLTGFAEVEDVIAVCKWVSENLPT 113 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~---~~~~~~~~~~~d~~~~~~~l~~~~~~ 113 (230)
.+|-++| ......-..+.+.++++|.+++-.+..-.+..-. .-... ....+++.+.++.+.+.++.
T Consensus 2 ~iltv~g----~Dr~GiVa~vs~~la~~g~nI~d~~q~~~~~~F~m~~~~~~~-~~~~~~l~~~l~~~~~~~~l 70 (77)
T cd04893 2 LVISALG----TDRPGILNELTRAVSESGCNILDSRMAILGTEFALTMLVEGS-WDAIAKLEAALPGLARRLDL 70 (77)
T ss_pred EEEEEEe----CCCChHHHHHHHHHHHcCCCEEEceeeEEcCEEEEEEEEEec-cccHHHHHHHHHHHHHHcCC
Confidence 4667777 4666777889999999999988777643211000 00000 11246666666666655443
No 464
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=22.46 E-value=3e+02 Score=19.67 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=25.2
Q ss_pred ceeEEEECCCCCCCCCchhh---HHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGLL---KGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~---~~~~~~l~~~g~~v~~~d~ 79 (230)
+++||+.|...+...+.... ..+.+.+.++|..++.+..
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~ 67 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSV 67 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 45777788765444444433 4455677788999888853
No 465
>COG5483 Uncharacterized conserved protein [Function unknown]
Probab=22.40 E-value=2.1e+02 Score=21.20 Aligned_cols=66 Identities=17% Similarity=0.110 Sum_probs=39.9
Q ss_pred HHHHHHhCCCeEEEEeecccccCC---CCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecchHHHH
Q 026965 63 IASGLANKGFKAVTFDMRGVGRST---GKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSAGAPIA 128 (230)
Q Consensus 63 ~~~~l~~~g~~v~~~d~~g~g~s~---~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a 128 (230)
.+..|.++|++|+.+.-||.-.-. ..........++...+++..+...--..++.+.|-|+-++++
T Consensus 130 ~ad~L~sRg~rvlhI~~rg~~~eh~~trc~~~f~~p~i~~~~~v~~d~~~~~~s~~~~~~~~sl~~~~~ 198 (289)
T COG5483 130 PADTLKSRGLRVLHIQERGLFTEHYETRCIDLFLNPLIQNSIDVLVDVRKNPFSMKFDFTKNSLKNYLE 198 (289)
T ss_pred hHHHHHhccceEEEEecCCceeeeccceeHHHHcCchHHHHHHHHHHHccCCccceeeeecchhhcccc
Confidence 467888899999999888742211 111111222245555555555554445688999988766554
No 466
>PRK13191 putative peroxiredoxin; Provisional
Probab=22.33 E-value=3.1e+02 Score=19.89 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=26.2
Q ss_pred ceeEEEECCCCCCCCCchh---hHHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGL---LKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~---~~~~~~~l~~~g~~v~~~d~ 79 (230)
+++||+.|...|...+... +....+.+.++|..|+.+..
T Consensus 34 K~vvLff~pa~ftpvC~tEl~~l~~~~~ef~~~g~~VigvS~ 75 (215)
T PRK13191 34 RWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSV 75 (215)
T ss_pred CcEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5677778876554544443 34456777788999998863
No 467
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.23 E-value=1.4e+02 Score=22.38 Aligned_cols=31 Identities=29% Similarity=0.269 Sum_probs=20.7
Q ss_pred HHHHHHHhhCCCC----cEEEEEecchHHHHHHhhh
Q 026965 102 AVCKWVSENLPTN----RILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 102 ~~~~~l~~~~~~~----~i~l~G~S~Gg~~a~~~~~ 133 (230)
-+++.+.++ +.. .-.+.|-|.|+.++..++.
T Consensus 21 GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~ 55 (249)
T cd07220 21 GVASCLLEH-APFLVANARKIYGASAGALTATALVT 55 (249)
T ss_pred HHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHc
Confidence 355555554 221 3468899999999997664
No 468
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=22.14 E-value=72 Score=24.08 Aligned_cols=35 Identities=23% Similarity=0.282 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEEecchHHHHHHhhh
Q 026965 99 DVIAVCKWVSENLPTNRILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 99 d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~~~ 133 (230)
...+.+++....++.++|.++|||.=|.++..+.-
T Consensus 139 ~~~AalE~aV~~lkvenIiv~ghs~cgGik~~m~~ 173 (276)
T KOG1578|consen 139 NVGAALEYAVTTLKVENIIVIGHSLCGGIKGLMSF 173 (276)
T ss_pred cccchHHHHHHHhccceEEEeccccCCchhhcccc
Confidence 34456677667788999999999998888775553
No 469
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=22.13 E-value=1e+02 Score=23.12 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=19.9
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccc
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
.-..++..|+++|++|+.+|.=-.|
T Consensus 16 ~a~nLA~~La~~G~~VlliD~D~q~ 40 (275)
T TIGR01287 16 TTQNIAAALAEMGKKVMIVGCDPKA 40 (275)
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3567899999999999999974333
No 470
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=22.12 E-value=1.3e+02 Score=21.04 Aligned_cols=28 Identities=18% Similarity=0.332 Sum_probs=16.9
Q ss_pred CCCchhhHHHHHHHHhCCCeEEEEeeccc
Q 026965 54 GGCQGLLKGIASGLANKGFKAVTFDMRGV 82 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 82 (230)
+++...-..++..|..+ |..-.+-+|..
T Consensus 50 GgSaadAqHfaael~gR-f~~eR~~lpaI 77 (176)
T COG0279 50 GGSAADAQHFAAELTGR-FEKERPSLPAI 77 (176)
T ss_pred CcchhhHHHHHHHHhhH-HHhcCCCCCee
Confidence 45666667777777765 55555544443
No 471
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.10 E-value=70 Score=24.36 Aligned_cols=17 Identities=41% Similarity=0.423 Sum_probs=14.8
Q ss_pred EEEEecchHHHHHHhhh
Q 026965 117 LLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 117 ~l~G~S~Gg~~a~~~~~ 133 (230)
.+.|-|.||.+|+.++.
T Consensus 37 ~i~GTSaGaiia~~la~ 53 (288)
T cd07213 37 LFAGTSAGSLIALGLAL 53 (288)
T ss_pred EEEEeCHHHHHHHHHHc
Confidence 57899999999998774
No 472
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=21.99 E-value=40 Score=22.80 Aligned_cols=13 Identities=46% Similarity=0.649 Sum_probs=11.2
Q ss_pred EEEEEecchHHHH
Q 026965 116 ILLVGSSAGAPIA 128 (230)
Q Consensus 116 i~l~G~S~Gg~~a 128 (230)
..++|.|.|+.+.
T Consensus 70 ~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 70 GVIIGTSAGAMIL 82 (154)
T ss_dssp SEEEEETHHHHCT
T ss_pred CEEEEEChHHhhc
Confidence 6889999999774
No 473
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.70 E-value=2.3e+02 Score=22.18 Aligned_cols=37 Identities=24% Similarity=0.110 Sum_probs=25.5
Q ss_pred ceeEEEECCCCC-C--CCCchhhHHHHHHHHhCCCeEEEE
Q 026965 41 SLAIVLVHPYSI-L--GGCQGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 41 ~~~vi~~hG~~~-~--~~~~~~~~~~~~~l~~~g~~v~~~ 77 (230)
+|.|++.||... . .-....|..+++.+.++|+.|+.+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~ 214 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLF 214 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 478888888320 0 112346788999999999887776
No 474
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=21.69 E-value=1e+02 Score=23.01 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=18.6
Q ss_pred hhHHHHHHHHhCCCeEEEEeec
Q 026965 59 LLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
.-..++..|+++|++|+.+|.=
T Consensus 16 ~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 16 TSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred HHHHHHHHHHHCCCcEEEEecC
Confidence 3567889999999999999974
No 475
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=21.66 E-value=1.5e+02 Score=21.72 Aligned_cols=23 Identities=22% Similarity=0.335 Sum_probs=18.4
Q ss_pred hhhHHHHHHHHhCCCeEEEEeec
Q 026965 58 GLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 58 ~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
..-..++..|+++|+.|+.+|.=
T Consensus 16 t~a~~LA~~la~~g~~VlliD~D 38 (251)
T TIGR01969 16 TITANLGVALAKLGKKVLALDAD 38 (251)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCC
Confidence 33456888999999999999963
No 476
>PRK00870 haloalkane dehalogenase; Provisional
Probab=21.60 E-value=3.6e+02 Score=20.35 Aligned_cols=60 Identities=12% Similarity=0.074 Sum_probs=31.6
Q ss_pred CCEEEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcccccCh-----hhHHHHHHHHHHHHhh
Q 026965 168 KPKLFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHFQMEGP-----AYDAQMVNLILDFIAS 229 (230)
Q Consensus 168 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-----~~~~~~~~~i~~fl~~ 229 (230)
.|++++||.-..........+.+.+ .+.+++.++--||..-..+ ...+...+.+.+++++
T Consensus 47 ~~lvliHG~~~~~~~w~~~~~~L~~--~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~ 111 (302)
T PRK00870 47 PPVLLLHGEPSWSYLYRKMIPILAA--AGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQ 111 (302)
T ss_pred CEEEEECCCCCchhhHHHHHHHHHh--CCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence 4799999964332222222222222 2466677666667632211 1234667777777764
No 477
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=21.58 E-value=2.7e+02 Score=18.82 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=52.0
Q ss_pred HHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCc-EEEEEecchHHHHHHhhhcccceE
Q 026965 61 KGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNR-ILLVGSSAGAPIAGSAVDEIEQVV 139 (230)
Q Consensus 61 ~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~ 139 (230)
..+.++|.++||.|+ |+ |. .+ ...+ .+-...+.+.+.+. ..++ |.+.|.-.| ...+|.+.+.+.
T Consensus 16 ~~i~~~L~~~G~eV~--D~-G~--~~----~~dY--pd~a~~va~~V~~~-e~~~GIliCGtGiG---~siaANK~~GIR 80 (141)
T TIGR01118 16 DVIKNFLVDNGFEVI--DV-TE--GD----GQDF--VDVTLAVASEVQKD-EQNLGIVIDAYGAG---SFMVATKIKGMI 80 (141)
T ss_pred HHHHHHHHHCCCEEE--Ec-CC--CC----CCCc--HHHHHHHHHHHHcC-CCceEEEEcCCCHh---HhhhhhcCCCeE
Confidence 457889999999874 43 22 11 1111 12223333333332 2333 333343333 224455677888
Q ss_pred EEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCcccCHHHHHHHHHhcc
Q 026965 140 GYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFTSVKQLQNKLSSAA 194 (230)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~ 194 (230)
+.+.......... -......+|.+-+ .++..+.+.+..+...
T Consensus 81 AA~~~d~~~A~~a----------r~hNnaNVL~lG~---r~~g~~~a~~iv~~fL 122 (141)
T TIGR01118 81 AAEVSDERSAYMT----------RGHNNARMITVGA---EIVGDELAKNIVKAFV 122 (141)
T ss_pred EEEECCHHHHHHH----------HHHcCCcEEEECc---cccCHHHHHHHHHHHH
Confidence 7776532221111 1123567777766 3566676665555543
No 478
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=21.51 E-value=1.1e+02 Score=22.91 Aligned_cols=25 Identities=12% Similarity=0.126 Sum_probs=20.0
Q ss_pred hhHHHHHHHHhCCCeEEEEeecccc
Q 026965 59 LLKGIASGLANKGFKAVTFDMRGVG 83 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~~g~g 83 (230)
.-..++..|+++|++|+.+|.=-.|
T Consensus 18 ~~~nLA~~la~~G~kVLliD~Dpq~ 42 (270)
T PRK13185 18 TSSNLSAAFAKLGKKVLQIGCDPKH 42 (270)
T ss_pred HHHHHHHHHHHCCCeEEEEeccCCc
Confidence 3567899999999999999974333
No 479
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=21.49 E-value=1.2e+02 Score=20.10 Aligned_cols=27 Identities=22% Similarity=0.454 Sum_probs=20.7
Q ss_pred CCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 54 GGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 54 ~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
+|.......+++.|+++|+.|..+...
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 566667788999999999998888543
No 480
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional
Probab=21.46 E-value=1.6e+02 Score=23.01 Aligned_cols=6 Identities=50% Similarity=0.528 Sum_probs=2.6
Q ss_pred CCEEEE
Q 026965 168 KPKLFV 173 (230)
Q Consensus 168 ~p~l~i 173 (230)
.|++.+
T Consensus 68 ~pvl~V 73 (312)
T PRK12563 68 FPLLHV 73 (312)
T ss_pred eeEEEe
Confidence 344443
No 481
>PRK07933 thymidylate kinase; Validated
Probab=21.33 E-value=2.6e+02 Score=20.23 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=27.7
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccC
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRS 85 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s 85 (230)
+|.+=|.-+ .+-...-..+.++|.++|+.|+....|.+|.+
T Consensus 2 ~IviEG~dG-sGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDG-AGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCC-CCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 344555421 22334566788999999999999999966543
No 482
>PTZ00062 glutaredoxin; Provisional
Probab=21.32 E-value=3.3e+02 Score=19.72 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=46.5
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEE
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVG 120 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G 120 (230)
.|++||..|-+. ...-.......+.|.+.|.....+|... -.++.+.+..+...-....+++=|
T Consensus 113 ~~Vvvf~Kg~~~-~p~C~~C~~~k~~L~~~~i~y~~~DI~~---------------d~~~~~~l~~~sg~~TvPqVfI~G 176 (204)
T PTZ00062 113 HKILLFMKGSKT-FPFCRFSNAVVNMLNSSGVKYETYNIFE---------------DPDLREELKVYSNWPTYPQLYVNG 176 (204)
T ss_pred CCEEEEEccCCC-CCCChhHHHHHHHHHHcCCCEEEEEcCC---------------CHHHHHHHHHHhCCCCCCeEEECC
Confidence 789999998531 1223344556677777777666666430 023444443333333345677778
Q ss_pred ecchHHHHHHhhhcccc
Q 026965 121 SSAGAPIAGSAVDEIEQ 137 (230)
Q Consensus 121 ~S~Gg~~a~~~~~~~~~ 137 (230)
--.||.--+..+.....
T Consensus 177 ~~IGG~d~l~~l~~~G~ 193 (204)
T PTZ00062 177 ELIGGHDIIKELYESNS 193 (204)
T ss_pred EEEcChHHHHHHHHcCC
Confidence 88899877755544333
No 483
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=21.26 E-value=1.6e+02 Score=17.47 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=20.6
Q ss_pred HHHHHHhhCCCCcEEEEEecchHHHHH
Q 026965 103 VCKWVSENLPTNRILLVGSSAGAPIAG 129 (230)
Q Consensus 103 ~~~~l~~~~~~~~i~l~G~S~Gg~~a~ 129 (230)
+-.+++.....+++.++.+..||..+.
T Consensus 5 ~~afLKnAWaKEPVlvvSf~ig~lavi 31 (84)
T PF14987_consen 5 LGAFLKNAWAKEPVLVVSFVIGGLAVI 31 (84)
T ss_pred HHHHHHHhhhcCCeEEeeehhhhhhhh
Confidence 445666777889999999998887654
No 484
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=21.22 E-value=1.5e+02 Score=22.23 Aligned_cols=19 Identities=26% Similarity=0.307 Sum_probs=15.7
Q ss_pred cEEEEEecchHHHHHHhhh
Q 026965 115 RILLVGSSAGAPIAGSAVD 133 (230)
Q Consensus 115 ~i~l~G~S~Gg~~a~~~~~ 133 (230)
.-.++|-|.|+.++..++.
T Consensus 33 ~~~i~GtSAGAl~aa~~as 51 (252)
T cd07221 33 ARMFFGASAGALHCVTFLS 51 (252)
T ss_pred CCEEEEEcHHHHHHHHHHh
Confidence 3469999999999997764
No 485
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=21.09 E-value=65 Score=26.43 Aligned_cols=50 Identities=10% Similarity=0.163 Sum_probs=31.3
Q ss_pred EEEecCCCcccCHHHHHHHHHhccCceEEEEecCCCcc-cccChhhHHHHHHHHHHHHh
Q 026965 171 LFVMGTRDGFTSVKQLQNKLSSAAGRVETHLIEGASHF-QMEGPAYDAQMVNLILDFIA 228 (230)
Q Consensus 171 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~-~~~~~~~~~~~~~~i~~fl~ 228 (230)
-++.+..|-.|+.+.++ ... ...+....++ +.|. ++.++ ++.+.|.+||.
T Consensus 370 ~~~y~dGDGTV~~~S~~-~~~--~~~~~~~~l~-~~H~~il~n~----~v~~~I~~fL~ 420 (440)
T PLN02733 370 EYTYVDGDGTVPVESAK-ADG--LNAVARVGVP-GDHRGILRDE----HVFRILKHWLK 420 (440)
T ss_pred eEEEeCCCCEEecchhh-ccC--ccccccccCC-chHHHHhcCH----HHHHHHHHHHh
Confidence 45566777788776654 111 1234445566 7899 66554 77788888875
No 486
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=21.04 E-value=1.9e+02 Score=21.03 Aligned_cols=105 Identities=16% Similarity=0.207 Sum_probs=52.2
Q ss_pred CCCCcEEEEEecchHHHHHHhhhc----cc---c--eEEEEEcCCcchhhhhhhcccccccccCCCCCEEEEecCCCccc
Q 026965 111 LPTNRILLVGSSAGAPIAGSAVDE----IE---Q--VVGYVSLGYPFGMMASILFGRHHKAILKSPKPKLFVMGTRDGFT 181 (230)
Q Consensus 111 ~~~~~i~l~G~S~Gg~~a~~~~~~----~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~ 181 (230)
++..+.-++|.++|=.+...+..- .+ + ....+++. ....+...++ .++.-.-++..-+|.++
T Consensus 89 ld~mkkkvlGICFGHQiiara~Gg~Vgra~KG~~~~lg~itivk--~~~~~~~yFG-------~~~~~l~IikcHqDevl 159 (245)
T KOG3179|consen 89 LDFMKKKVLGICFGHQIIARAKGGKVGRAPKGPDLGLGSITIVK--DAEKPEKYFG-------EIPKSLNIIKCHQDEVL 159 (245)
T ss_pred HHhhccceEEEeccHHHHHHhhCCccccCCCCCcccccceEEEE--ecccchhhcc-------cchhhhhHHhhccccee
Confidence 344457789999998888876631 11 1 11122111 0111112222 12223334556678876
Q ss_pred CH-HHHHHHHHhccCceEEEEecCCCcc--cccChhhHHHHHHHHHHH
Q 026965 182 SV-KQLQNKLSSAAGRVETHLIEGASHF--QMEGPAYDAQMVNLILDF 226 (230)
Q Consensus 182 ~~-~~~~~~~~~~~~~~~~~~~~~~~H~--~~~~~~~~~~~~~~i~~f 226 (230)
.. +.++ .+. ...++++..+--..|. +...|++..+++..+.+-
T Consensus 160 e~PE~a~-lla-sSe~ceve~fs~~~~~l~fQGHPEyn~eil~~ivdr 205 (245)
T KOG3179|consen 160 ELPEGAE-LLA-SSEKCEVEMFSIEDHLLCFQGHPEYNKEILFEIVDR 205 (245)
T ss_pred cCCchhh-hhc-cccccceEEEEecceEEEecCCchhhHHHHHHHHHH
Confidence 53 4443 322 2234555555445677 556788777766655543
No 487
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=20.97 E-value=1.8e+02 Score=22.68 Aligned_cols=13 Identities=8% Similarity=0.250 Sum_probs=10.9
Q ss_pred CCceeEEEECCCC
Q 026965 39 SSSLAIVLVHPYS 51 (230)
Q Consensus 39 ~~~~~vi~~hG~~ 51 (230)
+++|.++-+||++
T Consensus 107 p~KPLvLSfHG~t 119 (344)
T KOG2170|consen 107 PRKPLVLSFHGWT 119 (344)
T ss_pred CCCCeEEEecCCC
Confidence 3489999999994
No 488
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=20.96 E-value=3e+02 Score=19.12 Aligned_cols=51 Identities=12% Similarity=0.197 Sum_probs=32.3
Q ss_pred CchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEEEecc
Q 026965 56 CQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLVGSSA 123 (230)
Q Consensus 56 ~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~G~S~ 123 (230)
.-..+..+...+.. |..|+.+|.- .+-+.++.+.+..+-+.+.++++.|.-
T Consensus 8 ~v~d~~~L~~~l~~-~~~v~~ld~~----------------~d~~~qI~~~L~~~~~i~~lhivsHG~ 58 (165)
T PF14252_consen 8 RVEDYESLLAGLPP-GVEVVILDPS----------------RDGLEQIAQALAGYQNIDALHIVSHGS 58 (165)
T ss_pred CCCCHHHHHhcCcC-CCEEEEEeCC----------------CchHHHHHHHHhcCCCCceEEEEcCCC
Confidence 34556666666664 5778888753 123444555555655678999998853
No 489
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=20.92 E-value=2.9e+02 Score=21.68 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=22.8
Q ss_pred CCchhhHHHHHHHHhCCCeEEEEeecccccCC
Q 026965 55 GCQGLLKGIASGLANKGFKAVTFDMRGVGRST 86 (230)
Q Consensus 55 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~ 86 (230)
+-...-..+++.|.++|+.+.++. ||||...
T Consensus 63 GKTP~v~~L~~~l~~~g~~~~ils-RGYg~~~ 93 (325)
T PRK00652 63 GKTPVVIALAEQLQARGLKPGVVS-RGYGGKL 93 (325)
T ss_pred ChHHHHHHHHHHHHHCCCeEEEEC-CCCCCCc
Confidence 444556678899999999887775 6887654
No 490
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=20.75 E-value=2.2e+02 Score=20.01 Aligned_cols=39 Identities=5% Similarity=-0.036 Sum_probs=23.3
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEee
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 79 (230)
..+|++.+.+............-.+.|.+.|+.|+-|+.
T Consensus 112 ~~pv~i~PaMn~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAMNTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCCCHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 345666664321122234456667888889998887764
No 491
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=20.73 E-value=3.8e+02 Score=20.27 Aligned_cols=103 Identities=15% Similarity=0.011 Sum_probs=58.8
Q ss_pred ceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCC-----------cccHHHHHHHHHHHHh
Q 026965 41 SLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTG-----------FAEVEDVIAVCKWVSE 109 (230)
Q Consensus 41 ~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~-----------~~~~~d~~~~~~~l~~ 109 (230)
...|.++-.+ .-+......+...|.+.|..++=+-.|- |++..+... -...+++.++++.++.
T Consensus 10 ~~li~yitaG---~P~~~~~~~~~~~l~~~GaD~iEiGiPf---SDP~ADGpvIq~A~~rAL~~G~~~~~~~~~~~~ir~ 83 (259)
T PF00290_consen 10 KALIPYITAG---YPDLETTLEILKALEEAGADIIEIGIPF---SDPVADGPVIQKASQRALKNGFTLEKIFELVKEIRK 83 (259)
T ss_dssp TEEEEEEETT---SSSHHHHHHHHHHHHHTTBSSEEEE--S---SSCTTSSHHHHHHHHHHHHTT--HHHHHHHHHHHHH
T ss_pred CeEEEEEeCC---CCCHHHHHHHHHHHHHcCCCEEEECCCC---CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHhc
Confidence 4455666554 3456677888999999999998887663 333222111 1125667777777775
Q ss_pred hCCCCcEEEEEec-----chHHHHHHhhhcccceEEEEEcCCcchh
Q 026965 110 NLPTNRILLVGSS-----AGAPIAGSAVDEIEQVVGYVSLGYPFGM 150 (230)
Q Consensus 110 ~~~~~~i~l~G~S-----~Gg~~a~~~~~~~~~~~~~~~~~~~~~~ 150 (230)
.....+++++++- +|----+..+ ....+.++++...|+..
T Consensus 84 ~~~~~pivlm~Y~N~i~~~G~e~F~~~~-~~aGvdGlIipDLP~ee 128 (259)
T PF00290_consen 84 KEPDIPIVLMTYYNPIFQYGIERFFKEA-KEAGVDGLIIPDLPPEE 128 (259)
T ss_dssp HCTSSEEEEEE-HHHHHHH-HHHHHHHH-HHHTEEEEEETTSBGGG
T ss_pred cCCCCCEEEEeeccHHhccchHHHHHHH-HHcCCCEEEEcCCChHH
Confidence 5566799999873 2211011111 12367888887777643
No 492
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=20.64 E-value=1.7e+02 Score=22.68 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=22.5
Q ss_pred EEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEE
Q 026965 44 IVLVHPYSILGGCQGLLKGIASGLANKGFKAVTF 77 (230)
Q Consensus 44 vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 77 (230)
||++-| ..+...-+.++-.|.++||.|++.
T Consensus 5 vVvI~G----s~~~PltR~la~DLeRRGFIV~v~ 34 (299)
T PF08643_consen 5 VVVIAG----SPHDPLTRSLALDLERRGFIVYVT 34 (299)
T ss_pred EEEEEC----CCCCccHHHHHHHHhhCCeEEEEE
Confidence 555656 345566678899999999998766
No 493
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.58 E-value=2.5e+02 Score=20.97 Aligned_cols=33 Identities=21% Similarity=0.105 Sum_probs=22.6
Q ss_pred eEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEe
Q 026965 43 AIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFD 78 (230)
Q Consensus 43 ~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 78 (230)
.|+++-|-| .+..+=.-.+++|..+|+.|.++-
T Consensus 62 ~V~VlcG~G---NNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPG---NNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCC---CCchhHHHHHHHHHHCCCeEEEEE
Confidence 466666753 444444567899999999987764
No 494
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=20.48 E-value=1.7e+02 Score=22.90 Aligned_cols=43 Identities=26% Similarity=0.505 Sum_probs=27.9
Q ss_pred eEEEECCCCCCCCC--chhhHHHHHHHHhCCCeEEEEeecccccCCC
Q 026965 43 AIVLVHPYSILGGC--QGLLKGIASGLANKGFKAVTFDMRGVGRSTG 87 (230)
Q Consensus 43 ~vi~~hG~~~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 87 (230)
+||.+-... .|++ ...-..+++.|.++|+.+.++. ||||....
T Consensus 36 pVIsVGNlt-vGGTGKTP~v~~L~~~L~~~G~~~~IlS-RGYg~~~~ 80 (326)
T PF02606_consen 36 PVISVGNLT-VGGTGKTPLVIWLARLLQARGYRPAILS-RGYGRKSK 80 (326)
T ss_pred cEEEEcccc-cCCCCchHHHHHHHHHHHhcCCceEEEc-CCCCCCCC
Confidence 455554332 2333 3455678899999999987776 68887654
No 495
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=20.46 E-value=1.4e+02 Score=20.34 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=17.6
Q ss_pred hhHHHHHHHHhCCCeEEEEee
Q 026965 59 LLKGIASGLANKGFKAVTFDM 79 (230)
Q Consensus 59 ~~~~~~~~l~~~g~~v~~~d~ 79 (230)
.-..++..+++.|++|+.+|.
T Consensus 16 ~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 16 VAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred HHHHHHHHHHHcCCcEEEEeC
Confidence 345688899999999999986
No 496
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=20.29 E-value=2.7e+02 Score=19.13 Aligned_cols=30 Identities=17% Similarity=-0.030 Sum_probs=15.7
Q ss_pred CCcEEEEEecchHHHHHHhhhcccc-eEEEE
Q 026965 113 TNRILLVGSSAGAPIAGSAVDEIEQ-VVGYV 142 (230)
Q Consensus 113 ~~~i~l~G~S~Gg~~a~~~~~~~~~-~~~~~ 142 (230)
.++|.++|-|..|..-+.++...++ +..++
T Consensus 68 gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 68 GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp T--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred CCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 5789999999999988877765444 33333
No 497
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=20.29 E-value=1.4e+02 Score=22.46 Aligned_cols=40 Identities=18% Similarity=0.323 Sum_probs=31.9
Q ss_pred CceeEEEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeec
Q 026965 40 SSLAIVLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMR 80 (230)
Q Consensus 40 ~~~~vi~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 80 (230)
+..+|+++-|.-. .+-......+.+.|..+|++|+++--|
T Consensus 72 ~~~vvivfEGrDA-AGKgG~Ikri~~~lNPR~~rvval~aP 111 (270)
T COG2326 72 GQRVVIVFEGRDA-AGKGGAIKRITEALNPRGARVVALPAP 111 (270)
T ss_pred CCeEEEEEecccc-cCCCchhHHHhhhcCCceeEEeecCCC
Confidence 3678888988752 455567889999999999999998765
No 498
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=20.27 E-value=3.9e+02 Score=20.15 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=30.0
Q ss_pred EEECCCCCCCCCchhhHHHHHHHHhCCCeEEEEeecccccCCCCCCCCCcccHHHHHHHHHHHHhhCCCCcEEEE
Q 026965 45 VLVHPYSILGGCQGLLKGIASGLANKGFKAVTFDMRGVGRSTGKASLTGFAEVEDVIAVCKWVSENLPTNRILLV 119 (230)
Q Consensus 45 i~~hG~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i~l~ 119 (230)
++++|..+. +-+.....+...+.+.|.+++-++--. +.++..+++.++.. ..+++|+
T Consensus 55 vLL~G~rGt-GKSSlVkall~~y~~~GLRlIev~k~~---------------L~~l~~l~~~l~~~--~~kFIlf 111 (249)
T PF05673_consen 55 VLLWGARGT-GKSSLVKALLNEYADQGLRLIEVSKED---------------LGDLPELLDLLRDR--PYKFILF 111 (249)
T ss_pred eEEecCCCC-CHHHHHHHHHHHHhhcCceEEEECHHH---------------hccHHHHHHHHhcC--CCCEEEE
Confidence 445665321 112334556677777777766664211 34566666666543 3466655
No 499
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=20.26 E-value=4e+02 Score=21.71 Aligned_cols=75 Identities=13% Similarity=-0.012 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHhC-----CCeEEEEeecccccCCCCCCCCCccc-HHHHHHHHHHHHhhCCCCcEEEEEecchHHHHHHh
Q 026965 58 GLLKGIASGLANK-----GFKAVTFDMRGVGRSTGKASLTGFAE-VEDVIAVCKWVSENLPTNRILLVGSSAGAPIAGSA 131 (230)
Q Consensus 58 ~~~~~~~~~l~~~-----g~~v~~~d~~g~g~s~~~~~~~~~~~-~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~ 131 (230)
..|..+.+.+... |..++++.+.|.-..-+....-.... -.++.+.+++|...++...+-+-.-|.|...+...
T Consensus 199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~As 278 (398)
T PRK13656 199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQAS 278 (398)
T ss_pred chHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Q ss_pred h
Q 026965 132 V 132 (230)
Q Consensus 132 ~ 132 (230)
.
T Consensus 279 s 279 (398)
T PRK13656 279 S 279 (398)
T ss_pred h
No 500
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.23 E-value=1.5e+02 Score=22.13 Aligned_cols=32 Identities=22% Similarity=0.187 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCC------cEEEEEecchHHHHHHhh
Q 026965 101 IAVCKWVSENLPTN------RILLVGSSAGAPIAGSAV 132 (230)
Q Consensus 101 ~~~~~~l~~~~~~~------~i~l~G~S~Gg~~a~~~~ 132 (230)
..+++.+.++++.. -=.+.|-|.||.+|+.++
T Consensus 15 ~~~L~~le~~~~~~~~~~~~fd~i~GtS~G~iia~~l~ 52 (258)
T cd07199 15 AEILAELEKRLGKPSRIADLFDLIAGTSTGGIIALGLA 52 (258)
T ss_pred HHHHHHHHHHhCCCCchhhccceeeeccHHHHHHHHHh
Done!