BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>026981
MGKYMRKAKTAAGEVAVMEVTQSSPLGVRTRAKTLALQKATSAGAGGSGSYLQLRSRRLE
KPAALVNETSGRRRRRRKENSRARERSRGKKNVDEVEEEKETDDVAATAVEVEEEEENGN
KNLDIEASFGENALESEARERGTRESTPCSLIRDPEIIRTPGSSNRPTSSMQNREAQISA
CSLIPTAHEMDKFFADTEEEQQRQFIEKYNYDPVNDKPLPGHFKWQKVDP
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with KRP4 KRP4 KRP4 AT2G32710	protein from Arabidopsis thaliana	3.4e-38
BLAST match view associations BLAST with ICK3 ICK3 ICK3 AT3G24810	protein from Arabidopsis thaliana	2.8e-20
BLAST match view associations BLAST with ICK5 ICK5 ICK5 AT1G49620	protein from Arabidopsis thaliana	4.7e-09
BLAST match view associations BLAST with KRP6 KRP6 KRP6 AT3G19150	protein from Arabidopsis thaliana	7.6e-09
BLAST match view associations BLAST with ICK1 ICK1 ICK1	protein from Arabidopsis thaliana	1.9e-06
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026981
        (230 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046427 - symbol:KRP4 "KIP-RELATED PROTEIN 4" ...   285  3.4e-38   4
TAIR|locus:2087248 - symbol:ICK3 species:3702 "Arabidopsi...   142  2.8e-20   2
TAIR|locus:2012186 - symbol:ICK5 species:3702 "Arabidopsi...   134  4.7e-09   1
TAIR|locus:2094118 - symbol:KRP6 "KIP-related protein 6" ...   132  7.6e-09   1
TAIR|locus:2046778 - symbol:ICK1 species:3702 "Arabidopsi...   109  1.9e-06   2


>TAIR|locus:2046427 [details] [associations]
            symbol:KRP4 "KIP-RELATED PROTEIN 4" species:3702
            "Arabidopsis thaliana" [GO:0004861 "cyclin-dependent protein
            serine/threonine kinase inhibitor activity" evidence=IEA;TAS]
            [GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0007050 "cell cycle
            arrest" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IPI]
            [GO:0045736 "negative regulation of cyclin-dependent protein
            serine/threonine kinase activity" evidence=RCA;IDA;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045786 "negative regulation of
            cell cycle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0000956
            "nuclear-transcribed mRNA catabolic process" evidence=RCA]
            [GO:0010440 "stomatal lineage progression" evidence=RCA]
            [GO:0042023 "DNA endoreduplication" evidence=RCA]
            InterPro:IPR003175 Pfam:PF02234 GO:GO:0005634 GO:GO:0005737
            GO:GO:0005654 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0007050
            GO:GO:0045736 EMBL:AC003974 GO:GO:0004861 InterPro:IPR016701
            PIRSF:PIRSF017811 HOGENOM:HOG000239712 EMBL:AJ301555 EMBL:AF123315
            EMBL:AK117586 IPI:IPI00546019 IPI:IPI00547779 PIR:T00797
            RefSeq:NP_565750.1 RefSeq:NP_850196.1 UniGene:At.19476
            ProteinModelPortal:Q8GYJ3 SMR:Q8GYJ3 IntAct:Q8GYJ3 STRING:Q8GYJ3
            PaxDb:Q8GYJ3 PRIDE:Q8GYJ3 EnsemblPlants:AT2G32710.1 GeneID:817831
            KEGG:ath:AT2G32710 GeneFarm:3416 TAIR:At2g32710 eggNOG:NOG254190
            InParanoid:Q8GYJ3 OMA:LINSEMI PhylomeDB:Q8GYJ3
            ProtClustDB:CLSN2688640 Genevestigator:Q8GYJ3 Uniprot:Q8GYJ3
        Length = 289

 Score = 285 (105.4 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
 Identities = 63/113 (55%), Positives = 76/113 (67%)

Query:   126 EASFGENA--LESEARE---RGTRESTPCSLIRDPEIIRTPGSS---NRPTSSMQNREAQ 177
             + +FG+N   LE E  +   R TRESTPCSLIR PEI+ TPGSS   N   S    RE  
Sbjct:   176 DPTFGQNFFDLEEEHTQSFNRTTRESTPCSLIRRPEIMTTPGSSTKLNICVSESNQREDS 235

Query:   178 ISACSLI-PTAHEMDKFFADTEEEQQRQFIEKYNYDPVNDKPLPGHFKWQKVD 229
             +S      PT  EMD+FF+  EEEQQ+QFIEKYN+DPVN++PLPG F+W KVD
Sbjct:   236 LSRSHRRRPTTPEMDEFFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKVD 288

 Score = 64 (27.6 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query:    15 VAVMEV---TQSSPLGVRTRAKTLALQK 39
             +A+M+V   + SS LGV TRAK+LALQ+
Sbjct:    31 IALMDVVSPSSSSSLGVLTRAKSLALQQ 58

 Score = 53 (23.7 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
 Identities = 11/16 (68%), Positives = 13/16 (81%)

Query:    51 YLQLRSRRLEKPAALV 66
             YLQLRSRRL+K   +V
Sbjct:   102 YLQLRSRRLQKKPPIV 117

 Score = 40 (19.1 bits), Expect = 3.4e-38, Sum P(4) = 3.4e-38
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query:     1 MGKYMRKAK 9
             MGKY+RK+K
Sbjct:     1 MGKYIRKSK 9


>TAIR|locus:2087248 [details] [associations]
            symbol:ICK3 species:3702 "Arabidopsis thaliana"
            [GO:0004861 "cyclin-dependent protein serine/threonine kinase
            inhibitor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA;ISS] [GO:0007050 "cell cycle arrest"
            evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0045736 "negative regulation of cyclin-dependent protein
            serine/threonine kinase activity" evidence=RCA;IDA] [GO:0000278
            "mitotic cell cycle" evidence=RCA] [GO:0010440 "stomatal lineage
            progression" evidence=RCA] [GO:0042023 "DNA endoreduplication"
            evidence=RCA] InterPro:IPR003175 Pfam:PF02234 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0007050 GO:GO:0045736
            GO:GO:0004861 PANTHER:PTHR10265 EMBL:AB028609 InterPro:IPR016701
            PIRSF:PIRSF017811 HOGENOM:HOG000239712 EMBL:AJ301556 EMBL:BT025751
            EMBL:AK228811 IPI:IPI00517011 RefSeq:NP_189125.1 UniGene:At.24756
            ProteinModelPortal:Q9LRY0 SMR:Q9LRY0 IntAct:Q9LRY0 STRING:Q9LRY0
            EnsemblPlants:AT3G24810.1 GeneID:822079 KEGG:ath:AT3G24810
            GeneFarm:3417 TAIR:At3g24810 eggNOG:NOG248018 OMA:ESENRSM
            PhylomeDB:Q9LRY0 ProtClustDB:CLSN2915348 Genevestigator:Q9LRY0
            Uniprot:Q9LRY0
        Length = 189

 Score = 142 (55.0 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
 Identities = 29/59 (49%), Positives = 41/59 (69%)

Query:   172 QNREAQISACSLIPTAHEMDKFFADTEEEQQRQFIEKYNYDPVNDKPLPGHFKWQKVDP 230
             +NR + IS    I +  E++ FFA  E++QQR FI+KYN+D V+D PLPG ++W KV P
Sbjct:   134 ENR-SMISDSKSIQS--EIEDFFASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKVMP 189

 Score = 112 (44.5 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
 Identities = 32/71 (45%), Positives = 39/71 (54%)

Query:     1 MGKYMRKAKTAAGEVAVMEVTQSSPLGVRTRA---KTLALQKXXXXXXXXXXX-YLQLRS 56
             MGKY++K+K A G V+V + +    LG RTRA   K LAL +            YLQLRS
Sbjct:     1 MGKYIKKSKVA-GAVSVKDKSHPPALGFRTRAAAAKNLALHRLRSHSDEADSFNYLQLRS 59

Query:    57 RRLEKPAALVN 67
             RRL K   L N
Sbjct:    60 RRLVKLPLLTN 70


>TAIR|locus:2012186 [details] [associations]
            symbol:ICK5 species:3702 "Arabidopsis thaliana"
            [GO:0004861 "cyclin-dependent protein serine/threonine kinase
            inhibitor activity" evidence=IEA;TAS] [GO:0005634 "nucleus"
            evidence=ISM;IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
            [GO:0030332 "cyclin binding" evidence=IPI] [GO:0045736 "negative
            regulation of cyclin-dependent protein serine/threonine kinase
            activity" evidence=RCA;IDA;TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0001673 "male germ cell nucleus" evidence=IDA]
            [GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0010440
            "stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
            endoreduplication" evidence=RCA] InterPro:IPR003175 Pfam:PF02234
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005654 GO:GO:0007050
            GO:GO:0001673 GO:GO:0045736 EMBL:AC011807 GO:GO:0004861
            PANTHER:PTHR10265 InterPro:IPR016701 PIRSF:PIRSF017811
            HOGENOM:HOG000294228 EMBL:AJ301558 IPI:IPI00535800 PIR:H96532
            RefSeq:NP_175385.1 UniGene:At.10456 ProteinModelPortal:Q94CL9
            SMR:Q94CL9 IntAct:Q94CL9 STRING:Q94CL9 EnsemblPlants:AT1G49620.1
            GeneID:841386 KEGG:ath:AT1G49620 GeneFarm:3419 TAIR:At1g49620
            eggNOG:NOG248457 InParanoid:Q94CL9 OMA:TNEIATR PhylomeDB:Q94CL9
            ProtClustDB:CLSN2913617 Genevestigator:Q94CL9 Uniprot:Q94CL9
        Length = 195

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 23/46 (50%), Positives = 31/46 (67%)

Query:   185 PTAHEMDKFFADTEEEQQRQFIEKYNYDPVNDKPLPGHFKWQKVDP 230
             PT  E+D FF+  E  +Q++F EKYNYD VND PL G ++W  + P
Sbjct:   150 PTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLKP 195


>TAIR|locus:2094118 [details] [associations]
            symbol:KRP6 "KIP-related protein 6" species:3702
            "Arabidopsis thaliana" [GO:0004861 "cyclin-dependent protein
            serine/threonine kinase inhibitor activity" evidence=IEA;TAS]
            [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0007050 "cell cycle
            arrest" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IPI]
            [GO:0042023 "DNA endoreduplication" evidence=IMP] [GO:0045736
            "negative regulation of cyclin-dependent protein serine/threonine
            kinase activity" evidence=IDA;TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0001673 "male germ cell nucleus" evidence=IDA]
            InterPro:IPR003175 Pfam:PF02234 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0007050 EMBL:AP000419
            GO:GO:0001673 GO:GO:0045736 GO:GO:0004861 PANTHER:PTHR10265
            InterPro:IPR016701 PIRSF:PIRSF017811 EMBL:AJ301557 EMBL:AF106705
            EMBL:AF208692 EMBL:BX826140 EMBL:AK229307 IPI:IPI00518942
            IPI:IPI00528938 RefSeq:NP_188546.1 RefSeq:NP_974338.1
            UniGene:At.8228 ProteinModelPortal:Q0WNX9 SMR:Q0WNX9 IntAct:Q0WNX9
            STRING:Q0WNX9 EnsemblPlants:AT3G19150.1 GeneID:821449
            KEGG:ath:AT3G19150 GeneFarm:3418 TAIR:At3g19150 eggNOG:NOG281108
            HOGENOM:HOG000294228 InParanoid:Q0WNX9 OMA:NDEPLEG PhylomeDB:Q0WNX9
            ProtClustDB:CLSN2684556 Genevestigator:Q0WNX9 Uniprot:Q0WNX9
        Length = 196

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 35/107 (32%), Positives = 56/107 (52%)

Query:   127 ASFGENALESEARERGTRESTPCSLIRDPEIIRTPGSSNRPTSSMQNREA---QISACSL 183
             +SFG + LE    E  T  ST  +     E           T+ M++  A   +      
Sbjct:    91 SSFGVD-LEDHQIETETETSTFITSNFRKETSPVSEGLGETTTEMESSSATKRKQPGVRK 149

Query:   184 IPTAHEMDKFFADTE--EEQQRQFIEKYNYDPVNDKPLPGHFKWQKV 228
              PTA E++  F++ E  +++++QFIEKYN+D VND+PL G +KW ++
Sbjct:   150 TPTAAEIEDLFSELESQDDKKKQFIEKYNFDIVNDEPLEGRYKWDRL 196


>TAIR|locus:2046778 [details] [associations]
            symbol:ICK1 species:3702 "Arabidopsis thaliana"
            [GO:0004861 "cyclin-dependent protein serine/threonine kinase
            inhibitor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IEA;IDA] [GO:0007050 "cell cycle arrest" evidence=IEA]
            [GO:0010102 "lateral root morphogenesis" evidence=NAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0045740 "positive regulation of
            DNA replication" evidence=IMP] [GO:0045736 "negative regulation of
            cyclin-dependent protein serine/threonine kinase activity"
            evidence=ISS;RCA;IDA] [GO:0000082 "G1/S transition of mitotic cell
            cycle" evidence=TAS] [GO:0010311 "lateral root formation"
            evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
            [GO:0048367 "shoot system development" evidence=IMP] [GO:0048527
            "lateral root development" evidence=IMP] [GO:0000278 "mitotic cell
            cycle" evidence=RCA] [GO:0010440 "stomatal lineage progression"
            evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
            InterPro:IPR003175 Pfam:PF02234 EMBL:AC003040 GO:GO:0009737
            GO:GO:0005634 GO:GO:0005654 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0000082 GO:GO:0007050 GO:GO:0010311 GO:GO:0048366
            GO:GO:0045736 GO:GO:0045740 GO:GO:0004861 PANTHER:PTHR10265
            EMBL:U94772 EMBL:AF079587 EMBL:AK175492 EMBL:AK176575 EMBL:BT028986
            EMBL:AY085749 IPI:IPI00548875 PIR:T01132 RefSeq:NP_179924.1
            UniGene:At.24577 ProteinModelPortal:Q67Y93 SMR:Q67Y93 IntAct:Q67Y93
            STRING:Q67Y93 EnsemblPlants:AT2G23430.1 GeneID:816875
            KEGG:ath:AT2G23430 GeneFarm:3408 TAIR:At2g23430 eggNOG:NOG273654
            HOGENOM:HOG000113262 InParanoid:Q67Y93 OMA:RSRRIVY
            ProtClustDB:CLSN2913303 Genevestigator:Q67Y93 InterPro:IPR016701
            PIRSF:PIRSF017811 Uniprot:Q67Y93
        Length = 191

 Score = 109 (43.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 17/46 (36%), Positives = 32/46 (69%)

Query:   184 IPTAHEMDKFFADTEEEQQRQFIEKYNYDPVNDKPLPGHFKWQKVD 229
             +PT  E++ FF + E++ + +F +KYN+D   +KPL G ++W K++
Sbjct:   146 MPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKLE 191

 Score = 39 (18.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query:    51 YLQLRSRRL 59
             Y+QLRSRR+
Sbjct:    20 YMQLRSRRI 28


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.128   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      230       170   0.00086  108 3  11 23  0.46    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  575 (61 KB)
  Total size of DFA:  140 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.80u 0.12s 15.92t   Elapsed:  00:00:00
  Total cpu time:  15.80u 0.12s 15.92t   Elapsed:  00:00:01
  Start:  Thu May  9 17:10:37 2013   End:  Thu May  9 17:10:38 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
