Query 026967
Match_columns 230
No_of_seqs 231 out of 2005
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 03:07:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026967.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026967hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02211 methyl indole-3-aceta 99.9 4.2E-21 9.1E-26 162.0 15.0 124 82-205 5-128 (273)
2 PLN02965 Probable pheophorbida 99.9 4E-21 8.7E-26 160.1 14.6 105 96-200 4-108 (255)
3 PLN02824 hydrolase, alpha/beta 99.9 6.5E-21 1.4E-25 161.8 15.6 116 82-199 16-137 (294)
4 PRK00870 haloalkane dehalogena 99.9 2.6E-20 5.6E-25 158.9 16.6 114 85-199 35-150 (302)
5 TIGR02240 PHA_depoly_arom poly 99.8 2.6E-20 5.5E-25 156.9 13.9 116 82-200 10-127 (276)
6 PRK03592 haloalkane dehalogena 99.8 1.5E-19 3.2E-24 153.6 17.3 114 82-199 15-128 (295)
7 PLN02679 hydrolase, alpha/beta 99.8 3.3E-19 7.3E-24 156.0 15.3 103 95-199 88-191 (360)
8 TIGR03343 biphenyl_bphD 2-hydr 99.8 4.2E-19 9.2E-24 149.1 15.3 114 83-198 19-135 (282)
9 TIGR03611 RutD pyrimidine util 99.8 3.3E-19 7.2E-24 146.3 13.6 107 93-201 11-117 (257)
10 PF12697 Abhydrolase_6: Alpha/ 99.8 2.4E-19 5.2E-24 143.4 12.4 101 98-200 1-102 (228)
11 KOG4178 Soluble epoxide hydrol 99.8 5.9E-19 1.3E-23 148.5 15.1 109 91-200 40-149 (322)
12 TIGR03056 bchO_mg_che_rel puta 99.8 1E-18 2.2E-23 145.8 15.7 116 82-199 14-130 (278)
13 PRK11126 2-succinyl-6-hydroxy- 99.8 5.2E-19 1.1E-23 145.4 13.7 100 95-199 2-102 (242)
14 PHA02857 monoglyceride lipase; 99.8 1.6E-18 3.5E-23 145.6 16.9 107 95-201 25-134 (276)
15 PLN02385 hydrolase; alpha/beta 99.8 1.2E-18 2.7E-23 151.7 15.8 107 94-200 86-198 (349)
16 PRK10673 acyl-CoA esterase; Pr 99.8 8.7E-19 1.9E-23 145.0 13.8 103 93-199 14-116 (255)
17 PRK10749 lysophospholipase L2; 99.8 2.8E-18 6E-23 148.5 16.6 117 82-199 39-166 (330)
18 PRK03204 haloalkane dehalogena 99.8 5E-18 1.1E-22 144.1 17.8 114 83-199 23-136 (286)
19 PLN03087 BODYGUARD 1 domain co 99.8 3.6E-18 7.8E-23 153.7 16.5 117 83-200 185-310 (481)
20 PLN02298 hydrolase, alpha/beta 99.8 2.5E-18 5.5E-23 148.4 14.9 119 82-200 41-170 (330)
21 PRK06489 hypothetical protein; 99.8 3E-18 6.5E-23 149.9 15.3 104 95-199 69-189 (360)
22 PRK10349 carboxylesterase BioH 99.8 1.7E-18 3.6E-23 144.0 12.9 99 94-200 12-110 (256)
23 PLN02578 hydrolase 99.8 5E-18 1.1E-22 148.2 15.7 113 83-199 75-187 (354)
24 TIGR03695 menH_SHCHC 2-succiny 99.8 3.8E-18 8.2E-23 138.4 12.7 103 95-199 1-105 (251)
25 TIGR02427 protocat_pcaD 3-oxoa 99.8 3.5E-18 7.5E-23 139.0 12.4 104 94-200 12-115 (251)
26 COG2267 PldB Lysophospholipase 99.8 9.1E-18 2E-22 143.3 15.4 108 96-203 35-146 (298)
27 PLN03084 alpha/beta hydrolase 99.8 6.5E-18 1.4E-22 148.7 14.8 107 92-200 124-233 (383)
28 TIGR01250 pro_imino_pep_2 prol 99.8 1.3E-17 2.9E-22 138.6 16.0 105 94-199 24-131 (288)
29 KOG4409 Predicted hydrolase/ac 99.8 8.6E-18 1.9E-22 142.2 14.3 121 82-204 74-200 (365)
30 PRK08775 homoserine O-acetyltr 99.7 9.8E-18 2.1E-22 145.7 11.5 115 83-200 45-174 (343)
31 PLN02652 hydrolase; alpha/beta 99.7 1.2E-16 2.7E-21 141.3 18.1 106 94-200 135-246 (395)
32 TIGR03101 hydr2_PEP hydrolase, 99.7 1E-16 2.2E-21 134.4 16.4 104 95-200 25-135 (266)
33 TIGR01738 bioH putative pimelo 99.7 4E-17 8.6E-22 132.5 10.9 98 95-200 4-101 (245)
34 PLN02894 hydrolase, alpha/beta 99.7 1.8E-16 4E-21 140.7 15.8 108 92-201 102-213 (402)
35 TIGR01249 pro_imino_pep_1 prol 99.7 1.7E-16 3.6E-21 135.9 14.0 116 83-200 14-131 (306)
36 PRK14875 acetoin dehydrogenase 99.7 3.4E-16 7.5E-21 136.6 14.7 106 91-199 127-232 (371)
37 TIGR01392 homoserO_Ac_trn homo 99.7 2.1E-16 4.5E-21 137.8 11.9 107 94-201 30-164 (351)
38 PRK07581 hypothetical protein; 99.7 1E-16 2.3E-21 138.9 9.6 105 95-200 41-160 (339)
39 KOG1455 Lysophospholipase [Lip 99.7 1.9E-15 4E-20 125.9 15.8 107 95-201 54-166 (313)
40 KOG1454 Predicted hydrolase/ac 99.7 8.5E-16 1.8E-20 132.6 12.6 107 94-201 57-168 (326)
41 PRK05855 short chain dehydroge 99.7 1.3E-15 2.8E-20 140.2 13.9 115 82-197 11-129 (582)
42 PRK00175 metX homoserine O-ace 99.6 1.7E-15 3.7E-20 133.6 12.4 105 95-200 48-183 (379)
43 PRK05077 frsA fermentation/res 99.6 7E-15 1.5E-19 130.9 16.2 126 73-199 168-300 (414)
44 TIGR03100 hydr1_PEP hydrolase, 99.6 2.7E-14 5.8E-19 120.6 18.4 104 94-201 25-136 (274)
45 TIGR01607 PST-A Plasmodium sub 99.6 2.8E-15 6E-20 130.0 12.2 107 93-199 19-185 (332)
46 COG1647 Esterase/lipase [Gener 99.6 2.3E-15 4.9E-20 120.1 10.5 105 95-202 15-121 (243)
47 PLN02511 hydrolase 99.6 6E-15 1.3E-19 130.4 13.6 106 93-199 98-210 (388)
48 PLN02980 2-oxoglutarate decarb 99.6 5.9E-15 1.3E-19 149.7 14.1 104 94-199 1370-1480(1655)
49 PRK13604 luxD acyl transferase 99.6 4.6E-14 9.9E-19 119.8 15.5 103 95-200 37-142 (307)
50 PRK10985 putative hydrolase; P 99.6 9.4E-14 2E-18 120.0 16.4 105 94-200 57-169 (324)
51 PRK10566 esterase; Provisional 99.6 7.9E-14 1.7E-18 115.4 13.8 101 94-195 26-138 (249)
52 KOG2564 Predicted acetyltransf 99.6 4.2E-14 9E-19 116.4 11.1 106 92-198 71-181 (343)
53 TIGR03230 lipo_lipase lipoprot 99.5 8.1E-14 1.8E-18 123.8 13.6 108 92-200 38-155 (442)
54 PRK11071 esterase YqiA; Provis 99.5 7.8E-14 1.7E-18 111.7 11.7 89 96-200 2-94 (190)
55 PF12695 Abhydrolase_5: Alpha/ 99.5 1.3E-13 2.8E-18 104.3 12.3 93 97-198 1-94 (145)
56 cd00707 Pancreat_lipase_like P 99.5 6E-14 1.3E-18 118.6 9.7 108 92-200 33-148 (275)
57 TIGR01840 esterase_phb esteras 99.5 8.8E-13 1.9E-17 107.1 13.1 109 93-201 11-132 (212)
58 PF06342 DUF1057: Alpha/beta h 99.5 2.4E-12 5.2E-17 106.7 15.6 104 97-202 37-140 (297)
59 TIGR01836 PHA_synth_III_C poly 99.5 4E-13 8.7E-18 117.2 11.6 102 95-201 62-173 (350)
60 COG0596 MhpC Predicted hydrola 99.4 2.5E-12 5.4E-17 103.6 13.9 102 95-200 21-124 (282)
61 PLN00021 chlorophyllase 99.4 1.1E-12 2.3E-17 112.8 11.9 102 93-199 50-166 (313)
62 PF00561 Abhydrolase_1: alpha/ 99.4 8.2E-13 1.8E-17 106.7 8.7 75 123-198 1-78 (230)
63 PLN02872 triacylglycerol lipas 99.4 8.9E-13 1.9E-17 116.6 9.4 106 95-201 74-199 (395)
64 TIGR02821 fghA_ester_D S-formy 99.4 8.2E-12 1.8E-16 105.5 14.8 107 94-200 41-174 (275)
65 PRK06765 homoserine O-acetyltr 99.4 3.9E-12 8.4E-17 112.4 12.2 107 94-201 55-198 (389)
66 TIGR03502 lipase_Pla1_cef extr 99.4 5.2E-12 1.1E-16 118.8 12.6 90 95-184 449-575 (792)
67 PF12146 Hydrolase_4: Putative 99.4 5.2E-12 1.1E-16 86.7 9.0 64 95-158 16-79 (79)
68 TIGR01838 PHA_synth_I poly(R)- 99.4 8E-12 1.7E-16 113.9 12.6 113 94-207 187-310 (532)
69 KOG2382 Predicted alpha/beta h 99.3 1.4E-11 3E-16 104.2 12.1 111 93-205 50-165 (315)
70 TIGR00976 /NonD putative hydro 99.3 1.1E-11 2.4E-16 114.4 12.3 105 93-199 20-132 (550)
71 PLN02442 S-formylglutathione h 99.3 5.2E-11 1.1E-15 101.1 14.7 107 93-200 45-179 (283)
72 PF06500 DUF1100: Alpha/beta h 99.3 1.7E-11 3.7E-16 107.4 11.6 127 72-199 164-296 (411)
73 PF00975 Thioesterase: Thioest 99.3 4.3E-11 9.4E-16 97.7 11.7 103 96-201 1-106 (229)
74 PRK07868 acyl-CoA synthetase; 99.3 6.2E-11 1.4E-15 116.2 13.3 104 94-201 66-179 (994)
75 PRK11460 putative hydrolase; P 99.3 7.1E-11 1.5E-15 97.4 11.4 107 93-199 14-138 (232)
76 PF07819 PGAP1: PGAP1-like pro 99.2 4.1E-10 8.8E-15 92.5 13.6 106 94-203 3-127 (225)
77 PF10230 DUF2305: Uncharacteri 99.2 4.7E-10 1E-14 94.4 13.6 114 95-208 2-131 (266)
78 KOG2984 Predicted hydrolase [G 99.2 1.5E-11 3.2E-16 97.2 4.2 121 81-202 28-152 (277)
79 PRK10162 acetyl esterase; Prov 99.2 3.5E-10 7.6E-15 97.5 12.1 104 93-200 79-196 (318)
80 KOG4667 Predicted esterase [Li 99.2 6.6E-10 1.4E-14 88.7 12.4 112 88-201 26-141 (269)
81 KOG1552 Predicted alpha/beta h 99.1 9.9E-10 2.1E-14 90.1 13.0 102 95-199 60-163 (258)
82 PF12740 Chlorophyllase2: Chlo 99.1 9.4E-10 2E-14 91.2 10.6 107 92-199 14-131 (259)
83 COG0429 Predicted hydrolase of 99.1 2.1E-09 4.6E-14 91.1 11.7 106 93-199 73-185 (345)
84 PF02230 Abhydrolase_2: Phosph 99.0 1.7E-09 3.6E-14 88.2 9.6 112 91-202 10-143 (216)
85 COG2945 Predicted hydrolase of 99.0 4.6E-09 1E-13 82.5 11.1 105 93-198 26-136 (210)
86 PF01738 DLH: Dienelactone hyd 99.0 6.6E-09 1.4E-13 84.6 12.6 103 94-197 13-130 (218)
87 KOG2565 Predicted hydrolases o 99.0 2.5E-09 5.3E-14 91.6 9.8 98 97-195 154-260 (469)
88 KOG1838 Alpha/beta hydrolase [ 99.0 8.3E-09 1.8E-13 90.2 12.9 106 94-199 124-236 (409)
89 PF03403 PAF-AH_p_II: Platelet 99.0 1.3E-09 2.9E-14 96.0 8.0 109 93-202 98-265 (379)
90 KOG4391 Predicted alpha/beta h 99.0 3.9E-09 8.4E-14 84.5 9.8 112 88-200 71-185 (300)
91 PRK10252 entF enterobactin syn 99.0 4.1E-09 8.8E-14 105.9 12.4 104 93-200 1066-1172(1296)
92 COG1506 DAP2 Dipeptidyl aminop 99.0 7.8E-09 1.7E-13 96.8 13.1 125 72-198 364-506 (620)
93 PF00326 Peptidase_S9: Prolyl 99.0 1.9E-09 4.2E-14 87.3 7.6 94 110-203 2-103 (213)
94 COG2021 MET2 Homoserine acetyl 98.9 6.7E-09 1.5E-13 89.3 10.3 128 94-223 50-205 (368)
95 COG3319 Thioesterase domains o 98.9 1.3E-08 2.9E-13 84.7 11.3 101 96-200 1-104 (257)
96 PF07224 Chlorophyllase: Chlor 98.9 6.3E-09 1.4E-13 85.5 8.9 117 84-201 33-159 (307)
97 PF06821 Ser_hydrolase: Serine 98.9 6.7E-09 1.4E-13 81.7 8.7 89 98-200 1-92 (171)
98 PF10503 Esterase_phd: Esteras 98.9 3.4E-08 7.4E-13 80.6 12.7 109 94-202 15-135 (220)
99 PLN02733 phosphatidylcholine-s 98.9 1.2E-08 2.6E-13 91.4 9.9 93 106-203 105-205 (440)
100 PF02129 Peptidase_S15: X-Pro 98.8 1.8E-08 4E-13 84.9 9.7 109 93-201 18-138 (272)
101 COG0412 Dienelactone hydrolase 98.8 7.4E-08 1.6E-12 79.7 12.8 104 96-200 28-147 (236)
102 PF05728 UPF0227: Uncharacteri 98.8 5.3E-08 1.1E-12 77.6 11.4 87 98-200 2-92 (187)
103 PF07859 Abhydrolase_3: alpha/ 98.8 1.6E-08 3.4E-13 81.5 8.3 100 98-201 1-112 (211)
104 PF01674 Lipase_2: Lipase (cla 98.8 5.5E-09 1.2E-13 85.2 4.5 102 96-198 2-122 (219)
105 COG3208 GrsT Predicted thioest 98.8 4.2E-08 9.1E-13 80.1 9.4 105 94-200 6-113 (244)
106 TIGR01839 PHA_synth_II poly(R) 98.8 2.9E-08 6.3E-13 90.4 9.4 107 95-205 215-334 (560)
107 PRK10115 protease 2; Provision 98.8 1.3E-07 2.8E-12 89.5 13.7 129 73-201 416-561 (686)
108 COG0400 Predicted esterase [Ge 98.7 5.7E-08 1.2E-12 78.6 9.0 112 92-204 15-139 (207)
109 PF03096 Ndr: Ndr family; Int 98.7 2E-07 4.4E-12 78.2 12.1 122 90-215 16-148 (283)
110 KOG2931 Differentiation-relate 98.7 4.5E-07 9.9E-12 75.7 13.6 118 94-215 45-171 (326)
111 PF05990 DUF900: Alpha/beta hy 98.7 2E-07 4.4E-12 77.0 11.6 108 93-200 16-138 (233)
112 COG3571 Predicted hydrolase of 98.7 3.2E-07 7E-12 70.3 11.6 107 97-204 16-129 (213)
113 PF00151 Lipase: Lipase; Inte 98.7 2.1E-08 4.6E-13 86.8 4.7 109 92-201 68-189 (331)
114 PF05448 AXE1: Acetyl xylan es 98.7 5.3E-07 1.1E-11 77.9 13.0 106 93-200 81-210 (320)
115 PF06028 DUF915: Alpha/beta hy 98.6 7.5E-08 1.6E-12 80.3 6.8 108 95-202 11-146 (255)
116 KOG4627 Kynurenine formamidase 98.6 9.4E-08 2E-12 76.0 6.9 113 84-199 55-172 (270)
117 PF12715 Abhydrolase_7: Abhydr 98.6 2.1E-07 4.6E-12 80.8 9.3 105 93-198 113-259 (390)
118 PF05057 DUF676: Putative seri 98.6 2.2E-07 4.7E-12 75.9 8.6 88 94-183 3-97 (217)
119 COG0657 Aes Esterase/lipase [L 98.6 4.7E-07 1E-11 77.7 11.0 106 94-203 78-195 (312)
120 COG1075 LipA Predicted acetylt 98.6 1.8E-07 4E-12 81.3 8.2 102 96-201 60-166 (336)
121 COG4188 Predicted dienelactone 98.6 1.7E-07 3.7E-12 80.9 7.7 92 94-185 70-180 (365)
122 KOG1553 Predicted alpha/beta h 98.6 2.3E-07 5E-12 79.0 7.8 101 95-199 243-345 (517)
123 KOG3847 Phospholipase A2 (plat 98.6 1.1E-07 2.4E-12 79.9 5.7 114 92-206 115-282 (399)
124 smart00824 PKS_TE Thioesterase 98.6 1.4E-06 3.1E-11 69.1 12.0 98 100-201 2-104 (212)
125 COG3545 Predicted esterase of 98.5 1.1E-06 2.4E-11 68.3 9.6 93 96-202 3-97 (181)
126 COG4757 Predicted alpha/beta h 98.5 7.3E-07 1.6E-11 72.2 8.5 93 91-183 25-124 (281)
127 COG3458 Acetyl esterase (deace 98.5 4E-07 8.7E-12 75.3 6.9 123 75-199 58-210 (321)
128 COG3509 LpqC Poly(3-hydroxybut 98.5 3E-06 6.6E-11 71.0 12.1 106 94-199 60-179 (312)
129 PRK10439 enterobactin/ferric e 98.4 7.3E-06 1.6E-10 73.1 14.4 117 83-199 193-323 (411)
130 PF08538 DUF1749: Protein of u 98.4 3.1E-06 6.8E-11 71.8 10.7 107 94-204 32-153 (303)
131 KOG2624 Triglyceride lipase-ch 98.4 1.7E-06 3.6E-11 76.5 8.6 109 93-202 71-202 (403)
132 KOG1515 Arylacetamide deacetyl 98.4 2.7E-05 5.7E-10 67.5 15.5 107 94-204 89-212 (336)
133 PF00756 Esterase: Putative es 98.3 1.4E-06 2.9E-11 72.2 7.2 107 94-200 23-151 (251)
134 TIGR01849 PHB_depoly_PhaZ poly 98.3 1.5E-05 3.3E-10 70.6 14.0 104 96-203 103-212 (406)
135 PRK05371 x-prolyl-dipeptidyl a 98.3 4.2E-06 9.1E-11 80.1 10.7 86 113-198 270-372 (767)
136 COG2936 Predicted acyl esteras 98.3 2.7E-06 6E-11 77.5 8.8 130 71-200 17-160 (563)
137 PTZ00472 serine carboxypeptida 98.3 7.4E-06 1.6E-10 74.2 10.7 109 93-202 75-219 (462)
138 COG4782 Uncharacterized protei 98.2 1.1E-05 2.3E-10 69.6 10.4 108 93-200 114-235 (377)
139 PF10340 DUF2424: Protein of u 98.2 1E-05 2.2E-10 70.7 10.1 106 94-202 121-238 (374)
140 PF12048 DUF3530: Protein of u 98.2 9.6E-05 2.1E-09 63.6 16.0 127 96-226 88-253 (310)
141 COG4814 Uncharacterized protei 98.2 1.1E-05 2.4E-10 66.3 9.4 103 97-200 47-177 (288)
142 COG4099 Predicted peptidase [G 98.2 3.8E-06 8.2E-11 70.5 6.7 103 96-200 192-305 (387)
143 cd00312 Esterase_lipase Estera 98.2 3.2E-06 6.9E-11 77.1 6.8 108 93-201 93-215 (493)
144 PF05577 Peptidase_S28: Serine 98.2 1.7E-05 3.6E-10 71.3 11.3 108 93-201 27-150 (434)
145 PF05677 DUF818: Chlamydia CHL 98.2 1E-05 2.3E-10 69.2 9.2 90 92-185 134-236 (365)
146 PRK04940 hypothetical protein; 98.2 8.2E-06 1.8E-10 64.3 7.5 87 98-201 2-94 (180)
147 PF06057 VirJ: Bacterial virul 98.2 9.9E-06 2.1E-10 64.2 7.8 98 96-199 3-107 (192)
148 COG2272 PnbA Carboxylesterase 98.1 6.9E-06 1.5E-10 73.3 7.0 126 94-221 93-240 (491)
149 PF02273 Acyl_transf_2: Acyl t 98.1 8E-05 1.7E-09 61.1 12.5 115 80-198 9-133 (294)
150 PF02450 LCAT: Lecithin:choles 98.1 2E-05 4.4E-10 69.9 8.8 86 110-204 66-165 (389)
151 KOG3975 Uncharacterized conser 98.1 0.00015 3.2E-09 59.7 12.9 108 92-199 26-147 (301)
152 PF03959 FSH1: Serine hydrolas 98.0 5.4E-05 1.2E-09 61.5 10.1 106 94-201 3-147 (212)
153 KOG2281 Dipeptidyl aminopeptid 98.0 1.9E-05 4.1E-10 72.3 7.8 105 93-197 640-760 (867)
154 KOG2112 Lysophospholipase [Lip 98.0 3E-05 6.5E-10 62.0 7.6 106 95-200 3-129 (206)
155 PLN02606 palmitoyl-protein thi 98.0 0.00013 2.8E-09 62.0 11.2 103 95-201 26-134 (306)
156 KOG2100 Dipeptidyl aminopeptid 97.9 4.8E-05 1E-09 72.8 9.7 105 94-200 525-645 (755)
157 COG3243 PhaC Poly(3-hydroxyalk 97.9 1.7E-05 3.6E-10 69.7 5.9 112 94-209 106-227 (445)
158 KOG4840 Predicted hydrolases o 97.9 4.5E-05 9.8E-10 61.6 7.4 104 95-202 36-147 (299)
159 COG3150 Predicted esterase [Ge 97.9 8.4E-05 1.8E-09 57.5 8.4 88 98-199 2-91 (191)
160 PF02089 Palm_thioest: Palmito 97.8 2.4E-05 5.3E-10 65.7 4.9 106 94-200 4-117 (279)
161 COG0627 Predicted esterase [Ge 97.8 8E-05 1.7E-09 64.1 7.8 108 95-202 54-190 (316)
162 PF00135 COesterase: Carboxyle 97.8 8.8E-05 1.9E-09 67.8 8.6 107 95-201 125-247 (535)
163 PLN02633 palmitoyl protein thi 97.8 0.00032 6.9E-09 59.7 11.1 101 95-199 25-131 (314)
164 PF09752 DUF2048: Uncharacteri 97.7 0.00044 9.5E-09 59.8 10.7 106 93-199 90-210 (348)
165 KOG3043 Predicted hydrolase re 97.7 0.0002 4.4E-09 58.0 7.8 115 84-199 28-154 (242)
166 PF03583 LIP: Secretory lipase 97.6 0.00069 1.5E-08 57.8 10.0 82 113-197 17-111 (290)
167 KOG3967 Uncharacterized conser 97.5 0.002 4.4E-08 51.9 11.6 107 94-202 100-230 (297)
168 KOG2541 Palmitoyl protein thio 97.5 0.0014 3E-08 54.6 10.3 101 96-200 24-129 (296)
169 KOG3724 Negative regulator of 97.5 0.0014 3.1E-08 61.6 11.5 104 94-201 88-222 (973)
170 PLN02517 phosphatidylcholine-s 97.5 0.00024 5.2E-09 65.2 6.4 92 110-203 157-267 (642)
171 KOG2183 Prolylcarboxypeptidase 97.4 0.0006 1.3E-08 59.9 8.0 104 96-199 81-202 (492)
172 cd00741 Lipase Lipase. Lipase 97.3 0.00084 1.8E-08 51.4 6.3 53 149-201 10-69 (153)
173 PF06259 Abhydrolase_8: Alpha/ 97.2 0.0071 1.5E-07 47.8 11.2 55 146-200 87-145 (177)
174 KOG2369 Lecithin:cholesterol a 97.2 0.00041 9E-09 61.8 4.6 86 109-200 124-226 (473)
175 PF00450 Peptidase_S10: Serine 97.2 0.0055 1.2E-07 54.4 11.8 108 93-201 38-183 (415)
176 KOG3101 Esterase D [General fu 97.2 0.00063 1.4E-08 54.7 4.7 106 95-200 44-177 (283)
177 KOG2182 Hydrolytic enzymes of 97.1 0.0038 8.3E-08 56.1 9.8 110 92-201 83-209 (514)
178 PF07082 DUF1350: Protein of u 97.1 0.0053 1.1E-07 50.7 9.9 98 97-197 19-123 (250)
179 PF11339 DUF3141: Protein of u 97.0 0.0072 1.6E-07 54.8 10.6 80 114-200 93-176 (581)
180 PF08840 BAAT_C: BAAT / Acyl-C 97.0 0.0024 5.3E-08 51.9 7.0 53 149-202 5-59 (213)
181 PF01764 Lipase_3: Lipase (cla 96.9 0.0021 4.5E-08 48.1 5.7 36 148-184 49-84 (140)
182 PF11187 DUF2974: Protein of u 96.8 0.0054 1.2E-07 50.4 7.3 50 151-202 73-126 (224)
183 KOG2551 Phospholipase/carboxyh 96.8 0.022 4.7E-07 46.3 10.3 104 94-201 4-149 (230)
184 COG3946 VirJ Type IV secretory 96.7 0.0063 1.4E-07 53.5 7.2 86 95-186 260-348 (456)
185 cd00519 Lipase_3 Lipase (class 96.7 0.013 2.8E-07 48.0 8.8 22 163-184 127-148 (229)
186 PF04301 DUF452: Protein of un 96.6 0.0086 1.9E-07 48.6 7.2 84 93-202 9-93 (213)
187 COG2819 Predicted hydrolase of 96.5 0.0047 1E-07 51.5 4.8 59 152-210 123-183 (264)
188 COG1770 PtrB Protease II [Amin 96.4 0.016 3.5E-07 53.8 8.4 110 92-201 445-564 (682)
189 KOG1516 Carboxylesterase and r 96.4 0.01 2.3E-07 54.8 7.3 106 95-200 112-233 (545)
190 KOG2237 Predicted serine prote 96.4 0.0054 1.2E-07 56.7 5.0 126 75-200 443-585 (712)
191 PLN02209 serine carboxypeptida 96.3 0.052 1.1E-06 49.0 10.9 108 94-201 67-214 (437)
192 PF11288 DUF3089: Protein of u 96.2 0.012 2.6E-07 47.5 5.8 68 117-185 41-116 (207)
193 PLN03016 sinapoylglucose-malat 96.2 0.18 3.9E-06 45.5 13.8 109 94-202 65-213 (433)
194 KOG1202 Animal-type fatty acid 95.9 0.048 1E-06 54.1 8.9 98 92-199 2120-2219(2376)
195 PLN00413 triacylglycerol lipas 95.8 0.036 7.8E-07 50.0 7.3 52 148-200 269-328 (479)
196 PLN02162 triacylglycerol lipas 95.7 0.037 8E-07 49.9 7.2 50 150-200 265-322 (475)
197 COG2382 Fes Enterochelin ester 95.7 0.025 5.4E-07 48.0 5.6 107 95-201 98-214 (299)
198 COG2939 Carboxypeptidase C (ca 95.7 0.05 1.1E-06 49.2 7.8 110 94-203 100-240 (498)
199 PLN02454 triacylglycerol lipas 95.4 0.038 8.2E-07 49.2 6.1 35 150-184 213-248 (414)
200 KOG4388 Hormone-sensitive lipa 95.3 0.078 1.7E-06 48.9 7.7 108 95-209 396-519 (880)
201 PLN02408 phospholipase A1 95.3 0.044 9.6E-07 48.1 6.1 37 148-184 183-220 (365)
202 PLN02571 triacylglycerol lipas 95.2 0.035 7.6E-07 49.4 5.2 38 147-184 208-246 (413)
203 PLN02310 triacylglycerol lipas 95.2 0.069 1.5E-06 47.5 7.0 37 147-183 189-228 (405)
204 PF01083 Cutinase: Cutinase; 95.2 0.068 1.5E-06 42.2 6.4 78 123-203 40-126 (179)
205 PLN02802 triacylglycerol lipas 94.9 0.065 1.4E-06 48.7 6.2 37 148-184 313-350 (509)
206 PLN03037 lipase class 3 family 94.8 0.062 1.3E-06 49.0 5.7 37 147-183 298-337 (525)
207 KOG4372 Predicted alpha/beta h 94.6 0.061 1.3E-06 47.4 5.0 88 93-182 78-168 (405)
208 PLN02324 triacylglycerol lipas 94.5 0.061 1.3E-06 47.9 4.9 36 148-183 198-234 (415)
209 PLN02213 sinapoylglucose-malat 94.5 0.18 3.9E-06 43.6 7.7 80 123-202 2-99 (319)
210 PLN02934 triacylglycerol lipas 94.4 0.074 1.6E-06 48.4 5.1 35 148-183 306-340 (515)
211 PF05277 DUF726: Protein of un 94.3 0.14 3E-06 44.7 6.5 40 163-202 219-263 (345)
212 PF05576 Peptidase_S37: PS-10 94.0 0.12 2.5E-06 45.9 5.5 112 86-200 54-170 (448)
213 PLN02753 triacylglycerol lipas 93.9 0.096 2.1E-06 47.9 4.9 37 147-183 291-331 (531)
214 PF05705 DUF829: Eukaryotic pr 93.9 1 2.2E-05 37.0 10.7 101 97-201 1-114 (240)
215 KOG1282 Serine carboxypeptidas 93.8 0.33 7.1E-06 44.0 8.1 127 75-202 48-216 (454)
216 PLN02761 lipase class 3 family 93.4 0.13 2.9E-06 46.9 4.9 37 147-183 272-313 (527)
217 PF11144 DUF2920: Protein of u 93.4 0.22 4.8E-06 44.2 6.1 38 164-201 184-221 (403)
218 PLN02719 triacylglycerol lipas 93.0 0.16 3.5E-06 46.3 4.8 36 148-183 278-317 (518)
219 KOG4540 Putative lipase essent 92.9 0.21 4.6E-06 42.3 4.9 46 150-197 262-307 (425)
220 COG5153 CVT17 Putative lipase 92.9 0.21 4.6E-06 42.3 4.9 46 150-197 262-307 (425)
221 KOG4569 Predicted lipase [Lipi 92.8 0.19 4E-06 43.9 4.9 37 147-184 155-191 (336)
222 KOG3253 Predicted alpha/beta h 92.7 0.3 6.4E-06 45.4 6.0 101 95-202 176-289 (784)
223 COG4947 Uncharacterized protei 92.5 0.44 9.5E-06 37.4 6.0 44 155-199 93-136 (227)
224 PF08237 PE-PPE: PE-PPE domain 91.9 1.6 3.5E-05 35.8 9.0 83 122-204 2-94 (225)
225 PF09949 DUF2183: Uncharacteri 91.9 3 6.4E-05 29.7 9.3 88 106-194 7-97 (100)
226 PLN02847 triacylglycerol lipas 91.8 0.33 7.3E-06 45.1 5.3 22 163-184 250-271 (633)
227 PF07519 Tannase: Tannase and 91.6 1 2.2E-05 41.2 8.2 37 164-200 115-151 (474)
228 KOG2029 Uncharacterized conser 91.2 0.55 1.2E-05 43.5 6.0 57 144-200 504-573 (697)
229 TIGR03712 acc_sec_asp2 accesso 89.3 2.8 6.2E-05 38.1 8.8 110 83-198 275-389 (511)
230 PF06441 EHN: Epoxide hydrolas 87.9 0.73 1.6E-05 33.5 3.5 33 83-115 77-112 (112)
231 PF04083 Abhydro_lipase: Parti 87.8 0.42 9.1E-06 31.0 2.0 18 94-111 42-59 (63)
232 COG1448 TyrB Aspartate/tyrosin 86.0 5.9 0.00013 35.0 8.6 86 96-198 172-264 (396)
233 COG2240 PdxK Pyridoxal/pyridox 85.3 4.1 9E-05 34.5 7.1 96 101-204 11-118 (281)
234 PF06792 UPF0261: Uncharacteri 84.6 12 0.00025 33.5 9.9 99 96-194 2-125 (403)
235 KOG1283 Serine carboxypeptidas 84.6 2.4 5.3E-05 36.6 5.4 105 94-200 30-167 (414)
236 COG1505 Serine proteases of th 84.0 1.9 4E-05 40.3 4.8 106 94-199 420-535 (648)
237 PRK02399 hypothetical protein; 83.2 18 0.0004 32.3 10.5 99 96-194 4-127 (406)
238 COG2830 Uncharacterized protei 82.9 5.5 0.00012 31.1 6.3 81 96-201 12-92 (214)
239 PRK12467 peptide synthase; Pro 81.6 18 0.00039 41.9 12.1 99 96-198 3693-3794(3956)
240 PF09994 DUF2235: Uncharacteri 80.5 16 0.00034 30.9 9.0 89 96-184 2-112 (277)
241 cd01714 ETF_beta The electron 78.5 12 0.00027 29.9 7.4 72 114-195 68-145 (202)
242 COG0529 CysC Adenylylsulfate k 77.7 26 0.00057 27.9 8.6 38 93-130 20-59 (197)
243 COG4553 DepA Poly-beta-hydroxy 77.4 29 0.00063 29.9 9.3 104 95-202 103-212 (415)
244 KOG2521 Uncharacterized conser 77.2 21 0.00046 31.4 8.8 107 94-200 37-153 (350)
245 KOG2385 Uncharacterized conser 76.0 4.5 9.8E-05 37.1 4.5 54 151-204 433-492 (633)
246 KOG2872 Uroporphyrinogen decar 75.5 12 0.00026 32.0 6.5 72 95-173 252-337 (359)
247 PF06309 Torsin: Torsin; Inte 75.1 23 0.0005 26.4 7.4 62 92-159 49-115 (127)
248 PF03610 EIIA-man: PTS system 72.2 33 0.00072 24.6 8.3 75 97-183 2-77 (116)
249 COG1073 Hydrolases of the alph 71.8 5.2 0.00011 32.8 3.8 37 94-130 48-84 (299)
250 COG3673 Uncharacterized conser 68.5 51 0.0011 28.8 8.9 92 93-184 29-142 (423)
251 PF00326 Peptidase_S9: Prolyl 67.4 14 0.0003 29.3 5.3 63 94-159 143-208 (213)
252 cd00006 PTS_IIA_man PTS_IIA, P 66.5 47 0.001 24.1 8.3 72 97-180 3-74 (122)
253 PF03283 PAE: Pectinacetyleste 65.4 19 0.00041 31.8 6.0 43 155-197 146-193 (361)
254 smart00827 PKS_AT Acyl transfe 65.1 8.5 0.00018 32.4 3.8 31 152-183 71-101 (298)
255 KOG1551 Uncharacterized conser 64.6 9.5 0.00021 32.3 3.7 103 94-197 112-228 (371)
256 TIGR03131 malonate_mdcH malona 61.9 11 0.00024 31.8 3.8 31 152-183 65-95 (295)
257 PF00698 Acyl_transf_1: Acyl t 61.3 5.7 0.00012 34.0 2.0 31 152-183 73-103 (318)
258 COG3727 Vsr DNA G:T-mismatch r 60.6 18 0.00039 27.1 4.2 36 94-129 56-115 (150)
259 COG1506 DAP2 Dipeptidyl aminop 60.3 35 0.00077 32.3 7.3 64 93-159 549-615 (620)
260 TIGR03709 PPK2_rel_1 polyphosp 59.8 26 0.00057 29.5 5.6 70 95-176 55-126 (264)
261 TIGR00128 fabD malonyl CoA-acy 58.3 12 0.00027 31.2 3.6 30 153-183 72-102 (290)
262 TIGR02764 spore_ybaN_pdaB poly 54.8 12 0.00026 29.4 2.8 33 97-129 153-188 (191)
263 TIGR03707 PPK2_P_aer polyphosp 54.8 42 0.00091 27.6 6.0 71 95-177 30-102 (230)
264 TIGR02873 spore_ylxY probable 53.3 19 0.00041 30.3 3.8 33 97-129 232-264 (268)
265 COG3933 Transcriptional antite 52.9 1.2E+02 0.0026 27.7 8.8 70 96-178 110-179 (470)
266 TIGR03586 PseI pseudaminic aci 52.5 1E+02 0.0022 26.9 8.2 81 94-184 133-214 (327)
267 PF05724 TPMT: Thiopurine S-me 52.0 17 0.00036 29.6 3.2 31 96-131 38-68 (218)
268 PRK08762 molybdopterin biosynt 51.5 1.3E+02 0.0028 26.6 8.9 33 164-199 136-169 (376)
269 TIGR02884 spore_pdaA delta-lac 50.2 22 0.00047 28.9 3.6 34 96-129 187-221 (224)
270 PRK14974 cell division protein 48.3 1.8E+02 0.0039 25.4 9.1 71 117-197 217-289 (336)
271 COG3340 PepE Peptidase E [Amin 47.3 58 0.0013 26.6 5.5 37 95-131 32-71 (224)
272 PF01583 APS_kinase: Adenylyls 46.9 71 0.0015 24.6 5.8 35 95-129 1-37 (156)
273 cd03818 GT1_ExpC_like This fam 46.7 1.7E+02 0.0036 25.6 9.0 35 98-134 2-36 (396)
274 PRK06731 flhF flagellar biosyn 46.3 1.8E+02 0.0039 24.5 9.6 72 115-195 146-219 (270)
275 TIGR00632 vsr DNA mismatch end 46.3 40 0.00087 24.7 4.1 35 94-128 55-113 (117)
276 PF10081 Abhydrolase_9: Alpha/ 46.2 38 0.00082 28.9 4.4 52 148-199 91-147 (289)
277 PF11144 DUF2920: Protein of u 46.2 71 0.0015 28.7 6.3 38 96-134 36-77 (403)
278 cd04951 GT1_WbdM_like This fam 44.9 1.8E+02 0.004 24.2 10.0 35 98-132 3-39 (360)
279 PF02230 Abhydrolase_2: Phosph 44.9 63 0.0014 25.7 5.6 57 95-159 155-214 (216)
280 PRK13256 thiopurine S-methyltr 44.3 28 0.0006 28.6 3.4 29 98-131 46-74 (226)
281 PRK05579 bifunctional phosphop 44.0 2.4E+02 0.0052 25.3 10.2 74 95-171 116-196 (399)
282 TIGR00521 coaBC_dfp phosphopan 43.7 2.4E+02 0.0052 25.2 9.7 73 96-171 113-193 (390)
283 PF13439 Glyco_transf_4: Glyco 42.3 99 0.0021 22.7 6.1 27 105-131 12-38 (177)
284 TIGR02069 cyanophycinase cyano 42.1 1.6E+02 0.0034 24.5 7.6 40 92-131 25-66 (250)
285 PF14488 DUF4434: Domain of un 42.1 1.1E+02 0.0023 23.8 6.2 59 105-163 16-80 (166)
286 PRK09936 hypothetical protein; 41.6 1.1E+02 0.0023 26.3 6.4 31 107-137 36-66 (296)
287 KOG2805 tRNA (5-methylaminomet 41.0 1.1E+02 0.0024 26.6 6.4 63 95-162 6-68 (377)
288 KOG1411 Aspartate aminotransfe 40.7 1.5E+02 0.0033 26.2 7.3 84 97-196 199-289 (427)
289 TIGR03569 NeuB_NnaB N-acetylne 40.4 1.6E+02 0.0036 25.6 7.7 81 94-185 132-216 (329)
290 cd07225 Pat_PNPLA6_PNPLA7 Pata 40.2 46 0.00099 28.6 4.2 61 110-184 3-63 (306)
291 PF00448 SRP54: SRP54-type pro 39.2 1.9E+02 0.0042 22.9 8.3 76 110-195 71-148 (196)
292 cd07198 Patatin Patatin-like p 39.1 54 0.0012 25.2 4.2 33 152-185 15-47 (172)
293 TIGR02816 pfaB_fam PfaB family 38.8 37 0.0008 31.7 3.6 32 153-185 254-286 (538)
294 PRK05282 (alpha)-aspartyl dipe 38.7 1.7E+02 0.0037 24.1 7.2 87 94-181 30-129 (233)
295 PF10686 DUF2493: Protein of u 38.6 73 0.0016 21.0 4.1 32 95-128 31-63 (71)
296 PRK00726 murG undecaprenyldiph 38.2 2.5E+02 0.0055 23.9 9.3 36 97-132 4-39 (357)
297 cd03016 PRX_1cys Peroxiredoxin 38.0 2E+02 0.0044 22.8 8.0 35 95-129 26-66 (203)
298 PF14253 AbiH: Bacteriophage a 38.0 32 0.00069 28.5 2.9 26 155-180 226-251 (270)
299 PF08484 Methyltransf_14: C-me 37.9 68 0.0015 24.7 4.5 51 147-197 51-102 (160)
300 cd07207 Pat_ExoU_VipD_like Exo 37.7 57 0.0012 25.4 4.2 32 153-185 17-48 (194)
301 PRK10279 hypothetical protein; 37.1 53 0.0012 28.2 4.1 33 152-185 22-54 (300)
302 PRK11168 glpC sn-glycerol-3-ph 37.0 1.6E+02 0.0034 25.9 7.3 42 95-136 161-205 (396)
303 TIGR01425 SRP54_euk signal rec 36.1 3.4E+02 0.0073 24.7 9.6 70 115-194 175-246 (429)
304 COG1752 RssA Predicted esteras 35.9 55 0.0012 27.9 4.1 31 153-184 29-59 (306)
305 PF04084 ORC2: Origin recognit 35.4 3E+02 0.0065 23.9 10.1 35 143-177 116-150 (326)
306 PF03976 PPK2: Polyphosphate k 35.3 29 0.00063 28.5 2.1 69 95-176 30-101 (228)
307 PRK13255 thiopurine S-methyltr 35.2 54 0.0012 26.6 3.7 28 99-131 41-68 (218)
308 COG0331 FabD (acyl-carrier-pro 34.9 69 0.0015 27.7 4.5 32 152-183 72-104 (310)
309 TIGR02260 benz_CoA_red_B benzo 34.6 3.4E+02 0.0075 24.4 9.3 38 95-133 266-303 (413)
310 TIGR03708 poly_P_AMP_trns poly 34.6 1.3E+02 0.0029 27.8 6.4 72 94-177 38-111 (493)
311 PHA02114 hypothetical protein 34.5 56 0.0012 23.2 3.1 34 96-129 83-116 (127)
312 COG0218 Predicted GTPase [Gene 34.4 56 0.0012 26.3 3.6 26 96-121 72-104 (200)
313 cd05312 NAD_bind_1_malic_enz N 34.2 1.9E+02 0.0041 24.7 6.8 77 98-178 27-120 (279)
314 TIGR03379 glycerol3P_GlpC glyc 33.8 2.4E+02 0.0052 24.9 7.9 40 96-135 162-205 (397)
315 KOG0781 Signal recognition par 33.7 1.8E+02 0.0039 27.0 6.9 86 100-195 443-538 (587)
316 PRK11460 putative hydrolase; P 33.7 2.3E+02 0.0049 22.9 7.2 42 94-135 147-191 (232)
317 PF03853 YjeF_N: YjeF-related 33.6 64 0.0014 24.9 3.8 35 94-128 24-58 (169)
318 TIGR03840 TMPT_Se_Te thiopurin 33.2 56 0.0012 26.4 3.5 18 114-131 48-65 (213)
319 cd07227 Pat_Fungal_NTE1 Fungal 33.1 70 0.0015 27.0 4.2 32 152-184 27-58 (269)
320 cd07210 Pat_hypo_W_succinogene 32.4 85 0.0018 25.4 4.5 31 154-185 19-49 (221)
321 TIGR01019 sucCoAalpha succinyl 32.2 3.2E+02 0.0069 23.3 8.0 89 96-198 90-179 (286)
322 PRK14457 ribosomal RNA large s 32.1 3.5E+02 0.0076 23.7 9.0 72 98-176 260-331 (345)
323 PRK13397 3-deoxy-7-phosphohept 32.1 3E+02 0.0066 23.0 8.2 41 93-133 120-160 (250)
324 TIGR00824 EIIA-man PTS system, 32.1 1.9E+02 0.0042 20.7 7.9 72 97-180 4-75 (116)
325 COG1087 GalE UDP-glucose 4-epi 31.8 1.9E+02 0.0041 25.1 6.5 82 114-198 16-119 (329)
326 COG1092 Predicted SAM-dependen 31.3 1.6E+02 0.0034 26.5 6.2 60 114-176 280-341 (393)
327 COG0541 Ffh Signal recognition 31.0 3.2E+02 0.0069 25.0 8.0 70 116-195 176-247 (451)
328 cd07228 Pat_NTE_like_bacteria 30.3 87 0.0019 24.1 4.1 29 156-185 21-49 (175)
329 COG5441 Uncharacterized conser 29.8 3.8E+02 0.0081 23.4 8.7 98 97-194 3-123 (401)
330 cd07209 Pat_hypo_Ecoli_Z1214_l 29.7 87 0.0019 25.2 4.1 33 153-186 16-48 (215)
331 TIGR03708 poly_P_AMP_trns poly 29.2 1.5E+02 0.0032 27.5 5.8 71 93-175 296-368 (493)
332 PRK06259 succinate dehydrogena 28.9 2.4E+02 0.0051 25.8 7.2 69 95-163 260-332 (486)
333 KOG1209 1-Acyl dihydroxyaceton 28.7 91 0.002 25.8 3.9 36 94-130 5-40 (289)
334 PF13207 AAA_17: AAA domain; P 28.7 91 0.002 21.9 3.7 61 98-160 1-64 (121)
335 PF01075 Glyco_transf_9: Glyco 28.6 83 0.0018 25.4 3.9 37 93-129 103-144 (247)
336 COG0482 TrmU Predicted tRNA(5- 28.6 1.5E+02 0.0033 26.2 5.5 61 95-162 4-64 (356)
337 COG0337 AroB 3-dehydroquinate 28.0 3.5E+02 0.0076 24.0 7.6 67 97-171 35-101 (360)
338 PRK13398 3-deoxy-7-phosphohept 27.7 3.7E+02 0.008 22.6 10.6 96 94-198 133-234 (266)
339 PRK06029 3-octaprenyl-4-hydrox 27.6 3.1E+02 0.0067 21.7 7.1 45 112-163 132-177 (185)
340 cd03811 GT1_WabH_like This fam 27.6 3.3E+02 0.0072 22.0 11.7 37 97-133 2-40 (353)
341 TIGR01285 nifN nitrogenase mol 27.5 1.9E+02 0.0042 26.1 6.3 67 112-181 324-390 (432)
342 PF01012 ETF: Electron transfe 27.2 2.7E+02 0.0059 20.9 6.8 61 114-184 50-112 (164)
343 PF01656 CbiA: CobQ/CobB/MinD/ 26.8 92 0.002 23.8 3.7 20 112-131 17-36 (195)
344 cd07205 Pat_PNPLA6_PNPLA7_NTE1 26.8 1.2E+02 0.0027 23.1 4.4 30 154-184 19-48 (175)
345 PF03205 MobB: Molybdopterin g 26.7 90 0.0019 23.3 3.4 41 97-137 1-43 (140)
346 PRK06490 glutamine amidotransf 26.3 3.7E+02 0.0079 22.1 7.3 84 95-182 8-103 (239)
347 PF06792 UPF0261: Uncharacteri 25.7 1.6E+02 0.0034 26.5 5.2 42 94-135 183-224 (403)
348 PRK11613 folP dihydropteroate 25.5 4.2E+02 0.0092 22.5 8.0 25 111-136 165-191 (282)
349 cd01520 RHOD_YbbB Member of th 25.4 1.3E+02 0.0027 21.8 4.0 33 93-129 85-118 (128)
350 PF11713 Peptidase_C80: Peptid 25.2 35 0.00077 26.3 1.0 49 128-176 59-116 (157)
351 COG0159 TrpA Tryptophan syntha 24.9 3.9E+02 0.0086 22.5 7.2 58 109-182 109-167 (265)
352 PRK02399 hypothetical protein; 24.8 1.8E+02 0.004 26.1 5.4 42 95-136 185-226 (406)
353 cd08185 Fe-ADH1 Iron-containin 24.4 3.9E+02 0.0084 23.5 7.5 64 96-170 26-91 (380)
354 COG0859 RfaF ADP-heptose:LPS h 24.4 1.5E+02 0.0033 25.5 4.9 36 95-130 175-216 (334)
355 TIGR02717 AcCoA-syn-alpha acet 24.3 5E+02 0.011 23.5 8.4 37 97-133 92-132 (447)
356 TIGR03249 KdgD 5-dehydro-4-deo 24.2 4.4E+02 0.0095 22.2 11.1 89 107-202 24-113 (296)
357 PF00484 Pro_CA: Carbonic anhy 24.1 1.2E+02 0.0025 22.8 3.7 32 146-178 38-69 (153)
358 PF14606 Lipase_GDSL_3: GDSL-l 24.0 2E+02 0.0044 22.7 5.0 62 103-171 40-101 (178)
359 cd01523 RHOD_Lact_B Member of 23.9 1.4E+02 0.003 20.3 3.8 30 93-126 60-89 (100)
360 PF08433 KTI12: Chromatin asso 23.6 2E+02 0.0044 24.2 5.3 38 97-134 2-41 (270)
361 CHL00194 ycf39 Ycf39; Provisio 23.4 2.3E+02 0.0051 23.9 5.8 31 99-131 3-33 (317)
362 PF10561 UPF0565: Uncharacteri 23.3 1.7E+02 0.0037 25.3 4.8 37 164-200 193-245 (303)
363 PRK10964 ADP-heptose:LPS hepto 23.2 1.7E+02 0.0038 24.8 5.0 35 94-128 177-216 (322)
364 TIGR03607 patatin-related prot 23.1 2.7E+02 0.0059 27.3 6.6 35 148-183 48-85 (739)
365 PRK14581 hmsF outer membrane N 23.0 1.1E+02 0.0023 29.6 3.9 78 94-171 47-142 (672)
366 KOG2170 ATPase of the AAA+ sup 22.9 1.3E+02 0.0028 26.1 4.0 33 91-123 105-139 (344)
367 PLN02695 GDP-D-mannose-3',5'-e 22.8 2.6E+02 0.0057 24.3 6.2 20 113-132 36-55 (370)
368 cd00401 AdoHcyase S-adenosyl-L 22.4 5E+02 0.011 23.4 7.8 67 112-194 75-141 (413)
369 KOG4389 Acetylcholinesterase/B 22.3 1.4E+02 0.0031 27.7 4.3 103 95-199 135-255 (601)
370 PRK05571 ribose-5-phosphate is 22.2 3.6E+02 0.0078 20.6 7.4 75 112-197 16-90 (148)
371 TIGR00689 rpiB_lacA_lacB sugar 22.2 3.6E+02 0.0077 20.5 7.5 73 112-196 14-86 (144)
372 PLN00125 Succinyl-CoA ligase [ 22.2 5.1E+02 0.011 22.3 8.0 88 97-198 97-186 (300)
373 PF13728 TraF: F plasmid trans 22.0 2.9E+02 0.0062 22.4 5.7 42 96-137 123-165 (215)
374 KOG1502 Flavonol reductase/cin 21.9 1.2E+02 0.0026 26.5 3.6 31 96-128 6-36 (327)
375 PF08386 Abhydrolase_4: TAP-li 21.8 2.3E+02 0.0051 19.7 4.7 42 95-136 34-76 (103)
376 PF09419 PGP_phosphatase: Mito 21.7 3.4E+02 0.0074 21.1 5.9 54 117-174 35-88 (168)
377 cd01423 MGS_CPS_I_III Methylgl 21.5 1.7E+02 0.0037 20.8 4.0 29 100-128 4-32 (116)
378 PRK11889 flhF flagellar biosyn 21.4 6.3E+02 0.014 23.0 9.4 77 109-195 306-385 (436)
379 PLN02752 [acyl-carrier protein 21.4 70 0.0015 27.7 2.2 18 166-183 126-143 (343)
380 COG1485 Predicted ATPase [Gene 21.4 2E+02 0.0043 25.5 4.9 47 114-173 123-169 (367)
381 PF03681 UPF0150: Uncharacteri 21.4 96 0.0021 18.2 2.2 32 121-158 12-43 (48)
382 PRK13753 dihydropteroate synth 21.1 3.9E+02 0.0084 22.7 6.5 59 114-178 156-216 (279)
383 PF02502 LacAB_rpiB: Ribose/Ga 20.8 3.7E+02 0.0081 20.2 6.4 73 112-197 15-88 (140)
384 COG1255 Uncharacterized protei 20.7 1.1E+02 0.0024 22.5 2.7 22 110-131 24-45 (129)
385 PRK14194 bifunctional 5,10-met 20.6 1.7E+02 0.0037 25.2 4.3 35 150-184 143-182 (301)
386 KOG1202 Animal-type fatty acid 20.6 1.4E+02 0.003 31.3 4.1 28 148-176 567-594 (2376)
387 PF10813 DUF2733: Protein of u 20.5 49 0.0011 18.3 0.7 12 1-12 1-12 (32)
388 TIGR02193 heptsyl_trn_I lipopo 20.5 2.2E+02 0.0047 24.0 5.1 35 94-128 178-217 (319)
389 PRK07933 thymidylate kinase; V 20.3 2.5E+02 0.0055 22.5 5.1 39 98-136 2-42 (213)
390 cd07230 Pat_TGL4-5_like Triacy 20.3 1.1E+02 0.0024 27.7 3.2 22 167-188 104-125 (421)
391 cd07025 Peptidase_S66 LD-Carbo 20.3 5.2E+02 0.011 21.7 7.2 57 99-159 3-60 (282)
392 PRK08622 galactose-6-phosphate 20.3 4.3E+02 0.0094 20.7 7.4 72 112-196 16-88 (171)
393 COG2326 Uncharacterized conser 20.3 3.1E+02 0.0067 23.2 5.5 70 92-173 70-141 (270)
394 PRK03620 5-dehydro-4-deoxygluc 20.2 5.4E+02 0.012 21.8 10.9 87 107-200 26-113 (303)
395 PLN03050 pyridoxine (pyridoxam 20.1 2.1E+02 0.0045 23.7 4.7 33 97-129 62-94 (246)
396 TIGR00959 ffh signal recogniti 20.1 6.6E+02 0.014 22.8 9.9 21 114-134 174-194 (428)
397 COG4822 CbiK Cobalamin biosynt 20.1 5.1E+02 0.011 21.4 8.0 59 95-168 138-198 (265)
398 TIGR01119 lacB galactose-6-pho 20.1 4.4E+02 0.0095 20.7 7.5 72 112-196 16-88 (171)
399 cd00951 KDGDH 5-dehydro-4-deox 20.1 5.3E+02 0.012 21.7 10.7 88 107-201 19-107 (289)
No 1
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.87 E-value=4.2e-21 Score=162.00 Aligned_cols=124 Identities=51% Similarity=0.849 Sum_probs=104.5
Q ss_pred CCeeeEEeecCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Q 026967 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (230)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (230)
++..+++....+++|+|||+||++.+.+.|..++..|.+.||+|+++|+||||.|........+++++++++.++++++.
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC
Confidence 34445544445667899999999999999999999999889999999999999875444445799999999999999986
Q ss_pred CCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCCC
Q 026967 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQR 205 (230)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~ 205 (230)
..++++|+||||||.+++.++..+|++|+++|++++.+...+.+
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~ 128 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQ 128 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCC
Confidence 43599999999999999999999999999999998876654433
No 2
>PLN02965 Probable pheophorbidase
Probab=99.87 E-value=4e-21 Score=160.07 Aligned_cols=105 Identities=49% Similarity=0.894 Sum_probs=95.0
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
.+|||+||++.+.+.|..+++.|.+.||+|+++|+||||.|..+....++++++++++.++++.+...++++++||||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 36999999999999999999999888999999999999999755445678999999999999998764499999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccccC
Q 026967 176 ACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 176 ~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
.+++.++.++|++|+++|++++...
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~ 108 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMV 108 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccC
Confidence 9999999999999999999998743
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=6.5e-21 Score=161.80 Aligned_cols=116 Identities=22% Similarity=0.294 Sum_probs=100.4
Q ss_pred CCeeeEEeecCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC------CCCCCHHHHHHHHHH
Q 026967 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT------NSVTTLAEYSKPLLD 155 (230)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~l~~ 155 (230)
++.++.+...+.++++|||+||++.+...|..+++.|.+. |+|+++|+||+|.|+.+. ...++++++++++.+
T Consensus 16 ~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~ 94 (294)
T PLN02824 16 KGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLND 94 (294)
T ss_pred cCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHH
Confidence 3455554444434589999999999999999999999987 899999999999997532 235799999999999
Q ss_pred HHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 156 YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+++++..+ +++++||||||.+++.+|.++|++|+++|++++..
T Consensus 95 ~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 95 FCSDVVGD-PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHhcCC-CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 99999886 99999999999999999999999999999999764
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=2.6e-20 Score=158.87 Aligned_cols=114 Identities=21% Similarity=0.195 Sum_probs=98.9
Q ss_pred eeEEeec-CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHhcCC
Q 026967 85 QDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 85 ~~~~~~~-~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
++++... ++.+++|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+. ...++++++++++.+++++++.
T Consensus 35 ~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~ 114 (302)
T PRK00870 35 RMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDL 114 (302)
T ss_pred EEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC
Confidence 4444432 3346899999999999999999999999889999999999999997533 2457899999999999999988
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
. +++++|||+||.+++.+|..+|++|.++|++++..
T Consensus 115 ~-~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 115 T-DVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGL 150 (302)
T ss_pred C-CEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCC
Confidence 7 99999999999999999999999999999998753
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.84 E-value=2.6e-20 Score=156.87 Aligned_cols=116 Identities=18% Similarity=0.227 Sum_probs=99.7
Q ss_pred CCeeeEEee-c-CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 82 NGKQDTNIL-E-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 82 ~~~~~~~~~-~-~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
++.++.+.. + +.++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+ ...++++++++++.+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 10 DGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTP-RHPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCC-CCcCcHHHHHHHHHHHHHH
Confidence 344454433 2 33457999999999999999999999987 499999999999999753 3457899999999999999
Q ss_pred cCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+..+ +++|+||||||.+++.+|.++|++|+++|+++++..
T Consensus 88 l~~~-~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 88 LDYG-QVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred hCcC-ceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 9877 999999999999999999999999999999998754
No 6
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=1.5e-19 Score=153.56 Aligned_cols=114 Identities=24% Similarity=0.296 Sum_probs=99.3
Q ss_pred CCeeeEEeecCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Q 026967 82 NGKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (230)
Q Consensus 82 ~~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (230)
++..+.+.... ++++|||+||++.+...|..+++.|.+. ++|+++|+||+|.|+.+ ...+++.++++++.+++++++
T Consensus 15 ~g~~i~y~~~G-~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~-~~~~~~~~~a~dl~~ll~~l~ 91 (295)
T PRK03592 15 LGSRMAYIETG-EGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKP-DIDYTFADHARYLDAWFDALG 91 (295)
T ss_pred CCEEEEEEEeC-CCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhC
Confidence 44444444333 4589999999999999999999999998 59999999999999754 345799999999999999998
Q ss_pred CCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 162 EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.+ +++++|||+||.+++.++.++|++|+++|++++..
T Consensus 92 ~~-~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 92 LD-DVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred CC-CeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 87 99999999999999999999999999999999854
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=3.3e-19 Score=156.04 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=92.9
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchh
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (230)
+++|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.+....++++++++++.++++++..+ +++|+|||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~G 165 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK-PTVLIGNSVG 165 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC-CeEEEEECHH
Confidence 48999999999999999999999987 699999999999999765445678999999999999999887 9999999999
Q ss_pred HHHHHHHHH-hCCcccceEEEecccc
Q 026967 175 GACVSYALE-HFPQKISKAIFLCATM 199 (230)
Q Consensus 175 g~~a~~~a~-~~p~~v~~vv~i~~~~ 199 (230)
|.+++.++. .+|++|+++|++++..
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEECCcc
Confidence 999998886 4799999999999764
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.82 E-value=4.2e-19 Score=149.15 Aligned_cols=114 Identities=19% Similarity=0.214 Sum_probs=90.2
Q ss_pred CeeeEEeecCCCcceEEEECCCCCChhhHHH---HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 83 GKQDTNILENIQYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 83 ~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
+..+++... +++++|||+||++.+...|.. .+..|.+.||+|+++|+||+|.|+.+.........+++++.++++.
T Consensus 19 ~~~~~y~~~-g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEA-GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEec-CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHH
Confidence 344444433 356799999999888777754 3556667789999999999999975432222222567899999999
Q ss_pred cCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 160 LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
++.+ +++++||||||.+++.++.++|++++++|++++.
T Consensus 98 l~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 98 LDIE-KAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred cCCC-CeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 9887 9999999999999999999999999999999875
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.81 E-value=3.3e-19 Score=146.30 Aligned_cols=107 Identities=19% Similarity=0.276 Sum_probs=96.3
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.+.|+|||+||++++...|..+++.|.+ ||+|+++|+||+|.|..+....+++.++++++.+++++++.. +++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-RFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC-cEEEEEec
Confidence 3467999999999999999999999986 699999999999999765556679999999999999999876 89999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
|||.+++.++..+|++++++|+++++...
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRP 117 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCC
Confidence 99999999999999999999999986543
No 10
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.81 E-value=2.4e-19 Score=143.40 Aligned_cols=101 Identities=29% Similarity=0.449 Sum_probs=92.1
Q ss_pred EEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 98 vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|..... ...+++++++++.++++++... +++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-KVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-SEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-cccccccccccc
Confidence 7999999999999999999995 699999999999999975443 4678999999999999999986 999999999999
Q ss_pred HHHHHHHhCCcccceEEEeccccC
Q 026967 177 CVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 177 ~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+++.++..+|++|+++|++++...
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSS
T ss_pred cccccccccccccccceeeccccc
Confidence 999999999999999999999874
No 11
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.81 E-value=5.9e-19 Score=148.51 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=103.2
Q ss_pred cCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 91 ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 91 ~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
+.+++|+|+++||+.....+|+.++..|+.+||+|+++|++|+|.|+.+.. ..+++...+.|+..+|++++.+ +++++
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~-k~~lv 118 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLK-KAFLV 118 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccc-eeEEE
Confidence 456789999999999999999999999999999999999999999998776 7899999999999999999977 99999
Q ss_pred EEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 170 GHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
||+||++++.++|..+|++|+++|.++.+..
T Consensus 119 gHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 119 GHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred eccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 9999999999999999999999999998876
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.81 E-value=1e-18 Score=145.84 Aligned_cols=116 Identities=18% Similarity=0.121 Sum_probs=99.6
Q ss_pred CCeeeEEeec-CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc
Q 026967 82 NGKQDTNILE-NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 82 ~~~~~~~~~~-~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (230)
++..+++... ...+++|||+||++++...|..+++.|.+ +|+|+++|+||+|.|+.+....++++++++++.++++++
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~ 92 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE 92 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc
Confidence 4444444433 33468999999999999999999999987 599999999999999765554679999999999999998
Q ss_pred CCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
... +++|+||||||.+++.++..+|++++++|++++..
T Consensus 93 ~~~-~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 93 GLS-PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred CCC-CceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 876 89999999999999999999999999999998754
No 13
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.81 E-value=5.2e-19 Score=145.42 Aligned_cols=100 Identities=22% Similarity=0.151 Sum_probs=89.2
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchh
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (230)
+|+|||+||++++...|..+++.| + +|+|+++|+||+|.|..+. ..+++++++++.++++++... +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNIL-PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCCC-CeEEEEECHH
Confidence 578999999999999999999998 3 6999999999999997533 348999999999999999876 9999999999
Q ss_pred HHHHHHHHHhCCcc-cceEEEecccc
Q 026967 175 GACVSYALEHFPQK-ISKAIFLCATM 199 (230)
Q Consensus 175 g~~a~~~a~~~p~~-v~~vv~i~~~~ 199 (230)
|.+++.+|.++|+. |+++|++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999998765 99999987664
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.81 E-value=1.6e-18 Score=145.60 Aligned_cols=107 Identities=16% Similarity=0.254 Sum_probs=90.9
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCcEEEEEE
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKVILVGH 171 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvGh 171 (230)
++.|+++||++.+...|..+++.|.+.||.|+++|+||||.|........++.++++|+.++++.+. ...+++|+||
T Consensus 25 ~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~ 104 (276)
T PHA02857 25 KALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGH 104 (276)
T ss_pred CEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEc
Confidence 4567777999999999999999999999999999999999997544445677788888888887652 2248999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
|+||.+++.+|..+|+.++++|++++....
T Consensus 105 S~GG~ia~~~a~~~p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 105 SMGATISILAAYKNPNLFTAMILMSPLVNA 134 (276)
T ss_pred CchHHHHHHHHHhCccccceEEEecccccc
Confidence 999999999999999999999999987543
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.80 E-value=1.2e-18 Score=151.67 Aligned_cols=107 Identities=16% Similarity=0.189 Sum_probs=91.7
Q ss_pred CcceEEEECCCCCChhh-HHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-----CCcEE
Q 026967 94 QYKKFVLIHGEGFGAWC-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-----DEKVI 167 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~v~ 167 (230)
.+++|||+||++.+... |..++..|.+.||+|+++|+||||.|+.......+++++++++.++++.+.. ..+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 35789999999887654 6789999999999999999999999975444446889999999999987743 23799
Q ss_pred EEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
|+||||||.+++.++..+|++++++|++++...
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 999999999999999999999999999998643
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.80 E-value=8.7e-19 Score=145.03 Aligned_cols=103 Identities=23% Similarity=0.256 Sum_probs=92.9
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.++|+|||+||++++...|..++..|.+ +|+|+++|+||+|.|..+ ...+++++++++.++++++..+ +++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~--~~~~~~~~~~d~~~~l~~l~~~-~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRD--PVMNYPAMAQDLLDTLDALQIE-KATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCC-ceEEEEEC
Confidence 4568999999999999999999999987 599999999999998743 3468999999999999999877 89999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEecccc
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
|||.+++.+|..+|++|+++|++++.+
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAP 116 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCC
Confidence 999999999999999999999997643
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=99.80 E-value=2.8e-18 Score=148.51 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=96.2
Q ss_pred CCeeeEEee-cC-CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-----CCCCHHHHHHHHH
Q 026967 82 NGKQDTNIL-EN-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-----SVTTLAEYSKPLL 154 (230)
Q Consensus 82 ~~~~~~~~~-~~-~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~l~ 154 (230)
++..+++.. ++ ..+++||++||++.+...|..++..|.+.||+|+++|+||||.|..... ...+++++++++.
T Consensus 39 ~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~ 118 (330)
T PRK10749 39 DDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLA 118 (330)
T ss_pred CCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHH
Confidence 344444333 32 3457899999999988899999999999999999999999999964321 2358899999999
Q ss_pred HHHHhc----CCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 155 DYLENL----LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 155 ~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.+++++ .. .+++++||||||.+++.++..+|+.++++|++++..
T Consensus 119 ~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 119 AFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred HHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 999876 33 499999999999999999999999999999998864
No 18
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.80 E-value=5e-18 Score=144.08 Aligned_cols=114 Identities=14% Similarity=0.167 Sum_probs=97.3
Q ss_pred CeeeEEeecCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 83 GKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 83 ~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
+.++++...+ .+++|||+||++.+...|..++..|.+ +|+|+++|+||+|.|+.+....++++++++++.+++++++.
T Consensus 23 ~~~i~y~~~G-~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (286)
T PRK03204 23 RGRIHYIDEG-TGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGL 100 (286)
T ss_pred CcEEEEEECC-CCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCC
Confidence 3444433333 458999999999888899999999987 49999999999999976544457889999999999999987
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
. +++++||||||.+++.++..+|++|+++|++++..
T Consensus 101 ~-~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 101 D-RYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred C-CEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 6 99999999999999999999999999999987754
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.79 E-value=3.6e-18 Score=153.69 Aligned_cols=117 Identities=18% Similarity=0.157 Sum_probs=96.5
Q ss_pred CeeeEEeecC-C---CcceEEEECCCCCChhhHHH-HHHHHH---HCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 026967 83 GKQDTNILEN-I---QYKKFVLIHGEGFGAWCWYK-TVASLE---EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLL 154 (230)
Q Consensus 83 ~~~~~~~~~~-~---~~~~vvliHG~~~~~~~~~~-~~~~L~---~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 154 (230)
+.++++.... . .+++|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+....++++++++++.
T Consensus 185 ~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~ 264 (481)
T PLN03087 185 NESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIE 264 (481)
T ss_pred CeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHH
Confidence 3455544432 2 24799999999999999985 456665 36899999999999999865556689999999995
Q ss_pred -HHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 155 -DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 155 -~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
.++++++.. +++++||||||.+++.+|.++|++|+++|+++++..
T Consensus 265 ~~ll~~lg~~-k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~ 310 (481)
T PLN03087 265 RSVLERYKVK-SFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYY 310 (481)
T ss_pred HHHHHHcCCC-CEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcc
Confidence 788998877 999999999999999999999999999999987643
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=2.5e-18 Score=148.43 Aligned_cols=119 Identities=20% Similarity=0.247 Sum_probs=94.8
Q ss_pred CCeeeEEe-ecC----CCcceEEEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 026967 82 NGKQDTNI-LEN----IQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLD 155 (230)
Q Consensus 82 ~~~~~~~~-~~~----~~~~~vvliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 155 (230)
++.++++. +.+ +.+++|||+||++.+. +.|..++..|.++||+|+++|+||||.|........+++++++|+.+
T Consensus 41 dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~ 120 (330)
T PLN02298 41 RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLS 120 (330)
T ss_pred CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHH
Confidence 55555542 321 2345799999997654 45667788899999999999999999997544444678889999999
Q ss_pred HHHhcCC-----CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 156 YLENLLE-----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 156 ~l~~l~~-----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+++.+.. ..+++|+||||||.+++.++..+|++|+++|+++++..
T Consensus 121 ~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 121 FFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 9988753 23799999999999999999999999999999998753
No 21
>PRK06489 hypothetical protein; Provisional
Probab=99.79 E-value=3e-18 Score=149.95 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=86.5
Q ss_pred cceEEEECCCCCChhhHH--HHHHHHH-------HCCCeEEEeCCCCCCCCCCCCCC------CCCHHHHHHHHHHHH-H
Q 026967 95 YKKFVLIHGEGFGAWCWY--KTVASLE-------EVGLIPTALDLKGSGIDLSDTNS------VTTLAEYSKPLLDYL-E 158 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~--~~~~~L~-------~~G~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~l~~~l-~ 158 (230)
+|+|||+||++++...|. .+...|. ..+|+||++|+||||.|+.+... .++++++++++.+++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999888886 5665552 34699999999999999753321 468899999888865 7
Q ss_pred hcCCCCcEE-EEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 159 NLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 159 ~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+++.+ +++ |+||||||++++.+|.++|++|+++|++++..
T Consensus 149 ~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 149 GLGVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred hcCCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 78877 774 89999999999999999999999999998754
No 22
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.79 E-value=1.7e-18 Score=144.02 Aligned_cols=99 Identities=24% Similarity=0.343 Sum_probs=84.1
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
+.|+|||+||++++...|..+++.|.+. |+|+++|+||+|.|... ..++++++++++.+ +..+ +++++||||
T Consensus 12 g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~----~~~~-~~~lvGhS~ 83 (256)
T PRK10349 12 GNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF--GALSLADMAEAVLQ----QAPD-KAIWLGWSL 83 (256)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC--CCCCHHHHHHHHHh----cCCC-CeEEEEECH
Confidence 3357999999999999999999999876 99999999999999743 24677777766553 3444 999999999
Q ss_pred hHHHHHHHHHhCCcccceEEEeccccC
Q 026967 174 GGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
||.+++.+|..+|++|+++|++++.+.
T Consensus 84 Gg~ia~~~a~~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 84 GGLVASQIALTHPERVQALVTVASSPC 110 (256)
T ss_pred HHHHHHHHHHhChHhhheEEEecCccc
Confidence 999999999999999999999987543
No 23
>PLN02578 hydrolase
Probab=99.78 E-value=5e-18 Score=148.25 Aligned_cols=113 Identities=22% Similarity=0.348 Sum_probs=97.1
Q ss_pred CeeeEEeecCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 83 GKQDTNILENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 83 ~~~~~~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
+.++.+...+ ++++|||+||++.+...|..++..|.+ +|+|+++|+||+|.|+.+ ...++...+++++.++++++..
T Consensus 75 ~~~i~Y~~~g-~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~-~~~~~~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 75 GHKIHYVVQG-EGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKA-LIEYDAMVWRDQVADFVKEVVK 151 (354)
T ss_pred CEEEEEEEcC-CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCc-ccccCHHHHHHHHHHHHHHhcc
Confidence 4444444333 457899999999999999999999987 599999999999999764 3457889999999999999887
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 163 DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+ +++++|||+||++++.+|.++|++++++|++++..
T Consensus 152 ~-~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 152 E-PAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred C-CeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 6 99999999999999999999999999999998754
No 24
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.77 E-value=3.8e-18 Score=138.38 Aligned_cols=103 Identities=23% Similarity=0.291 Sum_probs=90.8
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CCCCHHHHHHH-HHHHHHhcCCCCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKP-LLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-l~~~l~~l~~~~~v~lvGhS 172 (230)
+|+|||+||++++...|..+++.|+ .||.|+++|+||+|.|..+.. ...++.+.+++ +.++++.+..+ +++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-PFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-eEEEEEec
Confidence 3789999999999999999999998 689999999999999975432 45688888888 77777887666 99999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEecccc
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+||.+++.++.++|++|+++|++++..
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCC
Confidence 999999999999999999999998764
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.77 E-value=3.5e-18 Score=139.00 Aligned_cols=104 Identities=15% Similarity=0.270 Sum_probs=93.1
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
++|+|||+||++.+...|..+++.|.. ||+|+++|+||+|.|.. ....+++.++++++.++++.++.+ +++++|||+
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~i~~~~~~-~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDA-PEGPYSIEDLADDVLALLDHLGIE-RAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 568899999999999999999999975 79999999999999864 334568999999999999999876 999999999
Q ss_pred hHHHHHHHHHhCCcccceEEEeccccC
Q 026967 174 GGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
||.+++.+|..+|++++++|++++...
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~ 115 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAK 115 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccc
Confidence 999999999999999999999987643
No 26
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.77 E-value=9.1e-18 Score=143.28 Aligned_cols=108 Identities=27% Similarity=0.414 Sum_probs=98.5
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcC---CCCcEEEEEE
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDL-SDTNSVTTLAEYSKPLLDYLENLL---EDEKVILVGH 171 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvGh 171 (230)
.+||++||++.+...|..++..|..+||.|+++|+||||.|. .......++.++..|+..+++... ...+++++||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 689999999999999999999999999999999999999997 556667779999999999998875 3479999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccCCCC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMVSDG 203 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~ 203 (230)
||||.+++.++..++..|+++|+.+|......
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 99999999999999999999999999986654
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.77 E-value=6.5e-18 Score=148.75 Aligned_cols=107 Identities=27% Similarity=0.282 Sum_probs=96.5
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCcEEE
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEYSKPLLDYLENLLEDEKVIL 168 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (230)
+.++++|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.+.. ..+++.++++++.++++++..+ +++|
T Consensus 124 ~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~-~~~L 201 (383)
T PLN03084 124 SNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD-KVSL 201 (383)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC-CceE
Confidence 34568999999999999999999999987 69999999999999975433 2579999999999999999887 9999
Q ss_pred EEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 169 VGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+|||+||.+++.+|..+|++|.++|++++...
T Consensus 202 vG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 202 VVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred EEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 99999999999999999999999999998754
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.77 E-value=1.3e-17 Score=138.65 Aligned_cols=105 Identities=24% Similarity=0.193 Sum_probs=88.8
Q ss_pred CcceEEEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHhcCCCCcEEEEE
Q 026967 94 QYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNS--VTTLAEYSKPLLDYLENLLEDEKVILVG 170 (230)
Q Consensus 94 ~~~~vvliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (230)
.+++|||+||+.++. ..|..+...|.+.||+|+++|+||+|.|..+... ..+++++++++.+++++++.. +++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLD-KFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 367999999985554 4556666777776999999999999998754333 378999999999999999877 899999
Q ss_pred EchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 171 HSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 171 hS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
||+||.+++.++..+|++++++|++++..
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccc
Confidence 99999999999999999999999988754
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.77 E-value=8.6e-18 Score=142.18 Aligned_cols=121 Identities=26% Similarity=0.355 Sum_probs=102.2
Q ss_pred CCeeeEEee---cCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC---CCCCCHHHHHHHHHH
Q 026967 82 NGKQDTNIL---ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT---NSVTTLAEYSKPLLD 155 (230)
Q Consensus 82 ~~~~~~~~~---~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~ 155 (230)
++..++... ....++++||+||+|.+...|...++.|++ .+.|+++|++|+|.|+.+. +.......+++.+.+
T Consensus 74 ~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~ 152 (365)
T KOG4409|consen 74 NGIEIWTITVSNESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQ 152 (365)
T ss_pred CCceeEEEeecccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHH
Confidence 444455333 235678999999999999999999999999 5999999999999998543 233455678889999
Q ss_pred HHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCC
Q 026967 156 YLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~ 204 (230)
+-...+.. +.+|+|||+||+++..+|.+||++|.++|+++|+..++..
T Consensus 153 WR~~~~L~-KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 153 WRKKMGLE-KMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHcCCc-ceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 99999998 9999999999999999999999999999999999877644
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.75 E-value=9.8e-18 Score=145.75 Aligned_cols=115 Identities=16% Similarity=0.119 Sum_probs=88.7
Q ss_pred CeeeEEeecCCCcceEEEECCCCCChh------------hHHHHHH---HHHHCCCeEEEeCCCCCCCCCCCCCCCCCHH
Q 026967 83 GKQDTNILENIQYKKFVLIHGEGFGAW------------CWYKTVA---SLEEVGLIPTALDLKGSGIDLSDTNSVTTLA 147 (230)
Q Consensus 83 ~~~~~~~~~~~~~~~vvliHG~~~~~~------------~~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 147 (230)
+..+++...+.+++++||+||+..+.. .|..++. .|...+|+||++|+||+|.|. ...+++.
T Consensus 45 ~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~---~~~~~~~ 121 (343)
T PRK08775 45 DLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL---DVPIDTA 121 (343)
T ss_pred CceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC---CCCCCHH
Confidence 444554443333445777766655544 5877886 564336999999999999774 2346789
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
++++++.+++++++.++.++|+||||||++++.+|.++|++|+++|++++...
T Consensus 122 ~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 122 DQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred HHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 99999999999999873458999999999999999999999999999988653
No 31
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.74 E-value=1.2e-16 Score=141.25 Aligned_cols=106 Identities=23% Similarity=0.290 Sum_probs=89.8
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEEEEE
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVILVG 170 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvG 170 (230)
.+++|||+||++.+...|..+++.|.++||+|+++|++|||.|+.......+++.+.+|+.++++.+.. ..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 356899999999998899999999999999999999999999976544456788888999998888753 24799999
Q ss_pred EchhHHHHHHHHHhCCc---ccceEEEeccccC
Q 026967 171 HSSGGACVSYALEHFPQ---KISKAIFLCATMV 200 (230)
Q Consensus 171 hS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~~ 200 (230)
|||||.+++.++. +|+ +++++|+.+++..
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccc
Confidence 9999999998775 554 7999999988753
No 32
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.74 E-value=1e-16 Score=134.42 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=84.3
Q ss_pred cceEEEECCCCCC----hhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HhcCCCCcEE
Q 026967 95 YKKFVLIHGEGFG----AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL---ENLLEDEKVI 167 (230)
Q Consensus 95 ~~~vvliHG~~~~----~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l---~~l~~~~~v~ 167 (230)
.++|||+||++.. ...|..+++.|+++||.|+++|+||||.|..+.. ..++..+++|+..++ ++.+.. +++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~-~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHP-PVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCC-CEE
Confidence 4689999999764 3457778899999999999999999999875333 346777777766654 444444 999
Q ss_pred EEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
|+||||||.+++.++.++|++++++|++++...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999987643
No 33
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.72 E-value=4e-17 Score=132.47 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=83.6
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchh
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (230)
.++|||+||++.+...|..+++.|.+ +|+|+++|+||+|.|... ...++.++++++.+.+ . ++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~-~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----P-DPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----C-CCeEEEEEcHH
Confidence 47899999999999999999999986 599999999999998642 3457777777766543 2 49999999999
Q ss_pred HHHHHHHHHhCCcccceEEEeccccC
Q 026967 175 GACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 175 g~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
|.+++.++.++|+++.++|++++.+.
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcc
Confidence 99999999999999999999987653
No 34
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.72 E-value=1.8e-16 Score=140.70 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=89.1
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHhcCCCCcEE
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL----AEYSKPLLDYLENLLEDEKVI 167 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~----~~~~~~l~~~l~~l~~~~~v~ 167 (230)
++++|+|||+||++.+...|...+..|.+. |+|+++|++|+|.|+.+.....+. ..+++++.++++.++.. +++
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~ 179 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS-NFI 179 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC-CeE
Confidence 445689999999999998998888999875 999999999999997533221221 23566778888888776 999
Q ss_pred EEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 168 LVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
|+||||||++++.+|.++|++|+++|++++....
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 9999999999999999999999999999876543
No 35
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.71 E-value=1.7e-16 Score=135.89 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=91.3
Q ss_pred CeeeEEee-cCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhc
Q 026967 83 GKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 83 ~~~~~~~~-~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~l 160 (230)
+.++++.. +.+++++|||+||+.++...+ .+...+...+|+|+++|+||+|.|..+.. ...+..+.+.++..+++++
T Consensus 14 ~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l 92 (306)
T TIGR01249 14 NHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL 92 (306)
T ss_pred CcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc
Confidence 44454433 333467899999987665443 34445555689999999999999974332 3457889999999999999
Q ss_pred CCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 161 LEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+.. +++++||||||.+++.++..+|++|+++|+++++..
T Consensus 93 ~~~-~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 93 GIK-NWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CCC-CEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 877 899999999999999999999999999999987654
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.70 E-value=3.4e-16 Score=136.60 Aligned_cols=106 Identities=28% Similarity=0.345 Sum_probs=94.0
Q ss_pred cCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEE
Q 026967 91 ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (230)
Q Consensus 91 ~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (230)
+.+++++|||+||++++...|..++..|.+. |+|+++|+||||.|... ....++.++++++.++++.++.. +++++|
T Consensus 127 g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~lvG 203 (371)
T PRK14875 127 GEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKA-VGAGSLDELAAAVLAFLDALGIE-RAHLVG 203 (371)
T ss_pred cCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCC-CCCCCHHHHHHHHHHHHHhcCCc-cEEEEe
Confidence 3445789999999999999999999999875 99999999999998542 34568999999999999999877 899999
Q ss_pred EchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 171 HSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 171 hS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
||+||.+++.+|..+|+++.++|++++..
T Consensus 204 ~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 204 HSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred echHHHHHHHHHHhCchheeEEEEECcCC
Confidence 99999999999999999999999998763
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.69 E-value=2.1e-16 Score=137.85 Aligned_cols=107 Identities=15% Similarity=0.196 Sum_probs=87.0
Q ss_pred CcceEEEECCCCCChh-----------hHHHHH---HHHHHCCCeEEEeCCCC--CCCCCCC----C-------CCCCCH
Q 026967 94 QYKKFVLIHGEGFGAW-----------CWYKTV---ASLEEVGLIPTALDLKG--SGIDLSD----T-------NSVTTL 146 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~-----------~~~~~~---~~L~~~G~~vi~~D~~G--~G~S~~~----~-------~~~~~~ 146 (230)
++++|||+||++++.. .|..++ ..|...+|+|+++|+|| +|.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3579999999988763 366665 25545679999999999 5554321 1 124789
Q ss_pred HHHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 147 AEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
+++++++.+++++++.+ + ++|+||||||.+++.+|.++|++|+++|++++....
T Consensus 110 ~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 99999999999999887 7 999999999999999999999999999999987643
No 38
>PRK07581 hypothetical protein; Validated
Probab=99.69 E-value=1e-16 Score=138.88 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=77.4
Q ss_pred cceEEEECCCCCChhhHHHHH---HHHHHCCCeEEEeCCCCCCCCCCCCC--CCCCHHH-----HHHHHHH----HHHhc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTV---ASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAE-----YSKPLLD----YLENL 160 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~---~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~-----~~~~l~~----~l~~l 160 (230)
.|+||++||++++...|..++ ..|...+|+||++|+||||.|..+.. ..+++++ .++++.+ +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777776666665543 36765679999999999999974332 1233221 3344433 66779
Q ss_pred CCCCc-EEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 161 LEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 161 ~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+.+ + ++||||||||++++.+|.++|++|+++|++++...
T Consensus 121 gi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 121 GIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred CCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 887 8 57999999999999999999999999999987653
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.68 E-value=1.9e-15 Score=125.91 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=94.7
Q ss_pred cceEEEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-----CCcEEE
Q 026967 95 YKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-----DEKVIL 168 (230)
Q Consensus 95 ~~~vvliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~v~l 168 (230)
+..|+++||++... +.|..++..|+..||.|+++|++|||.|++-.....++...++|+..+++.... +.+.++
T Consensus 54 r~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL 133 (313)
T KOG1455|consen 54 RGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFL 133 (313)
T ss_pred ceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeee
Confidence 33799999998765 788889999999999999999999999998778888999999999999986422 368999
Q ss_pred EEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 169 VGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
+||||||.+++.++.+.|+..+++|++++...-
T Consensus 134 ~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i 166 (313)
T KOG1455|consen 134 FGESMGGAVALLIALKDPNFWDGAILVAPMCKI 166 (313)
T ss_pred eecCcchHHHHHHHhhCCcccccceeeeccccc
Confidence 999999999999999999999999999987533
No 40
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.66 E-value=8.5e-16 Score=132.62 Aligned_cols=107 Identities=27% Similarity=0.465 Sum_probs=94.8
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHC-CCeEEEeCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSG-IDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
.+++||++|||+++...|+.++..|.+. |+.|+++|++|+| .|..+....++..+++..+..+....... +++++||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-~~~lvgh 135 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-PVSLVGH 135 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc-ceEEEEe
Confidence 6789999999999999999999998876 5999999999999 45556667799999999999999999887 8999999
Q ss_pred chhHHHHHHHHHhCCcccceEE---EeccccCC
Q 026967 172 SSGGACVSYALEHFPQKISKAI---FLCATMVS 201 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv---~i~~~~~~ 201 (230)
|+||+++..+|+.+|+.|+.+| ++++....
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~ 168 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVYS 168 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeeccccccccc
Confidence 9999999999999999999999 55555443
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.66 E-value=1.3e-15 Score=140.24 Aligned_cols=115 Identities=18% Similarity=0.191 Sum_probs=90.5
Q ss_pred CCeeeEEee-cCCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHh
Q 026967 82 NGKQDTNIL-ENIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 82 ~~~~~~~~~-~~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~ 159 (230)
++..+++.. +++++|+|||+||++.+...|..+++.|. .||+|+++|+||||.|..+. ...+++.++++|+.+++++
T Consensus 11 ~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~ 89 (582)
T PRK05855 11 DGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDA 89 (582)
T ss_pred CCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 344454433 44457899999999999999999999995 57999999999999997433 3457899999999999999
Q ss_pred cCCCCcEEEEEEchhHHHHHHHHHh--CCcccceEEEecc
Q 026967 160 LLEDEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCA 197 (230)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~vv~i~~ 197 (230)
++...+++|+||||||.+++.++.. .+.++..++.+++
T Consensus 90 l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~ 129 (582)
T PRK05855 90 VSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSG 129 (582)
T ss_pred hCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccC
Confidence 9876469999999999999888765 2344444444443
No 42
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.64 E-value=1.7e-15 Score=133.56 Aligned_cols=105 Identities=14% Similarity=0.238 Sum_probs=85.3
Q ss_pred cceEEEECCCCCChhh-------------HHHHHH---HHHHCCCeEEEeCCCCC-CCCCCCC----C---------CCC
Q 026967 95 YKKFVLIHGEGFGAWC-------------WYKTVA---SLEEVGLIPTALDLKGS-GIDLSDT----N---------SVT 144 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~-G~S~~~~----~---------~~~ 144 (230)
+|+|||+||++.+... |..++. .|-..+|+||++|++|+ |.|+.+. . ..+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999998875 555552 33234799999999993 4443211 0 157
Q ss_pred CHHHHHHHHHHHHHhcCCCCc-EEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 145 TLAEYSKPLLDYLENLLEDEK-VILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 145 ~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
++.++++++.+++++++.+ + ++++||||||.+++.+|..+|++|+++|++++...
T Consensus 128 ~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 128 TIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 8999999999999999987 7 59999999999999999999999999999998754
No 43
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.64 E-value=7e-15 Score=130.94 Aligned_cols=126 Identities=13% Similarity=0.084 Sum_probs=91.5
Q ss_pred eeeeeecccCCeeeE--EeecC--CCcceEEEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHH
Q 026967 73 RRTLSESLSNGKQDT--NILEN--IQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLA 147 (230)
Q Consensus 73 ~~~~~~~~~~~~~~~--~~~~~--~~~~~vvliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 147 (230)
...+..+..++..+. ++... ++.|+||++||+++.. +.|..+++.|.++||.|+++|+||+|.|.... ......
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHH
Confidence 446666666663333 33332 3345666666666654 56888899999999999999999999986422 123444
Q ss_pred HHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 148 EYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
....++.+++..... ..+|.++|||+||++++.+|..+|++|+++|++++..
T Consensus 247 ~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~ 300 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVV 300 (414)
T ss_pred HHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCcc
Confidence 455667777766532 2599999999999999999998899999999998875
No 44
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.64 E-value=2.7e-14 Score=120.59 Aligned_cols=104 Identities=9% Similarity=0.132 Sum_probs=80.9
Q ss_pred CcceEEEECCCCC----ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC----CCCc
Q 026967 94 QYKKFVLIHGEGF----GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL----EDEK 165 (230)
Q Consensus 94 ~~~~vvliHG~~~----~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~ 165 (230)
.++.||++||+.. +...|..+++.|+++||.|+++|++|||.|.... .++.++..|+.++++.+. .-++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4567888887643 2334677889999999999999999999986432 356677777777777662 1137
Q ss_pred EEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 166 VILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
++++|||+||.+++.++.. +++|+++|+++++...
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 9999999999999999865 4689999999998654
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.63 E-value=2.8e-15 Score=129.98 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=85.1
Q ss_pred CCcceEEEECCCCCChh-hH-------------------------HHHHHHHHHCCCeEEEeCCCCCCCCCCCC---CCC
Q 026967 93 IQYKKFVLIHGEGFGAW-CW-------------------------YKTVASLEEVGLIPTALDLKGSGIDLSDT---NSV 143 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~-~~-------------------------~~~~~~L~~~G~~vi~~D~~G~G~S~~~~---~~~ 143 (230)
..+.+||++||++++.. .| ..+++.|.++||.|+++|+||||.|.... ...
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccch
Confidence 34558999999988875 21 36899999999999999999999987432 223
Q ss_pred CCHHHHHHHHHHHHHhcC----------------------C-CCcEEEEEEchhHHHHHHHHHhCCc--------ccceE
Q 026967 144 TTLAEYSKPLLDYLENLL----------------------E-DEKVILVGHSSGGACVSYALEHFPQ--------KISKA 192 (230)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~----------------------~-~~~v~lvGhS~Gg~~a~~~a~~~p~--------~v~~v 192 (230)
.++.++++|+..+++... . +.+++|+||||||.+++.++..+++ .++++
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 578999999999987642 1 3589999999999999998876542 58999
Q ss_pred EEecccc
Q 026967 193 IFLCATM 199 (230)
Q Consensus 193 v~i~~~~ 199 (230)
|++++..
T Consensus 179 i~~s~~~ 185 (332)
T TIGR01607 179 ISLSGMI 185 (332)
T ss_pred EEeccce
Confidence 9888875
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.63 E-value=2.3e-15 Score=120.11 Aligned_cols=105 Identities=23% Similarity=0.210 Sum_probs=89.1
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC--CCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS 172 (230)
+..|+|+||+.++..+.+.+.+.|.++||+|.+|.+||||.... ..-..+..+|..++.+..++|.. -..|.++|.|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e-~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE-DFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH-HHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 38999999999999999999999999999999999999997642 23345777887777777766652 1499999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
|||.+++.+|..+| ++++|.+++++...
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k 121 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVK 121 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccc
Confidence 99999999999998 99999999987643
No 47
>PLN02511 hydrolase
Probab=99.62 E-value=6e-15 Score=130.44 Aligned_cols=106 Identities=15% Similarity=0.193 Sum_probs=80.6
Q ss_pred CCcceEEEECCCCCChh-hH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEE
Q 026967 93 IQYKKFVLIHGEGFGAW-CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVI 167 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~-~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~ 167 (230)
..+|+||++||++++.. .| ..++..+.+.||+|+++|+||||.|....... ....+.+|+.++++++.. ..+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQF-YSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCE-EcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 34678999999976654 35 45777777889999999999999986432221 224556666666666543 24899
Q ss_pred EEEEchhHHHHHHHHHhCCcc--cceEEEecccc
Q 026967 168 LVGHSSGGACVSYALEHFPQK--ISKAIFLCATM 199 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~--v~~vv~i~~~~ 199 (230)
++||||||.+++.++.++|++ |.++|+++++.
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 999999999999999999987 88888887664
No 48
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.61 E-value=5.9e-15 Score=149.71 Aligned_cols=104 Identities=20% Similarity=0.264 Sum_probs=92.6
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHHhcCCCCcE
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-------NSVTTLAEYSKPLLDYLENLLEDEKV 166 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (230)
.+++|||+||++++...|..++..|.+. |+|+++|+||||.|.... ...++++++++++.++++++..+ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-KV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-CE
Confidence 3579999999999999999999999874 999999999999986432 23467899999999999999877 99
Q ss_pred EEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+|+||||||.+++.++.++|++|+++|++++.+
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 999999999999999999999999999998754
No 49
>PRK13604 luxD acyl transferase; Provisional
Probab=99.59 E-value=4.6e-14 Score=119.80 Aligned_cols=103 Identities=11% Similarity=0.058 Sum_probs=77.7
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTN--SVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~--~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
.++||++||++.....+..+++.|+++||.|+.+|++|+ |.|+.+.. ........+..+.++++.... .++.|+||
T Consensus 37 ~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~-~~I~LiG~ 115 (307)
T PRK13604 37 NNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGI-NNLGLIAA 115 (307)
T ss_pred CCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCC-CceEEEEE
Confidence 468999999999887899999999999999999999987 98865321 111122233333445544444 48999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
||||.+++.+|... .++++|+.+|+..
T Consensus 116 SmGgava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 116 SLSARIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred CHHHHHHHHHhcCC--CCCEEEEcCCccc
Confidence 99999987777643 4999999999865
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.58 E-value=9.4e-14 Score=119.95 Aligned_cols=105 Identities=15% Similarity=0.237 Sum_probs=74.3
Q ss_pred CcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHH-hcCCCCcEE
Q 026967 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSV---TTLAEYSKPLLDYLE-NLLEDEKVI 167 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~l~~~l~-~l~~~~~v~ 167 (230)
.+|+||++||++++.. .+..++..|.++||+|+++|+||+|.+....... ....| +..+.+.+. +++.. +++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D-~~~~i~~l~~~~~~~-~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETED-ARFFLRWLQREFGHV-PTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHH-HHHHHHHHHHhCCCC-CEE
Confidence 4679999999977643 3456889999999999999999999764321111 12333 233333333 34444 899
Q ss_pred EEEEchhHHHHHHHHHhCCcc--cceEEEeccccC
Q 026967 168 LVGHSSGGACVSYALEHFPQK--ISKAIFLCATMV 200 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~--v~~vv~i~~~~~ 200 (230)
++||||||.++..++..+++. +.++|+++++..
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 999999999877777666543 899999988754
No 51
>PRK10566 esterase; Provisional
Probab=99.56 E-value=7.9e-14 Score=115.36 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=71.9
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCH-------HHHHHHHHHHHHh---cC-C
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTL-------AEYSKPLLDYLEN---LL-E 162 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~l~~~l~~---l~-~ 162 (230)
..|+||++||++++...|..++..|.++||.|+++|+||+|.+..... ...+ .+..+++.++++. .. .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 357999999999998889999999999999999999999997632111 1111 1122333333333 22 2
Q ss_pred -CCcEEEEEEchhHHHHHHHHHhCCcccceEEEe
Q 026967 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIFL 195 (230)
Q Consensus 163 -~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i 195 (230)
.++++++|||+||.+++.++..+|+....++++
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCCeeEEEEee
Confidence 258999999999999999998888644344444
No 52
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.55 E-value=4.2e-14 Score=116.41 Aligned_cols=106 Identities=25% Similarity=0.348 Sum_probs=88.9
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC--CCcEEE
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVIL 168 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~l 168 (230)
...+|++++.||+|.+.-.|..++..|... -.+++++|+||||.+........+.+.+++|+.++++++.. ..+|+|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 457889999999999999999999888654 46788999999999986666778999999999999998864 358999
Q ss_pred EEEchhHHHHHHHHHh--CCcccceEEEeccc
Q 026967 169 VGHSSGGACVSYALEH--FPQKISKAIFLCAT 198 (230)
Q Consensus 169 vGhS~Gg~~a~~~a~~--~p~~v~~vv~i~~~ 198 (230)
|||||||.++.+.|.. -|. +.+++.|+--
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999877643 454 8888887654
No 53
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.55 E-value=8.1e-14 Score=123.82 Aligned_cols=108 Identities=20% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCCcceEEEECCCCCCh--hhHHH-HHHHHHH--CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----CC
Q 026967 92 NIQYKKFVLIHGEGFGA--WCWYK-TVASLEE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LE 162 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~--~~~~~-~~~~L~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~ 162 (230)
+..+|++|++||+..+. ..|.. +++.|.. ..++||++|++|+|.+..... .......++++.++++.+ +.
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a-~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS-AAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc-cccHHHHHHHHHHHHHHHHHhhCC
Confidence 34678999999997653 45764 5555542 259999999999998764322 233455666677777654 21
Q ss_pred -CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 163 -~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
-++++||||||||.++..++..+|++|.++++++|..+
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 14999999999999999999999999999999999743
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.54 E-value=7.8e-14 Score=111.66 Aligned_cols=89 Identities=17% Similarity=0.122 Sum_probs=74.6
Q ss_pred ceEEEECCCCCChhhHHH--HHHHHHHC--CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 96 KKFVLIHGEGFGAWCWYK--TVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~--~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
|+|||+||++++...|.. +.+.|.+. +|+|+++|+||++ .+.++.+.++++++..+ +++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-PLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 589999999999999974 45677653 6999999999875 35778888899888776 9999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
|+||.+++.+|..+|. ++|++++...
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 9999999999999883 4678888654
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.54 E-value=1.3e-13 Score=104.33 Aligned_cols=93 Identities=25% Similarity=0.370 Sum_probs=74.6
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HhcCCCCcEEEEEEchhH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL-ENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l-~~l~~~~~v~lvGhS~Gg 175 (230)
+|||+||++.+...|..+++.|+++||.|+.+|+|++|.+.. .+....+.+.+ .......+++++|||+||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG--------ADAVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH--------SHHHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch--------hHHHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 589999999999999999999999999999999999997621 11222333332 212233599999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccc
Q 026967 176 ACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 176 ~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
.+++.++..+ .+++++|+++++
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPY 94 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESES
T ss_pred HHHHHHhhhc-cceeEEEEecCc
Confidence 9999999987 689999999995
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.52 E-value=6e-14 Score=118.56 Aligned_cols=108 Identities=19% Similarity=0.145 Sum_probs=78.2
Q ss_pred CCCcceEEEECCCCCCh-hhHHH-HHH-HHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----CC-C
Q 026967 92 NIQYKKFVLIHGEGFGA-WCWYK-TVA-SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----LE-D 163 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~-~~~~~-~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~-~ 163 (230)
++++|++|++||+.++. ..|.. +.. .|...+|+|+++|+++++.... ...........+++..+++.+ +. .
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y-~~a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY-PQAVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh-HHHHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 45678999999998877 56764 444 3444579999999998743221 112223444455555665554 21 2
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+++++||||+||.++..++..+|++|.+++.+++..+
T Consensus 112 ~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 112 ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 4899999999999999999999999999999998754
No 57
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.48 E-value=8.8e-13 Score=107.14 Aligned_cols=109 Identities=15% Similarity=0.115 Sum_probs=76.6
Q ss_pred CCcceEEEECCCCCChhhHH---HHHHHHHHCCCeEEEeCCCCCCCCCCC-----CC----CCCCHHHHHHHHHHHHHhc
Q 026967 93 IQYKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDLKGSGIDLSD-----TN----SVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~~G~G~S~~~-----~~----~~~~~~~~~~~l~~~l~~l 160 (230)
...|+||++||++.+...|. .+...+.+.||.|++||++|++.+... .. ......+....+..+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 34689999999998887765 366677778999999999998743210 00 0111222222222222333
Q ss_pred CCC-CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 161 LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 161 ~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
..+ ++++|+|||+||.+++.++..+|+.+.+++.+++.+..
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~ 132 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYG 132 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCccc
Confidence 332 58999999999999999999999999999999887643
No 58
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.47 E-value=2.4e-12 Score=106.73 Aligned_cols=104 Identities=18% Similarity=0.188 Sum_probs=97.0
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
+||-+||.+++..+|.-+...|.+.|+++|.+++||+|.+..++...++-.+...-+.++|+.+....+++++|||.|+-
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGce 116 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCE 116 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchH
Confidence 79999999999999999999999999999999999999999888888899999999999999999988999999999999
Q ss_pred HHHHHHHhCCcccceEEEeccccCCC
Q 026967 177 CVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 177 ~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
.|+.++..+| ..++++++++....
T Consensus 117 nal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 117 NALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred HHHHHHhcCc--cceEEEecCCcccc
Confidence 9999999986 77999999986543
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.47 E-value=4e-13 Score=117.16 Aligned_cols=102 Identities=16% Similarity=0.146 Sum_probs=79.1
Q ss_pred cceEEEECCCCCChhhH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHH----hcCCCC
Q 026967 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP-LLDYLE----NLLEDE 164 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~~l~----~l~~~~ 164 (230)
+++||++||+..+...+ ..+++.|.++||+|+++|++|+|.+.. ..++.++..+ +.++++ ..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~~~- 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSKLD- 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 45799999986544443 579999999999999999999997643 2355665432 433333 33444
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
+++++||||||.+++.++..+|++|+++|+++++...
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 9999999999999999999999999999999988754
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.45 E-value=2.5e-12 Score=103.63 Aligned_cols=102 Identities=26% Similarity=0.352 Sum_probs=84.8
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.++|+++||++++...|......+.... |+++.+|+||+|.|. .. ......++.++..+++.++.. +++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE-KVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC-ceEEEEec
Confidence 5599999999999988887444443321 899999999999986 11 345555589999999999887 69999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+||.++..++..+|++++++|++++...
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999999999999999999999998754
No 61
>PLN00021 chlorophyllase
Probab=99.44 E-value=1.1e-12 Score=112.75 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=75.5
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----hc-----CCC
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE----NL-----LED 163 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~----~l-----~~~ 163 (230)
+..|+|||+||++.+...|..++++|+++||.|+++|++|++... ....+.+ +.++.+++. .+ ..+
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~----~~~~i~d-~~~~~~~l~~~l~~~l~~~~~~d 124 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPD----GTDEIKD-AAAVINWLSSGLAAVLPEGVRPD 124 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCC----chhhHHH-HHHHHHHHHhhhhhhcccccccC
Confidence 446899999999998888999999999999999999999865321 1122222 223333332 21 111
Q ss_pred -CcEEEEEEchhHHHHHHHHHhCCc-----ccceEEEecccc
Q 026967 164 -EKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATM 199 (230)
Q Consensus 164 -~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~vv~i~~~~ 199 (230)
++++++|||+||.+++.+|..+++ +++++|.+++..
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 489999999999999999988764 589999998864
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.41 E-value=8.2e-13 Score=106.70 Aligned_cols=75 Identities=24% Similarity=0.314 Sum_probs=69.9
Q ss_pred CeEEEeCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 123 LIPTALDLKGSGIDLS---DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 123 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
|+|+++|+||+|.|+. .....++..+.+.++..++++++.+ +++++||||||.+++.+|..+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 6899999999999985 4567789999999999999999998 7999999999999999999999999999999986
No 63
>PLN02872 triacylglycerol lipase
Probab=99.41 E-value=8.9e-13 Score=116.61 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=80.7
Q ss_pred cceEEEECCCCCChhhHH------HHHHHHHHCCCeEEEeCCCCCCCCCCC-----CC---CCCCHHHHH-HHHHHHHHh
Q 026967 95 YKKFVLIHGEGFGAWCWY------KTVASLEEVGLIPTALDLKGSGIDLSD-----TN---SVTTLAEYS-KPLLDYLEN 159 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~G~S~~~-----~~---~~~~~~~~~-~~l~~~l~~ 159 (230)
+++|||+||++.+...|. .++..|+++||+|+++|+||++.|... .. ...++.+++ .|+.++++.
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~ 153 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHY 153 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHH
Confidence 578999999998888873 356678999999999999998865321 11 134677777 688888887
Q ss_pred cC--CCCcEEEEEEchhHHHHHHHHHhCCc---ccceEEEeccccCC
Q 026967 160 LL--EDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVS 201 (230)
Q Consensus 160 l~--~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~~~ 201 (230)
+. ...+++++|||+||.+++.++ .+|+ +|+.+++++|....
T Consensus 154 i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 154 VYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYL 199 (395)
T ss_pred HHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhh
Confidence 62 125999999999999998555 5676 68888888887543
No 64
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.41 E-value=8.2e-12 Score=105.47 Aligned_cols=107 Identities=18% Similarity=0.160 Sum_probs=76.9
Q ss_pred CcceEEEECCCCCChhhHHHH--H-HHHHHCCCeEEEeCC--CCCCCCCCC-------------------CCCCCCHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCWYKT--V-ASLEEVGLIPTALDL--KGSGIDLSD-------------------TNSVTTLAEY 149 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~--~-~~L~~~G~~vi~~D~--~G~G~S~~~-------------------~~~~~~~~~~ 149 (230)
+.|+|||+||++.+.+.|... + ..+.+.|+.|++||. +|+|.+..+ ....+...++
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 468999999999988887532 3 444567999999998 454432100 0011233333
Q ss_pred -HHHHHHHHHhc-CC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 150 -SKPLLDYLENL-LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 150 -~~~l~~~l~~l-~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
.+++..+++.. .. .++++++||||||++++.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 56777777762 32 24899999999999999999999999999999988754
No 65
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.39 E-value=3.9e-12 Score=112.42 Aligned_cols=107 Identities=12% Similarity=0.161 Sum_probs=84.1
Q ss_pred CcceEEEECCCCCChhh-------------HHHHHH---HHHHCCCeEEEeCCCCCCCCCCC------------------
Q 026967 94 QYKKFVLIHGEGFGAWC-------------WYKTVA---SLEEVGLIPTALDLKGSGIDLSD------------------ 139 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~-------------~~~~~~---~L~~~G~~vi~~D~~G~G~S~~~------------------ 139 (230)
+.++||++|++.++... |..++- .|--.-|.||++|..|.|.|..+
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 45799999999775421 544442 34334599999999998753211
Q ss_pred --CCCCCCHHHHHHHHHHHHHhcCCCCcEE-EEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 140 --TNSVTTLAEYSKPLLDYLENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 140 --~~~~~~~~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
....+++.++++++..++++++.. ++. ++||||||++++.+|.++|++|+++|++++....
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 123478999999999999999998 775 9999999999999999999999999999887644
No 66
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.37 E-value=5.2e-12 Score=118.82 Aligned_cols=90 Identities=21% Similarity=0.169 Sum_probs=75.7
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCC---------CCC-------------CCCHHHHHHH
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSD---------TNS-------------VTTLAEYSKP 152 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~---------~~~-------------~~~~~~~~~~ 152 (230)
.|+|||+||++++.+.|..+++.|.++||.|+++|+||||.+... ... .+.+.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 468999999999999999999999999999999999999998432 111 1378899999
Q ss_pred HHHHHHhcC--------------C-CCcEEEEEEchhHHHHHHHHHh
Q 026967 153 LLDYLENLL--------------E-DEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 153 l~~~l~~l~--------------~-~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+..+...+. . ..+++++||||||.+++.++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888776 1 2599999999999999998864
No 67
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.37 E-value=5.2e-12 Score=86.68 Aligned_cols=64 Identities=20% Similarity=0.323 Sum_probs=59.1
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (230)
+.+|+++||++.+...|..+++.|+++||.|+++|++|||.|........+++++++|+..+++
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5689999999999999999999999999999999999999998767778899999999998874
No 68
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.36 E-value=8e-12 Score=113.92 Aligned_cols=113 Identities=15% Similarity=0.055 Sum_probs=83.1
Q ss_pred CcceEEEECCCCCChhhHH-----HHHHHHHHCCCeEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhcCCCCcEE
Q 026967 94 QYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDTNS-VTTLAEYSKPLLDYLENLLEDEKVI 167 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (230)
.+++||++||+......|+ .++++|.++||+|+++|++|+|.+..+... .+..+.....+..+.+.++.. +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~-kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK-QVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC-CeE
Confidence 4579999999987777775 699999999999999999999987543221 222233444555555556655 999
Q ss_pred EEEEchhHHHHH----HHHHhC-CcccceEEEeccccCCCCCChh
Q 026967 168 LVGHSSGGACVS----YALEHF-PQKISKAIFLCATMVSDGQRPF 207 (230)
Q Consensus 168 lvGhS~Gg~~a~----~~a~~~-p~~v~~vv~i~~~~~~~~~~~~ 207 (230)
++|||+||.++. .++..+ +++|++++++++.+........
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l 310 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGEL 310 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchh
Confidence 999999999852 244444 7789999999998776544333
No 69
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.34 E-value=1.4e-11 Score=104.15 Aligned_cols=111 Identities=18% Similarity=0.210 Sum_probs=92.9
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEEE
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVIL 168 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~l 168 (230)
...|++|++||+-++.+.|..+...|+.. |-.|+++|.|.||.|.. ....+...++.|+..+++.... ..++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~--~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPK--ITVHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcc--ccccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 45789999999999999999999999764 78999999999999863 4455689999999999998852 349999
Q ss_pred EEEchhH-HHHHHHHHhCCcccceEEEeccccCCCCCC
Q 026967 169 VGHSSGG-ACVSYALEHFPQKISKAIFLCATMVSDGQR 205 (230)
Q Consensus 169 vGhS~Gg-~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~ 205 (230)
+|||||| .+++..+...|+.+..+|+++..+...+.+
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~ 165 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS 165 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc
Confidence 9999999 667777788899999999998877533333
No 70
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.34 E-value=1.1e-11 Score=114.38 Aligned_cols=105 Identities=13% Similarity=-0.013 Sum_probs=78.6
Q ss_pred CCcceEEEECCCCCChh---hH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CC-CC
Q 026967 93 IQYKKFVLIHGEGFGAW---CW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LE-DE 164 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~---~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~-~~ 164 (230)
+..|+||++||++.... .+ ......|.++||.|+++|+||+|.|....... . ...++|+.++++.+ .. +.
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~-~-~~~~~D~~~~i~~l~~q~~~~~ 97 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL-G-SDEAADGYDLVDWIAKQPWCDG 97 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-C-cccchHHHHHHHHHHhCCCCCC
Confidence 35679999999987653 22 23556788899999999999999997533222 1 33445555555544 22 25
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+|.++|||+||.+++.+|..+|++++++|..++..
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 99999999999999999999999999999988774
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.32 E-value=5.2e-11 Score=101.07 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=74.8
Q ss_pred CCcceEEEECCCCCChhhHHH---HHHHHHHCCCeEEEeCCCCCCCC-----CC-----------CCC-C---CCCH-HH
Q 026967 93 IQYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGID-----LS-----------DTN-S---VTTL-AE 148 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~S-----~~-----------~~~-~---~~~~-~~ 148 (230)
.+.|+|+|+||+.++...|.. +.+.+...|+.|++||..++|.- .. +.. . .... ..
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 356899999999888877743 44677788999999998876511 00 000 0 0011 11
Q ss_pred HHHHHHHHHH----hcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 149 YSKPLLDYLE----NLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 149 ~~~~l~~~l~----~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
..+++..+++ .+..+ +++|+|||+||++++.++.++|+++++++.+++...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 2333433343 34444 899999999999999999999999999999998764
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.32 E-value=1.7e-11 Score=107.39 Aligned_cols=127 Identities=16% Similarity=0.107 Sum_probs=84.5
Q ss_pred ceeeeeecccCC-eeeEEeecC--CCcceEEEECCCCCChhhHHH-HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHH
Q 026967 72 RRRTLSESLSNG-KQDTNILEN--IQYKKFVLIHGEGFGAWCWYK-TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLA 147 (230)
Q Consensus 72 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~vvliHG~~~~~~~~~~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~ 147 (230)
....+.+|..+. ...+++... .+.|+||++.|+.+..+++.. +.++|..+|+.++++|.||.|.|....... +.+
T Consensus 164 ~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~-D~~ 242 (411)
T PF06500_consen 164 PIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ-DSS 242 (411)
T ss_dssp EEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S--CC
T ss_pred CcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc-CHH
Confidence 345666776653 222344443 334678888888888877554 456799999999999999999986433333 234
Q ss_pred HHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 148 EYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.....+.++|..+.. ..+|.++|.|+||+++.++|..++++++++|.+++.+
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 556777888877764 2599999999999999999998889999999999975
No 73
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.28 E-value=4.3e-11 Score=97.72 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=86.1
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
++|+++|+.+++...|..+++.|...++.|+.++.+|.+. +.....++++.+....+.+.......++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~---~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGD---DEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCT---TSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCC---CCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 4799999999999999999999998559999999999982 2345578999999888888877665699999999999
Q ss_pred HHHHHHHHhC---CcccceEEEeccccCC
Q 026967 176 ACVSYALEHF---PQKISKAIFLCATMVS 201 (230)
Q Consensus 176 ~~a~~~a~~~---p~~v~~vv~i~~~~~~ 201 (230)
.+|+.+|... -..+..+++++++.+.
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 9999998653 3458899999987654
No 74
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.26 E-value=6.2e-11 Score=116.25 Aligned_cols=104 Identities=22% Similarity=0.238 Sum_probs=81.8
Q ss_pred CcceEEEECCCCCChhhHHHH-----HHHHHHCCCeEEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHh---cCCCC
Q 026967 94 QYKKFVLIHGEGFGAWCWYKT-----VASLEEVGLIPTALDLKGSGIDLSDTN-SVTTLAEYSKPLLDYLEN---LLEDE 164 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~-----~~~L~~~G~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~---l~~~~ 164 (230)
.+++|||+||+..+...|+.. ++.|.++||+|+++|+ |.++.+.. ...++.+++..+.+.++. +..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~- 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR- 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC-
Confidence 468999999999999999864 8999999999999994 55543222 236788887777777765 3334
Q ss_pred cEEEEEEchhHHHHHHHHHhC-CcccceEEEeccccCC
Q 026967 165 KVILVGHSSGGACVSYALEHF-PQKISKAIFLCATMVS 201 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~-p~~v~~vv~i~~~~~~ 201 (230)
+++++||||||.+++.++..+ +++|+++|+++++...
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 899999999999998887654 5589999998888654
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.25 E-value=7.1e-11 Score=97.43 Aligned_cols=107 Identities=12% Similarity=0.081 Sum_probs=71.8
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCC-------CCCCC---CCCCC---CHHHHHHHHHHHHH-
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG-------IDLSD---TNSVT---TLAEYSKPLLDYLE- 158 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G-------~S~~~---~~~~~---~~~~~~~~l~~~l~- 158 (230)
+..++||++||++++...|..++..|...++.+..++.+|.. .++.+ ..... .+.+....+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 446789999999999999999999998876555555544432 11110 01111 12233333333333
Q ss_pred ---hcCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 159 ---NLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 159 ---~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
..+. .++|+++|||+||.+++.++..+|+.+.++|.+++..
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 3333 2589999999999999999988998888888887764
No 76
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.21 E-value=4.1e-10 Score=92.49 Aligned_cols=106 Identities=21% Similarity=0.140 Sum_probs=71.1
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHH--------CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHhc-
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEE--------VGLIPTALDLKGSGIDLSDTNSVTTLAEYSK----PLLDYLENL- 160 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~--------~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~----~l~~~l~~l- 160 (230)
.+.+||||||..++...|+.+...+.+ ..++++++|+....... ....+.+..+ .+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~----~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF----HGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc----ccccHHHHHHHHHHHHHHHHHhhh
Confidence 467999999999988888777665522 24789999987643221 1122222222 333333333
Q ss_pred ---CCCCcEEEEEEchhHHHHHHHHHhCC---cccceEEEeccccCCCC
Q 026967 161 ---LEDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSDG 203 (230)
Q Consensus 161 ---~~~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~vv~i~~~~~~~~ 203 (230)
....+|+||||||||.++..++...+ +.|+.+|.++.+.....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 23469999999999999988876533 47999999998876544
No 77
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.19 E-value=4.7e-10 Score=94.42 Aligned_cols=114 Identities=21% Similarity=0.298 Sum_probs=95.4
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHC---CCeEEEeCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHhcC-----
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEV---GLIPTALDLKGSGIDLSD-----TNSVTTLAEYSKPLLDYLENLL----- 161 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~---G~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~l~~l~----- 161 (230)
+..||||+|.++-.+.|..+...|.+. .+.|+++.+.||-.+... ....+++++.++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999988754 699999999999877643 4567899999999888887753
Q ss_pred CCCcEEEEEEchhHHHHHHHHHhCC---cccceEEEeccccCCCCCChhh
Q 026967 162 EDEKVILVGHSSGGACVSYALEHFP---QKISKAIFLCATMVSDGQRPFD 208 (230)
Q Consensus 162 ~~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~vv~i~~~~~~~~~~~~~ 208 (230)
...+++++|||.|++++++++.+++ .+|.+++++-|++..-..++..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchh
Confidence 3468999999999999999999998 7899999999987555444433
No 78
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.19 E-value=1.5e-11 Score=97.18 Aligned_cols=121 Identities=20% Similarity=0.155 Sum_probs=95.9
Q ss_pred cCCeeeEEeecCCCcceEEEECCC-CCChhhHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCC--CCCCHHHHHHHHHHH
Q 026967 81 SNGKQDTNILENIQYKKFVLIHGE-GFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDY 156 (230)
Q Consensus 81 ~~~~~~~~~~~~~~~~~vvliHG~-~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~ 156 (230)
.++.++.+...+.+...|+++.|. |....+|...+..|-+. -++|+++|.||+|.|..+.. ...-+...+++..++
T Consensus 28 vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdL 107 (277)
T KOG2984|consen 28 VNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDL 107 (277)
T ss_pred ecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHH
Confidence 356677777766666789999998 44556898777666543 38999999999999974332 223445667788888
Q ss_pred HHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 157 LENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 157 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
++.|... ++.|+|+|-||..++..|.++++.|+++|.+++....+
T Consensus 108 M~aLk~~-~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn 152 (277)
T KOG2984|consen 108 MEALKLE-PFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN 152 (277)
T ss_pred HHHhCCC-CeeEeeecCCCeEEEEeeccChhhhhhheeecccceec
Confidence 8899887 99999999999999999999999999999998876544
No 79
>PRK10162 acetyl esterase; Provisional
Probab=99.17 E-value=3.5e-10 Score=97.55 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=72.7
Q ss_pred CCcceEEEECCCCC---ChhhHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCCCCHHHHH---HHHHHHHHhcCCC-C
Q 026967 93 IQYKKFVLIHGEGF---GAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYS---KPLLDYLENLLED-E 164 (230)
Q Consensus 93 ~~~~~vvliHG~~~---~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~---~~l~~~l~~l~~~-~ 164 (230)
...|+||++||++. +...|..+...|+. .|+.|+.+|++....... ...+.+.. +.+.+..+.++.+ +
T Consensus 79 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~----p~~~~D~~~a~~~l~~~~~~~~~d~~ 154 (318)
T PRK10162 79 DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF----PQAIEEIVAVCCYFHQHAEDYGINMS 154 (318)
T ss_pred CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC----CCcHHHHHHHHHHHHHhHHHhCCChh
Confidence 34578999999874 45568888888876 599999999997654321 12333332 2333333345542 5
Q ss_pred cEEEEEEchhHHHHHHHHHhC------CcccceEEEeccccC
Q 026967 165 KVILVGHSSGGACVSYALEHF------PQKISKAIFLCATMV 200 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~------p~~v~~vv~i~~~~~ 200 (230)
+|+|+|+|+||.+++.++... +..+.++|++.+...
T Consensus 155 ~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 155 RIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 999999999999998887542 357899999988754
No 80
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.17 E-value=6.6e-10 Score=88.70 Aligned_cols=112 Identities=19% Similarity=0.214 Sum_probs=87.3
Q ss_pred EeecCCCcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCc
Q 026967 88 NILENIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEK 165 (230)
Q Consensus 88 ~~~~~~~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 165 (230)
.....++...+|++||+-++.. ....++..|++.|+.++.+|++|.|.|... .........++|+..+++++....+
T Consensus 26 ~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-f~~Gn~~~eadDL~sV~q~~s~~nr 104 (269)
T KOG4667|consen 26 LLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-FYYGNYNTEADDLHSVIQYFSNSNR 104 (269)
T ss_pred ceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-cccCcccchHHHHHHHHHHhccCce
Confidence 4445566779999999977665 345688899999999999999999999742 2222444455888888888876423
Q ss_pred E--EEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 166 V--ILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 166 v--~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
+ +++|||-||.+++.++.++.+ ++.+|.+++-...
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl 141 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDL 141 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccch
Confidence 3 489999999999999999876 8889998887544
No 81
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.15 E-value=9.9e-10 Score=90.11 Aligned_cols=102 Identities=17% Similarity=0.218 Sum_probs=80.9
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS 172 (230)
.+++++.||....-.....+...|.. .+++|+.+|+.|+|.|.+.+... ..-+.++.+.++|+.-. .+++|+|+|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 47999999995555443334444443 36999999999999998755554 55666788888887766 35699999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEecccc
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+|...++.+|.+.| ++++|+.+|+.
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHSPFT 163 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEeccch
Confidence 99999999999988 99999999985
No 82
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.09 E-value=9.4e-10 Score=91.24 Aligned_cols=107 Identities=27% Similarity=0.233 Sum_probs=73.9
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh-cC----CC-Cc
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN-LL----ED-EK 165 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-l~----~~-~~ 165 (230)
.+.-|+|||+||+......|..++++++.+||.|+++|+...+... .........+.++.+.+=++. +. .+ .+
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~ 92 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESKLPLGVKPDFSK 92 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhhccccccccccc
Confidence 4557899999999966666788999999999999999966543211 111111222222222221111 11 12 58
Q ss_pred EEEEEEchhHHHHHHHHHhC-----CcccceEEEecccc
Q 026967 166 VILVGHSSGGACVSYALEHF-----PQKISKAIFLCATM 199 (230)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~-----p~~v~~vv~i~~~~ 199 (230)
+.|.|||-||-++..++..+ +.+++++|+++|.-
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999998877 55899999999876
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.06 E-value=2.1e-09 Score=91.09 Aligned_cols=106 Identities=17% Similarity=0.205 Sum_probs=69.7
Q ss_pred CCcceEEEECCCCCChh-h-HHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---hcCCCCcEE
Q 026967 93 IQYKKFVLIHGEGFGAW-C-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE---NLLEDEKVI 167 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~-~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~---~l~~~~~v~ 167 (230)
...|.||++||+.++.. . -..+..++.++||.|+++|+|||+.+....+..++.-. ..|+..+++ ......++.
T Consensus 73 ~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~-t~D~~~~l~~l~~~~~~r~~~ 151 (345)
T COG0429 73 AKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGE-TEDIRFFLDWLKARFPPRPLY 151 (345)
T ss_pred cCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccc-hhHHHHHHHHHHHhCCCCceE
Confidence 44679999999955443 3 45799999999999999999999987632222222111 144444443 334456999
Q ss_pred EEEEchhHHH-HHHHHHhCCc-ccceEEEecccc
Q 026967 168 LVGHSSGGAC-VSYALEHFPQ-KISKAIFLCATM 199 (230)
Q Consensus 168 lvGhS~Gg~~-a~~~a~~~p~-~v~~vv~i~~~~ 199 (230)
.||.|+||.+ +.+++++.-+ .+.+.+.++.+.
T Consensus 152 avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 152 AVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred EEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 9999999954 5555554222 356666665553
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.03 E-value=1.7e-09 Score=88.16 Aligned_cols=112 Identities=15% Similarity=0.170 Sum_probs=67.5
Q ss_pred cCCCcceEEEECCCCCChhhHHHHHHH-HHHCCCeEEEeCCCC------CCC---CCCC-----CCC---CCCHHHHHHH
Q 026967 91 ENIQYKKFVLIHGEGFGAWCWYKTVAS-LEEVGLIPTALDLKG------SGI---DLSD-----TNS---VTTLAEYSKP 152 (230)
Q Consensus 91 ~~~~~~~vvliHG~~~~~~~~~~~~~~-L~~~G~~vi~~D~~G------~G~---S~~~-----~~~---~~~~~~~~~~ 152 (230)
..+..++|||+||+|.+...|...... +......++.++-|- .|. ++.+ ... ...+...++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 455678999999999999777666552 233357788776542 233 3211 111 1223344445
Q ss_pred HHHHHHhc---CC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 153 LLDYLENL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 153 l~~~l~~l---~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
+.++++.. .. .++|+++|+|.||++++.++..+|+.+.++|.++++.+..
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc
Confidence 55555532 22 2599999999999999999999999999999999997654
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.02 E-value=4.6e-09 Score=82.51 Aligned_cols=105 Identities=17% Similarity=0.154 Sum_probs=77.8
Q ss_pred CCcceEEEECCC---C--CChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcE-
Q 026967 93 IQYKKFVLIHGE---G--FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV- 166 (230)
Q Consensus 93 ~~~~~vvliHG~---~--~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v- 166 (230)
+..|+.|++|-- + .+....+.++..|.++||.++.+|++|.|.|..+-+....-.+.+..+.+++.....+.+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 456677777754 2 2333567788999999999999999999999876555545555567777788777765455
Q ss_pred EEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 167 ILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
.|.|+|+|+++++.+|.+.|+ +...+.+.+.
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~ 136 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPE-ILVFISILPP 136 (210)
T ss_pred hhcccchHHHHHHHHHHhccc-ccceeeccCC
Confidence 789999999999999998875 4444444444
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.01 E-value=6.6e-09 Score=84.56 Aligned_cols=103 Identities=19% Similarity=0.110 Sum_probs=69.5
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCC-CCCCCCC-CC--------CHHHHHHHHHHHHHhcCC-
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGI-DLSDTNS-VT--------TLAEYSKPLLDYLENLLE- 162 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~-S~~~~~~-~~--------~~~~~~~~l~~~l~~l~~- 162 (230)
+.|.||++|++.+-......+++.|+++||.|++||+-+-.. ....... .. ..+....++.+.++.+..
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999998877777889999999999999999764433 1111110 00 123344555455554432
Q ss_pred ----CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 163 ----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 163 ----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
..+|.++|+||||.+++.++... +.++++|..-+
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 25999999999999999999876 57999998877
No 87
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.00 E-value=2.5e-09 Score=91.60 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=88.1
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHC---C------CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEE
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEV---G------LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVI 167 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~---G------~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~ 167 (230)
+++++|||.++-+.|++++..|.+. | |.||+|.+||+|.|+.+........+.+.-+..++-.++.+ +..
T Consensus 154 PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~n-kff 232 (469)
T KOG2565|consen 154 PLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYN-KFF 232 (469)
T ss_pred ceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcc-eeE
Confidence 7999999999999999999999764 3 68999999999999987777778888888888999999988 999
Q ss_pred EEEEchhHHHHHHHHHhCCcccceEEEe
Q 026967 168 LVGHSSGGACVSYALEHFPQKISKAIFL 195 (230)
Q Consensus 168 lvGhS~Gg~~a~~~a~~~p~~v~~vv~i 195 (230)
|-|-.||..++..+|..+|++|.++-+=
T Consensus 233 iqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 233 IQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred eecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 9999999999999999999998876543
No 88
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.99 E-value=8.3e-09 Score=90.23 Aligned_cols=106 Identities=15% Similarity=0.120 Sum_probs=72.0
Q ss_pred CcceEEEECCCCCC-hhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 94 QYKKFVLIHGEGFG-AWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVT--TLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 94 ~~~~vvliHG~~~~-~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~--~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
..|+||++||+.++ .+.| ..++..+.+.||++++++.||+|.+.-..+..+ ...+....+.+.+.+..+..++..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~av 203 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAV 203 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEE
Confidence 45899999999544 4444 568888889999999999999998864333222 2222233334444444445699999
Q ss_pred EEchhHHHHHHHHHhCCc---ccceEEEecccc
Q 026967 170 GHSSGGACVSYALEHFPQ---KISKAIFLCATM 199 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~ 199 (230)
|.||||++...+..+..+ .+.++.+.+||-
T Consensus 204 G~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred EecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 999999999888765433 345555555554
No 89
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.99 E-value=1.3e-09 Score=95.95 Aligned_cols=109 Identities=19% Similarity=0.211 Sum_probs=63.8
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC-CCC-----CC-----C-------C------C---CCC-
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GID-----LS-----D-------T------N---SVT- 144 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S-----~~-----~-------~------~---~~~- 144 (230)
..-|+|||-||++++...|..+...|+.+||-|+++|++.. +-. +. . . . ...
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 44689999999999999999999999999999999999942 210 00 0 0 0 000
Q ss_pred ------CHHHHHHHHHHHHHhcC----------------------C---CCcEEEEEEchhHHHHHHHHHhCCcccceEE
Q 026967 145 ------TLAEYSKPLLDYLENLL----------------------E---DEKVILVGHSSGGACVSYALEHFPQKISKAI 193 (230)
Q Consensus 145 ------~~~~~~~~l~~~l~~l~----------------------~---~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv 193 (230)
.++..+.++..+++.+. . -.+|.++|||+||..++.++... .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 11223344444443220 0 14799999999999999988775 6799999
Q ss_pred EeccccCCC
Q 026967 194 FLCATMVSD 202 (230)
Q Consensus 194 ~i~~~~~~~ 202 (230)
++++|+.+.
T Consensus 257 ~LD~W~~Pl 265 (379)
T PF03403_consen 257 LLDPWMFPL 265 (379)
T ss_dssp EES---TTS
T ss_pred EeCCcccCC
Confidence 999998754
No 90
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.99 E-value=3.9e-09 Score=84.49 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=85.1
Q ss_pred EeecCCCcceEEEECCCCCChhhHHHHHHHH-HHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC--CC
Q 026967 88 NILENIQYKKFVLIHGEGFGAWCWYKTVASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DE 164 (230)
Q Consensus 88 ~~~~~~~~~~vvliHG~~~~~~~~~~~~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~ 164 (230)
....+.+.|+++++|+..++-.+...++.-+ ...+.+|+.+++||+|.|.+.+. ...+...++.+.+++..... ..
T Consensus 71 ~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-E~GL~lDs~avldyl~t~~~~dkt 149 (300)
T KOG4391|consen 71 LMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-EEGLKLDSEAVLDYLMTRPDLDKT 149 (300)
T ss_pred eecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc-ccceeccHHHHHHHHhcCccCCcc
Confidence 3335668899999999999988877777644 45589999999999999986433 23444444444444433322 25
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
++++.|-|+||.+++.+|.++.+++.++|+-+.+..
T Consensus 150 kivlfGrSlGGAvai~lask~~~ri~~~ivENTF~S 185 (300)
T KOG4391|consen 150 KIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLS 185 (300)
T ss_pred eEEEEecccCCeeEEEeeccchhheeeeeeechhcc
Confidence 999999999999999999999999999999888753
No 91
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.98 E-value=4.1e-09 Score=105.93 Aligned_cols=104 Identities=14% Similarity=0.019 Sum_probs=88.8
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
+.+++++++||++++...|..+++.|.. ++.|+++|.+|++.. ....++++++++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~---~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGP---MQTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCC---CCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3457899999999999999999999977 499999999999854 234579999999999999887655589999999
Q ss_pred hhHHHHHHHHHh---CCcccceEEEeccccC
Q 026967 173 SGGACVSYALEH---FPQKISKAIFLCATMV 200 (230)
Q Consensus 173 ~Gg~~a~~~a~~---~p~~v~~vv~i~~~~~ 200 (230)
+||.++..+|.+ .++++..++++++...
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWPP 1172 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCCc
Confidence 999999999875 5778999999987543
No 92
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.97 E-value=7.8e-09 Score=96.79 Aligned_cols=125 Identities=18% Similarity=0.160 Sum_probs=85.6
Q ss_pred ceeeeeecccCCeeeE--EeecCCC-----cceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCC---C--
Q 026967 72 RRRTLSESLSNGKQDT--NILENIQ-----YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID---L-- 137 (230)
Q Consensus 72 ~~~~~~~~~~~~~~~~--~~~~~~~-----~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S---~-- 137 (230)
..+.+.....++..+. ++.+.+. -|+||++||++.... .|....+.|+..||.|+.+|+||++.- -
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHH
Confidence 3444555555565555 3333221 278999999965544 467788999999999999999986431 1
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 138 --SDTNSVTTLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 138 --~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
........++|..+.+. ++.+.+. .+++.|+|||+||++++.++...| .+++.|...+.
T Consensus 444 ~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~ 506 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGG 506 (620)
T ss_pred hhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCc
Confidence 11223345666666666 6666554 259999999999999999999887 67777766653
No 93
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.96 E-value=1.9e-09 Score=87.27 Aligned_cols=94 Identities=16% Similarity=0.130 Sum_probs=63.4
Q ss_pred hHHHHHHHHHHCCCeEEEeCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHhc----CC-CCcEEEEEEchhHHHHHHH
Q 026967 110 CWYKTVASLEEVGLIPTALDLKGSGIDLS---DTNSVTTLAEYSKPLLDYLENL----LE-DEKVILVGHSSGGACVSYA 181 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l~~l----~~-~~~v~lvGhS~Gg~~a~~~ 181 (230)
.|......|+++||.|+.+|+||.+.... .......-...++|+.+.++.+ .. .++|.++|||+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 34567788999999999999999874210 0111112233345555555444 22 2599999999999999999
Q ss_pred HHhCCcccceEEEeccccCCCC
Q 026967 182 LEHFPQKISKAIFLCATMVSDG 203 (230)
Q Consensus 182 a~~~p~~v~~vv~i~~~~~~~~ 203 (230)
+..+|+.++++|..++......
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTC
T ss_pred hcccceeeeeeeccceecchhc
Confidence 9999999999999998765543
No 94
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.94 E-value=6.7e-09 Score=89.29 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=90.0
Q ss_pred CcceEEEECCCCCChhhHH-------HHHHHH-------HHCCCeEEEeCCCCCCC-CCC----CCC--------CCCCH
Q 026967 94 QYKKFVLIHGEGFGAWCWY-------KTVASL-------EEVGLIPTALDLKGSGI-DLS----DTN--------SVTTL 146 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~-------~~~~~L-------~~~G~~vi~~D~~G~G~-S~~----~~~--------~~~~~ 146 (230)
...+|+++|++.++..... .|.+.| .-.-|.||++|..|.+. |+. .+. ...++
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 3568999999987554322 133333 22348999999999763 321 111 44688
Q ss_pred HHHHHHHHHHHHhcCCCCcEE-EEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCCChhhhhHHHHHhhhcCCcc
Q 026967 147 AEYSKPLLDYLENLLEDEKVI-LVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEVCLMLNAPLI 223 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~~~~~~~~~~~~~l~~p~~ 223 (230)
.|++..-..++++|++. ++. |||-||||+.++.++..||++|+++|.|++.....+ ............+..+|-.
T Consensus 130 ~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~-~~ia~~~~~r~AI~~DP~~ 205 (368)
T COG2021 130 RDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSA-QNIAFNEVQRQAIEADPDW 205 (368)
T ss_pred HHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCH-HHHHHHHHHHHHHHhCCCc
Confidence 89999889999999998 655 999999999999999999999999999998654322 2223333444445555544
No 95
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=1.3e-08 Score=84.74 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=88.4
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
|+++++|+.++...+|..+...|... ..|+..+.||.+.- .....+++++++...+.|.......+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~---~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAG---EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccc---ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 57899999999999999999999998 99999999999853 345568999999999999888887799999999999
Q ss_pred HHHHHHHHhC---CcccceEEEeccccC
Q 026967 176 ACVSYALEHF---PQKISKAIFLCATMV 200 (230)
Q Consensus 176 ~~a~~~a~~~---p~~v~~vv~i~~~~~ 200 (230)
.+|..+|.+. .+.|..+++++++..
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999988652 346999999999887
No 96
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.92 E-value=6.3e-09 Score=85.50 Aligned_cols=117 Identities=20% Similarity=0.159 Sum_probs=77.8
Q ss_pred eeeEEeec--CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Q 026967 84 KQDTNILE--NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL 161 (230)
Q Consensus 84 ~~~~~~~~--~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~ 161 (230)
+.+.+... .+.-|.|+|+||+.-....|..+..+++.+||-|+++++-..- ..............++++..-|.++-
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~-~p~~~~Ei~~aa~V~~WL~~gL~~~L 111 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF-PPDGQDEIKSAASVINWLPEGLQHVL 111 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc-CCCchHHHHHHHHHHHHHHhhhhhhC
Confidence 44444443 4557899999999888888999999999999999999987421 11001111122222333333333321
Q ss_pred C------CCcEEEEEEchhHHHHHHHHHhCC--cccceEEEeccccCC
Q 026967 162 E------DEKVILVGHSSGGACVSYALEHFP--QKISKAIFLCATMVS 201 (230)
Q Consensus 162 ~------~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~vv~i~~~~~~ 201 (230)
. -.++.++|||.||-.|..+|..+. -+++++|.++|-...
T Consensus 112 p~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 112 PENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred CCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 1 169999999999999999887663 258889988886433
No 97
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.91 E-value=6.7e-09 Score=81.74 Aligned_cols=89 Identities=24% Similarity=0.288 Sum_probs=64.2
Q ss_pred EEEECCCCCCh-hhHHHHHH-HHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 98 FVLIHGEGFGA-WCWYKTVA-SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 98 vvliHG~~~~~-~~~~~~~~-~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
|+++||++++. ++|..+.+ .|... ++|-.+|+ ...++++|...+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 68999997764 57887554 56665 77777775 12367888888888888653 479999999999
Q ss_pred HHHHHHH-HhCCcccceEEEeccccC
Q 026967 176 ACVSYAL-EHFPQKISKAIFLCATMV 200 (230)
Q Consensus 176 ~~a~~~a-~~~p~~v~~vv~i~~~~~ 200 (230)
..++.++ .....+|.++++++++-.
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHhhcccccccEEEEEcCCCc
Confidence 9999999 777889999999999965
No 98
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.90 E-value=3.4e-08 Score=80.61 Aligned_cols=109 Identities=15% Similarity=0.069 Sum_probs=72.4
Q ss_pred CcceEEEECCCCCChhhHHH---HHHHHHHCCCeEEEeCCCCCCC---CC--CC---CCCCCCHHHHHHHHHHHHHhcCC
Q 026967 94 QYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLKGSGI---DL--SD---TNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~G~G~---S~--~~---~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
+.|.||++||.+.+.+.|.. +.+.-.++||.|+.|+...... .. .. .....+......-+.++..+..+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 35789999999999987754 3444455699999998542110 00 00 11111122222223333344444
Q ss_pred C-CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 163 D-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 163 ~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
+ .+|++.|+|.||.++..++..+|+.|.++..+++.+...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~ 135 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGC 135 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccc
Confidence 3 699999999999999999999999999999998886544
No 99
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.87 E-value=1.2e-08 Score=91.36 Aligned_cols=93 Identities=22% Similarity=0.238 Sum_probs=70.2
Q ss_pred CChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----cCCCCcEEEEEEchhHHHHHHH
Q 026967 106 FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN----LLEDEKVILVGHSSGGACVSYA 181 (230)
Q Consensus 106 ~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~v~lvGhS~Gg~~a~~~ 181 (230)
.....|..+++.|.+.||.+ ..|++|+|.+.... ....++.+++.++++. .+. .+++|+||||||.++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCF 179 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHH
Confidence 45678999999999999865 88999999987532 2234444555554443 344 499999999999999999
Q ss_pred HHhCCcc----cceEEEeccccCCCC
Q 026967 182 LEHFPQK----ISKAIFLCATMVSDG 203 (230)
Q Consensus 182 a~~~p~~----v~~vv~i~~~~~~~~ 203 (230)
+..+|+. |+++|.++++.....
T Consensus 180 l~~~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 180 MSLHSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHHCCHhHHhHhccEEEECCCCCCCc
Confidence 9888864 788999988765443
No 100
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.85 E-value=1.8e-08 Score=84.86 Aligned_cols=109 Identities=15% Similarity=0.077 Sum_probs=75.0
Q ss_pred CCcceEEEECCCCCCh-hhHHHH---------HHHHHHCCCeEEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhcC
Q 026967 93 IQYKKFVLIHGEGFGA-WCWYKT---------VASLEEVGLIPTALDLKGSGIDLSDTNS-VTTLAEYSKPLLDYLENLL 161 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~-~~~~~~---------~~~L~~~G~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~l~~~l~~l~ 161 (230)
...|+||..|+++... ...... ...+.++||.|+..|.||.|.|...... ...-.+...++.+++....
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qp 97 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQP 97 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCT
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCC
Confidence 4457889999998653 212111 1238999999999999999999864433 3333444566666776665
Q ss_pred C-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 162 E-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 162 ~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
. +.+|.++|.|++|...+.+|...|..+++++...+....
T Consensus 98 ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 98 WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 5 259999999999999999999888899999998776543
No 101
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=7.4e-08 Score=79.68 Aligned_cols=104 Identities=18% Similarity=0.176 Sum_probs=78.7
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCC--C----C----CCCHHHHHHHHHHHHHhcC---
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDT--N----S----VTTLAEYSKPLLDYLENLL--- 161 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~--~----~----~~~~~~~~~~l~~~l~~l~--- 161 (230)
|.||++|++.+-......+.+.|+..||.|++||+-+. |.+.... . . .....+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 79999999999888999999999999999999998763 3222111 0 0 1122455666766666653
Q ss_pred --CCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 162 --EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 162 --~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
..++|.++|+||||.+++.++...| .+++.|.+-+...
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~ 147 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI 147 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC
Confidence 1358999999999999999999876 6888888777654
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.83 E-value=5.3e-08 Score=77.64 Aligned_cols=87 Identities=21% Similarity=0.323 Sum_probs=67.3
Q ss_pred EEEECCCCCChhhHH--HHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 98 FVLIHGEGFGAWCWY--KTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 98 vvliHG~~~~~~~~~--~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
|+++||+.++..+.. .+.+.+++.+ ..++++|++ ....+....+.++++....+ .+.|||+|+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-NVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-CeEEEEECh
Confidence 799999998887654 4667787765 456666655 24566677888888888766 699999999
Q ss_pred hHHHHHHHHHhCCcccceEEEeccccC
Q 026967 174 GGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
||+.|.+++.+++ +.+ |+++|.+.
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 9999999999875 444 88888864
No 103
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.83 E-value=1.6e-08 Score=81.55 Aligned_cols=100 Identities=22% Similarity=0.241 Sum_probs=61.0
Q ss_pred EEEECCCCCCh---hhHHHHHHHHH-HCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---cCC-CCcEEEE
Q 026967 98 FVLIHGEGFGA---WCWYKTVASLE-EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLE-DEKVILV 169 (230)
Q Consensus 98 vvliHG~~~~~---~~~~~~~~~L~-~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~-~~~v~lv 169 (230)
||++||++... .....+...++ +.|+.|+.+|+|=..+ ......++|..+.+..++++ ++. .++|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~----~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 76 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE----APFPAALEDVKAAYRWLLKNADKLGIDPERIVLI 76 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT----SSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc----ccccccccccccceeeeccccccccccccceEEe
Confidence 79999997643 23344555555 4899999999993221 11222333433333344444 122 2599999
Q ss_pred EEchhHHHHHHHHHhCCc----ccceEEEeccccCC
Q 026967 170 GHSSGGACVSYALEHFPQ----KISKAIFLCATMVS 201 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~----~v~~vv~i~~~~~~ 201 (230)
|+|.||.+++.++....+ .++++++++|+...
T Consensus 77 G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 77 GDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 999999999988864322 49999999998644
No 104
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.79 E-value=5.5e-09 Score=85.18 Aligned_cols=102 Identities=25% Similarity=0.348 Sum_probs=58.2
Q ss_pred ceEEEECCCCC-ChhhHHHHHHHHHHCCCe---EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC--CCcEEEE
Q 026967 96 KKFVLIHGEGF-GAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVILV 169 (230)
Q Consensus 96 ~~vvliHG~~~-~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lv 169 (230)
.||||+||.+. ....|..+++.|.++||. |+++++-....... ........+.++.+.++++.... ..+|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~-~~~~~~~~~~~~~l~~fI~~Vl~~TGakVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPS-VQNAHMSCESAKQLRAFIDAVLAYTGAKVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTH-HHHHHB-HHHHHHHHHHHHHHHHHHT--EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCc-ccccccchhhHHHHHHHHHHHHHhhCCEEEEE
Confidence 58999999988 567899999999999999 79999753332110 00011122334556656555421 1299999
Q ss_pred EEchhHHHHHHHHHhCC-------------cccceEEEeccc
Q 026967 170 GHSSGGACVSYALEHFP-------------QKISKAIFLCAT 198 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p-------------~~v~~vv~i~~~ 198 (230)
|||+||.++.++..... .++...|.++++
T Consensus 81 gHS~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~ 122 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGA 122 (219)
T ss_dssp EETCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--
T ss_pred EcCCcCHHHHHHHHHcCCCCcccCcccccccccccccccccc
Confidence 99999999988876432 345556666644
No 105
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.79 E-value=4.2e-08 Score=80.09 Aligned_cols=105 Identities=16% Similarity=0.102 Sum_probs=81.2
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
.+..++++|-.|+++..|..|...|... +.++++++||.|.--. .....++++.++.+...+.....+.++.++||||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~-ep~~~di~~Lad~la~el~~~~~d~P~alfGHSm 83 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFG-EPLLTDIESLADELANELLPPLLDAPFALFGHSM 83 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccC-CcccccHHHHHHHHHHHhccccCCCCeeecccch
Confidence 3457899998999999999999998874 9999999999996533 4556789999999988888533345999999999
Q ss_pred hHHHHHHHHHhCCc---ccceEEEeccccC
Q 026967 174 GGACVSYALEHFPQ---KISKAIFLCATMV 200 (230)
Q Consensus 174 Gg~~a~~~a~~~p~---~v~~vv~i~~~~~ 200 (230)
||++|.++|.+... .+.++.+.+...+
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCC
Confidence 99999999876421 2455555444433
No 106
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.78 E-value=2.9e-08 Score=90.40 Aligned_cols=107 Identities=11% Similarity=0.111 Sum_probs=83.6
Q ss_pred cceEEEECCCCCChhhH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCCcE
Q 026967 95 YKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKV 166 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v 166 (230)
+++||+++.+-.....| ..++++|.++||+|+++|+++-+.. ....+++++++.+.+.++.+ ...++|
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~----~r~~~ldDYv~~i~~Ald~V~~~tG~~~v 290 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKA----HREWGLSTYVDALKEAVDAVRAITGSRDL 290 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChh----hcCCCHHHHHHHHHHHHHHHHHhcCCCCe
Confidence 56999999987555555 3599999999999999999976543 23457788887777777665 234599
Q ss_pred EEEEEchhHHHHHH----HHHhCCc-ccceEEEeccccCCCCCC
Q 026967 167 ILVGHSSGGACVSY----ALEHFPQ-KISKAIFLCATMVSDGQR 205 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~----~a~~~p~-~v~~vv~i~~~~~~~~~~ 205 (230)
.++|||+||.++.. ++.++++ +|+.++++.++++.....
T Consensus 291 nl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g 334 (560)
T TIGR01839 291 NLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMES 334 (560)
T ss_pred eEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCC
Confidence 99999999998875 6777885 799999999988766443
No 107
>PRK10115 protease 2; Provisional
Probab=98.77 E-value=1.3e-07 Score=89.48 Aligned_cols=129 Identities=15% Similarity=0.084 Sum_probs=91.2
Q ss_pred eeeeeecccCCeeeEE--ee-c----CCCcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCC---CC--
Q 026967 73 RRTLSESLSNGKQDTN--IL-E----NIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID---LS-- 138 (230)
Q Consensus 73 ~~~~~~~~~~~~~~~~--~~-~----~~~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S---~~-- 138 (230)
...+..+..+|..+.. .. + +++.|+||++||+.+... .|......|.++||.|+.++.||.|.= ..
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~ 495 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYED 495 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHh
Confidence 3344445556655552 22 2 334689999999866553 466667788889999999999997532 11
Q ss_pred --CCCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 139 --DTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 139 --~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
......++.|++..+..+++.-.. .+++.+.|.|.||+++..++..+|++++++|...|....
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 122335677776666666654322 369999999999999999999999999999999887643
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=98.75 E-value=5.7e-08 Score=78.56 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=76.0
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC--C----CCCCCCC--CCC----CHHHHHHHHHHHHHh
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS--G----IDLSDTN--SVT----TLAEYSKPLLDYLEN 159 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~--G----~S~~~~~--~~~----~~~~~~~~l~~~l~~ 159 (230)
.+..|+||++||+|++...+..+.+.+..+ +.++.+.-+-. | .+..+.. ... ..+..++.+..+.++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 345668999999999999888877776665 77777643311 1 0111110 011 222333344444444
Q ss_pred cCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCC
Q 026967 160 LLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 160 l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~ 204 (230)
.+. .++++++|+|.|+++++.+...+|+.++++|++++..+.+..
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~ 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc
Confidence 454 259999999999999999999999999999999998876653
No 109
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.73 E-value=2e-07 Score=78.20 Aligned_cols=122 Identities=11% Similarity=0.152 Sum_probs=81.2
Q ss_pred ecCCC--cceEEEECCCCCChhh-HHHHH-----HHHHHCCCeEEEeCCCCCCCCCCC--CC-CCCCHHHHHHHHHHHHH
Q 026967 90 LENIQ--YKKFVLIHGEGFGAWC-WYKTV-----ASLEEVGLIPTALDLKGSGIDLSD--TN-SVTTLAEYSKPLLDYLE 158 (230)
Q Consensus 90 ~~~~~--~~~vvliHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~~--~~-~~~~~~~~~~~l~~~l~ 158 (230)
.++.+ +|+||=+|-.|-+... |..+. ..+.++ |.|+-+|.||+...... .. ...++++.++++.++++
T Consensus 16 ~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~ 94 (283)
T PF03096_consen 16 QGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLD 94 (283)
T ss_dssp ESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHH
T ss_pred EecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHH
Confidence 34444 8899999999988765 66654 455555 99999999999765422 22 34689999999999999
Q ss_pred hcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCCChhhhhHHHHH
Q 026967 159 NLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEVC 215 (230)
Q Consensus 159 ~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~~~~~~~~~~~ 215 (230)
+++.. .++-+|--.|+++..++|..+|++|.++|++++..-. ....+.+..++.
T Consensus 95 ~f~lk-~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--~gw~Ew~~~K~~ 148 (283)
T PF03096_consen 95 HFGLK-SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--AGWMEWFYQKLS 148 (283)
T ss_dssp HHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH
T ss_pred hCCcc-EEEEEeeccchhhhhhccccCccceeEEEEEecCCCC--ccHHHHHHHHHh
Confidence 99998 9999999999999999999999999999999988654 345555555544
No 110
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.72 E-value=4.5e-07 Score=75.72 Aligned_cols=118 Identities=13% Similarity=0.159 Sum_probs=93.8
Q ss_pred CcceEEEECCCCCChhh-HHHHH-----HHHHHCCCeEEEeCCCCCCCCCC--CCC-CCCCHHHHHHHHHHHHHhcCCCC
Q 026967 94 QYKKFVLIHGEGFGAWC-WYKTV-----ASLEEVGLIPTALDLKGSGIDLS--DTN-SVTTLAEYSKPLLDYLENLLEDE 164 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~-~~~~~-----~~L~~~G~~vi~~D~~G~G~S~~--~~~-~~~~~~~~~~~l~~~l~~l~~~~ 164 (230)
++|+||=.|..+-+... |..++ ..+.++ |-|+-+|.||+-.... +.+ ...++++.+++|..++++++..
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk- 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK- 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc-
Confidence 47889999999887764 66544 456666 9999999999965432 222 3568999999999999999998
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCCChhhhhHHHHH
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVFAEEVC 215 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~~~~~~~~~~~ 215 (230)
.|+-+|--.|+++..++|..||++|-++|+|++.....+ ..+.+.+.+.
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~K~~ 171 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYNKVS 171 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHHHHH
Confidence 999999999999999999999999999999998765433 4445444443
No 111
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.71 E-value=2e-07 Score=76.96 Aligned_cols=108 Identities=14% Similarity=0.155 Sum_probs=71.1
Q ss_pred CCcceEEEECCCCCChhhH-HHHHHHHHHCCC--eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCcE
Q 026967 93 IQYKKFVLIHGEGFGAWCW-YKTVASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKV 166 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~-~~~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v 166 (230)
+++..+|||||+..+-+.- ...++.....++ .++.+.||+.|.-........+...-...+.++|..+. ...+|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 4567999999998876543 344444444444 69999999887532211122233344556666666653 23699
Q ss_pred EEEEEchhHHHHHHHHHh----CC-----cccceEEEeccccC
Q 026967 167 ILVGHSSGGACVSYALEH----FP-----QKISKAIFLCATMV 200 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~----~p-----~~v~~vv~i~~~~~ 200 (230)
.|++||||+.+.+.+... .+ .++..+|+.+|-.+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 999999999998877543 22 36888999887764
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.71 E-value=3.2e-07 Score=70.30 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=80.4
Q ss_pred eEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 97 KFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID-----LSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 97 ~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S-----~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
+||+.||.+.+.+ .....+..|+.+|+.|..+++|-.-.- ..++....-...+...+.++-..+... ++++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g-pLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG-PLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-ceeec
Confidence 7889999988765 467788999999999999999864322 122223334456666777777766666 99999
Q ss_pred EEchhHHHHHHHHHhCCcccceEEEeccccCCCCC
Q 026967 170 GHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~ 204 (230)
||||||-++...+...-..|+++++++-+..+++.
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK 129 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK 129 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCC
Confidence 99999999988887655569999999887766553
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.67 E-value=2.1e-08 Score=86.79 Aligned_cols=109 Identities=19% Similarity=0.204 Sum_probs=64.0
Q ss_pred CCCcceEEEECCCCCCh--hhHH-HHHHHH-HH--CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----C
Q 026967 92 NIQYKKFVLIHGEGFGA--WCWY-KTVASL-EE--VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----L 161 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~--~~~~-~~~~~L-~~--~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~ 161 (230)
+..+|++|++|||..+. ..|. .+.+.+ .. .++.||++||...-... ..............+..+|..| +
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 45678999999997766 4564 455544 44 47999999986321110 0000011222333444444433 2
Q ss_pred C-CCcEEEEEEchhHHHHHHHHHhCCc--ccceEEEeccccCC
Q 026967 162 E-DEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATMVS 201 (230)
Q Consensus 162 ~-~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~vv~i~~~~~~ 201 (230)
. .++++|||||+||.+|-.++..... +|.+++.++|..+.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 2 2599999999999999999988877 89999999998653
No 114
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.66 E-value=5.3e-07 Score=77.85 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=67.0
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-------------------CCCCCHHHHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT-------------------NSVTTLAEYSKPL 153 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-------------------~~~~~~~~~~~~l 153 (230)
+..|.||.+||.++....|...+. ++..||.|+.+|.+|+|....+. ...+-+.....|+
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 345689999999998877766554 66779999999999999321100 0111122334555
Q ss_pred HHHHHhc---CC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 154 LDYLENL---LE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 154 ~~~l~~l---~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
...++.+ .. .++|.+.|.|+||.+++.+|...+ +|++++..-|++.
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc
Confidence 5544443 32 269999999999999999999875 6999999888764
No 115
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.64 E-value=7.5e-08 Score=80.33 Aligned_cols=108 Identities=26% Similarity=0.339 Sum_probs=69.7
Q ss_pred cceEEEECCCCCChhhHHHHHHHHH-HCCC--eEEEeC--CCCC----CCCC---C--------CCCCCCCHHHHHHHHH
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLE-EVGL--IPTALD--LKGS----GIDL---S--------DTNSVTTLAEYSKPLL 154 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~-~~G~--~vi~~D--~~G~----G~S~---~--------~~~~~~~~~~~~~~l~ 154 (230)
..|.|||||++++...+..++..+. +.|. .++.++ --|. |.=. . ......++...+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4589999999999999999999998 6664 344433 3331 2110 0 0111135666677777
Q ss_pred HHHHhcCCC---CcEEEEEEchhHHHHHHHHHhCCc-----ccceEEEeccccCCC
Q 026967 155 DYLENLLED---EKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMVSD 202 (230)
Q Consensus 155 ~~l~~l~~~---~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~vv~i~~~~~~~ 202 (230)
.++..|... .++.+|||||||..++.++..+.. .+.++|.|+++....
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 777665321 499999999999999999877532 589999999986543
No 116
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.63 E-value=9.4e-08 Score=76.02 Aligned_cols=113 Identities=18% Similarity=0.176 Sum_probs=72.9
Q ss_pred eeeE-EeecCCCcceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 84 KQDT-NILENIQYKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 84 ~~~~-~~~~~~~~~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
.+.. ++..+...+.+||+||+-... ..-...+.-+.++||+|..+++ +.+.....-..++.+...-+.-+++.
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~ 131 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKY 131 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHh
Confidence 4444 444567788999999973222 2222355566677999999864 43322112223445555555555666
Q ss_pred cCCCCcEEEEEEchhHHHHHHHHHh-CCcccceEEEecccc
Q 026967 160 LLEDEKVILVGHSSGGACVSYALEH-FPQKISKAIFLCATM 199 (230)
Q Consensus 160 l~~~~~v~lvGhS~Gg~~a~~~a~~-~p~~v~~vv~i~~~~ 199 (230)
....+.+.+-|||.|+.+++.+..+ +..+|.+++++++.-
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 6555578888999999999988654 455899999888753
No 117
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.62 E-value=2.1e-07 Score=80.84 Aligned_cols=105 Identities=20% Similarity=0.172 Sum_probs=59.6
Q ss_pred CCcceEEEECCCCCChhh--------------H----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCC----CCCCHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWC--------------W----YKTVASLEEVGLIPTALDLKGSGIDLSDTN----SVTTLAEYS 150 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~--------------~----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~----~~~~~~~~~ 150 (230)
++.|.||++||=+...+. | ..+...|+++||.|+++|.+|+|+...... ..++....+
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 345689999997665533 1 125778999999999999999997642111 111111111
Q ss_pred ---------------HH---HHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 151 ---------------KP---LLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 151 ---------------~~---l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
-+ +.++|..+.. .++|.++|+||||+.++.++... ++|++.|..+..
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 12 2233333332 26999999999999999999875 589887765443
No 118
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.60 E-value=2.2e-07 Score=75.93 Aligned_cols=88 Identities=20% Similarity=0.269 Sum_probs=51.8
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHC--CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHhcCCC-CcE
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEV--GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPL----LDYLENLLED-EKV 166 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~--G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l----~~~l~~l~~~-~~v 166 (230)
+...|||+||++++..+|..+.+.+... .+.-..+...++... ...+...++..++.+ .+.++..... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n--~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNN--EFKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccc--ccccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 3458999999999999998887777661 122111222222111 112223444444444 3443333332 489
Q ss_pred EEEEEchhHHHHHHHHH
Q 026967 167 ILVGHSSGGACVSYALE 183 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~ 183 (230)
++||||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876654
No 119
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.60 E-value=4.7e-07 Score=77.69 Aligned_cols=106 Identities=11% Similarity=0.072 Sum_probs=71.5
Q ss_pred CcceEEEECCCCCC---hhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---cCC-CCc
Q 026967 94 QYKKFVLIHGEGFG---AWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLE-DEK 165 (230)
Q Consensus 94 ~~~~vvliHG~~~~---~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~-~~~ 165 (230)
..|+||++||++.. .... ......+...|+.|+.+|+|-..+. .....+.+....+..+.++ ++. .++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----~~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----PFPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC----CCCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 46899999999653 3333 5566677788999999999944432 1223444433333333333 333 358
Q ss_pred EEEEEEchhHHHHHHHHHhCCc----ccceEEEeccccCCCC
Q 026967 166 VILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVSDG 203 (230)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~~~p~----~v~~vv~i~~~~~~~~ 203 (230)
|+|+|+|.||.+++.++..-.+ .....+++.++.....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9999999999999888765332 5788999999876553
No 120
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.59 E-value=1.8e-07 Score=81.27 Aligned_cols=102 Identities=23% Similarity=0.261 Sum_probs=82.1
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCe---EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
-++|++||++.+...|..+...+...|+. ++.+++++.. ........-++....+.+.+...+.. ++.++|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ql~~~V~~~l~~~ga~-~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD---GTYSLAVRGEQLFAYVDEVLAKTGAK-KVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC---CCccccccHHHHHHHHHHHHhhcCCC-ceEEEeec
Confidence 48999999988888898888888888887 9999988662 12233345566667777777777766 99999999
Q ss_pred hhHHHHHHHHHhCC--cccceEEEeccccCC
Q 026967 173 SGGACVSYALEHFP--QKISKAIFLCATMVS 201 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p--~~v~~vv~i~~~~~~ 201 (230)
+||..+.+++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999888 789999999888543
No 121
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.58 E-value=1.7e-07 Score=80.87 Aligned_cols=92 Identities=22% Similarity=0.125 Sum_probs=64.1
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCC--CCCCCCCC-----CCCHHHHHHHHHHHH---Hhc---
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG--IDLSDTNS-----VTTLAEYSKPLLDYL---ENL--- 160 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G--~S~~~~~~-----~~~~~~~~~~l~~~l---~~l--- 160 (230)
..|.||+-||.+.....|..+++++++.||.|.++|+||.- ........ ...+.+...|+..+| .++
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 45789999999999999999999999999999999999953 22211111 112223333333333 333
Q ss_pred C-C-----CCcEEEEEEchhHHHHHHHHHhC
Q 026967 161 L-E-----DEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 161 ~-~-----~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
. . ..+|.++|||+||+.++.++...
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhcccc
Confidence 2 1 26999999999999999987543
No 122
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.56 E-value=2.3e-07 Score=79.05 Aligned_cols=101 Identities=17% Similarity=0.177 Sum_probs=71.2
Q ss_pred cceEEEECCCCCChhhHH-HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAWCWY-KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~-~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS 172 (230)
...||++-|..+ .|+ ..+..-.+.||.|+.+++||++.|.+-+....+....-.-+...+..++. .++|++.|||
T Consensus 243 q~LvIC~EGNAG---FYEvG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 243 QDLVICFEGNAG---FYEVGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred ceEEEEecCCcc---ceEeeeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 446777777543 221 23444455699999999999999986554444444433333344555654 3699999999
Q ss_pred hhHHHHHHHHHhCCcccceEEEecccc
Q 026967 173 SGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.||..+.++|..||+ |+++|+-+.+-
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecchh
Confidence 999999999999996 99999876663
No 123
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.56 E-value=1.1e-07 Score=79.95 Aligned_cols=114 Identities=22% Similarity=0.234 Sum_probs=79.2
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCC----CC--C----------------C------C
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLS----DT--N----------------S------V 143 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~----~~--~----------------~------~ 143 (230)
+.+-|.|||-||++++...|..+--.|+.+||-|.++.+|-+-.... +. . . -
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 34457899999999999999999999999999999999997544320 00 0 0 0
Q ss_pred CCHHHHHHHHHHHH---Hhc--------------------CC---CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 144 TTLAEYSKPLLDYL---ENL--------------------LE---DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 144 ~~~~~~~~~l~~~l---~~l--------------------~~---~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
......+.++..+| +++ +. ..++.|+|||+||..++.....+ ..++..|++++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeee
Confidence 01122333333333 221 00 15789999999999988887764 46999999999
Q ss_pred ccCCCCCCh
Q 026967 198 TMVSDGQRP 206 (230)
Q Consensus 198 ~~~~~~~~~ 206 (230)
|+.+-.+..
T Consensus 274 WM~Pl~~~~ 282 (399)
T KOG3847|consen 274 WMFPLDQLQ 282 (399)
T ss_pred eecccchhh
Confidence 998755443
No 124
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.55 E-value=1.4e-06 Score=69.10 Aligned_cols=98 Identities=17% Similarity=0.118 Sum_probs=72.7
Q ss_pred EECCCC--CChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHH
Q 026967 100 LIHGEG--FGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (230)
Q Consensus 100 liHG~~--~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (230)
++|..+ ++...|..+...|... +.|+++|.+|++.+.. ...++++.+..+.+.+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEP---LPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCC---CCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 445443 5677899999999874 9999999999986543 234667777766666555443458999999999999
Q ss_pred HHHHHHh---CCcccceEEEeccccCC
Q 026967 178 VSYALEH---FPQKISKAIFLCATMVS 201 (230)
Q Consensus 178 a~~~a~~---~p~~v~~vv~i~~~~~~ 201 (230)
+..++.. .++.+.+++++++..+.
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPPG 104 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCCC
Confidence 9888765 34568999988876543
No 125
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.50 E-value=1.1e-06 Score=68.30 Aligned_cols=93 Identities=23% Similarity=0.315 Sum_probs=69.2
Q ss_pred ceEEEECCCCCC-hhhHHHHHHH-HHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 96 KKFVLIHGEGFG-AWCWYKTVAS-LEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 96 ~~vvliHG~~~~-~~~~~~~~~~-L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
+.+|++||+.++ ..+|..+.+. |.. +-.++++ ......+++|++.+...+... . .+++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD--------DWEAPVLDDWIARLEKEVNAA-E-GPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC--------CCCCCCHHHHHHHHHHHHhcc-C-CCeEEEEecc
Confidence 578999999655 4578654432 221 3333332 334458899999999999888 3 3799999999
Q ss_pred hHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 174 GGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 174 Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
|+.+++.++.+....|.++++++++-...
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~ 97 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSR 97 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccc
Confidence 99999999988777899999999986544
No 126
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.49 E-value=7.3e-07 Score=72.23 Aligned_cols=93 Identities=18% Similarity=0.320 Sum_probs=65.3
Q ss_pred cCCCcc-eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC--CCCCCHHHHHH-HHHHHHHhcC---CC
Q 026967 91 ENIQYK-KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT--NSVTTLAEYSK-PLLDYLENLL---ED 163 (230)
Q Consensus 91 ~~~~~~-~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~-~l~~~l~~l~---~~ 163 (230)
.++..+ -+++-.+.+-....|+.++.++++.||.|+.+|++|.|+|.... .....+.|++. |+...++.+. ..
T Consensus 25 A~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~ 104 (281)
T COG4757 25 ADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG 104 (281)
T ss_pred CCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC
Confidence 334444 45555555666667788999999999999999999999997432 23456666653 6666665543 23
Q ss_pred CcEEEEEEchhHHHHHHHHH
Q 026967 164 EKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~ 183 (230)
.+.++||||+||.+.-.+..
T Consensus 105 ~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 105 HPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred CceEEeeccccceeeccccc
Confidence 59999999999986554443
No 127
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=4e-07 Score=75.33 Aligned_cols=123 Identities=20% Similarity=0.185 Sum_probs=80.9
Q ss_pred eeeecccCCeeeE--Eeec--C-CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC----C---
Q 026967 75 TLSESLSNGKQDT--NILE--N-IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN----S--- 142 (230)
Q Consensus 75 ~~~~~~~~~~~~~--~~~~--~-~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~----~--- 142 (230)
.++.+..++..+. +... . ...|.||-.||+++..+.|..+..+-. .||.|+.+|.||+|.|+.+.. .
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~ 136 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSD 136 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcC
Confidence 3344444455554 3332 2 446789999999999988877765544 499999999999998742110 0
Q ss_pred -------------CCCHHHHHHHHHHHHHh---cCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 143 -------------VTTLAEYSKPLLDYLEN---LLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 143 -------------~~~~~~~~~~l~~~l~~---l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.+-+.....|+..+++. +.. .++|.+.|.|.||.+++.++...| +|++++.+=|+.
T Consensus 137 pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl 210 (321)
T COG3458 137 PGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFL 210 (321)
T ss_pred CceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccccc
Confidence 01111222344433333 321 369999999999999999998765 788888877764
No 128
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=3e-06 Score=71.04 Aligned_cols=106 Identities=15% Similarity=0.135 Sum_probs=71.8
Q ss_pred CcceEEEECCCCCChhhHHH---HHHHHHHCCCeEEEeCCC-C------CCCCCCCC---CCCCCHHHHHHHHHHHHHhc
Q 026967 94 QYKKFVLIHGEGFGAWCWYK---TVASLEEVGLIPTALDLK-G------SGIDLSDT---NSVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~---~~~~L~~~G~~vi~~D~~-G------~G~S~~~~---~~~~~~~~~~~~l~~~l~~l 160 (230)
+.|.||++||..++...+.. |-+...+.||-|+.||-- + .+.+..+. ....+.....+-+..++.+.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~ 139 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEY 139 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhc
Confidence 34689999999888775543 444445679999999622 1 22221111 12222233333333444444
Q ss_pred CCC-CcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 161 LED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 161 ~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.++ ++|++.|.|-||.++.+++..+|+.+.++..+++..
T Consensus 140 gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 140 GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 543 699999999999999999999999999999999987
No 129
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.43 E-value=7.3e-06 Score=73.14 Aligned_cols=117 Identities=14% Similarity=0.204 Sum_probs=72.2
Q ss_pred CeeeEEeecC----CCcceEEEECCCCCCh-hhHHHHHHHHHHCCC----eEEEeCCCCCCCCCCCCCCCCCHH-HHHHH
Q 026967 83 GKQDTNILEN----IQYKKFVLIHGEGFGA-WCWYKTVASLEEVGL----IPTALDLKGSGIDLSDTNSVTTLA-EYSKP 152 (230)
Q Consensus 83 ~~~~~~~~~~----~~~~~vvliHG~~~~~-~~~~~~~~~L~~~G~----~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~ 152 (230)
...++++..+ ...|+|+++||..... ......++.|.+.|. .++.+|......-..+......+. ...++
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~e 272 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQE 272 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHH
Confidence 3555555542 2357889999963221 122345566666663 367777532111001111111222 23466
Q ss_pred HHHHHHhc-C---CCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 153 LLDYLENL-L---EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 153 l~~~l~~l-~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+.-++++. . ..++.+|+|+||||+.+++++..+|+.+..++.+++..
T Consensus 273 LlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 273 LLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 66666654 1 12578999999999999999999999999999999875
No 130
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.40 E-value=3.1e-06 Score=71.76 Aligned_cols=107 Identities=21% Similarity=0.208 Sum_probs=67.3
Q ss_pred CcceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-------CC
Q 026967 94 QYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-------ED 163 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-------~~ 163 (230)
...+||||.|++.+-. +...+++.|...||.|+-+.+..+- ..-...++++.+++|.++++++. ..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy----~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY----SGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB----TTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc----CCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 3558999999976443 4668999998889999999866311 11123467888888887777552 23
Q ss_pred CcEEEEEEchhHHHHHHHHHhCC-----cccceEEEeccccCCCCC
Q 026967 164 EKVILVGHSSGGACVSYALEHFP-----QKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p-----~~v~~vv~i~~~~~~~~~ 204 (230)
++|+|+|||-|..-++.++.... ..|+++|+-+|--+.+..
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 59999999999999999886542 569999999887655543
No 131
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.37 E-value=1.7e-06 Score=76.55 Aligned_cols=109 Identities=20% Similarity=0.172 Sum_probs=80.0
Q ss_pred CCcceEEEECCCCCChhhHH------HHHHHHHHCCCeEEEeCCCCCCCCCC----CC-----CCCCCHHHHHH-HHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWCWY------KTVASLEEVGLIPTALDLKGSGIDLS----DT-----NSVTTLAEYSK-PLLDY 156 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~------~~~~~L~~~G~~vi~~D~~G~G~S~~----~~-----~~~~~~~~~~~-~l~~~ 156 (230)
+.+|+|++.||+-.++..|. .++-.|+++||.|+.-+.||.-.|.. .+ .-..++.+++. ||-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 66789999999998888885 36678999999999999999776641 11 11224444332 44444
Q ss_pred HHh----cCCCCcEEEEEEchhHHHHHHHHHhCCc---ccceEEEeccccCCC
Q 026967 157 LEN----LLEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVSD 202 (230)
Q Consensus 157 l~~----l~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~~~~ 202 (230)
+++ .+. +++..||||.|+.....++...|+ +|+..++++|.....
T Consensus 151 IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 151 IDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred HHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 444 333 599999999999998888777665 799999999987443
No 132
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.35 E-value=2.7e-05 Score=67.53 Aligned_cols=107 Identities=20% Similarity=0.229 Sum_probs=73.6
Q ss_pred CcceEEEECCCCCCh-----hhHHHHHHHH-HHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----cCC-
Q 026967 94 QYKKFVLIHGEGFGA-----WCWYKTVASL-EEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN----LLE- 162 (230)
Q Consensus 94 ~~~~vvliHG~~~~~-----~~~~~~~~~L-~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----l~~- 162 (230)
..|.|||+||+|+.- ..|..+...+ .+.+..|+.+|+|=.-+.. .+..++|-...+..++++ .+.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~----~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP----FPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC----CCccchHHHHHHHHHHHhHHHHhCCC
Confidence 457899999997633 3566777766 4568899999999444332 233455555555555553 222
Q ss_pred CCcEEEEEEchhHHHHHHHHHh------CCcccceEEEeccccCCCCC
Q 026967 163 DEKVILVGHSSGGACVSYALEH------FPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~------~p~~v~~vv~i~~~~~~~~~ 204 (230)
.++|+|+|-|.||.+|..++.+ .+.++++.|++-|+......
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 2589999999999988776643 24579999999998765443
No 133
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.34 E-value=1.4e-06 Score=72.16 Aligned_cols=107 Identities=17% Similarity=0.209 Sum_probs=64.3
Q ss_pred CcceEEEECCCCCChhhH--HHHHHHHHHCC----CeEEEeCCCCCCCCC--CC-----------CCCCCCHHH-HHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCW--YKTVASLEEVG----LIPTALDLKGSGIDL--SD-----------TNSVTTLAE-YSKPL 153 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~--~~~~~~L~~~G----~~vi~~D~~G~G~S~--~~-----------~~~~~~~~~-~~~~l 153 (230)
.-|+|+++||.......+ ...++.+...| ..+++++..+.+... .. ......+.+ ..++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 456889999972222222 23444444433 345555554444110 00 011112223 34566
Q ss_pred HHHHHhcCC-C-CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 154 LDYLENLLE-D-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 154 ~~~l~~l~~-~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
..+++.... . .+..|+|+||||+.++.++.++|+.+.+++.+++...
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 667665432 2 2389999999999999999999999999999997643
No 134
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.34 E-value=1.5e-05 Score=70.62 Aligned_cols=104 Identities=11% Similarity=0.056 Sum_probs=80.8
Q ss_pred ceEEEECCCCCChhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchh
Q 026967 96 KKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (230)
|+||++.-+.+..... +.+++.|.+ |+.|+..|+.--+.... .....+++++++.+.+++++++. ++.++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-~~~~f~ldDYi~~l~~~i~~~G~--~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-SAGKFDLEDYIDYLIEFIRFLGP--DIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-hcCCCCHHHHHHHHHHHHHHhCC--CCcEEEEchh
Confidence 6899999887655443 568899998 99999999885553321 23456899999999999988854 4999999999
Q ss_pred HHHHHHHHHhC-----CcccceEEEeccccCCCC
Q 026967 175 GACVSYALEHF-----PQKISKAIFLCATMVSDG 203 (230)
Q Consensus 175 g~~a~~~a~~~-----p~~v~~vv~i~~~~~~~~ 203 (230)
|..++.+++.+ |.+++.+++++++++...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 99866555443 667999999999987654
No 135
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.32 E-value=4.2e-06 Score=80.11 Aligned_cols=86 Identities=15% Similarity=0.011 Sum_probs=64.5
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHhc---------------CC-CCcEEEEEEchhH
Q 026967 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSV-TTLAEYSKPLLDYLENL---------------LE-DEKVILVGHSSGG 175 (230)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~~l~~~l~~l---------------~~-~~~v~lvGhS~Gg 175 (230)
.+.+.+..+||.|+.+|.||+|.|.+..... ..-.+...++.+++... .+ +.+|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4668899999999999999999998643221 22223344555555521 11 3599999999999
Q ss_pred HHHHHHHHhCCcccceEEEeccc
Q 026967 176 ACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 176 ~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
++++.+|...|+.++++|.+++.
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCC
Confidence 99999999888899999998765
No 136
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.31 E-value=2.7e-06 Score=77.50 Aligned_cols=130 Identities=12% Similarity=0.010 Sum_probs=94.7
Q ss_pred cceeeeeecccCCeeeE--EeecC--CCcceEEEECCCCCChh---hH--HHHHH---HHHHCCCeEEEeCCCCCCCCCC
Q 026967 71 SRRRTLSESLSNGKQDT--NILEN--IQYKKFVLIHGEGFGAW---CW--YKTVA---SLEEVGLIPTALDLKGSGIDLS 138 (230)
Q Consensus 71 ~~~~~~~~~~~~~~~~~--~~~~~--~~~~~vvliHG~~~~~~---~~--~~~~~---~L~~~G~~vi~~D~~G~G~S~~ 138 (230)
...+.+.+++.+|.+++ ++... ++.|+++..+-+..... .+ ..... .++.+||.|+..|.||.|.|++
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG 96 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEG 96 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCc
Confidence 45556778888887777 44444 44567777772222222 11 12333 5788899999999999999987
Q ss_pred CCCCCCC-HHHHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 139 DTNSVTT-LAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 139 ~~~~~~~-~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
......+ -.+...|+.+++.+... +.+|..+|.|++|+..+++|...|..+++++-+++...
T Consensus 97 ~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 97 VFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 5554444 44456678888887765 46999999999999999999998888999998888764
No 137
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.27 E-value=7.4e-06 Score=74.21 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=74.4
Q ss_pred CCcceEEEECCCCCChhhHHHHHH-----------H-------HHHCCCeEEEeCCC-CCCCCCCCCC-CCCCHHHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVA-----------S-------LEEVGLIPTALDLK-GSGIDLSDTN-SVTTLAEYSKP 152 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~-----------~-------L~~~G~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~ 152 (230)
...|+||+++|+.+.+..+..+.+ . ..+ -..++.+|.| |+|.|..... ...+.++.+++
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 346899999999887755422221 1 122 2678999975 8998864322 23456777888
Q ss_pred HHHHHHhcC----C--CCcEEEEEEchhHHHHHHHHHhC----------CcccceEEEeccccCCC
Q 026967 153 LLDYLENLL----E--DEKVILVGHSSGGACVSYALEHF----------PQKISKAIFLCATMVSD 202 (230)
Q Consensus 153 l~~~l~~l~----~--~~~v~lvGhS~Gg~~a~~~a~~~----------p~~v~~vv~i~~~~~~~ 202 (230)
+.++++.+. . ..+++|+|||+||.++..+|... .-.++++++.+++..+.
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 888887541 1 25999999999999887776542 12578899888887554
No 138
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.25 E-value=1.1e-05 Score=69.60 Aligned_cols=108 Identities=20% Similarity=0.240 Sum_probs=69.1
Q ss_pred CCcceEEEECCCCCChh-hHHHHHHHHHHCCC--eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCCcE
Q 026967 93 IQYKKFVLIHGEGFGAW-CWYKTVASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKV 166 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~-~~~~~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v 166 (230)
..+..+||+||+..+-+ .-+..++.+.+.|+ ..+.+-||..|.--.......+...-..++..+|..+ ....+|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 45678999999976544 45677777776664 5677889977643211111112222233444444443 223599
Q ss_pred EEEEEchhHHHHHHHHHh--------CCcccceEEEeccccC
Q 026967 167 ILVGHSSGGACVSYALEH--------FPQKISKAIFLCATMV 200 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~--------~p~~v~~vv~i~~~~~ 200 (230)
+|++||||.++++.+... .+.+|.-+|+-++-..
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 999999999998887643 2456888888877664
No 139
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.23 E-value=1e-05 Score=70.71 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=69.2
Q ss_pred CcceEEEECCCCCChhhHH-------HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcE
Q 026967 94 QYKKFVLIHGEGFGAWCWY-------KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKV 166 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~-------~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v 166 (230)
..|+||++||+|..-.... .+...|. ...+++.|+.-..........+..+.+.+.....+++..+.. +|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~-nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK-NI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC-eE
Confidence 4689999999987544321 2223333 368899997744311112233445666666666666555555 99
Q ss_pred EEEEEchhHHHHHHHHHhC--C---cccceEEEeccccCCC
Q 026967 167 ILVGHSSGGACVSYALEHF--P---QKISKAIFLCATMVSD 202 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~--p---~~v~~vv~i~~~~~~~ 202 (230)
+|+|-|.||.+++.+.... + ...+++|+|+||+...
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999987765431 1 2378999999997554
No 140
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.22 E-value=9.6e-05 Score=63.62 Aligned_cols=127 Identities=13% Similarity=0.181 Sum_probs=79.0
Q ss_pred ceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeCCCC--CCCCC----------C----CCCCC------------C
Q 026967 96 KKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKG--SGIDL----------S----DTNSV------------T 144 (230)
Q Consensus 96 ~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G--~G~S~----------~----~~~~~------------~ 144 (230)
-+||++||.+.+.+ ....+...|.+.||.++++.+|. ..... . ..... .
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 167 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAE 167 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhH
Confidence 38999999988764 34567788999999999998886 11000 0 00000 0
Q ss_pred CHHH-------HHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCc-ccceEEEeccccCCCCCChhhhhHHHHHh
Q 026967 145 TLAE-------YSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ-KISKAIFLCATMVSDGQRPFDVFAEEVCL 216 (230)
Q Consensus 145 ~~~~-------~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-~v~~vv~i~~~~~~~~~~~~~~~~~~~~~ 216 (230)
.... ....+.+++...+.. +++|+||..|++.++.+....+. .++++|+|++..+..... ..+.+.+..
T Consensus 168 ~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n--~~l~~~la~ 244 (310)
T PF12048_consen 168 AREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRN--PALAEQLAQ 244 (310)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhh--hhHHHHhhc
Confidence 1112 222333333333333 69999999999999998877654 599999999997654331 123333333
Q ss_pred hhcCCccccc
Q 026967 217 MLNAPLISLV 226 (230)
Q Consensus 217 ~l~~p~~~~v 226 (230)
+..|.+++.
T Consensus 245 -l~iPvLDi~ 253 (310)
T PF12048_consen 245 -LKIPVLDIY 253 (310)
T ss_pred -cCCCEEEEe
Confidence 556776653
No 141
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.21 E-value=1.1e-05 Score=66.27 Aligned_cols=103 Identities=25% Similarity=0.314 Sum_probs=69.5
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCC-----CeEEEeCCCCC----CCCCC-------------CCCCCCCHHHHHHHHH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVG-----LIPTALDLKGS----GIDLS-------------DTNSVTTLAEYSKPLL 154 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G-----~~vi~~D~~G~----G~S~~-------------~~~~~~~~~~~~~~l~ 154 (230)
|.||+||.++++.+...++..|...+ --++.+|--|. |.=+. ........+.|.+.+.
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 78999999999999999999998764 12555666652 11110 1112223344444444
Q ss_pred HHHH-hcCCCCcEEEEEEchhHHHHHHHHHhCCc-----ccceEEEeccccC
Q 026967 155 DYLE-NLLEDEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMV 200 (230)
Q Consensus 155 ~~l~-~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~vv~i~~~~~ 200 (230)
..|. +.+.+ ++.+|||||||....+++..+.. .+.++|+++++..
T Consensus 127 syL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4443 33455 99999999999998888876422 3899999998865
No 142
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.21 E-value=3.8e-06 Score=70.48 Aligned_cols=103 Identities=19% Similarity=0.151 Sum_probs=64.9
Q ss_pred ceEEEECCCCCChhhHHH--------HHHHHHHCCCeEEEeCCCC-CCCCCCCCCCCCCHHHHHHHHHHHH-HhcCCC-C
Q 026967 96 KKFVLIHGEGFGAWCWYK--------TVASLEEVGLIPTALDLKG-SGIDLSDTNSVTTLAEYSKPLLDYL-ENLLED-E 164 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~--------~~~~L~~~G~~vi~~D~~G-~G~S~~~~~~~~~~~~~~~~l~~~l-~~l~~~-~ 164 (230)
|.+||+||.|.....-+. ++....+.++-|++|.+-- +-.++ ......+....+.+.+.+ ++.+++ .
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e--~~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE--EKTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccc--cccchhHHHHHHHHHHHHhhccCcccc
Confidence 789999999876554222 2223333456677776321 11111 111222333344444333 334443 6
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+|+++|.|+||+.++.++.++|+.+++.+.+++-..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 999999999999999999999999999999988754
No 143
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.20 E-value=3.2e-06 Score=77.06 Aligned_cols=108 Identities=23% Similarity=0.234 Sum_probs=64.9
Q ss_pred CCcceEEEECCCCCChhh--HHHHHHHHHHC--CCeEEEeCCC-C---CCCCCC-CCCCCCCHHHH---HHHHHHHHHhc
Q 026967 93 IQYKKFVLIHGEGFGAWC--WYKTVASLEEV--GLIPTALDLK-G---SGIDLS-DTNSVTTLAEY---SKPLLDYLENL 160 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~--~~~~~~~L~~~--G~~vi~~D~~-G---~G~S~~-~~~~~~~~~~~---~~~l~~~l~~l 160 (230)
...|+||++||++..... .. ....|... |+.|+.+++| | +..... .......+.|. .+.+.+.++.+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 346899999998543221 11 22333333 3899999999 3 222211 11111223333 33444444555
Q ss_pred CC-CCcEEEEEEchhHHHHHHHHHh--CCcccceEEEeccccCC
Q 026967 161 LE-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVS 201 (230)
Q Consensus 161 ~~-~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~vv~i~~~~~~ 201 (230)
+. ..+|+|+|+|.||.++..++.. .+..++++|+.++....
T Consensus 172 ggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 172 GGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 44 3699999999999998887764 23469999999887643
No 144
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.20 E-value=1.7e-05 Score=71.32 Aligned_cols=108 Identities=20% Similarity=0.193 Sum_probs=70.0
Q ss_pred CCcceEEEECCCCCChhh-H--HHHHHHHH-HCCCeEEEeCCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHhcC-
Q 026967 93 IQYKKFVLIHGEGFGAWC-W--YKTVASLE-EVGLIPTALDLKGSGIDLS------DTNSVTTLAEYSKPLLDYLENLL- 161 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~-~--~~~~~~L~-~~G~~vi~~D~~G~G~S~~------~~~~~~~~~~~~~~l~~~l~~l~- 161 (230)
+++|++|++-|- +.... | ..++..|+ +.|-.++++.+|-+|.|.. +.-...+.++.+.|+..+++++.
T Consensus 27 ~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 27 PGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 346666666554 44432 2 23444444 4578899999999999962 11234578888999999987764
Q ss_pred -----CCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 162 -----EDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 162 -----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
.+.|++++|-|+||.++.++-.+||+.|.+.+.-++++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 2358999999999999999999999999999998888754
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.19 E-value=1e-05 Score=69.23 Aligned_cols=90 Identities=19% Similarity=0.168 Sum_probs=63.5
Q ss_pred CCCcceEEEECCCCCChhhH-------HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---
Q 026967 92 NIQYKKFVLIHGEGFGAWCW-------YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL--- 161 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~-------~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~--- 161 (230)
....+-||+.-|.++.-+.. ..+.+.....|.+|+.+++||.|.|.+... .++.+.+-.+.++.+.
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s----~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS----RKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCC----HHHHHHHHHHHHHHHHhcc
Confidence 34567899999988766651 235555566789999999999999976443 3444444444444332
Q ss_pred --C-CCcEEEEEEchhHHHHHHHHHhC
Q 026967 162 --E-DEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 162 --~-~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
+ .+.+++.|||+||.++..++..+
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhc
Confidence 1 25899999999999988877664
No 146
>PRK04940 hypothetical protein; Provisional
Probab=98.16 E-value=8.2e-06 Score=64.32 Aligned_cols=87 Identities=13% Similarity=0.148 Sum_probs=52.9
Q ss_pred EEEECCCCCChhh--HHH-HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC---CCCcEEEEEE
Q 026967 98 FVLIHGEGFGAWC--WYK-TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL---EDEKVILVGH 171 (230)
Q Consensus 98 vvliHG~~~~~~~--~~~-~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvGh 171 (230)
||++||+.++..+ ... ....+ .-+++++ +++ .....+....+.+.+..+. ..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999988876 421 11222 1123333 222 1122333344444544321 1147999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
|+||+.|.+++.++. + +.|+|+|.+.+
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 999999999999875 4 56778888754
No 147
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.16 E-value=9.9e-06 Score=64.20 Aligned_cols=98 Identities=15% Similarity=0.217 Sum_probs=72.2
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEEEEEEc
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVILVGHS 172 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvGhS 172 (230)
..+||+-|=++-...=..+++.|+++|+.|+.+|-.-+=.+ ..+.++.+.|+.+++++... .++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 35788888766554445789999999999999996643322 23456667777777765421 2599999999
Q ss_pred hhHHHHHHHHHhCCc----ccceEEEecccc
Q 026967 173 SGGACVSYALEHFPQ----KISKAIFLCATM 199 (230)
Q Consensus 173 ~Gg~~a~~~a~~~p~----~v~~vv~i~~~~ 199 (230)
+|+-+...+..+.|+ +|..++++++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 999988888777764 688899988764
No 148
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.12 E-value=6.9e-06 Score=73.35 Aligned_cols=126 Identities=24% Similarity=0.263 Sum_probs=77.2
Q ss_pred CcceEEEECCCCCCh----hhHHHHHHHHHHCC-CeEEEeCCCC--CCCC---CCC----CCCCCCHHHH---HHHHHHH
Q 026967 94 QYKKFVLIHGEGFGA----WCWYKTVASLEEVG-LIPTALDLKG--SGID---LSD----TNSVTTLAEY---SKPLLDY 156 (230)
Q Consensus 94 ~~~~vvliHG~~~~~----~~~~~~~~~L~~~G-~~vi~~D~~G--~G~S---~~~----~~~~~~~~~~---~~~l~~~ 156 (230)
+.|+||+|||++... +.++ --..|+++| +-|+.+|+|= .|.- ... ......+.|. ++.+.+-
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~y-dgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLY-DGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCcEEEEEeccccccCCCccccc-ChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 458999999985432 2222 234677777 9999999882 1211 110 0011233443 4566677
Q ss_pred HHhcCCC-CcEEEEEEchhHHHHHHHHHhCCc---ccceEEEeccccCC-CCCChhhhhHHHHHhhhcCC
Q 026967 157 LENLLED-EKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVS-DGQRPFDVFAEEVCLMLNAP 221 (230)
Q Consensus 157 l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~~~-~~~~~~~~~~~~~~~~l~~p 221 (230)
+++++.+ +.|.|+|+|.|++.++.++.. |. .++++|+.|+.... .+..........+...+..+
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~~~~s~~~A~~~a~~f~~~lG~~ 240 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAASRVTSREEAREKAAAFARALGIP 240 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCCccCcHHHHHHHHHHHHHHhCCC
Confidence 7777754 799999999999987777653 43 58899999888752 23333344444444444444
No 149
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.12 E-value=8e-05 Score=61.09 Aligned_cols=115 Identities=14% Similarity=0.041 Sum_probs=66.4
Q ss_pred ccCCeeeEEeecC------CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCCCCCCHHHHHHH
Q 026967 80 LSNGKQDTNILEN------IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTTLAEYSKP 152 (230)
Q Consensus 80 ~~~~~~~~~~~~~------~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~ 152 (230)
..++.++.+|... ...++||+..|++...+.|.+++++|+.+||.|+.+|.--| |.|++. ....++.....+
T Consensus 9 ~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~-I~eftms~g~~s 87 (294)
T PF02273_consen 9 LEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD-INEFTMSIGKAS 87 (294)
T ss_dssp ETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHH
T ss_pred cCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC-hhhcchHHhHHH
Confidence 4456666655422 23468999999999999999999999999999999998765 888753 344566666555
Q ss_pred HHHHHHh---cCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 153 LLDYLEN---LLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 153 l~~~l~~---l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
+..+++. .+.. ++.|+.-|+-|-+|+..|.+ + .+.-+|..-+-
T Consensus 88 L~~V~dwl~~~g~~-~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGV 133 (294)
T PF02273_consen 88 LLTVIDWLATRGIR-RIGLIAASLSARIAYEVAAD-I-NLSFLITAVGV 133 (294)
T ss_dssp HHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--
T ss_pred HHHHHHHHHhcCCC-cchhhhhhhhHHHHHHHhhc-c-CcceEEEEeee
Confidence 5555544 4555 89999999999999999984 3 46666655443
No 150
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.06 E-value=2e-05 Score=69.91 Aligned_cols=86 Identities=27% Similarity=0.414 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHCCCeE-----EE-eCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHH
Q 026967 110 CWYKTVASLEEVGLIP-----TA-LDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYA 181 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~v-----i~-~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~ 181 (230)
.|..+++.|.+.||.. .+ +|+| .... ...++...+...++.... .++|+||||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR------~~~~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR------LSPA---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh------hchh---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 7899999999988752 22 5777 1111 344555555555554321 4699999999999999998
Q ss_pred HHhCCc------ccceEEEeccccCCCCC
Q 026967 182 LEHFPQ------KISKAIFLCATMVSDGQ 204 (230)
Q Consensus 182 a~~~p~------~v~~vv~i~~~~~~~~~ 204 (230)
....+. .|+++|.++++......
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCChH
Confidence 877643 49999999998765433
No 151
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=0.00015 Score=59.67 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=81.2
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHC-C--CeEEEeCCCCCCCCC--------CCCCCCCCHHHHHHHHHHHHHhc
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEV-G--LIPTALDLKGSGIDL--------SDTNSVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~-G--~~vi~~D~~G~G~S~--------~~~~~~~~~~~~~~~l~~~l~~l 160 (230)
...++.|+++.|.++....|..++.+|..+ + +.++.+-..||-.-. .......++++.++.-.++++..
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 345678999999999999998888877654 2 558888877775322 11235678899999999999765
Q ss_pred -CCCCcEEEEEEchhHHHHHHHHHhCC--cccceEEEecccc
Q 026967 161 -LEDEKVILVGHSSGGACVSYALEHFP--QKISKAIFLCATM 199 (230)
Q Consensus 161 -~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~vv~i~~~~ 199 (230)
..+.+++++|||.|+++.+++..... -.|.+++++-|..
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 44679999999999999999986322 2477888876664
No 152
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.02 E-value=5.4e-05 Score=61.52 Aligned_cols=106 Identities=21% Similarity=0.198 Sum_probs=56.0
Q ss_pred CcceEEEECCCCCChhhHHH----HHHHHHHCCCeEEEeCCCC-----CCCC------------------CCCC----CC
Q 026967 94 QYKKFVLIHGEGFGAWCWYK----TVASLEEVGLIPTALDLKG-----SGID------------------LSDT----NS 142 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~----~~~~L~~~G~~vi~~D~~G-----~G~S------------------~~~~----~~ 142 (230)
.++.||++||++.++..|.. +...|.+.++..+.+|-|- -|.. +... ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 45789999999999998875 4556666369999888552 1111 0001 11
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC--------CcccceEEEeccccCC
Q 026967 143 VTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF--------PQKISKAIFLCATMVS 201 (230)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~--------p~~v~~vv~i~~~~~~ 201 (230)
...+++..+.+.++++..+. -..|+|+|.||.+|..++... ...++.+|+++++.+.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 34556667777777777653 247999999999987776431 2247899999998764
No 153
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.01 E-value=1.9e-05 Score=72.31 Aligned_cols=105 Identities=18% Similarity=0.177 Sum_probs=76.7
Q ss_pred CCcceEEEECCCCCChh---hHH--H--HHHHHHHCCCeEEEeCCCCCCCCC-------CCCCCCCCHHHHHHHHHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAW---CWY--K--TVASLEEVGLIPTALDLKGSGIDL-------SDTNSVTTLAEYSKPLLDYLE 158 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~---~~~--~--~~~~L~~~G~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~ 158 (230)
++-|+++++=|+.+-.- .|. . -...|+..||-|+.+|-||+-.-. ........++|.++-+.-+.+
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Lae 719 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAE 719 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHH
Confidence 34679999999866322 232 2 235788899999999999974321 123345577888888888888
Q ss_pred hcCC-C-CcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 159 NLLE-D-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 159 ~l~~-~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
..+. + .+|.|-|||+||++++....++|+-++..|.-+|
T Consensus 720 q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap 760 (867)
T KOG2281|consen 720 QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP 760 (867)
T ss_pred hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc
Confidence 7742 2 5999999999999999999999987776665444
No 154
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.99 E-value=3e-05 Score=61.97 Aligned_cols=106 Identities=14% Similarity=0.211 Sum_probs=76.4
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCC-----------------CCCCCCCCCHHHHHHHHHHHH
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGID-----------------LSDTNSVTTLAEYSKPLLDYL 157 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S-----------------~~~~~~~~~~~~~~~~l~~~l 157 (230)
..+||++||.+.+...|.++++.|.-.....|+|.-|-.-.+ ..-......+...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 358999999999999998888888777788888865532111 000112234445555666666
Q ss_pred Hhc---CC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 158 ENL---LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 158 ~~l---~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
++. ++ ..+|.+-|+|+||.++++.+..+|..+.+++..+++.+
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 553 21 25899999999999999999999888888888888765
No 155
>PLN02606 palmitoyl-protein thioesterase
Probab=97.95 E-value=0.00013 Score=61.98 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=71.4
Q ss_pred cceEEEECCCC--CChhhHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEE
Q 026967 95 YKKFVLIHGEG--FGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVG 170 (230)
Q Consensus 95 ~~~vvliHG~~--~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvG 170 (230)
..|||++||++ .+...+..+.+.+.+. |+.+.++- -|.+.. ......+.+.++.+.+.+..... ..-+.++|
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIG 101 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQMKELSEGYNIVA 101 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcchhhcCceEEEE
Confidence 35899999998 4445777788888633 67666655 232221 11224556666666666655322 24799999
Q ss_pred EchhHHHHHHHHHhCCc--ccceEEEeccccCC
Q 026967 171 HSSGGACVSYALEHFPQ--KISKAIFLCATMVS 201 (230)
Q Consensus 171 hS~Gg~~a~~~a~~~p~--~v~~vv~i~~~~~~ 201 (230)
+|.||.++-.+++++|+ .|+.+|.++++...
T Consensus 102 fSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 102 ESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 99999999999999876 59999999988544
No 156
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=4.8e-05 Score=72.78 Aligned_cols=105 Identities=18% Similarity=0.173 Sum_probs=75.5
Q ss_pred CcceEEEECCCCCChh-------hHHHHHHHHHHCCCeEEEeCCCCCCCCCC-------CCCCCCCHHHHHHHHHHHHHh
Q 026967 94 QYKKFVLIHGEGFGAW-------CWYKTVASLEEVGLIPTALDLKGSGIDLS-------DTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~-------~~~~~~~~L~~~G~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~~l~~~l~~ 159 (230)
+-|.+|.+||+.++.. .|... .....|+.|+.+|.||.|.... ..-......|....+..+++.
T Consensus 525 kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 525 KYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 3467888899876322 23322 5667899999999999875431 122345677777777777777
Q ss_pred cCCC-CcEEEEEEchhHHHHHHHHHhCCcccc-eEEEeccccC
Q 026967 160 LLED-EKVILVGHSSGGACVSYALEHFPQKIS-KAIFLCATMV 200 (230)
Q Consensus 160 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~-~vv~i~~~~~ 200 (230)
...+ ++|.|.|+|.||++++.++...|+.+- ..|.++|...
T Consensus 603 ~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 603 PFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred ccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 6554 699999999999999999998875544 4488877643
No 157
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.94 E-value=1.7e-05 Score=69.68 Aligned_cols=112 Identities=16% Similarity=0.211 Sum_probs=81.3
Q ss_pred CcceEEEECCCCCChhhH-----HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHhc---CCCC
Q 026967 94 QYKKFVLIHGEGFGAWCW-----YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-KPLLDYLENL---LEDE 164 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~-----~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~~l~~l---~~~~ 164 (230)
.+++++++|-+-.....| ..++..|.++|+.|+.+++.+=..+.. ..++++++ ..+.+.++.. ...+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 356899999886554443 258899999999999999986554432 34666666 4444444332 2334
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcc-cceEEEeccccCCCCCChhhh
Q 026967 165 KVILVGHSSGGACVSYALEHFPQK-ISKAIFLCATMVSDGQRPFDV 209 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~-v~~vv~i~~~~~~~~~~~~~~ 209 (230)
+|.++|||.||+++..++..++.+ |+.++++.++.+.........
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~i 227 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGI 227 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcccccccc
Confidence 999999999999999988888887 999999988876655444333
No 158
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.91 E-value=4.5e-05 Score=61.63 Aligned_cols=104 Identities=26% Similarity=0.238 Sum_probs=75.3
Q ss_pred cceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEEE
Q 026967 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVIL 168 (230)
Q Consensus 95 ~~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~l 168 (230)
+-.|||+-|++..-- .-..+...|-+.+|..+-+.++.+- ..-...++.+.++|+..+++++.. ..+|++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 347899999876432 3457888999999999999877321 112234678888999999998754 359999
Q ss_pred EEEchhHHHHHHHHH--hCCcccceEEEeccccCCC
Q 026967 169 VGHSSGGACVSYALE--HFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 169 vGhS~Gg~~a~~~a~--~~p~~v~~vv~i~~~~~~~ 202 (230)
+|||-|..-.++++. ..+..+.+.|+.+|....+
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999998887773 2455677888777765443
No 159
>COG3150 Predicted esterase [General function prediction only]
Probab=97.90 E-value=8.4e-05 Score=57.48 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=62.0
Q ss_pred EEEECCCCCChhhHHH--HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 98 FVLIHGEGFGAWCWYK--TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 98 vvliHG~~~~~~~~~~--~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
||++||+.++..+... +.+.+... .|-.+.+. +.......+.++.+..++...+.. ...|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~--p~l~h~p~~a~~ele~~i~~~~~~-~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYST--PHLPHDPQQALKELEKAVQELGDE-SPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeec--CCCCCCHHHHHHHHHHHHHHcCCC-CceEEeecchH
Confidence 8999999998887654 33344443 22222222 233346788889999999998876 79999999999
Q ss_pred HHHHHHHHhCCcccceEEEecccc
Q 026967 176 ACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 176 ~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+.+.+++.++- +++++ ++|.+
T Consensus 71 Y~At~l~~~~G--irav~-~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--IRAVV-FNPAV 91 (191)
T ss_pred HHHHHHHHHhC--Chhhh-cCCCc
Confidence 99999999864 55544 45554
No 160
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.83 E-value=2.4e-05 Score=65.71 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=57.2
Q ss_pred CcceEEEECCCCCCh---hhHHHHHHHHHHC--CCeEEEeCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCC-CCcE
Q 026967 94 QYKKFVLIHGEGFGA---WCWYKTVASLEEV--GLIPTALDLKGSGID-LSDTNSVTTLAEYSKPLLDYLENLLE-DEKV 166 (230)
Q Consensus 94 ~~~~vvliHG~~~~~---~~~~~~~~~L~~~--G~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v 166 (230)
...+||+.||+|.+. ..+..+.+.+.+. |..|.+++.- .+.+ +..........+.++.+.+.+..... ..-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 345899999998754 3455555555443 6777777753 2211 00001112445556666666655332 2479
Q ss_pred EEEEEchhHHHHHHHHHhCCc-ccceEEEeccccC
Q 026967 167 ILVGHSSGGACVSYALEHFPQ-KISKAIFLCATMV 200 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~-~v~~vv~i~~~~~ 200 (230)
.++|+|.||.++-.++.+++. .|+.+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999864 6999999998853
No 161
>COG0627 Predicted esterase [General function prediction only]
Probab=97.81 E-value=8e-05 Score=64.09 Aligned_cols=108 Identities=17% Similarity=0.166 Sum_probs=72.4
Q ss_pred cceEEEECCCCCChhhH---HHHHHHHHHCCCeEEEeCCC--------------CCCCCCC-C-----C-CCCCCHHHH-
Q 026967 95 YKKFVLIHGEGFGAWCW---YKTVASLEEVGLIPTALDLK--------------GSGIDLS-D-----T-NSVTTLAEY- 149 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~---~~~~~~L~~~G~~vi~~D~~--------------G~G~S~~-~-----~-~~~~~~~~~- 149 (230)
-|+++++||...+...| ..+-+.....|+.++++|-. |.+.|-. + . ...+.++++
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 45777888887665433 34556666778888887432 3333310 0 0 112556555
Q ss_pred HHHHHHHHH-hcCCCC---cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 150 SKPLLDYLE-NLLEDE---KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 150 ~~~l~~~l~-~l~~~~---~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
.+++-+.++ ++.... +..++||||||+-|+.+|.++|+++..+..+++.+.+.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 346664554 444332 78999999999999999999999999999999987765
No 162
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.81 E-value=8.8e-05 Score=67.84 Aligned_cols=107 Identities=24% Similarity=0.232 Sum_probs=61.4
Q ss_pred cceEEEECCCCCChh----hHHHHHHHHHHCCCeEEEeCCC----CCCCCCC-CCC-CCCCHHHHH---HHHHHHHHhcC
Q 026967 95 YKKFVLIHGEGFGAW----CWYKTVASLEEVGLIPTALDLK----GSGIDLS-DTN-SVTTLAEYS---KPLLDYLENLL 161 (230)
Q Consensus 95 ~~~vvliHG~~~~~~----~~~~~~~~L~~~G~~vi~~D~~----G~G~S~~-~~~-~~~~~~~~~---~~l~~~l~~l~ 161 (230)
-|++|+|||+++... ..+.-...+...++-|+.+++| |+-.+.. ... .-..+.|.. +.+.+-+.+++
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG 204 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG 204 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc
Confidence 589999999865321 2333444556678999999998 2221111 111 223344443 44445555565
Q ss_pred CC-CcEEEEEEchhHHHHHHHHHh--CCcccceEEEeccccCC
Q 026967 162 ED-EKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMVS 201 (230)
Q Consensus 162 ~~-~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~vv~i~~~~~~ 201 (230)
.+ ++|+|+|||.||..+...+.. -...++++|+.++....
T Consensus 205 GDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 205 GDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred cCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 43 699999999999987666544 23479999999996543
No 163
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.80 E-value=0.00032 Score=59.70 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=70.0
Q ss_pred cceEEEECCCCCChh--hHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEE
Q 026967 95 YKKFVLIHGEGFGAW--CWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVG 170 (230)
Q Consensus 95 ~~~vvliHG~~~~~~--~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvG 170 (230)
..++|+.||+|.+.. ....+.+.+... |..+.++.. |-+ . .......+.+.++.+.+.+..... ..-+.++|
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~--~-~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG--V-GDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC--c-cccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 458999999987654 445566666443 677776653 222 1 122334556666666666655322 24799999
Q ss_pred EchhHHHHHHHHHhCCc--ccceEEEecccc
Q 026967 171 HSSGGACVSYALEHFPQ--KISKAIFLCATM 199 (230)
Q Consensus 171 hS~Gg~~a~~~a~~~p~--~v~~vv~i~~~~ 199 (230)
||.||.++-.+++++|+ .|+.+|.++++.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999886 599999999885
No 164
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.71 E-value=0.00044 Score=59.79 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=71.9
Q ss_pred CCcceEEEECCCCCChhhHH-HH-HHHHHHCCCeEEEeCCCCCCCCCCCCC---CCCCHHHH----------HHHHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWCWY-KT-VASLEEVGLIPTALDLKGSGIDLSDTN---SVTTLAEY----------SKPLLDYL 157 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~-~~-~~~L~~~G~~vi~~D~~G~G~S~~~~~---~~~~~~~~----------~~~l~~~l 157 (230)
+.+|.+|.+.|-|+.....+ .+ +..|.+.|+..+.+..|-||.-..... ...+..|. +..+..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 45778888898877443322 23 677777799999999999986432111 11122221 23444555
Q ss_pred HhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 158 ENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 158 ~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+..+.. ++.+.|.||||.+|..++...|..+..+-++++..
T Consensus 170 ~~~G~~-~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~s 210 (348)
T PF09752_consen 170 EREGYG-PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSS 210 (348)
T ss_pred HhcCCC-ceEEEEechhHhhHHhhhhcCCCceeEEEeecccC
Confidence 555556 99999999999999999999998777666665543
No 165
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.69 E-value=0.0002 Score=57.95 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=71.2
Q ss_pred eeeEEeecCCCcceEEEECCC-CCChhhHHHHHHHHHHCCCeEEEeCCC-CCCCCCC-C---------CCCCCCHHHHHH
Q 026967 84 KQDTNILENIQYKKFVLIHGE-GFGAWCWYKTVASLEEVGLIPTALDLK-GSGIDLS-D---------TNSVTTLAEYSK 151 (230)
Q Consensus 84 ~~~~~~~~~~~~~~vvliHG~-~~~~~~~~~~~~~L~~~G~~vi~~D~~-G~G~S~~-~---------~~~~~~~~~~~~ 151 (230)
...|+.-...++..||++--+ |.....-...++.++.+||.|+.||+- |--.+.. + .....-......
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~ 107 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDIT 107 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHH
Confidence 333333344444577777665 444445778899999999999999965 4111211 0 011112223344
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.+..+|+.-+...+|.++|++|||-++..+....| .+.++|..-|..
T Consensus 108 ~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~ 154 (242)
T KOG3043|consen 108 AVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF 154 (242)
T ss_pred HHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc
Confidence 45555554454579999999999999888877766 577777665554
No 166
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.57 E-value=0.00069 Score=57.80 Aligned_cols=82 Identities=23% Similarity=0.146 Sum_probs=49.2
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc----C--CCCcEEEEEEchhHHHHHHHHHhC-
Q 026967 113 KTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL----L--EDEKVILVGHSSGGACVSYALEHF- 185 (230)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~--~~~~v~lvGhS~Gg~~a~~~a~~~- 185 (230)
.++..+.++||.|+++|+.|.|... ....+....+-|......++ + .+.++.++|||.||..++.+++..
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y---~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~ 93 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPY---LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAP 93 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcc---cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhH
Confidence 3556666789999999999999621 11111222222222222222 2 246899999999999988877543
Q ss_pred ---Ccc---cceEEEecc
Q 026967 186 ---PQK---ISKAIFLCA 197 (230)
Q Consensus 186 ---p~~---v~~vv~i~~ 197 (230)
|+. +.+.+..++
T Consensus 94 ~YApeL~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 94 SYAPELNRDLVGAAAGGP 111 (290)
T ss_pred HhCcccccceeEEeccCC
Confidence 432 555555444
No 167
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.002 Score=51.95 Aligned_cols=107 Identities=23% Similarity=0.233 Sum_probs=65.3
Q ss_pred CcceEEEECCCCCC-hhhHHH---------------HHHHHHHCCCeEEEeCCCC---CCCCCCCCCCCCCHHHHHHHHH
Q 026967 94 QYKKFVLIHGEGFG-AWCWYK---------------TVASLEEVGLIPTALDLKG---SGIDLSDTNSVTTLAEYSKPLL 154 (230)
Q Consensus 94 ~~~~vvliHG~~~~-~~~~~~---------------~~~~L~~~G~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~l~ 154 (230)
....+|+|||-|.- +..|.. +++...+.||-|+..+.-- +-.+. .+....+..-+....
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k--~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKK--RNPQKYIRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcc--cCcchhccchHHHHH
Confidence 34589999998753 334532 3444556799999987331 11111 111112222233333
Q ss_pred HHHHhc---CCCCcEEEEEEchhHHHHHHHHHhCCc--ccceEEEeccccCCC
Q 026967 155 DYLENL---LEDEKVILVGHSSGGACVSYALEHFPQ--KISKAIFLCATMVSD 202 (230)
Q Consensus 155 ~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~vv~i~~~~~~~ 202 (230)
.+..++ ...+.|++|.||.||...+.+..++|+ +|.++.+.++.+..+
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p 230 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSP 230 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCc
Confidence 333332 123589999999999999999999885 577777777775443
No 168
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.50 E-value=0.0014 Score=54.55 Aligned_cols=101 Identities=22% Similarity=0.266 Sum_probs=71.9
Q ss_pred ceEEEECCCCCChhh--HHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEEE
Q 026967 96 KKFVLIHGEGFGAWC--WYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVILVGH 171 (230)
Q Consensus 96 ~~vvliHG~~~~~~~--~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGh 171 (230)
.++|++||++..... +..+.+.+.+. |..|++.|. |-|. .......+.+.++.+.+.+..... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 589999999887765 66677777765 788888884 2331 112233556666666666654332 368999999
Q ss_pred chhHHHHHHHHHhCCc-ccceEEEeccccC
Q 026967 172 SSGGACVSYALEHFPQ-KISKAIFLCATMV 200 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~-~v~~vv~i~~~~~ 200 (230)
|.||.++-.++...++ .|...|.++++..
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999887654 5888888888753
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.49 E-value=0.0014 Score=61.63 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=61.4
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHH----------------HCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLE----------------EVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL 157 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~----------------~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l 157 (230)
++-+|+|++|..++...-+.++.... ...|+..++|+=+- ........+.+.++-+.+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHHH
Confidence 35589999999777655444443322 11255666665420 01122335566555555555
Q ss_pred Hhc----CC--------CCcEEEEEEchhHHHHHHHHHh---CCcccceEEEeccccCC
Q 026967 158 ENL----LE--------DEKVILVGHSSGGACVSYALEH---FPQKISKAIFLCATMVS 201 (230)
Q Consensus 158 ~~l----~~--------~~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~vv~i~~~~~~ 201 (230)
+.+ .. ...|++|||||||.+|..++.. .+..|.-++..+++...
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a 222 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAA 222 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccC
Confidence 432 11 2469999999999998877653 23457777777776543
No 170
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.49 E-value=0.00024 Score=65.23 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHh---cCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 110 CWYKTVASLEEVGLIPTALDLKGSGIDLSDT-NSVTTLAEYSKPLLDYLEN---LLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
.|..+++.|++.||. -.|+.|........ .......++...+..+++. +...+||+|+||||||.+++++....
T Consensus 157 vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 157 VWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred eHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 468999999999997 45666555544211 1122334554555555553 34346999999999999999876532
Q ss_pred C---------------cccceEEEeccccCCCC
Q 026967 186 P---------------QKISKAIFLCATMVSDG 203 (230)
Q Consensus 186 p---------------~~v~~vv~i~~~~~~~~ 203 (230)
. ..|+++|.++++.....
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~ 267 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVP 267 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCCcH
Confidence 1 13889999999876543
No 171
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.44 E-value=0.0006 Score=59.86 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=74.5
Q ss_pred ceEEEECCCCCChhhHHH---HH-HHHHHCCCeEEEeCCCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHhcCC
Q 026967 96 KKFVLIHGEGFGAWCWYK---TV-ASLEEVGLIPTALDLKGSGIDLSDT---------NSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~---~~-~~L~~~G~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
-+|+|.-|..++-+.|.. ++ +.-.+.+--++.+.+|-+|+|-.-. -...+.++...|-..++.+++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 688999999888776642 33 3333446678899999999884211 1222445666666666666543
Q ss_pred -----CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 163 -----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 163 -----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
..+|+.+|-|+||+++.++=.+||+.+.+.+.-++++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 2699999999999999999999999888877766664
No 172
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.27 E-value=0.00084 Score=51.44 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcC---CCCcEEEEEEchhHHHHHHHHHhCCc----ccceEEEeccccCC
Q 026967 149 YSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALEHFPQ----KISKAIFLCATMVS 201 (230)
Q Consensus 149 ~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~~p~----~v~~vv~i~~~~~~ 201 (230)
....+...++... ...+++++|||+||.+|..++..... .+..++.++++...
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3344444444432 34599999999999999998877644 56677777777654
No 173
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.23 E-value=0.0071 Score=47.77 Aligned_cols=55 Identities=20% Similarity=0.323 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhcCC----CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 146 LAEYSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 146 ~~~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
-+.-+.+|..|++.|.. +.++.++|||+|+.++-.++...+..++.+|+++++-.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 34556777888876643 35899999999999999998876778999999987654
No 174
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.22 E-value=0.00041 Score=61.79 Aligned_cols=86 Identities=24% Similarity=0.397 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHCCCe------EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCcEEEEEEchhHHHHH
Q 026967 109 WCWYKTVASLEEVGLI------PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN---LLEDEKVILVGHSSGGACVS 179 (230)
Q Consensus 109 ~~~~~~~~~L~~~G~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGhS~Gg~~a~ 179 (230)
+.|..+++.|..-||. -..+|+|= | .......+++...+...++. +...+||+|++||||+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s---~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---S---YHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---c---cCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5788999999988886 33457661 1 12223444555555555543 44446999999999999999
Q ss_pred HHHHhCCc--------ccceEEEeccccC
Q 026967 180 YALEHFPQ--------KISKAIFLCATMV 200 (230)
Q Consensus 180 ~~a~~~p~--------~v~~vv~i~~~~~ 200 (230)
+.+..+++ -|+++|.++++..
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhc
Confidence 99988776 2667777766653
No 175
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.21 E-value=0.0055 Score=54.37 Aligned_cols=108 Identities=12% Similarity=0.101 Sum_probs=69.6
Q ss_pred CCcceEEEECCCCCChhhHHHHHHH-------------------HHHCCCeEEEeCCC-CCCCCCCCCC--CCCCHHHHH
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVAS-------------------LEEVGLIPTALDLK-GSGIDLSDTN--SVTTLAEYS 150 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~-------------------L~~~G~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~ 150 (230)
...|.||++.|+++++..|..+.+. ..+ -..++.+|.| |.|.|..... ...+.++.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEeecCceEEeeccccccccchhhHHH
Confidence 4568899999998877766433321 112 2679999955 9999974333 234778888
Q ss_pred HHHHHHHHhcC------CCCcEEEEEEchhHHHHHHHHHh----C------CcccceEEEeccccCC
Q 026967 151 KPLLDYLENLL------EDEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATMVS 201 (230)
Q Consensus 151 ~~l~~~l~~l~------~~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~vv~i~~~~~~ 201 (230)
+++.++|..+- ...+++|.|-|+||..+..+|.. . +-.++++++.++++.+
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 88888887651 12499999999999976665532 3 3458899999998754
No 176
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.16 E-value=0.00063 Score=54.74 Aligned_cols=106 Identities=22% Similarity=0.168 Sum_probs=67.8
Q ss_pred cceEEEECCCCCChhhHH---HHHHHHHHCCCeEEEeCC--CCC---CCCCC-CC---------------CCCCCHHHH-
Q 026967 95 YKKFVLIHGEGFGAWCWY---KTVASLEEVGLIPTALDL--KGS---GIDLS-DT---------------NSVTTLAEY- 149 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~---~~~~~L~~~G~~vi~~D~--~G~---G~S~~-~~---------------~~~~~~~~~- 149 (230)
-|++.++-|+....+.|- .+-+.-.++|+.|+.||- ||. |.++. +- ...+.+-++
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 568899999987777653 355667788999999994 442 22110 00 011222222
Q ss_pred HHHHHHHHHhc--CC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 150 SKPLLDYLENL--LE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 150 ~~~l~~~l~~l--~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
.+++.+++..- .. ..++.|.||||||.-|+..+.++|.+.+.+-..+|...
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 34555555421 11 15899999999999999988888888777766666543
No 177
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.14 E-value=0.0038 Score=56.08 Aligned_cols=110 Identities=17% Similarity=0.209 Sum_probs=84.1
Q ss_pred CCCcceEEEECCCCCChhhHH-----HHHHHHHHCCCeEEEeCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHhc
Q 026967 92 NIQYKKFVLIHGEGFGAWCWY-----KTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~-----~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l 160 (230)
.+++|..++|-|-|.-...|- .+.....+.|-.|+...+|-+|.|..-.. ...+..+...|+.++++.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456788888888766554452 35555666789999999999998853211 2235678888999999876
Q ss_pred CC------CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 161 LE------DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 161 ~~------~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
.. +.+.+.+|-|+-|.++.++=+.||+.+.+.|.-++++..
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 43 139999999999999999999999999999988877643
No 178
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.13 E-value=0.0053 Score=50.74 Aligned_cols=98 Identities=17% Similarity=0.099 Sum_probs=55.5
Q ss_pred eEEEECCC--CCChh-hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-C---CCcEEEE
Q 026967 97 KFVLIHGE--GFGAW-CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-E---DEKVILV 169 (230)
Q Consensus 97 ~vvliHG~--~~~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~---~~~v~lv 169 (230)
+|=|+-|. |.... .|+.+.+.|+++||.|++.-+. .|.... .....-+..+ +.+.+.+.... . .-+++=+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~-~tfDH~-~~A~~~~~~f-~~~~~~L~~~~~~~~~~lP~~~v 95 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV-VTFDHQ-AIAREVWERF-ERCLRALQKRGGLDPAYLPVYGV 95 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC-CCCcHH-HHHHHHHHHH-HHHHHHHHHhcCCCcccCCeeee
Confidence 45555554 33333 5778999999999999998664 121110 0000011111 12222222211 1 1478889
Q ss_pred EEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 170 GHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
|||+|+-+-+.+...++..-++-|+++-
T Consensus 96 GHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 96 GHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred ecccchHHHHHHhhhccCcccceEEEec
Confidence 9999999888887766555566666654
No 179
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.04 E-value=0.0072 Score=54.80 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=61.4
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCC-CcEEEEEEchhHHHHHHHHHhCCccc
Q 026967 114 TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LED-EKVILVGHSSGGACVSYALEHFPQKI 189 (230)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v 189 (230)
+-..|.. |+.|+.+.+. ..+....++++.......+++++ ..+ .|.+|+|-+.||..++.+|+.+|+.+
T Consensus 93 vG~AL~~-GHPvYFV~F~------p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFF------PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHc-CCCeEEEEec------CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 4445554 8999888765 33455568888888888887765 332 38999999999999999999999999
Q ss_pred ceEEEeccccC
Q 026967 190 SKAIFLCATMV 200 (230)
Q Consensus 190 ~~vv~i~~~~~ 200 (230)
.-+|+-++++.
T Consensus 166 gplvlaGaPls 176 (581)
T PF11339_consen 166 GPLVLAGAPLS 176 (581)
T ss_pred CceeecCCCcc
Confidence 98888766653
No 180
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.01 E-value=0.0024 Score=51.90 Aligned_cols=53 Identities=25% Similarity=0.404 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 149 YSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 149 ~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
+.+...++|..... .++|.|+|.|.||-+|+.+|..+| .|+++|.+++.....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEe
Confidence 45566667766543 259999999999999999999998 799999999886443
No 181
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.95 E-value=0.0021 Score=48.14 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
...+.+.+++++.+. .++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHh
Confidence 334555555555554 589999999999998777654
No 182
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.80 E-value=0.0054 Score=50.35 Aligned_cols=50 Identities=26% Similarity=0.332 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC----CcccceEEEeccccCCC
Q 026967 151 KPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF----PQKISKAIFLCATMVSD 202 (230)
Q Consensus 151 ~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~----p~~v~~vv~i~~~~~~~ 202 (230)
.-+..+++... .++++.|||.||++|.+++... .++|.+++..+++....
T Consensus 73 ~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 73 AYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 33444444433 3699999999999999998764 34788999998876543
No 183
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.77 E-value=0.022 Score=46.27 Aligned_cols=104 Identities=15% Similarity=0.085 Sum_probs=65.8
Q ss_pred CcceEEEECCCCCChhhHH----HHHHHHHHCCCeEEEeCCCC----CCCCC---------CC----------------C
Q 026967 94 QYKKFVLIHGEGFGAWCWY----KTVASLEEVGLIPTALDLKG----SGIDL---------SD----------------T 140 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~----~~~~~L~~~G~~vi~~D~~G----~G~S~---------~~----------------~ 140 (230)
.++-|+++||+-.+...|. .+...|.+. +..+.+|-|- -+.+. .+ .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3567999999988887764 356666666 7777777662 01100 00 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHhC------C--cccceEEEeccccCC
Q 026967 141 NSVTTLAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHF------P--QKISKAIFLCATMVS 201 (230)
Q Consensus 141 ~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~------p--~~v~~vv~i~~~~~~ 201 (230)
......+.-...+.+++.+.++ + .|+|+|.|+.++..++... . ..++-+|+++++...
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPFD---GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPFD---GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCCc---cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 0111233335556666666553 4 6999999999988887621 1 136889999998765
No 184
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.69 E-value=0.0063 Score=53.47 Aligned_cols=86 Identities=17% Similarity=0.170 Sum_probs=60.6
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC---CCcEEEEEE
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE---DEKVILVGH 171 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvGh 171 (230)
...-||+.|=|+..+.=..+.++|.++|+.|+.+|---+=.+ ..+.++.+.|+..+++.... ..++.|+|+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 345688888766555556788999999999999994433222 23557777788777766532 259999999
Q ss_pred chhHHHHHHHHHhCC
Q 026967 172 SSGGACVSYALEHFP 186 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p 186 (230)
|+|+-+...+-.+.|
T Consensus 334 SfGADvlP~~~n~L~ 348 (456)
T COG3946 334 SFGADVLPFAYNRLP 348 (456)
T ss_pred cccchhhHHHHHhCC
Confidence 999987655554444
No 185
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.69 E-value=0.013 Score=47.96 Aligned_cols=22 Identities=45% Similarity=0.582 Sum_probs=18.8
Q ss_pred CCcEEEEEEchhHHHHHHHHHh
Q 026967 163 DEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+.++++.|||+||.+|..++..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4589999999999998887754
No 186
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.63 E-value=0.0086 Score=48.63 Aligned_cols=84 Identities=15% Similarity=0.089 Sum_probs=55.0
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCe-EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLI-PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
.++..|||+.|||.+...+..+.. ..++. ++++|++..- ... + +..-+.|.||++
T Consensus 9 ~~~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l~-------~d~-------~-------~~~y~~i~lvAW 64 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDLD-------FDF-------D-------LSGYREIYLVAW 64 (213)
T ss_pred CCCeEEEEEecCCCChHHhhhccC---CCCccEEEEecCcccc-------ccc-------c-------cccCceEEEEEE
Confidence 345799999999999877754421 22454 4556777211 000 1 111249999999
Q ss_pred chhHHHHHHHHHhCCcccceEEEeccccCCC
Q 026967 172 SSGGACVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
|||-.+|..+....| +...|.|++.+.+.
T Consensus 65 SmGVw~A~~~l~~~~--~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 65 SMGVWAANRVLQGIP--FKRAIAINGTPYPI 93 (213)
T ss_pred eHHHHHHHHHhccCC--cceeEEEECCCCCc
Confidence 999999988766543 77888888876543
No 187
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.46 E-value=0.0047 Score=51.54 Aligned_cols=59 Identities=20% Similarity=0.381 Sum_probs=44.5
Q ss_pred HHHHHHHh-cCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCCCCCChhhhh
Q 026967 152 PLLDYLEN-LLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVSDGQRPFDVF 210 (230)
Q Consensus 152 ~l~~~l~~-l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~~~~~~~ 210 (230)
.+.-+++. ... .++..|+|||+||.+++.+...+|+.+...++++|...-.+......+
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~ 183 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREI 183 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccc
Confidence 44444444 222 247999999999999999999999999999999998766555444443
No 188
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.42 E-value=0.016 Score=53.83 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=79.0
Q ss_pred CCCcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCC---C----CCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 92 NIQYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID---L----SDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S---~----~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
+++.|++|+.=|.-+... .|....-.|.++||-......||-|.- + .-.....++.|+.+....+++.-..
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 345677887777633322 344444567788987666677876532 1 1123456888888877777766443
Q ss_pred -CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 163 -DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 163 -~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
.+.++++|-|.||+++-..+.+.|+.++++|+--|++..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 358999999999999999999999999999998888653
No 189
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.40 E-value=0.01 Score=54.80 Aligned_cols=106 Identities=22% Similarity=0.190 Sum_probs=62.5
Q ss_pred cceEEEECCCCCChhh---H--HHHHHHHHHCCCeEEEeCCC----CCCCCC-CCCCCCCCHHHHHH---HHHHHHHhcC
Q 026967 95 YKKFVLIHGEGFGAWC---W--YKTVASLEEVGLIPTALDLK----GSGIDL-SDTNSVTTLAEYSK---PLLDYLENLL 161 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~---~--~~~~~~L~~~G~~vi~~D~~----G~G~S~-~~~~~~~~~~~~~~---~l~~~l~~l~ 161 (230)
-|++|++||++..... + ......+.....-|+.+.+| |+.... .....-..+.|... .+..-+..++
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 5899999999653332 2 22333344445777778877 221111 11123334444444 4445555565
Q ss_pred C-CCcEEEEEEchhHHHHHHHHHh--CCcccceEEEeccccC
Q 026967 162 E-DEKVILVGHSSGGACVSYALEH--FPQKISKAIFLCATMV 200 (230)
Q Consensus 162 ~-~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~vv~i~~~~~ 200 (230)
. .++|+|+|||.||..+..++.. ....++++|..++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 4 3799999999999988776542 1245777777777643
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.36 E-value=0.0054 Score=56.66 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=85.8
Q ss_pred eeeecccCCeeeE--Eee-----cCCCcceEEEECCCCC-Chh-hHHHHHHHHHHCCCeEEEeCCCCCCC---CCCC---
Q 026967 75 TLSESLSNGKQDT--NIL-----ENIQYKKFVLIHGEGF-GAW-CWYKTVASLEEVGLIPTALDLKGSGI---DLSD--- 139 (230)
Q Consensus 75 ~~~~~~~~~~~~~--~~~-----~~~~~~~vvliHG~~~-~~~-~~~~~~~~L~~~G~~vi~~D~~G~G~---S~~~--- 139 (230)
.+..+..+|.++. +.. .++++|.+|+.+|.-+ +-. .|..-...|.+.|+.....|.||-|+ .+..
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~ 522 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGR 522 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccc
Confidence 3445555665554 222 1346788888887633 222 35444445566899888889999654 3321
Q ss_pred -CCCCCCHHHHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 140 -TNSVTTLAEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 140 -~~~~~~~~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
......+.|+..-+..+++.-.. ..++.+.|.|.||.++..++..+|+.+.++|+--|++.
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 22445778887777777765432 35999999999999999999999999999998777764
No 191
>PLN02209 serine carboxypeptidase
Probab=96.30 E-value=0.052 Score=49.01 Aligned_cols=108 Identities=18% Similarity=0.118 Sum_probs=66.6
Q ss_pred CcceEEEECCCCCChhhHHHHHH----------------HHHHC------CCeEEEeC-CCCCCCCCCCCC-CCCCHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVA----------------SLEEV------GLIPTALD-LKGSGIDLSDTN-SVTTLAEY 149 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~----------------~L~~~------G~~vi~~D-~~G~G~S~~~~~-~~~~~~~~ 149 (230)
..|+|+++.|+++++..+..+.+ .|..+ -..++-+| ..|.|.|..... ...+-++.
T Consensus 67 ~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~ 146 (437)
T PLN02209 67 EDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSE 146 (437)
T ss_pred CCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 46889999999777654422221 11111 25688899 558999863322 11222334
Q ss_pred HHHHHHHHHhc----CC--CCcEEEEEEchhHHHHHHHHHh----C------CcccceEEEeccccCC
Q 026967 150 SKPLLDYLENL----LE--DEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATMVS 201 (230)
Q Consensus 150 ~~~l~~~l~~l----~~--~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~vv~i~~~~~~ 201 (230)
++++.++|..+ +. ..+++|.|.|+||..+..+|.. . +-.++++++.+++..+
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 56666666553 21 2489999999999966665532 1 1257788888887654
No 192
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.22 E-value=0.012 Score=47.55 Aligned_cols=68 Identities=18% Similarity=0.161 Sum_probs=44.4
Q ss_pred HHHHCCCeEEEeCCCCCCCCC------C--CCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 117 SLEEVGLIPTALDLKGSGIDL------S--DTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~------~--~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
.+... .+|++|-+|=..... . .......+.|......++|++.+.+.+++|+|||.|+.++.+++..+
T Consensus 41 ~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34443 678888766321110 0 01112244566667777888887777999999999999999998764
No 193
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.20 E-value=0.18 Score=45.51 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=64.9
Q ss_pred CcceEEEECCCCCChhhHHHHH---H-------------HHHHC------CCeEEEeC-CCCCCCCCCCCCCCC-CHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTV---A-------------SLEEV------GLIPTALD-LKGSGIDLSDTNSVT-TLAEY 149 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~---~-------------~L~~~------G~~vi~~D-~~G~G~S~~~~~~~~-~~~~~ 149 (230)
..|.|+++.|+++++..+..+. . .|..+ -..++-+| ..|.|.|........ +-.+.
T Consensus 65 ~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~ 144 (433)
T PLN03016 65 EDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDISE 144 (433)
T ss_pred cCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCHHH
Confidence 4678999999977665332111 1 11111 25788999 558999864322211 11122
Q ss_pred HHHHHHHHHh----cCC--CCcEEEEEEchhHHHHHHHHHh----C------CcccceEEEeccccCCC
Q 026967 150 SKPLLDYLEN----LLE--DEKVILVGHSSGGACVSYALEH----F------PQKISKAIFLCATMVSD 202 (230)
Q Consensus 150 ~~~l~~~l~~----l~~--~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~vv~i~~~~~~~ 202 (230)
++++.++|.. ... ..+++|+|.|+||..+..+|.. . +-.++++++-+++..+.
T Consensus 145 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 145 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred HHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 3455555544 322 3589999999999976666542 1 23578899888876543
No 194
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.88 E-value=0.048 Score=54.10 Aligned_cols=98 Identities=10% Similarity=0.106 Sum_probs=73.7
Q ss_pred CCCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 92 NIQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
....|++.|+|...+....+..++..| ..|-+|.........+++++.++-...-++++.+..+.-++|+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 456789999999988776666666554 3455555554455667888888888888888887779999999
Q ss_pred chhHHHHHHHHHhCC--cccceEEEecccc
Q 026967 172 SSGGACVSYALEHFP--QKISKAIFLCATM 199 (230)
Q Consensus 172 S~Gg~~a~~~a~~~p--~~v~~vv~i~~~~ 199 (230)
|+|+.++..+|.... +....+|++++.+
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999988875432 3466689988874
No 195
>PLN00413 triacylglycerol lipase
Probab=95.79 E-value=0.036 Score=50.01 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh---C-----CcccceEEEeccccC
Q 026967 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH---F-----PQKISKAIFLCATMV 200 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~v~~vv~i~~~~~ 200 (230)
+....+.++++..... ++++.|||+||.+|..++.. + ..++..+...+.+-.
T Consensus 269 ~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 4455666666665544 89999999999999888742 1 123455666666543
No 196
>PLN02162 triacylglycerol lipase
Probab=95.75 E-value=0.037 Score=49.85 Aligned_cols=50 Identities=28% Similarity=0.224 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh---C-----CcccceEEEeccccC
Q 026967 150 SKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH---F-----PQKISKAIFLCATMV 200 (230)
Q Consensus 150 ~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~v~~vv~i~~~~~ 200 (230)
.+.+.+++.+.+. .++++.|||+||.+|..+|.. + .+++.+++..+.+-.
T Consensus 265 ~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 265 RQMLRDKLARNKN-LKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred HHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 3444555555443 489999999999999887542 1 123445666655543
No 197
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.70 E-value=0.025 Score=47.99 Aligned_cols=107 Identities=19% Similarity=0.193 Sum_probs=61.7
Q ss_pred cceEEEECCCCCChh-hHHHHHHHHHHCC----CeEEEeCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHhcCC----CC
Q 026967 95 YKKFVLIHGEGFGAW-CWYKTVASLEEVG----LIPTALDLKGSGI-DLSDTNSVTTLAEYSKPLLDYLENLLE----DE 164 (230)
Q Consensus 95 ~~~vvliHG~~~~~~-~~~~~~~~L~~~G----~~vi~~D~~G~G~-S~~~~~~~~~~~~~~~~l~~~l~~l~~----~~ 164 (230)
-|+++++||-..... ..-.+++.|...| -.++.+|.--.-. ..............+.++.-+++.... ..
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~ 177 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSADAD 177 (299)
T ss_pred ccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccccCC
Confidence 468899998522111 1123444444443 3455555321000 000011112233334455555554322 24
Q ss_pred cEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 165 KVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 165 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
.-+|+|-|+||.+++.++..+|+.|..|+..++.+..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 6789999999999999999999999999999997643
No 198
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.69 E-value=0.05 Score=49.23 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=71.5
Q ss_pred CcceEEEECCCCCChhhHHHHHHH----HHH--------------CCCeEEEeC-CCCCCCCCC-CCCCCCCHHHHHHHH
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVAS----LEE--------------VGLIPTALD-LKGSGIDLS-DTNSVTTLAEYSKPL 153 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~----L~~--------------~G~~vi~~D-~~G~G~S~~-~~~~~~~~~~~~~~l 153 (230)
+.|.|+++.|+.+++..|..+.+. +.. .--.++.+| .-|.|.|.. ......+.....+|+
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhH
Confidence 467899999999988777555331 000 013578888 558888864 233334455555555
Q ss_pred HHHHHhc--------CCCCcEEEEEEchhHHHHHHHHHhCCc---ccceEEEeccccCCCC
Q 026967 154 LDYLENL--------LEDEKVILVGHSSGGACVSYALEHFPQ---KISKAIFLCATMVSDG 203 (230)
Q Consensus 154 ~~~l~~l--------~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~vv~i~~~~~~~~ 203 (230)
..+++.+ ....+.+|+|-|+||..+..+|...-+ ..+++|++++.+..++
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 5555443 222489999999999987777754333 4778888888776666
No 199
>PLN02454 triacylglycerol lipase
Probab=95.44 E-value=0.038 Score=49.18 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHHHHh
Q 026967 150 SKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 150 ~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
...+..+++..... .+|+++|||+||.+|..+|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34444555444333 249999999999999888753
No 200
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.32 E-value=0.078 Score=48.90 Aligned_cols=108 Identities=19% Similarity=0.151 Sum_probs=62.0
Q ss_pred cceEEEECCCCCChhh------H-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HhcCC-C
Q 026967 95 YKKFVLIHGEGFGAWC------W-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYL---ENLLE-D 163 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~------~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l---~~l~~-~ 163 (230)
+-.||-+||+|+-+.. | +.|+..| |..|+.+|+.=--+. +.+..+++..-.-..++ ..++. .
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEa----PFPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEA----PFPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCC----CCCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 3368889999874432 2 3455555 799999997522211 22223333322222233 23443 3
Q ss_pred CcEEEEEEchhHHH----HHHHHHhCCcccceEEEe-ccccCCCCCChhhh
Q 026967 164 EKVILVGHSSGGAC----VSYALEHFPQKISKAIFL-CATMVSDGQRPFDV 209 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~----a~~~a~~~p~~v~~vv~i-~~~~~~~~~~~~~~ 209 (230)
++|+++|.|.||.+ ++++++..-...+++++. .+++....+++...
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~q~~pSPsRl 519 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLLQPAPSPSRL 519 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhcccCCCHHHH
Confidence 79999999999995 455555443345677664 45555555565444
No 201
>PLN02408 phospholipase A1
Probab=95.31 E-value=0.044 Score=48.06 Aligned_cols=37 Identities=16% Similarity=0.245 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHHHHh
Q 026967 148 EYSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+..+.+..+++..+.. .+|++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3345666666665533 369999999999998887754
No 202
>PLN02571 triacylglycerol lipase
Probab=95.22 E-value=0.035 Score=49.42 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHHHHh
Q 026967 147 AEYSKPLLDYLENLLED-EKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
++...++..+++..... .+|+++|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566777777765542 369999999999999888754
No 203
>PLN02310 triacylglycerol lipase
Probab=95.21 E-value=0.069 Score=47.47 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEEEEchhHHHHHHHHH
Q 026967 147 AEYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
++....+..+++... .+.+|+++|||+||.+|..+|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 444556666666543 2348999999999999988774
No 204
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.19 E-value=0.068 Score=42.24 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=45.0
Q ss_pred CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc---CCCCcEEEEEEchhHHHHHHHHHh--C----CcccceEE
Q 026967 123 LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL---LEDEKVILVGHSSGGACVSYALEH--F----PQKISKAI 193 (230)
Q Consensus 123 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~--~----p~~v~~vv 193 (230)
..+..+++|-.... .....+...-+.++...++.. ..+.+++|+|+|.|+.++..++.. . .++|.++|
T Consensus 40 ~~~~~V~YpA~~~~---~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avv 116 (179)
T PF01083_consen 40 VAVQGVEYPASLGP---NSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVV 116 (179)
T ss_dssp EEEEE--S---SCG---GSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEE
T ss_pred eEEEecCCCCCCCc---ccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEE
Confidence 44555666632211 111223444445555555432 334599999999999999998876 2 35789999
Q ss_pred EeccccCCCC
Q 026967 194 FLCATMVSDG 203 (230)
Q Consensus 194 ~i~~~~~~~~ 203 (230)
+++-+....+
T Consensus 117 lfGdP~~~~~ 126 (179)
T PF01083_consen 117 LFGDPRRGAG 126 (179)
T ss_dssp EES-TTTBTT
T ss_pred EecCCcccCC
Confidence 9987765443
No 205
>PLN02802 triacylglycerol lipase
Probab=94.93 E-value=0.065 Score=48.73 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHh
Q 026967 148 EYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+...++..+++.... +.+|++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344566666665543 2479999999999998887754
No 206
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.82 E-value=0.062 Score=49.01 Aligned_cols=37 Identities=19% Similarity=0.253 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhcC---CCCcEEEEEEchhHHHHHHHHH
Q 026967 147 AEYSKPLLDYLENLL---EDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
++...++..+++... .+.+|+|.|||+||.+|..+|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 344566777776654 2347999999999999988774
No 207
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.60 E-value=0.061 Score=47.43 Aligned_cols=88 Identities=20% Similarity=0.304 Sum_probs=48.8
Q ss_pred CCcceEEEECCCCC-ChhhHHHHHHHHHHCCCeEEEeCCCCC-CCCCCCCCCCCCH-HHHHHHHHHHHHhcCCCCcEEEE
Q 026967 93 IQYKKFVLIHGEGF-GAWCWYKTVASLEEVGLIPTALDLKGS-GIDLSDTNSVTTL-AEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 93 ~~~~~vvliHG~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~-G~S~~~~~~~~~~-~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
+....+|++||+.+ ...+|...+...... +.=..+..+|+ +...........+ ...+.++.+.+...... ++.++
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~-kISfv 155 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE-KISFV 155 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc-eeeee
Confidence 34457999999977 566787766665554 22113333332 2211111111111 22233444444444455 99999
Q ss_pred EEchhHHHHHHHH
Q 026967 170 GHSSGGACVSYAL 182 (230)
Q Consensus 170 GhS~Gg~~a~~~a 182 (230)
|||+||.++..+.
T Consensus 156 ghSLGGLvar~AI 168 (405)
T KOG4372|consen 156 GHSLGGLVARYAI 168 (405)
T ss_pred eeecCCeeeeEEE
Confidence 9999999876654
No 208
>PLN02324 triacylglycerol lipase
Probab=94.54 E-value=0.061 Score=47.87 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhcCCC-CcEEEEEEchhHHHHHHHHH
Q 026967 148 EYSKPLLDYLENLLED-EKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~ 183 (230)
+....+..+++..... .+|++.|||+||.+|..+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3445666777665432 47999999999999988875
No 209
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.48 E-value=0.18 Score=43.56 Aligned_cols=80 Identities=21% Similarity=0.193 Sum_probs=51.5
Q ss_pred CeEEEeCCC-CCCCCCCCCCCC-CCHHHHHHHHHHHHHhc----CC--CCcEEEEEEchhHHHHHHHHHh----C-----
Q 026967 123 LIPTALDLK-GSGIDLSDTNSV-TTLAEYSKPLLDYLENL----LE--DEKVILVGHSSGGACVSYALEH----F----- 185 (230)
Q Consensus 123 ~~vi~~D~~-G~G~S~~~~~~~-~~~~~~~~~l~~~l~~l----~~--~~~v~lvGhS~Gg~~a~~~a~~----~----- 185 (230)
..++-+|.| |.|.|....... .+-...+.++..+|..+ +. ..+++|.|-|+||..+..+|.. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368899988 999996432221 12122335666655543 21 3599999999999977666643 1
Q ss_pred -CcccceEEEeccccCCC
Q 026967 186 -PQKISKAIFLCATMVSD 202 (230)
Q Consensus 186 -p~~v~~vv~i~~~~~~~ 202 (230)
+-.++++++-+++..+.
T Consensus 82 ~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CceeeeEEEeCCCCCCcc
Confidence 12577888888876553
No 210
>PLN02934 triacylglycerol lipase
Probab=94.37 E-value=0.074 Score=48.41 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHH
Q 026967 148 EYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
+....+.+++++.+. .++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 445556666666544 49999999999999988863
No 211
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.30 E-value=0.14 Score=44.70 Aligned_cols=40 Identities=30% Similarity=0.536 Sum_probs=30.4
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCCc-----ccceEEEeccccCCC
Q 026967 163 DEKVILVGHSSGGACVSYALEHFPQ-----KISKAIFLCATMVSD 202 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~vv~i~~~~~~~ 202 (230)
..+|.|||||+|+.+...++....+ .|+.+++++++...+
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3489999999999987776644333 388999998887643
No 212
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.03 E-value=0.12 Score=45.93 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=83.0
Q ss_pred eEEeecCCCcceEEEECCCCCChhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHhcCC
Q 026967 86 DTNILENIQYKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTN--SVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 86 ~~~~~~~~~~~~vvliHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~l~~l~~ 162 (230)
+.+..++-..|+|++.-|++-..... ......|. -+-+.+.+|-++.|...+. ...++.+.+.|...+++.++.
T Consensus 54 vtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 54 VTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred EEEEEcCCCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 34555777789999999987654323 23444443 4578889999999864332 335778888888877777643
Q ss_pred --CCcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 163 --DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 163 --~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
..+.+-.|-|-||+.+++.=.-||+.|++.|..-++..
T Consensus 131 iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 131 IYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred hccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 34899999999999999998889999999998766654
No 213
>PLN02753 triacylglycerol lipase
Probab=93.92 E-value=0.096 Score=47.89 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCC----CCcEEEEEEchhHHHHHHHHH
Q 026967 147 AEYSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
++....+..+++..+. +.+|++.|||+||.+|..+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445556666665532 358999999999999988874
No 214
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=93.87 E-value=1 Score=36.95 Aligned_cols=101 Identities=16% Similarity=0.115 Sum_probs=63.9
Q ss_pred eEEEECCCCCC-hhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC--CcEEEEEEch
Q 026967 97 KFVLIHGEGFG-AWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED--EKVILVGHSS 173 (230)
Q Consensus 97 ~vvliHG~~~~-~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~--~~v~lvGhS~ 173 (230)
++|++=||.+. .....+..+...+.|++++.+-.+-...... ...+...++.+.+.+...... .++++=.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP----SKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 46777788544 4567777777777899999998663222111 035556666666666655443 2799999999
Q ss_pred hHHHHHHHHHh-----C-----CcccceEEEeccccCC
Q 026967 174 GGACVSYALEH-----F-----PQKISKAIFLCATMVS 201 (230)
Q Consensus 174 Gg~~a~~~a~~-----~-----p~~v~~vv~i~~~~~~ 201 (230)
||...+..... . -++++++|+=+++...
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 88865544321 1 1238888877666543
No 215
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.82 E-value=0.33 Score=44.00 Aligned_cols=127 Identities=16% Similarity=0.059 Sum_probs=73.8
Q ss_pred eeeecccCCeeeEEee-c----CCCcceEEEECCCCCChhhHHHHHHHH-----HHC-------------CCeEEEeCCC
Q 026967 75 TLSESLSNGKQDTNIL-E----NIQYKKFVLIHGEGFGAWCWYKTVASL-----EEV-------------GLIPTALDLK 131 (230)
Q Consensus 75 ~~~~~~~~~~~~~~~~-~----~~~~~~vvliHG~~~~~~~~~~~~~~L-----~~~-------------G~~vi~~D~~ 131 (230)
-+......+.++.+++ + +...|.||.+.|+++.+..- .++..+ ... -..++-+|.|
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~P 126 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQP 126 (454)
T ss_pred eEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecC
Confidence 3444444555665444 2 23467899999997766432 222221 111 1357778876
Q ss_pred -CCCCCCCCCCC--CCCHHHHHHHHHHHHH----hcCC--CCcEEEEEEchhHHHHHHHHHh----C------CcccceE
Q 026967 132 -GSGIDLSDTNS--VTTLAEYSKPLLDYLE----NLLE--DEKVILVGHSSGGACVSYALEH----F------PQKISKA 192 (230)
Q Consensus 132 -G~G~S~~~~~~--~~~~~~~~~~l~~~l~----~l~~--~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~v 192 (230)
|.|.|...... ...-...++|...+|. +++. ..+++|.|-|++|..+..+|.. + .-.++++
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 88888632221 1233444555555554 4332 3699999999999877666643 2 1357788
Q ss_pred EEeccccCCC
Q 026967 193 IFLCATMVSD 202 (230)
Q Consensus 193 v~i~~~~~~~ 202 (230)
++-++.....
T Consensus 207 ~IGNg~td~~ 216 (454)
T KOG1282|consen 207 AIGNGLTDPE 216 (454)
T ss_pred EecCcccCcc
Confidence 8777776544
No 216
>PLN02761 lipase class 3 family protein
Probab=93.41 E-value=0.13 Score=46.93 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhcC-----CCCcEEEEEEchhHHHHHHHHH
Q 026967 147 AEYSKPLLDYLENLL-----EDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~-----~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
++....|..+++... .+.+|+++|||+||.+|..+|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344556666666552 2247999999999999988774
No 217
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.38 E-value=0.22 Score=44.16 Aligned_cols=38 Identities=18% Similarity=0.146 Sum_probs=34.1
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccCC
Q 026967 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
-+++++|+|.||+++...|.-.|..+++++=-+++..+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 48999999999999999999999999999988877653
No 218
>PLN02719 triacylglycerol lipase
Probab=93.01 E-value=0.16 Score=46.31 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhcCC----CCcEEEEEEchhHHHHHHHHH
Q 026967 148 EYSKPLLDYLENLLE----DEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
+....+..+++..+. +.+|++.|||+||.+|..+|.
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 344556666665432 248999999999999988774
No 219
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.86 E-value=0.21 Score=42.29 Aligned_cols=46 Identities=26% Similarity=0.386 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 150 SKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 150 ~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
+-|+...+..+..+.++.+.|||+||.+|..+...+. +-.|.+-+|
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4455555566666669999999999999998887653 444555444
No 220
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.86 E-value=0.21 Score=42.29 Aligned_cols=46 Identities=26% Similarity=0.386 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 150 SKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 150 ~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
+-|+...+..+..+.++.+.|||+||.+|..+...+. +-.|.+-+|
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4455555566666669999999999999998887653 444555444
No 221
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.82 E-value=0.19 Score=43.86 Aligned_cols=37 Identities=27% Similarity=0.287 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 147 AEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
..+.+++..+++..+.- +|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~-~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNY-SIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCc-EEEEecCChHHHHHHHHHHH
Confidence 56666777777777754 99999999999998887753
No 222
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.66 E-value=0.3 Score=45.40 Aligned_cols=101 Identities=10% Similarity=0.051 Sum_probs=59.9
Q ss_pred cceEEEECCCCC--ChhhHH-HHHHHHHHCC--CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc-------CC
Q 026967 95 YKKFVLIHGEGF--GAWCWY-KTVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL-------LE 162 (230)
Q Consensus 95 ~~~vvliHG~~~--~~~~~~-~~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-------~~ 162 (230)
.|.+|++||.+. ...+|+ .|-..|.-.| ..|..+|++. ......+...++.+..+.... ..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n-------~igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNN-------PIGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccC-------CCCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 567899999871 222332 3333333333 5566777662 111235555555555555421 11
Q ss_pred CCcEEEEEEchhHHHHHHHHHhCC-cccceEEEeccccCCC
Q 026967 163 DEKVILVGHSSGGACVSYALEHFP-QKISKAIFLCATMVSD 202 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~~p-~~v~~vv~i~~~~~~~ 202 (230)
..+|+|+|+|+|+.++........ ..|+++|+|+-+....
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v 289 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV 289 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC
Confidence 369999999999887777665433 2489999998776543
No 223
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.52 E-value=0.44 Score=37.45 Aligned_cols=44 Identities=23% Similarity=0.266 Sum_probs=35.3
Q ss_pred HHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 155 DYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.++++.-+. ..++-|-||||+.+..+..++|+.+.++|.+++--
T Consensus 93 Yv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 93 YVIEEALPG-STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHHhhcCC-CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 334433333 67888999999999999999999999999998753
No 224
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.91 E-value=1.6 Score=35.84 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=50.8
Q ss_pred CCeEEEeCCCCC-CC-C-CCCCCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEEchhHHHHHHHHHhCCc------ccce
Q 026967 122 GLIPTALDLKGS-GI-D-LSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGHSSGGACVSYALEHFPQ------KISK 191 (230)
Q Consensus 122 G~~vi~~D~~G~-G~-S-~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~~~p~------~v~~ 191 (230)
|+.+..+++|.. +- + ........+..+-++.+.+.+.... .+.+++++|+|+|+.++..++.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777887752 10 0 1112334466666777777776532 44699999999999998877654311 1234
Q ss_pred EEEeccccCCCCC
Q 026967 192 AIFLCATMVSDGQ 204 (230)
Q Consensus 192 vv~i~~~~~~~~~ 204 (230)
.|+++-+..+++.
T Consensus 82 fVl~gnP~rp~GG 94 (225)
T PF08237_consen 82 FVLIGNPRRPNGG 94 (225)
T ss_pred EEEecCCCCCCCc
Confidence 6666666554443
No 225
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.89 E-value=3 Score=29.70 Aligned_cols=88 Identities=20% Similarity=0.209 Sum_probs=57.7
Q ss_pred CChhh-HHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHH--HHHHH
Q 026967 106 FGAWC-WYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC--VSYAL 182 (230)
Q Consensus 106 ~~~~~-~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~--a~~~a 182 (230)
.+.+. |..+.+.+..+||..-.+.++..|.+..........+.-...+..+++.+... +.++||-|--.=. -..++
T Consensus 7 ~SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 7 NSPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHH
Confidence 34444 44566777788887777777777655322211112234456777888887766 9999998866543 34567
Q ss_pred HhCCcccceEEE
Q 026967 183 EHFPQKISKAIF 194 (230)
Q Consensus 183 ~~~p~~v~~vv~ 194 (230)
.++|++|.++..
T Consensus 86 ~~~P~~i~ai~I 97 (100)
T PF09949_consen 86 RRFPGRILAIYI 97 (100)
T ss_pred HHCCCCEEEEEE
Confidence 889999988754
No 226
>PLN02847 triacylglycerol lipase
Probab=91.75 E-value=0.33 Score=45.11 Aligned_cols=22 Identities=36% Similarity=0.469 Sum_probs=18.3
Q ss_pred CCcEEEEEEchhHHHHHHHHHh
Q 026967 163 DEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3589999999999998777654
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.59 E-value=1 Score=41.24 Aligned_cols=37 Identities=16% Similarity=0.252 Sum_probs=34.4
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccccC
Q 026967 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATMV 200 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~~ 200 (230)
+.-+..|.|-||--++.+|.+||+.+++||.-+|...
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred CceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 5889999999999999999999999999999888764
No 228
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.20 E-value=0.55 Score=43.55 Aligned_cols=57 Identities=30% Similarity=0.388 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHhcCC--CCcEEEEEEchhHHHHHHHHHh-----CCc------ccceEEEeccccC
Q 026967 144 TTLAEYSKPLLDYLENLLE--DEKVILVGHSSGGACVSYALEH-----FPQ------KISKAIFLCATMV 200 (230)
Q Consensus 144 ~~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~-----~p~------~v~~vv~i~~~~~ 200 (230)
.++......+.+.+.+... +.+|+.+||||||.++-.++.. .|+ ...++||++.+.-
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 3555555666666655433 4699999999999987655432 232 4678999988753
No 229
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.29 E-value=2.8 Score=38.15 Aligned_cols=110 Identities=15% Similarity=0.003 Sum_probs=66.9
Q ss_pred CeeeEEeecCC--CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEe-CCCCCCCCCCCCCCCCCH-HHHHHHHHHHHH
Q 026967 83 GKQDTNILENI--QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL-DLKGSGIDLSDTNSVTTL-AEYSKPLLDYLE 158 (230)
Q Consensus 83 ~~~~~~~~~~~--~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~-D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~ 158 (230)
...+.+++.++ +.|..|++-|+-. ++.|+.. -.+...|...+.+ |.|=-|.+-. .....+ ....+-|.+.|+
T Consensus 275 reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy-~MMk~Lg~PfLL~~DpRleGGaFY--lGs~eyE~~I~~~I~~~L~ 350 (511)
T TIGR03712 275 RQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGY-FMMKRLGAPFLLIGDPRLEGGAFY--LGSDEYEQGIINVIQEKLD 350 (511)
T ss_pred CCeeEEecCCcCCCCCeEEeeccCcc-cCcchhH-HHHHhcCCCeEEeeccccccceee--eCcHHHHHHHHHHHHHHHH
Confidence 33444444433 3456899999855 4444321 1233445655555 7775554421 111223 344567778888
Q ss_pred hcCCC-CcEEEEEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 159 NLLED-EKVILVGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 159 ~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
.|+.+ +.++|-|-|||.+-|+++++... .+++|+--|.
T Consensus 351 ~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 351 YLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred HhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 88764 68999999999999999988643 5566654443
No 230
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=87.91 E-value=0.73 Score=33.55 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=17.7
Q ss_pred CeeeE-Eee--cCCCcceEEEECCCCCChhhHHHHH
Q 026967 83 GKQDT-NIL--ENIQYKKFVLIHGEGFGAWCWYKTV 115 (230)
Q Consensus 83 ~~~~~-~~~--~~~~~~~vvliHG~~~~~~~~~~~~ 115 (230)
+..++ ++. ..++..+|||+|||.++-..|.+++
T Consensus 77 g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 77 GLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred eEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhhC
Confidence 55554 222 3445669999999999888776653
No 231
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=87.76 E-value=0.42 Score=31.00 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=10.5
Q ss_pred CcceEEEECCCCCChhhH
Q 026967 94 QYKKFVLIHGEGFGAWCW 111 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~ 111 (230)
.+|+|++.||+..++..|
T Consensus 42 ~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp T--EEEEE--TT--GGGG
T ss_pred CCCcEEEECCcccChHHH
Confidence 477999999999998887
No 232
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=86.02 E-value=5.9 Score=35.02 Aligned_cols=86 Identities=20% Similarity=0.202 Sum_probs=60.6
Q ss_pred ceEEEECCCCCCh-------hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEE
Q 026967 96 KKFVLIHGEGFGA-------WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (230)
Q Consensus 96 ~~vvliHG~~~~~-------~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (230)
..||++||.+.++ +.|..+++.+.++|+ +-.+|..-+|..+ .+++.+..+..++.... -.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~-------GleeDa~~lR~~a~~~~----~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFAD-------GLEEDAYALRLFAEVGP----ELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhcc-------chHHHHHHHHHHHHhCC----cEE
Confidence 4699999997655 469999999999866 5556877666433 36777777777777643 278
Q ss_pred EEEchhHHHHHHHHHhCCcccceEEEeccc
Q 026967 169 VGHSSGGACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 169 vGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
|..|+--.+.+ |.+||-++.+++..
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeCC
Confidence 88887554443 56778887777543
No 233
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=85.30 E-value=4.1 Score=34.51 Aligned_cols=96 Identities=19% Similarity=0.108 Sum_probs=51.6
Q ss_pred ECCCCCChhhHHHHHHHHHHCCCeEEEe------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--CCCCcEEEEEEc
Q 026967 101 IHGEGFGAWCWYKTVASLEEVGLIPTAL------DLKGSGIDLSDTNSVTTLAEYSKPLLDYLENL--LEDEKVILVGHS 172 (230)
Q Consensus 101 iHG~~~~~~~~~~~~~~L~~~G~~vi~~------D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l--~~~~~v~lvGhS 172 (230)
+||.-++.. -+..|...|+.|+++ +++|+|...........+ .++.+-++.. ...-+.++.|+=
T Consensus 11 v~G~vGn~A----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l----~~~l~~l~~~~~~~~~davltGYl 82 (281)
T COG2240 11 VYGSVGNSA----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQL----ADLLNGLEAIDKLGECDAVLTGYL 82 (281)
T ss_pred eecccccHh----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHH----HHHHHHHHhcccccccCEEEEccC
Confidence 455544432 334566678876664 799999865433333333 3333333331 122467777752
Q ss_pred h----hHHHHHHHHHhCCcccceEEEeccccCCCCC
Q 026967 173 S----GGACVSYALEHFPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 173 ~----Gg~~a~~~a~~~p~~v~~vv~i~~~~~~~~~ 204 (230)
- +-.++-.+........+.+++++|-+..++.
T Consensus 83 gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gg 118 (281)
T COG2240 83 GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGG 118 (281)
T ss_pred CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCc
Confidence 2 2223333333233456688999999877763
No 234
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=84.61 E-value=12 Score=33.55 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=66.4
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC----------------------CCCCCHHHHHHHH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------------------NSVTTLAEYSKPL 153 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l 153 (230)
|+|+++--+..-.+.+..+.+.+.+.|..|+.+|.-=.+...... +....++.+..-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 456666555555667888889999999999999965444332110 0111233444555
Q ss_pred HHHHHhcCCC---CcEEEEEEchhHHHHHHHHHhCCcccceEEE
Q 026967 154 LDYLENLLED---EKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (230)
Q Consensus 154 ~~~l~~l~~~---~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~ 194 (230)
..++..+... .-|+-+|-|.|..++..++...|-.+-+++.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 5566555432 3688899999999999999988887777664
No 235
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=84.56 E-value=2.4 Score=36.63 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=70.5
Q ss_pred CcceEEEECCCCCChh----hHHHHH-----------HHHHHCCCeEEEeCCC-CCCCCCCCCC--CCCCHHHHHHHHHH
Q 026967 94 QYKKFVLIHGEGFGAW----CWYKTV-----------ASLEEVGLIPTALDLK-GSGIDLSDTN--SVTTLAEYSKPLLD 155 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~----~~~~~~-----------~~L~~~G~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~ 155 (230)
..|..+.+.|..+... .|+.+- ..|.. ..++.+|-| |.|.|..+.. ...+..+.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 4567888888855332 233221 12333 467777766 8888864333 33467888999999
Q ss_pred HHHhcCC------CCcEEEEEEchhHHHHHHHHHhCC---------cccceEEEeccccC
Q 026967 156 YLENLLE------DEKVILVGHSSGGACVSYALEHFP---------QKISKAIFLCATMV 200 (230)
Q Consensus 156 ~l~~l~~------~~~v~lvGhS~Gg~~a~~~a~~~p---------~~v~~vv~i~~~~~ 200 (230)
+|+.+.. ..+++|+.-|+||-++...+...- -.+.+|++-++|+.
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 9987632 268999999999999888775421 24677888888864
No 236
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=84.04 E-value=1.9 Score=40.25 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=67.0
Q ss_pred CcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCC-------CCCCCCCCHHHHHHHHHHHHHhcC-CC
Q 026967 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDL-------SDTNSVTTLAEYSKPLLDYLENLL-ED 163 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~~l~-~~ 163 (230)
+.|++|+-=|+-.-+. .|.......-++|...+..+.||-|+=- ........++|+..-+.++++.-- ..
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitsp 499 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSP 499 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCH
Confidence 4566666554422221 3555555555668888899999977531 112233344555444444443321 13
Q ss_pred CcEEEEEEchhHHHHHHHHHhCCcccceEEEecccc
Q 026967 164 EKVILVGHSSGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
+++.+-|-|=||.+.-.++.++|+.+.++|+--|.+
T Consensus 500 e~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 500 EKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred HHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 689999999999999888899999998888765543
No 237
>PRK02399 hypothetical protein; Provisional
Probab=83.21 E-value=18 Score=32.33 Aligned_cols=99 Identities=19% Similarity=0.223 Sum_probs=62.7
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCC----------------------CCCCCHHHHHHHH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDT----------------------NSVTTLAEYSKPL 153 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~l 153 (230)
+.|+++--+..-.+.+..+.+.+.++|..|+.+|.-..|....+. +....++.+.+-+
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 445555444444556777888888889999999984443211000 0111223344455
Q ss_pred HHHHHhcCCC---CcEEEEEEchhHHHHHHHHHhCCcccceEEE
Q 026967 154 LDYLENLLED---EKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (230)
Q Consensus 154 ~~~l~~l~~~---~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~ 194 (230)
..++..+... .-|+-+|-|.|..++..++...|-.+-+++.
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 5555544321 3788899999999999999988877777664
No 238
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.94 E-value=5.5 Score=31.10 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=52.2
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
..||++-||+..+..+..++ +.++---++++|+.... -..++..+ ..+.+|.+|||-
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~-------ldfDfsAy--------------~hirlvAwSMGV 68 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLN-------LDFDFSAY--------------RHIRLVAWSMGV 68 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcC-------cccchhhh--------------hhhhhhhhhHHH
Confidence 48999999998886654432 22321246678876222 22233332 377899999999
Q ss_pred HHHHHHHHhCCcccceEEEeccccCC
Q 026967 176 ACVSYALEHFPQKISKAIFLCATMVS 201 (230)
Q Consensus 176 ~~a~~~a~~~p~~v~~vv~i~~~~~~ 201 (230)
.+|-++....+ ++..+.+++...+
T Consensus 69 wvAeR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCCCC
Confidence 99999887654 6666777776444
No 239
>PRK12467 peptide synthase; Provisional
Probab=81.64 E-value=18 Score=41.89 Aligned_cols=99 Identities=16% Similarity=-0.015 Sum_probs=67.8
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
+.+++.|........+..+...+.. +..++.+..++.-... ....++...+....+++.......+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~---~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDG---WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC-CCcEEEEecccccccc---CCccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 4699999998887777777777765 4788888776543221 13345666666666666665554589999999999
Q ss_pred HHHHHHHHh---CCcccceEEEeccc
Q 026967 176 ACVSYALEH---FPQKISKAIFLCAT 198 (230)
Q Consensus 176 ~~a~~~a~~---~p~~v~~vv~i~~~ 198 (230)
.++..++.. ..+.+..+.+++..
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEecc
Confidence 998877653 33456666666443
No 240
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=80.49 E-value=16 Score=30.91 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=51.2
Q ss_pred ceEEEECCCCCChh------hHHHHHHHH-HHCCCeEEEeCCCCCCC--------CC------CCCCCCCCHHHHHHHHH
Q 026967 96 KKFVLIHGEGFGAW------CWYKTVASL-EEVGLIPTALDLKGSGI--------DL------SDTNSVTTLAEYSKPLL 154 (230)
Q Consensus 96 ~~vvliHG~~~~~~------~~~~~~~~L-~~~G~~vi~~D~~G~G~--------S~------~~~~~~~~~~~~~~~l~ 154 (230)
+.|||+=|-+.+.. .-..+.+.+ ...+-..+.+=.+|.|. +. ........+.+.+....
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 45677766654332 234455555 23333444455566665 11 01112234556555555
Q ss_pred HHH-HhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 155 DYL-ENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 155 ~~l-~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
.++ +......+|.++|+|=|+++|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 554 555555689999999999999888864
No 241
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=78.54 E-value=12 Score=29.94 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=49.2
Q ss_pred HHHHHHHCCC-eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch----hHHHHHHHHHhCC-c
Q 026967 114 TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS----GGACVSYALEHFP-Q 187 (230)
Q Consensus 114 ~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~----Gg~~a~~~a~~~p-~ 187 (230)
....+...|. .|+..|.+. ...++.+.++..+.++++... . .++|+|||. |..++.++|.+.- .
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~--------~~~~~~e~~a~al~~~i~~~~-p-~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 68 ALREALAMGADRAILVSDRA--------FAGADTLATAKALAAAIKKIG-V-DLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHHHHHcCCCEEEEEeccc--------ccCCChHHHHHHHHHHHHHhC-C-CEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 4444556676 688877553 233567888999999988876 4 799999999 7788888876632 2
Q ss_pred ccceEEEe
Q 026967 188 KISKAIFL 195 (230)
Q Consensus 188 ~v~~vv~i 195 (230)
.+..++-+
T Consensus 138 lvsdv~~l 145 (202)
T cd01714 138 QITYVSKI 145 (202)
T ss_pred ccceEEEE
Confidence 34444443
No 242
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=77.65 E-value=26 Score=27.87 Aligned_cols=38 Identities=16% Similarity=-0.102 Sum_probs=29.8
Q ss_pred CCcceEEEECCCCCChhh--HHHHHHHHHHCCCeEEEeCC
Q 026967 93 IQYKKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDL 130 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~ 130 (230)
+.++.+|++.|+.++..+ -..+.+.|.+.|+.++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 346789999999776554 34577789999999999984
No 243
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=77.39 E-value=29 Score=29.92 Aligned_cols=104 Identities=12% Similarity=-0.017 Sum_probs=71.0
Q ss_pred cceEEEECCCCC-ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 95 YKKFVLIHGEGF-GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 95 ~~~vvliHG~~~-~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
.|.|+++--+.+ .+...+..++.|-.. ..|+.-||..--.... .....++.|+.+.+.+.+..++.+ +.+++.+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~-~~G~FdldDYIdyvie~~~~~Gp~--~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPL-EAGHFDLDDYIDYVIEMINFLGPD--AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeec-ccCCccHHHHHHHHHHHHHHhCCC--CcEEEEec
Confidence 456666666644 455677888888764 7888889874332221 334568999999999999999875 55566665
Q ss_pred hHH-----HHHHHHHhCCcccceEEEeccccCCC
Q 026967 174 GGA-----CVSYALEHFPQKISKAIFLCATMVSD 202 (230)
Q Consensus 174 Gg~-----~a~~~a~~~p~~v~~vv~i~~~~~~~ 202 (230)
=+. +++..+...|.....++++++++...
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 544 33333444677888999999987653
No 244
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.15 E-value=21 Score=31.36 Aligned_cols=107 Identities=20% Similarity=0.165 Sum_probs=68.6
Q ss_pred CcceEEEECCCCCChhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEE
Q 026967 94 QYKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLL-EDEKVILVGH 171 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v~lvGh 171 (230)
...+||.+=||.+..+-| .+......+.|+.++.+-.|-+-..........++.....-+.+++.... ...++++--+
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~F 116 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVF 116 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEe
Confidence 344677777776666554 56778888889999998888654433323344456666677777777665 2358888899
Q ss_pred chhHHHHHHHH---H-hC-C---cccceEEEeccccC
Q 026967 172 SSGGACVSYAL---E-HF-P---QKISKAIFLCATMV 200 (230)
Q Consensus 172 S~Gg~~a~~~a---~-~~-p---~~v~~vv~i~~~~~ 200 (230)
|+||...+... . ++ | +...++++.+.+..
T Consensus 117 S~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 117 SGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred cCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 99998544332 1 12 2 24556777766643
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.05 E-value=4.5 Score=37.14 Aligned_cols=54 Identities=22% Similarity=0.206 Sum_probs=35.4
Q ss_pred HHHHHHHHhc-CCCCcEEEEEEchhHHHHHHHHHh-----CCcccceEEEeccccCCCCC
Q 026967 151 KPLLDYLENL-LEDEKVILVGHSSGGACVSYALEH-----FPQKISKAIFLCATMVSDGQ 204 (230)
Q Consensus 151 ~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~-----~p~~v~~vv~i~~~~~~~~~ 204 (230)
+.+.+.|... ....+|.|||+|+|+-+....... .-..|..|++++++++....
T Consensus 433 ~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 433 ELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred HHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 3444444432 223599999999999977654331 12358899999998865443
No 246
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=75.48 E-value=12 Score=31.99 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=48.6
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC--------CCCC-----CCCC-CCCCHHHHHHHHHHHHHhc
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS--------GIDL-----SDTN-SVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~--------G~S~-----~~~~-~~~~~~~~~~~l~~~l~~l 160 (230)
-|.|+|.-|.++ ..+.|+..||.|+..|+.-- |..- .++. ...+.+...+.+.+.++.+
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 467899988765 67888999999999998731 1110 1121 2235566677788888888
Q ss_pred CCCCcEEEEEEch
Q 026967 161 LEDEKVILVGHSS 173 (230)
Q Consensus 161 ~~~~~v~lvGhS~ 173 (230)
+.+.-|.=+||-.
T Consensus 325 G~~ryI~NLGHGi 337 (359)
T KOG2872|consen 325 GKSRYIANLGHGI 337 (359)
T ss_pred CccceEEecCCCC
Confidence 8765666677753
No 247
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=75.12 E-value=23 Score=26.37 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=37.1
Q ss_pred CCCcceEEEECCCCCChhhHH--HHHHHHHHCCCe---EEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 92 NIQYKKFVLIHGEGFGAWCWY--KTVASLEEVGLI---PTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~~~~~--~~~~~L~~~G~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
.+.+|.|+-+||+.+....|- -+++.|-..|.. |..+... .+-+....+.++-.++..++..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~------~hFP~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIAT------HHFPHNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccc------ccCCCchHHHHHHHHHHHHHHH
Confidence 356788999999988877763 466676665532 2222211 1122334667777777777654
No 248
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=72.18 E-value=33 Score=24.56 Aligned_cols=75 Identities=19% Similarity=0.193 Sum_probs=54.5
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHC-CCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
.||.-|| .-+..+...++.+... -..+.++++. ...+.+++.+.+.+.++.+...+.++++.-=+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4677899 5566777778887765 3467777754 2247888999999999888766588888888887
Q ss_pred HHHHHHHH
Q 026967 176 ACVSYALE 183 (230)
Q Consensus 176 ~~a~~~a~ 183 (230)
...-.++.
T Consensus 70 sp~n~a~~ 77 (116)
T PF03610_consen 70 SPFNEAAR 77 (116)
T ss_dssp HHHHHHHH
T ss_pred ccchHHHH
Confidence 76555443
No 249
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=71.84 E-value=5.2 Score=32.78 Aligned_cols=37 Identities=24% Similarity=0.136 Sum_probs=29.6
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCC
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (230)
.-|.+++.||++...+........+...++.++..+.
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhceeEEeeecc
Confidence 4568999999998887765577788888888888775
No 250
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=68.46 E-value=51 Score=28.80 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=55.4
Q ss_pred CCcceEEEECCCCC--Ch---hhHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCC----------C-----CCCCHHHHHH
Q 026967 93 IQYKKFVLIHGEGF--GA---WCWYKTVASLEE-VGLIPTALDLKGSGIDLSDT----------N-----SVTTLAEYSK 151 (230)
Q Consensus 93 ~~~~~vvliHG~~~--~~---~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~----------~-----~~~~~~~~~~ 151 (230)
..+..|+++-|-.. +. .....+...|.. .+-+++++=-+|.|.--.+. . ....+...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 34567888887532 22 334456666766 57888888888887542110 0 0112223333
Q ss_pred HHHHHH-HhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 152 PLLDYL-ENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 152 ~l~~~l-~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
....+| ++..+...|+++|+|=|++.+--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 333333 445555699999999999988777654
No 251
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=67.42 E-value=14 Score=29.30 Aligned_cols=63 Identities=17% Similarity=0.262 Sum_probs=40.9
Q ss_pred CcceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 94 QYKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 94 ~~~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
..++++++||..... ..-..+.+.|.+.|..+...-+|+.|... .......++...+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~---~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGF---GNPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSST---TSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCC---CCchhHHHHHHHHHHHHHH
Confidence 468999999985532 34557888899999888777777655421 1122334566666666654
No 252
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=66.48 E-value=47 Score=24.06 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=50.6
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
.||.-|| .-+......++.+....-.+.++++. ...+..++...+.++++.....+.++++--=+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5677798 55666777777776543467777755 12467888888899998886555788887777887
Q ss_pred HHHH
Q 026967 177 CVSY 180 (230)
Q Consensus 177 ~a~~ 180 (230)
..-.
T Consensus 71 p~n~ 74 (122)
T cd00006 71 PNNA 74 (122)
T ss_pred HHHH
Confidence 6443
No 253
>PF03283 PAE: Pectinacetylesterase
Probab=65.45 E-value=19 Score=31.81 Aligned_cols=43 Identities=26% Similarity=0.418 Sum_probs=27.1
Q ss_pred HHHHh-cCCCCcEEEEEEchhHHHHHHHH----HhCCcccceEEEecc
Q 026967 155 DYLEN-LLEDEKVILVGHSSGGACVSYAL----EHFPQKISKAIFLCA 197 (230)
Q Consensus 155 ~~l~~-l~~~~~v~lvGhS~Gg~~a~~~a----~~~p~~v~~vv~i~~ 197 (230)
+++.+ +...++|+|.|.|.||+-++..+ ..+|..++-..+.++
T Consensus 146 ~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 146 DLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 34444 44446999999999999876654 446654444444444
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=65.11 E-value=8.5 Score=32.39 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHH
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
.+.+++..++.. +-.++|||+|-+.|+.++.
T Consensus 71 a~~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 71 ALARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 344556666665 8899999999998877664
No 255
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.60 E-value=9.5 Score=32.30 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=57.7
Q ss_pred CcceEEEECCCCCChhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHH--------HHHHHHhcCCC-
Q 026967 94 QYKKFVLIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKP--------LLDYLENLLED- 163 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~--------l~~~l~~l~~~- 163 (230)
..+.-+++-|-|.+...= ..+..-+.++|...+.+.-|-+|....+.... ..-+.+.| |.+....+.++
T Consensus 112 ~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~-~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 112 MADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQII-HMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred cCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHH-HHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 334455554444333211 23556666778999999999888653211111 11111222 22233333321
Q ss_pred ----CcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 164 ----EKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 164 ----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
.+..++|-||||.++..+...++.-|+-+=++++
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 4899999999999999998877654554444443
No 256
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=61.88 E-value=11 Score=31.84 Aligned_cols=31 Identities=19% Similarity=0.125 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHH
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
.+.+++...+.. +..++|||+|=+.|+.++.
T Consensus 65 al~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 444556666665 8899999999988877664
No 257
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=61.25 E-value=5.7 Score=34.05 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=22.8
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHH
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
.+.++++..+.. +-.++|||+|=+.|+.++.
T Consensus 73 al~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 73 ALARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 344556666655 8899999999888877654
No 258
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=60.61 E-value=18 Score=27.14 Aligned_cols=36 Identities=17% Similarity=0.407 Sum_probs=24.0
Q ss_pred CcceEEEECCCCCC-------------hhhHHH-----------HHHHHHHCCCeEEEeC
Q 026967 94 QYKKFVLIHGEGFG-------------AWCWYK-----------TVASLEEVGLIPTALD 129 (230)
Q Consensus 94 ~~~~vvliHG~~~~-------------~~~~~~-----------~~~~L~~~G~~vi~~D 129 (230)
...++||+||.-.+ .+.|.. .+..|.+.|++|+.+-
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvVW 115 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVVW 115 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEEE
Confidence 45689999997321 123532 4457888999998873
No 259
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=60.33 E-value=35 Score=32.32 Aligned_cols=64 Identities=20% Similarity=0.181 Sum_probs=43.4
Q ss_pred CCcceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 93 IQYKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
.-+.+++++||..... +.-..+.+.|..+|..|-..-+|+-|..-.. ..+..+....+.++++.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~---~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR---PENRVKVLKEILDWFKR 615 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC---chhHHHHHHHHHHHHHH
Confidence 3456899999986543 3456788899999999988888876644321 33455555666666654
No 260
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=59.77 E-value=26 Score=29.50 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=50.0
Q ss_pred cceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.|+||++.|+..+.. ....+...|..+|++|.++.-|- ..+..-..+-.+-.+++....|.|+=-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 479999999966543 56788899999999999997551 1122233455677788776688888777
Q ss_pred hhHH
Q 026967 173 SGGA 176 (230)
Q Consensus 173 ~Gg~ 176 (230)
|=+-
T Consensus 123 WY~~ 126 (264)
T TIGR03709 123 HYED 126 (264)
T ss_pred cccc
Confidence 7443
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.35 E-value=12 Score=31.20 Aligned_cols=30 Identities=23% Similarity=0.067 Sum_probs=21.9
Q ss_pred HHHHHHhcC-CCCcEEEEEEchhHHHHHHHHH
Q 026967 153 LLDYLENLL-EDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 153 l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
+.+.+...+ .. +..++|||+|=+.|+.++.
T Consensus 72 l~~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLK-PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCC-CCEEeecCHHHHHHHHHhC
Confidence 344555555 55 8899999999988877664
No 262
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=54.84 E-value=12 Score=29.39 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=24.8
Q ss_pred eEEEECCC---CCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 97 KFVLIHGE---GFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 97 ~vvliHG~---~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
.||++|-. ..+.+....+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 59999942 2234456789999999999988764
No 263
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=54.79 E-value=42 Score=27.65 Aligned_cols=71 Identities=14% Similarity=0.116 Sum_probs=51.4
Q ss_pred cceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 95 ~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.|+||++.|+..+.. .-..+...|-.+|+.|.++.-| . ..+..-..+-.+-..++....|.|+--|
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p------t------~eE~~~p~lwRfw~~lP~~G~i~IF~rS 97 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP------S------DRERTQWYFQRYVQHLPAAGEIVLFDRS 97 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------C------HHHHcChHHHHHHHhCCCCCeEEEEeCc
Confidence 479999999966543 5678888999999999998865 1 1222234466777888876688888888
Q ss_pred hhHHH
Q 026967 173 SGGAC 177 (230)
Q Consensus 173 ~Gg~~ 177 (230)
|=+-+
T Consensus 98 wY~~~ 102 (230)
T TIGR03707 98 WYNRA 102 (230)
T ss_pred hhhhH
Confidence 75443
No 264
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=53.30 E-value=19 Score=30.33 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=27.8
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
.||++|-...+......++..|.++||.++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 688999776667778889999999999988764
No 265
>COG3933 Transcriptional antiterminator [Transcription]
Probab=52.89 E-value=1.2e+02 Score=27.65 Aligned_cols=70 Identities=19% Similarity=0.136 Sum_probs=52.0
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
.+||+.||.. ++.+....+..|-.. --+.++|+| -..+..+..+.+.+.+++.... +=.++=-.||.
T Consensus 110 ~vIiiAHG~s-TASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~-~GlllLVDMGS 176 (470)
T COG3933 110 KVIIIAHGYS-TASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYR-SGLLLLVDMGS 176 (470)
T ss_pred eEEEEecCcc-hHHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCcc-CceEEEEecch
Confidence 4788999974 466777888887776 558899988 2346788889999999988776 43445568887
Q ss_pred HHH
Q 026967 176 ACV 178 (230)
Q Consensus 176 ~~a 178 (230)
...
T Consensus 177 L~~ 179 (470)
T COG3933 177 LTS 179 (470)
T ss_pred HHH
Confidence 754
No 266
>TIGR03586 PseI pseudaminic acid synthase.
Probab=52.54 E-value=1e+02 Score=26.86 Aligned_cols=81 Identities=16% Similarity=0.035 Sum_probs=50.0
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCC-eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS 172 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 172 (230)
.+.+|++--|+ .+-..|...++.+.+.|. .|+..... |..+. ...+.-......+++... -+|.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC~----s~YP~----~~~~~nL~~i~~lk~~f~-~pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKCT----SSYPA----PLEDANLRTIPDLAERFN-VPVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEecC----CCCCC----CcccCCHHHHHHHHHHhC-CCEEeeCCC
Confidence 45688899998 588899999999998887 56665532 22211 112221222334444332 378889999
Q ss_pred hhHHHHHHHHHh
Q 026967 173 SGGACVSYALEH 184 (230)
Q Consensus 173 ~Gg~~a~~~a~~ 184 (230)
.|-.+++.+...
T Consensus 203 ~G~~~~~aAva~ 214 (327)
T TIGR03586 203 LGILAPVAAVAL 214 (327)
T ss_pred CchHHHHHHHHc
Confidence 996666555544
No 267
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=51.97 E-value=17 Score=29.62 Aligned_cols=31 Identities=32% Similarity=0.254 Sum_probs=24.0
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCC
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
+.=||++|.|-+.+ +..|+++||.|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEecC
Confidence 34588899887764 55688899999999965
No 268
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=51.53 E-value=1.3e+02 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=23.7
Q ss_pred CcEEEEEEc-hhHHHHHHHHHhCCcccceEEEecccc
Q 026967 164 EKVILVGHS-SGGACVSYALEHFPQKISKAIFLCATM 199 (230)
Q Consensus 164 ~~v~lvGhS-~Gg~~a~~~a~~~p~~v~~vv~i~~~~ 199 (230)
.+|.|+|-. .|+.++..++.. .+..+++++.-.
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d~ 169 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHDV 169 (376)
T ss_pred CcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCCE
Confidence 489999875 566666666653 478888888763
No 269
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=50.21 E-value=22 Score=28.94 Aligned_cols=34 Identities=26% Similarity=0.274 Sum_probs=27.1
Q ss_pred ceEEEECCC-CCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 96 KKFVLIHGE-GFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 96 ~~vvliHG~-~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
..||++|.. ..+.+....+++.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 368999975 4455678889999999999988764
No 270
>PRK14974 cell division protein FtsY; Provisional
Probab=48.30 E-value=1.8e+02 Score=25.44 Aligned_cols=71 Identities=20% Similarity=0.154 Sum_probs=42.9
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCC--cccceEEE
Q 026967 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP--QKISKAIF 194 (230)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~vv~ 194 (230)
.....|+.++.+|-+|.... -......+..+.+....+ .+++|.-+.-|.-+...+..+. -.+.++|+
T Consensus 217 ~~~~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HHHhCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 34456889999998865532 133445555555555555 6667766666665665555442 35778887
Q ss_pred ecc
Q 026967 195 LCA 197 (230)
Q Consensus 195 i~~ 197 (230)
---
T Consensus 287 TKl 289 (336)
T PRK14974 287 TKV 289 (336)
T ss_pred eee
Confidence 533
No 271
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=47.30 E-value=58 Score=26.61 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=28.1
Q ss_pred cceEEEECCCCCChhh--H-HHHHHHHHHCCCeEEEeCCC
Q 026967 95 YKKFVLIHGEGFGAWC--W-YKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~--~-~~~~~~L~~~G~~vi~~D~~ 131 (230)
.+.|.|++=.+...+. | .+..+.|.+.|+.|.-+++-
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 5789999877655443 3 46778899999999888755
No 272
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=46.86 E-value=71 Score=24.60 Aligned_cols=35 Identities=14% Similarity=-0.029 Sum_probs=25.7
Q ss_pred cceEEEECCCCCChhh-H-HHHHHHHHHCCCeEEEeC
Q 026967 95 YKKFVLIHGEGFGAWC-W-YKTVASLEEVGLIPTALD 129 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~-~-~~~~~~L~~~G~~vi~~D 129 (230)
++.+|++-|+.++... . ..+.+.|.+.|+.|+.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 3679999999776543 2 457778888999999997
No 273
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=46.73 E-value=1.7e+02 Score=25.58 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=27.0
Q ss_pred EEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCC
Q 026967 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSG 134 (230)
Q Consensus 98 vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G 134 (230)
|||+|...- ..|..+++.|.++|+.|..+-..+.+
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~ 36 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAA 36 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCC
Confidence 788987533 35888999999999999887655544
No 274
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=46.33 E-value=1.8e+02 Score=24.52 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=41.9
Q ss_pred HHHHHH-CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC-CcccceE
Q 026967 115 VASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF-PQKISKA 192 (230)
Q Consensus 115 ~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~-p~~v~~v 192 (230)
+..+.+ .++.++.+|-+|..... ......+..++........+.++.-++++.-+...+..| +-.++++
T Consensus 146 l~~l~~~~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~ 216 (270)
T PRK06731 146 LTYFKEEARVDYILIDTAGKNYRA---------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGI 216 (270)
T ss_pred HHHHHhcCCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEE
Confidence 334443 36899999988775321 233445555665555542333455566776666666554 3457777
Q ss_pred EEe
Q 026967 193 IFL 195 (230)
Q Consensus 193 v~i 195 (230)
|+-
T Consensus 217 I~T 219 (270)
T PRK06731 217 VFT 219 (270)
T ss_pred EEE
Confidence 774
No 275
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=46.30 E-value=40 Score=24.71 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=23.0
Q ss_pred CcceEEEECCCC-C------------ChhhHHH-----------HHHHHHHCCCeEEEe
Q 026967 94 QYKKFVLIHGEG-F------------GAWCWYK-----------TVASLEEVGLIPTAL 128 (230)
Q Consensus 94 ~~~~vvliHG~~-~------------~~~~~~~-----------~~~~L~~~G~~vi~~ 128 (230)
+...+|||||.- . +.+.|.. ..+.|.+.|+.|+.+
T Consensus 55 ~~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 55 EYRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred CCCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 456899998862 1 1233432 335788899999876
No 276
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=46.25 E-value=38 Score=28.88 Aligned_cols=52 Identities=19% Similarity=0.291 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEEchhHHHHHHHH---HhCCcccceEEEecccc
Q 026967 148 EYSKPLLDYLENLLED--EKVILVGHSSGGACVSYAL---EHFPQKISKAIFLCATM 199 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~--~~v~lvGhS~Gg~~a~~~a---~~~p~~v~~vv~i~~~~ 199 (230)
...+.+.+.+..+..+ -|++|.|-|+|++-+..+- ...-++++++++.+++.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 3445555556666542 4899999999988655443 22335699999888764
No 277
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=46.16 E-value=71 Score=28.67 Aligned_cols=38 Identities=11% Similarity=-0.026 Sum_probs=26.4
Q ss_pred ceEEEECCCCCChhh--HHHHHHHHHHCCCeEEEe--CCCCCC
Q 026967 96 KKFVLIHGEGFGAWC--WYKTVASLEEVGLIPTAL--DLKGSG 134 (230)
Q Consensus 96 ~~vvliHG~~~~~~~--~~~~~~~L~~~G~~vi~~--D~~G~G 134 (230)
..|+++.|+|++... +..+.+.+++. |.|+++ ++-|.|
T Consensus 36 aIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~ 77 (403)
T PF11144_consen 36 AIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFC 77 (403)
T ss_pred EEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeehee
Confidence 367888999998874 34677778876 766655 566655
No 278
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=44.92 E-value=1.8e+02 Score=24.23 Aligned_cols=35 Identities=17% Similarity=0.144 Sum_probs=23.7
Q ss_pred EEEECCC--CCChhhHHHHHHHHHHCCCeEEEeCCCC
Q 026967 98 FVLIHGE--GFGAWCWYKTVASLEEVGLIPTALDLKG 132 (230)
Q Consensus 98 vvliHG~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (230)
+++++|. |+.......+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4455654 3444456678999999999888776544
No 279
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=44.88 E-value=63 Score=25.70 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=37.0
Q ss_pred cceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 95 ~~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
..+|+++||-....- ......+.|.+.|.+|-...++|.|.+. ..+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhh
Confidence 458999999866432 3456888999999988888888766432 24556677777654
No 280
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=44.26 E-value=28 Score=28.60 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=22.1
Q ss_pred EEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCC
Q 026967 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 98 vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
=||+.|.|.+.+ +.+|+++||.|+++|+-
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 567777776553 45688899999999975
No 281
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=43.99 E-value=2.4e+02 Score=25.28 Aligned_cols=74 Identities=11% Similarity=0.003 Sum_probs=41.9
Q ss_pred cceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCcEE
Q 026967 95 YKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKGS---GIDLSDTNSVTTLAEYSKPLLDYLENLLE-DEKVI 167 (230)
Q Consensus 95 ~~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~l~~l~~-~~~v~ 167 (230)
+.++|+++-....- ......+..|.+.|+.|+-|+ +|. |... .....+.++.+..+..++..... +.++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 35677776542221 134567778888899988664 332 3221 22344667777777766643222 34677
Q ss_pred EEEE
Q 026967 168 LVGH 171 (230)
Q Consensus 168 lvGh 171 (230)
+.|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 7776
No 282
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=43.67 E-value=2.4e+02 Score=25.20 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=42.6
Q ss_pred ceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHh---cCCCCcEE
Q 026967 96 KKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKG--SGIDLSDTNSVTTLAEYSKPLLDYLEN---LLEDEKVI 167 (230)
Q Consensus 96 ~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~ 167 (230)
.++|+++-..... ......+..|.+.|+.|+-+..-- +|... .....+.++.+..+...+.. +. +.++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~~-~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDLE-GKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhccccC-CceEE
Confidence 4677776543222 244567778888898877665221 23221 23345677777777777654 32 33677
Q ss_pred EEEE
Q 026967 168 LVGH 171 (230)
Q Consensus 168 lvGh 171 (230)
+.|-
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 7666
No 283
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=42.27 E-value=99 Score=22.66 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=19.8
Q ss_pred CCChhhHHHHHHHHHHCCCeEEEeCCC
Q 026967 105 GFGAWCWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 105 ~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
|+.......++..|.++|+.|..+-..
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 444556778999999999998888443
No 284
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=42.14 E-value=1.6e+02 Score=24.51 Aligned_cols=40 Identities=13% Similarity=0.108 Sum_probs=26.4
Q ss_pred CCCcceEEEECCCCCCh-hhHHHHHHHHHHCCCe-EEEeCCC
Q 026967 92 NIQYKKFVLIHGEGFGA-WCWYKTVASLEEVGLI-PTALDLK 131 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~-~~~~~~~~~L~~~G~~-vi~~D~~ 131 (230)
.+..+.|+|++-..... +.+..+.+.|.+.|+. |-.++..
T Consensus 25 g~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 25 GGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 34456888888655544 3456677788888984 5556654
No 285
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=42.05 E-value=1.1e+02 Score=23.80 Aligned_cols=59 Identities=12% Similarity=0.122 Sum_probs=40.7
Q ss_pred CCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCC------CCCCHHHHHHHHHHHHHhcCCC
Q 026967 105 GFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTN------SVTTLAEYSKPLLDYLENLLED 163 (230)
Q Consensus 105 ~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~l~~~ 163 (230)
..+...|...+..+.+.|++.+.+..-|++.....+. ......+.+..+.+..++.+..
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 4456789999999999999999998888776532111 1123346667777777776653
No 286
>PRK09936 hypothetical protein; Provisional
Probab=41.64 E-value=1.1e+02 Score=26.32 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=27.7
Q ss_pred ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCC
Q 026967 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDL 137 (230)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~ 137 (230)
+...|..+...+...|++.+.+.+.++|.++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~ 66 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDAD 66 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCC
Confidence 4557999999999999999999999999874
No 287
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=40.97 E-value=1.1e+02 Score=26.64 Aligned_cols=63 Identities=16% Similarity=0.012 Sum_probs=36.4
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
..+||.+-|+-.++ --+..|+++||.|..+-+..+- +..+.......+...+|+..+-++|++
T Consensus 6 ~~VvvamSgGVDSs----Vaa~Ll~~~g~~v~gv~M~nWd-~~de~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSS----VAARLLAARGYNVTGVFMKNWD-SLDEFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred ceEEEEecCCchHH----HHHHHHHhcCCCeeEEeeeccc-cccccccCCCchhhHHHHHHHHHHhCC
Confidence 34677777764443 2455778899999988777652 211122233445555555555555544
No 288
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=40.72 E-value=1.5e+02 Score=26.23 Aligned_cols=84 Identities=15% Similarity=0.261 Sum_probs=52.9
Q ss_pred eEEEECCCCCCh-------hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 97 KFVLIHGEGFGA-------WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 97 ~vvliHG~~~~~-------~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
-+|++|....+. +.|.++.+.+.+. --+-.+|+..+|..+. ++...+..+.-+++. + .-+++
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG------~~d~DA~avR~F~~~-g---~~~~l 267 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASG------DLDKDAQAVRLFVED-G---HEILL 267 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccC------CchhhHHHHHHHHHc-C---CceEe
Confidence 589999886655 4799999888876 3345568777776543 445556666666654 2 23566
Q ss_pred EEchhHHHHHHHHHhCCcccceEEEec
Q 026967 170 GHSSGGACVSYALEHFPQKISKAIFLC 196 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~p~~v~~vv~i~ 196 (230)
.-|+--.+.+ |.+++.++-.++
T Consensus 268 aQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 268 AQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred ehhhhhhcch-----hhhccceeEEEe
Confidence 6666544433 446666665554
No 289
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=40.41 E-value=1.6e+02 Score=25.59 Aligned_cols=81 Identities=19% Similarity=0.023 Sum_probs=49.4
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCe---EEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLI---PTALDLKGSGIDLSD-TNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~---vi~~D~~G~G~S~~~-~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
.+.+||+--|+ .+-..|...++.+.+.|.. ++..... |..+ +....++. ....+++... .+|.+-
T Consensus 132 ~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC~----s~YP~~~~~~nL~-----~I~~Lk~~f~-~pVG~S 200 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHCT----TEYPAPFEDVNLN-----AMDTLKEAFD-LPVGYS 200 (329)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEEC----CCCCCCcccCCHH-----HHHHHHHHhC-CCEEEC
Confidence 45678899998 5788999999999988864 5554432 2111 11222222 2223443332 388888
Q ss_pred EEchhHHHHHHHHHhC
Q 026967 170 GHSSGGACVSYALEHF 185 (230)
Q Consensus 170 GhS~Gg~~a~~~a~~~ 185 (230)
+|+.|-.++..+....
T Consensus 201 dHt~G~~~~~aAvalG 216 (329)
T TIGR03569 201 DHTLGIEAPIAAVALG 216 (329)
T ss_pred CCCccHHHHHHHHHcC
Confidence 9999976665555543
No 290
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=40.23 E-value=46 Score=28.61 Aligned_cols=61 Identities=18% Similarity=0.086 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 110 CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+|..+++.|... -.-++++ |=| ..--...-+.+.|++.+.. .-.++|-|+|+.++..++..
T Consensus 3 d~~rl~r~l~~~-~~gLvL~--GGG----------~RG~ahiGvL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 3 DFSRLARVLTGN-SIALVLG--GGG----------ARGCAHIGVIKALEEAGIP-VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred hHHHHHHHhcCC-CEEEEEC--ChH----------HHHHHHHHHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcC
Confidence 566777777765 2233333 111 1122233455566666665 56889999999998888765
No 291
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=39.21 E-value=1.9e+02 Score=22.87 Aligned_cols=76 Identities=21% Similarity=0.116 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC-C-c
Q 026967 110 CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHF-P-Q 187 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~-p-~ 187 (230)
......+.+..+++.++.+|-+|... .-......+..+++..... .+++|=-+..+.-.+..+..+ . -
T Consensus 71 ~~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~~~ 140 (196)
T PF00448_consen 71 IAREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYEAF 140 (196)
T ss_dssp HHHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhhcc
Confidence 34456667777889999999886652 2355667777788777666 555554444444444333322 2 2
Q ss_pred ccceEEEe
Q 026967 188 KISKAIFL 195 (230)
Q Consensus 188 ~v~~vv~i 195 (230)
.+.++|+-
T Consensus 141 ~~~~lIlT 148 (196)
T PF00448_consen 141 GIDGLILT 148 (196)
T ss_dssp STCEEEEE
T ss_pred cCceEEEE
Confidence 47888864
No 292
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=39.07 E-value=54 Score=25.21 Aligned_cols=33 Identities=15% Similarity=0.040 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
-+.+.|++.+.. .-.++|-|.|+.++..++...
T Consensus 15 Gvl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 15 GVAKALRERGPL-IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 344455554554 668999999999998888653
No 293
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=38.78 E-value=37 Score=31.72 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=23.7
Q ss_pred HHHHH-HhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 153 LLDYL-ENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 153 l~~~l-~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
+.+++ +..+.. +-.++|||+|=+.++.+|.-.
T Consensus 254 La~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 33445 356665 789999999999888887654
No 294
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=38.75 E-value=1.7e+02 Score=24.11 Aligned_cols=87 Identities=16% Similarity=0.192 Sum_probs=47.0
Q ss_pred CcceEEEECCCCC--ChhhH-HHHHHHHHHCCCeEEEeCCCCCCC---CCCCC---CCCC--CHHHHH--HHHHHHHHhc
Q 026967 94 QYKKFVLIHGEGF--GAWCW-YKTVASLEEVGLIPTALDLKGSGI---DLSDT---NSVT--TLAEYS--KPLLDYLENL 160 (230)
Q Consensus 94 ~~~~vvliHG~~~--~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~---S~~~~---~~~~--~~~~~~--~~l~~~l~~l 160 (230)
+.+.|+||+=... ....| ..+.+.+.+.|+.|..++...--. ...+. .... .+.... ..+.+.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 4578999987653 33343 446678888999999888662100 00000 0111 111111 1233334333
Q ss_pred CCCCcEEEEEEchhHHHHHHH
Q 026967 161 LEDEKVILVGHSSGGACVSYA 181 (230)
Q Consensus 161 ~~~~~v~lvGhS~Gg~~a~~~ 181 (230)
-. +...++|.|.|+.++..-
T Consensus 110 ~~-~G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 110 VK-NGTPYIGWSAGANVAGPT 129 (233)
T ss_pred HH-CCCEEEEECHHHHhhhcc
Confidence 22 257899999999885543
No 295
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=38.60 E-value=73 Score=20.96 Aligned_cols=32 Identities=25% Similarity=0.191 Sum_probs=18.1
Q ss_pred cceEEEECCCC-CChhhHHHHHHHHHHCCCeEEEe
Q 026967 95 YKKFVLIHGEG-FGAWCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 95 ~~~vvliHG~~-~~~~~~~~~~~~L~~~G~~vi~~ 128 (230)
.|.++++||.. -..+... .+.-.++|+.++.+
T Consensus 31 ~~~~~lvhGga~~GaD~iA--~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGADRIA--ARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCCCCHHHHH--HHHHHHCCCeeEEe
Confidence 36788999986 4444331 11224457766654
No 296
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=38.21 E-value=2.5e+02 Score=23.90 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=25.2
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCC
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKG 132 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G 132 (230)
.+++..|.+++-..+..++..|.+.|+.|..+-..+
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 344445666655556789999999999988875433
No 297
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=38.03 E-value=2e+02 Score=22.76 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=23.7
Q ss_pred cceEEEECCCCCChhh------HHHHHHHHHHCCCeEEEeC
Q 026967 95 YKKFVLIHGEGFGAWC------WYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~------~~~~~~~L~~~G~~vi~~D 129 (230)
+++|||.|-..++.-+ +..+.+.+.++|..|+++.
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS 66 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLS 66 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 4567777765544332 4556677888899999986
No 298
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.97 E-value=32 Score=28.45 Aligned_cols=26 Identities=31% Similarity=0.617 Sum_probs=17.1
Q ss_pred HHHHhcCCCCcEEEEEEchhHHHHHH
Q 026967 155 DYLENLLEDEKVILVGHSSGGACVSY 180 (230)
Q Consensus 155 ~~l~~l~~~~~v~lvGhS~Gg~~a~~ 180 (230)
.+++.+.....|+++|||+|..=-.+
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEVDYPY 251 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchhhHHH
Confidence 33444444359999999999874333
No 299
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=37.92 E-value=68 Score=24.74 Aligned_cols=51 Identities=14% Similarity=0.107 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhcCC-CCcEEEEEEchhHHHHHHHHHhCCcccceEEEecc
Q 026967 147 AEYSKPLLDYLENLLE-DEKVILVGHSSGGACVSYALEHFPQKISKAIFLCA 197 (230)
Q Consensus 147 ~~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~i~~ 197 (230)
.+..+.+.++|+.+.. ..+|++.|-|..|.+.+.++...++.|..+|=.++
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3344455566655533 35799999999999988888765665666654443
No 300
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=37.72 E-value=57 Score=25.39 Aligned_cols=32 Identities=22% Similarity=0.142 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
+.+.|++.+.. .-.++|-|.|+.++..++...
T Consensus 17 vl~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGIL-KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCC-cceEEEECHHHHHHHHHHcCC
Confidence 33344444443 458899999999998888643
No 301
>PRK10279 hypothetical protein; Provisional
Probab=37.12 E-value=53 Score=28.16 Aligned_cols=33 Identities=15% Similarity=0.055 Sum_probs=23.5
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
-+.+.|++.+.. .-.++|-|+|+.++..+|...
T Consensus 22 GVL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKVGIE-IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCC
Confidence 344555555555 668999999999988887543
No 302
>PRK11168 glpC sn-glycerol-3-phosphate dehydrogenase subunit C; Provisional
Probab=36.98 E-value=1.6e+02 Score=25.95 Aligned_cols=42 Identities=19% Similarity=0.082 Sum_probs=28.5
Q ss_pred cceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeCCCCCCCC
Q 026967 95 YKKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALDLKGSGID 136 (230)
Q Consensus 95 ~~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D~~G~G~S 136 (230)
+..|+|++|..... +.-...+..|...|+.|+.++..-+|..
T Consensus 161 ~~~v~~f~gC~~~~~~p~~~~a~~~lL~~~G~~v~~~~~~CCG~p 205 (396)
T PRK11168 161 KKQVAYFHGCYVNYNHPQLGKDLVKVLNAMGYEVLLPKEKCCGLP 205 (396)
T ss_pred CCeEEEECccccccCCcHHHHHHHHHHHHCCCEEEcCCCCccChh
Confidence 34799999975432 3345677789999999966665455643
No 303
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=36.08 E-value=3.4e+02 Score=24.69 Aligned_cols=70 Identities=17% Similarity=0.224 Sum_probs=41.5
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCc--ccceE
Q 026967 115 VASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQ--KISKA 192 (230)
Q Consensus 115 ~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~v 192 (230)
++.+...+|.++.+|-+|.-. .-......+..+.+....+ .+++|--++-|.-+...+..+-+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 344555689999999887432 1233445555555555555 56666666656555555554422 36666
Q ss_pred EE
Q 026967 193 IF 194 (230)
Q Consensus 193 v~ 194 (230)
|+
T Consensus 245 Il 246 (429)
T TIGR01425 245 II 246 (429)
T ss_pred EE
Confidence 66
No 304
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=35.92 E-value=55 Score=27.92 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
+.+.|++.+.. .-.|.|-|+|+.++..+|..
T Consensus 29 Vl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALEEAGIP-IDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHHHcCCC-ccEEEecCHHHHHHHHHHcC
Confidence 33444444444 67899999999998888764
No 305
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=35.42 E-value=3e+02 Score=23.91 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHH
Q 026967 143 VTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGAC 177 (230)
Q Consensus 143 ~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 177 (230)
.....+.+..+...++......+++|+=|+.=|..
T Consensus 116 ~~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 116 PKSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred cCCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 34667777788888887763459999999998775
No 306
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=35.27 E-value=29 Score=28.53 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=43.0
Q ss_pred cceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHhcCCCCcEEEEEE
Q 026967 95 YKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYS-KPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 95 ~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~~l~~l~~~~~v~lvGh 171 (230)
.|+||++.|+.++.. .-..+...|-.+|++|.++.-| +-++.. ..+-.+-.+++....+.|+=-
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~G~I~if~r 96 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP-------------TDEELRRPFLWRFWRALPARGQIGIFDR 96 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--TT-EEEEES
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC-------------ChhHcCCCcHHHHHHhCCCCCEEEEEec
Confidence 468999999977654 3567778888889999999866 122222 235567777877668888888
Q ss_pred chhHH
Q 026967 172 SSGGA 176 (230)
Q Consensus 172 S~Gg~ 176 (230)
||=.-
T Consensus 97 SWY~~ 101 (228)
T PF03976_consen 97 SWYED 101 (228)
T ss_dssp -GGGG
T ss_pred chhhH
Confidence 87443
No 307
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=35.25 E-value=54 Score=26.61 Aligned_cols=28 Identities=25% Similarity=0.189 Sum_probs=18.5
Q ss_pred EEECCCCCChhhHHHHHHHHHHCCCeEEEeCCC
Q 026967 99 VLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 99 vliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
||..|.|.+. -+..|+++|+.|+++|.-
T Consensus 41 vL~~gCG~G~-----da~~LA~~G~~V~avD~s 68 (218)
T PRK13255 41 VLVPLCGKSL-----DMLWLAEQGHEVLGVELS 68 (218)
T ss_pred EEEeCCCChH-----hHHHHHhCCCeEEEEccC
Confidence 4444544433 344567889999999965
No 308
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=34.87 E-value=69 Score=27.66 Aligned_cols=32 Identities=19% Similarity=0.066 Sum_probs=22.1
Q ss_pred HHHHHHHhcC-CCCcEEEEEEchhHHHHHHHHH
Q 026967 152 PLLDYLENLL-EDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 152 ~l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
.+...+...+ ...+.++.|||+|=+.|+.++.
T Consensus 72 a~~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 72 AAYRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 3344444444 3458899999999988877665
No 309
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=34.62 E-value=3.4e+02 Score=24.38 Aligned_cols=38 Identities=11% Similarity=-0.015 Sum_probs=28.1
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS 133 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~ 133 (230)
.++-|++||...... ...+...+.+.|..|++-++..+
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~ 303 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKV 303 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEecccc
Confidence 467899999866554 34556677788999999977754
No 310
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=34.56 E-value=1.3e+02 Score=27.80 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=51.5
Q ss_pred CcceEEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 94 QYKKFVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
+.+.||++.|+.++.. ....+...|..+|++|.++..|.. .+..-..+-.+..+++....|.|+--
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~~------------eE~~~~flwRfw~~lP~~G~I~IFdR 105 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPSD------------EERERPPMWRFWRRLPPKGKIGIFFG 105 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCCH------------HHhcCcHHHHHHHhCCCCCeEEEEcC
Confidence 4578999999966543 567899999999999999987711 12222345567778877668888888
Q ss_pred chhHHH
Q 026967 172 SSGGAC 177 (230)
Q Consensus 172 S~Gg~~ 177 (230)
||=+-+
T Consensus 106 SWY~~v 111 (493)
T TIGR03708 106 SWYTRP 111 (493)
T ss_pred cccchh
Confidence 874443
No 311
>PHA02114 hypothetical protein
Probab=34.49 E-value=56 Score=23.19 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=28.1
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
-+||+=-.+..+...|-..+..|++.||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 3677666677788889999999999999999864
No 312
>COG0218 Predicted GTPase [General function prediction only]
Probab=34.36 E-value=56 Score=26.32 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=14.8
Q ss_pred ceEEEECCCCCCh------hhHHHHH-HHHHHC
Q 026967 96 KKFVLIHGEGFGA------WCWYKTV-ASLEEV 121 (230)
Q Consensus 96 ~~vvliHG~~~~~------~~~~~~~-~~L~~~ 121 (230)
-.+|=++|+|+.. +.|..++ ++|..+
T Consensus 72 ~~lVDlPGYGyAkv~k~~~e~w~~~i~~YL~~R 104 (200)
T COG0218 72 LRLVDLPGYGYAKVPKEVKEKWKKLIEEYLEKR 104 (200)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHHHhhc
Confidence 3456668887654 3466544 455554
No 313
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=34.19 E-value=1.9e+02 Score=24.66 Aligned_cols=77 Identities=23% Similarity=0.257 Sum_probs=43.5
Q ss_pred EEEECCCCCChh-hHHHHHHHHHHCCC-------eEEEeCCCCCCCCCCCCCCCCCHHHHH--------HHHHHHHHhcC
Q 026967 98 FVLIHGEGFGAW-CWYKTVASLEEVGL-------IPTALDLKGSGIDLSDTNSVTTLAEYS--------KPLLDYLENLL 161 (230)
Q Consensus 98 vvliHG~~~~~~-~~~~~~~~L~~~G~-------~vi~~D~~G~G~S~~~~~~~~~~~~~~--------~~l~~~l~~l~ 161 (230)
-|++.|.|...- .-+.+...+...|. +++.+|..|-=..+.+. ....-..++ .++.++++.++
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~-l~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD-LTPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc-chHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 345556655443 34456666677787 89999998843222111 111111222 24666666665
Q ss_pred CCCcEEEEEEch-hHHHH
Q 026967 162 EDEKVILVGHSS-GGACV 178 (230)
Q Consensus 162 ~~~~v~lvGhS~-Gg~~a 178 (230)
. -+|+|-|- ||.+.
T Consensus 106 p---tvlIG~S~~~g~ft 120 (279)
T cd05312 106 P---TVLIGLSGVGGAFT 120 (279)
T ss_pred C---CEEEEeCCCCCCCC
Confidence 4 49999995 66643
No 314
>TIGR03379 glycerol3P_GlpC glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species.
Probab=33.81 E-value=2.4e+02 Score=24.88 Aligned_cols=40 Identities=18% Similarity=0.146 Sum_probs=27.6
Q ss_pred ceEEEECCCCCCh---hhHHHHHHHHHHCCCeEEEeC-CCCCCC
Q 026967 96 KKFVLIHGEGFGA---WCWYKTVASLEEVGLIPTALD-LKGSGI 135 (230)
Q Consensus 96 ~~vvliHG~~~~~---~~~~~~~~~L~~~G~~vi~~D-~~G~G~ 135 (230)
..|+|+.|...+. +.-...++.|.+.|+.|+.+. ..-+|.
T Consensus 162 ~~V~~f~gC~~~~~~~~~~~a~v~vL~~~G~~v~~~~~~~CCG~ 205 (397)
T TIGR03379 162 RQVAYFHGCYVNYNHPQLGKDLVKVLNAMNIGVQLLEKEKCCGV 205 (397)
T ss_pred CcEEEeCCcccccCChHHHHHHHHHHHHCCcEEEeCCCCCccCc
Confidence 4788898874432 233567788999999998875 444564
No 315
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.73 E-value=1.8e+02 Score=27.04 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=49.8
Q ss_pred EECCCCCChhhH-HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHH
Q 026967 100 LIHGEGFGAWCW-YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACV 178 (230)
Q Consensus 100 liHG~~~~~~~~-~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (230)
|--|+|.+.... ..-+++-..+||.|+.+|-.|--... ......+..+++.-.++ .|+.||--+=|.-+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~---------~~lm~~l~k~~~~~~pd-~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN---------APLMTSLAKLIKVNKPD-LILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC---------hhHHHHHHHHHhcCCCc-eEEEehhhhhCcHH
Confidence 334554443332 23455666789999999977544221 22334555666655666 88888888777755
Q ss_pred HHHHHh---------CCcccceEEEe
Q 026967 179 SYALEH---------FPQKISKAIFL 195 (230)
Q Consensus 179 ~~~a~~---------~p~~v~~vv~i 195 (230)
+.-+.. .|..|+++++-
T Consensus 513 v~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 513 VDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHhcCCCccccceEEEE
Confidence 443332 23456666653
No 316
>PRK11460 putative hydrolase; Provisional
Probab=33.73 E-value=2.3e+02 Score=22.91 Aligned_cols=42 Identities=19% Similarity=0.009 Sum_probs=28.8
Q ss_pred CcceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeCCCCCCC
Q 026967 94 QYKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALDLKGSGI 135 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D~~G~G~ 135 (230)
..++|+++||-....- .-..+.+.|.+.|..+....++|.|.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH 191 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGH 191 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCC
Confidence 3568999999866432 34567788888887776666665553
No 317
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=33.61 E-value=64 Score=24.93 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.5
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEe
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (230)
..+.|+++-|-|.+..+=.-.+++|...|+.|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 45677777777776666567889999999998883
No 318
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=33.21 E-value=56 Score=26.40 Aligned_cols=18 Identities=28% Similarity=0.285 Sum_probs=14.1
Q ss_pred HHHHHHHCCCeEEEeCCC
Q 026967 114 TVASLEEVGLIPTALDLK 131 (230)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~ 131 (230)
-+..|+++|+.|+++|.-
T Consensus 48 da~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 48 DLAWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHHHhCCCeEEEEeCC
Confidence 345677899999999964
No 319
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=33.07 E-value=70 Score=26.96 Aligned_cols=32 Identities=19% Similarity=0.034 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 152 PLLDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 152 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
-+.+.+++.+.. --.++|-|+|+.++..+|..
T Consensus 27 GVL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 27 GILQALEEAGIP-IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHcCCC-ccEEEEECHHHHHHHHHHcC
Confidence 445555555554 55789999999998888764
No 320
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=32.39 E-value=85 Score=25.45 Aligned_cols=31 Identities=16% Similarity=0.112 Sum_probs=21.3
Q ss_pred HHHHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
...|++.+.. .-.++|-|.|+.++..++...
T Consensus 19 L~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 3334444443 447999999999998888643
No 321
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=32.23 E-value=3.2e+02 Score=23.28 Aligned_cols=89 Identities=12% Similarity=-0.015 Sum_probs=51.1
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
-.||+-.|+... .-..+.+...+.|.+++.|+..|.=.... ....++. . .+....+|.++..|-+=
T Consensus 90 ~avIis~Gf~e~--~~~~l~~~a~~~girilGPNc~Giin~~~--~~~~~~~---~-------~~~~~G~ValiSQSG~l 155 (286)
T TIGR01019 90 LIVCITEGIPVH--DMLKVKRYMEESGTRLIGPNCPGIITPGE--CKIGIMP---G-------HIHKPGNVGIVSRSGTL 155 (286)
T ss_pred EEEEECCCCCHH--HHHHHHHHHHHcCCEEECCCCceEEcccc--cceeecc---c-------cCCCCCcEEEEeccHHH
Confidence 356666776443 22456677778899999999988643211 0000110 0 01122378888888763
Q ss_pred H-HHHHHHHhCCcccceEEEeccc
Q 026967 176 A-CVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 176 ~-~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
. ..+.++....-.+..+|.++.-
T Consensus 156 ~~~~~~~a~~~giG~S~~Vs~Gn~ 179 (286)
T TIGR01019 156 TYEAVHQLTKAGFGQSTCVGIGGD 179 (286)
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3 3344455555567778777655
No 322
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=32.12 E-value=3.5e+02 Score=23.71 Aligned_cols=72 Identities=11% Similarity=-0.062 Sum_probs=44.0
Q ss_pred EEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 98 FVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 98 vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
+++++|...+.++...+++.+...+..|-.+-+--.|.+....+ + .+......+++...+.. +.+..|.|-=
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~p---s-~e~i~~f~~~L~~~Gi~---vtvR~~~G~d 331 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQRP---S-PKRIQAFQRVLEQRGVA---VSVRASRGLD 331 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCCCC---C-HHHHHHHHHHHHHCCCe---EEEeCCCCCc
Confidence 78999999999999999998876544444333322333322111 2 33345556666665544 5678888843
No 323
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.10 E-value=3e+02 Score=22.98 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=32.7
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCC
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGS 133 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~ 133 (230)
..+.+|++=-|...+.+.|...++.+.+.|..=+++=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 34578999999889999999999999998875455555554
No 324
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=32.09 E-value=1.9e+02 Score=20.72 Aligned_cols=72 Identities=15% Similarity=0.098 Sum_probs=49.8
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
.||.-||- -+..+...++.+....-.+.++++. ...+.+++.+.+.++++.+..++.++++--=+||.
T Consensus 4 ili~sHG~--~A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQ--AAIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHH--HHHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 56777985 4455556666665433457777654 23467888889999999887656899898888888
Q ss_pred HHHH
Q 026967 177 CVSY 180 (230)
Q Consensus 177 ~a~~ 180 (230)
..-.
T Consensus 72 p~n~ 75 (116)
T TIGR00824 72 PYNA 75 (116)
T ss_pred HHHH
Confidence 6433
No 325
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=31.79 E-value=1.9e+02 Score=25.13 Aligned_cols=82 Identities=24% Similarity=0.174 Sum_probs=46.6
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHhcCCCC-----cEEEEEEch----------
Q 026967 114 TVASLEEVGLIPTALDLKGSGIDLSDT-----NSVTTLAEYSKPLLDYLENLLEDE-----KVILVGHSS---------- 173 (230)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~l~~~l~~l~~~~-----~v~lvGhS~---------- 173 (230)
.+..|.+.||.|+.+|--..|....-. ....++.| ..-+.+++++..++. -...||-|+
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhc
Confidence 455666689999999988776543111 11112222 235666676666551 223456664
Q ss_pred -hHHH-HHHHHHhCCcccceEEEeccc
Q 026967 174 -GGAC-VSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 174 -Gg~~-a~~~a~~~p~~v~~vv~i~~~ 198 (230)
+|.+ .+.++..+ .|+.+||-+..
T Consensus 95 v~gTl~Ll~am~~~--gv~~~vFSStA 119 (329)
T COG1087 95 VVGTLNLIEAMLQT--GVKKFIFSSTA 119 (329)
T ss_pred hHhHHHHHHHHHHh--CCCEEEEecch
Confidence 3333 44455543 49999987765
No 326
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=31.30 E-value=1.6e+02 Score=26.47 Aligned_cols=60 Identities=13% Similarity=0.009 Sum_probs=35.9
Q ss_pred HHHHHHHCC--CeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 114 TVASLEEVG--LIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 114 ~~~~L~~~G--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
+++.+.++| |.||.+|.|.++.+.... ..-..++.+-+...++-+..+ -++++.-+....
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~--~~~~rdy~~l~~~~~~iL~pg-G~l~~~s~~~~~ 341 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE--FSAQRDYKDLNDLALRLLAPG-GTLVTSSCSRHF 341 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc--hhHHHHHHHHHHHHHHHcCCC-CEEEEEecCCcc
Confidence 455566644 999999999999886422 223344444444445555554 566555544443
No 327
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=30.96 E-value=3.2e+02 Score=24.97 Aligned_cols=70 Identities=20% Similarity=0.165 Sum_probs=44.2
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcc--cceEE
Q 026967 116 ASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQK--ISKAI 193 (230)
Q Consensus 116 ~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~vv 193 (230)
+.+...+|.|+.+|=.|-= .--++..+.+.++-+.+.++ .+.+|-.++=|.-|...|..|-+. +.++|
T Consensus 176 ~~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 3444555666666633211 11244556666677777777 788888888888888888766553 66777
Q ss_pred Ee
Q 026967 194 FL 195 (230)
Q Consensus 194 ~i 195 (230)
+-
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 64
No 328
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=30.31 E-value=87 Score=24.10 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=20.5
Q ss_pred HHHhcCCCCcEEEEEEchhHHHHHHHHHhC
Q 026967 156 YLENLLEDEKVILVGHSSGGACVSYALEHF 185 (230)
Q Consensus 156 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 185 (230)
.+++.+.. .-.++|-|.|+..+..++...
T Consensus 21 ~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 21 ALEEEGIE-IDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHCCCC-eeEEEEeCHHHHHHHHHHcCC
Confidence 33444443 558899999999998887654
No 329
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=29.82 E-value=3.8e+02 Score=23.35 Aligned_cols=98 Identities=17% Similarity=0.215 Sum_probs=62.1
Q ss_pred eEEEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCC----------------------CCCCCCHHHHHHHH
Q 026967 97 KFVLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSD----------------------TNSVTTLAEYSKPL 153 (230)
Q Consensus 97 ~vvliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~~~l 153 (230)
..|++-|-+..+ +....+.+.....|..++.+|.--.+.-..+ .+....+..+...+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 346666665554 4566688888889999999996542211100 01112344555556
Q ss_pred HHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccceEEE
Q 026967 154 LDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISKAIF 194 (230)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~vv~ 194 (230)
..++.....-.-++-+|-|.|-.++.-.+...|-.+-+++.
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 66665555434778889999999988888888876666543
No 330
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.67 E-value=87 Score=25.15 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=23.4
Q ss_pred HHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCC
Q 026967 153 LLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (230)
Q Consensus 153 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (230)
+...|++.+.. .-.++|.|.|+..+..++...+
T Consensus 16 vl~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 34444444543 5588999999999988887654
No 331
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=29.17 E-value=1.5e+02 Score=27.46 Aligned_cols=71 Identities=7% Similarity=0.064 Sum_probs=52.0
Q ss_pred CCcceEEEECCCCCCh--hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEE
Q 026967 93 IQYKKFVLIHGEGFGA--WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (230)
.+.++||++-|+..+. .....+...|..+||.|+.+--| . ..+..-.-+-.+..+++....+.|+-
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P------t------~~E~~~~~lwRf~~~lP~~G~i~iFd 363 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP------T------DEEKAQHYLWRFWRHIPRRGRITIFD 363 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc------C------HHHHcCcHHHHHHHhCCCCCeEEEEc
Confidence 5668999999996654 35778889999999999998865 1 12222334667788888766888888
Q ss_pred EchhH
Q 026967 171 HSSGG 175 (230)
Q Consensus 171 hS~Gg 175 (230)
-||=+
T Consensus 364 RSwY~ 368 (493)
T TIGR03708 364 RSWYG 368 (493)
T ss_pred CCccC
Confidence 88743
No 332
>PRK06259 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Provisional
Probab=28.86 E-value=2.4e+02 Score=25.78 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=39.5
Q ss_pred cceEEEECCCCCChh---hHHHHHHHHHHCCCeEEEeC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 026967 95 YKKFVLIHGEGFGAW---CWYKTVASLEEVGLIPTALD-LKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLED 163 (230)
Q Consensus 95 ~~~vvliHG~~~~~~---~~~~~~~~L~~~G~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~ 163 (230)
+..++|++|...+.. .-..++..|.+.|+.|+.++ ..-.|.-.............++...+.++..+.+
T Consensus 260 ~~~v~~f~GC~~~~~~~~~~~a~~~vL~~~G~~~~~~~~~~CCG~p~~~~G~~~~~~~~~~~ni~~~~~~~~~ 332 (486)
T PRK06259 260 KLRVAFFTGCLVDYRLQEVGKDAIRVLNAHGISVIIPKNQVCCGSPLIRTGQTDVAEELKKKNLEIFNKLDVD 332 (486)
T ss_pred CeEEEEECCccccccchHHHHHHHHHHHHCCCeEecCCCCCcccHHHHhcCCHHHHHHHHHHHHHHHHhCCCC
Confidence 346889998754332 23456788999999998774 3334432211122223445555666666665544
No 333
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.72 E-value=91 Score=25.79 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=25.0
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCC
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDL 130 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~ 130 (230)
+.+.+|++-|.....-. +.++..|++.||.|++--.
T Consensus 5 ~~~k~VlItgcs~GGIG-~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIG-YALAKEFARNGYLVYATAR 40 (289)
T ss_pred cCCCeEEEeecCCcchh-HHHHHHHHhCCeEEEEEcc
Confidence 35677888876444333 3578888999999998643
No 334
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=28.66 E-value=91 Score=21.89 Aligned_cols=61 Identities=21% Similarity=0.173 Sum_probs=33.3
Q ss_pred EEEECCCCCChhhHHHHHHHHHHC-CCeEEEeCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHhc
Q 026967 98 FVLIHGEGFGAWCWYKTVASLEEV-GLIPTALDL--KGSGIDLSDTNSVTTLAEYSKPLLDYLENL 160 (230)
Q Consensus 98 vvliHG~~~~~~~~~~~~~~L~~~-G~~vi~~D~--~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l 160 (230)
+|++.|..++.... ++..|++. |+.++..|- .-.+....+.............+.+.++.+
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 64 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWIERDDDEREYIDADIDLLDDILEQL 64 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHCHGCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEeccccccCcchhhHHHHHHHHHHHHHHhh
Confidence 57888886666543 45555554 899998886 433333221111112334445555566555
No 335
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=28.58 E-value=83 Score=25.39 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=22.4
Q ss_pred CCcceEEEECCCCCCh-----hhHHHHHHHHHHCCCeEEEeC
Q 026967 93 IQYKKFVLIHGEGFGA-----WCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~-----~~~~~~~~~L~~~G~~vi~~D 129 (230)
.+++.|++.+|..... +.|..+++.|.+.|+.|+.+-
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 3567888888876633 347788899998887777654
No 336
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=28.56 E-value=1.5e+02 Score=26.17 Aligned_cols=61 Identities=18% Similarity=-0.005 Sum_probs=34.5
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
.++||.+-|+-.++ -.+..|.++||.|+.+-+.-+... ........+...|+..+-+.+++
T Consensus 4 ~kV~v~mSGGVDSS----VaA~lLk~QGyeViGl~m~~~~~~---~~~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 4 KKVLVGMSGGVDSS----VAAYLLKEQGYEVIGLFMKNWDED---GGGGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred cEEEEEccCCHHHH----HHHHHHHHcCCeEEEEEEEeeccC---CCCcCCchhHHHHHHHHHHHhCC
Confidence 45677777764433 345577888999999977655431 12222333444455555555443
No 337
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=27.99 E-value=3.5e+02 Score=23.99 Aligned_cols=67 Identities=22% Similarity=0.238 Sum_probs=42.2
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
.++++|--.-.......+...|...|+.+..+..|.=. ...++ +....+.+.+-..+.+.+-.+++-
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~GE-------~~Ksl-~~~~~i~~~ll~~~~~R~s~iial 101 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPDGE-------EYKSL-ETLEKIYDALLEAGLDRKSTLIAL 101 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCCCc-------ccccH-HHHHHHHHHHHHcCCCCCcEEEEE
Confidence 67777765555555667888999999998777766222 22355 445566666655555445566654
No 338
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=27.73 E-value=3.7e+02 Score=22.59 Aligned_cols=96 Identities=14% Similarity=0.090 Sum_probs=55.8
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEE-EEEc
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL-VGHS 172 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vGhS 172 (230)
.+.+|++=-|...+.+.|...++.+...|-.=+.+=.+|.- . ...|.....-......++.... -+|++ ..||
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~--t---~~~Y~~~~vdl~~i~~lk~~~~-~pV~~D~sHs 206 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGIR--T---FETYTRNTLDLAAVAVIKELSH-LPIIVDPSHA 206 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCC--C---CCCCCHHHHHHHHHHHHHhccC-CCEEEeCCCc
Confidence 35689999999999999999999999888744444445531 1 1112222222233334444332 37777 7999
Q ss_pred hh-----HHHHHHHHHhCCcccceEEEeccc
Q 026967 173 SG-----GACVSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 173 ~G-----g~~a~~~a~~~p~~v~~vv~i~~~ 198 (230)
.| -.++..+... ..+++++-.=+
T Consensus 207 ~G~~~~v~~~~~aAva~---Ga~Gl~iE~H~ 234 (266)
T PRK13398 207 TGRRELVIPMAKAAIAA---GADGLMIEVHP 234 (266)
T ss_pred ccchhhHHHHHHHHHHc---CCCEEEEeccC
Confidence 98 3343333332 25566655433
No 339
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=27.63 E-value=3.1e+02 Score=21.68 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=30.5
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHhcCCC
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLL-DYLENLLED 163 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~-~~l~~l~~~ 163 (230)
...+..|.+.|+.|+-+.. | ....+.++++.++.+. .+++.++.+
T Consensus 132 ~~Nl~~L~~~G~~vi~P~~-g------~~a~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 132 LRNMTKLAEMGAIIMPPVP-A------FYHRPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred HHHHHHHHHCcCEEECCCc-c------cccCCCCHHHHHHHHHHHHHHhcCCC
Confidence 4567778888999888773 2 2234457788877554 677777764
No 340
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=27.58 E-value=3.3e+02 Score=22.02 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=25.7
Q ss_pred eEEEECCC--CCChhhHHHHHHHHHHCCCeEEEeCCCCC
Q 026967 97 KFVLIHGE--GFGAWCWYKTVASLEEVGLIPTALDLKGS 133 (230)
Q Consensus 97 ~vvliHG~--~~~~~~~~~~~~~L~~~G~~vi~~D~~G~ 133 (230)
.+++.+++ ++.......+++.|.+.|+.|..+.....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~ 40 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDE 40 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCC
Confidence 34555654 44455677899999888999888765443
No 341
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=27.46 E-value=1.9e+02 Score=26.06 Aligned_cols=67 Identities=15% Similarity=-0.033 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHH
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYA 181 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~ 181 (230)
..++..|.+.|+.|...-......-........-+.+...++.+.+++.+ .-.++|+|.|..++..+
T Consensus 324 ~~l~~~l~elGm~v~~~~~~~~~~~~~~~~~~~~~~~D~~~l~~~i~~~~---~dliig~s~~k~~A~~l 390 (432)
T TIGR01285 324 AAWATFFTSMGAQIVAAVTTTGSPLLQKLPVETVVIGDLEDLEDLACAAG---ADLLITNSHGRALAQRL 390 (432)
T ss_pred HHHHHHHHHCCCEEEEEEeCCCCHHHHhCCcCcEEeCCHHHHHHHHhhcC---CCEEEECcchHHHHHHc
Confidence 46777788899987665432111000000000111122345666666554 44888999998877664
No 342
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=27.19 E-value=2.7e+02 Score=20.92 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=40.6
Q ss_pred HHHHHHHCCC-eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch-hHHHHHHHHHh
Q 026967 114 TVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS-GGACVSYALEH 184 (230)
Q Consensus 114 ~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~-Gg~~a~~~a~~ 184 (230)
+.+.|...|. +|+.++.+ ....+..+.++..+.+++++.+. +++++|++. |.-++.++|.+
T Consensus 50 l~~~l~~~G~d~v~~~~~~--------~~~~~~~~~~a~~l~~~~~~~~~--~lVl~~~t~~g~~la~~lA~~ 112 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDP--------ALAEYDPEAYADALAELIKEEGP--DLVLFGSTSFGRDLAPRLAAR 112 (164)
T ss_dssp HHHHHHSTTESEEEEEE-G--------GGTTC-HHHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCc--------cccccCHHHHHHHHHHHHHhcCC--CEEEEcCcCCCCcHHHHHHHH
Confidence 4455665786 68888855 22334678889999999998654 588888765 44567777655
No 343
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=26.82 E-value=92 Score=23.85 Aligned_cols=20 Identities=20% Similarity=0.187 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEeCCC
Q 026967 112 YKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~ 131 (230)
..++..|+++|++|+.+|+=
T Consensus 17 ~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 17 ANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp HHHHHHHHHTTS-EEEEEES
T ss_pred HHHHhccccccccccccccC
Confidence 46888999999999999974
No 344
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=26.77 E-value=1.2e+02 Score=23.10 Aligned_cols=30 Identities=23% Similarity=0.119 Sum_probs=20.8
Q ss_pred HHHHHhcCCCCcEEEEEEchhHHHHHHHHHh
Q 026967 154 LDYLENLLEDEKVILVGHSSGGACVSYALEH 184 (230)
Q Consensus 154 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 184 (230)
...|++.+.. .-.++|-|.|+.++..++..
T Consensus 19 l~~L~~~~~~-~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 19 LKALEEAGIP-IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred HHHHHHcCCC-eeEEEEECHHHHHHHHHHcC
Confidence 3344444433 45799999999999888854
No 345
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=26.73 E-value=90 Score=23.33 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=25.0
Q ss_pred eEEEECCCCCChh-h-HHHHHHHHHHCCCeEEEeCCCCCCCCC
Q 026967 97 KFVLIHGEGFGAW-C-WYKTVASLEEVGLIPTALDLKGSGIDL 137 (230)
Q Consensus 97 ~vvliHG~~~~~~-~-~~~~~~~L~~~G~~vi~~D~~G~G~S~ 137 (230)
++|.+-|.-.+.. . -..++..|.++||+|.++=.-++|+..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 3566667644433 3 457889999999999977656666544
No 346
>PRK06490 glutamine amidotransferase; Provisional
Probab=26.30 E-value=3.7e+02 Score=22.07 Aligned_cols=84 Identities=14% Similarity=0.172 Sum_probs=45.2
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCC-CC--C--CCC-------CCCCCCCCHHHHHHHHHHHHHhcCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK-GS--G--IDL-------SDTNSVTTLAEYSKPLLDYLENLLE 162 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~-G~--G--~S~-------~~~~~~~~~~~~~~~l~~~l~~l~~ 162 (230)
.+.+|+.|--......+ .+.|.+.|+.+-.++.. |- . ... ..+...++...|...+.++++..-.
T Consensus 8 ~~vlvi~h~~~~~~g~l---~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~ 84 (239)
T PRK06490 8 RPVLIVLHQERSTPGRV---GQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLK 84 (239)
T ss_pred ceEEEEecCCCCCChHH---HHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHH
Confidence 34667778765555444 44555666655554321 10 0 000 0111222333466666677765443
Q ss_pred CCcEEEEEEchhHHHHHHHH
Q 026967 163 DEKVILVGHSSGGACVSYAL 182 (230)
Q Consensus 163 ~~~v~lvGhS~Gg~~a~~~a 182 (230)
. ++-++|.++|..+...+.
T Consensus 85 ~-~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 85 E-NKPFLGICLGAQMLARHL 103 (239)
T ss_pred C-CCCEEEECHhHHHHHHHc
Confidence 3 567899999999877764
No 347
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=25.66 E-value=1.6e+02 Score=26.50 Aligned_cols=42 Identities=24% Similarity=0.195 Sum_probs=36.8
Q ss_pred CcceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCC
Q 026967 94 QYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGI 135 (230)
Q Consensus 94 ~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~ 135 (230)
..++.|-+-=+|.+.-+-....+.|.+.||.|++|.-.|+|.
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG 224 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGG 224 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCch
Confidence 455788888888888889999999999999999999999984
No 348
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=25.51 E-value=4.2e+02 Score=22.52 Aligned_cols=25 Identities=28% Similarity=0.468 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCCCe--EEEeCCCCCCCC
Q 026967 111 WYKTVASLEEVGLI--PTALDLKGSGID 136 (230)
Q Consensus 111 ~~~~~~~L~~~G~~--vi~~D~~G~G~S 136 (230)
+...++.+.+.|+. =|.+|. |.|..
T Consensus 165 l~~~i~~a~~~GI~~~~IilDP-GiGF~ 191 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLDP-GFGFG 191 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEeC-CCCcC
Confidence 34556667788986 788884 77754
No 349
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=25.36 E-value=1.3e+02 Score=21.84 Aligned_cols=33 Identities=18% Similarity=0.042 Sum_probs=19.2
Q ss_pred CCcceEEEEC-CCCCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 93 IQYKKFVLIH-GEGFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 93 ~~~~~vvliH-G~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
++++.||++. |+..+...| ..|...||.|..+|
T Consensus 85 ~~~~vvvyC~~~G~rs~~a~----~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRSQSLA----WLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccHHHHH----HHHHHcCCceeEeC
Confidence 4567888885 433333222 45566699876555
No 350
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=25.24 E-value=35 Score=26.26 Aligned_cols=49 Identities=24% Similarity=0.217 Sum_probs=24.9
Q ss_pred eCCCCCCCC--CCCCCCCCCHHHHHHHH----HHHHHhcCC---CCcEEEEEEchhHH
Q 026967 128 LDLKGSGID--LSDTNSVTTLAEYSKPL----LDYLENLLE---DEKVILVGHSSGGA 176 (230)
Q Consensus 128 ~D~~G~G~S--~~~~~~~~~~~~~~~~l----~~~l~~l~~---~~~v~lvGhS~Gg~ 176 (230)
+.+-|||.. ....-..++..+.+.-+ ..+.+.... .++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 334455544 11222345666666666 344444322 25999999999877
No 351
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.91 E-value=3.9e+02 Score=22.55 Aligned_cols=58 Identities=22% Similarity=0.149 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHCCC-eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHH
Q 026967 109 WCWYKTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYAL 182 (230)
Q Consensus 109 ~~~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a 182 (230)
.....+++.+.+.|. -++.+|+| .+..+++....++.+.+ .|.++.-+..---.-..+
T Consensus 109 ~Gie~F~~~~~~~GvdGlivpDLP---------------~ee~~~~~~~~~~~gi~-~I~lvaPtt~~~rl~~i~ 167 (265)
T COG0159 109 YGIEKFLRRAKEAGVDGLLVPDLP---------------PEESDELLKAAEKHGID-PIFLVAPTTPDERLKKIA 167 (265)
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCC---------------hHHHHHHHHHHHHcCCc-EEEEeCCCCCHHHHHHHH
Confidence 344567888888886 58889988 23344555566666666 777776555443333333
No 352
>PRK02399 hypothetical protein; Provisional
Probab=24.76 E-value=1.8e+02 Score=26.13 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=35.7
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVGLIPTALDLKGSGID 136 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S 136 (230)
.+++|-+-=+|.+.-+-....+.|.+.||.|++|.-.|.|.-
T Consensus 185 ~kp~Ig~TmfGvTtp~v~~~~~~Le~~GyEvlVFHATG~GGr 226 (406)
T PRK02399 185 DKPLIGLTMFGVTTPCVQAAREELEARGYEVLVFHATGTGGR 226 (406)
T ss_pred CCceEEEecCCCcHHHHHHHHHHHHhCCCeEEEEcCCCCchH
Confidence 456777777788888888999999999999999999999853
No 353
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=24.43 E-value=3.9e+02 Score=23.49 Aligned_cols=64 Identities=17% Similarity=0.123 Sum_probs=38.2
Q ss_pred ceEEEECCCCC--ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEE
Q 026967 96 KKFVLIHGEGF--GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG 170 (230)
Q Consensus 96 ~~vvliHG~~~--~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 170 (230)
..+++++|-.. ....+..+.+.|.+.|..+..+|-- . + ..+ .+.+..+.+.++..+.+ -|+-+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v--~-----~--~p~-~~~v~~~~~~~~~~~~D-~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV--E-----P--NPT-TTTVMEGAALAREEGCD-FVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc--c-----C--CCC-HHHHHHHHHHHHHcCCC-EEEEeC
Confidence 45677776543 3456778889999989988877611 0 1 112 33355566666666666 444343
No 354
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.36 E-value=1.5e+02 Score=25.47 Aligned_cols=36 Identities=11% Similarity=-0.092 Sum_probs=27.0
Q ss_pred cceEEEECC-CCC-----ChhhHHHHHHHHHHCCCeEEEeCC
Q 026967 95 YKKFVLIHG-EGF-----GAWCWYKTVASLEEVGLIPTALDL 130 (230)
Q Consensus 95 ~~~vvliHG-~~~-----~~~~~~~~~~~L~~~G~~vi~~D~ 130 (230)
++.|++.|| ..+ ..+.|..+++.|.++|+.|+.+-.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~ 216 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGG 216 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecC
Confidence 578888898 332 234688999999999988887653
No 355
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=24.35 E-value=5e+02 Score=23.53 Aligned_cols=37 Identities=14% Similarity=-0.038 Sum_probs=25.2
Q ss_pred eEEEECCCCCChh---hH-HHHHHHHHHCCCeEEEeCCCCC
Q 026967 97 KFVLIHGEGFGAW---CW-YKTVASLEEVGLIPTALDLKGS 133 (230)
Q Consensus 97 ~vvliHG~~~~~~---~~-~~~~~~L~~~G~~vi~~D~~G~ 133 (230)
.||+-.|+..... .. ..+.+...+.|.+++.|+..|.
T Consensus 92 ~vi~s~gf~e~g~~g~~~~~~l~~~a~~~girvlGPnc~G~ 132 (447)
T TIGR02717 92 AVVITAGFKEVGEEGAELEQELVEIARKYGMRLLGPNCLGI 132 (447)
T ss_pred EEEECCCccccCcchHHHHHHHHHHHHHcCCEEEecCeeeE
Confidence 4555567654321 23 4677777788999999998874
No 356
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=24.19 E-value=4.4e+02 Score=22.25 Aligned_cols=89 Identities=11% Similarity=0.006 Sum_probs=52.1
Q ss_pred ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCC
Q 026967 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (230)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (230)
+.+.+..+++++.+.|.+-+.+--- .| .....+.++..+-+..+++..... -.+++|-+..-.-+..++...-
T Consensus 24 D~~~l~~li~~l~~~Gv~gi~v~Gs-tG-----E~~~Lt~eEr~~v~~~~~~~~~g~-~pvi~gv~~~t~~ai~~a~~a~ 96 (296)
T TIGR03249 24 DEAAYRENIEWLLGYGLEALFAAGG-TG-----EFFSLTPAEYEQVVEIAVSTAKGK-VPVYTGVGGNTSDAIEIARLAE 96 (296)
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCC-Cc-----CcccCCHHHHHHHHHHHHHHhCCC-CcEEEecCccHHHHHHHHHHHH
Confidence 4456888999999999888776522 12 233346677766666777776543 3344554422223444443321
Q ss_pred -cccceEEEeccccCCC
Q 026967 187 -QKISKAIFLCATMVSD 202 (230)
Q Consensus 187 -~~v~~vv~i~~~~~~~ 202 (230)
..+++++++.|+....
T Consensus 97 ~~Gadav~~~pP~y~~~ 113 (296)
T TIGR03249 97 KAGADGYLLLPPYLING 113 (296)
T ss_pred HhCCCEEEECCCCCCCC
Confidence 2478888777765443
No 357
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=24.13 E-value=1.2e+02 Score=22.80 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHH
Q 026967 146 LAEYSKPLLDYLENLLEDEKVILVGHSSGGACV 178 (230)
Q Consensus 146 ~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (230)
.......+...+..++.. .|+|+||+-=|.+.
T Consensus 38 ~~~~~~sle~av~~l~v~-~IiV~gHt~CGa~~ 69 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVK-EIIVCGHTDCGAIK 69 (153)
T ss_dssp -HHHHHHHHHHHHTST-S-EEEEEEETT-HHHH
T ss_pred ccchhhheeeeeecCCCC-EEEEEcCCCchHHH
Confidence 355567777888888887 99999999766655
No 358
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=24.03 E-value=2e+02 Score=22.66 Aligned_cols=62 Identities=15% Similarity=0.056 Sum_probs=30.8
Q ss_pred CCCCChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEE
Q 026967 103 GEGFGAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGH 171 (230)
Q Consensus 103 G~~~~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 171 (230)
|++++...=..+++.+++..-.++.+|+--. .....+...+......+..-.++.+|+++-+
T Consensus 40 GfsG~~~le~~~a~~ia~~~a~~~~ld~~~N-------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 40 GFSGNGKLEPEVADLIAEIDADLIVLDCGPN-------MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp E-TCCCS--HHHHHHHHHS--SEEEEEESHH-------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred eecCccccCHHHHHHHhcCCCCEEEEEeecC-------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 3444333333455556555556666664322 2334666666666666666666668888864
No 359
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=23.93 E-value=1.4e+02 Score=20.25 Aligned_cols=30 Identities=20% Similarity=0.039 Sum_probs=18.3
Q ss_pred CCcceEEEECCCCCChhhHHHHHHHHHHCCCeEE
Q 026967 93 IQYKKFVLIHGEGFGAWCWYKTVASLEEVGLIPT 126 (230)
Q Consensus 93 ~~~~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi 126 (230)
+.++.||+++++..+ ...+..|.+.||.+.
T Consensus 60 ~~~~ivv~C~~G~rs----~~aa~~L~~~G~~~~ 89 (100)
T cd01523 60 DDQEVTVICAKEGSS----QFVAELLAERGYDVD 89 (100)
T ss_pred CCCeEEEEcCCCCcH----HHHHHHHHHcCceeE
Confidence 345666666643322 346677888899843
No 360
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=23.60 E-value=2e+02 Score=24.17 Aligned_cols=38 Identities=16% Similarity=0.096 Sum_probs=22.9
Q ss_pred eEEEECCCCCChhh--HHHHHHHHHHCCCeEEEeCCCCCC
Q 026967 97 KFVLIHGEGFGAWC--WYKTVASLEEVGLIPTALDLKGSG 134 (230)
Q Consensus 97 ~vvliHG~~~~~~~--~~~~~~~L~~~G~~vi~~D~~G~G 134 (230)
++|++-|++++... ...+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 57888899776653 346778888889999988844333
No 361
>CHL00194 ycf39 Ycf39; Provisional
Probab=23.41 E-value=2.3e+02 Score=23.87 Aligned_cols=31 Identities=16% Similarity=0.025 Sum_probs=19.8
Q ss_pred EEECCCCCChhhHHHHHHHHHHCCCeEEEeCCC
Q 026967 99 VLIHGEGFGAWCWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 99 vliHG~~~~~~~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
|++-|..+.-.. .+++.|.++|+.|.+++..
T Consensus 3 IlVtGatG~iG~--~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 3 LLVIGATGTLGR--QIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred EEEECCCcHHHH--HHHHHHHHCCCeEEEEEcC
Confidence 445454332222 3777888889999998754
No 362
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=23.26 E-value=1.7e+02 Score=25.26 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=27.6
Q ss_pred CcEEEEEEchhHHHHHHHHHhCC----------------cccceEEEeccccC
Q 026967 164 EKVILVGHSSGGACVSYALEHFP----------------QKISKAIFLCATMV 200 (230)
Q Consensus 164 ~~v~lvGhS~Gg~~a~~~a~~~p----------------~~v~~vv~i~~~~~ 200 (230)
.+++|+|+|-|+.+.-++..... ..|+.+-.+++...
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 58999999999998766654322 25788888888764
No 363
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=23.15 E-value=1.7e+02 Score=24.78 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=24.5
Q ss_pred CcceEEEECCCCCC-----hhhHHHHHHHHHHCCCeEEEe
Q 026967 94 QYKKFVLIHGEGFG-----AWCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 94 ~~~~vvliHG~~~~-----~~~~~~~~~~L~~~G~~vi~~ 128 (230)
.++.|+++||.... .+.|..+++.|.+.|+.|+..
T Consensus 177 ~~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~ 216 (322)
T PRK10964 177 AGPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLP 216 (322)
T ss_pred CCCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 34567778887432 235778888998889987753
No 364
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=23.12 E-value=2.7e+02 Score=27.25 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=22.0
Q ss_pred HHHHHHHHHHH---hcCCCCcEEEEEEchhHHHHHHHHH
Q 026967 148 EYSKPLLDYLE---NLLEDEKVILVGHSSGGACVSYALE 183 (230)
Q Consensus 148 ~~~~~l~~~l~---~l~~~~~v~lvGhS~Gg~~a~~~a~ 183 (230)
....++.+.+. ..... --+|.|.|+||..+..+|.
T Consensus 48 ~~Y~~l~~~l~~~~~~~~~-~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 48 AVYGALLELLGAHLRLRVR-VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred hHHHHHHHHhhhhhccCCC-CceEEeeCHHHHHHHHHHc
Confidence 33344555554 22222 3478999999998877775
No 365
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=23.04 E-value=1.1e+02 Score=29.58 Aligned_cols=78 Identities=10% Similarity=0.039 Sum_probs=48.1
Q ss_pred CcceEEEECCCCC----------ChhhHHHHHHHHHHCCCeEEEeCC-----CCCCCCCCCC---CCCCCHHHHHHHHHH
Q 026967 94 QYKKFVLIHGEGF----------GAWCWYKTVASLEEVGLIPTALDL-----KGSGIDLSDT---NSVTTLAEYSKPLLD 155 (230)
Q Consensus 94 ~~~~vvliHG~~~----------~~~~~~~~~~~L~~~G~~vi~~D~-----~G~G~S~~~~---~~~~~~~~~~~~l~~ 155 (230)
++-+|++.|.... +.+.|...+++|.++||.++.+|- .|-+.-.... ...+...+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 3456777787643 234688999999999999999862 2211111000 011223345567788
Q ss_pred HHHhcCCCCcEEEEEE
Q 026967 156 YLENLLEDEKVILVGH 171 (230)
Q Consensus 156 ~l~~l~~~~~v~lvGh 171 (230)
+|++.+...-++++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 8888887656667764
No 366
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=22.87 E-value=1.3e+02 Score=26.12 Aligned_cols=33 Identities=18% Similarity=0.049 Sum_probs=23.0
Q ss_pred cCCCcceEEEECCCCCChhhHH--HHHHHHHHCCC
Q 026967 91 ENIQYKKFVLIHGEGFGAWCWY--KTVASLEEVGL 123 (230)
Q Consensus 91 ~~~~~~~vvliHG~~~~~~~~~--~~~~~L~~~G~ 123 (230)
+.+.+|.++=+|||.++...|- -+++.+-..|.
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 4567888999999988877763 35555555443
No 367
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=22.79 E-value=2.6e+02 Score=24.34 Aligned_cols=20 Identities=25% Similarity=0.165 Sum_probs=16.2
Q ss_pred HHHHHHHHCCCeEEEeCCCC
Q 026967 113 KTVASLEEVGLIPTALDLKG 132 (230)
Q Consensus 113 ~~~~~L~~~G~~vi~~D~~G 132 (230)
.++..|.++|+.|+++|...
T Consensus 36 ~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 36 HIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred HHHHHHHhCCCEEEEEEecc
Confidence 37788888899999998653
No 368
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=22.37 E-value=5e+02 Score=23.44 Aligned_cols=67 Identities=16% Similarity=0.123 Sum_probs=46.7
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccce
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (230)
...+..|.+.|..|++.-- .+.+++...+...++..... +-+++ .-||.++..+...+|+....
T Consensus 75 d~vaa~l~~~gi~v~a~~~-------------~~~~~y~~~~~~~l~~~~~~-p~~i~--DdGg~~~~~~~~~~~~~~~~ 138 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWKG-------------ETLEEYWWCIEQALKFPDGE-PNMIL--DDGGDLTLLIHKKHPELLPG 138 (413)
T ss_pred HHHHHHHHhcCceEEEEcC-------------CCHHHHHHHHHHHHhccCCC-CcEEE--ecchHHHHHHHhhhhhhhhc
Confidence 4578888888999988751 24467766777777764433 55555 88999988887777765555
Q ss_pred EEE
Q 026967 192 AIF 194 (230)
Q Consensus 192 vv~ 194 (230)
++-
T Consensus 139 ~~G 141 (413)
T cd00401 139 IRG 141 (413)
T ss_pred cEE
Confidence 443
No 369
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=22.30 E-value=1.4e+02 Score=27.72 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=52.2
Q ss_pred cceEEEECCCCCChh-----hHHHHHHHHHHC-CCeEEEeCCCC--CCCC----CCCCCCCCCHHHHH---HHHHHHHHh
Q 026967 95 YKKFVLIHGEGFGAW-----CWYKTVASLEEV-GLIPTALDLKG--SGID----LSDTNSVTTLAEYS---KPLLDYLEN 159 (230)
Q Consensus 95 ~~~vvliHG~~~~~~-----~~~~~~~~L~~~-G~~vi~~D~~G--~G~S----~~~~~~~~~~~~~~---~~l~~~l~~ 159 (230)
..++|.|-|+|+... .|.. ..|+.. ..-|+.+++|= +|.- ..+.+.-..+.|.. ..+.+-+..
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~a 212 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAA 212 (601)
T ss_pred ceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHH
Confidence 346788887765433 2332 223332 24555566651 1111 01122223344433 344555555
Q ss_pred cCCC-CcEEEEEEchhHHH-HHHHHH-hCCcccceEEEecccc
Q 026967 160 LLED-EKVILVGHSSGGAC-VSYALE-HFPQKISKAIFLCATM 199 (230)
Q Consensus 160 l~~~-~~v~lvGhS~Gg~~-a~~~a~-~~p~~v~~vv~i~~~~ 199 (230)
++.+ ++|.|+|-|.|+.- .+.+.. .-...++..|+-++.+
T Consensus 213 FGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 213 FGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred hCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 6543 69999999999874 333332 1112477777766654
No 370
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=22.24 E-value=3.6e+02 Score=20.56 Aligned_cols=75 Identities=23% Similarity=0.285 Sum_probs=42.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccce
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (230)
..+.++|.+.||.|+ |+ |... .....++.+++..+...+..-..+.-|.+.|--.|- ..+|.++| .|++
T Consensus 16 ~~l~~~L~~~g~eV~--D~---G~~~--~~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~---siaANK~~-GIRA 84 (148)
T PRK05571 16 EEIIEHLEELGHEVI--DL---GPDS--YDASVDYPDYAKKVAEAVVAGEADRGILICGTGIGM---SIAANKVK-GIRA 84 (148)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCC--CCCCCCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHH---HHHHhcCC-CeEE
Confidence 358889999999885 42 2111 111357788888888877665444234444444443 23444554 3555
Q ss_pred EEEecc
Q 026967 192 AIFLCA 197 (230)
Q Consensus 192 vv~i~~ 197 (230)
.+..++
T Consensus 85 A~~~d~ 90 (148)
T PRK05571 85 ALCHDT 90 (148)
T ss_pred EEECCH
Confidence 555543
No 371
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=22.23 E-value=3.6e+02 Score=20.48 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCCcccce
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFPQKISK 191 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 191 (230)
..+.++|.+.||.|+ |+ |... ....++.+++..+...+..-..+.-|.+.|--.|-. .+|.++|. |.+
T Consensus 14 ~~l~~~L~~~g~eV~--D~---G~~~---~~~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~s---iaANK~~G-Ira 81 (144)
T TIGR00689 14 SEIIEHLKQKGHEVI--DC---GTLY---DERVDYPDYAKLVADKVVAGEVSLGILICGTGIGMS---IAANKFKG-IRA 81 (144)
T ss_pred HHHHHHHHHCCCEEE--Ec---CCCC---CCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHH---HHHhcCCC-eEE
Confidence 358889999999885 43 2111 122467888888888876544442333333333322 33444442 444
Q ss_pred EEEec
Q 026967 192 AIFLC 196 (230)
Q Consensus 192 vv~i~ 196 (230)
.+..+
T Consensus 82 a~~~d 86 (144)
T TIGR00689 82 ALCVD 86 (144)
T ss_pred EEECC
Confidence 44444
No 372
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=22.15 E-value=5.1e+02 Score=22.26 Aligned_cols=88 Identities=8% Similarity=-0.042 Sum_probs=48.9
Q ss_pred eEEEECCCCCChhhHHHHHHH-HHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhH
Q 026967 97 KFVLIHGEGFGAWCWYKTVAS-LEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGG 175 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~-L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 175 (230)
.||+--|+.... ....... ..+.|.+++.|+..|.=........ ++.. .+ ... .+|.++.+|-+-
T Consensus 97 ~vIisaGf~e~g--~~~~~~~~ar~~girviGPNc~Gii~~~~~~~~--~~~~-------~~--~~~-G~ValiSQSG~l 162 (300)
T PLN00125 97 VVCITEGIPQHD--MVRVKAALNRQSKTRLIGPNCPGIIKPGECKIG--IMPG-------YI--HKP-GRIGIVSRSGTL 162 (300)
T ss_pred EEEECCCCCccc--HHHHHHHHHhhcCCEEECCCCceeeccccccee--ecCC-------CC--CCC-CcEEEEeCCccH
Confidence 566667775443 3333333 4557899999999886432210000 0000 01 123 379999888764
Q ss_pred HH-HHHHHHhCCcccceEEEeccc
Q 026967 176 AC-VSYALEHFPQKISKAIFLCAT 198 (230)
Q Consensus 176 ~~-a~~~a~~~p~~v~~vv~i~~~ 198 (230)
.. .+.++....-.++.+|.++.-
T Consensus 163 ~~~l~~~~~~~giG~S~~VS~Gn~ 186 (300)
T PLN00125 163 TYEAVFQTTAVGLGQSTCVGIGGD 186 (300)
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCC
Confidence 43 334454445568888877665
No 373
>PF13728 TraF: F plasmid transfer operon protein
Probab=21.98 E-value=2.9e+02 Score=22.36 Aligned_cols=42 Identities=12% Similarity=0.092 Sum_probs=33.6
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHH-CCCeEEEeCCCCCCCCC
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEE-VGLIPTALDLKGSGIDL 137 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~ 137 (230)
-.++|+-|-+.....+.+++..|++ .|+.|+.++.-|.+...
T Consensus 123 gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 123 GLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred EEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 3677777877777788888888876 59999999998888654
No 374
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=21.86 E-value=1.2e+02 Score=26.48 Aligned_cols=31 Identities=23% Similarity=0.136 Sum_probs=26.0
Q ss_pred ceEEEECCCCCChhhHHHHHHHHHHCCCeEEEe
Q 026967 96 KKFVLIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 96 ~~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (230)
...||+-|..+.-..| ++..|-.+||.|.+-
T Consensus 6 ~~~VcVTGAsGfIgsw--ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSW--IVKLLLSRGYTVRGT 36 (327)
T ss_pred CcEEEEeCCchHHHHH--HHHHHHhCCCEEEEE
Confidence 4678999988888788 888888999998874
No 375
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=21.84 E-value=2.3e+02 Score=19.70 Aligned_cols=42 Identities=12% Similarity=0.028 Sum_probs=26.6
Q ss_pred cceEEEECCCCCChhhHHHHHHHHHHCC-CeEEEeCCCCCCCC
Q 026967 95 YKKFVLIHGEGFGAWCWYKTVASLEEVG-LIPTALDLKGSGID 136 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~~~~~~~~L~~~G-~~vi~~D~~G~G~S 136 (230)
.++||++.+-.....-+..-.......+ -+++..+-.|||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCccee
Confidence 4789999987665555533322222222 57888888899854
No 376
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=21.70 E-value=3.4e+02 Score=21.14 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=32.0
Q ss_pred HHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchh
Q 026967 117 SLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSG 174 (230)
Q Consensus 117 ~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 174 (230)
.|.+.|++.+.+|.=.+=.. +....-..++.+.+.++.+....+ +|.|+.-|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~---~~~~~i~~~~~~~~~~l~~~~~~~-~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP---PYEDEIPPEYAEWLNELKKQFGKD-RVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC---CCcCcCCHHHHHHHHHHHHHCCCC-eEEEEECCCC
Confidence 48888999999996644221 111122234444444444454444 7999999886
No 377
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=21.52 E-value=1.7e+02 Score=20.77 Aligned_cols=29 Identities=21% Similarity=0.115 Sum_probs=21.3
Q ss_pred EECCCCCChhhHHHHHHHHHHCCCeEEEe
Q 026967 100 LIHGEGFGAWCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 100 liHG~~~~~~~~~~~~~~L~~~G~~vi~~ 128 (230)
|+.........+..++..|.+.||.+++-
T Consensus 4 lisv~~~dk~~~~~~a~~l~~~G~~i~aT 32 (116)
T cd01423 4 LISIGSYSKPELLPTAQKLSKLGYKLYAT 32 (116)
T ss_pred EEecCcccchhHHHHHHHHHHCCCEEEEc
Confidence 34333345667888999999999999874
No 378
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=21.43 E-value=6.3e+02 Score=23.04 Aligned_cols=77 Identities=13% Similarity=0.171 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHH-CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEE-EEchhHHHHHHHHHhCC
Q 026967 109 WCWYKTVASLEE-VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV-GHSSGGACVSYALEHFP 186 (230)
Q Consensus 109 ~~~~~~~~~L~~-~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv-GhS~Gg~~a~~~a~~~p 186 (230)
..+...+..+.. .++.++.+|-+|.-.. -......+..+++..... .++|+ .-+.++.-+...+..|.
T Consensus 306 ~~L~~aL~~lk~~~~~DvVLIDTaGRs~k---------d~~lm~EL~~~lk~~~Pd-evlLVLsATtk~~d~~~i~~~F~ 375 (436)
T PRK11889 306 AAMTRALTYFKEEARVDYILIDTAGKNYR---------ASETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFK 375 (436)
T ss_pred HHHHHHHHHHHhccCCCEEEEeCccccCc---------CHHHHHHHHHHHhhcCCC-eEEEEECCccChHHHHHHHHHhc
Confidence 334444455553 3799999998876431 133455566666655554 45544 33456666566665543
Q ss_pred -cccceEEEe
Q 026967 187 -QKISKAIFL 195 (230)
Q Consensus 187 -~~v~~vv~i 195 (230)
-.++++|+-
T Consensus 376 ~~~idglI~T 385 (436)
T PRK11889 376 DIHIDGIVFT 385 (436)
T ss_pred CCCCCEEEEE
Confidence 357788774
No 379
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.40 E-value=70 Score=27.73 Aligned_cols=18 Identities=17% Similarity=-0.010 Sum_probs=14.4
Q ss_pred EEEEEEchhHHHHHHHHH
Q 026967 166 VILVGHSSGGACVSYALE 183 (230)
Q Consensus 166 v~lvGhS~Gg~~a~~~a~ 183 (230)
-.++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 368999999988777664
No 380
>COG1485 Predicted ATPase [General function prediction only]
Probab=21.39 E-value=2e+02 Score=25.47 Aligned_cols=47 Identities=28% Similarity=0.273 Sum_probs=32.7
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEch
Q 026967 114 TVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSS 173 (230)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 173 (230)
++..+.++ ++|+|+| .....++.| +.-+..++++|-.. .|+||.-|=
T Consensus 123 iA~~~~~~-~~vLCfD----------EF~VtDI~D-AMiL~rL~~~Lf~~-GV~lvaTSN 169 (367)
T COG1485 123 IADELAAE-TRVLCFD----------EFEVTDIAD-AMILGRLLEALFAR-GVVLVATSN 169 (367)
T ss_pred HHHHHHhc-CCEEEee----------eeeecChHH-HHHHHHHHHHHHHC-CcEEEEeCC
Confidence 45556665 8888888 344444544 56777888888776 889998884
No 381
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=21.36 E-value=96 Score=18.23 Aligned_cols=32 Identities=28% Similarity=0.179 Sum_probs=22.0
Q ss_pred CCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 026967 121 VGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLE 158 (230)
Q Consensus 121 ~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 158 (230)
.||.+.+||+||.-. ...++++....+.+++.
T Consensus 12 ~~y~~~~pdlpg~~t------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSEEEEETTCCTCEE------EESSHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh------cCCCHHHHHHHHHHHHH
Confidence 478999999997641 22466777777666664
No 382
>PRK13753 dihydropteroate synthase; Provisional
Probab=21.12 E-value=3.9e+02 Score=22.74 Aligned_cols=59 Identities=25% Similarity=0.160 Sum_probs=31.5
Q ss_pred HHHHHHHCCC--eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHH
Q 026967 114 TVASLEEVGL--IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACV 178 (230)
Q Consensus 114 ~~~~L~~~G~--~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 178 (230)
-++.+.+.|. .=|.+| ||.|..... .. ..-......+..+...++.. +++|+|==.++.
T Consensus 156 ~i~~~~~~Gi~~~~IilD-PGiGF~k~k-~~-~~n~~ll~~l~~l~~~~g~P---vLvg~SRKsfig 216 (279)
T PRK13753 156 RVSALRRSGVAADRLILD-PGMGFFLSP-AP-ETSLHVLSNLQKLKSALGLP---LLVSVSRKSFLG 216 (279)
T ss_pred HHHHHHHcCCChhhEEEe-CCCCCCCCC-Ch-HHHHHHHHhHHHHHHhCCCc---eEEEccHhHHHH
Confidence 4445666787 357778 688863111 11 11122334444443334433 789998776664
No 383
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=20.84 E-value=3.7e+02 Score=20.20 Aligned_cols=73 Identities=19% Similarity=0.218 Sum_probs=39.2
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEE-EEchhHHHHHHHHHhCCcccc
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV-GHSSGGACVSYALEHFPQKIS 190 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv-GhS~Gg~~a~~~a~~~p~~v~ 190 (230)
..+.++|.+.||.|+=+-.- .....++.+++..+...+..-..+ .-+++ |.-.|- ..+|.++|. |.
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~--------~~~~~dy~~~a~~va~~V~~~~~d-~GIliCgtGiG~---~iaANK~~G-Ir 81 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTY--------SEDSVDYPDFAEKVAEAVASGEAD-RGILICGTGIGM---SIAANKVPG-IR 81 (140)
T ss_dssp HHHHHHHHHTTEEEEEESES--------STST--HHHHHHHHHHHHHTTSSS-EEEEEESSSHHH---HHHHHTSTT---
T ss_pred HHHHHHHHHCCCEEEEeCCC--------CCCCCCHHHHHHHHHHHHHcccCC-eEEEEcCCChhh---hhHhhcCCC-EE
Confidence 45888999999988765422 112557888888888887765544 43333 333332 233444543 54
Q ss_pred eEEEecc
Q 026967 191 KAIFLCA 197 (230)
Q Consensus 191 ~vv~i~~ 197 (230)
+.+..++
T Consensus 82 Aa~~~d~ 88 (140)
T PF02502_consen 82 AALCSDP 88 (140)
T ss_dssp EEE-SSH
T ss_pred EEeeCCH
Confidence 4444433
No 384
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.72 E-value=1.1e+02 Score=22.53 Aligned_cols=22 Identities=23% Similarity=0.297 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHCCCeEEEeCCC
Q 026967 110 CWYKTVASLEEVGLIPTALDLK 131 (230)
Q Consensus 110 ~~~~~~~~L~~~G~~vi~~D~~ 131 (230)
.|...++.|+++||.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4667899999999999999853
No 385
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.62 E-value=1.7e+02 Score=25.17 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCC---CCcEEEEEEc--hhHHHHHHHHHh
Q 026967 150 SKPLLDYLENLLE---DEKVILVGHS--SGGACVSYALEH 184 (230)
Q Consensus 150 ~~~l~~~l~~l~~---~~~v~lvGhS--~Gg~~a~~~a~~ 184 (230)
+..+.++|++.+. ++++.++|.| +|--++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5667778877654 3799999997 898898888764
No 386
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=20.59 E-value=1.4e+02 Score=31.27 Aligned_cols=28 Identities=32% Similarity=0.235 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEEchhHH
Q 026967 148 EYSKPLLDYLENLLEDEKVILVGHSSGGA 176 (230)
Q Consensus 148 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 176 (230)
..--.+.++|..+++. +-.+||||.|-.
T Consensus 567 AiQiaLtDlLs~lgi~-PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 567 AIQIALTDLLSCLGIR-PDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHHHHHhcCCC-CCcccccccchh
Confidence 3334566777788877 789999999854
No 387
>PF10813 DUF2733: Protein of unknown function (DUF2733); InterPro: IPR024360 The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment []. UL11 is acylated, which is crucial for lipid raft association [].
Probab=20.52 E-value=49 Score=18.29 Aligned_cols=12 Identities=17% Similarity=0.406 Sum_probs=8.2
Q ss_pred CCCceeeecccc
Q 026967 1 MGNRFICMNKKE 12 (230)
Q Consensus 1 ~~~~~~~~~~~~ 12 (230)
||++++|-.+..
T Consensus 1 MG~~~s~Ckrr~ 12 (32)
T PF10813_consen 1 MGSLLSMCKRRH 12 (32)
T ss_pred CcceeeeeeccC
Confidence 888888765443
No 388
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.51 E-value=2.2e+02 Score=24.04 Aligned_cols=35 Identities=20% Similarity=0.109 Sum_probs=25.2
Q ss_pred CcceEEEECCCCCCh-----hhHHHHHHHHHHCCCeEEEe
Q 026967 94 QYKKFVLIHGEGFGA-----WCWYKTVASLEEVGLIPTAL 128 (230)
Q Consensus 94 ~~~~vvliHG~~~~~-----~~~~~~~~~L~~~G~~vi~~ 128 (230)
+++.|++.||..... +.|..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 456788888875433 35777888888778887755
No 389
>PRK07933 thymidylate kinase; Validated
Probab=20.34 E-value=2.5e+02 Score=22.46 Aligned_cols=39 Identities=21% Similarity=0.105 Sum_probs=28.8
Q ss_pred EEEECCCCCChh--hHHHHHHHHHHCCCeEEEeCCCCCCCC
Q 026967 98 FVLIHGEGFGAW--CWYKTVASLEEVGLIPTALDLKGSGID 136 (230)
Q Consensus 98 vvliHG~~~~~~--~~~~~~~~L~~~G~~vi~~D~~G~G~S 136 (230)
+|.+=|..++.. .-..+.++|...|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 455667755443 356788999999999999999966543
No 390
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.30 E-value=1.1e+02 Score=27.65 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=17.7
Q ss_pred EEEEEchhHHHHHHHHHhCCcc
Q 026967 167 ILVGHSSGGACVSYALEHFPQK 188 (230)
Q Consensus 167 ~lvGhS~Gg~~a~~~a~~~p~~ 188 (230)
++.|-|.|+.++..++...++.
T Consensus 104 vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 104 IISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred EEEEECHHHHHHHHHHcCCHHH
Confidence 7899999999998888754443
No 391
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=20.29 E-value=5.2e+02 Score=21.72 Aligned_cols=57 Identities=14% Similarity=-0.001 Sum_probs=36.0
Q ss_pred EEECCCCCCh-hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 026967 99 VLIHGEGFGA-WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLEN 159 (230)
Q Consensus 99 vliHG~~~~~-~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 159 (230)
|+.+..+... ..+....+.|.+.||.|+..+.-..... ....+-++.++++.+++..
T Consensus 3 iiapSs~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~----~~a~s~~~Ra~dL~~a~~d 60 (282)
T cd07025 3 IVAPSSPIDEEERLERAIARLESLGLEVVVGPHVLARDG----YLAGTDEERAADLNAAFAD 60 (282)
T ss_pred EEeCCCCCCcHHHHHHHHHHHHhCCCEEEeccchhhhcC----ccCCCHHHHHHHHHHHhhC
Confidence 3444444444 6777888899999999998876543221 1223556667777766644
No 392
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=20.28 E-value=4.3e+02 Score=20.72 Aligned_cols=72 Identities=15% Similarity=0.056 Sum_probs=39.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEE-EchhHHHHHHHHHhCCcccc
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVG-HSSGGACVSYALEHFPQKIS 190 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG-hS~Gg~~a~~~a~~~p~~v~ 190 (230)
..+.++|.+.||.|+=+- ... ....++.+++..+...+..-..+ .-+++. --.|- ..+|.++| .|.
T Consensus 16 ~~l~~~L~~~G~eV~D~G-----~~~---~e~~dYpd~a~~va~~V~~g~~d-~GIliCGTGiG~---siaANKv~-GIR 82 (171)
T PRK08622 16 MAVSDYLKSKGHEVIDVG-----TYD---FTRTHYPIFGKKVGEAVASGEAD-LGVCICGTGVGI---SNAVNKVP-GIR 82 (171)
T ss_pred HHHHHHHHHCCCEEEEcC-----CCC---CCCCChHHHHHHHHHHHHcCCCc-EEEEEcCCcHHH---HHHHhcCC-CeE
Confidence 468899999999885332 111 11245788888887777654444 444443 33332 23344444 255
Q ss_pred eEEEec
Q 026967 191 KAIFLC 196 (230)
Q Consensus 191 ~vv~i~ 196 (230)
+.+..+
T Consensus 83 AA~~~d 88 (171)
T PRK08622 83 SALVRD 88 (171)
T ss_pred EEEeCC
Confidence 444444
No 393
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=20.27 E-value=3.1e+02 Score=23.15 Aligned_cols=70 Identities=11% Similarity=0.120 Sum_probs=47.9
Q ss_pred CCCcceEEEECCCCCCh--hhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEE
Q 026967 92 NIQYKKFVLIHGEGFGA--WCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILV 169 (230)
Q Consensus 92 ~~~~~~vvliHG~~~~~--~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 169 (230)
..+.++||++-|..... .....+.++|..+|++|+++--| + .-+.--.-+-.++.+++....|+++
T Consensus 70 ~~~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~aP------t------~~E~~qwY~qRy~~~lPa~GeiviF 137 (270)
T COG2326 70 ETGQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPAP------T------DRERGQWYFQRYVAHLPAAGEIVIF 137 (270)
T ss_pred hcCCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCCC------C------hHhhccHHHHHHHHhCCCCCeEEEe
Confidence 34567888999985433 35778999999999999998766 1 1111122445677888775577777
Q ss_pred EEch
Q 026967 170 GHSS 173 (230)
Q Consensus 170 GhS~ 173 (230)
--||
T Consensus 138 dRSw 141 (270)
T COG2326 138 DRSW 141 (270)
T ss_pred chhh
Confidence 7776
No 394
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=20.17 E-value=5.4e+02 Score=21.81 Aligned_cols=87 Identities=14% Similarity=0.068 Sum_probs=51.2
Q ss_pred ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCC
Q 026967 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (230)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (230)
+.+.+..+++++.+.|..-+.+.-- .| .....+.++..+-+..+++......+ +++|-+..-.-+..++....
T Consensus 26 D~~~l~~li~~l~~~Gv~Gi~~~Gs-tG-----E~~~Lt~eEr~~~~~~~~~~~~~~~p-vi~gv~~~t~~~i~~~~~a~ 98 (303)
T PRK03620 26 DEAAYREHLEWLAPYGAAALFAAGG-TG-----EFFSLTPDEYSQVVRAAVETTAGRVP-VIAGAGGGTAQAIEYAQAAE 98 (303)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcC-Cc-----CcccCCHHHHHHHHHHHHHHhCCCCc-EEEecCCCHHHHHHHHHHHH
Confidence 3446788999999999888876522 12 23344667777777777777654423 33455432223444443321
Q ss_pred -cccceEEEeccccC
Q 026967 187 -QKISKAIFLCATMV 200 (230)
Q Consensus 187 -~~v~~vv~i~~~~~ 200 (230)
-.+++++++.|+..
T Consensus 99 ~~Gadav~~~pP~y~ 113 (303)
T PRK03620 99 RAGADGILLLPPYLT 113 (303)
T ss_pred HhCCCEEEECCCCCC
Confidence 24788877766544
No 395
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=20.12 E-value=2.1e+02 Score=23.74 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=24.1
Q ss_pred eEEEECCCCCChhhHHHHHHHHHHCCCeEEEeC
Q 026967 97 KFVLIHGEGFGAWCWYKTVASLEEVGLIPTALD 129 (230)
Q Consensus 97 ~vvliHG~~~~~~~~~~~~~~L~~~G~~vi~~D 129 (230)
.|+++-|-|.+..+=.-.+++|...||.|.++-
T Consensus 62 ~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 466666666666555568889998999988775
No 396
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=20.09 E-value=6.6e+02 Score=22.77 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=15.6
Q ss_pred HHHHHHHCCCeEEEeCCCCCC
Q 026967 114 TVASLEEVGLIPTALDLKGSG 134 (230)
Q Consensus 114 ~~~~L~~~G~~vi~~D~~G~G 134 (230)
.++.+...+|.++.+|-+|..
T Consensus 174 al~~~~~~~~DvVIIDTaGr~ 194 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAGRL 194 (428)
T ss_pred HHHHHHhcCCCEEEEeCCCcc
Confidence 444555678999999988765
No 397
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=20.06 E-value=5.1e+02 Score=21.42 Aligned_cols=59 Identities=17% Similarity=0.152 Sum_probs=34.6
Q ss_pred cceEEEECCCCCChhh-HHHHHHHHHHCCC-eEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEE
Q 026967 95 YKKFVLIHGEGFGAWC-WYKTVASLEEVGL-IPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVIL 168 (230)
Q Consensus 95 ~~~vvliHG~~~~~~~-~~~~~~~L~~~G~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 168 (230)
..+|++.||-...+.. |..+--.|.+.|| .|+....-|+. . ++++.+.++.-+.. +|.|
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP----------~----~d~vi~~l~~~~~~-~v~L 198 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP----------L----VDTVIEYLRKNGIK-EVHL 198 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC----------c----HHHHHHHHHHcCCc-eEEE
Confidence 3467788998776654 4455556778888 55555433322 1 34555666665554 4443
No 398
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=20.06 E-value=4.4e+02 Score=20.69 Aligned_cols=72 Identities=13% Similarity=0.044 Sum_probs=39.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEc-hhHHHHHHHHHhCCcccc
Q 026967 112 YKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHS-SGGACVSYALEHFPQKIS 190 (230)
Q Consensus 112 ~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS-~Gg~~a~~~a~~~p~~v~ 190 (230)
..+.++|.+.||.|+=+-. .. ....++.+++..+...+..-..+ .-++++.| .|- ..+|.++|. |.
T Consensus 16 ~~l~~~L~~~G~eV~D~G~-----~~---~~~~dYpd~a~~va~~V~~g~~~-~GIliCGTGiG~---siaANKv~G-IR 82 (171)
T TIGR01119 16 MEVSEFLKSKGYEVLDVGT-----YD---FTRTHYPIFGKKVGEAVVSGEAD-LGVCICGTGVGI---NNAVNKVPG-VR 82 (171)
T ss_pred HHHHHHHHHCCCEEEEeCC-----CC---CCCCChHHHHHHHHHHHHcCCCC-EEEEEcCCcHHH---HHHHhcCCC-eE
Confidence 4588999999998854321 11 11235788888888777654444 44444333 332 233444443 44
Q ss_pred eEEEec
Q 026967 191 KAIFLC 196 (230)
Q Consensus 191 ~vv~i~ 196 (230)
+.+..+
T Consensus 83 AAl~~d 88 (171)
T TIGR01119 83 SALVRD 88 (171)
T ss_pred EEEeCC
Confidence 444444
No 399
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=20.05 E-value=5.3e+02 Score=21.67 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHHHCCCeEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEEEchhHHHHHHHHHhCC
Q 026967 107 GAWCWYKTVASLEEVGLIPTALDLKGSGIDLSDTNSVTTLAEYSKPLLDYLENLLEDEKVILVGHSSGGACVSYALEHFP 186 (230)
Q Consensus 107 ~~~~~~~~~~~L~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 186 (230)
+.+.+..+++++.+.|..-+.+--- .| .....+.++..+-+..+++......+ +++|-+.+-.-+..++....
T Consensus 19 D~~~l~~l~~~l~~~Gv~gi~v~Gs-tG-----E~~~Ls~eEr~~l~~~~~~~~~~~~p-vi~gv~~~t~~~i~~a~~a~ 91 (289)
T cd00951 19 DEDAYRAHVEWLLSYGAAALFAAGG-TG-----EFFSLTPDEYAQVVRAAVEETAGRVP-VLAGAGYGTATAIAYAQAAE 91 (289)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcC-Cc-----CcccCCHHHHHHHHHHHHHHhCCCCC-EEEecCCCHHHHHHHHHHHH
Confidence 3445778889999999887776522 22 23334667776667777777654323 33444433333444443321
Q ss_pred -cccceEEEeccccCC
Q 026967 187 -QKISKAIFLCATMVS 201 (230)
Q Consensus 187 -~~v~~vv~i~~~~~~ 201 (230)
..+++++++.|....
T Consensus 92 ~~Gad~v~~~pP~y~~ 107 (289)
T cd00951 92 KAGADGILLLPPYLTE 107 (289)
T ss_pred HhCCCEEEECCCCCCC
Confidence 247888777665543
Done!