Query 026971
Match_columns 230
No_of_seqs 143 out of 1192
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:11:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026971.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026971hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02364 L-ascorbate peroxidas 100.0 2.1E-70 4.5E-75 479.1 20.4 229 1-230 1-250 (250)
2 PLN02879 L-ascorbate peroxidas 100.0 5.5E-70 1.2E-74 475.9 20.8 228 1-229 2-249 (251)
3 PLN02608 L-ascorbate peroxidas 100.0 1.1E-68 2.4E-73 475.1 20.5 224 5-229 3-246 (289)
4 cd00691 ascorbate_peroxidase A 100.0 7.4E-65 1.6E-69 445.3 19.4 214 15-229 12-252 (253)
5 PLN03030 cationic peroxidase; 100.0 1.8E-64 4E-69 453.9 15.3 211 2-229 31-310 (324)
6 cd00693 secretory_peroxidase H 100.0 4.9E-63 1.1E-67 442.8 17.1 209 2-229 8-285 (298)
7 cd00692 ligninase Ligninase an 100.0 8.8E-57 1.9E-61 405.4 19.0 209 19-229 20-277 (328)
8 cd00314 plant_peroxidase_like 100.0 7.3E-53 1.6E-57 369.7 17.1 198 26-224 11-255 (255)
9 cd00649 catalase_peroxidase_1 100.0 4.3E-52 9.2E-57 381.0 15.3 220 8-228 36-396 (409)
10 PF00141 peroxidase: Peroxidas 100.0 3E-53 6.5E-58 367.7 6.5 179 12-207 1-230 (230)
11 TIGR00198 cat_per_HPI catalase 100.0 3.9E-49 8.5E-54 381.7 14.8 211 14-225 52-398 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.5E-46 3.3E-51 362.1 15.7 216 8-224 48-403 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.1E-44 2.4E-49 316.8 11.2 189 28-224 37-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 5.8E-43 1.3E-47 309.5 16.4 200 26-226 23-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 2E-38 4.4E-43 307.3 16.4 210 13-226 431-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 9.4E-38 2E-42 301.3 15.8 200 26-226 448-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 4.1E-34 9E-39 266.0 13.6 218 9-227 62-417 (730)
18 COG0376 KatG Catalase (peroxid 99.7 1.8E-17 4E-22 155.3 10.7 201 25-226 457-725 (730)
19 PF08383 Maf_N: Maf N-terminal 32.2 28 0.0006 21.5 1.2 15 147-161 19-34 (35)
20 PRK05264 transcriptional repre 29.9 42 0.00091 25.3 2.0 31 190-220 35-67 (105)
21 cd00490 Met_repressor_MetJ Met 29.4 43 0.00094 25.1 2.0 31 190-220 34-66 (103)
22 cd07922 CarBa CarBa is the A s 28.9 29 0.00064 25.4 1.1 36 191-229 13-59 (81)
23 PRK13859 type IV secretion sys 27.5 48 0.001 22.3 1.7 31 96-126 9-42 (55)
24 cd00957 Transaldolase_TalAB Tr 23.7 65 0.0014 29.5 2.5 55 108-163 168-238 (313)
25 PRK12346 transaldolase A; Prov 23.4 63 0.0014 29.6 2.4 57 108-165 169-241 (316)
26 PTZ00411 transaldolase-like pr 23.3 60 0.0013 30.0 2.2 57 108-165 180-252 (333)
27 COG3060 MetJ Transcriptional r 21.8 83 0.0018 23.4 2.3 32 189-220 34-67 (105)
28 TIGR01911 HesB_rel_seleno HesB 20.6 23 0.00049 26.3 -0.9 35 18-62 9-44 (92)
29 KOG0400 40S ribosomal protein 20.2 48 0.001 26.7 0.8 42 129-171 20-66 (151)
No 1
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.1e-70 Score=479.10 Aligned_cols=229 Identities=83% Similarity=1.347 Sum_probs=219.0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHhhhcccCCchHHHHHH
Q 026971 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (230)
Q Consensus 1 ~~~~cp~~e~~v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (230)
|+|.||.+.+.+++++++++++|++++.++.++|.+|||+||||++||.....|||||||++.+|+++++|.||.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~ 80 (250)
T PLN02364 1 MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRL 80 (250)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHhCCCCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHh-cCCChhhhHHh
Q 026971 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQ-MGLSDKDIVAL 159 (230)
Q Consensus 81 i~~ik~~~~~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~~~~~~~~l~~~F~~~-~Gl~~~elVaL 159 (230)
|++||+++++|||||||+||||+||+++|||.|+|++||+|+++++++++||.|+.++++|++.| +. +||+++|||+|
T Consensus 81 i~~ik~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~lP~p~~~~~~l~~~F-~~~~Gl~~~d~VaL 159 (250)
T PLN02364 81 LDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVF-AKQMGLSDKDIVAL 159 (250)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccccCCCCCCCcCHHHHHHHH-HHhcCCCHHHheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 75 69999999999
Q ss_pred hcccccccccccc--------------------hhhcccCCCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHHH
Q 026971 160 SGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 219 (230)
Q Consensus 160 ~GaHtiG~~~~~~--------------------~ll~~~~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am 219 (230)
+||||||++||.+ +|+.+..+|+++|+||+.|+.|++|+.+|+.||.||+.|+++|+.||
T Consensus 160 sGaHTiG~~hc~r~~~~g~~~~tp~~fDn~Yy~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am 239 (250)
T PLN02364 160 SGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAH 239 (250)
T ss_pred ecceeeccccCCCCCCCCCCCCCCCccchHHHHHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHH
Confidence 9999999999953 55654448999899999999999999999999999999999999999
Q ss_pred HHHHhCCCCCC
Q 026971 220 LKLSELGFAEA 230 (230)
Q Consensus 220 ~Km~~igv~~~ 230 (230)
+||++||++++
T Consensus 240 ~Km~~lg~~~~ 250 (250)
T PLN02364 240 MKLSELGFADA 250 (250)
T ss_pred HHHHccCCCCC
Confidence 99999999874
No 2
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=5.5e-70 Score=475.93 Aligned_cols=228 Identities=78% Similarity=1.314 Sum_probs=219.4
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHhhhcccCCchHHHHHH
Q 026971 1 MTKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRL 80 (230)
Q Consensus 1 ~~~~cp~~e~~v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~ 80 (230)
|.|.||.+-+.++++++.++++|+++++++.++|.+|||+||||++||..+++|||||||++.+|+++|+|.||+.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~ 81 (251)
T PLN02879 2 VKKSYPEVKEEYKKAVQRCKRKLRGLIAEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRL 81 (251)
T ss_pred CcccCCCccHHHHHHHHHHHHHHHHHHhCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHHHHHhCCCCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhh
Q 026971 81 LEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS 160 (230)
Q Consensus 81 i~~ik~~~~~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~ 160 (230)
|++||+++++|||||||+|||++||+++|||.|+|++||+|+.+++++++||.|+.+++++++.| +++||+++|||||+
T Consensus 82 i~~iK~~~~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~~~~lP~p~~~~~~l~~~F-~~~Gl~~~dlVALs 160 (251)
T PLN02879 82 LDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVF-GRMGLNDKDIVALS 160 (251)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccccccccccc--------------------hhhcccCCCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHHHH
Q 026971 161 GGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHL 220 (230)
Q Consensus 161 GaHtiG~~~~~~--------------------~ll~~~~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~ 220 (230)
||||||++||.| +|+.+..+|+++|+||++|+.|++|+++|++||.||++|+++|+.||+
T Consensus 161 GaHTiG~ah~~r~g~~g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~ 240 (251)
T PLN02879 161 GGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHL 240 (251)
T ss_pred ccccccccccccccCCCCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 999999999964 555444489999999999999999999999999999999999999999
Q ss_pred HHHhCCCCC
Q 026971 221 KLSELGFAE 229 (230)
Q Consensus 221 Km~~igv~~ 229 (230)
||++||+.+
T Consensus 241 KL~~lg~~~ 249 (251)
T PLN02879 241 KLSELGFAD 249 (251)
T ss_pred HHHccCCCC
Confidence 999999976
No 3
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.1e-68 Score=475.10 Aligned_cols=224 Identities=69% Similarity=1.123 Sum_probs=213.6
Q ss_pred CCChHHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHhhhcccCCchHHHHHHHHHH
Q 026971 5 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPF 84 (230)
Q Consensus 5 cp~~e~~v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~i 84 (230)
.|.+...|-.+|+.+|++|+++++++.++|.+|||+||||++||.+++.|||||||++.+|+++++|.||++++++|++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~i 82 (289)
T PLN02608 3 APVVDAEYLKEIEKARRDLRALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPV 82 (289)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHH
Confidence 47888888999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHhCCCCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhhcccc
Q 026971 85 KEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHT 164 (230)
Q Consensus 85 k~~~~~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHt 164 (230)
|+++|+|||||||+||||+||+++|||.|+|++||+|+++++++++||.|+.+++++++.| +++||+++|||+|+||||
T Consensus 83 K~~~~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~LP~p~~~~~~l~~~F-~~~Gl~~~D~VaLsGAHT 161 (289)
T PLN02608 83 KAKHPKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPEEGRLPDAKKGAKHLRDVF-YRMGLSDKDIVALSGGHT 161 (289)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCccCCCcCCCCCHHHHHHHH-HHcCCCHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999988889999999999999999 999999999999999999
Q ss_pred cccccccc--------------------hhhcccCCCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHh
Q 026971 165 LGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 224 (230)
Q Consensus 165 iG~~~~~~--------------------~ll~~~~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~ 224 (230)
||++||.+ +++.+..+|+++|+||++|+.|++|+++|+.||.||++|+++|+.||+||++
T Consensus 162 iG~ahc~r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~ 241 (289)
T PLN02608 162 LGRAHPERSGFDGPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSE 241 (289)
T ss_pred cccccccCCCCCCCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHc
Confidence 99999964 4554333799889999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 026971 225 LGFAE 229 (230)
Q Consensus 225 igv~~ 229 (230)
|||.+
T Consensus 242 lgvlt 246 (289)
T PLN02608 242 LGFTP 246 (289)
T ss_pred CCCCC
Confidence 99976
No 4
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=7.4e-65 Score=445.33 Aligned_cols=214 Identities=63% Similarity=1.075 Sum_probs=194.8
Q ss_pred HHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHhhhcccCCchHHHHHHHHHHHHhCCCCcHH
Q 026971 15 AVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYA 94 (230)
Q Consensus 15 ~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~ik~~~~~VS~A 94 (230)
.+..+|+.++++++++.++|.+|||+|||||+||.+.+.|||||++++.+|+++++|.+|.+++++|++||+++|+||||
T Consensus 12 ~~~~V~~~v~~~~~~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~~~VScA 91 (253)
T cd00691 12 DLEAARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKYPDISYA 91 (253)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHcCCCCHH
Confidence 34444555555555999999999999999999999999999999999889999999999988999999999999999999
Q ss_pred HHHhhhhcccccccCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhhccccccccccc
Q 026971 95 DLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP---QEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKE 171 (230)
Q Consensus 95 Diialaa~~av~~~GgP~~~v~~GR~D~~~s~---~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHtiG~~~~~ 171 (230)
|||++|||+||+.+|||.|+|++||+|+.++. ++++||.|+.+++++++.| +++||+++|||+|+||||||++||.
T Consensus 92 DilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~d~VaLsGaHTiG~a~c~ 170 (253)
T cd00691 92 DLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVF-YRMGFNDQEIVALSGAHTLGRCHKE 170 (253)
T ss_pred HHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHH-HhcCCCHHHHHHhcccceeeccccc
Confidence 99999999999999999999999999999986 6789999999999999999 9999999999999999999999994
Q ss_pred c--------------------hhhcccC----CCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHhCCC
Q 026971 172 R--------------------ELLTGEK----DGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGF 227 (230)
Q Consensus 172 ~--------------------~ll~~~~----~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~igv 227 (230)
+ +|+.+.. +++++|+||++|+.|++|+++|+.||.|+++|+++|+.||+||+++||
T Consensus 171 ~~~~~g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v 250 (253)
T cd00691 171 RSGYDGPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGV 250 (253)
T ss_pred CCCCCCCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCC
Confidence 3 5554322 345567999999999999999999999999999999999999999999
Q ss_pred CC
Q 026971 228 AE 229 (230)
Q Consensus 228 ~~ 229 (230)
++
T Consensus 251 ~~ 252 (253)
T cd00691 251 PF 252 (253)
T ss_pred CC
Confidence 75
No 5
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.8e-64 Score=453.87 Aligned_cols=211 Identities=27% Similarity=0.411 Sum_probs=191.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccCh---HhhhcccCCchHHHH
Q 026971 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLA---AEQAHSANNGLDIAV 78 (230)
Q Consensus 2 ~~~cp~~e~~v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~---~E~~~~~N~gl~~~~ 78 (230)
.++||.+|+||+++|.++ +.+|++++|++|||+|||||+ +||||||++. +|+++++|.+|+ +|
T Consensus 31 ~~sCP~aE~iV~~~v~~~------~~~d~~~aa~llRL~FHDCfv-------~GCDaSvLl~~~~~Ek~a~~N~~l~-Gf 96 (324)
T PLN03030 31 STTCPQAESIVRKTVQSH------FQSNPAIAPGLLRMHFHDCFV-------RGCDASILIDGSNTEKTALPNLLLR-GY 96 (324)
T ss_pred hCcCCCHHHHHHHHHHHH------HhhCcccchhhhhhhhhhhee-------cCCceEEeeCCCcccccCCCCcCcc-hH
Confidence 579999999999999996 999999999999999999998 9999999884 799999999994 89
Q ss_pred HHHHHHHHh----CC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHhcCC
Q 026971 79 RLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP--QEGRLPDAKQGNDHLRQVFGAQMGL 151 (230)
Q Consensus 79 ~~i~~ik~~----~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~--~~~~lP~~~~~~~~l~~~F~~~~Gl 151 (230)
++|+.||++ || +|||||||++|||+||.++|||.|+|++||+|+.+|. ...+||.|+.+++++++.| +++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F-~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKF-AAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHH-HHcCC
Confidence 999999975 99 8999999999999999999999999999999998874 3458999999999999999 99999
Q ss_pred ChhhhHHhhcccccccccccc---hhh-------------------------------------c--------c------
Q 026971 152 SDKDIVALSGGHTLGRCHKER---ELL-------------------------------------T--------G------ 177 (230)
Q Consensus 152 ~~~elVaL~GaHtiG~~~~~~---~ll-------------------------------------~--------~------ 177 (230)
+.+|||+|+||||||++||.. +|. + +
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 999999999999999999963 110 0 0
Q ss_pred -cCCCccccccchhcccCCCcHHHHHHHhhCh----HHHHHHHHHHHHHHHhCCCCC
Q 026971 178 -EKDGLLQLPSDKALLDDPVFRPLVEKYAADE----DAFFADYAEAHLKLSELGFAE 229 (230)
Q Consensus 178 -~~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~----~~F~~~F~~Am~Km~~igv~~ 229 (230)
.++|+ |+|||+|++|++|+++|++||.|+ ++|+++|+.||+|||+|||.+
T Consensus 256 l~~rGl--L~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlT 310 (324)
T PLN03030 256 KNGRGI--LESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKT 310 (324)
T ss_pred HhcCCC--cCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCC
Confidence 24455 499999999999999999999875 599999999999999999976
No 6
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=4.9e-63 Score=442.80 Aligned_cols=209 Identities=34% Similarity=0.536 Sum_probs=191.7
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccC------hHhhhcccCCchH
Q 026971 2 TKNYPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL------AAEQAHSANNGLD 75 (230)
Q Consensus 2 ~~~cp~~e~~v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~------~~E~~~~~N~gl~ 75 (230)
.++||+||++|+++|+++ +.++++++|++|||+|||||+ +||||||++ .+|+++++|.++
T Consensus 8 ~~sCP~~e~iV~~~v~~~------~~~~~~~a~~~lRl~FHDc~v-------~GcDaSill~~~~~~~~E~~~~~N~~l- 73 (298)
T cd00693 8 SKSCPNAESIVRSVVRAA------VKADPRLAAALLRLHFHDCFV-------RGCDASVLLDSTANNTSEKDAPPNLSL- 73 (298)
T ss_pred cCCCCChHHHHHHHHHHH------HHhCCCcCchhhhhhhHhhhc-------cCcceeEEecCCCCCchhccCCCCCCc-
Confidence 579999999999999996 999999999999999999998 999999986 369999999999
Q ss_pred HHHHHHHHHHHh----CC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHh
Q 026971 76 IAVRLLEPFKEQ----FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ--EGRLPDAKQGNDHLRQVFGAQ 148 (230)
Q Consensus 76 ~~~~~i~~ik~~----~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~--~~~lP~~~~~~~~l~~~F~~~ 148 (230)
+++++|++||++ || +|||||||+||||+||+.+|||.|+|++||+|+..+.+ .++||.|+.+++++++.| ++
T Consensus 74 ~g~~~i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~ 152 (298)
T cd00693 74 RGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLF-AS 152 (298)
T ss_pred chhHHHHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccccCCCCcccCHHHHHHHH-HH
Confidence 489999999975 88 89999999999999999999999999999999987643 368999999999999999 99
Q ss_pred cCCChhhhHHhhcccccccccccc--------------------------------------------------------
Q 026971 149 MGLSDKDIVALSGGHTLGRCHKER-------------------------------------------------------- 172 (230)
Q Consensus 149 ~Gl~~~elVaL~GaHtiG~~~~~~-------------------------------------------------------- 172 (230)
+||+++|||+|+||||||++||..
T Consensus 153 ~G~~~~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 232 (298)
T cd00693 153 KGLTVTDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYK 232 (298)
T ss_pred cCCCHHHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHH
Confidence 999999999999999999999951
Q ss_pred hhhcccCCCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHhCCCCC
Q 026971 173 ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 229 (230)
Q Consensus 173 ~ll~~~~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~igv~~ 229 (230)
+|+ .++|+ |+||++|+.|++|+++|++||.||++|+++|+.||+||+++||.+
T Consensus 233 ~l~--~~~gl--L~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~t 285 (298)
T cd00693 233 NLL--AGRGL--LTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLT 285 (298)
T ss_pred HHH--hcccC--ccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCcc
Confidence 111 13454 599999999999999999999999999999999999999999976
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.8e-57 Score=405.38 Aligned_cols=209 Identities=32% Similarity=0.476 Sum_probs=181.9
Q ss_pred HHHHHhhHhh-cCCc---hHHHHHHHhhhcCcccc-----CCCCCCCCccccCh--HhhhcccCCchHHHHHHHHHHHHh
Q 026971 19 CKRKLRGFIA-EKNC---APLMLRIAWHSAGTYDV-----KTKTGGPFGTMRLA--AEQAHSANNGLDIAVRLLEPFKEQ 87 (230)
Q Consensus 19 ~~~~i~~~~~-~~~~---a~~~lRl~FHDc~~~d~-----~~~~gG~dgsi~~~--~E~~~~~N~gl~~~~~~i~~ik~~ 87 (230)
++.+|++.+. ++.+ |+.+|||+||||++||. ..+.|||||||++. .|+++++|.||+..++.|.+++++
T Consensus 20 v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~~vvd~lk~~~e~ 99 (328)
T cd00692 20 ILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLDEIVEALRPFHQK 99 (328)
T ss_pred HHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHHHHHHHHHHHHHh
Confidence 3445554543 5554 66699999999999994 56789999999874 599999999998777777777777
Q ss_pred CCCCcHHHHHhhhhccccc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhhcccccc
Q 026971 88 FPTISYADLYQLAGVVGVE-VTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLG 166 (230)
Q Consensus 88 ~~~VS~ADiialaa~~av~-~~GgP~~~v~~GR~D~~~s~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaHtiG 166 (230)
++ |||||||+|||++||+ ++|||.|+|++||+|++++.++++||.|+.++++|++.| +++||+++|||+|+||||||
T Consensus 100 ~c-VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~g~LP~p~~sv~~l~~~F-~~~Gf~~~E~VaLsGAHTiG 177 (328)
T cd00692 100 HN-VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPDGLVPEPFDSVDKILARF-ADAGFSPDELVALLAAHSVA 177 (328)
T ss_pred cC-cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcccCCCCCCCCHHHHHHHH-HHcCCCHHHHhhhccccccc
Confidence 65 9999999999999999 579999999999999999999999999999999999999 99999999999999999999
Q ss_pred cccccc---------------------hhh-ccc---------------CCCccccccchhcccCCCcHHHHHHHhhChH
Q 026971 167 RCHKER---------------------ELL-TGE---------------KDGLLQLPSDKALLDDPVFRPLVEKYAADED 209 (230)
Q Consensus 167 ~~~~~~---------------------~ll-~~~---------------~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~ 209 (230)
++|... +++ .+. ..|+++|+||++|+.|++|+.+|+.||+||+
T Consensus 178 ~a~~~Dps~~g~p~D~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~ 257 (328)
T cd00692 178 AQDFVDPSIAGTPFDSTPGVFDTQFFIETLLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQA 257 (328)
T ss_pred ccCCCCCCCCCCCCCCCcchhcHHHHHHHHHcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHH
Confidence 998521 433 211 2367789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q 026971 210 AFFADYAEAHLKLSELGFAE 229 (230)
Q Consensus 210 ~F~~~F~~Am~Km~~igv~~ 229 (230)
+|+++|+.||+||++|||+.
T Consensus 258 ~f~~~Fa~Am~KLs~lgv~~ 277 (328)
T cd00692 258 KMNAAFAAAMLKLSLLGQDN 277 (328)
T ss_pred HHHHHHHHHHHHHHcCCCCc
Confidence 99999999999999999985
No 8
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=7.3e-53 Score=369.68 Aligned_cols=198 Identities=46% Similarity=0.727 Sum_probs=180.5
Q ss_pred HhhcCCchHHHHHHHhhhcCccccCC-CCCCCCccccChHhhhcccCCchHHHHHHHHHHHHhCC---CCcHHHHHhhhh
Q 026971 26 FIAEKNCAPLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFP---TISYADLYQLAG 101 (230)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~-~~gG~dgsi~~~~E~~~~~N~gl~~~~~~i~~ik~~~~---~VS~ADiialaa 101 (230)
+.+++.+++++|||+||||++|+... ..|||||||++.+|+++|+|.+|.+++++|++||++++ +|||||||++|+
T Consensus 11 ~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~~~~vS~ADlialAa 90 (255)
T cd00314 11 ITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDGGNPVSRADLIALAG 90 (255)
T ss_pred HHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCCCCcccHHHHHHHHH
Confidence 44588999999999999999999886 78999999999999999999998889999999999985 799999999999
Q ss_pred ccccccc--CCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhh-ccccc-ccccccc
Q 026971 102 VVGVEVT--GGPDIPFHPGRDDKA-----EPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTL-GRCHKER 172 (230)
Q Consensus 102 ~~av~~~--GgP~~~v~~GR~D~~-----~s~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHti-G~~~~~~ 172 (230)
++||+.+ |||.|+|++||+|++ .+.|.+++|.++.+++++++.| .++||+++|||||+ |+||| |++||..
T Consensus 91 ~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F-~~~Gl~~~e~VAL~~GaHti~G~~~~~~ 169 (255)
T cd00314 91 AVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKF-KRMGLSPSELVALSAGAHTLGGKNHGDL 169 (255)
T ss_pred HHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHH-HHcCCCHHHHHhhccCCeeccCcccCCC
Confidence 9999999 999999999999998 5667888999999999999999 99999999999999 99999 9999962
Q ss_pred ----------------------hhhccc------------CCCccccccchhcccCCCcHHHHHHHhhChHHHHHHHHHH
Q 026971 173 ----------------------ELLTGE------------KDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFADYAEA 218 (230)
Q Consensus 173 ----------------------~ll~~~------------~~gl~~l~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~A 218 (230)
+++++. ..++.+|+||+.|+.|++|+.+|+.||.|+++|+++|++|
T Consensus 170 ~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a 249 (255)
T cd00314 170 LNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKA 249 (255)
T ss_pred CCcccCCCCCCCCCccchHHHHHHhcCCcccccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHH
Confidence 444321 1234567999999999999999999999999999999999
Q ss_pred HHHHHh
Q 026971 219 HLKLSE 224 (230)
Q Consensus 219 m~Km~~ 224 (230)
|+||++
T Consensus 250 ~~Km~~ 255 (255)
T cd00314 250 WIKMVN 255 (255)
T ss_pred HHHHcC
Confidence 999974
No 9
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=4.3e-52 Score=381.03 Aligned_cols=220 Identities=36% Similarity=0.595 Sum_probs=195.2
Q ss_pred hHHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHhhhcccCCchHHH
Q 026971 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (230)
Q Consensus 8 ~e~~v~~~v~~~~~~i~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~ 77 (230)
+++.=.-.++++|++|+++++++ .++|.+|||+||+++|||.++++||++ |+|+|.+|.+++.|.||..+
T Consensus 36 ~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a 115 (409)
T cd00649 36 AEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKA 115 (409)
T ss_pred HHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHH
Confidence 44444455788999999999864 799999999999999999999999998 69999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCC------------------------------
Q 026971 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------ 126 (230)
Q Consensus 78 ~~~i~~ik~~~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~------------------------------ 126 (230)
..+|++||++|| .||+||+|+||+.+||+.+|||.++|.+||.|.+.+.
T Consensus 116 ~~~L~pik~k~~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~ 195 (409)
T cd00649 116 RRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAV 195 (409)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhh
Confidence 999999999998 7999999999999999999999999999999997542
Q ss_pred --------CCC--CCCCCCCCHHHHHHHHHHhcCCChhhhHHh-hcccccccccccc-----------------------
Q 026971 127 --------QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER----------------------- 172 (230)
Q Consensus 127 --------~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL-~GaHtiG~~~~~~----------------------- 172 (230)
|++ .||.|..++.+|++.| .+|||+.+||||| +||||||++||..
T Consensus 196 ~mgliyv~Pegp~gLPdP~~sa~~LR~~F-~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~~ 274 (409)
T cd00649 196 QMGLIYVNPEGPDGNPDPLAAAKDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWKN 274 (409)
T ss_pred hccccccCCCCCCCCCCCccCHHHHHHHH-HHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhcccc
Confidence 234 6999999999999999 9999999999999 5999999999941
Q ss_pred --------------------------------hhhcc--------------------------------cCCCccccccc
Q 026971 173 --------------------------------ELLTG--------------------------------EKDGLLQLPSD 188 (230)
Q Consensus 173 --------------------------------~ll~~--------------------------------~~~gl~~l~sD 188 (230)
+|+.. ...++++|+||
T Consensus 275 ~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD 354 (409)
T cd00649 275 SYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTD 354 (409)
T ss_pred cCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchhh
Confidence 22220 01266778999
Q ss_pred hhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHH--HhCCCC
Q 026971 189 KALLDDPVFRPLVEKYAADEDAFFADYAEAHLKL--SELGFA 228 (230)
Q Consensus 189 ~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km--~~igv~ 228 (230)
++|+.|++|+++|++||.|+++|+++|+.||+|| +.+|+.
T Consensus 355 ~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~ 396 (409)
T cd00649 355 LALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPK 396 (409)
T ss_pred HhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCch
Confidence 9999999999999999999999999999999999 577765
No 10
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=3e-53 Score=367.70 Aligned_cols=179 Identities=42% Similarity=0.703 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCccccC-hHhhhcccCCchHHHHHHHHHHHHh---
Q 026971 12 YKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRL-AAEQAHSANNGLDIAVRLLEPFKEQ--- 87 (230)
Q Consensus 12 v~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~-~~E~~~~~N~gl~~~~~~i~~ik~~--- 87 (230)
|+++|+++ +.++++++|++|||+||||++| |||||||++ .+|+++++|.||++++++|++||++
T Consensus 1 Vr~~v~~~------~~~~~~~~~~~lRl~FHDc~~~------~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~ 68 (230)
T PF00141_consen 1 VRSDVRAA------FKKDPTLAPGLLRLAFHDCFVY------GGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEA 68 (230)
T ss_dssp HHHHHHHH------HHHHTTSHHHHHHHHHHHHTTH------TSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHH------HHHCcCccHHHHHHHccccccc------cccccceeccccccccccccCcceeeechhhHHhhhcc
Confidence 45566554 6678999999999999999987 999999965 7899999999998899999999976
Q ss_pred -CC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHhcCCChhhhHHhhccc
Q 026971 88 -FP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGH 163 (230)
Q Consensus 88 -~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~GaH 163 (230)
|| +|||||||++||++||+.+|||.|+|++||+|+.++++.+ +||.|+.+++++++.| +++||+++|||||+|||
T Consensus 69 ~cp~~VS~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F-~~~Gls~~e~VaLsGaH 147 (230)
T PF00141_consen 69 ACPGVVSCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGASNLPSPTDSVDQLLAFF-ARKGLSAEEMVALSGAH 147 (230)
T ss_dssp HSTTTS-HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHHHHSSTTTSHHHHHHHHH-HHTT--HHHHHHHHGGG
T ss_pred cccCCCCHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccchhhhhh-hccccchhhhcceeccc
Confidence 88 7999999999999999999999999999999999997643 5999999999999999 99999999999999999
Q ss_pred ccccccccc-------------------------------------------hhhcccCCCccccccchhcccCCCcHHH
Q 026971 164 TLGRCHKER-------------------------------------------ELLTGEKDGLLQLPSDKALLDDPVFRPL 200 (230)
Q Consensus 164 tiG~~~~~~-------------------------------------------~ll~~~~~gl~~l~sD~~L~~d~~t~~~ 200 (230)
|||++||.. ++++ ++|+ |+||++|+.|++|+++
T Consensus 148 TiG~~~c~~f~rl~~~~dp~~d~~~~~~~C~~~~~~~~~~dtp~~fDN~Yy~~ll~--~~gl--l~SD~~L~~d~~t~~~ 223 (230)
T PF00141_consen 148 TIGRAHCSSFSRLYFPPDPTMDPGYAGQNCNSGGDNGVPLDTPTVFDNSYYKNLLN--GRGL--LPSDQALLNDPETRPI 223 (230)
T ss_dssp GSTEESGGCTGGTSCSSGTTSTHHHHHHSSSTSGCTCEESSSTTS-SSHHHHHHHH--TEEE--EHHHHHHHHSTTHHHH
T ss_pred ccccceeccccccccccccccccccceeccCCCccccccccCCCcchhHHHHHHhc--CCCc--CHHHHHHhcCHHHHHH
Confidence 999999961 2232 3444 5999999999999999
Q ss_pred HHHHhhC
Q 026971 201 VEKYAAD 207 (230)
Q Consensus 201 v~~~A~~ 207 (230)
|++||+|
T Consensus 224 V~~yA~d 230 (230)
T PF00141_consen 224 VERYAQD 230 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999986
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.9e-49 Score=381.67 Aligned_cols=211 Identities=36% Similarity=0.602 Sum_probs=187.7
Q ss_pred HHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHhhhcccCCchHHHHHHHHH
Q 026971 14 KAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEP 83 (230)
Q Consensus 14 ~~v~~~~~~i~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~~~~i~~ 83 (230)
=.++.+|++|+++++++ .++|.+|||+||+++||+.++++||++ |+|+|.+|++||.|.+|++++.+|++
T Consensus 52 ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ldka~~lL~p 131 (716)
T TIGR00198 52 LDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLDKARRLLWP 131 (716)
T ss_pred ccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHHHHHHHHHH
Confidence 34555899999999874 799999999999999999999999996 69999999999999999999999999
Q ss_pred HHHhCC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCC------------------------------------
Q 026971 84 FKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPP------------------------------------ 126 (230)
Q Consensus 84 ik~~~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~------------------------------------ 126 (230)
||++|| .|||||||+||+++||+.+|||.|+|.+||+|++.+.
T Consensus 132 Ik~kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~~Gliyv 211 (716)
T TIGR00198 132 IKKKYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATEMGLIYV 211 (716)
T ss_pred HHHHCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhhhcccccc
Confidence 999999 8999999999999999999999999999999995431
Q ss_pred -CCC--CCCCCCCCHHHHHHHHHHhcCCChhhhHHhh-cccccccccccc------------------------------
Q 026971 127 -QEG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------------ 172 (230)
Q Consensus 127 -~~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHtiG~~~~~~------------------------------ 172 (230)
+++ .+|.|..++.+|++.| .++|||.+|||||+ ||||||++||..
T Consensus 212 npeg~~~lPdP~~sa~~Lrd~F-~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c~~~~g~g 290 (716)
T TIGR00198 212 NPEGPDGHPDPLCTAQDIRTTF-ARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHNQYGKGVG 290 (716)
T ss_pred CcccccCCCCCCCCHHHHHHHH-HHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcccCCCCCCCC
Confidence 122 6999999999999999 99999999999995 999999999941
Q ss_pred -------------------------hhhcc------------------------------cCCCccccccchhcccCCCc
Q 026971 173 -------------------------ELLTG------------------------------EKDGLLQLPSDKALLDDPVF 197 (230)
Q Consensus 173 -------------------------~ll~~------------------------------~~~gl~~l~sD~~L~~d~~t 197 (230)
+|+.+ ......+|+||++|..|++|
T Consensus 291 ~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDlaL~~Dp~~ 370 (716)
T TIGR00198 291 RDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADLALRFDPEF 370 (716)
T ss_pred CCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhHHhccCccH
Confidence 33321 00125667999999999999
Q ss_pred HHHHHHHhhChHHHHHHHHHHHHHHHhC
Q 026971 198 RPLVEKYAADEDAFFADYAEAHLKLSEL 225 (230)
Q Consensus 198 ~~~v~~~A~~~~~F~~~F~~Am~Km~~i 225 (230)
+++|+.||.|+++|+++|+.||+||+..
T Consensus 371 r~iVe~yA~d~~~F~~dFA~Aw~KL~~~ 398 (716)
T TIGR00198 371 RKISRRFLREPDYFAEAFAKAWFKLTHR 398 (716)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999953
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.5e-46 Score=362.11 Aligned_cols=216 Identities=36% Similarity=0.586 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHhhhcccCCchHHH
Q 026971 8 VSEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIA 77 (230)
Q Consensus 8 ~e~~v~~~v~~~~~~i~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~ 77 (230)
+++.=.-.++.+|++|+++++++ .++|.+|||+||+++|||.++++||++ |+|+|.+|.+|+.|.||.++
T Consensus 48 ~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka 127 (726)
T PRK15061 48 AEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKA 127 (726)
T ss_pred HHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHH
Confidence 34444455677899999999875 799999999999999999999999997 69999999999999999999
Q ss_pred HHHHHHHHHhCC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCC-----------------------------
Q 026971 78 VRLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------- 127 (230)
Q Consensus 78 ~~~i~~ik~~~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~----------------------------- 127 (230)
..+|++||++|| .||+||+|+||+.+||+.+|||.++|.+||.|.+.+..
T Consensus 128 ~~~L~pik~ky~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a 207 (726)
T PRK15061 128 RRLLWPIKQKYGNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAA 207 (726)
T ss_pred HHHHHHHHHHhCCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhh
Confidence 999999999998 79999999999999999999999999999999875421
Q ss_pred ----------CC--CCCCCCCCHHHHHHHHHHhcCCChhhhHHhh-cccccccccccc----------------------
Q 026971 128 ----------EG--RLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER---------------------- 172 (230)
Q Consensus 128 ----------~~--~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHtiG~~~~~~---------------------- 172 (230)
++ -+|.|..++.+|++.| .+|||+.+|||||+ ||||||++||..
T Consensus 208 ~~mgliyvnpegp~glPdP~~sa~~lR~tF-~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLgw~ 286 (726)
T PRK15061 208 VQMGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLGWK 286 (726)
T ss_pred hhccceecCCCCCCCCCCcccCHHHHHHHH-HHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhcccc
Confidence 11 1799999999999999 99999999999995 999999999941
Q ss_pred ---------------------------------hhhcc--------------------------------cCCCcccccc
Q 026971 173 ---------------------------------ELLTG--------------------------------EKDGLLQLPS 187 (230)
Q Consensus 173 ---------------------------------~ll~~--------------------------------~~~gl~~l~s 187 (230)
+|+.. .+..+++|+|
T Consensus 287 ~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtS 366 (726)
T PRK15061 287 NSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTT 366 (726)
T ss_pred ccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccccc
Confidence 22211 0114677899
Q ss_pred chhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHh
Q 026971 188 DKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 224 (230)
Q Consensus 188 D~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~ 224 (230)
|++|..||+|+++|++||.|+++|+++|+.||+||+.
T Consensus 367 D~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~h 403 (726)
T PRK15061 367 DLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTH 403 (726)
T ss_pred cHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999954
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.1e-44 Score=316.79 Aligned_cols=189 Identities=29% Similarity=0.456 Sum_probs=159.1
Q ss_pred hcCCchHHHHHHHhhhcCccccCCCCCCCCccccChHhhhcccCCchH--HHHHHHHHHHHhCCCCcHHHHHhhhhcccc
Q 026971 28 AEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLD--IAVRLLEPFKEQFPTISYADLYQLAGVVGV 105 (230)
Q Consensus 28 ~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgsi~~~~E~~~~~N~gl~--~~~~~i~~ik~~~~~VS~ADiialaa~~av 105 (230)
.++.+++.+|||+||||++||...+.|||||||++ |..+++|.|+. ..++.++.|+ .++|||||||||||++||
T Consensus 37 ~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIll--e~~~~En~G~~~n~~l~~~~~i~--~~~VScADiialAa~~AV 112 (264)
T cd08201 37 PGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQY--ELDRPENIGSGFNTTLNFFVNFY--SPRSSMADLIAMGVVTSV 112 (264)
T ss_pred CCccHHHHHHHHHHHhhcCcccCCCCCCCCcceee--cCCChhhccCchhhccccceeec--cCccCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998 57788888875 2344444443 248999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhcCCChhhhHHhhc-ccccccccccc------------
Q 026971 106 EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSG-GHTLGRCHKER------------ 172 (230)
Q Consensus 106 ~~~GgP~~~v~~GR~D~~~s~~~~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~G-aHtiG~~~~~~------------ 172 (230)
+.+|||.|+|++||+|++++.+.+ ||.|+.++++|++.| +++||+++|||+|+| |||||++||.+
T Consensus 113 ~~~GGP~i~v~~GR~Da~~s~~~g-lP~P~~~v~~l~~~F-a~~Gfs~~DmVaLsggaHTiG~ahc~~f~~~~~~g~~~~ 190 (264)
T cd08201 113 ASCGGPVVPFRAGRIDATEAGQAG-VPEPQTDLGTTTESF-RRQGFSTSEMIALVACGHTLGGVHSEDFPEIVPPGSVPD 190 (264)
T ss_pred HHcCCCeecccccCCCcccccccc-CCCCccCHHHHHHHH-HHcCCChHHHheeecCCeeeeecccccchhhcCCccccC
Confidence 999999999999999999998886 999999999999999 999999999999995 99999999963
Q ss_pred ------------------hhhcccCCCcccc------ccchhcccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHh
Q 026971 173 ------------------ELLTGEKDGLLQL------PSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSE 224 (230)
Q Consensus 173 ------------------~ll~~~~~gl~~l------~sD~~L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~ 224 (230)
++|+|...++|++ .||..+|....- ..++..| +++.|.+.-+..+.||.+
T Consensus 191 ~~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 191 TVLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred CCCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhheecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 4455566677654 567777664333 2345566 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=5.8e-43 Score=309.49 Aligned_cols=200 Identities=29% Similarity=0.444 Sum_probs=173.6
Q ss_pred HhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHhhhcccCCc--hHHHHHHHHHHHHhCC-------CCcHHH
Q 026971 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANNG--LDIAVRLLEPFKEQFP-------TISYAD 95 (230)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~g--l~~~~~~i~~ik~~~~-------~VS~AD 95 (230)
++..+.+++.+|||+||+++|||.++++||+||+ |+|.+|++|+.|.+ |..++.++++||+++| .||+||
T Consensus 23 i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~~~~~~~~vS~AD 102 (297)
T cd08200 23 ILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNESQSGGKKVSLAD 102 (297)
T ss_pred HHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcccccCCccccHHH
Confidence 5566789999999999999999999999999995 99999999999999 9999999999999997 799999
Q ss_pred HHhhhhcccccccCC-----CCCCCCCCCCCCCCCCC-----CCCCCCCC------------CCHHHHHHHHHHhcCCCh
Q 026971 96 LYQLAGVVGVEVTGG-----PDIPFHPGRDDKAEPPQ-----EGRLPDAK------------QGNDHLRQVFGAQMGLSD 153 (230)
Q Consensus 96 iialaa~~av~~~Gg-----P~~~v~~GR~D~~~s~~-----~~~lP~~~------------~~~~~l~~~F~~~~Gl~~ 153 (230)
+|+||+..||+.+|| |.++|.+||.|.+.+.. ..++|.+. ...+.|++.| .++|||+
T Consensus 103 LivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~Lrd~f-~rlglsd 181 (297)
T cd08200 103 LIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEMLVDKA-QLLTLTA 181 (297)
T ss_pred HHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHHHHHH-HhCCCCh
Confidence 999999999999999 99999999999987632 13455332 2346799999 9999999
Q ss_pred hhhHHhhccc-ccccccccc------------------hhhcc------------------cCCCcc---ccccchhccc
Q 026971 154 KDIVALSGGH-TLGRCHKER------------------ELLTG------------------EKDGLL---QLPSDKALLD 193 (230)
Q Consensus 154 ~elVaL~GaH-tiG~~~~~~------------------~ll~~------------------~~~gl~---~l~sD~~L~~ 193 (230)
+|||||+||| ++|..|..+ +||+. ...|.+ ++++|..|.+
T Consensus 182 ~EmvaL~Gg~r~lG~~~~~s~~G~wT~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~s 261 (297)
T cd08200 182 PEMTVLVGGLRVLGANYGGSKHGVFTDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGS 261 (297)
T ss_pred HHHhheecchhhcccCCCCCCCCCCcCCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhcc
Confidence 9999999997 799988642 66641 012332 3688999999
Q ss_pred CCCcHHHHHHHhhC--hHHHHHHHHHHHHHHHhCC
Q 026971 194 DPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 226 (230)
Q Consensus 194 d~~t~~~v~~~A~~--~~~F~~~F~~Am~Km~~ig 226 (230)
|+++|++|+.||+| +++|++||+.||.||+++.
T Consensus 262 d~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 262 NSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred CHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 99999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2e-38 Score=307.28 Aligned_cols=210 Identities=27% Similarity=0.441 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHhhhcccC--CchHHHHHHHHHHHHhCC
Q 026971 13 KKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSAN--NGLDIAVRLLEPFKEQFP 89 (230)
Q Consensus 13 ~~~v~~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N--~gl~~~~~~i~~ik~~~~ 89 (230)
++.|...|. +++..+-.++.+||++||++.|||.++++||+||. |+|.+|++|+.| .+|..++.+|++||+++|
T Consensus 431 ~~di~~lk~---~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f~ 507 (716)
T TIGR00198 431 EGDIKELKQ---QILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEFA 507 (716)
T ss_pred HHHHHHHHH---HHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 445544332 35677788999999999999999999999999995 999999999999 899999999999999999
Q ss_pred --CCcHHHHHhhhhccccccc---CCC--CCCCCCCCCCCCCCC--CCCCCC---CC------------CCCHHHHHHHH
Q 026971 90 --TISYADLYQLAGVVGVEVT---GGP--DIPFHPGRDDKAEPP--QEGRLP---DA------------KQGNDHLRQVF 145 (230)
Q Consensus 90 --~VS~ADiialaa~~av~~~---GgP--~~~v~~GR~D~~~s~--~~~~lP---~~------------~~~~~~l~~~F 145 (230)
.||.||+|+||+.+||+.+ ||| .+||.+||.|.+.+. +++..| .+ ......|++.|
T Consensus 508 ~~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~d~a 587 (716)
T TIGR00198 508 KGPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTDAESFTPLEPIADGFRNYLKRDYAVTPEELLLDKA 587 (716)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCCccccccCCCCCcccchhccccccCCHHHHHHHHH
Confidence 8999999999999999998 897 689999999998763 222222 11 12345689999
Q ss_pred HHhcCCChhhhHHhhccc-ccccccccc------------------hhhcc------------------cCCCcccc---
Q 026971 146 GAQMGLSDKDIVALSGGH-TLGRCHKER------------------ELLTG------------------EKDGLLQL--- 185 (230)
Q Consensus 146 ~~~~Gl~~~elVaL~GaH-tiG~~~~~~------------------~ll~~------------------~~~gl~~l--- 185 (230)
.++|||++|||||+||| ++|++|..+ +||+. ...|.+++
T Consensus 588 -~~lglt~~EmvaL~Gg~r~lG~~~~~s~~G~~T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t 666 (716)
T TIGR00198 588 -QLLTLTAPEMTVLIGGMRVLGANHGGSKHGVFTDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTAT 666 (716)
T ss_pred -HhCCCChHHHHheecchhhccccCCCCCCCCCcCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccC
Confidence 99999999999999995 999999743 56641 12244444
Q ss_pred ccchhcccCCCcHHHHHHHhhCh--HHHHHHHHHHHHHHHhCC
Q 026971 186 PSDKALLDDPVFRPLVEKYAADE--DAFFADYAEAHLKLSELG 226 (230)
Q Consensus 186 ~sD~~L~~d~~t~~~v~~~A~~~--~~F~~~F~~Am~Km~~ig 226 (230)
++|..|.+|+++|.+|+.||+|+ ++|++||+.||.|++++|
T Consensus 667 ~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 667 RVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred hhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 78999999999999999999997 899999999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=9.4e-38 Score=301.35 Aligned_cols=200 Identities=29% Similarity=0.452 Sum_probs=173.0
Q ss_pred HhhcCCchHHHHHHHhhhcCccccCCCCCCCCcc-ccChHhhhcccCC--chHHHHHHHHHHHHhC-------CCCcHHH
Q 026971 26 FIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGT-MRLAAEQAHSANN--GLDIAVRLLEPFKEQF-------PTISYAD 95 (230)
Q Consensus 26 ~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dgs-i~~~~E~~~~~N~--gl~~~~~~i~~ik~~~-------~~VS~AD 95 (230)
++..+-..+.+||++||++.|||.++++||+||. |+|.+|++|+.|. +|..++.+|++||+++ |.||.||
T Consensus 448 i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~vS~AD 527 (726)
T PRK15061 448 ILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKKVSLAD 527 (726)
T ss_pred HHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCceeHHH
Confidence 5666778999999999999999999999999995 9999999999999 9999999999999997 6799999
Q ss_pred HHhhhhccccccc---CC--CCCCCCCCCCCCCCCCC-----CCCCCCCC------------CCHHHHHHHHHHhcCCCh
Q 026971 96 LYQLAGVVGVEVT---GG--PDIPFHPGRDDKAEPPQ-----EGRLPDAK------------QGNDHLRQVFGAQMGLSD 153 (230)
Q Consensus 96 iialaa~~av~~~---Gg--P~~~v~~GR~D~~~s~~-----~~~lP~~~------------~~~~~l~~~F~~~~Gl~~ 153 (230)
+|+||+.+||+.+ || |.+||.+||.|.+.... ..++|... .....|++.| .++|||+
T Consensus 528 LivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a-~~lglt~ 606 (726)
T PRK15061 528 LIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKA-QLLTLTA 606 (726)
T ss_pred HHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHHHHHH-HhCCCCh
Confidence 9999999999998 57 99999999999987632 23567543 1236799999 9999999
Q ss_pred hhhHHhhccc-ccccccccc------------------hhhcc------------------cCCCccc---cccchhccc
Q 026971 154 KDIVALSGGH-TLGRCHKER------------------ELLTG------------------EKDGLLQ---LPSDKALLD 193 (230)
Q Consensus 154 ~elVaL~GaH-tiG~~~~~~------------------~ll~~------------------~~~gl~~---l~sD~~L~~ 193 (230)
+|||||+||| ++|..|..+ +||+. ...|.++ +++|..|.+
T Consensus 607 ~EmvaL~Gg~r~Lg~~~~~S~~G~~T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgs 686 (726)
T PRK15061 607 PEMTVLVGGLRVLGANYGGSKHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGS 686 (726)
T ss_pred HHHhheecchhhcccCCCCCCCCCCcCCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheeccc
Confidence 9999999997 899888642 66641 0123333 478999999
Q ss_pred CCCcHHHHHHHhhC--hHHHHHHHHHHHHHHHhCC
Q 026971 194 DPVFRPLVEKYAAD--EDAFFADYAEAHLKLSELG 226 (230)
Q Consensus 194 d~~t~~~v~~~A~~--~~~F~~~F~~Am~Km~~ig 226 (230)
|+++|.+|+.||+| +++|++||+.||.|+++++
T Consensus 687 ds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 687 NSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred CHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 99999999999999 9999999999999999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-34 Score=266.05 Aligned_cols=218 Identities=37% Similarity=0.608 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHhhHhhcC---------CchHHHHHHHhhhcCccccCCCCCCCC-ccccChHhhhcccCCchHHHH
Q 026971 9 SEDYKKAVEKCKRKLRGFIAEK---------NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAV 78 (230)
Q Consensus 9 e~~v~~~v~~~~~~i~~~~~~~---------~~a~~~lRl~FHDc~~~d~~~~~gG~d-gsi~~~~E~~~~~N~gl~~~~ 78 (230)
|+.=.-.+...|++|++++.+. .++|.+|||+||-+++|+..++.||.. |..+|.++.+||.|.+|+++.
T Consensus 62 eefk~lD~~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKar 141 (730)
T COG0376 62 EEFKSLDLAAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKAR 141 (730)
T ss_pred HHhhhccHHHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHH
Confidence 3333344556889999999874 589999999999999999999999987 599999999999999999999
Q ss_pred HHHHHHHHhCC-CCcHHHHHhhhhcccccccCCCCCCCCCCCCCCCCCCC------------------------------
Q 026971 79 RLLEPFKEQFP-TISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------------------ 127 (230)
Q Consensus 79 ~~i~~ik~~~~-~VS~ADiialaa~~av~~~GgP~~~v~~GR~D~~~s~~------------------------------ 127 (230)
++|++||++|+ .||+||+|+|++.+|++.+|++++.|..||.|-+.+..
T Consensus 142 RLLWPIKkKYG~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 142 RLLWPIKKKYGRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred HHhhhHhHhhcccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 99999999999 89999999999999999999999999999999888732
Q ss_pred --------C--CCCCCCCCCHHHHHHHHHHhcCCChhhhHHhh-cccccccccccc------------------------
Q 026971 128 --------E--GRLPDAKQGNDHLRQVFGAQMGLSDKDIVALS-GGHTLGRCHKER------------------------ 172 (230)
Q Consensus 128 --------~--~~lP~~~~~~~~l~~~F~~~~Gl~~~elVaL~-GaHtiG~~~~~~------------------------ 172 (230)
+ +..|.|..+..+++..| ++|+++.+|.|||+ ||||+|++|...
T Consensus 222 MGLIYVNPEGpng~PDpl~aA~dIRetF-aRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~ 300 (730)
T COG0376 222 MGLIYVNPEGPNGNPDPLAAARDIRETF-ARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANT 300 (730)
T ss_pred eeeEEeCCCCCCCCCChhhhHHHHHHHH-HHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccc
Confidence 1 23788888899999999 99999999999996 599999999742
Q ss_pred -------------------------------hhhc----------c---------------------cCCCccccccchh
Q 026971 173 -------------------------------ELLT----------G---------------------EKDGLLQLPSDKA 190 (230)
Q Consensus 173 -------------------------------~ll~----------~---------------------~~~gl~~l~sD~~ 190 (230)
+|+. | .+..++||++|.+
T Consensus 301 ~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDla 380 (730)
T COG0376 301 YGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLA 380 (730)
T ss_pred cCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchh
Confidence 1110 0 1226778999999
Q ss_pred cccCCCcHHHHHHHhhChHHHHHHHHHHHHHHHhCCC
Q 026971 191 LLDDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGF 227 (230)
Q Consensus 191 L~~d~~t~~~v~~~A~~~~~F~~~F~~Am~Km~~igv 227 (230)
|..||+++++.++|..|++.|.+.|+.||.||..-+.
T Consensus 381 Lr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 381 LRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred hhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999986544
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.72 E-value=1.8e-17 Score=155.30 Aligned_cols=201 Identities=28% Similarity=0.436 Sum_probs=158.0
Q ss_pred hHhhcCCchHHHHHHHhhhcCccccCCCCCCCCc-cccChHhhhcccCC--chHHHHHHHHHHHHhCC-CCcHHHHHhhh
Q 026971 25 GFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANN--GLDIAVRLLEPFKEQFP-TISYADLYQLA 100 (230)
Q Consensus 25 ~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dg-si~~~~E~~~~~N~--gl~~~~~~i~~ik~~~~-~VS~ADiiala 100 (230)
+|+..+-....+|-.+|-.+.+|..|++.||+|| .|++.+.++|+.|. .|.+.+.+++.|.+.+. .||.||+|+|+
T Consensus 457 ~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkkvSlADlIVL~ 536 (730)
T COG0376 457 KILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKKVSLADLIVLG 536 (730)
T ss_pred HHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCccchhHheeec
Confidence 4677777889999999999999999999999998 99999999999995 57788999999999987 79999999999
Q ss_pred hccccccc---CC--CCCCCCCCCCCCCCCCC-----CCCCC------------CCCCCHHHHHHHHHHhcCCChhhhHH
Q 026971 101 GVVGVEVT---GG--PDIPFHPGRDDKAEPPQ-----EGRLP------------DAKQGNDHLRQVFGAQMGLSDKDIVA 158 (230)
Q Consensus 101 a~~av~~~---Gg--P~~~v~~GR~D~~~s~~-----~~~lP------------~~~~~~~~l~~~F~~~~Gl~~~elVa 158 (230)
+..+|+.+ +| -.+||.+||.|.++... ...-| .......-|+++- +..+|+..||++
T Consensus 537 G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkA-qlL~LtapemtV 615 (730)
T COG0376 537 GNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKA-QLLTLTAPEMTV 615 (730)
T ss_pred chHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHH-HHhccCCccceE
Confidence 99999864 44 46789999999987521 11111 1112234488888 999999999999
Q ss_pred hhccc-ccccccccc------------------hhhcc------------------cCCCccc---cccchhcccCCCcH
Q 026971 159 LSGGH-TLGRCHKER------------------ELLTG------------------EKDGLLQ---LPSDKALLDDPVFR 198 (230)
Q Consensus 159 L~GaH-tiG~~~~~~------------------~ll~~------------------~~~gl~~---l~sD~~L~~d~~t~ 198 (230)
|+||- .+|..+... |||+. .+.|.+. ...|..+-++++.|
T Consensus 616 LiGGlRvLg~n~g~s~~GVfT~~pg~LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LR 695 (730)
T COG0376 616 LIGGLRVLGANYGGSKHGVFTDRPGVLTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELR 695 (730)
T ss_pred EEcceEeeccCCCCCccceeccCcccccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHH
Confidence 99875 455443311 55531 1224332 24688888999999
Q ss_pred HHHHHHhhC--hHHHHHHHHHHHHHHHhCC
Q 026971 199 PLVEKYAAD--EDAFFADYAEAHLKLSELG 226 (230)
Q Consensus 199 ~~v~~~A~~--~~~F~~~F~~Am~Km~~ig 226 (230)
.+.+.||++ +++|.+||+.||.|..++.
T Consensus 696 A~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 696 ALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 999999985 8889999999999998764
No 19
>PF08383 Maf_N: Maf N-terminal region; InterPro: IPR013592 This region is found in various leucine zipper transcription factors of the Maf family. These are implicated in the regulation of insulin gene expression [], in erythroid differentiation [], and in differentiation of the neuroretina [].
Probab=32.19 E-value=28 Score=21.50 Aligned_cols=15 Identities=47% Similarity=0.749 Sum_probs=12.2
Q ss_pred HhcCCChhhhH-Hhhc
Q 026971 147 AQMGLSDKDIV-ALSG 161 (230)
Q Consensus 147 ~~~Gl~~~elV-aL~G 161 (230)
...|||++|.| ||+|
T Consensus 19 e~l~LtpEDAvEaLi~ 34 (35)
T PF08383_consen 19 EALGLTPEDAVEALIG 34 (35)
T ss_pred hhcCCCHHHHHHHHhc
Confidence 56789999999 6776
No 20
>PRK05264 transcriptional repressor protein MetJ; Provisional
Probab=29.91 E-value=42 Score=25.31 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.2
Q ss_pred hcccCCCcHHHHHH--HhhChHHHHHHHHHHHH
Q 026971 190 ALLDDPVFRPLVEK--YAADEDAFFADYAEAHL 220 (230)
Q Consensus 190 ~L~~d~~t~~~v~~--~A~~~~~F~~~F~~Am~ 220 (230)
.+++|.+||..|+. .|+|.++.-+.|-.||.
T Consensus 35 kiLTdERTRRQvnNLRHATNSELLCEAFLHA~T 67 (105)
T PRK05264 35 KILTDERTRRQVNNLRHATNSELLCEAFLHAFT 67 (105)
T ss_pred HHHhhHHHHHHHhhhhhcccHHHHHHHHHHHHc
Confidence 56789999999976 48899999999988874
No 21
>cd00490 Met_repressor_MetJ Met Repressor, MetJ. MetJ is a bacterial regulatory protein that uses S-adenosylmethionine (SAM) as a corepressor to regulate the production of Methionine. MetJ binds arrays of two to five adjacent copies of an eight base-pair 'metbox' sequence. MetJ forms sufficiently strong interactions with the sugar-phosphate backbone to accomodate sequence variation in natural operators. However, it is very sensitive to particular base changes in the operator. MetJ exists as a homodimer.
Probab=29.42 E-value=43 Score=25.08 Aligned_cols=31 Identities=19% Similarity=0.266 Sum_probs=26.0
Q ss_pred hcccCCCcHHHHHH--HhhChHHHHHHHHHHHH
Q 026971 190 ALLDDPVFRPLVEK--YAADEDAFFADYAEAHL 220 (230)
Q Consensus 190 ~L~~d~~t~~~v~~--~A~~~~~F~~~F~~Am~ 220 (230)
.+++|.+||..|+. .|.|.++.-+.|-.||.
T Consensus 34 kiLTdERTRRQvnnlRHATNSELLCEAFLHAfT 66 (103)
T cd00490 34 KILTDERTRRQVNNLRHATNSELLCEAFLHAFT 66 (103)
T ss_pred HHHhhHHHHHHHhhhhhcccHHHHHHHHHHHhc
Confidence 56789999999976 48899999999988874
No 22
>cd07922 CarBa CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBa is the A subunit of 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. 2-aminophenol 1,6-dioxygenase is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, composed of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, the enzyme has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=28.94 E-value=29 Score=25.42 Aligned_cols=36 Identities=28% Similarity=0.556 Sum_probs=23.2
Q ss_pred cccCCCcHHHHHHHhhChHHHHHHHH-----------HHHHHHHhCCCCC
Q 026971 191 LLDDPVFRPLVEKYAADEDAFFADYA-----------EAHLKLSELGFAE 229 (230)
Q Consensus 191 L~~d~~t~~~v~~~A~~~~~F~~~F~-----------~Am~Km~~igv~~ 229 (230)
|.+||..+ +.|..|++.+++.|. .-|.+|..+|+.+
T Consensus 13 L~~dp~~r---erF~~DPea~~~~~gLt~eE~~aL~~~D~~~L~~lGvhp 59 (81)
T cd07922 13 LFKDPGLI---ERFQDDPSAVFEEYGLTPAERAALREGTFGALTSIGVHP 59 (81)
T ss_pred HhcCHHHH---HHHHHCHHHHHHHcCCCHHHHHHHHccCHHHHHHcCCCH
Confidence 55555444 457788888877762 3366777777754
No 23
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=27.49 E-value=48 Score=22.33 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=23.1
Q ss_pred HHhhhhc---ccccccCCCCCCCCCCCCCCCCCC
Q 026971 96 LYQLAGV---VGVEVTGGPDIPFHPGRDDKAEPP 126 (230)
Q Consensus 96 iialaa~---~av~~~GgP~~~v~~GR~D~~~s~ 126 (230)
+++||+. |-+..+.||-++.-.||+-.+.|+
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqptpsD 42 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQPTPSD 42 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccCChhh
Confidence 4566664 445568899999999998776654
No 24
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=23.66 E-value=65 Score=29.45 Aligned_cols=55 Identities=18% Similarity=0.182 Sum_probs=33.3
Q ss_pred cCCCCCCCCCCCCCCCCCCCCC--CCCC----CCCCHHHHHHHHHHhcCCC----------hhhhHHhhccc
Q 026971 108 TGGPDIPFHPGRDDKAEPPQEG--RLPD----AKQGNDHLRQVFGAQMGLS----------DKDIVALSGGH 163 (230)
Q Consensus 108 ~GgP~~~v~~GR~D~~~s~~~~--~lP~----~~~~~~~l~~~F~~~~Gl~----------~~elVaL~GaH 163 (230)
+|-..+..++||-|-+.-...+ ..+. .-..+.++.+.| +..|+. ..|+..|.|+|
T Consensus 168 AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~d~Gv~~v~~i~~~~-~~~~~~T~vmaASfRn~~~v~~laG~d 238 (313)
T cd00957 168 AGVTLISPFVGRILDWYKKHSGDKAYTAEEDPGVASVKKIYNYY-KKFGYKTKVMGASFRNIGQILALAGCD 238 (313)
T ss_pred cCCCEEEeecchHHHhhhhccccccCCccCCcHHHHHHHHHHHH-HHcCCCcEEEecccCCHHHHHHHhCCC
Confidence 3667788999998865322111 1111 112456777888 888864 45666777777
No 25
>PRK12346 transaldolase A; Provisional
Probab=23.43 E-value=63 Score=29.63 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=36.1
Q ss_pred cCCCCCCCCCCCCCCCCCCC--CCCC-CCCC---CCHHHHHHHHHHhcCC----------ChhhhHHhhccccc
Q 026971 108 TGGPDIPFHPGRDDKAEPPQ--EGRL-PDAK---QGNDHLRQVFGAQMGL----------SDKDIVALSGGHTL 165 (230)
Q Consensus 108 ~GgP~~~v~~GR~D~~~s~~--~~~l-P~~~---~~~~~l~~~F~~~~Gl----------~~~elVaL~GaHti 165 (230)
+|-..+..++||-|-+.-.. .... |... ..+.++.+.| +..|+ +..|+.+|.|+|.+
T Consensus 169 AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~~~~~T~Vm~ASfRn~~qi~alaG~d~l 241 (316)
T PRK12346 169 AGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYY-KQHRYETIVMGASFRRTEQILALAGCDRL 241 (316)
T ss_pred cCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHHHHH-HHcCCCcEEEecccCCHHHHHHHhCCCEE
Confidence 57778889999998753221 1111 1122 2456778888 77774 45777888888844
No 26
>PTZ00411 transaldolase-like protein; Provisional
Probab=23.32 E-value=60 Score=30.01 Aligned_cols=57 Identities=18% Similarity=0.181 Sum_probs=35.7
Q ss_pred cCCCCCCCCCCCCCCCCCCCC---CCCCCCCC---CHHHHHHHHHHhcCC----------ChhhhHHhhccccc
Q 026971 108 TGGPDIPFHPGRDDKAEPPQE---GRLPDAKQ---GNDHLRQVFGAQMGL----------SDKDIVALSGGHTL 165 (230)
Q Consensus 108 ~GgP~~~v~~GR~D~~~s~~~---~~lP~~~~---~~~~l~~~F~~~~Gl----------~~~elVaL~GaHti 165 (230)
+|-..+..++||-+-+.-.+. ...+.... .+.++...| +..|+ +..|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~-k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYY-KKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHH-HHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 466778899999866532211 11121222 456677888 77775 45777888898844
No 27
>COG3060 MetJ Transcriptional regulator of met regulon [Transcription / Amino acid transport and metabolism]
Probab=21.75 E-value=83 Score=23.44 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.4
Q ss_pred hhcccCCCcHHHHHH--HhhChHHHHHHHHHHHH
Q 026971 189 KALLDDPVFRPLVEK--YAADEDAFFADYAEAHL 220 (230)
Q Consensus 189 ~~L~~d~~t~~~v~~--~A~~~~~F~~~F~~Am~ 220 (230)
..+++|.+||..|+. .|.|.++.-+.|-.||.
T Consensus 34 l~ilt~ertrrq~~nlrhatnsellceaflhaft 67 (105)
T COG3060 34 LKILTDERTRRQVNNLRHATNSELLCEAFLHAFT 67 (105)
T ss_pred HHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHHHc
Confidence 356789999999876 47898888888877763
No 28
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=20.59 E-value=23 Score=26.30 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=20.2
Q ss_pred HHHHHHhhHhhcCCchHHHHHHHhhhcCccccCCCCCCCCc-cccC
Q 026971 18 KCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFG-TMRL 62 (230)
Q Consensus 18 ~~~~~i~~~~~~~~~a~~~lRl~FHDc~~~d~~~~~gG~dg-si~~ 62 (230)
+|.++|++++++....+..||+.+ ..|||.| +..+
T Consensus 9 ~A~~~i~~ll~~~~~~~~~LRi~v----------~~gGCsG~~Y~~ 44 (92)
T TIGR01911 9 DAYEEFKDFLKENDIDNDVIRIHF----------AGMGCMGPMFNL 44 (92)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEE----------eCCCccCcccce
Confidence 345566666654433334478766 3379998 4433
No 29
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=20.23 E-value=48 Score=26.73 Aligned_cols=42 Identities=21% Similarity=0.270 Sum_probs=30.0
Q ss_pred CCCCCCC----CCHHHHHHHHHHhcCCChhhh-HHhhccccccccccc
Q 026971 129 GRLPDAK----QGNDHLRQVFGAQMGLSDKDI-VALSGGHTLGRCHKE 171 (230)
Q Consensus 129 ~~lP~~~----~~~~~l~~~F~~~~Gl~~~el-VaL~GaHtiG~~~~~ 171 (230)
...|... +++.+-+-+| +.+||++.++ |.|--+|-||.+...
T Consensus 20 r~~PtWlK~~~ddvkeqI~K~-akKGltpsqIGviLRDshGi~q~r~v 66 (151)
T KOG0400|consen 20 RSVPTWLKLTADDVKEQIYKL-AKKGLTPSQIGVILRDSHGIGQVRFV 66 (151)
T ss_pred cCCcHHHhcCHHHHHHHHHHH-HHcCCChhHceeeeecccCcchhhee
Confidence 3455543 2344455678 9999999998 556789999998754
Done!