Query 026969
Match_columns 230
No_of_seqs 23 out of 25
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 04:21:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026969.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026969hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2csba1 a.60.2.4 (A:351-409) T 65.8 0.79 5.7E-05 31.0 0.6 28 87-114 11-46 (59)
2 d1eija_ a.5.6.1 (A:) Hypotheti 49.8 12 0.00086 25.8 4.6 39 173-211 19-67 (72)
3 d2crua1 a.5.6.1 (A:8-112) Prog 45.0 13 0.00095 27.0 4.5 40 172-211 41-90 (105)
4 d1wa8b1 a.25.3.1 (B:602-695) E 23.3 93 0.0068 20.2 5.8 42 143-184 23-69 (94)
5 d2cyya1 a.4.5.32 (A:5-64) Puta 22.9 17 0.0012 22.7 1.5 14 199-212 2-15 (60)
6 d2isya2 a.76.1.1 (A:65-140) Ir 21.3 52 0.0038 21.7 4.0 41 96-136 17-61 (76)
7 d1sqwa1 b.122.1.1 (A:95-170) N 20.5 13 0.00091 26.2 0.5 16 1-16 42-57 (76)
8 d1i1ga1 a.4.5.32 (A:2-61) LprA 18.2 23 0.0017 22.2 1.5 14 199-212 2-15 (60)
9 d2f7fa2 d.41.2.1 (A:4-140) Put 17.9 67 0.0049 23.1 4.2 37 93-129 53-89 (137)
10 d2cg4a1 a.4.5.32 (A:4-66) Regu 17.8 25 0.0018 22.1 1.5 14 199-212 4-17 (63)
No 1
>d2csba1 a.60.2.4 (A:351-409) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=65.79 E-value=0.79 Score=31.02 Aligned_cols=28 Identities=46% Similarity=0.787 Sum_probs=21.4
Q ss_pred CCCCCCHHHHHHHh------hcCchhhhH--HHHHh
Q 026969 87 RVLPDTAEEMIEYF------LDTEAQELE--FEIAR 114 (230)
Q Consensus 87 Rv~Pdt~~~LIEyf------LdTea~EmE--yEiaR 114 (230)
-.-||..++||||| |-|+.+||| ||-.|
T Consensus 11 glspdaadeliehfesiagilatdleeiermyeegr 46 (59)
T d2csba1 11 GLSPDAADELIEHFESIAGILATDLEEIERMYEEGR 46 (59)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHTSCHHHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHHccc
Confidence 34588899999998 668888887 45444
No 2
>d1eija_ a.5.6.1 (A:) Hypothetical protein MTH1615 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=49.84 E-value=12 Score=25.81 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhch-----hhHHHHHHHHHhchh-----hHHHHHHHHH
Q 026969 173 ITARKSLTKILTSK-----DVKATLLELVEQNKI-----NRSLLTLLDE 211 (230)
Q Consensus 173 ~~akerl~kiLtsk-----D~KatlLEMve~nEi-----d~sLlaLLde 211 (230)
-.|++||..|--+| .+.+.|+.|+.+|.| |..|..||++
T Consensus 19 ~eAreRL~~i~lvkPekA~~vE~~liqlaq~G~i~~kisd~~L~~iL~~ 67 (72)
T d1eija_ 19 PEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKR 67 (72)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHCCSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 35899999998866 555678889999987 6677777764
No 3
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.04 E-value=13 Score=27.02 Aligned_cols=40 Identities=20% Similarity=0.383 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhch-----hhHHHHHHHHHhchh-----hHHHHHHHHH
Q 026969 172 LITARKSLTKILTSK-----DVKATLLELVEQNKI-----NRSLLTLLDE 211 (230)
Q Consensus 172 l~~akerl~kiLtsk-----D~KatlLEMve~nEi-----d~sLlaLLde 211 (230)
+-.|++||..|--+| .+.+.|+.|+.+|.| |..|..||+.
T Consensus 41 t~eAreRL~rI~lvkPe~A~~VE~~liqlaq~G~i~~kisd~~Lk~iL~~ 90 (105)
T d2crua1 41 DQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKK 90 (105)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCCSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHhhcccCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 346899998888766 567788999999988 6788888875
No 4
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.34 E-value=93 Score=20.23 Aligned_cols=42 Identities=24% Similarity=0.270 Sum_probs=28.0
Q ss_pred hhhHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhh
Q 026969 143 DMEDRLIELEALQKALL-----EGTEAYDNMQADLITARKSLTKILT 184 (230)
Q Consensus 143 ~~Edrl~ELEAL~k~l~-----eg~EayDk~~~~l~~akerl~kiLt 184 (230)
.++..|.+|+..-..|. .+-++|+..+...-.+-..|..+|.
T Consensus 23 ~i~~~l~~L~~~~~~l~~~W~G~A~~af~~~~~~W~~~~~~l~~~L~ 69 (94)
T d1wa8b1 23 SIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQ 69 (94)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSCSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555444444433333 2337999999999988888888886
No 5
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.92 E-value=17 Score=22.74 Aligned_cols=14 Identities=14% Similarity=0.688 Sum_probs=13.0
Q ss_pred chhhHHHHHHHHHh
Q 026969 199 NKINRSLLTLLDEN 212 (230)
Q Consensus 199 nEid~sLlaLLdeN 212 (230)
+++|+.||.+|++|
T Consensus 2 D~~D~~Il~~L~~n 15 (60)
T d2cyya1 2 DEIDKKIIKILQND 15 (60)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHc
Confidence 68999999999999
No 6
>d2isya2 a.76.1.1 (A:65-140) Iron-dependent regulator {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.27 E-value=52 Score=21.67 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=33.8
Q ss_pred HHHHhh-c---CchhhhHHHHHhhccCCCHHHHHHHHHHhchhhh
Q 026969 96 MIEYFL-D---TEAQELEFEIARLRPRLNQEFFSHLKFELGQLRF 136 (230)
Q Consensus 96 LIEyfL-d---Tea~EmEyEiaRcRPrLt~~Ff~~L~~ei~~~rf 136 (230)
|+|.|| + -+..+.+-+.-++-.-++++++..|..-++..++
T Consensus 17 lle~fL~~~lgv~~~~a~~~A~~iEH~is~e~~~~L~~~l~~p~~ 61 (76)
T d2isya2 17 LAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTT 61 (76)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHTTTCCHHHHHHHHHHTTSCCB
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhccCCHHHHHHHHHHhCCCCC
Confidence 667666 3 5667888999999999999999999998877643
No 7
>d1sqwa1 b.122.1.1 (A:95-170) Nip7p homolog, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46 E-value=13 Score=26.22 Aligned_cols=16 Identities=38% Similarity=0.750 Sum_probs=11.1
Q ss_pred Ccccccccccccchhh
Q 026969 1 MAALSLGLGIASTAIT 16 (230)
Q Consensus 1 ~~~~~l~~g~~~~~~~ 16 (230)
|.-++||||+++.+-+
T Consensus 42 m~D~PLGFGvaakst~ 57 (76)
T d1sqwa1 42 MADIPLGFGVAAKSTQ 57 (76)
T ss_dssp TTCCEEEEEEESSCHH
T ss_pred CCCCccceeeeccCHH
Confidence 4567999999655433
No 8
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=18.23 E-value=23 Score=22.22 Aligned_cols=14 Identities=14% Similarity=0.565 Sum_probs=12.9
Q ss_pred chhhHHHHHHHHHh
Q 026969 199 NKINRSLLTLLDEN 212 (230)
Q Consensus 199 nEid~sLlaLLdeN 212 (230)
+++|+-||.+|++|
T Consensus 2 D~~D~kIl~~L~~n 15 (60)
T d1i1ga1 2 DERDKIILEILEKD 15 (60)
T ss_dssp CSHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHc
Confidence 57899999999999
No 9
>d2f7fa2 d.41.2.1 (A:4-140) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}
Probab=17.86 E-value=67 Score=23.13 Aligned_cols=37 Identities=16% Similarity=0.276 Sum_probs=22.8
Q ss_pred HHHHHHHhhcCchhhhHHHHHhhccCCCHHHHHHHHH
Q 026969 93 AEEMIEYFLDTEAQELEFEIARLRPRLNQEFFSHLKF 129 (230)
Q Consensus 93 ~~~LIEyfLdTea~EmEyEiaRcRPrLt~~Ff~~L~~ 129 (230)
-+++|+|+-+--..+=|.+=-|--|-++++|+.+|+.
T Consensus 53 L~~~l~~l~~l~ft~eei~yL~~~~~~~~~fl~~L~~ 89 (137)
T d2f7fa2 53 LERLVNYLENLTFTESDIAYLREVEEYPEDFLTYLAN 89 (137)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHTSCCCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHhCCCCCHHHHHHHHh
Confidence 3556666655333332332234558999999999975
No 10
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=17.80 E-value=25 Score=22.13 Aligned_cols=14 Identities=29% Similarity=0.539 Sum_probs=13.0
Q ss_pred chhhHHHHHHHHHh
Q 026969 199 NKINRSLLTLLDEN 212 (230)
Q Consensus 199 nEid~sLlaLLdeN 212 (230)
+++|+-+|.+|++|
T Consensus 4 D~~D~~IL~~L~~~ 17 (63)
T d2cg4a1 4 DNLDRGILEALMGN 17 (63)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHc
Confidence 68999999999999
Done!