BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026975
(230 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJV5|TATC_ARATH Sec-independent protein translocase protein TATC, chloroplastic
OS=Arabidopsis thaliana GN=TATC PE=1 SV=2
Length = 340
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/230 (92%), Positives = 226/230 (98%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
M+IFDHLEELR+RIFVSVLAVGAAILGCFA+SK+LI+FLEAPVK++GVRFLQLAPGEFFF
Sbjct: 111 MTIFDHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFF 170
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSYWVL
Sbjct: 171 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVL 230
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVG+V+ DQM
Sbjct: 231 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQM 290
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
LSIWRYVVVGAV+AAAV+TPSTDPVTQMLLA PLLGLY GGAWMVKLTGR
Sbjct: 291 LSIWRYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340
>sp|Q94G17|TATC_PEA Sec-independent protein translocase protein TATC, chloroplastic
OS=Pisum sativum GN=TATC PE=1 SV=1
Length = 353
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/230 (86%), Positives = 218/230 (94%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSIFDHLEELR+RIF+SVL VG +ILGCFA+SK+L+ LEAPVKSEGVRFLQLAPGEFFF
Sbjct: 124 MSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFF 183
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
TTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+FLGPIVLGSSVLFYAGI FSY VL
Sbjct: 184 TTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVL 243
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PAALNFFVNYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVP+IQLLLGQ+GLV+ D+M
Sbjct: 244 VPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQLLLGQLGLVSGDKM 303
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
LS+WRYVVVGAV+AAAV+TPSTDP+TQ+LLAAPLLGLY GGAWMVKL GR
Sbjct: 304 LSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLAGR 353
>sp|Q9AVE6|TATC_ORYSJ Sec-independent protein translocase protein TATC, chloroplastic
OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1
Length = 359
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/230 (90%), Positives = 217/230 (94%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSIFDHLEELR RIFVSVLAVGAAILGCFAYSK+LI LEAPV +GVRFLQL+PGEFFF
Sbjct: 130 MSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQGVRFLQLSPGEFFF 189
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLGPIVLGSSVLFY GI FSY VL
Sbjct: 190 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVL 249
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PAALNFFVNYA+G VESLWSIDQYFEFVLVL+FSTGLSFQVPVIQLLLGQVGLV+SDQM
Sbjct: 250 APAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQLLLGQVGLVSSDQM 309
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
LSIWRYVVVGAV+AAAVLTPSTDP+TQMLLA PLLGLY GGAWMVKLTGR
Sbjct: 310 LSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLTGR 359
>sp|C4IZX0|TATC_MAIZE Sec-independent protein translocase protein TATC, chloroplastic
OS=Zea mays GN=TATC PE=2 SV=1
Length = 356
Score = 346 bits (887), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/230 (87%), Positives = 221/230 (96%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSIFDHLEELR RIF+SVLAVGAAILGCFA+SK+L++FLEAPV ++GVRFLQL+PGEFFF
Sbjct: 127 MSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEAPVTAQGVRFLQLSPGEFFF 186
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
TTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FLGPIVLGSSVLFY GI FSY VL
Sbjct: 187 TTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVL 246
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
+PAALNFFVNYA+G VESLWSIDQYFEF+LVLMFSTGLSFQVPVIQLLLGQ+GLV+SDQM
Sbjct: 247 SPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGLVSSDQM 306
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
LSIWRYVVVGAV+AAAVLTPSTDP+TQMLLA PLLGLY GGAWMVK+TGR
Sbjct: 307 LSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKITGR 356
>sp|P54086|TATC_SYNY3 Sec-independent protein translocase protein TatC OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1
Length = 254
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 188/230 (81%), Gaps = 2/230 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+FDHL+ELR RIF+S+ AV ++ CF + K L+ +L+ P + V+FLQL+PGEFFF
Sbjct: 27 MSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLSPGEFFF 84
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG+ F+Y+ L
Sbjct: 85 VSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAGLGFAYYAL 144
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PAAL FFV+Y VVE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG +G+V+S+QM
Sbjct: 145 IPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFLGIVSSEQM 204
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
L WR+V++GA++ A+LTPSTDP+TQ LLA +LGLYFGG V+L G+
Sbjct: 205 LKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254
>sp|Q6B8S9|YCF43_GRATL Uncharacterized tatC-like protein ycf43 OS=Gracilaria
tenuistipitata var. liui GN=ycf43 PE=3 SV=1
Length = 238
Score = 247 bits (631), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 168/230 (73%), Gaps = 2/230 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSIF+HLEELRQRIF++ L CF Y K + L+ P + G++FLQLAPGE+ F
Sbjct: 11 MSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQP--AIGIKFLQLAPGEYLF 68
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
T++KV+ Y G LL SP I+Y+I F+LPGLT+ E F+ PI+ S +LF++GI F+Y +L
Sbjct: 69 TSIKVALYSGFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFAYIIL 128
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PAAL F +NY +VE +WS +QYF F+L+L+FSTG++FQ+P+IQ++LG + + +S +M
Sbjct: 129 VPAALKFLINYGNEIVEPIWSFEQYFNFILLLLFSTGIAFQIPIIQVILGILKIFSSSEM 188
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
+ W+Y+V+GA + AA++TPSTDP+TQ++++ +L LY G ++K+ +
Sbjct: 189 YAYWKYIVLGATVIAAIITPSTDPITQIIMSIAILALYSSGIIILKILNK 238
>sp|O78493|YCF43_GUITH Uncharacterized tatC-like protein ycf43 OS=Guillardia theta
GN=ycf43 PE=3 SV=1
Length = 290
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 166/225 (73%), Gaps = 2/225 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+ +HLEE+RQR F S + I+ C + K ++ L+ P + G++FLQ APGE+FF
Sbjct: 57 MSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEP--AAGIKFLQFAPGEYFF 114
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
++KV+ Y G+L+ SP I+Y+I+ FVLPG+T+ ER+ L PI++GS +LF G+ F Y++L
Sbjct: 115 ASIKVAAYSGILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIFGYYIL 174
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PA+LNFF+ Y VVE WS +QYFEF+LVL+F T L+FQ+PV+QL+LG + +V+ M
Sbjct: 175 VPASLNFFIKYGSDVVEPFWSFEQYFEFILVLLFGTALAFQLPVLQLVLGFLRIVSGKTM 234
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMV 225
SIWRYV++ + + AVLTPS DP+TQ+LL++ +L LYFGGA +V
Sbjct: 235 FSIWRYVILLSTVVGAVLTPSVDPLTQILLSSIILILYFGGASLV 279
>sp|P51264|YCF43_PORPU Uncharacterized tatC-like protein ycf43 OS=Porphyra purpurea
GN=ycf43 PE=3 SV=1
Length = 254
Score = 224 bits (572), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 168/222 (75%), Gaps = 4/222 (1%)
Query: 1 MSIFDHLEELRQR-IFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFF 59
MSI +HLEELRQR +FV + + AA + F K ++ +AP + G++FLQLAPGE+F
Sbjct: 27 MSITEHLEELRQRTVFVFIFFLLAATIS-FTQIKIIVEIFQAP--AIGIKFLQLAPGEYF 83
Query: 60 FTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWV 119
F+++K++ YCG++ +P +Y++I ++LPGLT ER+ + PI++GS VLF G F+Y+V
Sbjct: 84 FSSIKIAIYCGIVATTPFGVYQVILYILPGLTNKERKVILPILIGSIVLFIVGGIFAYFV 143
Query: 120 LTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 179
L PAALNF ++Y +VE LWS +QYF+F+L+L+FSTGL+F++P+IQLLLG G V++ Q
Sbjct: 144 LAPAALNFLISYGADIVEPLWSFEQYFDFILLLLFSTGLAFEIPIIQLLLGISGTVSASQ 203
Query: 180 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 221
ML WRY+++ + I AVLTPSTDPVTQ+++++ +L LYF G
Sbjct: 204 MLLAWRYIIIISTIIGAVLTPSTDPVTQIIMSSAVLALYFSG 245
>sp|Q9TLS5|YCF43_CYACA Uncharacterized tatC-like protein ycf43 OS=Cyanidium caldarium
GN=ycf43 PE=3 SV=1
Length = 239
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 167/227 (73%), Gaps = 2/227 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSI++HLEELRQR S++A+ +++ C LI ++ P + G++FLQL+PGE+FF
Sbjct: 12 MSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQP--AIGIKFLQLSPGEYFF 69
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
T++K++ Y G++L SP+I YEII F++PGLT+ ERR L PI++ S LF AG+ F Y +
Sbjct: 70 TSIKITLYLGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIFGYIYI 129
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
TP A+ FF+NY + ++E +WS +YF+F+++ +FST +SFQ+P+ Q+LLG + ++ S M
Sbjct: 130 TPIAVRFFINYGKDMIEPIWSFKEYFDFIILSLFSTAISFQIPIFQILLGSLKIINSKMM 189
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKL 227
LS+WRYVVVG+ I +A++TPSTDP+ Q+ L+ ++ LYF ++KL
Sbjct: 190 LSVWRYVVVGSTIFSAIITPSTDPLIQLFLSVAVMFLYFSSILVLKL 236
>sp|P49538|YCF43_ODOSI Uncharacterized tatC-like protein ycf43 OS=Odontella sinensis
GN=ycf43 PE=3 SV=1
Length = 263
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 157/217 (72%), Gaps = 2/217 (0%)
Query: 5 DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLK 64
+H+EEL+QR+F + + K L+ LE PV + V+F QL+PGE+F +T+K
Sbjct: 40 EHIEELKQRLFHTFWIILILTFISLCEVKLLVKILELPVNN--VKFFQLSPGEYFVSTVK 97
Query: 65 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAA 124
+S Y G L GSP + +II F+LPGLT+ E + + P++L S LF G+ FSY+ L PAA
Sbjct: 98 ISFYTGFLFGSPFAIGQIILFLLPGLTKKETKIILPLLLSSLGLFGFGLVFSYYALIPAA 157
Query: 125 LNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIW 184
LNFF+NY++ V+E LWS DQYFEF+LVL +STGL+FQ+P+IQ+LLG + ++++ QML+ W
Sbjct: 158 LNFFLNYSDEVIEPLWSFDQYFEFILVLFYSTGLAFQIPIIQILLGLLNIISAKQMLAAW 217
Query: 185 RYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 221
RY+++ + I A+LTPSTDP+TQ+LL+ +L LYF G
Sbjct: 218 RYIILVSTIIGAILTPSTDPLTQLLLSIAILMLYFSG 254
>sp|Q1XDM3|YCF43_PORYE Uncharacterized tatC-like protein ycf43 OS=Porphyra yezoensis
GN=ycf43 PE=3 SV=1
Length = 254
Score = 211 bits (536), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 161/221 (72%), Gaps = 2/221 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MSI +HLEELRQR L A F K ++ L+AP + G++FLQLAPGE+FF
Sbjct: 27 MSITEHLEELRQRTLFVFLFFLFATTISFTQIKIIVAILQAP--AVGIKFLQLAPGEYFF 84
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
+++KV+ YCG++ +P +Y++I ++LPGLT ER+ + P+++ S +LF G F+Y+VL
Sbjct: 85 SSIKVAIYCGIVATTPFAVYQVILYILPGLTGKERKIILPLLISSVLLFITGGIFAYFVL 144
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
PAAL F ++Y +VE LWS +QYF+F+L+L+ STGL+F++P+IQLLLG G +S QM
Sbjct: 145 APAALTFLISYGSDIVEPLWSFEQYFDFILLLLLSTGLAFEIPIIQLLLGVSGTFSSSQM 204
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 221
+ WRY+++ A IA A+LTPSTDPVTQ+++++ +L LYFGG
Sbjct: 205 IRAWRYIIIIATIAGAILTPSTDPVTQLIMSSAVLLLYFGG 245
>sp|D2BJS8|TATC_DEHSV Sec-independent protein translocase protein TatC OS=Dehalococcoides
sp. (strain VS) GN=tatC PE=3 SV=1
Length = 262
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 131/230 (56%), Gaps = 1/230 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
M I H ELRQR ++A+ ++ F ++ +I FL AP + QL E+
Sbjct: 25 MPIGGHFNELRQRFTRGIIALVMGVMVAFFFATPIIGFLTAP-GGPDFKPAQLGVMEYAS 83
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
VS + G ++ SP ILY++IAF+ P L R E++F+ + +V+F AG+AF+Y+V
Sbjct: 84 VFFNVSLWAGFIIASPYILYQLIAFITPALNRNEKKFIFIAIPAVTVMFLAGLAFAYYVA 143
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
P ALN +++ + VV ++ I Y V ++ + GL F+ P I ++L ++G+V+ +
Sbjct: 144 LPPALNILLHWGDDVVLTVVGIKDYMNVVTRILIALGLIFETPFIIMVLARLGVVSPQWL 203
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
S + VV A + AA++TP+ DPV Q ++A PL+ LY W+ KL R
Sbjct: 204 ASKRKIWVVIAFVIAALITPTFDPVNQTIMAGPLIVLYEISIWLSKLVYR 253
>sp|A0L833|TATC_MAGSM Sec-independent protein translocase protein TatC OS=Magnetococcus
sp. (strain MC-1) GN=tatC PE=3 SV=1
Length = 271
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 131/217 (60%), Gaps = 4/217 (1%)
Query: 5 DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGEFFFT 61
+HL ELR R+ +SV A+ + C+++S+++ FL AP+ + + A E FFT
Sbjct: 13 EHLIELRNRLMISVGAIIVGFILCYSFSEQIFEFLAAPLHEILGPQAKMIYTALHEAFFT 72
Query: 62 TLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLT 121
+KVS + GL L PV+ ++ F+ PGL + ER + P + + VLF+ G +Y+ +
Sbjct: 73 QIKVSFFAGLFLAMPVLFTQMWLFIAPGLYQHERSAILPFLFVTPVLFFMGGTLAYYFVF 132
Query: 122 PAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQML 181
P A FF+ + +E+L S+ +Y V+ L+ + G++F++PV LL + G+V++ ++
Sbjct: 133 PLAFKFFLGFQSSTIEALPSMREYLSLVIKLIIAFGITFELPVGLLLAIKAGVVSTAGLV 192
Query: 182 SIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+Y +V A +AAA+LTP DP TQ++LA P++ +Y
Sbjct: 193 DKRKYNIVLAFVAAAILTPP-DPFTQVMLAIPIMLMY 228
>sp|O67305|TATC_AQUAE Sec-independent protein translocase protein TatC OS=Aquifex
aeolicus (strain VF5) GN=tatC PE=1 SV=1
Length = 240
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 139/236 (58%), Gaps = 10/236 (4%)
Query: 1 MSIFDHLEELRQRIFVSVLA--VGAAILGCFAYSKELIMFLEAPV-KS-EGVRFLQLAPG 56
M + +HL ELR R+ +S++A +G+ I F ++K + L+ P+ KS V + L+P
Sbjct: 1 MPLTEHLRELRYRLIISIIAFLIGSGI--AFYFAKYVFEILKEPILKSYPEVELITLSPT 58
Query: 57 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 116
E F +K+S G ++ SPVILY+ F+ P L E+R P++LGS +LF G F+
Sbjct: 59 EPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFA 118
Query: 117 YWVLTPAALNFF--VNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 174
Y+++ P AL F + + + + S+D Y FVL L+ + G++F++P++ +L + G+
Sbjct: 119 YFIVLPLALKFLLGLGFTQLLATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQKAGV 178
Query: 175 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
+T +Q+ S +Y +V A + A++ P D TQ+L+A PLL LY ++ KL R
Sbjct: 179 ITPEQLASFRKYFIVIAFVIGAIIAP--DVSTQVLMAIPLLLLYEISIFLGKLATR 232
>sp|Q9RW63|TATC_DEIRA Sec-independent protein translocase protein TatC OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=tatC PE=3 SV=1
Length = 270
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 125/223 (56%), Gaps = 6/223 (2%)
Query: 2 SIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVK------SEGVRFLQLAP 55
+FDHLEELR+R+ +SV+ + ++ F Y +LI ++ P+ + V+ +
Sbjct: 23 PLFDHLEELRRRLILSVVFLAVGMVIAFTYRVQLIELVKVPLTYSELYTTGKVQLVTTKL 82
Query: 56 GEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAF 115
+ ++ + GL L P I+++I AF+ PGL ERR+ P +LG+ F AG+ F
Sbjct: 83 ASQLLLSFNLAFWAGLTLALPFIVWQIWAFIAPGLYPQERRWGLPFILGAGFAFAAGVVF 142
Query: 116 SYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLV 175
Y ++ P + F + + G V + + +Y V+ + + G++F++P++ ++L ++G+V
Sbjct: 143 GYKLVLPTMVPFLIEFLAGTVTQMQDLQEYIGTVVTFLVAFGVAFELPILAVILTRLGIV 202
Query: 176 TSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+ WR+ ++G +I AAV+TP+ DP L+A PL LY
Sbjct: 203 NHTMLRQGWRFALIGIMILAAVITPTPDPANMALVAVPLYALY 245
>sp|Q9ZM59|TATC_HELPJ Sec-independent protein translocase protein TatC OS=Helicobacter
pylori (strain J99) GN=tatC PE=3 SV=1
Length = 249
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKV 65
HL+ELR+R+ VSV + A LGCF + K + F++ K +QL+P E +K+
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKNIFEFVKNSYKG---TLIQLSPIEGVMVAVKI 64
Query: 66 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAAL 125
S +++ P+I +++ F+ PGL + E++ + P V S +F G AFSY+V+ P +
Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLMGAAFSYYVVFPFII 124
Query: 126 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWR 185
+ + V + S Y F L+ G++F++PV+ L +VGL+T + + ++
Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184
Query: 186 YVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
Y +V I AA++TP D V+Q+ +A PL+GLY
Sbjct: 185 YAIVVIFIVAAIITPP-DVVSQIFMALPLVGLY 216
>sp|O25701|TATC_HELPY Sec-independent protein translocase protein TatC OS=Helicobacter
pylori (strain ATCC 700392 / 26695) GN=tatC PE=3 SV=1
Length = 253
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKV 65
HL+ELR+R+ VSV + A LGCF + K + F++ K +QL+P E +K+
Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKNSYKG---TLIQLSPIEGVMVAVKI 64
Query: 66 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAAL 125
S +++ P+I +++ F+ PGL + E++ + P V S +F G AFSY+V+ P +
Sbjct: 65 SFSAAIVISMPIIFWQLWLFIAPGLYKNEKKVILPFVFFGSGMFLIGAAFSYYVVFPFII 124
Query: 126 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWR 185
+ + V + S Y F L+ G++F++PV+ L +VGL+T + + ++
Sbjct: 125 EYLATFGSDVFAANISASSYVSFFTRLILGFGVAFELPVLAYFLAKVGLITDASLKAYFK 184
Query: 186 YVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
Y +V I AA++TP D V+Q+ +A PL+GLY
Sbjct: 185 YAIVVIFIVAAIITPP-DVVSQIFMALPLVGLY 216
>sp|P54085|TATC_AZOCH Sec-independent protein translocase protein TatC OS=Azotobacter
chroococcum mcd 1 GN=tatC PE=3 SV=2
Length = 255
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGE 57
M + HL ELR R+ SV AV F +++++ + AP+++ EG +
Sbjct: 11 MPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQDIYALVSAPLRAYLPEGATMIATGVAS 70
Query: 58 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 117
F K++ L L PV+L+++ F+ PGL + E+R P++ S +LFYAG+AF+Y
Sbjct: 71 PFLAPFKLTLMISLFLAMPVVLHQVWGFIAPGLYQHEKRIAMPLMASSVLLFYAGMAFAY 130
Query: 118 WVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTS 177
+V+ P FF + V + I QY +FVL L F+ G++F+VPV LL VG+V
Sbjct: 131 FVVFPIMFGFFASVTPEGVAMMTDIGQYLDFVLTLFFAFGVAFEVPVATFLLIWVGIVDV 190
Query: 178 DQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL-----LGLYFGG 221
+ + YV+VG + VLTP D +Q LLA P+ +G++FG
Sbjct: 191 ASLRNSRPYVIVGCFVVGMVLTPP-DVFSQTLLAVPMWLLFEIGVFFGA 238
>sp|C0QD59|TATC_DESAH Sec-independent protein translocase protein TatC
OS=Desulfobacterium autotrophicum (strain ATCC 43914 /
DSM 3382 / HRM2) GN=tatC PE=3 SV=1
Length = 270
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
Query: 5 DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPGEFFFT 61
+HL ELR R+ S +AVG + + + + L L AP+ + EG + + E FFT
Sbjct: 12 EHLGELRDRLVRSFIAVGVGFVIAYCFKERLFDILTAPLIAAMGEGQKMIFTGLPEAFFT 71
Query: 62 TLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLT 121
LKVS G++L +PV+ YE FV PGL R E+RF+ P+V+ S F G +F Y+++
Sbjct: 72 YLKVSLLTGVILATPVLFYEFWMFVSPGLYRKEKRFVLPVVILSIFFFCVGSSFGYFIVF 131
Query: 122 PAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQML 181
P FF+ ++ ++++ S+ +Y F ++ + G F++P++ + ++GLV+ + +
Sbjct: 132 PYGFQFFLGFSSDTIQAMPSMKEYLGFASKMLLAFGFVFELPLVLTFMARMGLVSVEFLK 191
Query: 182 SIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+Y ++ AA++TP D VTQ+++A PL+ LY
Sbjct: 192 KNRKYAILIFFTGAALITPP-DVVTQIMMAIPLMILY 227
>sp|P69423|TATC_ECOLI Sec-independent protein translocase protein TatC OS=Escherichia
coli (strain K12) GN=tatC PE=1 SV=2
Length = 258
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 62
HL ELR+R+ ++AV L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 63 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 122
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 123 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 182
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 183 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 226
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|P69424|TATC_ECO57 Sec-independent protein translocase protein TatC OS=Escherichia
coli O157:H7 GN=tatC PE=3 SV=2
Length = 258
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 62
HL ELR+R+ ++AV L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 63 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 122
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 123 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 182
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 183 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 226
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|Q1IN69|TATC_KORVE Sec-independent protein translocase protein TatC OS=Koribacter
versatilis (strain Ellin345) GN=tatC PE=3 SV=1
Length = 271
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 131/239 (54%), Gaps = 10/239 (4%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE------GVRFLQLA 54
MS +HLEELR+RI + + + A C+ + +++ F++ P+ + + L
Sbjct: 22 MSFLEHLEELRRRIIWTFVYIAAGFGVCWWWHEQIYDFMQRPIMKALAANHLDQKLVYLN 81
Query: 55 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 114
P E F LK++ GL + SP +LY++ F+ PGL + ERR++ P + + +LF G
Sbjct: 82 PTEPFNMYLKMAFIAGLFVASPFVLYQVWLFIAPGLYKRERRYVLPFMFSTVLLFLGGGV 141
Query: 115 FSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 174
F Y+++ P AL F + Y+ + +I +Y + L ++ G+ F++P++ L +G+
Sbjct: 142 FGYYMVYPNALTFLIGYSHQ-FSPMITISEYTDLFLTIILGLGIVFEMPILVFFLALMGI 200
Query: 175 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY---FGGAWMVKLTGR 230
V++ M RY ++ + AA++TP+TD + + AAP++ LY G A++V R
Sbjct: 201 VSAGWMWRNLRYSILVIFVIAAIITPTTDIMNMCVFAAPMILLYILSIGVAFLVHPKNR 259
>sp|Q8FBI6|TATC_ECOL6 Sec-independent protein translocase protein TatC OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tatC
PE=3 SV=3
Length = 258
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 62
HL ELR+R+ +++V L ++ ++ + AP+ + G + FFT
Sbjct: 12 HLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTP 71
Query: 63 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 122
+K++ L+L +PVILY++ AF+ P L + ERR + P+++ SS+LFY G+AF+Y+V+ P
Sbjct: 72 IKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFP 131
Query: 123 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 182
A F N A V+ I Y FV+ L + G+SF+VPV +LL +G+ + + +
Sbjct: 132 LAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRK 191
Query: 183 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVK 226
YV+VGA + +LTP D +Q LLA P+ L+ G + +
Sbjct: 192 KRPYVLVGAFVVGMLLTPP-DVFSQTLLAIPMYCLFEIGVFFSR 234
>sp|Q3A8D5|TATC_PELCD Sec-independent protein translocase protein TatC OS=Pelobacter
carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tatC PE=3
SV=1
Length = 250
Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 126/225 (56%), Gaps = 12/225 (5%)
Query: 2 SIFDHLEELRQRIFVSVLAVGAAILG---CFAYSKELIMFLEAPVKS---EGVRFLQLAP 55
S+ DHL+ELR+R+ + A GA +LG C+A+S++L + AP++ EG + +
Sbjct: 5 SLIDHLDELRRRLMI---AGGAWLLGALICYAFSQQLFQAVSAPLRQALPEGSSLVFIHA 61
Query: 56 GEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAF 115
E FFT +K+S GLLL PVI +++ AFV PGL +E+R P VL SS F AG F
Sbjct: 62 TEPFFTYIKLSAMAGLLLSLPVIFWQLWAFVAPGLYPSEKRLALPFVLASSGCFGAGAWF 121
Query: 116 SYWVLTPAALNFFVNYAE--GVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVG 173
+ + P F V+Y G + ++ S+ Y L+ + GL F++P++ L ++G
Sbjct: 122 GFGYVFPLVFRFLVSYGTEVGNISAMLSMGAYLSLSCRLLLAFGLVFELPILIFFLTRMG 181
Query: 174 LVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+V + R ++ A + AVLTP D V+Q+ +A P + LY
Sbjct: 182 IVDHFWLARRRRTALLLAFVVGAVLTP-PDIVSQLAIAGPFVVLY 225
>sp|P44560|TATC_HAEIN Sec-independent protein translocase protein TatC OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=tatC PE=3 SV=1
Length = 256
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 4/216 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAP---VKSEGVRFLQLAPGEFFFTT 62
HL ELR R+ V+ V + +S ++ F+ AP V +G + FFT
Sbjct: 13 HLVELRNRLLRCVICVVLVFVALVYFSNDIYHFVAAPLTAVMPKGATMIATNIQTPFFTP 72
Query: 63 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 122
+K++ + + P +LY+I AF+ P L + E+R + P++ S++LFY G+AF+Y+++ P
Sbjct: 73 IKLTAIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVAFAYYIVFP 132
Query: 123 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 182
+FF A V I Y +F L L + G+ F+VP+ +LL G+ T +
Sbjct: 133 LVFSFFTQTAPEGVTIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGITTVKALSE 192
Query: 183 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
Y++V A +LTP D +Q LLA P+ L+
Sbjct: 193 KRPYIIVAAFFIGMLLTPP-DVFSQTLLAIPMCLLF 227
>sp|O05523|TATCY_BACSU Sec-independent protein translocase protein TatCy OS=Bacillus
subtilis (strain 168) GN=tatC2 PE=1 SV=1
Length = 254
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 127/219 (57%), Gaps = 2/219 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+ +H+ ELR+R+ + LA + F +K +I++L+ +++ + + +
Sbjct: 9 MSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEAKQLTLNAFNLTDPLY 68
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
++ + G++L SPVILY++ AFV PGL ER+ + S +LF AG++FSY++L
Sbjct: 69 VFMQFAFIIGIVLTSPVILYQLWAFVSPGLYEKERKVTLSYIPVSILLFLAGLSFSYYIL 128
Query: 121 TPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 179
P ++F ++ + V + I++YF F+L L GL FQ+PVI + L ++G+VT
Sbjct: 129 FPFVVDFMKRISQDLNVNQVIGINEYFHFLLQLTIPFGLLFQMPVILMFLTRLGIVTPMF 188
Query: 180 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+ I +Y ++ AA++TP + ++ M++ PLL LY
Sbjct: 189 LAKIRKYAYFTLLVIAALITPP-ELLSHMMVTVPLLILY 226
>sp|Q9PHT8|TATC_CAMJE Sec-independent protein translocase protein TatC OS=Campylobacter
jejuni subsp. jejuni serotype O:2 (strain NCTC 11168)
GN=tatC PE=3 SV=1
Length = 245
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 119/220 (54%), Gaps = 10/220 (4%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAP---VKSEGVRFLQLAP-GEFFFT 61
HL ELR+R+F+SV + + CFA ++ L+AP V E + + + E FT
Sbjct: 8 HLIELRKRLFISVACIVVMFIVCFALRSYILDILKAPLIAVLPEVAKHVNVIEVQEALFT 67
Query: 62 TLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLT 121
+KVS + + PVI ++ FV PGL E+R + P V +S++F G F Y+V+
Sbjct: 68 AMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKRLVVPFVSFASIMFAFGACFCYFVVV 127
Query: 122 PAALNFFVNYAEGVVES---LWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSD 178
P A F +N+ G+ E + +I Y +F ++ + GL+F++PVI ++GL+
Sbjct: 128 PLAFKFLINF--GLNEDFNPVITIGTYVDFFTKVVVAFGLAFEMPVIAFFFAKIGLIDDS 185
Query: 179 QMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+ +R V+ + +A +TP D ++Q L+A PL GLY
Sbjct: 186 FLKRHFRIAVLVIFVFSAFMTPP-DVLSQFLMAGPLCGLY 224
>sp|Q3ADS0|TATC_CARHZ Sec-independent protein translocase protein TatC
OS=Carboxydothermus hydrogenoformans (strain Z-2901 /
DSM 6008) GN=tatC PE=3 SV=1
Length = 243
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 130/218 (59%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
M++F+HLE LR+ I +SV+A+ + + Y + L PV + ++ + + E F
Sbjct: 6 MTLFEHLEALRKVIIISVIAIVIGSIIAYNYVDYFLNILLQPVTALKMKLVFINVTEAFM 65
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
T LK++ G++L SP+IL++I +FV PGL AER+F+ ++ +LF AGI F+++ +
Sbjct: 66 TKLKIAIILGIILASPIILWQIWSFVAPGLKPAERKFILRMIPVIIILFVAGIVFAFFTV 125
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
A F + + ++ + +I +Y F L + GL F++PV+ +L ++ +++ + +
Sbjct: 126 FQIATRFLLQFGGDIMSPMITIGKYISFALNFLIPFGLVFELPVVVYILAKLNIISHEFL 185
Query: 181 LSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+ +Y ++ I AA LTP D ++Q+L+AAPLL LY
Sbjct: 186 VKNRKYALLVVFILAAALTPGPDVISQLLMAAPLLILY 223
>sp|P66895|TATC_MYCTU Sec-independent protein translocase protein TatC OS=Mycobacterium
tuberculosis GN=tatC PE=3 SV=1
Length = 308
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 20/233 (8%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE------------------AP 42
MS+ DHL ELR R+ +S+ A+ + F + I L+ A
Sbjct: 25 MSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSARAD 84
Query: 43 VKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPI 101
+ ++G R L AP + F LKV G++L PV Y++ AF+ PGL + ERRF
Sbjct: 85 ISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFAVAF 144
Query: 102 VLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQ 161
V+ ++VLF AG +Y VL+ AL F + V + S D+YF F+L L+ G+SF+
Sbjct: 145 VIPAAVLFVAGAVLAYLVLSK-ALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGVSFE 203
Query: 162 VPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 214
P++ ++L GL+T +++ S R ++ + AA+ TP +DP + L A L
Sbjct: 204 FPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFSMTALGAAL 256
>sp|P66896|TATC_MYCBO Sec-independent protein translocase protein TatC OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=tatC PE=3
SV=1
Length = 308
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 20/233 (8%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE------------------AP 42
MS+ DHL ELR R+ +S+ A+ + F + I L+ A
Sbjct: 25 MSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSARAD 84
Query: 43 VKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPI 101
+ ++G R L AP + F LKV G++L PV Y++ AF+ PGL + ERRF
Sbjct: 85 ISADGECRLLATAPFDQFMLRLKVGMAAGIVLACPVWFYQLWAFITPGLYQRERRFAVAF 144
Query: 102 VLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQ 161
V+ ++VLF AG +Y VL+ AL F + V + S D+YF F+L L+ G+SF+
Sbjct: 145 VIPAAVLFVAGAVLAYLVLSK-ALGFLLTVGSDVQVTALSGDRYFGFLLNLLVVFGVSFE 203
Query: 162 VPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 214
P++ ++L GL+T +++ S R ++ + AA+ TP +DP + L A L
Sbjct: 204 FPLLIVMLNLAGLLTYERLKSWRRGLIFAMFVFAAIFTPGSDPFSMTALGAAL 256
>sp|P54078|TATC_MYCLE Sec-independent protein translocase protein TatC OS=Mycobacterium
leprae (strain TN) GN=tatC PE=3 SV=2
Length = 310
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLE------------------AP 42
MS+ DHL ELR R+ +S+ A+ + F + I LE A
Sbjct: 25 MSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLESLGEWLRRPYCSLPQSARAD 84
Query: 43 VKSEG-VRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPI 101
+ +G R L AP + F +KV G++L SPV Y++ AF+ PGL ERRF
Sbjct: 85 ISPDGQCRLLATAPFDQFMLRIKVGMAAGIVLASPVWFYQLWAFITPGLYTKERRFTVAF 144
Query: 102 VLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQ 161
V+ ++VLF G +Y VL+ AL F + GV + S D+YF F+L L+ G+SF+
Sbjct: 145 VVPAAVLFAGGTVLAYLVLS-KALGFLLIVGSGVQVTALSGDRYFGFLLNLLVVFGVSFE 203
Query: 162 VPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPL 214
P++ ++L GL+T ++ S R ++ + AAV TP +DP + L A L
Sbjct: 204 FPLLIVMLNIAGLLTYQRLKSWRRGLIFAMFVFAAVFTPGSDPFSMTALGAAL 256
>sp|D5AT98|TATC_RHOCB Sec-independent protein translocase protein TatC OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=tatC PE=3 SV=1
Length = 282
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 128/246 (52%), Gaps = 23/246 (9%)
Query: 3 IFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPV------KSEGVRFLQLAPG 56
+ +HL ELR RI ++ A A++ C+ + FL P+ + + + +
Sbjct: 13 LIEHLAELRTRILYALSAYVVAVVLCYIIWHPVFTFLTHPICEALAARGQACQLSLIKLQ 72
Query: 57 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 116
E FF + ++ G L P+I +++ FV PGL R E+R P ++ S V+F+ G AF
Sbjct: 73 EGFFVAINIAMLGGFALAFPMIGFQLWRFVAPGLYRNEKRAFLPFLIASPVMFFVGAAFC 132
Query: 117 YWVLTPAALNFFVNYAEG----------------VVESLWSIDQYFEFVLVLMFSTGLSF 160
Y+++ P A +FF+ + G V+ S+++Y + + + G+ F
Sbjct: 133 YYIILPMAFSFFLGFQMGDVVAGADASDPANQMAVIGFTGSMEEYLKLTTKFVMAFGICF 192
Query: 161 QVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFG 220
Q+PV LLG+ GLV++ + S+ +Y VV + +A++TP D ++Q+++ A + LY G
Sbjct: 193 QMPVALTLLGKAGLVSAQALASVRKYAVVAMLTVSAIVTPP-DVMSQVIMFAVIYPLYEG 251
Query: 221 GAWMVK 226
++V+
Sbjct: 252 SIFLVR 257
>sp|D1BTU8|TATC_XYLCX Sec-independent protein translocase protein TatC OS=Xylanimonas
cellulosilytica (strain DSM 15894 / CECT 5975 / LMG
20990 / XIL07) GN=tatC PE=3 SV=1
Length = 276
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 119/231 (51%), Gaps = 15/231 (6%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELI------MFLEAPVKSEGVRFLQLA 54
M + +HL ELR R+ + + + + L+ + L A + + + A
Sbjct: 31 MPLREHLAELRTRLLLVAGGLVVGAVVGWLLYDPLLVLLTRPLHLAAATQHKDIALNFTA 90
Query: 55 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERR----FLGPIVLGSSVLFY 110
G T +KVS + +++ P LY++ AFV PGLTR E+R FLG V LF
Sbjct: 91 LGSPLDTRIKVSLFLAVMVTCPWWLYQVWAFVTPGLTRREKRHAYGFLGAAV----PLFL 146
Query: 111 AGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLG 170
G S+WVL P A++ F ++ + +Y FV+ L+ + G++F PV+ + L
Sbjct: 147 GGAGLSWWVL-PHAVDIFASFVPAGSSQYVNAQEYLSFVMRLVLAFGVAFVAPVLLVALN 205
Query: 171 QVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGG 221
G+V + + WR+ V+ A + AAV+TP+ D +T +L+AAP+ LYFG
Sbjct: 206 LAGIVRHETLARGWRWAVLLAFVFAAVMTPTPDALTMVLVAAPICALYFGA 256
>sp|A0RW14|TATC_CENSY Sec-independent protein translocase protein TatC OS=Cenarchaeum
symbiosum (strain A) GN=tatC PE=3 SV=1
Length = 264
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 24/254 (9%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKE-----------------------LIM 37
M HL+ELR+R V+ GA A+ E +
Sbjct: 4 MQFGKHLDELRRRALRVVVITGAVTAFLLAFHAEPAELWGATVYYPVPDPLHNMAAQITD 63
Query: 38 FLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRF 97
+ A + EGV +Q PG+ FF + ++ G+ + +PV + E+ AF+ P L +E
Sbjct: 64 HMRAALVPEGVELIQTTPGQAFFAQVYIAALVGVTVSTPVAVRELAAFLRPALRESEIHV 123
Query: 98 LGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFST 156
I + LF AG AFSY V+ P L+F E + + ++ + FVL + +
Sbjct: 124 GRSISAPAVGLFAAGCAFSYIVVIPYILDFLYKIGESAGITTFLNVMDFVSFVLQFLLAF 183
Query: 157 GLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLG 216
G+SFQ+P++ + G+V RY ++G VI A +TP VT +A P++G
Sbjct: 184 GISFQLPLVMFAVTASGMVDGRFWRRNIRYALLGIVIFGAAITPDGSGVTMWFVAGPMIG 243
Query: 217 LYFGGAWMVKLTGR 230
LYF G + + R
Sbjct: 244 LYFAGMFFAERRER 257
>sp|B2UN92|TATC_AKKM8 Sec-independent protein translocase protein TatC OS=Akkermansia
muciniphila (strain ATCC BAA-835) GN=tatC PE=3 SV=1
Length = 348
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Query: 55 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 114
PGE F T+K+S Y G+++ P++LY ++ F++PGL ER+ L + LF AG
Sbjct: 146 PGEAFMLTIKLSLYAGVVISFPLLLYFLLQFIIPGLLEHERKLLYKCMAVGFGLFLAGTL 205
Query: 115 FSYWVLTPAALNFFVNYA-EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVG 173
F Y+++ P L FF Y+ E + + W I Y F ++ GL+F++PV+ + ++G
Sbjct: 206 FCYFIVLPRVLTFFYTYSLEFGISNEWRIGYYLSFATQMILMFGLAFELPVVVMPFVKLG 265
Query: 174 LVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
++T D M S RY +V + AAV+TP+ D T ML+A P+ LY
Sbjct: 266 VLTYDMMKSTRRYAIVAIAVLAAVITPTPDVATMMLMAVPMYALY 310
>sp|P42252|TATCD_BACSU Sec-independent protein translocase protein TatCd OS=Bacillus
subtilis (strain 168) GN=tatC1 PE=1 SV=4
Length = 242
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 116/213 (54%), Gaps = 4/213 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKV 65
HLEELR+RI V++ A ++ F + +++ +L ++ + L P E + + +
Sbjct: 11 HLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWL---IRDLDGKLAVLGPSEILWVYMML 67
Query: 66 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTPAAL 125
SG C + PV Y++ FV P LT+ ER+ + G LF AGI+F Y+VL P L
Sbjct: 68 SGICAIAASIPVAAYQLWRFVAPALTKTERKVTLMYIPGLFALFLAGISFGYFVLFPIVL 127
Query: 126 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWR 185
+F + + G E++++ D+YF F++ L G F++P++ + L ++G++ ++ +
Sbjct: 128 SFLTHLSSGHFETMFTADRYFRFMVNLSLPFGFLFEMPLVVMFLTRLGILNPYRLAKARK 187
Query: 186 YVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
++ + ++TP D ++ L+ PLL L+
Sbjct: 188 LSYFLLIVVSILITPP-DFISDFLVMIPLLVLF 219
>sp|Q9Z9P4|TATC_BACHD Sec-independent protein translocase protein TatC OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=tatC PE=3 SV=1
Length = 253
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 123/231 (53%), Gaps = 2/231 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+ DH+ ELR+RI + V+ A++ F + +I +L+ ++ + +
Sbjct: 6 MSLMDHIAELRRRILIIVVFFVIALVVGFFLATPMITYLQGAPTAQDLPMNAFKLTDPLR 65
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
+ + +L P+ILY++ AFV PGL ER+ + + LF G++F+Y++L
Sbjct: 66 VYMTFAFTSAFILVFPIILYQLWAFVSPGLHENERKATLAYIPIAFFLFLGGLSFAYFIL 125
Query: 121 TPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 179
P + F AE + + L+ I++YF F+ + G+ FQ+PV+ + L ++G+VT +
Sbjct: 126 FPFLIQFIGGLAERLHINELYGINEYFTFLFQITMPFGVLFQLPVVVMFLTRLGIVTPEF 185
Query: 180 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
+ S+ +Y ++ A +TP + ++ +++ PLL LY W+ LT R
Sbjct: 186 LRSVRKYAFFVLLVVAGFITPP-ELISHLMVTVPLLLLYEFSIWVSHLTYR 235
>sp|D0KWI6|TATC_HALNC Sec-independent protein translocase protein TatC
OS=Halothiobacillus neapolitanus (strain ATCC 23641 /
c2) GN=tatC PE=3 SV=1
Length = 366
Score = 94.0 bits (232), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 4/216 (1%)
Query: 6 HLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSE---GVRFLQLAPGEFFFTT 62
HL ELR R+ VLAV L F + EL L P+ G + + FF
Sbjct: 30 HLVELRNRLLKGVLAVLVLFLILFPFRNELFTMLADPLSRHMPAGSTMIAVEVASPFFIP 89
Query: 63 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVLTP 122
LK++ + + P +LY++ AF+ PGL + ER+ + P+V S++LFY G AF+Y+V+ P
Sbjct: 90 LKLTALTAVFIAIPFLLYQLWAFIAPGLYKHERKLVAPLVFSSTILFYLGAAFAYFVVFP 149
Query: 123 AALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQMLS 182
F V I +Y FV L F+ G F+VPV +LL VG+VT D++
Sbjct: 150 VVFGFLSTAGPSDVNFAPDIGEYLSFVTSLFFAFGFVFEVPVAIVLLVIVGVVTPDKLAG 209
Query: 183 IWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
RY ++ A I AA+LTP D ++Q ++A P++ LY
Sbjct: 210 FRRYAILIAFIIAAILTP-PDVLSQFMMALPIIMLY 244
>sp|Q9ZCG6|TATC_RICPR Sec-independent protein translocase protein TatC OS=Rickettsia
prowazekii (strain Madrid E) GN=tatC PE=3 SV=1
Length = 251
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 119/227 (52%), Gaps = 19/227 (8%)
Query: 5 DHLEELR---QRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVR-FLQLAPGE 57
+HL E + RIF + + + A C+ +S + FL P+ + VR + E
Sbjct: 8 EHLLEFKIRLLRIFTAFIIIFAI---CYYFSDYIYSFLLEPLAKLSGDTVRNIIYTGLTE 64
Query: 58 FFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSY 117
FFT +K+S + + P+I E F+ PGL R E++ + I+ S +LF+ G F +
Sbjct: 65 AFFTYIKLSAFTAFTIIIPIIALECYLFISPGLYRHEKKIIAFILFMSPILFWCGSIFVF 124
Query: 118 WVLTPAALNFFVNYAEG------VVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQ 171
+ + P A NFF+++ + ++E+ I +Y V+ L+ + G++FQ+P++ ++L
Sbjct: 125 YFVMPKAWNFFLSFEKRDMIVPIILEA--RISEYLNLVIHLIIAFGIAFQLPIVIIVLNI 182
Query: 172 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+ +V + + R VV I A +LTP D ++Q LA PLL LY
Sbjct: 183 LKIVKTQTLKKKRRIAVVINFIIAGILTPP-DILSQFALAIPLLLLY 228
>sp|O21266|YMF16_RECAM Uncharacterized tatC-like protein ymf16 OS=Reclinomonas americana
GN=YMF16 PE=3 SV=1
Length = 260
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
+ I HL E+R RI + ++ + Y +E+ L P+ F+ E F
Sbjct: 5 IPILTHLYEIRLRIIYLLYSIFLTCFCSYQYKEEIFYLLFIPLSKN---FIYTDLIEAFI 61
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
T +K+S G+ L P+ LY+I +F++PG E++ + L S L++ G Y++L
Sbjct: 62 TYIKLSIIVGIYLSYPIFLYQIWSFLIPGFFLYEKKLFRLLCLTSIFLYFLGSCIGYYLL 121
Query: 121 TPAALNFFVNYAEGVVESLWSID---QYFEFVLV---LMFSTGLSFQVPVIQLLLGQVGL 174
P A FF+ + + + L++I+ + E++++ L+FS + FQ+PV+ L L ++
Sbjct: 122 FPIAFTFFLGFQKLGKDQLFTIELQAKIHEYLILNTKLIFSLSICFQLPVLILFLFKIYP 181
Query: 175 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFGGAWMVKLTGR 230
T ++ R++ + I AA+L+P D ++Q +L PL+ + + +KL +
Sbjct: 182 KTYLWLIHKRRFIYLFFFILAAILSPP-DILSQFILVIPLILFFEISLFCIKLIQK 236
>sp|Q92ES8|TATC_LISIN Sec-independent protein translocase protein TatC OS=Listeria
innocua serovar 6a (strain CLIP 11262) GN=tatC PE=3 SV=1
Length = 247
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 121/219 (55%), Gaps = 2/219 (0%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+ HL+ELR R+ + +L+ A SK LI+FL+ + V + F
Sbjct: 6 MSLTGHLKELRTRLLIILLSFFLAFFVGLFVSKPLILFLQKDDLPKEVILHVFKVTDAFQ 65
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
++++ GL+L PVILY++ AFV PGL +E+R + + +LF G+ FSY +
Sbjct: 66 IYIEMAFIIGLILVFPVILYQLWAFVKPGLHASEQRITLRYIPITFLLFLCGVVFSYVIT 125
Query: 121 TPAALNFFVNYAEGV-VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQ 179
P L F +A + VE+ + YF+F+L ++ S G+ F++P++ +LL ++ L+T +
Sbjct: 126 FPFILKFMFQFAAELGVETTIGLATYFQFLLQIVLSFGVLFELPMVIMLLTRLSLITPNG 185
Query: 180 MLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
M +Y +I AA + P + ++ +++ PL+GLY
Sbjct: 186 MRRARKYAYFCLLIIAAFIAPP-EILSHLMITIPLIGLY 223
>sp|Q2J9S4|TATC_FRASC Sec-independent protein translocase protein TatC OS=Frankia sp.
(strain CcI3) GN=tatC PE=3 SV=1
Length = 364
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 122/232 (52%), Gaps = 15/232 (6%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS--EGVRFLQ--LAPG 56
M + +HL ELR R+ +++LA A + CF + + +L+AP RF LA
Sbjct: 27 MPLTEHLRELRNRVAIALLAFAIAGVVCFIFEPRIFDWLKAPYCDLPASKRFSPDGLAAN 86
Query: 57 E---FFF-------TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSS 106
+ +FF LK+S +++ SPV LY++ +F+ PGL R ERR+ V S
Sbjct: 87 DCTLYFFGILDAFTIRLKISMIAAVVVSSPVWLYQLWSFITPGLHRHERRWSLTFVGVSL 146
Query: 107 VLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ 166
VLF G F+Y L+ G+V S+ ++Y +V ++ GLSF+VP++
Sbjct: 147 VLFATGAVFAYLTLSTGLGLLLGFGGNGLV-SVLDGNRYLSYVQAMLLIFGLSFEVPLLV 205
Query: 167 LLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
++L G+V++ ++ S R + + AAV+TPS DP T + L P++ LY
Sbjct: 206 MMLNLAGIVSTAKLRSWRRPEIFLVFVFAAVVTPSQDPFTMLALGLPMVLLY 257
>sp|C4LIK6|TATC_CORK4 Sec-independent protein translocase protein TatC OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tatC
PE=3 SV=1
Length = 414
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 1/158 (0%)
Query: 49 RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVL 108
R L +P E F +K+ G GL++ P+ L EI F+ PGL + ERR+ + + L
Sbjct: 102 RLLATSPFEMFMLRMKMGGLAGLVMACPIWLIEIWRFITPGLLKNERRWTLSVGTIAGFL 161
Query: 109 FYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLL 168
F G+ +Y VL P L+ ++ + S + ++YF FV+ L+ GLSF+VP+ +
Sbjct: 162 FVLGVVAAYLVL-PMGLDVLLHLGDSTQISALTGEKYFNFVIALILVFGLSFEVPLFTAM 220
Query: 169 LGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVT 206
L G+V +Q+ R ++V I AA+ TP DP++
Sbjct: 221 LNLAGVVHYEQLKDKRRIMIVVIFIFAAIATPGQDPIS 258
>sp|D4GZD0|TATCO_HALVD Sec-independent protein translocase protein TatCo OS=Haloferax
volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC
14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tatCo PE=3
SV=1
Length = 441
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEA--------PVKSEGVRFL- 51
M + H+EE+ +R+ V + GA L F + L ++ P ++ + FL
Sbjct: 187 MPLTAHIEEMIRRLAVVLGVAGAITLVLFPGADILNALVDTQAAFGVHIPSATDVINFLW 246
Query: 52 -QLAPG---------------EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 95
PG E T LKV+G G ++G PV +YE F+ PGL ER
Sbjct: 247 NSHIPGAETIVDRRPRLYGPLELILTKLKVAGLAGTVIGLPVFVYETYLFMRPGLYPKER 306
Query: 96 RFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFS 155
++ V S VL G+ F+++V+ PA +F +Y EG + + + F +L+LM
Sbjct: 307 KYYLAAVPTSLVLALVGVLFAHFVVLPAIFAYFTSYTEGTAVVAFGLKETFNLILILMGY 366
Query: 156 TGLSFQVPVIQLLLGQVGLVT----SDQMLSIWRYVVVGAVIAAAVLTPSTDP--VTQML 209
+ FQ+P+ L + LVT D+ L W GA + A L S DP + ++
Sbjct: 367 MAVVFQIPLFVELAIMMNLVTRRWLEDRRLLFW-----GAFLGLAFLV-SPDPTGMAPII 420
Query: 210 LAAPLLGLYFGGAWMVKLTGR 230
+ A ++ L+ G ++ TG
Sbjct: 421 IGATMITLFEGTLAALRWTGN 441
>sp|D2NT99|TATC_ROTMD Sec-independent protein translocase protein TatC OS=Rothia
mucilaginosa (strain DY-18) GN=tatC PE=3 SV=1
Length = 293
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 14/241 (5%)
Query: 1 MSIFDHLEELRQR-IFVSVLAVGAAILGCFAYSKELIMFLEAPVKS---EGVRFLQLAPG 56
M + +HL E R R I ++ + AAI+G + I + AP++ E R L G
Sbjct: 19 MELKEHLREFRDRLIKAAIATIIAAIIGTVFLYQPFIEMISAPLQQINIETGRRANLNYG 78
Query: 57 EF---FFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGI 113
F LKV Y GL++ SPV LY+ + F+LP L E+++L + S F G+
Sbjct: 79 SVASPFDQLLKVGMYIGLVIASPVWLYQALRFLLPALHTKEKKYLFGFLTASIFAFACGV 138
Query: 114 AFSYWVLTPAALNFFVNYAEGVVESLWSIDQ--YFEFVLVLMFSTGLSFQVPVIQLLLGQ 171
A SY+ L P + + + V ES + ID Y F+L + + +F +PVI + +
Sbjct: 139 AISYFTL-PGVVYALLKFTP-VNESNY-IDAGVYISFILKFVVTFSCAFIIPVILVGINM 195
Query: 172 VGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLYFG--GAWMVKLTG 229
+GL+ +L WR+VVV + AA+ P +D + +L APLL +F G M+
Sbjct: 196 LGLIRGKTILKSWRWVVVLVAVIAALTAPGSDIMMMFVLMAPLLIFFFAAIGICMINDKR 255
Query: 230 R 230
R
Sbjct: 256 R 256
>sp|Q0W5V8|TATC_UNCMA Sec-independent protein translocase protein TatC OS=Uncultured
methanogenic archaeon RC-I GN=tatC PE=3 SV=1
Length = 241
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFF 60
MS+ +HL ELR R+ + + +L F +S L+ + A V+ AP E F
Sbjct: 14 MSLSEHLRELRNRLIIVIAVTLLLMLAIFPFSAGLVDAVLAHAVPSYVKITTYAPMEMFK 73
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
L + + +G P+++YE F PGL E+RFL + S +LF AG +Y+V
Sbjct: 74 ARLTMCFIGAITVGFPLLVYEAFRFAAPGLYPHEKRFLYLVFPFSLLLFVAGGLVAYFVT 133
Query: 121 TPAALNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVTSDQM 180
P + + + V S+ + F V + GL FQVP+I +L ++GLV + +
Sbjct: 134 LPLFFSIVIGHGLEVAAPALSVGETFSIVTNFVAGLGLVFQVPLIIVLAIKMGLVKRETL 193
Query: 181 LS 182
+
Sbjct: 194 VK 195
>sp|D0J948|TATC_BLASP Sec-independent protein translocase protein TatC OS=Blattabacterium
sp. subsp. Periplaneta americana (strain BPLAN) GN=tatC
PE=3 SV=1
Length = 266
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 1 MSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIM--FLEAPVKSEGV---------R 49
M ++H+EELR+ + SV A+ A + +K +I L P K++ + +
Sbjct: 8 MPFWEHIEELRKHLIHSVCAMIIATI-ILMNNKNVIFDYILFGPAKTDFITYRLFHKLGK 66
Query: 50 FLQLAPGEFFF--TTLKVSGY------------C---GLLLGSPVILYEIIAFVLPGLTR 92
+ F+F L++ C G +L P I YE F+ P L+
Sbjct: 67 IFHRSHHSFYFFSHNLEIQNRQIFGQFNIYVWTCFIGGFILSFPYIFYEFWKFIKPALSD 126
Query: 93 AERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNF-FVNYAEGVVESLWSIDQYFEFVLV 151
ER++ I++ + LF G+ F Y++L P ++F + +++ + Y ++
Sbjct: 127 EERKYSRGIIMMVTFLFILGVLFGYFILCPFLIHFGYTFRISSFPRNIFDLSDYISLIMH 186
Query: 152 LMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLA 211
+ S G++F P+ L ++ L++ + ++ + +I A+ +TP D + +++
Sbjct: 187 SILSMGITFLFPIFIYFLTKIELISYPFLKKYRKHAFLILLILASAITPG-DIFSTIVVL 245
Query: 212 APLLGLY 218
PL+ LY
Sbjct: 246 IPLMILY 252
>sp|D4GZC9|TATCT_HALVD Sec-independent protein translocase protein TatCt OS=Haloferax
volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC
14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=tatCt PE=3
SV=1
Length = 718
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 108 LFYAGIAFSYWVLTPAALNFFVNYA--EGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVI 165
LF AG+A+ Y+V P F A G S +SI ++ +F+ +L S GL+ Q+P+
Sbjct: 137 LFAAGVAYGYFVFFPFTFAFLAQNAISAGFTPS-YSIVKWAQFIFLLTLSFGLASQLPLA 195
Query: 166 QLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
L +V + WR+ +VG A+ TP DP TQ++ A P++ LY
Sbjct: 196 MTGLSYAEVVPYELFRDKWRHAIVGIFAFGALFTPP-DPFTQIMWAVPVILLY 247
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 15/188 (7%)
Query: 39 LEAPVKSEGV-RFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLT-----R 92
L A V+ E V + L P E +K S +L P++ Y FV P L R
Sbjct: 512 LPAAVRPEEVLNVVALHPMEALIFEVKFSTILAVLATLPLVAY----FVWPALRERNIIR 567
Query: 93 AERRFLGPIVLGSSVLFYAGIAFSYWVLTPAALNFFVNYAEGVVESL-WSIDQYFEFVLV 151
RR + + G A Y + P + F V A + + I +F +
Sbjct: 568 KRRRTVFVWTGALAGGLLGGFALGYTYVAPTVITFLVEDALAANMIITYRITNFFWLIFF 627
Query: 152 LMFSTGLSFQVPVIQLLLGQVGLVTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLA 211
GL VP++ +LL G ++ M + WR V V + +AV TP++ +T M +
Sbjct: 628 TTAGIGLLADVPILMVLLNTAG-ISYRMMRNRWREVTVFILAISAVFTPAS--ITTMFMV 684
Query: 212 A-PLLGLY 218
PL+ Y
Sbjct: 685 TLPLMAAY 692
>sp|Q9TC94|YMF16_NEPOL Uncharacterized tatC-like protein ymf16 OS=Nephroselmis olivacea
GN=YMF16 PE=3 SV=1
Length = 247
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 5 DHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKS----EGVRFLQLAPGEFFF 60
H E++ R + C YS+ ++ F P+ + +G + E F
Sbjct: 7 QHFNEIKYRFLYIFFTFLLCFIICTIYSESIMFFYVHPLINLTSMQGKHLIFTEMSEAFH 66
Query: 61 TTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYWVL 120
T + + + + P Y+ AF +P + ER L + L + Y+++
Sbjct: 67 TYIFLCFFTSIYCTFPYFFYQFWAFFIPSTYQFERLQLRFLSFFFFTLLFFSCIIIYFII 126
Query: 121 TPAALNFFVNYAEGV------VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGL 174
P +FF+++ + +E+ I Y +F + + FQ P+ + L
Sbjct: 127 LPEIWSFFLHFEKKSYYFNLQLEA--RISSYIQFTFQIFSYFFVLFQCPLFTHFSLNLNL 184
Query: 175 VTSDQMLSIWRYVVVGAVIAAAVLTPSTDPVTQMLLAAPLLGLY 218
+T +++ +Y+ +I AA L+P D ++Q L + ++ +Y
Sbjct: 185 LTISFLVNSRKYIYFLFLILAAFLSPP-DILSQFFLFSLIVFMY 227
>sp|O31777|BIOF1_BACSU 8-amino-7-oxononanoate synthase 1 OS=Bacillus subtilis (strain 168)
GN=kbl PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 136 VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGLVT--SDQMLS 182
+E LW YF+ +LV M T + P++ +L+G G+ SDQ+LS
Sbjct: 294 MERLWENTAYFKAMLVKMGLTLTKSETPILPILIGDEGVAKQFSDQLLS 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.144 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,781,001
Number of Sequences: 539616
Number of extensions: 3263329
Number of successful extensions: 9753
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 9604
Number of HSP's gapped (non-prelim): 108
length of query: 230
length of database: 191,569,459
effective HSP length: 114
effective length of query: 116
effective length of database: 130,053,235
effective search space: 15086175260
effective search space used: 15086175260
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)