Your job contains 1 sequence.
>026974
MIREMIITNTNHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGN
GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK
TKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSA
TIPTDMDTVDSPFTLDPFAGNLGWFDYEDLLYLLQQNYISAAEWLLLHTY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026974
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 515 2.0e-49 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 460 1.3e-43 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 425 6.8e-40 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 242 1.7e-20 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 234 1.2e-19 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 225 1.1e-18 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 223 1.7e-18 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 216 9.5e-18 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 215 1.2e-17 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 211 3.2e-17 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 206 1.1e-16 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 202 2.9e-16 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 198 1.0e-15 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 196 1.3e-15 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 194 2.0e-15 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 190 5.4e-15 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 180 6.2e-14 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 180 7.5e-14 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 178 1.1e-13 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 180 1.3e-13 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 173 4.1e-13 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 172 6.3e-13 1
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 172 1.3e-12 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 166 1.9e-12 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 168 6.3e-12 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 160 2.1e-10 1
WB|WBGene00000439 - symbol:ceh-16 species:6239 "Caenorhab... 134 3.4e-08 1
ZFIN|ZDB-GENE-980526-216 - symbol:eng1a "engrailed 1a" sp... 132 6.0e-07 1
UNIPROTKB|H9L1U3 - symbol:H9L1U3 "Uncharacterized protein... 117 6.3e-07 1
UNIPROTKB|A8MWF9 - symbol:MEOX1 "Homeobox protein MOX-1" ... 117 6.3e-07 1
WB|WBGene00000432 - symbol:ceh-7 species:6239 "Caenorhabd... 116 8.1e-07 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 131 3.3e-06 1
WB|WBGene00000430 - symbol:ceh-5 species:6239 "Caenorhabd... 110 3.9e-06 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 129 5.0e-06 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 129 5.6e-06 1
ZFIN|ZDB-GENE-980526-40 - symbol:eng2b "engrailed 2b" spe... 125 6.9e-06 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 128 7.3e-06 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 128 7.3e-06 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 128 7.5e-06 1
UNIPROTKB|F6USR4 - symbol:MEOX2 "Uncharacterized protein"... 111 9.1e-06 1
UNIPROTKB|Q90Z54 - symbol:CDXB "Uncharacterized protein" ... 124 9.2e-06 1
ZFIN|ZDB-GENE-990708-7 - symbol:otpb "orthopedia homolog ... 125 1.1e-05 1
UNIPROTKB|F1NHM4 - symbol:CDX4 "Uncharacterized protein" ... 105 1.4e-05 1
UNIPROTKB|F1MCF6 - symbol:CDX1 "Uncharacterized protein" ... 105 1.4e-05 1
UNIPROTKB|F1MJX0 - symbol:CDX2 "Uncharacterized protein" ... 105 1.4e-05 1
RGD|621233 - symbol:Cdx1 "caudal type homeo box 1" specie... 105 1.4e-05 1
UNIPROTKB|Q05095 - symbol:Cdx1 "Homeobox protein CDX-1" s... 105 1.4e-05 1
UNIPROTKB|G3V2N9 - symbol:NOBOX "Homeobox protein NOBOX" ... 114 1.5e-05 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 121 1.6e-05 1
UNIPROTKB|E1B707 - symbol:LBX2 "Uncharacterized protein" ... 118 1.7e-05 1
RGD|1561172 - symbol:Lbx2 "ladybird homeobox 2" species:1... 118 1.7e-05 1
UNIPROTKB|F6R243 - symbol:CDX1 "Homeobox protein CDX-1" s... 104 1.9e-05 1
MGI|MGI:103220 - symbol:Meox1 "mesenchyme homeobox 1" spe... 121 1.9e-05 1
UNIPROTKB|Q05917 - symbol:EN2 "Homeobox protein engrailed... 121 2.7e-05 1
UNIPROTKB|J9P1P5 - symbol:LBX2 "Uncharacterized protein" ... 116 2.8e-05 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 123 2.9e-05 1
UNIPROTKB|F1NF72 - symbol:F1NF72 "Uncharacterized protein... 102 3.1e-05 1
UNIPROTKB|I3LF97 - symbol:I3LF97 "Uncharacterized protein... 102 3.1e-05 1
UNIPROTKB|F1MXQ1 - symbol:F1MXQ1 "Uncharacterized protein... 115 3.2e-05 1
RGD|1308911 - symbol:Meox1 "mesenchyme homeobox 1" specie... 119 3.4e-05 1
UNIPROTKB|F1P4T4 - symbol:HOXD13 "Homeobox protein Hox-D1... 101 4.1e-05 1
UNIPROTKB|F1SNT2 - symbol:LBX2 "Uncharacterized protein" ... 115 4.3e-05 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 116 4.6e-05 1
UNIPROTKB|E2RFP2 - symbol:MEOX1 "Uncharacterized protein"... 118 4.6e-05 1
ZFIN|ZDB-GENE-980526-167 - symbol:eng2a "engrailed 2a" sp... 118 5.1e-05 1
WB|WBGene00045215 - symbol:ceh-63 species:6239 "Caenorhab... 107 5.1e-05 1
MGI|MGI:1342288 - symbol:Lbx2 "ladybird homeobox homolog ... 114 5.5e-05 1
RGD|1308443 - symbol:Nkx2-2 "NK2 homeobox 2" species:1011... 117 5.6e-05 1
ZFIN|ZDB-GENE-000128-8 - symbol:dbx1a "developing brain h... 119 5.6e-05 1
UNIPROTKB|P50221 - symbol:MEOX1 "Homeobox protein MOX-1" ... 117 6.0e-05 1
UNIPROTKB|F1RL72 - symbol:LOC100626834 "Uncharacterized p... 117 6.5e-05 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 124 6.6e-05 1
UNIPROTKB|J9P7F8 - symbol:NOTO "Uncharacterized protein" ... 99 6.8e-05 1
UNIPROTKB|A5D7C5 - symbol:MEOX2 "Uncharacterized protein"... 118 6.9e-05 1
UNIPROTKB|F1SEJ3 - symbol:MEOX2 "Uncharacterized protein"... 118 6.9e-05 1
WB|WBGene00011069 - symbol:ceh-62 species:6239 "Caenorhab... 120 7.2e-05 1
ZFIN|ZDB-GENE-030131-6376 - symbol:nobox "NOBOX oogenesis... 118 7.3e-05 2
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 119 8.6e-05 1
UNIPROTKB|P47902 - symbol:CDX1 "Homeobox protein CDX-1" s... 116 8.7e-05 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 123 8.7e-05 1
UNIPROTKB|F1NHF8 - symbol:CDX4 "Uncharacterized protein" ... 98 8.8e-05 1
UNIPROTKB|J9P485 - symbol:EMX2 "Uncharacterized protein" ... 98 8.8e-05 1
MGI|MGI:97347 - symbol:Nkx2-2 "NK2 transcription factor r... 116 9.3e-05 1
UNIPROTKB|J9NSM7 - symbol:EN1 "Uncharacterized protein" s... 112 9.8e-05 1
UNIPROTKB|K7GKV4 - symbol:LOC100623433 "Uncharacterized p... 116 0.00010 1
UNIPROTKB|F1MD21 - symbol:HOXA2 "Homeobox protein Hox-A2"... 118 0.00010 1
UNIPROTKB|Q0VCS4 - symbol:HOXA2 "Homeobox protein Hox-A2"... 118 0.00010 1
RGD|1563929 - symbol:Nobox "NOBOX oogenesis homeobox" spe... 120 0.00010 1
UNIPROTKB|H0YJ32 - symbol:SHOX2 "Short stature homeobox p... 110 0.00011 1
WB|WBGene00000437 - symbol:ceh-13 species:6239 "Caenorhab... 112 0.00012 1
UNIPROTKB|A2VDR0 - symbol:MEOX1 "Uncharacterized protein"... 114 0.00014 1
UNIPROTKB|I3L5H5 - symbol:LOC100623433 "Uncharacterized p... 115 0.00014 1
UNIPROTKB|H9L184 - symbol:Gga.48067 "Uncharacterized prot... 96 0.00015 1
UNIPROTKB|Q02814 - symbol:CHOX-CAD2 "Homeobox protein CHO... 96 0.00015 1
UNIPROTKB|Q90789 - symbol:Cnot "Uncharacterized protein" ... 96 0.00015 1
UNIPROTKB|G3V567 - symbol:PAX6 "Paired box protein Pax-6"... 96 0.00015 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 121 0.00015 2
UNIPROTKB|Q9YI38 - symbol:GGMOXr1 "Uncharacterized protei... 113 0.00015 1
UNIPROTKB|F1NM26 - symbol:MEOX2 "Uncharacterized protein"... 115 0.00016 1
MGI|MGI:103219 - symbol:Meox2 "mesenchyme homeobox 2" spe... 115 0.00016 1
WARNING: Descriptions of 115 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 116/222 (52%), Positives = 154/222 (69%)
Query: 11 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRN---TNGNGGFRALK 67
N+ V+D NM +SQ YP DV T IV Q GE +PKRR++K + +GG +
Sbjct: 2 NYTVDDQ--NMAFISQLYP-DVYTQ--IV-QPGEVKQPKRRRKKTKGSVASADGGNGLFR 55
Query: 68 KRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEET 127
KRKLT EQ +LEM FG+EHKLES+RKD+LAAELGLDPRQVAVWFQNRRAR K K++EE
Sbjct: 56 KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 115
Query: 128 YATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMD 187
Y LK +H+NVVV+K RLESEV LKE+L AE+EI++++E +EG S N+P ++ ++
Sbjct: 116 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSSNSPISS-SVSVE 174
Query: 188 TVDSPFTLDPFAGNLGWFDYEDLLYLLQQN-YISAAEWLLLH 228
++PF D G+ G DY+ L Y + +N YI AEW+ L+
Sbjct: 175 ANETPFFGDYKVGDDG-DDYDHLFYPVPENSYIDEAEWMSLY 215
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 107/225 (47%), Positives = 150/225 (66%)
Query: 11 NHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTN----------GN 60
N V+D+ N++L+SQ YP+ V TP +VPQQG +KP RR+++++ + GN
Sbjct: 3 NQNVDDH--NLLLISQLYPN-VYTP--LVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGN 57
Query: 61 GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
G FR KRKL+ EQ +LE+ F ++HKLES+RKD+LA+ELGLDPRQVAVWFQNRRAR K
Sbjct: 58 GWFR---KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWK 114
Query: 121 TKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSA 180
K++E+ Y LK A+E VVEK RL+SEV LKE+L AE+EI+++++ +EG N+P +
Sbjct: 115 NKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPIS 174
Query: 181 TIPTDMDTVDSPFTLDPFAGNLGWFDYEDLLYLLQQNYISAAEWL 225
+ T +PF D G G D E+LLY +YI +W+
Sbjct: 175 SSVTIEANHTTPFFGDYDIGFDGEAD-ENLLY--SPDYIDGLDWM 216
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 98/218 (44%), Positives = 133/218 (61%)
Query: 21 MVLLSQFYPSDVLTPTG--IVPQQ---GEPSKPKRRQRKRNTNGNGGFRA---------L 66
M+L SQ YP I+ Q GE SKP +R+RKR + G+ L
Sbjct: 11 MMLGSQVYPYTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSATNEEDVAEIGGML 70
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
+KRKLT EQ +LE FGNEHKLES RK+K+A ELGLDPRQVAVWFQNRRAR K KK+EE
Sbjct: 71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEE 130
Query: 127 TYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDM 186
YA LK H+NVV+ + +LES++ L E+LS A+ EI+K+SE +E + N+ S+++ +
Sbjct: 131 EYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMPTNSSSSSLSVEA 190
Query: 187 DTVDSPFTLDPFAGNLGWFDYEDLLYLLQQNYISAAEW 224
+ + F L P +Y Y+L NY+ + E+
Sbjct: 191 NNAPTDFELAPET------NYNIPFYMLDNNYLQSMEY 222
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/97 (53%), Positives = 68/97 (70%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KKR+LT EQ LLE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E
Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127
Query: 127 TYATLKTAHE-------NVVVEKTRLESEVATLKEKL 156
Y LK+ ++ ++V++ +L SEV +L EKL
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/171 (39%), Positives = 90/171 (52%)
Query: 25 SQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFG 84
+ + P D T TG P P K R N N +KK++LT+ Q LE F
Sbjct: 41 NSYTPGD--TQTG--PVISVPESEKIMNAYRFPNNNN--EMIKKKRLTSGQLASLERSFQ 94
Query: 85 NEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTR 144
E KL+SDRK KL+ ELGL PRQ+AVWFQNRRAR K K++E+ Y +L+ ++ V EK
Sbjct: 95 EEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQM 154
Query: 145 LESEVATLKEKLSVAEKEIKKMSELIEG-ISLNNPSATIPTDMDTVDSPFT 194
L EV L+ L + IKK ++ G I ++ T+ V P T
Sbjct: 155 LHDEVKKLRALLR-DQGLIKK--QISAGTIKVSGEEDTVEISSVVVAHPRT 202
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 61/161 (37%), Positives = 93/161 (57%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KKR+L+ Q + LE +F E+KLE +RK KLA ELGL PRQVAVWFQNRRAR KTK++E+
Sbjct: 62 KKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 121
Query: 127 TYATLKTAHENVV--VEKTRLESE-----VATLKEKLSVA--EKEIKKMSELI---EGIS 174
Y LKT ++++ + R ++E ++ LK KL+ E+E ++ + + IS
Sbjct: 122 DYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDIS 181
Query: 175 LNNPSATIPTDM-DTVDSPFTLDPFAGNLGWFDYEDLLYLL 214
+ ++P + + SP + L + + DL LL
Sbjct: 182 VKEEEVSLPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLL 222
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 56/111 (50%), Positives = 71/111 (63%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KKR+L EQ + LE F +KLESDRK +LA LGL PRQ+A+WFQNRRAR KTK++E+
Sbjct: 71 KKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEK 130
Query: 127 TYATLKTAHENVVVEKTRLESEVA-TLKEKLSVAEKEIKKMSELIEGISLN 176
Y LK E++ R E+EV T +KL A+ K E IE I+LN
Sbjct: 131 DYDMLKRQFESL-----RDENEVLQTQNQKLQ-AQVMALKSREPIESINLN 175
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 49/114 (42%), Positives = 74/114 (64%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KKR+L +Q + LE +F E+KLE +RK KLA ELGL PRQVAVWFQNRRAR KTK++E+
Sbjct: 59 KKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 118
Query: 127 TYATLKTAHENVV--VEKTRLES-----EVATLKEKLSVAEKEIKKMSELIEGI 173
Y LK ++++ + R ++ E++ +K K++ E++ + EG+
Sbjct: 119 DYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVN-GEEDNNNNKAITEGV 171
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 52/114 (45%), Positives = 75/114 (65%)
Query: 65 ALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
A KKR+L EQ + LE +F ++KLE +RK KLA ELGL PRQVA+WFQNRRAR KTK++
Sbjct: 70 AEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQL 129
Query: 125 EETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIK-KMS-ELIEGISLN 176
E Y LK+ + + + L+ + +L ++ KE+K K++ E ++GI N
Sbjct: 130 ERDYGVLKSNFDALKRNRDSLQRDNDSLLGQI----KELKAKLNVEGVKGIEEN 179
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KKR+L EQ + LE +F +KLE +RK +LA LGL PRQ+A+WFQNRRAR KTK++E+
Sbjct: 85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEK 144
Query: 127 TYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLN 176
Y TLK + + E L+ T +KL AE K E E I+LN
Sbjct: 145 DYDTLKRQFDTLKAENDLLQ----THNQKLQ-AEIMGLKNREQTESINLN 189
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/97 (44%), Positives = 64/97 (65%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
KK++LT +Q LE F KLE D K +L+ +LGL RQVAVWFQN+RAR KT+ +E
Sbjct: 11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEV 70
Query: 127 TYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEI 163
+ TL++ HE + +K +LE +V L+++L A ++
Sbjct: 71 QHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 49/126 (38%), Positives = 73/126 (57%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGL 103
EP ++ +K N N N +R+ + EQ + LEM F +E +LE +K +LA ELGL
Sbjct: 15 EPFLTMKKMKKSNHNKNN------QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGL 68
Query: 104 DPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLS-VAEKE 162
PRQVA+WFQN+RAR K+K++E Y L+ ++N+ + L+ E L +L + E
Sbjct: 69 QPRQVAIWFQNKRARWKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEAT 128
Query: 163 IKKMSE 168
KK E
Sbjct: 129 QKKTQE 134
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 198 (74.8 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 51/133 (38%), Positives = 75/133 (56%)
Query: 56 NTNGNGGFRAL--KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
N + +G L KK++L EQ LE F +KLE +RK +LA LGL PRQ+A+WFQ
Sbjct: 102 NLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQ 161
Query: 114 NRRARDKTKKIEETYATLK-------TAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRAR KTK++E Y +LK + +++++ +L +E+ LK+ +IK+
Sbjct: 162 NRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRKESAKIKR- 220
Query: 167 SELIEGISLNNPS 179
E E NN S
Sbjct: 221 -EFAEASWSNNGS 232
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 46/98 (46%), Positives = 61/98 (62%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRK-----D---KLAAELGLDPRQVAVWFQNRRAR 118
KK+K+T+EQ + LE F E KL DRK D KL+ ELGL PRQ+AVWFQNR+AR
Sbjct: 71 KKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKAR 130
Query: 119 DKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKL 156
K K++E Y +L+ + V EK L+ E+ LK +
Sbjct: 131 WKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSMI 168
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 39/101 (38%), Positives = 67/101 (66%)
Query: 68 KRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEET 127
+++ + EQ + LE+ F +E +LE +K ++A ELGL PRQVA+WFQN+RAR KTK++E+
Sbjct: 31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKE 90
Query: 128 YATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSE 168
Y TL+ + N+ + ++ E +L +L +E+++ E
Sbjct: 91 YNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKE 131
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 44/112 (39%), Positives = 67/112 (59%)
Query: 54 KRNTNGNGGFRAL--KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVW 111
+ N + +G L KK++L EQ + LE F +KLE +RK +LA LG+ PRQ+A+W
Sbjct: 72 EENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIW 131
Query: 112 FQNRRARDKTKKIEETYATLKTAHENVVVEKTRLES-EVATLKEKLSVAEKE 162
FQNRRAR KT+++E Y +LK E++ + L + L E +++ KE
Sbjct: 132 FQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKE 183
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 42/92 (45%), Positives = 52/92 (56%)
Query: 62 GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT 121
G A KK +LT +Q+ LLE F + L +K LA +L L PRQV VWFQNRRAR K
Sbjct: 108 GISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKL 167
Query: 122 KKIEETYATLKTAHENVVVEKTRLESEVATLK 153
K+ E LK E + E RL+ E+ LK
Sbjct: 168 KQTEVDCEFLKKCCETLADENIRLQKEIQELK 199
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 180 (68.4 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 50/130 (38%), Positives = 70/130 (53%)
Query: 30 SDVLTPTGIVPQQGEPSKPKRRQRKRN-TNGNGGFRALKKRKLTAEQAELLEMHFGNEHK 88
S V + TG ++ E + P Q R ++ G + KK +L+ +Q+ +LE F +
Sbjct: 94 STVSSSTGKRSEREEDTDP---QGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHST 150
Query: 89 LESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESE 148
L +K LA +LGL RQV VWFQNRRAR K K+ E L+ EN+ E RL+ E
Sbjct: 151 LNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKE 210
Query: 149 VATLKE-KLS 157
V L+ KLS
Sbjct: 211 VTELRALKLS 220
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 178 (67.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 45/97 (46%), Positives = 55/97 (56%)
Query: 62 GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT 121
G A KK +LT +Q+ LLE +F L +K LA +L L PRQV VWFQNRRAR K
Sbjct: 121 GVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKL 180
Query: 122 KKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLS 157
K+ E LK E + E RL+ E+ LK KLS
Sbjct: 181 KQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLS 217
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 180 (68.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 46/101 (45%), Positives = 58/101 (57%)
Query: 58 NGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
+GNG + KK +L+ EQA +LE F L +K LA +L L RQV VWFQNRRA
Sbjct: 153 SGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRA 212
Query: 118 RDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLS 157
R K K+ E LK EN+ E RL+ EV+ L+ KLS
Sbjct: 213 RTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLS 253
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 173 (66.0 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 44/113 (38%), Positives = 58/113 (51%)
Query: 57 TNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
++ +G KK +LT EQ+ LLE F H L +K+ LA L L PRQ+ VWFQNRR
Sbjct: 129 SHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIEVWFQNRR 188
Query: 117 ARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSEL 169
AR K K+ E LK ++ E RL EV L+ + V + S L
Sbjct: 189 ARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRA-MKVGPTTVNSASSL 240
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 172 (65.6 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 44/98 (44%), Positives = 55/98 (56%)
Query: 61 GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
GG KK +L+ +Q+ +LE F + L +K LA +LGL RQV VWFQNRRAR K
Sbjct: 129 GGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTK 188
Query: 121 TKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLS 157
K+ E LK E + E RLE E A L+ KLS
Sbjct: 189 LKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLS 226
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 172 (65.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/104 (41%), Positives = 56/104 (53%)
Query: 50 RRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVA 109
R + N + NG R KK +L+ +Q+ LE F L +K LA +L L PRQV
Sbjct: 175 RASNEDNDDENGSTR--KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVE 232
Query: 110 VWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 153
VWFQNRRAR K K+ E LK E++ E RL+ EV L+
Sbjct: 233 VWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELR 276
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/96 (43%), Positives = 51/96 (53%)
Query: 58 NGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
+ N G R KK +LT EQ+ LLE F H L +K LA L L RQV VWFQNRRA
Sbjct: 60 DSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRA 119
Query: 118 RDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 153
R K K E LK ++ + RL+ EV L+
Sbjct: 120 RSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELR 155
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 168 (64.2 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 46/101 (45%), Positives = 58/101 (57%)
Query: 59 GNG-GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
GNG G R KK +L+ +QA +LE F L +K LA +L L RQV VWFQNRRA
Sbjct: 156 GNGDGSR--KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRA 213
Query: 118 RDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLS 157
R K K+ E LK +N+ E RL+ EV+ L+ KLS
Sbjct: 214 RTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLS 254
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 160 (61.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 60 NGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
+GG + KK +L+ +Q+ LE F + L +K LA +L L RQV VWFQNRRAR
Sbjct: 123 DGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRART 182
Query: 120 KTKKIEETYATLKTAHENVVVEKTRLESEVATLKE-KLS 157
K K+ E LK E + E RL+ E L+ KLS
Sbjct: 183 KLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLS 221
>WB|WBGene00000439 [details] [associations]
symbol:ceh-16 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009957 "epidermal cell fate specification" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0045026 "plasma membrane fusion" evidence=IGI;IMP] [GO:0048859
"formation of anatomical boundary" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009792
GO:GO:0043565 GO:GO:0045944 GO:GO:0040011 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0040015 GO:GO:0000976 GO:GO:0010172
GO:GO:0009957 GO:GO:0048859 GeneTree:ENSGT00680000099870
EMBL:AY647457 EMBL:FO080380 PIR:S44752 PIR:T15488
RefSeq:NP_498898.2 UniGene:Cel.25260 ProteinModelPortal:P34326
SMR:P34326 STRING:P34326 EnsemblMetazoa:C13G5.1.1
EnsemblMetazoa:C13G5.1.2 GeneID:191618 KEGG:cel:CELE_C13G5.1
UCSC:C13G5.1 CTD:191618 WormBase:C13G5.1 eggNOG:NOG306728
HOGENOM:HOG000022417 InParanoid:P34326 OMA:PTFASPN NextBio:949698
GO:GO:0045026 PROSITE:PS00033 Uniprot:P34326
Length = 187
Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 36/103 (34%), Positives = 54/103 (52%)
Query: 23 LLSQFYPSDVLTPTGIVPQQGEPSK-PK-RRQRKRNTNGNGGFRALKKRKLTA---EQAE 77
+ S YP+ V + PS P+ R+ RKR + G+ G +KR TA +Q +
Sbjct: 45 IASSMYPAWVFSTR----YSDRPSAGPRHRKSRKRESTGSSGSSEEEKRPRTAFTGDQLD 100
Query: 78 LLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
L+ F L R+ +LA ELGL+ Q+ +WFQN+RA+ K
Sbjct: 101 RLKTEFRESRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLK 143
>ZFIN|ZDB-GENE-980526-216 [details] [associations]
symbol:eng1a "engrailed 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-216 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 EMBL:CABZ01070420 EMBL:BC080209 IPI:IPI00500053
UniGene:Dr.75072 SMR:Q68EL7 STRING:Q68EL7
Ensembl:ENSDART00000012506 InParanoid:Q68EL7 Uniprot:Q68EL7
Length = 231
Score = 132 (51.5 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 6 IITNTNHQVEDNKSNMVLLSQFYPSDVLTPTGI--VPQQGEPSK-PKRRQRKRNTNGNGG 62
+ ++ +++VE S S+ +L P + PS P+ R+ K+ N
Sbjct: 82 VSSSQSNKVEQGSSKSSSPSKDSQKQILWPAWVYCTRYSDRPSSGPRTRKLKKKNNNTES 141
Query: 63 FRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
+ TAEQ + L+ F + R+ LA ELGL+ Q+ +WFQN+RA+ K
Sbjct: 142 DDKRPRTAFTAEQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>UNIPROTKB|H9L1U3 [details] [associations]
symbol:H9L1U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00610000086217 EMBL:AADN02076603
Ensembl:ENSGALT00000035653 OMA:FREQRYI Uniprot:H9L1U3
Length = 119
Score = 117 (46.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/87 (32%), Positives = 40/87 (45%)
Query: 34 TPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDR 93
TP + + P+RR GG R + K +A Q + LE F + + +
Sbjct: 28 TPLSLPAAHAVRAAPRRRSPAHEAEAGGGARP--RTKFSAVQLQELERSFREQRYIGASE 85
Query: 94 KDKLAAELGLDPRQVAVWFQNRRARDK 120
K +LAA L L Q+ WFQNRR + K
Sbjct: 86 KRRLAAALDLSQSQIKTWFQNRRMKFK 112
>UNIPROTKB|A8MWF9 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001757 EMBL:AC068675 EMBL:AC004149
RefSeq:NP_001035091.1 UniGene:Hs.438 DNASU:4222 GeneID:4222
KEGG:hsa:4222 CTD:4222 HGNC:HGNC:7013 PharmGKB:PA30747
HOGENOM:HOG000230987 KO:K09322 GenomeRNAi:4222 NextBio:16659
IPI:IPI00744956 ProteinModelPortal:A8MWF9 SMR:A8MWF9 STRING:A8MWF9
Ensembl:ENST00000393661 HOVERGEN:HBG100054 ArrayExpress:A8MWF9
Bgee:A8MWF9 Uniprot:A8MWF9
Length = 139
Score = 117 (46.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 34/101 (33%), Positives = 46/101 (45%)
Query: 29 PSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGN-----GGFRALKKRK-LTAEQAELLEMH 82
P D G + E +RR+ + N G +A K+R T EQ LE
Sbjct: 15 PGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAE 74
Query: 83 FGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
F + + L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 75 FAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 115
>WB|WBGene00000432 [details] [associations]
symbol:ceh-7 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099870
EMBL:AF091459 EMBL:Z66494 PIR:S05708 PIR:T43646 RefSeq:NP_495848.1
UniGene:Cel.9303 ProteinModelPortal:P20270 SMR:P20270
EnsemblMetazoa:C34C6.8 GeneID:174391 KEGG:cel:CELE_C34C6.8
UCSC:C34C6.8 CTD:174391 WormBase:C34C6.8 eggNOG:NOG298372
HOGENOM:HOG000294138 InParanoid:P20270 OMA:RRIRMRR NextBio:883830
Uniprot:P20270
Length = 84
Score = 116 (45.9 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 67 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR 118
++ T EQ LLEM+F + D +++LA L LD QV +WFQNRR R
Sbjct: 26 RRTTFTVEQLYLLEMYFAQSQYVGCDERERLARILSLDEYQVKIWFQNRRIR 77
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 131 (51.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/137 (29%), Positives = 71/137 (51%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE----- 125
+TA+Q E L+ + N K +++L++E GLD R V VWFQNRRA++K K +
Sbjct: 161 ITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQR 220
Query: 126 --ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSEL--IEGI--SLNNPS 179
+ + +K + N +K ++ E ++S ++ MSE+ GI SLN+ S
Sbjct: 221 WGQYFRNMKRSRGNSKSDKDSIQEEGPDSDAEVSFTDEP--SMSEMNHSNGIYNSLNDSS 278
Query: 180 ATIPTDMDTVDSPFTLD 196
+ + + PF+L+
Sbjct: 279 PVLGRQAGS-NGPFSLE 294
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 110 (43.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/54 (50%), Positives = 29/54 (53%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
T EQ E LE F L + KLA LGL QV VWFQNRR K KKI+
Sbjct: 43 TDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRT--KQKKID 94
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 129 (50.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 127 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 185
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + + EK + +LS E +I +
Sbjct: 186 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVSDSELSFREDQI--L 243
Query: 167 SEL 169
SEL
Sbjct: 244 SEL 246
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 129 (50.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 148 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 206
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + + EK + +LS E +I +
Sbjct: 207 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGSSKQEKESSAEDCGVSDSELSFREDQI--L 264
Query: 167 SEL 169
SEL
Sbjct: 265 SEL 267
>ZFIN|ZDB-GENE-980526-40 [details] [associations]
symbol:eng2b "engrailed 2b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-40 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HSSP:P14653 EMBL:BC071290 IPI:IPI00512460
UniGene:Dr.498 ProteinModelPortal:Q6IQW3 SMR:Q6IQW3 STRING:Q6IQW3
InParanoid:Q6IQW3 ArrayExpress:Q6IQW3 Uniprot:Q6IQW3
Length = 261
Score = 125 (49.1 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ T R + TAEQ + L+ F N L R+ LA ELGL+
Sbjct: 156 SGPRSRKPKKKTPTKEDKRP--RTAFTAEQLQRLKNEFQNNRYLTEQRRQALAQELGLNE 213
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 214 SQIKIWFQNKRAKIK 228
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 128 (50.1 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 148 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 206
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + EK + +LS E +I +
Sbjct: 207 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVSDSELSFREDQI--L 264
Query: 167 SEL 169
SEL
Sbjct: 265 SEL 267
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 128 (50.1 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 148 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 206
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + EK + +LS E +I +
Sbjct: 207 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVSDSELSFREDQI--L 264
Query: 167 SEL 169
SEL
Sbjct: 265 SEL 267
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 128 (50.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 153 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 211
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + EK + +LS E +I +
Sbjct: 212 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQEKESSAEDCGVSDSELSFREDQI--L 269
Query: 167 SEL 169
SEL
Sbjct: 270 SEL 272
>UNIPROTKB|F6USR4 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AADN02000860 EMBL:AADN02000861
EMBL:AADN02000862 EMBL:AADN02000863 EMBL:AADN02000864
IPI:IPI00821029 ProteinModelPortal:F6USR4
Ensembl:ENSGALT00000037944 ArrayExpress:F6USR4 Uniprot:F6USR4
Length = 154
Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 33 LTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRK-LTAEQAELLEMHFGNEHKLES 91
L+P + G+ ++ N + K+R T EQ LE F + + L
Sbjct: 5 LSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTR 64
Query: 92 DRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TRLESEVA 150
R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T L SE++
Sbjct: 65 LRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTLLPSELS 123
>UNIPROTKB|Q90Z54 [details] [associations]
symbol:CDXB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 CTD:1046
EMBL:AADN02013531 EMBL:AADN02013532 EMBL:AF353624 IPI:IPI00575574
RefSeq:NP_989945.1 UniGene:Gga.49855 SMR:Q90Z54
Ensembl:ENSGALT00000012401 GeneID:395320 KEGG:gga:395320
InParanoid:Q90Z54 OMA:YHHVPNM NextBio:20815405 Uniprot:Q90Z54
Length = 263
Score = 124 (48.7 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 40/105 (38%), Positives = 52/105 (49%)
Query: 33 LTPTGIV-PQQGEPSKPKRRQ----RKR-NTNGNGGFRALKKRKL--TAEQAELLEMHFG 84
L P G V QQ P+ + RK TN G R +K ++ T Q LE F
Sbjct: 113 LPPAGTVGTQQVSPTNQRHSSYEWMRKTVPTNTTGKTRTKEKYRVVYTDHQRLELEKEFH 172
Query: 85 NEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
+ RK +LAA LGL RQV +WFQNRRA+++ KKI +
Sbjct: 173 CNRYITIRRKSELAANLGLSERQVKIWFQNRRAKERKIIKKKISQ 217
>ZFIN|ZDB-GENE-990708-7 [details] [associations]
symbol:otpb "orthopedia homolog b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IGI] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990708-7 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 HSSP:P06601
EMBL:AF071496 EMBL:BC076366 IPI:IPI00512446 IPI:IPI00817208
RefSeq:NP_571175.1 UniGene:Dr.81295 ProteinModelPortal:Q6DGH9
SMR:Q6DGH9 STRING:Q6DGH9 Ensembl:ENSDART00000081249
Ensembl:ENSDART00000134606 GeneID:30316 KEGG:dre:30316 CTD:30316
eggNOG:NOG256838 HOVERGEN:HBG001617 InParanoid:Q6DGH9
OrthoDB:EOG4FXR8D NextBio:20806755 ArrayExpress:Q6DGH9 Bgee:Q6DGH9
Uniprot:Q6DGH9
Length = 315
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 29 PSDVLTPTGIVPQ--QGEPSKPKRRQRKRNTNGNGGFRALKKRK-----LTAEQAELLEM 81
P + ++ G P Q +K + +Q+++N+N GG + +K+K T Q LE
Sbjct: 57 PGEEISNGGSNPNGMQQVNAKDQEKQQQQNSNQTGGQQNQQKQKRHRTRFTPAQLNELER 116
Query: 82 HFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
F H + +++LA +GL +V VWFQNRRA+ K +K
Sbjct: 117 SFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRK 158
>UNIPROTKB|F1NHM4 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
EMBL:AADN02013532 IPI:IPI00820756 Ensembl:ENSGALT00000039471
Uniprot:F1NHM4
Length = 60
Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 9 TDHQRLELEKEFHCNRYITIRRKSELAANLGLSERQVKIWFQNRRAKER 57
>UNIPROTKB|F1MCF6 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 GO:GO:0060349
EMBL:DAAA02020624 IPI:IPI00867478 Ensembl:ENSBTAT00000015934
OMA:MTIKEEY Uniprot:F1MCF6
Length = 118
Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 15 TDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 63
>UNIPROTKB|F1MJX0 [details] [associations]
symbol:CDX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060711 "labyrinthine layer development" evidence=IEA]
[GO:0045597 "positive regulation of cell differentiation"
evidence=IEA] [GO:0045197 "establishment or maintenance of
epithelial cell apical/basal polarity" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001829 "trophectodermal cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000794
"condensed nuclear chromosome" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0017053
GO:GO:0003714 GO:GO:0009952 GO:GO:0045597 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000122 GO:GO:0001829
GO:GO:0000794 GO:GO:0008333 GO:GO:0035019 GO:GO:0001568
GO:GO:0000976 GO:GO:0060711 GO:GO:0045197 EMBL:DAAA02033157
IPI:IPI00838985 Ensembl:ENSBTAT00000047376 Uniprot:F1MJX0
Length = 142
Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++ KK+++
Sbjct: 30 TDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQ 87
>RGD|621233 [details] [associations]
symbol:Cdx1 "caudal type homeo box 1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0060349 "bone
morphogenesis" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:621233 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:M91450 IPI:IPI00766495 PIR:S27397 ProteinModelPortal:Q05095
SMR:Q05095 STRING:Q05095 UCSC:RGD:621233 InParanoid:Q05095
ArrayExpress:Q05095 Genevestigator:Q05095
GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 13 TDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>UNIPROTKB|Q05095 [details] [associations]
symbol:Cdx1 "Homeobox protein CDX-1" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621233
GO:GO:0005634 GO:GO:0009952 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0060349 eggNOG:NOG291290 HOGENOM:HOG000115975
HOVERGEN:HBG005302 OrthoDB:EOG42FSK7 EMBL:M91450 IPI:IPI00766495
PIR:S27397 ProteinModelPortal:Q05095 SMR:Q05095 STRING:Q05095
UCSC:RGD:621233 InParanoid:Q05095 ArrayExpress:Q05095
Genevestigator:Q05095 GermOnline:ENSRNOG00000018624 Uniprot:Q05095
Length = 123
Score = 105 (42.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 13 TDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 61
>UNIPROTKB|G3V2N9 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:G3V2N9 SMR:G3V2N9 Ensembl:ENST00000555556
ArrayExpress:G3V2N9 Bgee:G3V2N9 Uniprot:G3V2N9
Length = 166
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 67 KKRKL-TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
K R L ++Q E LE F +H +SD++ ++A +G+ P+++ VWFQNRRA K +K+E
Sbjct: 63 KTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRA--KWRKME 120
Query: 126 E 126
+
Sbjct: 121 K 121
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 123 KQNDDSEAGAKR-PRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 181
Query: 114 NRRARDKTKK 123
NRRA++K K
Sbjct: 182 NRRAKEKRLK 191
>UNIPROTKB|E1B707 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
EMBL:DAAA02030322 IPI:IPI00705587 RefSeq:NP_001179057.1
UniGene:Bt.106435 Ensembl:ENSBTAT00000022088 GeneID:538906
KEGG:bta:538906 NextBio:20877656 Uniprot:E1B707
Length = 196
Score = 118 (46.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/75 (42%), Positives = 40/75 (53%)
Query: 58 NGNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
+G G R K R TA+Q LE F + L +D LA+ LGL QV WFQNRR
Sbjct: 78 SGQAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRR 137
Query: 117 ARDKTKKIEETYATL 131
A+ K + +EE A L
Sbjct: 138 AKLK-RDVEEMRADL 151
>RGD|1561172 [details] [associations]
symbol:Lbx2 "ladybird homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
RGD:1561172 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 EMBL:CH473957
GeneTree:ENSGT00700000104206 KO:K09353 CTD:85474 OMA:MVPRAPS
OrthoDB:EOG4NKBWK IPI:IPI00196022 RefSeq:NP_001102714.1
UniGene:Rn.218501 Ensembl:ENSRNOT00000011189 GeneID:500224
KEGG:rno:500224 UCSC:RGD:1561172 NextBio:705462 Uniprot:D4A7L0
Length = 196
Score = 118 (46.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/96 (37%), Positives = 46/96 (47%)
Query: 37 GIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKD 95
G P+ +PS+ + G G R K R T +Q LE F + L +D
Sbjct: 55 GHSPRAPQPSEGRAVPEAPPGPGTGVRRRRKSRTAFTPQQVLELERRFVFQKYLAPSERD 114
Query: 96 KLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATL 131
LAA LGL QV WFQNRRA+ K + +EE A L
Sbjct: 115 GLAARLGLANAQVVTWFQNRRAKLK-RDVEEMRADL 149
>UNIPROTKB|F6R243 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 EMBL:AADN02028624 IPI:IPI00819151
ProteinModelPortal:F6R243 Ensembl:ENSGALT00000040457 Uniprot:F6R243
Length = 117
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++ KK+++
Sbjct: 14 TDHQRLELEKEFHYSRYITIRRKAELAAALGLTERQVKIWFQNRRAKERKVNKKKLQQ 71
>MGI|MGI:103220 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10090 "Mus
musculus" [GO:0001757 "somite specification" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:103220 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757 CTD:4222
eggNOG:NOG282563 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J EMBL:Z15103 EMBL:BC011082
IPI:IPI00108443 PIR:A49122 RefSeq:NP_034921.1 UniGene:Mm.3404
ProteinModelPortal:P32442 SMR:P32442 STRING:P32442 PRIDE:P32442
Ensembl:ENSMUST00000057054 GeneID:17285 KEGG:mmu:17285
NextBio:291792 Bgee:P32442 CleanEx:MM_MEOX1 Genevestigator:P32442
GermOnline:ENSMUSG00000001493 Uniprot:P32442
Length = 253
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 37 GIVPQQGEPSKPKRRQRKRNTNG-NGGFR---ALKKRK----LTAEQAELLEMHFGNEHK 88
G + + E K RR+++R+ N NGG + + K RK T EQ LE F + +
Sbjct: 136 GTIANETE-KKSSRRKKERSDNQENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNY 194
Query: 89 LESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 195 LTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 229
>UNIPROTKB|Q05917 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030175 "filopodium" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IDA]
[GO:0042327 "positive regulation of phosphorylation" evidence=IDA]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0003700 GO:GO:0030027
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0030175 GO:GO:0030426 GO:GO:0045727 GO:GO:0000976
GO:GO:0042327 PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 KO:K09319 EMBL:L12696 EMBL:L12697
IPI:IPI00579837 PIR:F48423 RefSeq:NP_001254648.1 UniGene:Gga.56328
GeneID:100859435 KEGG:gga:100859435 CTD:2020 Uniprot:Q05917
Length = 289
Score = 121 (47.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA ELGL+
Sbjct: 182 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLN 240
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 241 ESQIKIWFQNKRAKIK 256
>UNIPROTKB|J9P1P5 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 OMA:MVPRAPS EMBL:AAEX03010965
Ensembl:ENSCAFT00000042884 Uniprot:J9P1P5
Length = 192
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/72 (44%), Positives = 38/72 (52%)
Query: 59 GNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
G G R K R TA+Q LE F + L +D LAA LGL QV WFQNRRA
Sbjct: 79 GRAGRRRRKSRTAFTAQQVLELERRFLFQKYLAPSERDGLAARLGLANAQVVTWFQNRRA 138
Query: 118 RDKTKKIEETYA 129
+ K + +EE A
Sbjct: 139 KLK-RDVEEMRA 149
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 123 (48.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 54 KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQ 113
K+N + G + + +TA+Q E L+ + N K +++L++E GLD R V VWFQ
Sbjct: 151 KQNDDSETGAKR-PRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 209
Query: 114 NRRARDKTKKIE-------ETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKM 166
NRRA++K K + + Y ++K + EK + +LS + +I +
Sbjct: 210 NRRAKEKRLKKDAGRHRWGQFYKSVKRNRGSSKTEKESSADDAGLSDSELSFRDDQI--L 267
Query: 167 SELIEGISLNNPSATIPTDMDTVDSPFTLD 196
S+L L + ++ + ++ F+LD
Sbjct: 268 SDLGHANGLYGSVGDV-SNGNMLNGSFSLD 296
>UNIPROTKB|F1NF72 [details] [associations]
symbol:F1NF72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 GeneTree:ENSGT00680000099870
PROSITE:PS00033 InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
EMBL:AADN02016916 IPI:IPI00812139 Ensembl:ENSGALT00000019794
OMA:ASNDEKR Uniprot:F1NF72
Length = 100
Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
TAEQ + L+ F + R+ LA EL L+ Q+ +WFQN+RA+ K
Sbjct: 11 TAEQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 59
>UNIPROTKB|I3LF97 [details] [associations]
symbol:I3LF97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060847
"endothelial cell fate specification" evidence=IEA] [GO:0060442
"branching involved in prostate gland morphogenesis" evidence=IEA]
[GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048839 "inner
ear development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0030539 "male genitalia
development" evidence=IEA] [GO:0030510 "regulation of BMP signaling
pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003281
"ventricular septum development" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0001886 "endothelial cell
morphogenesis" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00670000097683 Ensembl:ENSSSCT00000022309
Uniprot:I3LF97
Length = 100
Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 64 RALKKR-KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTK 122
R KKR T Q + LE + + D++ +++A L RQV +WFQNRR ++K K
Sbjct: 33 RGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEK-K 91
Query: 123 KIEETYAT 130
I + T
Sbjct: 92 VINKLKTT 99
>UNIPROTKB|F1MXQ1 [details] [associations]
symbol:F1MXQ1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000047 InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:DAAA02012122
EMBL:DAAA02012123 IPI:IPI00718569 Ensembl:ENSBTAT00000028648
OMA:PSTHMEA Uniprot:F1MXQ1
Length = 186
Score = 115 (45.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 79 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 137
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 138 ESQIKIWFQNKRAKIK 153
>RGD|1308911 [details] [associations]
symbol:Meox1 "mesenchyme homeobox 1" species:10116 "Rattus
norvegicus" [GO:0001757 "somite specification" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0071837 "HMG box
domain binding" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308911 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH473948
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J IPI:IPI00203787 RefSeq:NP_001102307.1
UniGene:Rn.149759 Ensembl:ENSRNOT00000028220 GeneID:363684
KEGG:rno:363684 UCSC:RGD:1308911 NextBio:683991 Uniprot:D4A532
Length = 253
Score = 119 (46.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 37 GIVPQQGEPSKPKRRQRKRNTNG-NGGFR---ALKKRK----LTAEQAELLEMHFGNEHK 88
G + + E K RR+++R+ N NGG + + K RK T EQ LE F + +
Sbjct: 136 GTIAHETE-KKLSRRKKERSDNPENGGGKPEGSSKARKERTAFTKEQLRELEAEFAHHNY 194
Query: 89 LESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 195 LTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 229
>UNIPROTKB|F1P4T4 [details] [associations]
symbol:HOXD13 "Homeobox protein Hox-D13" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00670000097683
IPI:IPI00598090 EMBL:AADN02020034 Ensembl:ENSGALT00000015092
OMA:CANDQTQ Uniprot:F1P4T4
Length = 111
Score = 101 (40.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 64 RALKKR-KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
R KKR T Q + LE + + D++ +++A L RQV +WFQNRR +DK
Sbjct: 43 RGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK 100
>UNIPROTKB|F1SNT2 [details] [associations]
symbol:LBX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104206 KO:K09353 OMA:MVPRAPS EMBL:CU468647
RefSeq:XP_003125045.1 Ensembl:ENSSSCT00000009066 GeneID:100514830
KEGG:ssc:100514830 Uniprot:F1SNT2
Length = 196
Score = 115 (45.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/72 (44%), Positives = 38/72 (52%)
Query: 59 GNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
G G R K R TA+Q LE F + L +D LAA LGL QV WFQNRRA
Sbjct: 79 GPAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRA 138
Query: 118 RDKTKKIEETYA 129
+ K + +EE A
Sbjct: 139 KLK-RDVEEMRA 149
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 116 (45.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + N K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 161 ITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 213
>UNIPROTKB|E2RFP2 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 OMA:QPPAPVW
EMBL:AAEX03006431 RefSeq:XP_848980.1 ProteinModelPortal:E2RFP2
Ensembl:ENSCAFT00000022993 GeneID:607271 KEGG:cfa:607271
NextBio:20893009 Uniprot:E2RFP2
Length = 254
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 33/96 (34%), Positives = 47/96 (48%)
Query: 31 DVLTPTGIVPQQGEPSKPKRRQRKRNTNGN--GGFRALKKRK-LTAEQAELLEMHFGNEH 87
+VL T ++ + K + + G GG +A K+R T EQ LE F + +
Sbjct: 135 EVLGSTASEMEKKSSRRKKESSDNQESRGKPEGGSKARKERTAFTKEQLRELEAEFAHHN 194
Query: 88 KLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 195 YLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 230
>ZFIN|ZDB-GENE-980526-167 [details] [associations]
symbol:eng2a "engrailed 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0001708 "cell fate specification" evidence=IGI]
InterPro:IPR000047 InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-167 GO:GO:0005634 GO:GO:0001708 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0000976
GeneTree:ENSGT00680000099870 eggNOG:NOG306728 PROSITE:PS00033
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 OrthoDB:EOG4H72D0 EMBL:X68151
EMBL:X68446 EMBL:X07622 EMBL:X59126 IPI:IPI00509115 PIR:A56557
PIR:S00562 RefSeq:NP_571119.2 UniGene:Dr.162132 UniGene:Dr.162307
UniGene:Dr.75073 ProteinModelPortal:P09015 SMR:P09015 STRING:P09015
Ensembl:ENSDART00000031700 GeneID:30243 KEGG:dre:30243 CTD:30243
InParanoid:P09015 OMA:ERHEECE NextBio:20806696 ArrayExpress:P09015
Bgee:P09015 Uniprot:P09015
Length = 265
Score = 118 (46.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ R + TAEQ + L+ F L R+ LA ELGL+
Sbjct: 160 SGPRSRKPKKKAASKEDKRP--RTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELGLNE 217
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 218 SQIKIWFQNKRAKIK 232
>WB|WBGene00045215 [details] [associations]
symbol:ceh-63 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 EMBL:FO080254 RefSeq:NP_001123094.1
UniGene:Cel.37684 ProteinModelPortal:A3FPJ2 SMR:A3FPJ2
EnsemblMetazoa:C02F12.10 GeneID:6418830 KEGG:cel:CELE_C02F12.10
UCSC:C02F12.10 CTD:6418830 WormBase:C02F12.10 eggNOG:NOG310362
HOGENOM:HOG000246442 InParanoid:A3FPJ2 OMA:ELTECQV NextBio:20901882
Uniprot:A3FPJ2
Length = 152
Score = 107 (42.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 64 RALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
R K+ T+EQ LLE+ F + DR+ +LA + L QV WFQNRR + +
Sbjct: 41 RPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVKTWFQNRRTKKR 97
>MGI|MGI:1342288 [details] [associations]
symbol:Lbx2 "ladybird homeobox homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1342288 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104206 HSSP:P13297
HOGENOM:HOG000007247 HOVERGEN:HBG006244 KO:K09353 CTD:85474
eggNOG:NOG235470 OMA:MVPRAPS EMBL:AF146150 EMBL:AK002897
EMBL:BC109347 IPI:IPI00624409 RefSeq:NP_034822.1 UniGene:Mm.20359
ProteinModelPortal:Q9WUN8 SMR:Q9WUN8 PhosphoSite:Q9WUN8
PRIDE:Q9WUN8 Ensembl:ENSMUST00000041265 GeneID:16815 KEGG:mmu:16815
UCSC:uc009cmi.1 InParanoid:Q9WUN8 OrthoDB:EOG4NKBWK NextBio:290696
Bgee:Q9WUN8 CleanEx:MM_LBX2 Genevestigator:Q9WUN8 Uniprot:Q9WUN8
Length = 195
Score = 114 (45.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 34/87 (39%), Positives = 43/87 (49%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKDKLAAELG 102
+PS+ + G G R K R TA+Q LE F + L +D LAA LG
Sbjct: 63 QPSEGRAAPEAPPGPGAGVRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLG 122
Query: 103 LDPRQVAVWFQNRRARDKTKKIEETYA 129
L QV WFQNRRA+ K + +EE A
Sbjct: 123 LANAQVVTWFQNRRAKLK-RDVEEMRA 148
>RGD|1308443 [details] [associations]
symbol:Nkx2-2 "NK2 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0001159 "core promoter proximal region DNA binding"
evidence=ISO] [GO:0003323 "type B pancreatic cell development"
evidence=ISO] [GO:0003326 "pancreatic A cell fate commitment"
evidence=ISO] [GO:0003327 "type B pancreatic cell fate commitment"
evidence=ISO] [GO:0003329 "pancreatic PP cell fate commitment"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0007224 "smoothened
signaling pathway" evidence=ISO] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021529 "spinal cord
oligodendrocyte cell differentiation" evidence=ISO] [GO:0021530
"spinal cord oligodendrocyte cell fate specification" evidence=ISO]
[GO:0021554 "optic nerve development" evidence=IEP] [GO:0030154
"cell differentiation" evidence=ISO] [GO:0031018 "endocrine
pancreas development" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045595 "regulation of cell
differentiation" evidence=ISO] [GO:0045597 "positive regulation of
cell differentiation" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048468 "cell
development" evidence=ISO] [GO:0048565 "digestive tract
development" evidence=ISO] [GO:0048665 "neuron fate specification"
evidence=ISO] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1308443 GO:GO:0005634 GO:GO:0009749 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032570 GO:GO:0021554 OrthoDB:EOG4Z36FJ
IPI:IPI00952221 Ensembl:ENSRNOT00000066457 UCSC:RGD:1308443
ArrayExpress:D3ZR25 Uniprot:D3ZR25
Length = 248
Score = 117 (46.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEETYATLK 132
+ L P QV +WFQN R + K + E+ L+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEKGMEDLR 196
>ZFIN|ZDB-GENE-000128-8 [details] [associations]
symbol:dbx1a "developing brain homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0021515 "cell
differentiation in spinal cord" evidence=IGI] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-000128-8 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06602
GeneTree:ENSGT00700000104097 EMBL:AF030284 EMBL:BC095020
IPI:IPI00496328 RefSeq:NP_571233.1 UniGene:Dr.8070
ProteinModelPortal:Q9PTU1 Ensembl:ENSDART00000022441 GeneID:30394
KEGG:dre:30394 CTD:30394 HOGENOM:HOG000112172 HOVERGEN:HBG005454
InParanoid:Q9PTU1 NextBio:20806805 Bgee:Q9PTU1 GO:GO:0021515
Uniprot:Q9PTU1
Length = 314
Score = 119 (46.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 25 SQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAE-QAELLEMHF 83
S ++P+ P+ +VP G S P + K R + +R + ++ Q + LE F
Sbjct: 146 SSYFPA----PSSVVPIPGTFSWPLAARGKPR-------RGMLRRAVFSDVQRKALEKMF 194
Query: 84 GNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKT 143
+ + + KLAA+LGL QV +WFQNRR + + K E ++ E + KT
Sbjct: 195 QKQKYISKPDRKKLAAKLGLKDSQVKIWFQNRRMKWRNSKERELLSS-GGCREQTLPTKT 253
Query: 144 RLESEVATLKEKLSVAEKE 162
+++ + +K S E E
Sbjct: 254 NPHPDLSDVGKKSSEDEDE 272
>UNIPROTKB|P50221 [details] [associations]
symbol:MEOX1 "Homeobox protein MOX-1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001757 "somite specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0071837 "HMG box domain
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0007275 "multicellular organismal development" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH471178 GO:GO:0001757 EMBL:AC068675 EMBL:U10492 EMBL:U10493
EMBL:AC004149 EMBL:BC069474 EMBL:BC069506 IPI:IPI00030728
PIR:I38034 RefSeq:NP_001035091.1 RefSeq:NP_004518.1
RefSeq:NP_054705.1 UniGene:Hs.438 ProteinModelPortal:P50221
SMR:P50221 IntAct:P50221 MINT:MINT-202809 STRING:P50221
DMDM:1709078 PRIDE:P50221 DNASU:4222 Ensembl:ENST00000318579
Ensembl:ENST00000329168 GeneID:4222 KEGG:hsa:4222 UCSC:uc002idz.3
CTD:4222 GeneCards:GC17M041728 HGNC:HGNC:7013 HPA:HPA045214
MIM:600147 neXtProt:NX_P50221 PharmGKB:PA30747 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 InParanoid:P50221 KO:K09322
OMA:QPPAPVW OrthoDB:EOG46DM3J PhylomeDB:P50221 GenomeRNAi:4222
NextBio:16659 ArrayExpress:P50221 Bgee:P50221 CleanEx:HS_MEOX1
Genevestigator:P50221 GermOnline:ENSG00000005102 Uniprot:P50221
Length = 254
Score = 117 (46.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 34/101 (33%), Positives = 46/101 (45%)
Query: 29 PSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGN-----GGFRALKKRK-LTAEQAELLEMH 82
P D G + E +RR+ + N G +A K+R T EQ LE
Sbjct: 130 PGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQLRELEAE 189
Query: 83 FGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
F + + L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 190 FAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWKRVK 230
>UNIPROTKB|F1RL72 [details] [associations]
symbol:LOC100626834 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 EMBL:FP102406 RefSeq:XP_003354410.1
Ensembl:ENSSSCT00000015792 GeneID:100626834 KEGG:ssc:100626834
OMA:RRTPYEM Uniprot:F1RL72
Length = 263
Score = 117 (46.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 33/90 (36%), Positives = 44/90 (48%)
Query: 34 TPTGIVPQQGEPSKPKRRQRKRNTNGNGG-FRALKKRKL--TAEQAELLEMHFGNEHKLE 90
TP Q+ P + RR + G G R K ++ T Q LE F +
Sbjct: 119 TPPSPGAQRRTPYEWMRRSVAAGSGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 178
Query: 91 SDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 179 IRRKSELAANLGLTERQVKIWFQNRRAKER 208
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 62 GFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAEL----GLDPRQVAVWFQNRRA 117
GF + K + T EQ E LE + K S R+ +L E ++PRQ+ VWFQNRR
Sbjct: 16 GFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRC 75
Query: 118 RDKTKK----IEETYATLKTAHENVVVEKTRLESEVATL 152
R+K +K ++ L ++ ++ E RL+ +V+ L
Sbjct: 76 REKQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNL 114
>UNIPROTKB|J9P7F8 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010974
Ensembl:ENSCAFT00000046319 OMA:WAPAEEL Uniprot:J9P7F8
Length = 123
Score = 99 (39.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 74 EQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKTKKIE 125
+Q E LE F +H L ++ +LAA L L QV +WFQNRR + K ++++
Sbjct: 39 KQLEELENVFTKQHNLVGKKRAQLAARLNLTENQVRIWFQNRRVKYQKQQRLK 91
>UNIPROTKB|A5D7C5 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:DAAA02009993 EMBL:DAAA02009994 EMBL:DAAA02009995 EMBL:BC140506
IPI:IPI00711174 RefSeq:NP_001091514.1 UniGene:Bt.63482 SMR:A5D7C5
Ensembl:ENSBTAT00000004198 GeneID:518540 KEGG:bta:518540
InParanoid:A5D7C5 NextBio:20872676 Uniprot:A5D7C5
Length = 303
Score = 118 (46.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 47/146 (32%), Positives = 72/146 (49%)
Query: 19 SNMVLLSQFYPSDVLTPTGIVPQQG-EPSKPKRR---QRKRNTNGN--GGFRA---LKKR 69
SN L P+ P G +Q P++ ++R +RK +++ + G +++ K R
Sbjct: 128 SNSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGSKRKSDSSDSQEGNYKSEVNSKPR 187
Query: 70 K----LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
K T EQ LE F + + L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 188 KERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGG 247
Query: 126 ETYATLKTAHENVVVEK-TRLESEVA 150
+ A + E V V+K T L SE++
Sbjct: 248 QQGAAAREK-ELVNVKKGTLLPSELS 272
>UNIPROTKB|F1SEJ3 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:DHTLFGC EMBL:FP565218
RefSeq:XP_003482725.1 Ensembl:ENSSSCT00000016732 GeneID:100736898
KEGG:ssc:100736898 Uniprot:F1SEJ3
Length = 303
Score = 118 (46.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 47/146 (32%), Positives = 72/146 (49%)
Query: 19 SNMVLLSQFYPSDVLTPTGIVPQQG-EPSKPKRR---QRKRNTNGN--GGFRA---LKKR 69
SN L P+ P G +Q P++ ++R +RK +++ + G +++ K R
Sbjct: 128 SNSSSLGSSTPTGAACPPGDYGRQALSPAEAEKRSGGKRKSDSSDSQEGNYKSEVNSKPR 187
Query: 70 K----LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
K T EQ LE F + + L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 188 KERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGG 247
Query: 126 ETYATLKTAHENVVVEK-TRLESEVA 150
+ A + E V V+K T L SE++
Sbjct: 248 QQGAAAREK-ELVNVKKGTLLPSELS 272
>WB|WBGene00011069 [details] [associations]
symbol:ceh-62 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00680000099870 EMBL:Z46794 PIR:T23977
RefSeq:NP_496326.1 ProteinModelPortal:Q09602 SMR:Q09602
EnsemblMetazoa:R06F6.6 GeneID:187642 KEGG:cel:CELE_R06F6.6
UCSC:R06F6.6 CTD:187642 WormBase:R06F6.6 eggNOG:NOG286296
InParanoid:Q09602 OMA:DSYMARE NextBio:935974 Uniprot:Q09602
Length = 416
Score = 120 (47.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 26 QFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGN 85
Q P+ +TPT I+ P +P+ Q N K+ + EQA LE +
Sbjct: 97 QLLPA--MTPTPIIATPSIPEQPQPLQSPSAPNEKS---RRKRTTFSPEQATRLEAEYIG 151
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
+ + +++ LA L L QV WFQNRRA+DK + E
Sbjct: 152 DSYMAREKRHLLAQSLKLSENQVKTWFQNRRAKDKRDRKSE 192
>ZFIN|ZDB-GENE-030131-6376 [details] [associations]
symbol:nobox "NOBOX oogenesis homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-6376 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00650000093445 EMBL:CABZ01080703 EMBL:CABZ01080704
IPI:IPI00899590 Ensembl:ENSDART00000121436 Uniprot:E7EXP4
Length = 604
Score = 118 (46.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATL 131
+ +Q E LE F ++H + D++ ++AA +G+ P+++ VWFQNRRA K +K T ATL
Sbjct: 306 STDQLEELERVFQDDHYPDGDKRKEIAAAIGVTPQRIMVWFQNRRA--KWRKT--TKATL 361
Query: 132 K 132
K
Sbjct: 362 K 362
Score = 43 (20.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 175 LNNPSATIPTDMDTVDSPFTLDPFAGNLGWFDY 207
L+ P + P+ DT D+ F D ++ DY
Sbjct: 450 LDTPEHSEPSSADTTDTGFDYDGLGSSVK-LDY 481
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 119 (46.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYAT 130
+TA+Q E L+ + N K +++L++E GLD R V VWFQNRRA++K K +
Sbjct: 161 ITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQR 220
Query: 131 LKTAHENVVVEKTRLESEVATLKEKLSVAEKEIK-----KMSELIE--GI--SLNNPSAT 181
N+ + +S+ +++E+ ++ E+ MSE+ GI +L+ S
Sbjct: 221 WGQYFRNMKRSRGTSKSDKDSIQEEGPDSDAEVSFTDEPSMSEMSHSNGIYSNLSEASPA 280
Query: 182 IPTDMDTVDSPFTLDPFAGNLGWFDYEDL 210
+ T + F+LD +G Y DL
Sbjct: 281 LGRQAGT-NGGFSLD-HSGIPAQDQYHDL 307
>UNIPROTKB|P47902 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:U16360 EMBL:U15212 EMBL:U51095 EMBL:AF239666 EMBL:BC096251
IPI:IPI00790637 IPI:IPI00795021 PIR:I38868 PIR:I38881
RefSeq:NP_001795.2 UniGene:Hs.1545 ProteinModelPortal:P47902
SMR:P47902 MINT:MINT-6800278 STRING:P47902 PhosphoSite:P47902
DMDM:116241291 PRIDE:P47902 Ensembl:ENST00000231656 GeneID:1044
KEGG:hsa:1044 UCSC:uc003lrq.3 GeneCards:GC05P149526 HGNC:HGNC:1805
MIM:600746 neXtProt:NX_P47902 PharmGKB:PA26351 InParanoid:P47902
OMA:YSHVEPG PhylomeDB:P47902 GenomeRNAi:1044 NextBio:4377
ArrayExpress:P47902 Bgee:P47902 CleanEx:HS_CDX1
Genevestigator:P47902 GermOnline:ENSG00000113722 Uniprot:P47902
Length = 265
Score = 116 (45.9 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 33/90 (36%), Positives = 44/90 (48%)
Query: 34 TPTGIVPQQGEPSKPKRRQRKRNTNGNGG-FRALKKRKL--TAEQAELLEMHFGNEHKLE 90
TP+ Q+ P + RR G G R K ++ T Q LE F +
Sbjct: 121 TPSSPGAQRPTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYIT 180
Query: 91 SDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 181 IRRKSELAANLGLTERQVKIWFQNRRAKER 210
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 70 KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGL----DPRQVAVWFQNRRARDKTKK-- 123
+ TAEQ E LE + K S R+ +L E + +P+Q+ VWFQNRR RDK +K
Sbjct: 28 RYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQRKEA 87
Query: 124 --IEETYATLKTAHENVVVEKTRLESEVATL 152
++ L ++ ++ E RL+ +V+ L
Sbjct: 88 SRLQSVNRKLSAMNKLLMEENDRLQKQVSQL 118
>UNIPROTKB|F1NHF8 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 GO:GO:0000976 EMBL:AADN02013531
IPI:IPI00819450 Ensembl:ENSGALT00000039481 Uniprot:F1NHF8
Length = 60
Score = 98 (39.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LAA L L RQV +WFQNRRA+++
Sbjct: 9 TDHQRLELEKEFHYNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 57
>UNIPROTKB|J9P485 [details] [associations]
symbol:EMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03015567 EMBL:AAEX03015568
EMBL:AAEX03015569 Ensembl:ENSCAFT00000043720 Uniprot:J9P485
Length = 134
Score = 98 (39.6 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 68 KRKLTA-EQAELLEM-H-FGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
KR TA ++LL + H F H + + +LA L L QV VWFQNRR + K +K+
Sbjct: 37 KRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKL 96
Query: 125 EE 126
EE
Sbjct: 97 EE 98
>MGI|MGI:97347 [details] [associations]
symbol:Nkx2-2 "NK2 transcription factor related, locus 2
(Drosophila)" species:10090 "Mus musculus" [GO:0001159 "core
promoter proximal region DNA binding" evidence=IDA] [GO:0003323
"type B pancreatic cell development" evidence=IDA;IMP] [GO:0003326
"pancreatic A cell fate commitment" evidence=IGI;IMP] [GO:0003327
"type B pancreatic cell fate commitment" evidence=IMP] [GO:0003329
"pancreatic PP cell fate commitment" evidence=IGI] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007224 "smoothened signaling pathway" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0014003
"oligodendrocyte development" evidence=IMP] [GO:0021522 "spinal
cord motor neuron differentiation" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation"
evidence=IGI;IMP] [GO:0021530 "spinal cord oligodendrocyte cell
fate specification" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048468 "cell
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048665 "neuron fate specification"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0060580 "ventral spinal cord interneuron fate
determination" evidence=IMP] Reactome:REACT_13641
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97347 GO:GO:0005654 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0003713 GO:GO:0021522 GO:GO:0048714
GO:GO:0045666 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 CTD:4821 KO:K08029
GO:GO:0003327 GO:GO:0060580 EMBL:U31566 EMBL:S83259 IPI:IPI00117502
PIR:JC4634 RefSeq:NP_035049.1 UniGene:Mm.330639
ProteinModelPortal:P42586 SMR:P42586 STRING:P42586 PRIDE:P42586
Ensembl:ENSMUST00000067075 GeneID:18088 KEGG:mmu:18088
InParanoid:P42586 NextBio:293225 Bgee:P42586 Genevestigator:P42586
GermOnline:ENSMUSG00000027434 Uniprot:P42586
Length = 273
Score = 116 (45.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|J9NSM7 [details] [associations]
symbol:EN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03011883
Ensembl:ENSCAFT00000048402 OMA:IGPAHRE Uniprot:J9NSM7
Length = 194
Score = 112 (44.5 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 89 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 146
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 147 SQIKIWFQNKRAKIK 161
>UNIPROTKB|K7GKV4 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:FP245529 RefSeq:XP_003360417.1
Ensembl:ENSSSCT00000034899 GeneID:100623433 Uniprot:K7GKV4
Length = 284
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 36/104 (34%), Positives = 48/104 (46%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGN 85
+P D T P + S P RK G R +K ++ T Q LE F
Sbjct: 137 FPVDACTADASSPSRSRHS-PYAWMRK-TVQVTGKTRTKEKYRVVYTDHQRLELEKEFHC 194
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
+ RK +LA LGL RQV +WFQNRRA+++ KKI +
Sbjct: 195 NRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQ 238
>UNIPROTKB|F1MD21 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 IPI:IPI00689409 UniGene:Bt.111374
OMA:NCGSGLN GO:GO:0021658 EMBL:DAAA02010939
Ensembl:ENSBTAT00000010699 Uniprot:F1MD21
Length = 372
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 32 VLTPTGIVPQQGEPSKPKRRQRKRNTNGNGG-FRALKKRKLTAEQAEL-LEMHFGNEHKL 89
VL P G P+ ++ +G+GG R L+ + EL E HF N++ L
Sbjct: 108 VLPPASAASATG-PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHF-NKY-L 164
Query: 90 ESDRKDKLAAELGLDPRQVAVWFQNRRARDKT----KKIEETYATLKTAHENVVVEKTRL 145
R+ ++AA L L RQV VWFQNRR + K K+ + + K+ ++ V++
Sbjct: 165 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVDED-- 222
Query: 146 ESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGN 201
E E + ++ LSV+ +++ + +L+ A+ + D+ F + P N
Sbjct: 223 EEEKSLFEQALSVSGALLEREGYTFQQNALSQQQASNGHNGDS--QSFPVSPLTSN 276
>UNIPROTKB|Q0VCS4 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
eggNOG:NOG321520 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT EMBL:BC120030 IPI:IPI00689409
RefSeq:NP_001069322.1 UniGene:Bt.111374 ProteinModelPortal:Q0VCS4
SMR:Q0VCS4 PRIDE:Q0VCS4 GeneID:524150 KEGG:bta:524150 CTD:3199
InParanoid:Q0VCS4 NextBio:20873901 Uniprot:Q0VCS4
Length = 372
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 32 VLTPTGIVPQQGEPSKPKRRQRKRNTNGNGG-FRALKKRKLTAEQAEL-LEMHFGNEHKL 89
VL P G P+ ++ +G+GG R L+ + EL E HF N++ L
Sbjct: 108 VLPPASAASATG-PACLSHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHF-NKY-L 164
Query: 90 ESDRKDKLAAELGLDPRQVAVWFQNRRARDKT----KKIEETYATLKTAHENVVVEKTRL 145
R+ ++AA L L RQV VWFQNRR + K K+ + + K+ ++ V++
Sbjct: 165 CRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKSLEDSEKVDED-- 222
Query: 146 ESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDPFAGN 201
E E + ++ LSV+ +++ + +L+ A+ + D+ F + P N
Sbjct: 223 EEEKSLFEQALSVSGALLEREGYTFQQNALSQQQASNGYNGDS--QSFPVSPLTSN 276
>RGD|1563929 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10116 "Rattus
norvegicus" [GO:0001541 "ovarian follicle development"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
RGD:1563929 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001541 EMBL:CH473959
CTD:135935 GeneTree:ENSGT00650000093445 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 IPI:IPI00394115 RefSeq:NP_001178942.1
UniGene:Rn.228183 Ensembl:ENSRNOT00000029651 GeneID:502759
KEGG:rno:502759 UCSC:RGD:1563929 NextBio:712378 Uniprot:D3ZXL8
Length = 524
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 49 KRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQV 108
+R +K FR + ++Q E LE F +H +SD++ ++A +G+ P+++
Sbjct: 120 ERDLKKEPLEATCQFRKKTRTLYRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRI 179
Query: 109 AVWFQNRRAR-DKTKKIEE 126
VWFQNRRA+ K +K+ E
Sbjct: 180 MVWFQNRRAKWRKVEKLNE 198
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 15 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 73
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 74 REELSQRLGLSEARVQVWFQNRRAK 98
>WB|WBGene00000437 [details] [associations]
symbol:ceh-13 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0040007
GO:GO:0007411 GO:GO:0002119 GO:GO:0043565 GO:GO:0016358
GO:GO:0010171 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009790
GO:GO:0016337 GO:GO:0007413 GeneTree:ENSGT00700000104189
EMBL:X17077 EMBL:FO080424 PIR:S09505 RefSeq:NP_498655.1
ProteinModelPortal:P17488 SMR:P17488 STRING:P17488
EnsemblMetazoa:R13A5.5 GeneID:176069 KEGG:cel:CELE_R13A5.5
UCSC:R13A5.5 CTD:176069 WormBase:R13A5.5 eggNOG:NOG236971
HOGENOM:HOG000018801 InParanoid:P17488 KO:K09301 OMA:QHNTYKW
NextBio:890976 Uniprot:P17488
Length = 202
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 34/111 (30%), Positives = 49/111 (44%)
Query: 35 PTGIVPQQGEPSK---PKRRQR-----KRNTNGNGGFRALKKRKLTAEQAELLEMHFGNE 86
PTG+ Q K KR QR K+ + NG R T Q LE F
Sbjct: 81 PTGVTASQHNTYKWMHTKRSQRPAAPKKKVIDENGTNRT----NFTTHQLTELEKEFHTA 136
Query: 87 HKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHEN 137
+ R+ ++A+ L L QV +WFQNRR ++K ++ E+ + T N
Sbjct: 137 KYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKREKEKAFLARNTWESN 187
>UNIPROTKB|A2VDR0 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:DAAA02049232 EMBL:BC133359 IPI:IPI00702466
RefSeq:NP_001030453.2 UniGene:Bt.65876 SMR:A2VDR0
Ensembl:ENSBTAT00000054676 GeneID:529059 KEGG:bta:529059
InParanoid:A2VDR0 NextBio:20874954 Uniprot:A2VDR0
Length = 254
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 44 EPSKPKRRQRKRNTNGN-------GGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKD 95
E K R++K N++ G +A K+R T EQ LE F + + L R+
Sbjct: 143 ETEKKSTRRKKENSDNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRY 202
Query: 96 KLAAELGLDPRQVAVWFQNRRARDKTKK 123
++A L L RQV VWFQNRR + K K
Sbjct: 203 EIAVNLDLSERQVKVWFQNRRMKWKRVK 230
>UNIPROTKB|I3L5H5 [details] [associations]
symbol:LOC100623433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ EMBL:FP245529
Ensembl:ENSSSCT00000030959 Uniprot:I3L5H5
Length = 286
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKR-NTNGNGGFRALKKRKL--TAEQAELLEMHFG 84
+P D T P + S P RK G R +K ++ T Q LE F
Sbjct: 137 FPVDACTADASSPSRSRHS-PYAWMRKTVQVTVTGKTRTKEKYRVVYTDHQRLELEKEFH 195
Query: 85 NEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
+ RK +LA LGL RQV +WFQNRRA+++ KKI +
Sbjct: 196 CNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQ 240
>UNIPROTKB|H9L184 [details] [associations]
symbol:Gga.48067 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0002011
"morphogenesis of an epithelial sheet" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048539 "bone marrow development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0060216
"definitive hemopoiesis" evidence=IEA] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA] [GO:2000738 "positive
regulation of stem cell differentiation" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02014570
Ensembl:ENSGALT00000029853 OMA:MANTIPP Uniprot:H9L184
Length = 102
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 56 NTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNR 115
N N +GG + T +Q LE F L R+ ++A L L RQ+ +WFQNR
Sbjct: 2 NPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNR 61
Query: 116 RAR-DKTKKIEET 127
R + K K+ T
Sbjct: 62 RMKWKKDHKLPNT 74
>UNIPROTKB|Q02814 [details] [associations]
symbol:CHOX-CAD2 "Homeobox protein CHOX-CAD2" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG291290 OrthoDB:EOG42FSK7
EMBL:L06621 IPI:IPI00576916 PIR:PC1228 ProteinModelPortal:Q02814
SMR:Q02814 InParanoid:Q02814 Uniprot:Q02814
Length = 60
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
T Q LE F + RK +LA LGL RQV WFQNRRA+++
Sbjct: 9 TDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKSWFQNRRAKER 57
>UNIPROTKB|Q90789 [details] [associations]
symbol:Cnot "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0030903 "notochord development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099625 HOVERGEN:HBG016849 OrthoDB:EOG48GW4Q
HSSP:P14653 eggNOG:NOG249605 EMBL:AADN02049007 EMBL:X82575
IPI:IPI00679844 PIR:I50622 UniGene:Gga.677
Ensembl:ENSGALT00000037091 HOGENOM:HOG000202447 InParanoid:Q90789
Uniprot:Q90789
Length = 111
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 74 EQAELLEMHF-GNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATL 131
EQ E LE F ++ + ++R D LAA L L QV VWFQNRR + + + +E+ A L
Sbjct: 26 EQLERLEQEFLKQQYMVGTERVD-LAATLRLTETQVKVWFQNRRIKWRKQSMEQKKAKL 83
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 96 (38.9 bits), Expect = 0.00015, P = 0.00015
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 64 RALKKRK--LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR 118
R L++ + T EQ E LE F H + +++LAA++ L ++ VWF NRRA+
Sbjct: 7 RKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAK 63
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 65 ALKKR--KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTK 122
A KKR + TA Q + +E F ++ + +L+ +LGL P QV WFQN+R + K +
Sbjct: 87 AKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQ 146
Query: 123 KIEETYATLKTAHENVVVEKTRLESEV-----ATLKEKLSVAEKEIKKMSELIEGI-SLN 176
+ A LK +E + E ++S +T L + +++ + + I S+
Sbjct: 147 QSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSIVSMR 206
Query: 177 NPS 179
NPS
Sbjct: 207 NPS 209
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 167 SELIEGISLNNPSATIPTDMDTVDSPFTLD 196
S+ +EG S+++PS + + + S T +
Sbjct: 649 SDGVEGSSVSSPSCLLTVAIQVLGSNVTTE 678
>UNIPROTKB|Q9YI38 [details] [associations]
symbol:GGMOXr1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00660000095141 CTD:4222 eggNOG:NOG282563
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 OMA:QPPAPVW
OrthoDB:EOG46DM3J EMBL:AADN02070145 EMBL:AF043432 IPI:IPI00581083
RefSeq:NP_990096.1 UniGene:Gga.288 SMR:Q9YI38
Ensembl:ENSGALT00000001806 GeneID:395533 KEGG:gga:395533
InParanoid:Q9YI38 NextBio:20815610 Uniprot:Q9YI38
Length = 240
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 19 SNMVLLSQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRK-LTAEQAE 77
S V +S+ Y V + + + K + ++ G R+ K+R T EQ
Sbjct: 111 STAVAVSEDYKVPVNSGMETERKASKRKKEHSESQPSSSKAEGSSRSRKERTAFTKEQLR 170
Query: 78 LLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
LE F + + L R+ ++A L L RQV VWFQNRR + K K
Sbjct: 171 ELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVK 216
>UNIPROTKB|F1NM26 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00660000095141 OMA:DHTLFGC
EMBL:AADN02000860 EMBL:AADN02000861 EMBL:AADN02000862
EMBL:AADN02000863 EMBL:AADN02000864 IPI:IPI00604288
Ensembl:ENSGALT00000017555 ArrayExpress:F1NM26 Uniprot:F1NM26
Length = 302
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRK-LTAEQAELLEMHFGNE 86
Y L+P + G+ ++ N + K+R T EQ LE F +
Sbjct: 148 YGRQALSPVETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHH 207
Query: 87 HKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TRL 145
+ L R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T L
Sbjct: 208 NYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTLL 266
Query: 146 ESEVA 150
SE++
Sbjct: 267 PSELS 271
>MGI|MGI:103219 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001757
"somite specification" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0060021 "palate development" evidence=IMP] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:103219 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 KO:K09322 CTD:4223 OMA:DHTLFGC OrthoDB:EOG4PZJ7H
EMBL:Z16406 EMBL:AK028352 EMBL:AK031152 EMBL:AK142690 EMBL:S79168
IPI:IPI00108444 PIR:B49122 RefSeq:NP_032610.1 UniGene:Mm.341398
ProteinModelPortal:P32443 SMR:P32443 STRING:P32443
PhosphoSite:P32443 PRIDE:P32443 Ensembl:ENSMUST00000041183
GeneID:17286 KEGG:mmu:17286 UCSC:uc007nkf.1 InParanoid:P32443
NextBio:291796 Bgee:P32443 CleanEx:MM_MEOX2 Genevestigator:P32443
GermOnline:ENSMUSG00000036144 Uniprot:P32443
Length = 303
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 40/126 (31%), Positives = 57/126 (45%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKR-NTNGNGGFRALKKRK-LTAEQAELLEMHFGN 85
Y L+P + + G K + N + K+R T EQ LE F +
Sbjct: 148 YGRQALSPADVEKRSGSKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAH 207
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TR 144
+ L R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T
Sbjct: 208 HNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTL 266
Query: 145 LESEVA 150
L SE++
Sbjct: 267 LPSELS 272
>UNIPROTKB|F1NPY3 [details] [associations]
symbol:F1NPY3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00650000093445 EMBL:AADN02065142 EMBL:AADN02065141
IPI:IPI00584945 Ensembl:ENSGALT00000030041 OMA:GMIASCE
Uniprot:F1NPY3
Length = 204
Score = 111 (44.1 bits), Expect = 0.00016, P = 0.00016
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 66 LKKRKLT---AEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKT 121
+KK+ T AEQ E LE F + +++++ ++AA +G+ P+++ VWFQNRRA+ KT
Sbjct: 8 VKKKTRTFYSAEQLEELEKVFQEDRYPDNEKRREIAAVIGVTPQRIMVWFQNRRAKWRKT 67
Query: 122 KK 123
+K
Sbjct: 68 EK 69
>UNIPROTKB|E1BBE1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:DAAA02035818 IPI:IPI00694388
RefSeq:NP_001179638.1 UniGene:Bt.48094 Ensembl:ENSBTAT00000013574
GeneID:531695 KEGG:bta:531695 NextBio:20875510 Uniprot:E1BBE1
Length = 273
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|E2RNP4 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580
"ventral spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 CTD:4821 KO:K08029 OMA:GKPCHTL GO:GO:0003327
GO:GO:0060580 EMBL:AAEX03013746 RefSeq:XP_542867.2
ProteinModelPortal:E2RNP4 Ensembl:ENSCAFT00000008335 GeneID:485744
KEGG:cfa:485744 NextBio:20859672 Uniprot:E2RNP4
Length = 273
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|O95096 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048565 "digestive tract
development" evidence=IEA] [GO:0048665 "neuron fate specification"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0060580 "ventral spinal cord
interneuron fate determination" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0007420 "brain development" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0031018 "endocrine
pancreas development" evidence=TAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 Reactome:REACT_111045 GO:GO:0005654
GO:GO:0007420 GO:GO:0051091 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0031018 GO:GO:0048565 GO:GO:0007224 GO:GO:0048665
GO:GO:0014003 GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
eggNOG:NOG310976 HOGENOM:HOG000231923 GO:GO:0001159
HOVERGEN:HBG006689 GO:GO:0003326 GO:GO:0003329 EMBL:AF019415
EMBL:AF019414 EMBL:AL133325 EMBL:BC075092 EMBL:BC075093
IPI:IPI00028339 RefSeq:NP_002500.1 UniGene:Hs.516922
ProteinModelPortal:O95096 SMR:O95096 STRING:O95096 PRIDE:O95096
DNASU:4821 Ensembl:ENST00000377142 GeneID:4821 KEGG:hsa:4821
UCSC:uc002wsi.3 CTD:4821 GeneCards:GC20M021491 HGNC:HGNC:7835
HPA:HPA003468 MIM:604612 neXtProt:NX_O95096 PharmGKB:PA31642
InParanoid:O95096 KO:K08029 OMA:GKPCHTL OrthoDB:EOG4Z36FJ
PhylomeDB:O95096 ChiTaRS:NKX2-2 GenomeRNAi:4821 NextBio:18576
Bgee:O95096 CleanEx:HS_NKX2-2 Genevestigator:O95096
GermOnline:ENSG00000125820 GO:GO:0003327 GO:GO:0060580
Uniprot:O95096
Length = 273
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|I3LQZ1 [details] [associations]
symbol:NKX2-2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060580 "ventral
spinal cord interneuron fate determination" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IEA]
[GO:0048708 "astrocyte differentiation" evidence=IEA] [GO:0048665
"neuron fate specification" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021530 "spinal cord oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003329 "pancreatic PP cell fate commitment" evidence=IEA]
[GO:0003327 "type B pancreatic cell fate commitment" evidence=IEA]
[GO:0003326 "pancreatic A cell fate commitment" evidence=IEA]
[GO:0003323 "type B pancreatic cell development" evidence=IEA]
[GO:0001159 "core promoter proximal region DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0003713 GO:GO:0021522 GO:GO:0048714 GO:GO:0045666
GO:GO:0048565 GO:GO:0007224 GO:GO:0048665 GO:GO:0014003
GO:GO:0021530 GO:GO:0003323 GO:GO:0048708
GeneTree:ENSGT00700000104098 GO:GO:0001159 GO:GO:0003326
GO:GO:0003329 KO:K08029 OMA:GKPCHTL GO:GO:0003327 GO:GO:0060580
EMBL:FP565164 RefSeq:XP_003359963.1 Ensembl:ENSSSCT00000025131
GeneID:100626520 KEGG:ssc:100626520 Uniprot:I3LQZ1
Length = 273
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|P43697 [details] [associations]
symbol:NKX2-2 "Homeobox protein Nkx-2.2" species:10036
"Mesocricetus auratus" [GO:0001159 "core promoter proximal region
DNA binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0051091 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003713
GO:GO:0001159 HOVERGEN:HBG006689 EMBL:X81408 PIR:I48187
ProteinModelPortal:P43697 SMR:P43697 Uniprot:P43697
Length = 273
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T G GG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 105 EPSADESPDNDKETPGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 164
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 165 IRLTPTQVKIWFQNHRYKMKRARAEK 190
>UNIPROTKB|F1MMA8 [details] [associations]
symbol:LOC506388 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:CCEAPKK EMBL:DAAA02013790 IPI:IPI00686698
Ensembl:ENSBTAT00000010095 Uniprot:F1MMA8
Length = 246
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 30 SDVLTPTGIVPQ---QGEPSK--PKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFG 84
SDV+ P G Q Q + P+R Q+ + G G R L+ T EQ + LE F
Sbjct: 34 SDVVKPEGASGQGTRQATAADFGPERPQQDQPKEGKKGKRRLRTT-FTTEQLQELEKVFH 92
Query: 85 NEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEET 127
H + +++LAA + L +V +WFQN+RA K +K E+T
Sbjct: 93 FTHYPDIHVRNQLAARINLPEARVQIWFQNQRA--KWRKQEKT 133
>UNIPROTKB|E2R5Y1 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:AAEX03009390 RefSeq:XP_851905.1
Ensembl:ENSCAFT00000004713 GeneID:609592 KEGG:cfa:609592
NextBio:20895182 Uniprot:E2R5Y1
Length = 374
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 139 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 196
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K+ ++ VE+ E E + ++ LSV+ +++ + +L
Sbjct: 197 KRQTQCKENQNSEGKFKSLEDSEKVEED--EEEKSLFEQALSVSGALLEREGYTFQQNAL 254
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 255 SQQQA--PNGHNGDSQSFPVSPLTSN 278
>UNIPROTKB|F1PS13 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060711
"labyrinthine layer development" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000122
GO:GO:0001568 GO:GO:0000976 GO:GO:0060711 OMA:FQPIEIQ
EMBL:AAEX03026515 Ensembl:ENSCAFT00000027221 Uniprot:F1PS13
Length = 284
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 37/104 (35%), Positives = 48/104 (46%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGN 85
+P D P + S P RK G R +K ++ T Q LE F
Sbjct: 137 FPIDAEAADASSPNRSRHS-PSAWMRK-TLQVTGKTRTKEKYRVVYTDHQRLELEKEFHC 194
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD-KT--KKIEE 126
+ RK +LA LGL RQV +WFQNRRA++ KT KKI +
Sbjct: 195 NRYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKTIKKKISQ 238
>RGD|1561842 [details] [associations]
symbol:En2 "engrailed homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0030901 "midbrain
development" evidence=IEA;ISO] [GO:0030902 "hindbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048666
"neuron development" evidence=IEA;ISO] InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1561842 GO:GO:0005634 GO:GO:0016020 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
GO:GO:0030902 GeneTree:ENSGT00680000099870 PROSITE:PS00033
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
OrthoDB:EOG4H72D0 CTD:2020 OMA:HRVTNFF EMBL:CH474057
IPI:IPI00192500 RefSeq:NP_001102684.1 UniGene:Rn.156472
Ensembl:ENSRNOT00000008951 GeneID:499964 KEGG:rno:499964
NextBio:704582 Uniprot:D3Z8B1
Length = 323
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 216 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 274
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 275 ESQIKIWFQNKRAKIK 290
>MGI|MGI:95390 [details] [associations]
symbol:En2 "engrailed 2" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0030182 "neuron
differentiation" evidence=IGI] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0030902 "hindbrain development" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048666 "neuron
development" evidence=IGI] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:95390
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048666 GO:GO:0030901 GO:GO:0030902 eggNOG:NOG306728
PROSITE:PS00033 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319
OrthoDB:EOG4H72D0 CTD:2020 OMA:HRVTNFF EMBL:L12704 EMBL:L12705
EMBL:Y00203 IPI:IPI00132513 PIR:D48423 RefSeq:NP_034264.1
UniGene:Mm.4298 ProteinModelPortal:P09066 SMR:P09066 STRING:P09066
PhosphoSite:P09066 PaxDb:P09066 PRIDE:P09066 DNASU:13799
Ensembl:ENSMUST00000036177 GeneID:13799 KEGG:mmu:13799
InParanoid:P09066 NextBio:284554 Bgee:P09066 CleanEx:MM_EN2
Genevestigator:P09066 GermOnline:ENSMUSG00000039095 Uniprot:P09066
Length = 324
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 217 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 275
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 276 ESQIKIWFQNKRAKIK 291
>UNIPROTKB|F1SHT0 [details] [associations]
symbol:HOXA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=IEA] [GO:0021568
"rhombomere 2 development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0007379
"segment specification" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 OMA:NCGSGLN GO:GO:0021658
EMBL:CU570959 RefSeq:XP_003134891.1 Ensembl:ENSSSCT00000018187
GeneID:100519993 KEGG:ssc:100519993 Uniprot:F1SHT0
Length = 380
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 145 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 202
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K+ ++ VE+ E E + ++ LSV+ +++ + +L
Sbjct: 203 KRQTQCKENQNSEGKFKSLEDSEKVEED--EEEKSLFEQALSVSGALLEREGYTFQQNAL 260
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 261 SQQQA--PNGHNGDSQSFPVSPLTSN 284
>UNIPROTKB|F1PG21 [details] [associations]
symbol:EN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00680000099870 PROSITE:PS00033 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 EMBL:AAEX03010308 EMBL:AAEX03010309
EMBL:AAEX03010310 Ensembl:ENSCAFT00000008172 OMA:GAKKGSD
Uniprot:F1PG21
Length = 327
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 220 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 278
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 279 ESQIKIWFQNKRAKIK 294
>UNIPROTKB|H0YJ33 [details] [associations]
symbol:CDX2 "Homeobox protein CDX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AL591024 HGNC:HGNC:1806 Ensembl:ENST00000548877
Uniprot:H0YJ33
Length = 156
Score = 105 (42.0 bits), Expect = 0.00019, P = 0.00019
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
T Q LE F + RK +LAA LGL RQV +WFQNRRA+++ KK+++
Sbjct: 37 TDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERKINKKKLQQ 94
>UNIPROTKB|P19622 [details] [associations]
symbol:EN2 "Homeobox protein engrailed-2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=TAS]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666
GO:GO:0030901 GO:GO:0030902 Orphanet:106 EMBL:CH236954
eggNOG:NOG306728 PROSITE:PS00033 HOVERGEN:HBG005975
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525
HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0 CTD:2020
EMBL:L12701 EMBL:L12700 EMBL:AC008060 EMBL:BC104970 EMBL:BC104972
EMBL:J03066 IPI:IPI00020031 PIR:E48423 RefSeq:NP_001418.2
UniGene:Hs.134989 ProteinModelPortal:P19622 SMR:P19622
STRING:P19622 PhosphoSite:P19622 DMDM:21903415 PRIDE:P19622
Ensembl:ENST00000297375 GeneID:2020 KEGG:hsa:2020 UCSC:uc003wmb.3
GeneCards:GC07P155250 HGNC:HGNC:3343 HPA:CAB025088 MIM:131310
neXtProt:NX_P19622 PharmGKB:PA27780 InParanoid:P19622 OMA:HRVTNFF
PhylomeDB:P19622 GenomeRNAi:2020 NextBio:8185 Bgee:P19622
CleanEx:HS_EN2 Genevestigator:P19622 GermOnline:ENSG00000164778
Uniprot:P19622
Length = 333
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 226 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 284
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 285 ESQIKIWFQNKRAKIK 300
>SGD|S000000694 [details] [associations]
symbol:HMRA1 "Silenced copy of a1 at HMR" species:4932
"Saccharomyces cerevisiae" [GO:0007532 "regulation of mating-type
specific transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 SGD:S000000694 GO:GO:0005634 GO:GO:0003714
GO:GO:0043565 EMBL:X59720 EMBL:BK006937 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 PIR:A90983 RefSeq:NP_010021.1
ProteinModelPortal:P0CY11 SMR:P0CY11 IntAct:P0CY11
EnsemblFungi:YCR097W GeneID:850459 KEGG:sce:YCR097W CYGD:YCR097w
KO:K09358 NextBio:966093 ArrayExpress:P0CY11 GermOnline:YCR097W
GO:GO:0007532 Uniprot:P0CY11
Length = 126
Score = 95 (38.5 bits), Expect = 0.00019, P = 0.00019
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 68 KRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
K ++ + LE F + L S K+++A + G+ P QV VWF N+R R K
Sbjct: 74 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 126
>UNIPROTKB|I3L684 [details] [associations]
symbol:LOC100626275 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR006820 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 KO:K09312 OMA:YSHVEPG EMBL:CU914366
RefSeq:XP_003354406.1 Ensembl:ENSSSCT00000031753 GeneID:100626275
KEGG:ssc:100626275 Uniprot:I3L684
Length = 263
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 41 QQGEPSKPKRRQRKRNTNGNGG-FRALKKRKL--TAEQAELLEMHFGNEHKLESDRKDKL 97
Q+ P + RR + G G R K ++ T Q LE F + RK +L
Sbjct: 126 QRRTPYEWMRRSVAAGSGGGSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSEL 185
Query: 98 AAELGLDPRQVAVWFQNRRARDK 120
AA LGL RQV +WFQNRRA+++
Sbjct: 186 AANLGLTERQVKIWFQNRRAKER 208
>UNIPROTKB|F1SHU5 [details] [associations]
symbol:EN2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901
GO:GO:0030902 GeneTree:ENSGT00680000099870 PROSITE:PS00033
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
OMA:HRVTNFF EMBL:CU856209 RefSeq:XP_003134575.1
Ensembl:ENSSSCT00000017879 GeneID:100512078 KEGG:ssc:100512078
ArrayExpress:F1SHU5 Uniprot:F1SHU5
Length = 342
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS R ++ + N N + + TAEQ + L+ F L R+ LA EL L+
Sbjct: 235 PSSGPRSRKPKKKNPNKEDKR-PRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLN 293
Query: 105 PRQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 294 ESQIKIWFQNKRAKIK 309
>RGD|3079 [details] [associations]
symbol:Meox2 "mesenchyme homeobox 2" species:10116 "Rattus
norvegicus" [GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001757
"somite specification" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0060021 "palate development" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 40/126 (31%), Positives = 57/126 (45%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKR-NTNGNGGFRALKKRK-LTAEQAELLEMHFGN 85
Y L+P + + G K + N + K+R T EQ LE F +
Sbjct: 148 YGRQALSPAEVEKRSGSKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAH 207
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TR 144
+ L R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T
Sbjct: 208 HNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTL 266
Query: 145 LESEVA 150
L SE++
Sbjct: 267 LPSELS 272
>UNIPROTKB|P39020 [details] [associations]
symbol:Meox2 "Homeobox protein MOX-2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3079 GO:GO:0005737 GO:GO:0016607
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519 GO:GO:0001757
HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322 CTD:4223
OrthoDB:EOG4PZJ7H EMBL:Z17223 IPI:IPI00210232 PIR:A48130
RefSeq:NP_058845.1 UniGene:Rn.34890 ProteinModelPortal:P39020
SMR:P39020 STRING:P39020 GeneID:29279 KEGG:rno:29279 UCSC:RGD:3079
InParanoid:P39020 NextBio:608651 Genevestigator:P39020
GermOnline:ENSRNOG00000006588 Uniprot:P39020
Length = 303
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 40/126 (31%), Positives = 57/126 (45%)
Query: 28 YPSDVLTPTGIVPQQGEPSKPKRRQRKR-NTNGNGGFRALKKRK-LTAEQAELLEMHFGN 85
Y L+P + + G K + N + K+R T EQ LE F +
Sbjct: 148 YGRQALSPAEVEKRSGSKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAH 207
Query: 86 EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TR 144
+ L R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T
Sbjct: 208 HNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTL 266
Query: 145 LESEVA 150
L SE++
Sbjct: 267 LPSELS 272
>ASPGD|ASPL0000048535 [details] [associations]
symbol:rfeB species:162425 "Emericella nidulans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:BN001307 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EnsemblFungi:CADANIAT00008677 HOGENOM:HOG000190495 OMA:TEDQQAS
Uniprot:C8VLD7
Length = 604
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS RR ++++T + K+++ T +Q LLEM F + ++++A E+ +
Sbjct: 44 PSTSARRPQRKSTLTQQQ-KNNKRQRATQDQLVLLEMEFNKNPTPTAATRERIAQEINMT 102
Query: 105 PRQVAVWFQNRRARDK--TKKIEET 127
R V +WFQNRRA+ K KK ET
Sbjct: 103 ERSVQIWFQNRRAKIKMLAKKSIET 127
>UNIPROTKB|P46692 [details] [associations]
symbol:CHOX-CAD1 "Homeobox protein CHOX-CAD" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
UniGene:Gga.210 HOVERGEN:HBG005302 EMBL:X57760 EMBL:X57761
IPI:IPI00582961 PIR:S16417 ProteinModelPortal:P46692 SMR:P46692
STRING:P46692 InParanoid:P46692 Uniprot:P46692
Length = 248
Score = 112 (44.5 bits), Expect = 0.00022, P = 0.00022
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 41 QQGEPSKPKRRQRKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGNEHKLESDRKDKLA 98
Q+ P + RR +T+ +G R K ++ T Q LE F + RK +LA
Sbjct: 113 QRRTPYEWMRRSIP-STSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA 171
Query: 99 AELGLDPRQVAVWFQNRRARDKT---KKIEE 126
A LGL RQV +WFQNRRA+++ KK+++
Sbjct: 172 AALGLTERQVKIWFQNRRAKERKVNKKKLQQ 202
>UNIPROTKB|I3L383 [details] [associations]
symbol:HOXB8 "Homeobox protein Hox-B8" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC103702 HGNC:HGNC:5119 Ensembl:ENST00000498634
Uniprot:I3L383
Length = 128
Score = 94 (38.1 bits), Expect = 0.00025, P = 0.00025
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 79 LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENV 138
LE F L R+ +++ LGL RQV +WFQNRR + K + ++ + + K E +
Sbjct: 10 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEEL 69
Query: 139 VVEKTRLE 146
EK +LE
Sbjct: 70 --EKQKLE 75
>RGD|1586211 [details] [associations]
symbol:Hoxb8 "homeo box B8" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0008344 "adult locomotory behavior" evidence=ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO]
[GO:0019233 "sensory perception of pain" evidence=ISO] [GO:0021516
"dorsal spinal cord development" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:1586211 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0045638 eggNOG:NOG314669 EMBL:M37565
IPI:IPI00476117 PIR:A43559 UniGene:Rn.231433
ProteinModelPortal:P18863 SMR:P18863 STRING:P18863 UCSC:RGD:1586211
Genevestigator:P18863 Uniprot:P18863
Length = 92
Score = 94 (38.1 bits), Expect = 0.00025, P = 0.00025
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 79 LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENV 138
LE F L R+ +++ LGL RQV +WFQNRR + K + ++ + + K E +
Sbjct: 26 LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEEL 85
Query: 139 VVEKTRLE 146
EK +LE
Sbjct: 86 --EKEKLE 91
>UNIPROTKB|Q9DEB6 [details] [associations]
symbol:CDX1 "Homeobox protein CDX-1" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060349 "bone
morphogenesis" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GeneTree:ENSGT00530000063388 GO:GO:0000976 eggNOG:NOG291290
KO:K09312 EMBL:AB046532 IPI:IPI00807211 RefSeq:NP_990007.2
UniGene:Gga.210 ProteinModelPortal:Q9DEB6 SMR:Q9DEB6 STRING:Q9DEB6
Ensembl:ENSGALT00000009108 GeneID:395397 KEGG:gga:395397 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 InParanoid:Q9DEB6
OrthoDB:EOG42FSK7 NextBio:20815481 Uniprot:Q9DEB6
Length = 260
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 41 QQGEPSKPKRRQRKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGNEHKLESDRKDKLA 98
Q+ P + RR +T+ +G R K ++ T Q LE F + RK +LA
Sbjct: 125 QRRTPYEWMRRSIP-STSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA 183
Query: 99 AELGLDPRQVAVWFQNRRARDKT---KKIEE 126
A LGL RQV +WFQNRRA+++ KK+++
Sbjct: 184 AALGLTERQVKIWFQNRRAKERKVNKKKLQQ 214
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + N K +++L+ E GLD R V VWFQNRRA++K K
Sbjct: 161 ITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKEKRLK 213
>UNIPROTKB|E2RKQ8 [details] [associations]
symbol:CDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060349
"bone morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GeneTree:ENSGT00530000063388
GO:GO:0000976 GO:GO:0060349 KO:K09312 CTD:1044 OMA:YSHVEPG
EMBL:AAEX03003101 RefSeq:XP_855089.1 Ensembl:ENSCAFT00000028928
GeneID:612256 KEGG:cfa:612256 NextBio:20897788 Uniprot:E2RKQ8
Length = 265
Score = 112 (44.5 bits), Expect = 0.00026, P = 0.00026
Identities = 38/105 (36%), Positives = 52/105 (49%)
Query: 29 PSDVLTPTGIVPQQGEPSKPKRRQR------KRNT-----NGNGGFRALKKRKL--TAEQ 75
PS + P G P G PS P ++R +R+ G+G R K ++ T Q
Sbjct: 109 PSLLAQPLG-GP--GAPSSPGAQRRTPYEWMRRSVAAGGGGGSGKTRTKDKYRVVYTDHQ 165
Query: 76 AELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
LE F + RK +LAA LGL RQV +WFQNRRA+++
Sbjct: 166 RLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRRAKER 210
>UNIPROTKB|J9P7A7 [details] [associations]
symbol:EMX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:AAEX03010977
Ensembl:ENSCAFT00000048201 OMA:ILLQMER Uniprot:J9P7A7
Length = 168
Score = 106 (42.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 60 NGGFRALKKRKLTA-EQAELLEMH--FGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
+G F KR TA ++LL + F H + + +LA L L QV VWFQNRR
Sbjct: 63 HGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRR 122
Query: 117 ARDKTKKIEE 126
+ K +K+EE
Sbjct: 123 TKYKRQKLEE 132
>UNIPROTKB|Q58CR9 [details] [associations]
symbol:MEOX1 "Mesenchyme homeo box 1 isoform 1"
species:9913 "Bos taurus" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005730
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0001757 GeneTree:ENSGT00660000095141 HOGENOM:HOG000230987
HOVERGEN:HBG052456 EMBL:DAAA02049232 UniGene:Bt.65876 EMBL:BT021878
IPI:IPI00904405 SMR:Q58CR9 Ensembl:ENSBTAT00000020913
InParanoid:Q58CR9 Uniprot:Q58CR9
Length = 223
Score = 110 (43.8 bits), Expect = 0.00028, P = 0.00028
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 44 EPSKPKRRQRKRNTNGN-------GGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKD 95
E K R++K N++ G +A K+R T EQ LE F + + L R+
Sbjct: 143 ETEKKSTRRKKENSDNQENRAKPEGASKARKERTAFTKEQLRELEAEFAHHNYLTRLRRY 202
Query: 96 KLAAELGLDPRQVAVWFQNRR 116
++A L L RQV VWFQNRR
Sbjct: 203 EIAVNLDLSERQVKVWFQNRR 223
>MGI|MGI:96174 [details] [associations]
symbol:Hoxa2 "homeobox A2" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007379 "segment specification" evidence=IMP] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IGI;IMP] [GO:0021568 "rhombomere 2
development" evidence=IMP] [GO:0021569 "rhombomere 3 development"
evidence=IGI] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IMP] [GO:0035284 "brain segmentation" evidence=IMP]
[GO:0042474 "middle ear morphogenesis" evidence=IGI;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045165 "cell fate commitment" evidence=IMP] [GO:0045665
"negative regulation of neuron differentiation" evidence=IGI;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=IMP] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IGI] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 MGI:MGI:96174 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045 GO:GO:0002076
GO:GO:0007379 GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520
GO:GO:0035284 GO:GO:0048703 GO:GO:0042474 GO:GO:0021568
GeneTree:ENSGT00700000104446 KO:K09302 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 OMA:NCGSGLN
GO:GO:0021658 EMBL:M95599 EMBL:M93148 EMBL:M93292 EMBL:BC117105
EMBL:BC117107 EMBL:M87801 EMBL:AB039191 IPI:IPI00132242 PIR:A42694
PIR:A46037 RefSeq:NP_034581.1 UniGene:Mm.131
ProteinModelPortal:P31245 SMR:P31245 IntAct:P31245 STRING:P31245
PhosphoSite:P31245 PRIDE:P31245 Ensembl:ENSMUST00000014848
GeneID:15399 KEGG:mmu:15399 UCSC:uc009bxz.1 InParanoid:P31245
NextBio:288090 Bgee:P31245 CleanEx:MM_HOXA2 Genevestigator:P31245
GermOnline:ENSMUSG00000014704 Uniprot:P31245
Length = 372
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K ++ VE+ E E + ++ LSV+ +++ + +L
Sbjct: 195 KRQTQCKENQNSEGKFKNLEDSDKVEED--EEEKSLFEQALSVSGALLEREGYTFQQNAL 252
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 253 SQQQA--PNGHNGDSQTFPVSPLTSN 276
>RGD|2813 [details] [associations]
symbol:Hoxa2 "homeo box A2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001709 "cell fate determination"
evidence=ISO] [GO:0002076 "osteoblast development" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;TAS] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007379
"segment specification" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0008045 "motor neuron axon
guidance" evidence=ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO] [GO:0021568 "rhombomere 2 development"
evidence=ISO] [GO:0021569 "rhombomere 3 development" evidence=ISO]
[GO:0021658 "rhombomere 3 morphogenesis" evidence=ISO] [GO:0035284
"brain segmentation" evidence=ISO] [GO:0042474 "middle ear
morphogenesis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389
RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0008045 GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 HOGENOM:HOG000063664 HOVERGEN:HBG006088
OrthoDB:EOG43TZVT CTD:3199 GO:GO:0021658 EMBL:M91802 IPI:IPI00210902
PIR:I52196 RefSeq:NP_036713.2 UniGene:Rn.91077
ProteinModelPortal:P31246 SMR:P31246 STRING:P31246 GeneID:24452
KEGG:rno:24452 UCSC:RGD:2813 InParanoid:P31246 NextBio:603363
Genevestigator:P31246 GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K ++ VE+ E E + ++ LSV+ +++ + +L
Sbjct: 195 KRQTQCKENQNSEGKFKNLEDSDKVEED--EEEKSLFEQALSVSGALLEREGYTFQQNAL 252
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 253 SQQQA--PNGHNGDSQTFPVSPLTSN 276
>UNIPROTKB|P31246 [details] [associations]
symbol:Hoxa2 "Homeobox protein Hox-A2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 RGD:2813 GO:GO:0005634 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0008045 GO:GO:0002076 GO:GO:0007379
GO:GO:0009953 GO:GO:0001709 eggNOG:NOG321520 GO:GO:0035284
GO:GO:0048703 GO:GO:0042474 GO:GO:0021568 KO:K09302
HOGENOM:HOG000063664 HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199
GO:GO:0021658 EMBL:M91802 IPI:IPI00210902 PIR:I52196
RefSeq:NP_036713.2 UniGene:Rn.91077 ProteinModelPortal:P31246
SMR:P31246 STRING:P31246 GeneID:24452 KEGG:rno:24452 UCSC:RGD:2813
InParanoid:P31246 NextBio:603363 Genevestigator:P31246
GermOnline:ENSRNOG00000005968 Uniprot:P31246
Length = 372
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 137 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 194
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K ++ VE+ E E + ++ LSV+ +++ + +L
Sbjct: 195 KRQTQCKENQNSEGKFKNLEDSDKVEED--EEEKSLFEQALSVSGALLEREGYTFQQNAL 252
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 253 SQQQA--PNGHNGDSQTFPVSPLTSN 276
>MGI|MGI:108011 [details] [associations]
symbol:Nobox "NOBOX oogenesis homeobox" species:10090 "Mus
musculus" [GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:108011 GO:GO:0030154
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0048477
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0001541 HSSP:P06601 CTD:135935 eggNOG:NOG325494
HOGENOM:HOG000113810 HOVERGEN:HBG082039 EMBL:AY061761 EMBL:BC125280
EMBL:BC125282 EMBL:U65067 IPI:IPI00129357 RefSeq:NP_570939.1
UniGene:Mm.17715 ProteinModelPortal:Q8VIH1 SMR:Q8VIH1 STRING:Q8VIH1
PhosphoSite:Q8VIH1 PRIDE:Q8VIH1 Ensembl:ENSMUST00000031749
GeneID:18291 KEGG:mmu:18291 UCSC:uc009bsp.1
GeneTree:ENSGT00650000093445 InParanoid:Q8VIH1 OMA:PLLMDVP
OrthoDB:EOG4JQ3X2 NextBio:293732 Bgee:Q8VIH1 CleanEx:MM_NOBOX
Genevestigator:Q8VIH1 GermOnline:ENSMUSG00000029736 Uniprot:Q8VIH1
Length = 527
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 63 FRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKT 121
FR + ++Q E LE F +H +SD++ +++ +G+ P+++ VWFQNRRA+ K
Sbjct: 135 FRKKTRTLYRSDQLEELERIFQEDHYPDSDKRHEISQMVGVTPQRIMVWFQNRRAKWRKV 194
Query: 122 KKIEE 126
+K+ E
Sbjct: 195 EKLNE 199
>UNIPROTKB|O43364 [details] [associations]
symbol:HOXA2 "Homeobox protein Hox-A2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0007379 "segment
specification" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021568 "rhombomere 2 development"
evidence=IEA] [GO:0021658 "rhombomere 3 morphogenesis"
evidence=IEA] [GO:0035284 "brain segmentation" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR001827 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0009952 EMBL:CH471073
GO:GO:0043565 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 EMBL:CH236948 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0008045
GO:GO:0002076 GO:GO:0007379 GO:GO:0009953 GO:GO:0001709
eggNOG:NOG321520 GO:GO:0035284 GO:GO:0048703 GO:GO:0042474
GO:GO:0021568 KO:K09302 EMBL:AC004079 HOGENOM:HOG000063664
HOVERGEN:HBG006088 OrthoDB:EOG43TZVT CTD:3199 EMBL:BC130571
EMBL:BC136500 IPI:IPI00012049 RefSeq:NP_006726.1 UniGene:Hs.445239
UniGene:Hs.592177 ProteinModelPortal:O43364 SMR:O43364
STRING:O43364 PhosphoSite:O43364 PRIDE:O43364
Ensembl:ENST00000222718 GeneID:3199 KEGG:hsa:3199 UCSC:uc003syh.3
GeneCards:GC07M027106 HGNC:HGNC:5103 HPA:HPA029774 MIM:604685
MIM:612290 neXtProt:NX_O43364 Orphanet:93976 Orphanet:140963
PharmGKB:PA29380 InParanoid:O43364 OMA:NCGSGLN PhylomeDB:O43364
GenomeRNAi:3199 NextBio:12724 Bgee:O43364 CleanEx:HS_HOXA2
Genevestigator:O43364 GermOnline:ENSG00000105996 GO:GO:0021658
Uniprot:O43364
Length = 376
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 61 GGFRALKKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARD 119
GG R L+ + EL E HF N++ L R+ ++AA L L RQV VWFQNRR +
Sbjct: 141 GGSRRLRTAYTNTQLLELEKEFHF-NKY-LCRPRRVEIAALLDLTERQVKVWFQNRRMKH 198
Query: 120 KT----KKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISL 175
K K+ + + K+ ++ VE+ E E ++ LSV+ +++ + +L
Sbjct: 199 KRQTQCKENQNSEGKCKSLEDSEKVEED--EEEKTLFEQALSVSGALLEREGYTFQQNAL 256
Query: 176 NNPSATIPTDMDTVDSPFTLDPFAGN 201
+ A P + F + P N
Sbjct: 257 SQQQA--PNGHNGDSQSFPVSPLTSN 280
>UNIPROTKB|F1P4U7 [details] [associations]
symbol:HOXD11 "Homeobox protein Hox-D11" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001759 "organ induction" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0009954 "proximal/distal pattern formation"
evidence=IEA] [GO:0010720 "positive regulation of cell development"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0060351 "cartilage development involved in
endochondral bone morphogenesis" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0032332 GO:GO:0048589 GO:GO:0001759
GO:GO:0010720 GeneTree:ENSGT00700000104263 IPI:IPI00583692
EMBL:AADN02020032 Ensembl:ENSGALT00000015085 Uniprot:F1P4U7
Length = 109
Score = 93 (37.8 bits), Expect = 0.00032, P = 0.00032
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 38 IVPQQGEPSKPKRRQRKRNTNGNGGFRALKKR-KLTAEQAELLEMHFGNEHKLESDRKDK 96
+ G S P +++ + R+ KKR T Q LE F + +++ +
Sbjct: 10 VTTASGAASPPGEAVAEKSNSSAVPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQ 69
Query: 97 LAAELGLDPRQVAVWFQNRRARDK 120
L+ L L RQV +WFQNRR ++K
Sbjct: 70 LSRMLNLTDRQVKIWFQNRRMKEK 93
>UNIPROTKB|Q05916 [details] [associations]
symbol:EN1 "Homeobox protein engrailed-1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000747 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 PROSITE:PS00033
EMBL:L12694 EMBL:L12695 IPI:IPI00582480 PIR:C48423
ProteinModelPortal:Q05916 SMR:Q05916 STRING:Q05916 PRIDE:Q05916
eggNOG:NOG238866 HOVERGEN:HBG005975 InterPro:IPR019549
InterPro:IPR019737 Pfam:PF10525 Uniprot:Q05916
Length = 333
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 45 PSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLD 104
PS P+ R+ K+ R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 227 PSSPRTRKLKKKKTEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELSLN 284
Query: 105 PRQVAVWFQNRRARDK 120
+V +WFQN+RA+ K
Sbjct: 285 ESRVKIWFQNKRAKIK 300
>UNIPROTKB|E2QZN5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 Ensembl:ENSCAFT00000014128 Uniprot:E2QZN5
Length = 334
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 39 VPQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESD 92
VP+ E P+ ++RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 113 VPKL-ETVSPELKERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAF 171
Query: 93 RKDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 172 MREELSQRLGLSEARVQVWFQNRRAK 197
>UNIPROTKB|Q9TTI7 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 HOVERGEN:HBG053120 CTD:5449 eggNOG:NOG241031
KO:K09363 InterPro:IPR015586 PANTHER:PTHR11636:SF17 EMBL:AF035585
RefSeq:NP_001006950.1 UniGene:Cfa.3617 ProteinModelPortal:Q9TTI7
SMR:Q9TTI7 STRING:Q9TTI7 GeneID:403753 KEGG:cfa:403753
NextBio:20817255 Uniprot:Q9TTI7
Length = 291
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 275 SLNQSLFTISKEH 287
>WB|WBGene00004011 [details] [associations]
symbol:pha-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043282 "pharyngeal muscle development"
evidence=IMP] [GO:0042755 "eating behavior" evidence=IMP]
[GO:0042694 "muscle cell fate specification" evidence=IMP]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI;IMP] [GO:0002119 "nematode larval development"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0002119 GO:GO:0042694 GO:GO:0030036 GO:GO:0040014
GO:GO:0042755 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0009887
GO:GO:0000976 GeneTree:ENSGT00680000099625 GO:GO:0043282 KO:K08024
EMBL:FO081140 RefSeq:NP_508131.3 ProteinModelPortal:Q21578
SMR:Q21578 EnsemblMetazoa:M6.3 GeneID:187454 KEGG:cel:CELE_M6.3
UCSC:M6.3 CTD:187454 WormBase:M6.3 InParanoid:Q21578 OMA:DEDEMPN
NextBio:935326 ArrayExpress:Q21578 Uniprot:Q21578
Length = 166
Score = 105 (42.0 bits), Expect = 0.00033, P = 0.00033
Identities = 22/49 (44%), Positives = 27/49 (55%)
Query: 70 KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR 118
+ T EQ + LE F + L + KLA L L RQV WFQNRRA+
Sbjct: 82 RFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNRRAK 130
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYAT 130
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K +
Sbjct: 167 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQR 226
Query: 131 LKTAHENVVVEKTRLESEVATLKE-KLSVAEKEIK---KMSEL--IEGI--SLNNPSATI 182
N+ + +S+ +++E + S AE M+++ G+ SL P+ +
Sbjct: 227 WGQYFRNMKRSRGSSKSDKDSIQEGQDSDAEVSFTDEPSMADMGPANGLYSSLGEPAPAL 286
Query: 183 PTDMDTVDSPFTLDPFAGNLGWFDYEDL 210
+ + S FTLD G G Y +L
Sbjct: 287 GRPVGGLGS-FTLD-HGGLTGPEQYREL 312
>UNIPROTKB|F1SLF3 [details] [associations]
symbol:NOTO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:FP089556 RefSeq:XP_003125078.1 UniGene:Ssc.67372
Ensembl:ENSSSCT00000009097 GeneID:100521005 KEGG:ssc:100521005
Uniprot:F1SLF3
Length = 263
Score = 111 (44.1 bits), Expect = 0.00034, P = 0.00034
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 74 EQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKTKKIEETYATLK 132
EQ E LE F +H L ++ +LAA+L L QV VWFQNRR + K ++++ A+
Sbjct: 178 EQLEELEKVFAKQHNLVGKKRAQLAAQLNLTENQVRVWFQNRRVKYQKQQRLKVPTASAM 237
Query: 133 TA 134
A
Sbjct: 238 AA 239
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 110 (43.8 bits), Expect = 0.00034, P = 0.00034
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 17 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 75
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 76 REELSQRLGLSEARVQVWFQNRRAK 100
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 110 (43.8 bits), Expect = 0.00034, P = 0.00034
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 17 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 75
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 76 REELSQRLGLSEARVQVWFQNRRAK 100
>ZFIN|ZDB-GENE-010108-1 [details] [associations]
symbol:vox "ventral homeobox" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI] [GO:0042661
"regulation of mesodermal cell fate specification" evidence=IGI]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-010108-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0000976 GO:GO:0042661 EMBL:BC092695 IPI:IPI00629975
UniGene:Dr.82511 STRING:Q568V6 HOGENOM:HOG000170671
HOVERGEN:HBG098403 InParanoid:Q568V6 ArrayExpress:Q568V6
Uniprot:Q568V6
Length = 265
Score = 111 (44.1 bits), Expect = 0.00034, P = 0.00034
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 60 NGGFRALKKRKLTAEQAELLEMHFGNEHK-LESDRKDKLAAELGLDPRQVAVWFQNRRAR 118
+G R ++ K T EQ + LE F N+HK L++ + K A +LGL Q+ WFQNRR +
Sbjct: 137 DGATRRIRT-KFTPEQIDKLEKIF-NKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMK 194
Query: 119 DKTKKIEETYA 129
K ++++E A
Sbjct: 195 LK-REVQEMRA 204
>ZFIN|ZDB-GENE-980526-330 [details] [associations]
symbol:cdx4 "caudal type homeo box transcription
factor 4" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0048793 "pronephros
development" evidence=IGI;IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IGI] [GO:0031016 "pancreas development"
evidence=IGI;IMP] [GO:0048617 "embryonic foregut morphogenesis"
evidence=IMP] [GO:0021906 "hindbrain-spinal cord boundary
formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-330
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 HSSP:P02833
GO:GO:0001756 GO:GO:0030097 GO:GO:0031016 GO:GO:0048384
GO:GO:0000976 GO:GO:0009948 GO:GO:0048617 GO:GO:0048793
HOGENOM:HOG000115975 HOVERGEN:HBG005302 GO:GO:0021906 EMBL:X66958
IPI:IPI00489697 PIR:S25706 UniGene:Dr.11836
ProteinModelPortal:Q90262 SMR:Q90262 InParanoid:Q90262
NextBio:20933345 ArrayExpress:Q90262 Uniprot:Q90262
Length = 300
Score = 112 (44.5 bits), Expect = 0.00035, P = 0.00035
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 35 PTGIVPQQGEPSKPKRRQ-----RKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGNEH 87
P I Q P + +R + ++ G R +K ++ T Q LE F
Sbjct: 115 PENIPVAQLSPERERRNSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNR 174
Query: 88 KLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEETYATLKTAHENV------ 138
+ RK +LA LGL RQV +WFQNRRA+++ KK+ ++ + + H +
Sbjct: 175 YITIRRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKLGQSDGSGGSVHSDPGSVSPL 234
Query: 139 ---VVEKTRLES-EVATLKEKLSVAEKEIKKMSELIEGISLNNPSAT 181
V E R V++ E+L+V E+ + +L++P+ T
Sbjct: 235 PVRVTESFRYTRFSVSSTNERLAVHEEHTASYCHSVNS-NLDHPTLT 280
>UNIPROTKB|H0YNM5 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000327 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157
PROSITE:PS00027 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 EMBL:AC130885 InterPro:IPR015586
PANTHER:PTHR11636:SF17 HGNC:HGNC:9210 Ensembl:ENST00000561167
Bgee:H0YNM5 Uniprot:H0YNM5
Length = 216
Score = 109 (43.4 bits), Expect = 0.00035, P = 0.00035
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 140 RKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKT 199
Query: 125 EETYATLKTAHENV 138
+ + E++
Sbjct: 200 SLNQSLFSISKEHL 213
>MGI|MGI:88360 [details] [associations]
symbol:Cdx1 "caudal type homeobox 1" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:88360 GO:GO:0005634 GO:GO:0009952 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GeneTree:ENSGT00530000063388 GO:GO:0000976
GO:GO:0060349 eggNOG:NOG291290 KO:K09312 CTD:1044
HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
OMA:YSHVEPG EMBL:M37163 EMBL:M80463 EMBL:BC019986 IPI:IPI00109616
PIR:A49303 RefSeq:NP_034010.3 UniGene:Mm.144448
ProteinModelPortal:P18111 SMR:P18111 STRING:P18111
PhosphoSite:P18111 PRIDE:P18111 Ensembl:ENSMUST00000025521
GeneID:12590 KEGG:mmu:12590 UCSC:uc008fbj.2 InParanoid:P18111
NextBio:281734 Bgee:P18111 CleanEx:MM_CDX1 Genevestigator:P18111
GermOnline:ENSMUSG00000024619 Uniprot:P18111
Length = 268
Score = 111 (44.1 bits), Expect = 0.00035, P = 0.00035
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 59 GNGGFRALKKRKL--TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
G+G R K ++ T Q LE F + RK +LAA LGL RQV +WFQNRR
Sbjct: 147 GSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKSELAANLGLTERQVKIWFQNRR 206
Query: 117 ARDK 120
A+++
Sbjct: 207 AKER 210
>WB|WBGene00000446 [details] [associations]
symbol:ceh-23 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:FO080278
eggNOG:NOG257690 GeneTree:ENSGT00680000099625 EMBL:L19249
PIR:S44907 RefSeq:NP_498700.1 ProteinModelPortal:P34663 SMR:P34663
STRING:P34663 EnsemblMetazoa:ZK652.5 GeneID:176096
KEGG:cel:CELE_ZK652.5 UCSC:ZK652.5 CTD:176096 WormBase:ZK652.5
HOGENOM:HOG000076961 InParanoid:P34663 OMA:KARTIYG NextBio:891100
Uniprot:P34663
Length = 305
Score = 112 (44.5 bits), Expect = 0.00036, P = 0.00036
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYAT- 130
T + +L +M G + + ++R++ LA LGL P QV +WFQNRR++ + K+ EE +T
Sbjct: 220 TTQTQQLEDMFKGQMYVVGAEREN-LAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTT 278
Query: 131 LKTAHENV 138
L+ E +
Sbjct: 279 LEEKSEEI 286
>ZFIN|ZDB-GENE-980526-403 [details] [associations]
symbol:nkx2.2a "NK2 transcription factor related
2a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0014044 "Schwann cell development" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0033504 "floor
plate development" evidence=IMP] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IGI] [GO:0021530 "spinal cord
oligodendrocyte cell fate specification" evidence=IMP] [GO:0021529
"spinal cord oligodendrocyte cell differentiation" evidence=IMP]
[GO:0021508 "floor plate formation" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-403 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0008045 GO:GO:0031018 GO:GO:0014044 GO:GO:0008347
GO:GO:0021530 GO:GO:0021508 GO:GO:0021514
GeneTree:ENSGT00700000104098 EMBL:BX927409 IPI:IPI00817820
Ensembl:ENSDART00000140549 ArrayExpress:F1QNE4 Bgee:F1QNE4
Uniprot:F1QNE4
Length = 273
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 27/86 (31%), Positives = 44/86 (51%)
Query: 44 EPSKPKRRQRKRNTNGNGGFRALK-KRKLTAEQAEL--LEMHFGNEHKLESDRKDKLAAE 100
EPS + + T+ NG K KR++ +A+ LE F + L + ++ LA+
Sbjct: 106 EPSADESPDNDKETSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASL 165
Query: 101 LGLDPRQVAVWFQNRRARDKTKKIEE 126
+ L P QV +WFQN R + K + E+
Sbjct: 166 IRLTPTQVKIWFQNHRYKMKRARAEK 191
>WB|WBGene00006873 [details] [associations]
symbol:vab-7 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0010171
GO:GO:0040011 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 eggNOG:NOG298527 GeneTree:ENSGT00690000102189
EMBL:Z73428 EMBL:X96636 PIR:T23763 PIR:T43629 RefSeq:NP_499401.1
ProteinModelPortal:Q93899 SMR:Q93899 STRING:Q93899
EnsemblMetazoa:M142.4 GeneID:176521 KEGG:cel:CELE_M142.4
UCSC:M142.4 CTD:176521 WormBase:M142.4 InParanoid:Q93899
OMA:RHHPYDN NextBio:892932 Uniprot:Q93899
Length = 247
Score = 110 (43.8 bits), Expect = 0.00038, P = 0.00038
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 35 PTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRK 94
P G+V + R N + +G R + + EQ LE F E+ + +
Sbjct: 41 PMGVVAAAAAAAAAGRHHPYDNRD-DGQMRRYRTA-FSREQIGRLEREFAKENYVSRKTR 98
Query: 95 DKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
+LAAEL L + VWFQNRR +DK +++
Sbjct: 99 GELAAELNLPEGTIKVWFQNRRMKDKRQRV 128
>UNIPROTKB|G4N2B2 [details] [associations]
symbol:MGG_04853 "Homeoprotein" species:242507 "Magnaporthe
oryzae 70-15" [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CM001233 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043581
RefSeq:XP_003712331.1 ProteinModelPortal:G4N2B2
EnsemblFungi:MGG_04853T0 GeneID:2675295 KEGG:mgr:MGG_04853
Uniprot:G4N2B2
Length = 625
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 16 DNKSNMVLLSQFYPSDVLTPTGIV---PQQGEPSKPKRRQRK--RNTNGNGGFRALKKRK 70
D SNM + PS V G + P P+ P R+ R + + K+++
Sbjct: 23 DTGSNMEVS---IPSPVSAAPGELNETPSPSTPANPNSASRRPPRKSTLTQQQKNQKRQR 79
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK--TKKIEETY 128
T +Q LE F + +D++A E+ + R V +WFQNRRA+ K KK ET
Sbjct: 80 ATQDQLTTLEQEFAKNPTPTATVRDRIAEEINMTERSVQIWFQNRRAKIKLMAKKSLETG 139
Query: 129 ATLKTAHENV 138
+ + E++
Sbjct: 140 EDIDSIPESM 149
>WB|WBGene00000146 [details] [associations]
symbol:ape-1 species:6239 "Caenorhabditis elegans"
[GO:0008219 "cell death" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI;IMP] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISS] Pfam:PF00018
InterPro:IPR002110 InterPro:IPR001452 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50088 SMART:SM00248 SMART:SM00326
GO:GO:0005634 GO:GO:0006915 GO:GO:0043066 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
SUPFAM:SSF50044 eggNOG:NOG283717 GeneTree:ENSGT00680000099694
EMBL:Z81085 PIR:T22316 RefSeq:NP_001256353.1
ProteinModelPortal:Q9XVN3 SMR:Q9XVN3 PaxDb:Q9XVN3
EnsemblMetazoa:F46F3.4a GeneID:179601 KEGG:cel:CELE_F46F3.4
UCSC:F46F3.4 CTD:179601 WormBase:F46F3.4 HOGENOM:HOG000022499
InParanoid:Q9XVN3 OMA:RELEHET NextBio:906106 ArrayExpress:Q9XVN3
Uniprot:Q9XVN3
Length = 769
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 46/195 (23%), Positives = 86/195 (44%)
Query: 18 KSNMVLLSQFY-PSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQA 76
K N + +QF PS+++ G+ PQ E + R R++ + R L R+L E A
Sbjct: 121 KRNNPVNAQFQNPSEMIADYGVKPQSVEMVQRVRAVRRQVADEETELRRL--RELEHETA 178
Query: 77 ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHE 136
+L ++G E +L + + E L+ R ++ RA+ K +EE Y +TA
Sbjct: 179 QLQNKNYGRERELNV--QGSMLKEAQLELRNASM-----RAQSLNKHLEEMYRRRQTAAA 231
Query: 137 NVVVEKTRLES-EVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTL 195
+VE+ +++ ++ + V+ +E+ + +E +NN P+ F+
Sbjct: 232 AALVEQRKMQQHQILLARAANQVSTQEVIRPRASVEPFQVNNTQQQQPSPQMMKSEEFSE 291
Query: 196 D-PFAGNLGWFDYED 209
G G +D D
Sbjct: 292 KRDLNGQTGSYDAID 306
>UNIPROTKB|F1PZH7 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0060133 "somatotropin secreting cell
development" evidence=IEA] [GO:0043567 "regulation of insulin-like
growth factor receptor signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0032962 "positive regulation of inositol trisphosphate
biosynthetic process" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001708 "cell
fate specification" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR000327 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157
PROSITE:PS00027 PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071
PROSITE:PS51179 SMART:SM00352 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0008340 GO:GO:0005737 GO:GO:0008284
GO:GO:0043565 GO:GO:0040018 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030183 GO:GO:0001105
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 GO:GO:0060133 GO:GO:0043567 GO:GO:0032962
GeneTree:ENSGT00700000104015 InterPro:IPR015586
PANTHER:PTHR11636:SF17 OMA:ATNVMST EMBL:AAEX03016386
Ensembl:ENSCAFT00000012423 Uniprot:F1PZH7
Length = 316
Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 240 RKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKT 299
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 300 SLNQSLFTISKEH 312
>UNIPROTKB|F6Y4K5 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 CTD:6474 KO:K09331
OMA:CTEAGRD EMBL:AAEX03013721 Ensembl:ENSCAFT00000014128
RefSeq:XP_003639881.1 GeneID:485732 KEGG:cfa:485732 Uniprot:F6Y4K5
Length = 319
Score = 112 (44.5 bits), Expect = 0.00039, P = 0.00039
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ ++RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 111 PRLTEVS-PELKERKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 169
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 170 REELSQRLGLSEARVQVWFQNRRAK 194
>FB|FBgn0051481 [details] [associations]
symbol:pb "proboscipedia" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0007381
"specification of segmental identity, labial segment"
evidence=IMP;NAS] [GO:0007382 "specification of segmental identity,
maxillary segment" evidence=IMP;NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0048728 "proboscis development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001827
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00032 PROSITE:PS50071 SMART:SM00389 EMBL:AE014297
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AE001572
eggNOG:NOG321520 GO:GO:0048728 GO:GO:0007381 EMBL:S94723
EMBL:S94709 EMBL:S94714 EMBL:S94717 EMBL:S94719 EMBL:X63729
EMBL:X63728 PIR:S20881 RefSeq:NP_476669.3 RefSeq:NP_996161.1
RefSeq:NP_996162.1 RefSeq:NP_996163.1 UniGene:Dm.5646
ProteinModelPortal:P31264 SMR:P31264 STRING:P31264
EnsemblMetazoa:FBtr0089276 GeneID:40826 KEGG:dme:Dmel_CG31481
UCSC:CG31481-RA CTD:40826 FlyBase:FBgn0051481
GeneTree:ENSGT00700000104446 InParanoid:P31264 KO:K09302
OMA:FEAPPIN OrthoDB:EOG4H189X PhylomeDB:P31264 GenomeRNAi:40826
NextBio:820784 Bgee:P31264 GermOnline:CG31481 GO:GO:0007382
Uniprot:P31264
Length = 782
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 45/119 (37%), Positives = 62/119 (52%)
Query: 28 YPSDVL--TPTGI--VPQQGEP-SKPKRRQRKRNTNGNGG------F---RALKKRKLTA 73
YP V+ TP G+ VP+ P K K+ RK + N N G F L +R TA
Sbjct: 147 YPVGVVPQTPDGMDSVPEY--PWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTA 204
Query: 74 -EQAELLEM----HFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEET 127
+LLE+ HF N++ L R+ ++AA L L RQV VWFQNRR + K + + +T
Sbjct: 205 YTNTQLLELEKEFHF-NKY-LCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
>UNIPROTKB|A8MTQ0 [details] [associations]
symbol:NOTO "Homeobox protein notochord" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0030903 "notochord development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009953
GO:GO:0009880 GO:GO:0030903 EMBL:AC010913 EMBL:AK295936
EMBL:AK316410 IPI:IPI00247814 RefSeq:NP_001127934.1
UniGene:Hs.694384 ProteinModelPortal:A8MTQ0 SMR:A8MTQ0
STRING:A8MTQ0 PRIDE:A8MTQ0 Ensembl:ENST00000398468 GeneID:344022
KEGG:hsa:344022 UCSC:uc010yrd.2 CTD:344022 GeneCards:GC02P073429
HGNC:HGNC:31839 HPA:HPA034660 neXtProt:NX_A8MTQ0
PharmGKB:PA134895171 eggNOG:NOG311470 HOGENOM:HOG000082431
HOVERGEN:HBG108196 InParanoid:A8MTQ0 OMA:QQKRVRT OrthoDB:EOG48GW4Q
GenomeRNAi:344022 NextBio:98630 Bgee:A8MTQ0 CleanEx:HS_NOTO
Genevestigator:A8MTQ0 Uniprot:A8MTQ0
Length = 251
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 74 EQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKTKKIEETYATLK 132
EQ E LE F +H L ++ +LAA L L QV VWFQNRR + K +K+ + +
Sbjct: 166 EQLEELEKVFAKQHNLVGKKRAQLAARLKLTENQVRVWFQNRRVKYQKQQKLRAAVTSAE 225
Query: 133 TA 134
A
Sbjct: 226 AA 227
>UNIPROTKB|F1S1H4 [details] [associations]
symbol:MEOX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001757 "somite specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005730 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 OMA:QPPAPVW EMBL:CU928405
RefSeq:XP_003131424.2 Ensembl:ENSSSCT00000018915 GeneID:100516574
KEGG:ssc:100516574 Uniprot:F1S1H4
Length = 254
Score = 110 (43.8 bits), Expect = 0.00041, P = 0.00041
Identities = 33/88 (37%), Positives = 43/88 (48%)
Query: 44 EPSKPKRRQRKR---NTNGNG----GFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKD 95
E K R++K N G G +A K+R T EQ LE F + + L R+
Sbjct: 143 ETEKKSTRRKKESSDNQENRGKPEAGSKARKERTAFTKEQLRELEAEFAHHNYLTRLRRY 202
Query: 96 KLAAELGLDPRQVAVWFQNRRARDKTKK 123
++A L L RQV VWFQNRR + K K
Sbjct: 203 EIAVNLDLSERQVKVWFQNRRMKWKRVK 230
>UNIPROTKB|P15142 [details] [associations]
symbol:CHOX-7 "Homeobox protein CHOX-7" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:X16159 IPI:IPI00683482 PIR:S05005
UniGene:Gga.190 ProteinModelPortal:P15142 SMR:P15142
HOVERGEN:HBG100178 Uniprot:P15142
Length = 124
Score = 92 (37.4 bits), Expect = 0.00041, P = 0.00041
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 59 GNGGFRALKKRK-LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRA 117
G+G ++ ++R T+EQ LE F + L + ++A L L QV +WFQNRRA
Sbjct: 18 GSGAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 77
Query: 118 RDKTKK 123
+ K K
Sbjct: 78 KWKRIK 83
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 92 (37.4 bits), Expect = 0.00041, P = 0.00041
Identities = 28/64 (43%), Positives = 33/64 (51%)
Query: 67 KKR-KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
KKR T Q LE F L DR+ ++A L L RQV +WFQNRR K KKI
Sbjct: 48 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM--KMKKIN 105
Query: 126 ETYA 129
+ A
Sbjct: 106 KDRA 109
>UNIPROTKB|F1MRG3 [details] [associations]
symbol:NOBOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001541 "ovarian
follicle development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001541 CTD:135935 OMA:CPQALGH
GeneTree:ENSGT00650000093445 EMBL:DAAA02011823 IPI:IPI00693587
RefSeq:XP_002687182.2 RefSeq:XP_606837.6 UniGene:Bt.106636
Ensembl:ENSBTAT00000012965 GeneID:528414 KEGG:bta:528414
Uniprot:F1MRG3
Length = 499
Score = 114 (45.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 52 QRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVW 111
Q KR+ R + ++Q E LE F ++H +SD++ ++A +G+ P+++ VW
Sbjct: 105 QEKRSPEVTCQVRKKTRTLYRSDQLEELERLFQDDHYPDSDKRREIAQTVGVTPQRIMVW 164
Query: 112 FQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIE 171
FQNRRA+ + +E+ K A + ++ +++ E L E + + L +
Sbjct: 165 FQNRRAKWRKMNGKES----KDAPAGPALTPAPASNQCSSVAE-LPPTESTMLEPGTLPQ 219
Query: 172 GISLNNPSATIPTD 185
SL PS + +D
Sbjct: 220 D-SLPEPSMLLTSD 232
Score = 38 (18.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 192 PFTLDPFAGNLGWFDYED 209
P L P AGN+G + D
Sbjct: 391 PVLLQPPAGNVGTVPWAD 408
>UNIPROTKB|F1MR82 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:1.10.260.40
SUPFAM:SSF47413 InterPro:IPR013847 PRINTS:PR00028
GeneTree:ENSGT00700000104015 IPI:IPI00715194 UniGene:Bt.180
InterPro:IPR015586 PANTHER:PTHR11636:SF17 EMBL:DAAA02000842
Ensembl:ENSBTAT00000056643 Uniprot:F1MR82
Length = 291
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 275 SLNQSLFTISKEH 287
>UNIPROTKB|P10036 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 HOVERGEN:HBG053120 EMBL:X12657 IPI:IPI00715194
PIR:A31305 RefSeq:NP_777004.1 UniGene:Bt.180
ProteinModelPortal:P10036 SMR:P10036 STRING:P10036 PRIDE:P10036
GeneID:282315 KEGG:bta:282315 CTD:5449 eggNOG:NOG241031
HOGENOM:HOG000116302 KO:K09363 OrthoDB:EOG4JQ3Z4 NextBio:20806113
InterPro:IPR015586 PANTHER:PTHR11636:SF17 Uniprot:P10036
Length = 291
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 275 SLNQSLFTISKEH 287
>UNIPROTKB|D9ZNP5 [details] [associations]
symbol:POU1F1 "POU class 1 homeobox 1" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060133
"somatotropin secreting cell development" evidence=IEA] [GO:0043567
"regulation of insulin-like growth factor receptor signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0032962 "positive regulation of
inositol trisphosphate biosynthetic process" evidence=IEA]
[GO:0030183 "B cell differentiation" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0008340 GO:GO:0005737 GO:GO:0008284 GO:GO:0043565
GO:GO:0040018 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0001077 GO:GO:0030183 GO:GO:0001105 Gene3D:1.10.260.40
SUPFAM:SSF47413 InterPro:IPR013847 PRINTS:PR00028 GO:GO:0060133
GO:GO:0043567 GO:GO:0032962 GeneTree:ENSGT00700000104015 CTD:5449
KO:K09363 InterPro:IPR015586 PANTHER:PTHR11636:SF17 OMA:ATNVMST
RefSeq:NP_999328.1 UniGene:Ssc.16019 GeneID:397325 KEGG:ssc:397325
EMBL:CU633644 EMBL:HM163575 Ensembl:ENSSSCT00000013125
Uniprot:D9ZNP5
Length = 291
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 275 SLNQSLFTISKEH 287
>UNIPROTKB|Q04788 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 HOVERGEN:HBG053120 CTD:5449 eggNOG:NOG241031
HOGENOM:HOG000116302 KO:K09363 OrthoDB:EOG4JQ3Z4 InterPro:IPR015586
PANTHER:PTHR11636:SF17 EMBL:Y13617 EMBL:AF016251 EMBL:L03841
RefSeq:NP_999328.1 UniGene:Ssc.16019 ProteinModelPortal:Q04788
SMR:Q04788 STRING:Q04788 GeneID:397325 KEGG:ssc:397325
Uniprot:Q04788
Length = 291
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 275 SLNQSLFTISKEH 287
>UNIPROTKB|Q6XYB7 [details] [associations]
symbol:LBX2 "Transcription factor LBX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471053
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P13297 HOGENOM:HOG000007247 HOVERGEN:HBG006244
KO:K09353 EMBL:AY305861 EMBL:AY203953 EMBL:BC150517 IPI:IPI00376237
IPI:IPI00550811 RefSeq:NP_001009812.1 UniGene:Hs.722114
ProteinModelPortal:Q6XYB7 SMR:Q6XYB7 IntAct:Q6XYB7
PhosphoSite:Q6XYB7 DMDM:74749508 PaxDb:Q6XYB7 PRIDE:Q6XYB7
DNASU:85474 Ensembl:ENST00000377566 Ensembl:ENST00000460508
GeneID:85474 KEGG:hsa:85474 UCSC:uc002slv.4 UCSC:uc002slw.3
CTD:85474 GeneCards:GC02M074724 HGNC:HGNC:15525 HPA:HPA044257
MIM:607164 neXtProt:NX_Q6XYB7 PharmGKB:PA30305 eggNOG:NOG235470
InParanoid:Q6XYB7 OMA:MVPRAPS GenomeRNAi:85474 NextBio:76128
ArrayExpress:Q6XYB7 Bgee:Q6XYB7 CleanEx:HS_LBX2
Genevestigator:Q6XYB7 Uniprot:Q6XYB7
Length = 198
Score = 107 (42.7 bits), Expect = 0.00044, P = 0.00044
Identities = 32/75 (42%), Positives = 39/75 (52%)
Query: 59 GNGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQN 114
G G F K+RK TA+Q LE F + L +D LA LGL QV WFQN
Sbjct: 77 GPGPF-GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQN 135
Query: 115 RRARDKTKKIEETYA 129
RRA+ K + +EE A
Sbjct: 136 RRAKLK-RDVEEMRA 149
>UNIPROTKB|E2RDU9 [details] [associations]
symbol:MEOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001757
"somite specification" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0060021
GO:GO:0060173 GO:GO:0007519 GO:GO:0001757
GeneTree:ENSGT00660000095141 KO:K09322 CTD:4223 OMA:DHTLFGC
EMBL:AAEX03009347 RefSeq:XP_539446.2 Ensembl:ENSCAFT00000003805
GeneID:482329 KEGG:cfa:482329 NextBio:20856948 Uniprot:E2RDU9
Length = 303
Score = 111 (44.1 bits), Expect = 0.00046, P = 0.00046
Identities = 39/119 (32%), Positives = 58/119 (48%)
Query: 40 PQQGEPSKPKRRQRKRNTNGNGGFRA---LKKRK----LTAEQAELLEMHFGNEHKLESD 92
P + E +R+ + + G +++ K RK T EQ LE F + + L
Sbjct: 155 PAEAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRL 214
Query: 93 RKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TRLESEVA 150
R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T L SE++
Sbjct: 215 RRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTLLPSELS 272
>UNIPROTKB|P50222 [details] [associations]
symbol:MEOX2 "Homeobox protein MOX-2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001757 "somite specification" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008015 "blood
circulation" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005737 GO:GO:0008015
GO:GO:0016607 GO:GO:0043565 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0060021 GO:GO:0060173 eggNOG:NOG250192 GO:GO:0007519
GO:GO:0001757 HOGENOM:HOG000230987 HOVERGEN:HBG052456 KO:K09322
EMBL:X82629 EMBL:L36328 EMBL:AC005550 EMBL:AC004452 EMBL:BC017021
IPI:IPI00030729 PIR:A55641 PIR:A56837 RefSeq:NP_005915.2
UniGene:Hs.170355 ProteinModelPortal:P50222 SMR:P50222
IntAct:P50222 MINT:MINT-202865 STRING:P50222 PhosphoSite:P50222
DMDM:93141286 PRIDE:P50222 DNASU:4223 Ensembl:ENST00000262041
GeneID:4223 KEGG:hsa:4223 UCSC:uc003stc.3 CTD:4223
GeneCards:GC07M015617 H-InvDB:HIX0006493 HGNC:HGNC:7014 MIM:600535
neXtProt:NX_P50222 PharmGKB:PA30748 InParanoid:P50222 OMA:DHTLFGC
OrthoDB:EOG4PZJ7H PhylomeDB:P50222 GenomeRNAi:4223 NextBio:16667
ArrayExpress:P50222 Bgee:P50222 CleanEx:HS_MEOX2
Genevestigator:P50222 GermOnline:ENSG00000106511 Uniprot:P50222
Length = 304
Score = 111 (44.1 bits), Expect = 0.00046, P = 0.00046
Identities = 39/119 (32%), Positives = 58/119 (48%)
Query: 40 PQQGEPSKPKRRQRKRNTNGNGGFRA---LKKRK----LTAEQAELLEMHFGNEHKLESD 92
P + E +R+ + + G +++ K RK T EQ LE F + + L
Sbjct: 156 PAEAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERTAFTKEQIRELEAEFAHHNYLTRL 215
Query: 93 RKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEK-TRLESEVA 150
R+ ++A L L RQV VWFQNRR + K K + A + E V V+K T L SE++
Sbjct: 216 RRYEIAVNLDLTERQVKVWFQNRRMKWKRVKGGQQGAAAREK-ELVNVKKGTLLPSELS 273
>WB|WBGene00003912 [details] [associations]
symbol:pal-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0010467 "gene expression"
evidence=IMP] [GO:0001712 "ectodermal cell fate commitment"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IMP]
[GO:0042693 "muscle cell fate commitment" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0009792 GO:GO:0045944 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GeneTree:ENSGT00530000063388 GO:GO:0043065
GO:GO:0000794 GO:GO:0009880 GO:GO:0000977 GO:GO:0042693 EMBL:Z46241
GO:GO:0000777 eggNOG:NOG291290 KO:K09312 EMBL:X62782 EMBL:X57140
PIR:S15091 PIR:T19829 RefSeq:NP_001021209.1 RefSeq:NP_001021210.1
RefSeq:NP_001254921.1 ProteinModelPortal:P34766 SMR:P34766
IntAct:P34766 MINT:MINT-213983 STRING:P34766
EnsemblMetazoa:C38D4.6a.1 EnsemblMetazoa:C38D4.6a.2 GeneID:175638
KEGG:cel:CELE_C38D4.6 UCSC:C38D4.6a.2 CTD:175638 WormBase:C38D4.6a
HOGENOM:HOG000021335 InParanoid:P34766 OMA:DRRDKQK NextBio:889006
GO:GO:0001712 Uniprot:P34766
Length = 270
Score = 110 (43.8 bits), Expect = 0.00047, P = 0.00047
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 67 KKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
K R + ++ L LE F + SDRK +L+ L L RQ+ +WFQNRRA+D+ K
Sbjct: 208 KYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDK 265
>UNIPROTKB|P34766 [details] [associations]
symbol:pal-1 "Homeobox protein pal-1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0009792 GO:GO:0045944 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0003705 GeneTree:ENSGT00530000063388
GO:GO:0043065 GO:GO:0000794 GO:GO:0009880 GO:GO:0000977
GO:GO:0042693 EMBL:Z46241 GO:GO:0000777 eggNOG:NOG291290 KO:K09312
EMBL:X62782 EMBL:X57140 PIR:S15091 PIR:T19829 RefSeq:NP_001021209.1
RefSeq:NP_001021210.1 RefSeq:NP_001254921.1
ProteinModelPortal:P34766 SMR:P34766 IntAct:P34766 MINT:MINT-213983
STRING:P34766 EnsemblMetazoa:C38D4.6a.1 EnsemblMetazoa:C38D4.6a.2
GeneID:175638 KEGG:cel:CELE_C38D4.6 UCSC:C38D4.6a.2 CTD:175638
WormBase:C38D4.6a HOGENOM:HOG000021335 InParanoid:P34766
OMA:DRRDKQK NextBio:889006 GO:GO:0001712 Uniprot:P34766
Length = 270
Score = 110 (43.8 bits), Expect = 0.00047, P = 0.00047
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 67 KKRKLTAEQAEL-LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
K R + ++ L LE F + SDRK +L+ L L RQ+ +WFQNRRA+D+ K
Sbjct: 208 KYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTMLSLTERQIKIWFQNRRAKDRRDK 265
>RGD|1595088 [details] [associations]
symbol:En1 "engrailed homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISO] [GO:0009954 "proximal/distal
pattern formation" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO]
[GO:0030901 "midbrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISO] [GO:0035115
"embryonic forelimb morphogenesis" evidence=ISO] [GO:0042220
"response to cocaine" evidence=IEP] [GO:0043473 "pigmentation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048666 "neuron
development" evidence=ISO] REFSEQ:XM_003752632 Ncbi:XP_003752680
Length = 353
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 248 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 305
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 306 SQIKIWFQNKRAKIK 320
>UNIPROTKB|B4DQJ0 [details] [associations]
symbol:EVX1 "cDNA FLJ51679, highly similar to Homeobox
even-skipped homolog protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009792 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 EMBL:AC004080 UniGene:Hs.369879 HGNC:HGNC:3506
HOVERGEN:HBG005620 GO:GO:0021913 EMBL:AK298822 IPI:IPI00946777
SMR:B4DQJ0 STRING:B4DQJ0 Ensembl:ENST00000535619 Uniprot:B4DQJ0
Length = 225
Score = 108 (43.1 bits), Expect = 0.00051, P = 0.00051
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 72 TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETY 128
T EQ LE F E+ + R+ +LAA L L + VWFQNRR +DK +++ T+
Sbjct: 9 TREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTW 65
>UNIPROTKB|O14627 [details] [associations]
symbol:CDX4 "Homeobox protein CDX-4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0060711 "labyrinthine
layer development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0001568
GO:GO:0000976 EMBL:CH471104 GO:GO:0060711 eggNOG:NOG291290
KO:K09312 HOGENOM:HOG000115975 HOVERGEN:HBG005302 OrthoDB:EOG42FSK7
EMBL:AF003530 EMBL:AF029879 EMBL:AF029877 EMBL:AF029878
EMBL:AL450108 EMBL:BC128233 IPI:IPI00023058 RefSeq:NP_005184.1
UniGene:Hs.553488 ProteinModelPortal:O14627 SMR:O14627
STRING:O14627 PhosphoSite:O14627 PRIDE:O14627
Ensembl:ENST00000373514 GeneID:1046 KEGG:hsa:1046 UCSC:uc011mqk.2
CTD:1046 GeneCards:GC0XP072583 HGNC:HGNC:1808 MIM:300025
neXtProt:NX_O14627 PharmGKB:PA26353 InParanoid:O14627 OMA:FQPIEIQ
PhylomeDB:O14627 GenomeRNAi:1046 NextBio:4385 Bgee:O14627
CleanEx:HS_CDX4 Genevestigator:O14627 GermOnline:ENSG00000131264
Uniprot:O14627
Length = 284
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00052
Identities = 35/103 (33%), Positives = 47/103 (45%)
Query: 29 PSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKL--TAEQAELLEMHFGNE 86
P+D P + S P RK G R +K ++ T Q LE F
Sbjct: 138 PTDAGAAKASSPSRSRHS-PYAWMRK-TVQVTGKTRTKEKYRVVYTDHQRLELEKEFHCN 195
Query: 87 HKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKT---KKIEE 126
+ RK +LA LGL RQV +WFQNRRA+++ KKI +
Sbjct: 196 RYITIQRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQ 238
>ZFIN|ZDB-GENE-050510-1 [details] [associations]
symbol:cdx1a "caudal type homeo box transcription
factor 1 a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0001756
"somitogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IGI] [GO:0048793 "pronephros
development" evidence=IGI] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI] [GO:0031016 "pancreas development"
evidence=IGI] [GO:0021906 "hindbrain-spinal cord boundary
formation" evidence=IMP] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IGI] [GO:0009948 "anterior/posterior axis
specification" evidence=IGI] [GO:0030097 "hemopoiesis"
evidence=IGI] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR006820 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF04731 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-050510-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0001756 GO:GO:0030097 GO:GO:0031016
GO:GO:0048384 GO:GO:0000976 GO:GO:0009948 GO:GO:0048793
HOVERGEN:HBG005302 EMBL:BC115217 EMBL:AB067733 IPI:IPI00494798
RefSeq:NP_998001.2 UniGene:Dr.84223 SMR:Q8AXR4 GeneID:405762
KEGG:dre:405762 CTD:405762 HOGENOM:HOG000169206 InParanoid:Q8AXR4
NextBio:20817730 GO:GO:0021906 Uniprot:Q8AXR4
Length = 228
Score = 108 (43.1 bits), Expect = 0.00053, P = 0.00053
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 36 TGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMH--FGNEHKLESDR 93
+G + EP RR TN G R K ++ + LE+ F + R
Sbjct: 100 SGAPVDREEPQDWMRRSAVP-TNPGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRR 158
Query: 94 KDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLK 153
K +LA L L RQV +WFQNRRA+++ K ++ ++ + + T S+ +
Sbjct: 159 KAELAGTLNLSERQVKIWFQNRRAKER-KMNKKRLQQVQQSSSGLANTTTVSSSDSGLMT 217
Query: 154 EKLSVAEKE 162
+ +S + KE
Sbjct: 218 DNISSSIKE 226
>FB|FBgn0004862 [details] [associations]
symbol:bap "bagpipe" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0045165 "cell fate
commitment" evidence=NAS] [GO:0007501 "mesodermal cell fate
specification" evidence=TAS] [GO:0007494 "midgut development"
evidence=TAS] [GO:0007522 "visceral muscle development"
evidence=NAS] [GO:0007498 "mesoderm development" evidence=IEP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0007507 "heart development"
evidence=NAS] [GO:0001710 "mesodermal cell fate commitment"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:AE014297 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007501
GO:GO:0007494 eggNOG:NOG279137 EMBL:L17133 EMBL:AY369088
EMBL:AY369089 EMBL:AY369090 EMBL:AY369091 EMBL:AY369092
EMBL:AY369093 EMBL:AY369094 EMBL:AY369095 EMBL:AY369096
EMBL:AY369097 EMBL:AY369098 EMBL:AY369099 EMBL:AY369100
EMBL:AY369101 EMBL:AY369102 EMBL:AY369103 EMBL:AY369104
EMBL:AY369105 EMBL:AY369106 EMBL:AY369107 EMBL:AY369108
EMBL:AY369109 EMBL:AY369110 EMBL:AY369111 EMBL:AY369112
EMBL:AY369113 EMBL:AY369114 EMBL:AY369115 EMBL:M27291 PIR:C33976
RefSeq:NP_732637.1 UniGene:Dm.2963 ProteinModelPortal:P22809
SMR:P22809 STRING:P22809 PaxDb:P22809 PRIDE:P22809
EnsemblMetazoa:FBtr0084087 GeneID:42537 KEGG:dme:Dmel_CG7902
UCSC:CG7902-RA FlyBase:FBgn0004862 GeneTree:ENSGT00700000104206
InParanoid:P22809 KO:K09995 OMA:GPERSEM OrthoDB:EOG4F1VK5
PhylomeDB:P22809 GenomeRNAi:42537 NextBio:829308 Bgee:P22809
GermOnline:CG7902 GO:GO:0007522 Uniprot:P22809
Length = 382
Score = 112 (44.5 bits), Expect = 0.00054, P = 0.00054
Identities = 31/87 (35%), Positives = 46/87 (52%)
Query: 58 NGNGGFRALKKRKLTA-EQAEL--LEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQN 114
+G+G R KKR A A++ LE F + L + ++A L L QV +WFQN
Sbjct: 168 DGSGLSR--KKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQN 225
Query: 115 RRARDKTKKIEETYATLKTAHENVVVE 141
RR + K K+I++ A L A + V V+
Sbjct: 226 RRYKTKRKQIQQHEAALLGASKRVPVQ 252
>UNIPROTKB|Q05925 [details] [associations]
symbol:EN1 "Homeobox protein engrailed-1" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0009954
"proximal/distal pattern formation" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030902 "hindbrain
development" evidence=IEA] [GO:0030917 "midbrain-hindbrain boundary
development" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0043473 "pigmentation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0009653
"anatomical structure morphogenesis" evidence=TAS]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:CH471103 GO:GO:0001501
GO:GO:0048666 GO:GO:0030901 GO:GO:0030902 GO:GO:0009953
GO:GO:0035115 GO:GO:0009954 GO:GO:0009653 GO:GO:0043473
GO:GO:0030917 PROSITE:PS00033 eggNOG:NOG238866 HOVERGEN:HBG005975
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 EMBL:L12699
EMBL:L12698 EMBL:AC012665 IPI:IPI00016734 PIR:B48423
RefSeq:NP_001417.3 UniGene:Hs.271977 ProteinModelPortal:Q05925
SMR:Q05925 STRING:Q05925 PhosphoSite:Q05925 DMDM:215274149
PRIDE:Q05925 DNASU:2019 Ensembl:ENST00000295206 GeneID:2019
KEGG:hsa:2019 UCSC:uc002tlm.3 CTD:2019 GeneCards:GC02M119694
HGNC:HGNC:3342 HPA:CAB014884 MIM:131290 neXtProt:NX_Q05925
PharmGKB:PA27779 HOGENOM:HOG000247054 InParanoid:Q05925 KO:K09319
OMA:NCGPPDG OrthoDB:EOG4H72D0 PhylomeDB:Q05925 GenomeRNAi:2019
NextBio:8181 Bgee:Q05925 CleanEx:HS_EN1 Genevestigator:Q05925
GermOnline:ENSG00000163064 Uniprot:Q05925
Length = 392
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 287 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 344
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 345 SQIKIWFQNKRAKIK 359
>UNIPROTKB|H9KV25 [details] [associations]
symbol:NOBOX "Homeobox protein NOBOX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004534 HGNC:HGNC:22448
ProteinModelPortal:H9KV25 SMR:H9KV25 Ensembl:ENST00000223140
Bgee:H9KV25 Uniprot:H9KV25
Length = 574
Score = 114 (45.2 bits), Expect = 0.00058, P = 0.00058
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 67 KKRKL-TAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIE 125
K R L ++Q E LE F +H +SD++ ++A +G+ P+++ VWFQNRRA K +K+E
Sbjct: 189 KTRTLYRSDQLEELEKIFQEDHYPDSDKRREIAQTVGVTPQRIMVWFQNRRA--KWRKME 246
Query: 126 E 126
+
Sbjct: 247 K 247
>UNIPROTKB|F1N5R9 [details] [associations]
symbol:LOC529707 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043473 "pigmentation" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0009953 GO:GO:0035115 GO:GO:0009954 GO:GO:0043473
GO:GO:0030917 GeneTree:ENSGT00680000099870 PROSITE:PS00033
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
OMA:NCGPPDG EMBL:DAAA02005178 IPI:IPI00716436 RefSeq:XP_003585804.1
Ensembl:ENSBTAT00000038355 GeneID:529707 KEGG:bta:529707
Uniprot:F1N5R9
Length = 400
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 295 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 352
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 353 SQIKIWFQNKRAKIK 367
>UNIPROTKB|F1RY10 [details] [associations]
symbol:EN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043473 "pigmentation" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000747
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048666 GO:GO:0030901 GO:GO:0030902
GO:GO:0009953 GO:GO:0035115 GO:GO:0009954 GO:GO:0043473
GO:GO:0030917 GeneTree:ENSGT00680000099870 PROSITE:PS00033
InterPro:IPR019549 InterPro:IPR019737 Pfam:PF10525 KO:K09319
OMA:NCGPPDG EMBL:CU466366 RefSeq:XP_003133330.1
Ensembl:ENSSSCT00000017115 GeneID:100516112 KEGG:ssc:100516112
Uniprot:F1RY10
Length = 400
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 295 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 352
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 353 SQIKIWFQNKRAKIK 367
>MGI|MGI:95389 [details] [associations]
symbol:En1 "engrailed 1" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
[GO:0009954 "proximal/distal pattern formation" evidence=IMP]
[GO:0016020 "membrane" evidence=ISO] [GO:0030182 "neuron
differentiation" evidence=IGI] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI;IMP] [GO:0030901 "midbrain development"
evidence=IGI] [GO:0030902 "hindbrain development" evidence=IGI]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0043473 "pigmentation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048666 "neuron development" evidence=IGI]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:95389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048666
GO:GO:0030901 GO:GO:0030902 GO:GO:0009953 GO:GO:0035115
GO:GO:0009954 GO:GO:0043473 GO:GO:0030917
GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 CTD:2019 HOGENOM:HOG000247054 KO:K09319 OMA:NCGPPDG
OrthoDB:EOG4H72D0 EMBL:L12703 EMBL:AK140408 EMBL:Y00201
IPI:IPI00132510 PIR:A48423 RefSeq:NP_034263.2 UniGene:Mm.2657
ProteinModelPortal:P09065 SMR:P09065 STRING:P09065
PhosphoSite:P09065 PRIDE:P09065 Ensembl:ENSMUST00000079721
GeneID:13798 KEGG:mmu:13798 InParanoid:Q3USF7 NextBio:284550
Bgee:P09065 CleanEx:MM_EN1 Genevestigator:P09065
GermOnline:ENSMUSG00000058665 Uniprot:P09065
Length = 401
Score = 112 (44.5 bits), Expect = 0.00058, P = 0.00058
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ N R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 296 SGPRTRKLKKKKNEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNE 353
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 354 SQIKIWFQNKRAKIK 368
>UNIPROTKB|P14653 [details] [associations]
symbol:HOXB1 "Homeobox protein Hox-B1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0021570 "rhombomere 4 development" evidence=IEA]
[GO:0021571 "rhombomere 5 development" evidence=IEA] [GO:0021612
"facial nerve structural organization" evidence=IEA] [GO:0021754
"facial nucleus development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS;TAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0007389 "pattern specification process"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0009952
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0048704 GO:GO:0007389 GO:GO:0021612
GO:GO:0021571 GO:GO:0021754 eggNOG:NOG236971 KO:K09301
HOGENOM:HOG000247020 HOVERGEN:HBG006089 GO:GO:0021570
OrthoDB:EOG44F69X EMBL:X16666 EMBL:AC103702 IPI:IPI00294724
PIR:S07541 RefSeq:NP_002135.2 UniGene:Hs.99992 PDB:1B72 PDBsum:1B72
ProteinModelPortal:P14653 SMR:P14653 DIP:DIP-6106N IntAct:P14653
STRING:P14653 PhosphoSite:P14653 DMDM:251757285 PRIDE:P14653
Ensembl:ENST00000239174 GeneID:3211 KEGG:hsa:3211 UCSC:uc002ink.1
CTD:3211 GeneCards:GC17M046606 HGNC:HGNC:5111 HPA:HPA044576
MIM:142968 MIM:614744 neXtProt:NX_P14653 PharmGKB:PA29387
InParanoid:P14653 OMA:YAICNRG PhylomeDB:P14653
EvolutionaryTrace:P14653 GenomeRNAi:3211 NextBio:12776 Bgee:P14653
CleanEx:HS_HOXB1 Genevestigator:P14653 GermOnline:ENSG00000120094
Uniprot:P14653
Length = 301
Score = 110 (43.8 bits), Expect = 0.00059, P = 0.00059
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 29 PSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAEL-LEMHFGNEH 87
PS+ TPT + + + K + G G L+ T + EL E HF N++
Sbjct: 169 PSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHF-NKY 227
Query: 88 KLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEE 126
L R+ ++AA L L+ QV +WFQNRR + K ++ EE
Sbjct: 228 -LSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREE 265
>UNIPROTKB|F1MHR1 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0060133 "somatotropin secreting cell development"
evidence=IEA] [GO:0043567 "regulation of insulin-like growth factor
receptor signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0032962 "positive regulation of inositol trisphosphate
biosynthetic process" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001708 "cell
fate specification" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
InterPro:IPR000327 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR010982 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157
PROSITE:PS00027 PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071
PROSITE:PS51179 SMART:SM00352 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0008340 GO:GO:0005737 GO:GO:0008284
GO:GO:0043565 GO:GO:0040018 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030183 GO:GO:0001105
Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 GO:GO:0060133 GO:GO:0043567 GO:GO:0032962
GeneTree:ENSGT00700000104015 InterPro:IPR015586
PANTHER:PTHR11636:SF17 OMA:ATNVMST EMBL:DAAA02000842
IPI:IPI00905786 Ensembl:ENSBTAT00000012033 Uniprot:F1MHR1
Length = 348
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00059
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK- 123
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 272 RKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVKT 331
Query: 124 -IEETYATLKTAH 135
+ ++ T+ H
Sbjct: 332 SLNQSLFTISKEH 344
>MGI|MGI:97350 [details] [associations]
symbol:Nkx2-5 "NK2 transcription factor related, locus 5
(Drosophila)" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IMP] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001947 "heart looping"
evidence=IMP] [GO:0003007 "heart morphogenesis" evidence=IMP]
[GO:0003148 "outflow tract septum morphogenesis" evidence=ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IGI;IMP]
[GO:0003161 "cardiac conduction system development"
evidence=IGI;ISO] [GO:0003162 "atrioventricular node development"
evidence=IMP] [GO:0003166 "bundle of His development" evidence=IGI]
[GO:0003168 "Purkinje myocyte differentiation" evidence=IMP]
[GO:0003208 "cardiac ventricle morphogenesis" evidence=IMP]
[GO:0003211 "cardiac ventricle formation" evidence=IGI] [GO:0003221
"right ventricular cardiac muscle tissue morphogenesis"
evidence=ISO] [GO:0003222 "ventricular trabecula myocardium
morphogenesis" evidence=IMP] [GO:0003278 "apoptotic process
involved in heart morphogenesis" evidence=IMP] [GO:0003285 "septum
secundum development" evidence=ISO] [GO:0003342 "proepicardium
development" evidence=IMP] [GO:0003350 "pulmonary myocardium
development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003682 "chromatin binding" evidence=ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA;IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=TAS] [GO:0007507 "heart
development" evidence=IGI;IMP] [GO:0007512 "adult heart
development" evidence=ISO;IMP] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0010628 "positive regulation of
gene expression" evidence=IDA] [GO:0010667 "negative regulation of
cardiac muscle cell apoptotic process" evidence=ISO;IMP]
[GO:0010735 "positive regulation of transcription via serum
response element binding" evidence=IDA] [GO:0010736 "serum response
element binding" evidence=IDA] [GO:0010765 "positive regulation of
sodium ion transport" evidence=IMP] [GO:0010832 "negative
regulation of myotube differentiation" evidence=ISO] [GO:0030097
"hemopoiesis" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IGI] [GO:0030509 "BMP signaling pathway" evidence=IDA]
[GO:0030878 "thyroid gland development" evidence=ISO;IMP]
[GO:0035050 "embryonic heart tube development" evidence=IGI]
[GO:0042803 "protein homodimerization activity" evidence=ISO;IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043586 "tongue development" evidence=TAS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045214 "sarcomere organization" evidence=IGI]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO] [GO:0045823 "positive regulation of heart
contraction" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IMP;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0048536 "spleen
development" evidence=IGI;TAS] [GO:0048738 "cardiac muscle tissue
development" evidence=IMP] [GO:0051891 "positive regulation of
cardioblast differentiation" evidence=IMP] [GO:0055005 "ventricular
cardiac myofibril development" evidence=IMP] [GO:0055007 "cardiac
muscle cell differentiation" evidence=IGI;IDA;IMP;TAS] [GO:0055008
"cardiac muscle tissue morphogenesis" evidence=ISO] [GO:0055014
"atrial cardiac muscle cell development" evidence=TAS] [GO:0055015
"ventricular cardiac muscle cell development" evidence=TAS]
[GO:0055117 "regulation of cardiac muscle contraction"
evidence=IMP] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IGI] [GO:0060043 "regulation of cardiac muscle cell
proliferation" evidence=IDA] [GO:0060047 "heart contraction"
evidence=IGI] [GO:0060048 "cardiac muscle contraction"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IDA] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IDA] [GO:0060347 "heart trabecula formation" evidence=IMP]
[GO:0060412 "ventricular septum morphogenesis" evidence=ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=ISO] [GO:0060928
"atrioventricular node cell development" evidence=IMP] [GO:0060929
"atrioventricular node cell fate commitment" evidence=IMP]
[GO:0060971 "embryonic heart tube left/right pattern formation"
evidence=IMP] [GO:0072358 "cardiovascular system development"
evidence=IGI] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:1901387 "positive
regulation of voltage-gated calcium channel activity" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97350 GO:GO:0005737 GO:GO:0042803 GO:GO:0032355
GO:GO:0008284 GO:GO:0043565 GO:GO:0003682 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0060048 GO:GO:0045214
GO:GO:0030509 GO:GO:0060037 GO:GO:0048536 GO:GO:0007512
GO:GO:0045666 GO:GO:0030097 GO:GO:0001570 GO:GO:0001190
GO:GO:0010765 GO:GO:0090090 GO:GO:0001947 GO:GO:0007492
GO:GO:0003151 GO:GO:0060070 GO:GO:0045823 GO:GO:0060347
GO:GO:0010832 GO:GO:0060038 GO:GO:0055117 GO:GO:0001104
GO:GO:0060413 GO:GO:0060971 GO:GO:0060412 GO:GO:0003278
GO:GO:0003222 GO:GO:0030878 GO:GO:0003148 GO:GO:0043586
GO:GO:0060043 GO:GO:0055014 GO:GO:0003221 GO:GO:0051891
GO:GO:0060261 GO:GO:0010667 eggNOG:NOG310976 HOGENOM:HOG000231923
GO:GO:0003166 HOVERGEN:HBG006689 GO:GO:0060928 GO:GO:0055005
GO:GO:0003211 CTD:1482 KO:K09345 OrthoDB:EOG4K0QP6 OMA:YGGAACS
GO:GO:0010736 GO:GO:0060929 GO:GO:0010735 GO:GO:1901387
GO:GO:0003342 GO:GO:0003350 GO:GO:0003168 GO:GO:0003285 EMBL:L20300
EMBL:AF091351 EMBL:X75415 IPI:IPI00117496 RefSeq:NP_032726.1
UniGene:Mm.41974 ProteinModelPortal:P42582 SMR:P42582
DIP:DIP-33031N IntAct:P42582 STRING:P42582 PhosphoSite:P42582
PRIDE:P42582 Ensembl:ENSMUST00000015723 GeneID:18091 KEGG:mmu:18091
InParanoid:P42582 ChiTaRS:NKX2-5 NextBio:293235 Bgee:P42582
Genevestigator:P42582 GermOnline:ENSMUSG00000015579 Uniprot:P42582
Length = 318
Score = 110 (43.8 bits), Expect = 0.00066, P = 0.00066
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 54 KRNTNGNGGFRALKKRK--LTAEQAEL--LEMHFGNEHKLESDRKDKLAAELGLDPRQVA 109
K T+G RA ++RK + QA++ LE F + L + +D+LA+ L L QV
Sbjct: 123 KAETDGAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVK 182
Query: 110 VWFQNRRARDKTKKIEETYATL 131
+WFQNRR + K ++ ++T L
Sbjct: 183 IWFQNRRYKCKRQRQDQTLELL 204
>UNIPROTKB|F1NXJ0 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 IPI:IPI00822533
EMBL:AADN02010005 EMBL:AADN02010006 Ensembl:ENSGALT00000038779
ArrayExpress:F1NXJ0 Uniprot:F1NXJ0
Length = 160
Score = 102 (41.0 bits), Expect = 0.00066, P = 0.00066
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 53 RKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKL-ESDRKDKLAAELGLDPRQVAVW 111
++ N+ G L++ + +Q + LE F + + ++DRK KLA LGL QV +W
Sbjct: 3 QESNSKARRGI--LRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIW 59
Query: 112 FQNRRARDKTKKIEE 126
FQNRR + + K +E
Sbjct: 60 FQNRRMKWRNSKEKE 74
>UNIPROTKB|I3L828 [details] [associations]
symbol:SHOX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
KO:K09331 OMA:CTEAGRD GO:GO:0003170 EMBL:FP312663
RefSeq:NP_001230281.1 UniGene:Ssc.38718 Ensembl:ENSSSCT00000025053
GeneID:100628206 KEGG:ssc:100628206 Uniprot:I3L828
Length = 321
Score = 110 (43.8 bits), Expect = 0.00067, P = 0.00067
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 113 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 171
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 172 REELSQRLGLSEARVQVWFQNRRAK 196
>UNIPROTKB|E1C7F6 [details] [associations]
symbol:CDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR006820
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF04731
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00530000063388 EMBL:AADN02013531 IPI:IPI00588048
Ensembl:ENSGALT00000012400 OMA:GKTRTRE NextBio:20824965
Uniprot:E1C7F6
Length = 279
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 34/96 (35%), Positives = 46/96 (47%)
Query: 33 LTPTGIV-PQQGEPSKPKRRQ----RKR-NTNGNGGFRALKKRKL--TAEQAELLEMHFG 84
L P G V QQ P+ + RK + G R +K ++ T Q LE F
Sbjct: 113 LPPAGTVGTQQVSPTNQRHSSYEWMRKTVQSTSTGKTRTREKYRVVYTDHQRLELEKEFH 172
Query: 85 NEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDK 120
+ RK +LAA L L RQV +WFQNRRA+++
Sbjct: 173 YNRYITIRRKSELAANLRLSERQVKIWFQNRRAKER 208
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 90 (36.7 bits), Expect = 0.00069, P = 0.00069
Identities = 27/59 (45%), Positives = 31/59 (52%)
Query: 67 KKR-KLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
KKR T Q LE F L DR+ ++A L L RQV +WFQNRR K KKI
Sbjct: 3 KKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRM--KMKKI 59
>UNIPROTKB|J9P914 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104050
EMBL:AAEX03016371 Ensembl:ENSCAFT00000046950 Uniprot:J9P914
Length = 113
Score = 90 (36.7 bits), Expect = 0.00069, P = 0.00069
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 94 KDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
K++L GL PR + VWFQN+R +DK K I
Sbjct: 2 KEQLVEMTGLSPRVIRVWFQNKRCKDKKKSI 32
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00069
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 64 RALKKRKL----TAEQAELLEMHFGN-EHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR 118
R LKK+K T +Q + LE F H E R D L+ L LDPRQV WFQNRR +
Sbjct: 106 RPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLD-LSRRLNLDPRQVKFWFQNRRTQ 164
Query: 119 DKTKKIEETYATLKTAHENVVV--EKTRLESEVATLKEKL 156
KT+ IE HEN ++ E +L +E +++E +
Sbjct: 165 MKTQ-IER--------HENALLRQENDKLRAENMSVREAM 195
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 111 (44.1 bits), Expect = 0.00070, P = 0.00070
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 149 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 201
>UNIPROTKB|E1BLB9 [details] [associations]
symbol:E1BLB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060272 "embryonic skeletal joint morphogenesis"
evidence=IEA] [GO:0050772 "positive regulation of axonogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0003170 "heart valve development"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326
GO:GO:0050772 GO:GO:0032330 GO:GO:0001649 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
GeneTree:ENSGT00700000104279 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 OMA:CTEAGRD
GO:GO:0003170 EMBL:DAAA02002472 IPI:IPI00838807 UniGene:Bt.59425
Ensembl:ENSBTAT00000044731 NextBio:20874258 Uniprot:E1BLB9
Length = 331
Score = 110 (43.8 bits), Expect = 0.00071, P = 0.00071
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 111 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 169
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 170 REELSQRLGLSEARVQVWFQNRRAK 194
>UNIPROTKB|O60902 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0003170
"heart valve development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0007507 "heart
development" evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0007507 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
EMBL:AJ002367 EMBL:AJ002368 EMBL:BC008829 EMBL:AF022654
EMBL:AF023203 IPI:IPI00218369 IPI:IPI00295006 IPI:IPI00793628
RefSeq:NP_001157150.1 RefSeq:NP_003021.3 RefSeq:NP_006875.2
UniGene:Hs.55967 ProteinModelPortal:O60902 SMR:O60902 IntAct:O60902
STRING:O60902 PhosphoSite:O60902 PaxDb:O60902 PRIDE:O60902
DNASU:6474 Ensembl:ENST00000389589 Ensembl:ENST00000425436
GeneID:6474 KEGG:hsa:6474 UCSC:uc003fbr.3 UCSC:uc003fbs.3
UCSC:uc010hvw.3 CTD:6474 GeneCards:GC03M157813 HGNC:HGNC:10854
MIM:602504 neXtProt:NX_O60902 PharmGKB:PA35756 eggNOG:NOG113578
HOVERGEN:HBG007233 InParanoid:O60902 KO:K09331 OMA:CTEAGRD
OrthoDB:EOG41C6X2 GenomeRNAi:6474 NextBio:25151 ArrayExpress:O60902
Bgee:O60902 CleanEx:HS_SHOX2 Genevestigator:O60902
GermOnline:ENSG00000168779 Uniprot:O60902
Length = 331
Score = 110 (43.8 bits), Expect = 0.00071, P = 0.00071
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 40 PQQGEPSKPKRRQRKRNTNG--NGGFRALKKRK----LTAEQAELLEMHFGNEHKLESDR 93
P+ E S P+ + RK + G + G +K+R+ T EQ LE F H ++
Sbjct: 111 PRLTEVS-PELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFM 169
Query: 94 KDKLAAELGLDPRQVAVWFQNRRAR 118
+++L+ LGL +V VWFQNRRA+
Sbjct: 170 REELSQRLGLSEARVQVWFQNRRAK 194
>ZFIN|ZDB-GENE-070216-1 [details] [associations]
symbol:otpa "orthopedia homolog a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IGI;IMP] [GO:0007632 "visual behavior" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070216-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0000976 GO:GO:0021884 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D HOGENOM:HOG000039976 OMA:RWATAGM EMBL:CU459136
EMBL:BC162329 EMBL:BC162331 IPI:IPI00484790 RefSeq:NP_001122175.1
UniGene:Dr.87162 STRING:B3DGA5 Ensembl:ENSDART00000027268
GeneID:560759 KEGG:dre:560759 CTD:560759 NextBio:20883602
Uniprot:B3DGA5
Length = 332
Score = 110 (43.8 bits), Expect = 0.00071, P = 0.00071
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 35 PTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAEL--LEMHFGNEHKLESD 92
P G+ + K +++Q+ + + + K+ + A+L LE F H +
Sbjct: 83 PPGVAVNSKDQEKQQQQQQNPTQSSSQQSQKQKRHRTRFTPAQLNELERSFAKTHYPDIF 142
Query: 93 RKDKLAAELGLDPRQVAVWFQNRRA----RDKTKKIEETYATLKTAHENV 138
+++LA +GL +V VWFQNRRA R KT + TL H +
Sbjct: 143 MREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTHHGL 192
>UNIPROTKB|P28069 [details] [associations]
symbol:POU1F1 "Pituitary-specific positive transcription
factor 1" species:9606 "Homo sapiens" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001708 "cell fate specification" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] [GO:0032962 "positive regulation of
inositol trisphosphate biosynthetic process" evidence=IEA]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043567 "regulation of insulin-like growth factor
receptor signaling pathway" evidence=IEA] [GO:0051169 "nuclear
transport" evidence=IEA] [GO:0060133 "somatotropin secreting cell
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0001105
"RNA polymerase II transcription coactivator activity"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000327
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR010982
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00157 PROSITE:PS00027
PROSITE:PS00035 PROSITE:PS00465 PROSITE:PS50071 PROSITE:PS51179
SMART:SM00352 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0008340 GO:GO:0005737 GO:GO:0008285 GO:GO:0008284
GO:GO:0043565 GO:GO:0040018 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030183
GO:GO:0001105 Gene3D:1.10.260.40 SUPFAM:SSF47413 InterPro:IPR013847
PRINTS:PR00028 GO:GO:0060133 GO:GO:0043567 Orphanet:95494
Orphanet:226307 GO:GO:0032962 HOVERGEN:HBG053120 CTD:5449
eggNOG:NOG241031 HOGENOM:HOG000116302 KO:K09363 InterPro:IPR015586
PANTHER:PTHR11636:SF17 EMBL:L18781 EMBL:X62429 EMBL:D10216
EMBL:X72215 EMBL:D12892 EMBL:X77223 EMBL:X77224 EMBL:D11333
IPI:IPI00000794 IPI:IPI00216420 PIR:S18718 RefSeq:NP_000297.1
RefSeq:NP_001116229.1 UniGene:Hs.591654 ProteinModelPortal:P28069
SMR:P28069 STRING:P28069 PhosphoSite:P28069 DMDM:123408
PRIDE:P28069 DNASU:5449 Ensembl:ENST00000344265
Ensembl:ENST00000350375 GeneID:5449 KEGG:hsa:5449 UCSC:uc003dqq.1
UCSC:uc010hoj.1 GeneCards:GC03M087307 HGNC:HGNC:9210 HPA:HPA041646
MIM:173110 MIM:613038 neXtProt:NX_P28069 PharmGKB:PA33534
OMA:ATNVMST GenomeRNAi:5449 NextBio:21089 Bgee:P28069
CleanEx:HS_POU1F1 Genevestigator:P28069 GermOnline:ENSG00000064835
Uniprot:P28069
Length = 291
Score = 109 (43.4 bits), Expect = 0.00073, P = 0.00073
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 67 KKRKLTAEQA--ELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
+KR+ T A + LE HFG ++K S ++A EL L+ V VWF NRR R+K K
Sbjct: 215 RKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKT 274
Query: 125 EETYATLKTAHENV 138
+ + E++
Sbjct: 275 SLNQSLFSISKEHL 288
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 111 (44.1 bits), Expect = 0.00074, P = 0.00074
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 164 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 216
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 102 (41.0 bits), Expect = 0.00075, P = 0.00075
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 68 KRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEET 127
+ K T +Q ++L F K +LA E+ + ++ VWFQNRRAR + +K E
Sbjct: 19 RTKFTEDQLKILIKAFDQNPYPGYATKQRLALEVNAEESRIQVWFQNRRARHQCQKKSEP 78
Query: 128 YATLKTAHENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPT 184
L+++ + E+ E+ + +++ ++ LIE + NNP I T
Sbjct: 79 DEDLESSQDQDYPEE-----EIPSREDRRCRTSYTSSQLHTLIEAFT-NNPYPGIDT 129
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 111 (44.1 bits), Expect = 0.00075, P = 0.00075
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 167 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 219
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 169 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 221
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 3 REMIITNTNHQVEDNKSNMVLLSQFYPSDVLTPTGIVPQ------QGEPSKPKRRQRKRN 56
+E + N+N + + N ++ S PS L+P PQ + P K N
Sbjct: 115 KEDYLNNSNGK-DTNLLSITTCSD--PS--LSPESQDPQDDYKDSESGPMSDKETCNNEN 169
Query: 57 TNGN-GGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNR 115
N GG R + + A+Q E L+ F K +++LA E GL+ R + VWFQNR
Sbjct: 170 DEQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNR 229
Query: 116 RARDKTKK 123
R++++ K
Sbjct: 230 RSKERRMK 237
>UNIPROTKB|E1BRX3 [details] [associations]
symbol:EMX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0021796 "cerebral
cortex regionalization" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0042493 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 OMA:NHHINRW EMBL:AADN02049020
IPI:IPI00586440 Ensembl:ENSGALT00000025935 Uniprot:E1BRX3
Length = 235
Score = 107 (42.7 bits), Expect = 0.00076, P = 0.00076
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 60 NGGFRALKKRKLTA-EQAELLEMH--FGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
+G F KR TA ++LL + F H + + +LA+ L L QV VWFQNRR
Sbjct: 130 HGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRR 189
Query: 117 ARDKTKKIEE 126
+ K +K+EE
Sbjct: 190 TKYKRQKLEE 199
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + K +++L++E GLD R V VWFQNRRA++K K
Sbjct: 169 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLK 221
>UNIPROTKB|G3MWL7 [details] [associations]
symbol:G3MWL7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00680000099625 EMBL:DAAA02030352
Ensembl:ENSBTAT00000063161 Uniprot:G3MWL7
Length = 263
Score = 108 (43.1 bits), Expect = 0.00077, P = 0.00077
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 74 EQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKTKKIEETYATLK 132
EQ E LE F +H + ++ +LAA+L L QV VWFQNRR + K ++++ A+
Sbjct: 178 EQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVWFQNRRVKYQKQQRLKLPAASAM 237
Query: 133 TA 134
A
Sbjct: 238 AA 239
>UNIPROTKB|F1P169 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00700000104097 EMBL:AADN02010005
EMBL:AADN02010006 IPI:IPI00822985 Ensembl:ENSGALT00000015650
ArrayExpress:F1P169 Uniprot:F1P169
Length = 156
Score = 101 (40.6 bits), Expect = 0.00078, P = 0.00077
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 66 LKKRKLTAEQAELLEMHFGNEHKL-ESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
L++ + +Q + LE F + + ++DRK KLA LGL QV +WFQNRR + + K
Sbjct: 11 LRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIWFQNRRMKWRNSKE 69
Query: 125 EE 126
+E
Sbjct: 70 KE 71
>UNIPROTKB|Q91975 [details] [associations]
symbol:DBX2 "Homeobox protein DBX2" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG270330 HOGENOM:HOG000112172
HOVERGEN:HBG104467 OrthoDB:EOG4MPHQG EMBL:X59548 EMBL:X59549
IPI:IPI00822533 PIR:A56566 UniGene:Gga.12249
ProteinModelPortal:Q91975 SMR:Q91975 ArrayExpress:Q91975
Uniprot:Q91975
Length = 157
Score = 101 (40.6 bits), Expect = 0.00082, P = 0.00082
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 66 LKKRKLTAEQAELLEMHFGNEHKL-ESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKI 124
L++ + +Q + LE F + + ++DRK KLA LGL QV +WFQNRR + + K
Sbjct: 11 LRRAVFSEDQRKALEKMFQKQKYISKTDRK-KLAINLGLKESQVKIWFQNRRMKWRNSKE 69
Query: 125 EE 126
+E
Sbjct: 70 KE 71
>UNIPROTKB|F1MJZ3 [details] [associations]
symbol:F1MJZ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009953 GO:GO:0000976 GO:GO:0009880
GO:GO:0030903 GeneTree:ENSGT00680000099625 OMA:QQKRVRT
EMBL:DAAA02030352 IPI:IPI00697755 Ensembl:ENSBTAT00000047327
Uniprot:F1MJZ3
Length = 272
Score = 108 (43.1 bits), Expect = 0.00082, P = 0.00082
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 74 EQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRAR-DKTKKIEETYATLK 132
EQ E LE F +H + ++ +LAA+L L QV VWFQNRR + K ++++ A+
Sbjct: 187 EQLEELEKVFAKQHNIVGKKRAQLAAQLNLTENQVRVWFQNRRVKYQKQQRLKLPAASAM 246
Query: 133 TA 134
A
Sbjct: 247 AA 248
>ZFIN|ZDB-GENE-980526-6 [details] [associations]
symbol:eng1b "engrailed 1b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEP]
InterPro:IPR000747 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00026 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-980526-6 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0048663
GeneTree:ENSGT00680000099870 PROSITE:PS00033 eggNOG:NOG238866
HOVERGEN:HBG005975 InterPro:IPR019549 InterPro:IPR019737
Pfam:PF10525 HOGENOM:HOG000247054 KO:K09319 OrthoDB:EOG4H72D0
EMBL:BX908756 EMBL:CU861653 EMBL:BC091669 IPI:IPI00555352
RefSeq:NP_001013516.1 UniGene:Dr.79493 SMR:Q5BJ08
Ensembl:ENSDART00000016642 GeneID:541371 KEGG:dre:541371 CTD:541371
InParanoid:Q5BJ08 OMA:LPHQAAQ NextBio:20879183 Uniprot:Q5BJ08
Length = 274
Score = 108 (43.1 bits), Expect = 0.00084, P = 0.00084
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 46 SKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDP 105
S P+ R+ K+ + R + TAEQ + L+ F + R+ LA EL L+
Sbjct: 168 SGPRTRKLKKKKSEKEDKRP--RTAFTAEQLQRLKAEFQANRYITEQRRQSLAQELNLNE 225
Query: 106 RQVAVWFQNRRARDK 120
Q+ +WFQN+RA+ K
Sbjct: 226 SQIKIWFQNKRAKIK 240
>FB|FBgn0002522 [details] [associations]
symbol:lab "labial" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IPI] [GO:0007420 "brain development" evidence=IGI;IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0007494
"midgut development" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=TAS] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0035284 "brain segmentation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00032
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0007494 GO:GO:0009790 EMBL:AE001572 GO:GO:0001709
GO:GO:0035284 eggNOG:NOG236971 KO:K09301 EMBL:X13103 EMBL:X13104
EMBL:X13105 EMBL:X13106 EMBL:AY095089 EMBL:M13570 PIR:A30168
PIR:S01164 RefSeq:NP_476613.1 UniGene:Dm.4752
ProteinModelPortal:P10105 SMR:P10105 DIP:DIP-59868N STRING:P10105
GeneID:40817 KEGG:dme:Dmel_CG1264 UCSC:CG1264-RA CTD:40817
FlyBase:FBgn0002522 HOGENOM:HOG000263879 InParanoid:P10105
OMA:ISSENGM OrthoDB:EOG4D7WP6 GenomeRNAi:40817 NextBio:820739
Bgee:P10105 GermOnline:CG1264 Uniprot:P10105
Length = 635
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 35 PTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRK 94
P G+ G S NTN +G K+ E+ E HF N + L R+
Sbjct: 484 PNGMGVGLGSGSGLSSCSLSSNTNNSGRTNFTNKQLTELEK----EFHF-NRY-LTRARR 537
Query: 95 DKLAAELGLDPRQVAVWFQNRRARDKTKKIEETY--ATLKTAHENVVVEKTRLESEVATL 152
++A L L+ QV +WFQNRR + K K+++E A + T H V+ SE
Sbjct: 538 IEIANTLQLNETQVKIWFQNRRMKQK-KRVKEGLIPADILTQHSTSVI------SEKPPQ 590
Query: 153 KEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSP 192
+++ E ++K + G L + + PT T+ +P
Sbjct: 591 QQQPQPPELQLKSQGSDLGGNELATGAPSTPTTAMTLTAP 630
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 112 (44.5 bits), Expect = 0.00087, P = 0.00087
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 71 LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
+TA+Q E L+ + N K +++L+ + GLD R V VWFQNRRA++K K
Sbjct: 266 ITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLK 318
>RGD|1306744 [details] [associations]
symbol:Nkx1-2 "NK1 homeobox 2" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1306744 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
IPI:IPI00776848 Ensembl:ENSRNOT00000054902 UCSC:RGD:1306744
Uniprot:F1M1E1
Length = 268
Score = 99 (39.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 28/84 (33%), Positives = 38/84 (45%)
Query: 37 GIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDK 96
G+ G P P+ R+R+ ++ RA + T EQ LE F L +
Sbjct: 94 GLPASPGSPGSPRPRRRRAESSCAKPRRA--RTAFTYEQLVALENKFRATRYLSVCERLN 151
Query: 97 LAAELGLDPRQVAVWFQNRRARDK 120
LA L L QV +WFQNRR + K
Sbjct: 152 LALSLSLTETQVKIWFQNRRTKWK 175
Score = 44 (20.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 178 PSATIPTDMDTVDSPFTLDPFAG 200
P+A+ P SPFT PF G
Sbjct: 236 PAASFPLTTTATGSPFT--PFLG 256
>UNIPROTKB|F1NCZ0 [details] [associations]
symbol:DLX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0030855
"epithelial cell differentiation" evidence=IEA] [GO:0042472 "inner
ear morphogenesis" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IEA] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0000976
GO:GO:0050679 GeneTree:ENSGT00700000104129 EMBL:AC145963
IPI:IPI00837492 Ensembl:ENSGALT00000038005 ArrayExpress:F1NCZ0
Uniprot:F1NCZ0
Length = 77
Score = 89 (36.4 bits), Expect = 0.00089, P = 0.00089
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 58 NGNGGFRALKKRKLTAE-QAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRR 116
NG G + K R + + Q + L F L + +LAA LGL QV +WFQN+R
Sbjct: 1 NGKGK-KIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKR 59
Query: 117 ARDK 120
++ K
Sbjct: 60 SKFK 63
>UNIPROTKB|I3LRX4 [details] [associations]
symbol:I3LRX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 Ensembl:ENSSSCT00000029259 OMA:PVHVNRI
Uniprot:I3LRX4
Length = 116
Score = 89 (36.4 bits), Expect = 0.00089, P = 0.00089
Identities = 25/70 (35%), Positives = 36/70 (51%)
Query: 64 RALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
R + + T+EQ LE F + L + ++A L L QV +WFQNRRA K K+
Sbjct: 2 RRRRGQHXTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA--KWKR 59
Query: 124 IEETYATLKT 133
++ A KT
Sbjct: 60 VKAGNANSKT 69
>ZFIN|ZDB-GENE-040718-149 [details] [associations]
symbol:meox1 "mesenchyme homeobox 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040718-149 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 EMBL:CR847827
IPI:IPI00865440 RefSeq:NP_001002450.2 UniGene:Dr.83318
Ensembl:ENSDART00000105661 GeneID:436723 KEGG:dre:436723
NextBio:20831164 Uniprot:F1Q4R9
Length = 253
Score = 107 (42.7 bits), Expect = 0.00091, P = 0.00091
Identities = 33/92 (35%), Positives = 44/92 (47%)
Query: 39 VPQQGEPSKPKRRQRKRNTNGNGGFRA---LKKRK----LTAEQAELLEMHFGNEHKLES 91
VP K +R+R+ + F+A K RK T EQ LE F + + L
Sbjct: 138 VPAVDTEKKSSKRKREVTDIQDSSFKADSNCKARKERTAFTKEQLRELEAEFTHHNYLTR 197
Query: 92 DRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
R+ ++A L L RQV VWFQNRR + K K
Sbjct: 198 LRRYEIAVNLDLTERQVKVWFQNRRMKWKRVK 229
>TAIR|locus:2131814 [details] [associations]
symbol:FWA "AT4G25530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEP] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009909 "regulation of flower development" evidence=IEP;RCA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009911
"positive regulation of flower development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AL022197 EMBL:AL161563
Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009911 GO:GO:0031047 HOGENOM:HOG000243256
GO:GO:0006349 EMBL:AF178688 EMBL:AF243535 IPI:IPI00545721
PIR:A85295 RefSeq:NP_567722.1 UniGene:At.2139
ProteinModelPortal:Q9FVI6 SMR:Q9FVI6 IntAct:Q9FVI6 STRING:Q9FVI6
PaxDb:Q9FVI6 PRIDE:Q9FVI6 EnsemblPlants:AT4G25530.1 GeneID:828658
KEGG:ath:AT4G25530 TAIR:At4g25530 eggNOG:NOG295539
InParanoid:Q9FVI6 PhylomeDB:Q9FVI6 Genevestigator:Q9FVI6
GermOnline:AT4G25530 Uniprot:Q9FVI6
Length = 686
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 41/168 (24%), Positives = 67/168 (39%)
Query: 33 LTPTGIVPQQGEPSKPK--RRQRKRNTNGNGGFRALKKRKLTAEQAELLE-MHFGNEHKL 89
L G +P+ GE + N G R + + TA Q + LE + N H
Sbjct: 7 LDAVGNIPKPGEAEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPT 66
Query: 90 ESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEV 149
E R + L L + QV WFQN+R +K TL+ H+ ++ + +L S
Sbjct: 67 EEQRYE-LGQRLNMGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRS-- 123
Query: 150 ATLKEKLSVAEKEIKKMSELIEGISLNNPSATIPTDMDTVDSPFTLDP 197
A L+ ++ K E L +A + ++D +S + P
Sbjct: 124 AMLRSLCNICGKATNCGDTEYEVQKLMAENANLEREIDQFNSRYLSHP 171
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 67 KKR--KLTAEQAELLEMHFGN-EHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKK 123
KKR + T Q + LE F +H E R ++L+ ELGL PRQ+ WFQNRR + K +
Sbjct: 22 KKRFHRHTPHQIQRLESTFNECQHPDEKQR-NQLSRELGLAPRQIKFWFQNRRTQKKAQH 80
Query: 124 IEETYATLKTAHENVVVEKTRLESEV 149
LK ++ + E + +
Sbjct: 81 ERADNCALKEENDKIRCENIAIREAI 106
>UNIPROTKB|P18264 [details] [associations]
symbol:ro "Homeobox protein rough" species:7244 "Drosophila
virilis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007463 "R2/R5
cell fate commitment" evidence=ISS] [GO:0042067 "establishment of
ommatidial planar polarity" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0042067
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0050896
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
EMBL:CH940650 KO:K09362 eggNOG:NOG282802 OMA:VANGFMS
OrthoDB:EOG4P8D17 GO:GO:0007463 EMBL:M35372 PIR:A35967
RefSeq:XP_002054799.1 STRING:P18264 EnsemblMetazoa:FBtr0238517
GeneID:6630225 KEGG:dvi:Dvir_GJ22592 FlyBase:FBgn0013136
InParanoid:P18264 Uniprot:P18264
Length = 340
Score = 109 (43.4 bits), Expect = 0.00098, P = 0.00098
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 50 RRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVA 109
RR+RK G + ++ + EQ LE+ F + R+ +LA L L Q+
Sbjct: 156 RRRRKE------GRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLSETQIK 209
Query: 110 VWFQNRRARDKTKKIEETYATLKTAHENVVV 140
+WFQNRRA+DK +IE+ A + + N VV
Sbjct: 210 IWFQNRRAKDK--RIEK--AQIDQHYRNFVV 236
>FB|FBgn0011278 [details] [associations]
symbol:lbe "ladybird early" species:7227 "Drosophila
melanogaster" [GO:0007483 "genital disc morphogenesis"
evidence=IMP] [GO:0008544 "epidermis development" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS;IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0007517 "muscle organ development"
evidence=IMP;TAS] [GO:0007507 "heart development" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007501 "mesodermal cell fate specification" evidence=TAS]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0048666 "neuron development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0051450 "myoblast
proliferation" evidence=IGI] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0016477 "cell migration"
evidence=IGI] [GO:0007520 "myoblast fusion" evidence=IGI]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 EMBL:AE014297 GO:GO:0005634
GO:GO:0045664 GO:GO:0007507 GO:GO:0016477 GO:GO:0007417
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0007501
GO:GO:0000122 GO:GO:0048813 GO:GO:0007520 GO:GO:0008544
GO:GO:0000976 GO:GO:0007480 GeneTree:ENSGT00700000104206
GO:GO:0042659 GO:GO:0007483 GO:GO:0051450 FlyBase:FBgn0011278
EMBL:BT126373 RefSeq:NP_524435.2 UniGene:Dm.2383 SMR:Q7KS77
STRING:Q7KS77 EnsemblMetazoa:FBtr0084091 GeneID:42542
KEGG:dme:Dmel_CG6545 UCSC:CG6545-RA CTD:42542 InParanoid:Q7KS77
OMA:SPAESEI GenomeRNAi:42542 NextBio:829333 Uniprot:Q7KS77
Length = 479
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 67 KKRK----LTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTK 122
KKRK T Q LE F + L +D++AA LGL QV WFQNRRA+ K +
Sbjct: 352 KKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQK-R 410
Query: 123 KIEETYATLKTAHENVVV---EKTRLES--EVATLKEK 155
IEE LK ++V V K+ LE+ +++ LK+K
Sbjct: 411 DIEE----LKKDFDSVKVFSAHKSFLENVNDLSILKKK 444
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 230 0.00083 113 3 11 23 0.46 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 215
No. of states in DFA: 591 (63 KB)
Total size of DFA: 176 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.94u 0.10s 31.04t Elapsed: 00:00:02
Total cpu time: 30.96u 0.10s 31.06t Elapsed: 00:00:02
Start: Mon May 20 18:57:58 2013 End: Mon May 20 18:58:00 2013
WARNINGS ISSUED: 1