Query         026983
Match_columns 230
No_of_seqs    121 out of 1265
Neff          8.3 
Searched_HMMs 29240
Date          Mon Mar 25 04:43:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026983.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026983hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2p8e_A PPM1B beta isoform vari 100.0 3.8E-39 1.3E-43  277.8  20.1  186   12-201   115-300 (307)
  2 2i0o_A Ser/Thr phosphatase; be 100.0 2.8E-38 9.7E-43  272.0  19.1  174   26-199   127-304 (304)
  3 1a6q_A Phosphatase 2C; catalyt 100.0 1.2E-37 3.9E-42  276.0  17.6  172   26-201   122-294 (382)
  4 3qn1_B Protein phosphatase 2C  100.0 1.6E-35 5.4E-40  258.4  19.1  165   25-202   147-331 (337)
  5 2iq1_A Protein phosphatase 2C  100.0 1.3E-35 4.5E-40  251.8  17.7  163   26-204    98-267 (274)
  6 2irm_A Mitogen-activated prote 100.0 3.9E-36 1.3E-40  264.2  13.7  174   27-201   151-358 (358)
  7 3kdj_B Protein phosphatase 2C  100.0 1.9E-35 6.5E-40  255.7  17.5  164   27-204   120-310 (316)
  8 3d8k_A PP2C, protein phosphata 100.0   7E-35 2.4E-39  257.7  19.5  157   41-202   166-327 (377)
  9 2j4o_A Mitogen-activated prote 100.0 9.1E-36 3.1E-40  265.5  10.8  177   28-204   163-371 (401)
 10 2i44_A Serine-threonine phosph 100.0 5.4E-35 1.9E-39  253.4  15.3  167   28-200   137-322 (324)
 11 2isn_A NYSGXRC-8828Z, phosphat 100.0 2.1E-34 7.2E-39  253.6  18.7  157   41-202   173-336 (364)
 12 4da1_A Protein phosphatase 1K, 100.0 2.6E-34 8.7E-39  255.2  16.8  163   26-204   212-381 (389)
 13 2pnq_A [pyruvate dehydrogenase 100.0 6.6E-34 2.3E-38  257.5  15.5  174   27-200   197-456 (467)
 14 2pk0_A Serine/threonine protei 100.0 6.3E-32 2.2E-36  225.5  10.3  147   26-200    99-247 (250)
 15 2j82_A TPPHA, protein serine-t 100.0 1.1E-30 3.9E-35  216.5  13.9  160   12-198    79-240 (240)
 16 1txo_A Putative bacterial enzy 100.0 8.2E-31 2.8E-35  217.1  10.9  145   27-199    92-236 (237)
 17 3rnr_A Stage II sporulation E  100.0 1.4E-31 4.8E-36  218.9   4.7  158    7-198    48-211 (211)
 18 2jfr_A Ser-Thr phosphatase MSP 100.0 1.8E-30 6.1E-35  214.7  10.3  141   29-198    88-233 (234)
 19 3t91_A Stage II sporulation pr  99.8 1.3E-17 4.5E-22  138.1  16.5  146    5-203    72-224 (242)
 20 3pu9_A Protein serine/threonin  99.7 2.1E-16   7E-21  131.3  14.9  143    5-201    75-226 (242)
 21 3f79_A Probable two-component   99.6 4.5E-15 1.5E-19  123.8  13.0  136    5-199   108-253 (255)
 22 3zt9_A Serine phosphatase; hyd  99.5 1.1E-13 3.7E-18  111.0  13.1  127    5-197    65-193 (193)
 23 3ke6_A Protein RV1364C/MT1410;  99.1 3.4E-09 1.2E-13   93.9  15.6  142    5-201   100-259 (399)
 24 3eq2_A Probable two-component   98.5   1E-06 3.5E-11   77.3  12.1  137    4-199   246-392 (394)
 25 3c4z_A Rhodopsin kinase; Ser/T  42.4    0.72 2.5E-05   41.9  -5.8   81   96-198    43-134 (543)
 26 1hq0_A CNF1, cytotoxic necroti  30.0      53  0.0018   27.1   4.0   27   25-52    141-167 (295)
 27 2ww6_A Fibritin, T4 fibritin;   29.1      43  0.0015   17.2   2.1   16   50-65      9-24  (27)
 28 2krx_A ASL3597 protein; struct  23.1 1.8E+02  0.0062   19.7   5.3   51  132-182     8-70  (94)

No 1  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=3.8e-39  Score=277.83  Aligned_cols=186  Identities=38%  Similarity=0.621  Sum_probs=163.3

Q ss_pred             HHHHHhcCCCCCCCCCCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEeccc
Q 026983           12 LINRLLIGPHSDFHGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRV   91 (230)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~~~   91 (230)
                      +.+.+.+..........+|||++++++.++++|+||+||||+|++++|++.+||+||++.++.|+.|+...|+.+...|+
T Consensus       115 ~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~rI~~~gg~v~~~rv  194 (307)
T 2p8e_A          115 IDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRV  194 (307)
T ss_dssp             HHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEE
T ss_pred             HHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHHHHHHcCCEEEeCcc
Confidence            33444444333333457999999999999999999999999999999999999999999999999999999999888888


Q ss_pred             CCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHH
Q 026983           92 NGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVIC  171 (230)
Q Consensus        92 ~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a  171 (230)
                      +|.+.+||+||+..+|.....++..|.+.++|++..+++.++|.||||||||||++++++++.+++...+....+++++|
T Consensus       195 ~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a  274 (307)
T 2p8e_A          195 NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVC  274 (307)
T ss_dssp             TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHH
T ss_pred             cCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHH
Confidence            99999999999999998777777788899999999999999998999999999999999999999988665567899999


Q ss_pred             HHHHHHhhcCCCCCCCCCCeeEEEEEcCCC
Q 026983          172 EKVFDRCLAPSAGGEGCDNMTMILVQFKNA  201 (230)
Q Consensus       172 ~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~  201 (230)
                      +.|++.|+.    +++.||+||||+++...
T Consensus       275 ~~Lv~~A~~----~g~~DNiTvivv~~~~~  300 (307)
T 2p8e_A          275 NWVVDTCLH----KGSRDNMSIVLVCFSNE  300 (307)
T ss_dssp             HHHHHHHHH----TTCCSCEEEEEEEC---
T ss_pred             HHHHHHHHH----cCCCCCeEEEEEECCCC
Confidence            999999999    88999999999999764


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=2.8e-38  Score=271.99  Aligned_cols=174  Identities=59%  Similarity=1.006  Sum_probs=152.7

Q ss_pred             CCCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEE-ecccCCccceeeccCCc
Q 026983           26 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ-VGRVNGSLNLARAIGDV  104 (230)
Q Consensus        26 ~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~-~~~~~g~~~~tr~lG~~  104 (230)
                      ...+|||++++++.++++|+||+||||+|++++|++++||+||++.++.|+.|+...++.+. ..|++|.+.+||+||+.
T Consensus       127 ~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~  206 (304)
T 2i0o_A          127 GKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDH  206 (304)
T ss_dssp             TTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECG
T ss_pred             CCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCH
Confidence            45799999999999999999999999999999999999999999999999999999998887 66778899999999999


Q ss_pred             cccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhhcCCC
Q 026983          105 EFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN-ETKLSVICEKVFDRCLAPSA  183 (230)
Q Consensus       105 ~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~-~~~~~~~a~~l~~~a~~~~~  183 (230)
                      .+|.+..+++..+.|.++|++..+++.++|.|||||||||||+++++++.+++...... ..+++++|+.|++.|+.+|.
T Consensus       207 ~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~  286 (304)
T 2i0o_A          207 GYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHT  286 (304)
T ss_dssp             GGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC----
T ss_pred             HHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhh
Confidence            99988888888888999999999999999999899999999999999999999886654 57899999999999998664


Q ss_pred             -C-CCCCCCeeEEEEEcC
Q 026983          184 -G-GEGCDNMTMILVQFK  199 (230)
Q Consensus       184 -~-~~~~DN~Tvivi~~~  199 (230)
                       + +++.||+||||++|+
T Consensus       287 ~g~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          287 RGDGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             --------CEEEEEEEEC
T ss_pred             ccCCCCCCCeEEEEEEeC
Confidence             2 467899999999874


No 3  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=1.2e-37  Score=276.00  Aligned_cols=172  Identities=41%  Similarity=0.734  Sum_probs=160.2

Q ss_pred             CCCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEecccCCccceeeccCCcc
Q 026983           26 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVE  105 (230)
Q Consensus        26 ~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~~~~g~~~~tr~lG~~~  105 (230)
                      ...+|||++++++.++++|+||+||||+|++++|++++||+||++.++.|+.|+...|+.+...|++|.+.+||+||+..
T Consensus       122 ~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~gg~v~~~Rv~g~l~ltRalGd~~  201 (382)
T 1a6q_A          122 ADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFD  201 (382)
T ss_dssp             CCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGG
T ss_pred             CCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhcCcEEecccccCceeeeeecCcHh
Confidence            34699999999999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             ccccCCCCCCCCceeeeceEEEEEec-CCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCC
Q 026983          106 FKLNKSLPAEKQIVTANPDISTIELC-DDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG  184 (230)
Q Consensus       106 ~k~~~~~~~~~~~v~~~p~i~~~~l~-~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~  184 (230)
                      +|.....++..|.|.++|++..+++. ++|.||||||||||++++++++.+++...+....+++.+|+.|++.|+.    
T Consensus       202 ~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~----  277 (382)
T 1a6q_A          202 YKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY----  277 (382)
T ss_dssp             GSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH----
T ss_pred             hcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh----
Confidence            99887777788889999999999999 8777999999999999999999999988665567899999999999998    


Q ss_pred             CCCCCCeeEEEEEcCCC
Q 026983          185 GEGCDNMTMILVQFKNA  201 (230)
Q Consensus       185 ~~~~DN~Tvivi~~~~~  201 (230)
                      +++.||+||||++|...
T Consensus       278 ~g~~DNiTvivv~~~~~  294 (382)
T 1a6q_A          278 KGSRDNMSVILICFPNA  294 (382)
T ss_dssp             TTCCSCEEEEEEECTTS
T ss_pred             cCCcCCEEEEEEEecCC
Confidence            88999999999999753


No 4  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=1.6e-35  Score=258.40  Aligned_cols=165  Identities=36%  Similarity=0.563  Sum_probs=147.1

Q ss_pred             CCCCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEe---cccCCccceeecc
Q 026983           25 HGPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAI  101 (230)
Q Consensus        25 ~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~---~~~~g~~~~tr~l  101 (230)
                      ....+|||++++++.++++|+||+||||+|++++|++++||+||++.++.|+.|+...++.+..   .+++|.+.+||+|
T Consensus       147 ~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRal  226 (337)
T 3qn1_B          147 ASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI  226 (337)
T ss_dssp             SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCE
T ss_pred             ccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCcccccccc
Confidence            3457999999999999999999999999999999999999999999999999999999998864   6788999999999


Q ss_pred             CCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhc-----------------CC
Q 026983          102 GDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT-----------------NE  164 (230)
Q Consensus       102 G~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~-----------------~~  164 (230)
                      |+..+|         |.+.++|++..+.+.+.+.|||||||||||++++++|.+++...+.                 ..
T Consensus       227 Gd~~~~---------~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (337)
T 3qn1_B          227 GDRYLK---------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGID  297 (337)
T ss_dssp             ECGGGT---------TTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCC
T ss_pred             cccccc---------CCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccC
Confidence            999876         5678999999999866555999999999999999999999976321                 03


Q ss_pred             CCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcCCCC
Q 026983          165 TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNAS  202 (230)
Q Consensus       165 ~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~~  202 (230)
                      .+++.+|+.|++.|+.    +|+.||+||||+++....
T Consensus       298 ~~~~~~a~~Lv~~A~~----~g~~DNiTvivv~l~~~~  331 (337)
T 3qn1_B          298 PACQAAADYLSMLALQ----KGSKDNISIIVIDLKAQR  331 (337)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCSCEEEEEEECCSCC
T ss_pred             hhHHHHHHHHHHHHHH----cCCCCCEEEEEEEecCCc
Confidence            4578999999999999    899999999999998653


No 5  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.3e-35  Score=251.76  Aligned_cols=163  Identities=40%  Similarity=0.605  Sum_probs=144.2

Q ss_pred             CCCCcceeEEEEEEC-CeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEec-----ccCCccceee
Q 026983           26 GPTSGSTACVAIIRD-KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVG-----RVNGSLNLAR   99 (230)
Q Consensus        26 ~~~~GtT~~~~~i~~-~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~-----~~~g~~~~tr   99 (230)
                      ...+|||++++++.+ +++|++|+||||+|++++|++.+||.||++..+.|+.|+...+|.+...     +.++.+.+||
T Consensus        98 ~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltr  177 (274)
T 2iq1_A           98 LLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTR  177 (274)
T ss_dssp             GGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEECTTSCEEETTTBSCSB
T ss_pred             CCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEcCCCCceeECCeEeecc
Confidence            446999999999985 6899999999999999999999999999999999999999998888753     4578899999


Q ss_pred             ccCCccccccCCCCCCCCceeeeceEEEEEecCC-CeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Q 026983          100 AIGDVEFKLNKSLPAEKQIVTANPDISTIELCDD-DEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRC  178 (230)
Q Consensus       100 ~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~g-d~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a  178 (230)
                      +||+..+|.        +.+..+|++..+++.++ |.||||||||||++++++++.+++..    ..+++++|+.|++.|
T Consensus       178 alGd~~~k~--------~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~----~~~~~~~a~~L~~~A  245 (274)
T 2iq1_A          178 SIGDLDLKT--------SGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ----CHDPNEAAHAVTEQA  245 (274)
T ss_dssp             CEECGGGTT--------TTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHT----SSSHHHHHHHHHHHH
T ss_pred             ccCChhhcc--------CCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHH----cCCHHHHHHHHHHHH
Confidence            999998763        34678999999999986 56999999999999999999999976    568999999999999


Q ss_pred             hcCCCCCCCCCCeeEEEEEcCCCCCC
Q 026983          179 LAPSAGGEGCDNMTMILVQFKNASNN  204 (230)
Q Consensus       179 ~~~~~~~~~~DN~Tvivi~~~~~~~~  204 (230)
                      +.    +++.||+||||+++..+...
T Consensus       246 ~~----~g~~DNiTvivv~~~~~~~~  267 (274)
T 2iq1_A          246 IQ----YGTEDNSTAVVVPFGAWGKE  267 (274)
T ss_dssp             HH----TTCCSCEEEEEEECTTC---
T ss_pred             HH----cCCCCCeEEEEEEccCCCCC
Confidence            99    88999999999999876443


No 6  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=3.9e-36  Score=264.22  Aligned_cols=174  Identities=25%  Similarity=0.349  Sum_probs=151.9

Q ss_pred             CCCcceeEEEEEECCeEEEEEeccccEEEEeC---C--eeeecCCCCCCCcHHHHHHHHHcCCEEEecccCCccceeecc
Q 026983           27 PTSGSTACVAIIRDKQLVVANAGDSRCVLSRK---G--QALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAI  101 (230)
Q Consensus        27 ~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~---~--~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~~~~g~~~~tr~l  101 (230)
                      ..+|||++++++.++++|+||+||||+|++++   |  ++++||+||++.++.|++|+...|+.+...+..|.+ +||+|
T Consensus       151 ~~~GtTav~~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~r~~g~l-lTRal  229 (358)
T 2irm_A          151 LSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLY-STRCI  229 (358)
T ss_dssp             TTCEEEEEEEEEESSEEEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTTC-BSBCE
T ss_pred             CCCCCcEEEEEEECCEEEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEeccCcCCEE-cccCC
Confidence            36999999999999999999999999999998   8  999999999999999999999999988888887766 99999


Q ss_pred             CCcccccc-----CCCCCCCCceeeeceEEE-EEecCCCeEEEEEcCCCcCcCC----------HHHHHHHHHHHhcCCC
Q 026983          102 GDVEFKLN-----KSLPAEKQIVTANPDIST-IELCDDDEFLVIACDGIWDCLS----------SQELVDFVRDQLTNET  165 (230)
Q Consensus       102 G~~~~k~~-----~~~~~~~~~v~~~p~i~~-~~l~~gd~~lIl~SDGv~d~l~----------~~~i~~~~~~~~~~~~  165 (230)
                      |+..+|..     ...+++.+.+.++|++.. +++.++|.||||||||||++++          ++++.+++...+....
T Consensus       230 Gd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~  309 (358)
T 2irm_A          230 GNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQS  309 (358)
T ss_dssp             ECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHhccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCC
Confidence            99987741     122345668899999995 9999999999999999999999          8999999998766667


Q ss_pred             CHHHHHHHHHHHhhcCC-----------CCCC--CCCCeeEEEEEcCCC
Q 026983          166 KLSVICEKVFDRCLAPS-----------AGGE--GCDNMTMILVQFKNA  201 (230)
Q Consensus       166 ~~~~~a~~l~~~a~~~~-----------~~~~--~~DN~Tvivi~~~~~  201 (230)
                      +++.+|+.|++.|+..+           ..+|  +.||+||||++|..|
T Consensus       310 ~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~p  358 (358)
T 2irm_A          310 TLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNYA  358 (358)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC-
T ss_pred             CHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCCC
Confidence            99999999999997631           1145  899999999999753


No 7  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=1.9e-35  Score=255.68  Aligned_cols=164  Identities=35%  Similarity=0.573  Sum_probs=144.1

Q ss_pred             CCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEe---cccCCccceeeccCC
Q 026983           27 PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGD  103 (230)
Q Consensus        27 ~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~---~~~~g~~~~tr~lG~  103 (230)
                      ..+|||++++++.++++|+||+||||+|++|+|++++||+||++.++.|+.|+...++.+..   .+++|.+.+||+||+
T Consensus       120 ~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd  199 (316)
T 3kdj_B          120 ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGD  199 (316)
T ss_dssp             TTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEEC
T ss_pred             CCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCc
Confidence            47999999999999999999999999999999999999999999999999999999998863   678899999999999


Q ss_pred             ccccccCCCCCCCCceeeeceEEEEE-ecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhc--------------------
Q 026983          104 VEFKLNKSLPAEKQIVTANPDISTIE-LCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT--------------------  162 (230)
Q Consensus       104 ~~~k~~~~~~~~~~~v~~~p~i~~~~-l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~--------------------  162 (230)
                      ..+|         +.+.++|++..+. +.++| |||||||||||+++++++.+++...+.                    
T Consensus       200 ~~~~---------~~~~~~pdv~~~~~~~~~d-~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (316)
T 3kdj_B          200 RYLK---------PSIIPDPEVTAVKRVKEDD-CLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR  269 (316)
T ss_dssp             GGGT---------TTSBCCCEEEEEECCTTEE-EEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC---------------
T ss_pred             cccC---------CCcCCCCceEEEEecCCCC-EEEEEccCcccCCCHHHHHHHHHHHhhhhcccccccccccccccccc
Confidence            9877         5678999999998 45555 899999999999999999999976220                    


Q ss_pred             ---CCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcCCCCCC
Q 026983          163 ---NETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNN  204 (230)
Q Consensus       163 ---~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~~~~  204 (230)
                         ...+++.+|+.|++.|+.    +|+.||+||||+++......
T Consensus       270 ~~~~~~~~~~aa~~Lv~~A~~----~g~~DNiTvivv~l~~~~~~  310 (316)
T 3kdj_B          270 KEGKDPAAMSAAEYLSKLAIQ----RGSKDNISVVVVDLKPRRKL  310 (316)
T ss_dssp             --CCCHHHHHHHHHHHHHHHH----TTCCSCEEEEEEECSCC---
T ss_pred             ccccCchHHHHHHHHHHHHHH----cCCCCCeEEEEEEccCCCcc
Confidence               123578999999999999    89999999999999876554


No 8  
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=7e-35  Score=257.67  Aligned_cols=157  Identities=22%  Similarity=0.343  Sum_probs=137.8

Q ss_pred             CeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEe--c--ccCCccceeeccCCccccccCCCCCCC
Q 026983           41 KQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQV--G--RVNGSLNLARAIGDVEFKLNKSLPAEK  116 (230)
Q Consensus        41 ~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~--~--~~~g~~~~tr~lG~~~~k~~~~~~~~~  116 (230)
                      +++|+||+||||+|++++|++++||+||++.++.|+.||..+|+.+..  .  |++|.+++||+||+..+|.....++..
T Consensus       166 ~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~  245 (377)
T 3d8k_A          166 YTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQ  245 (377)
T ss_dssp             EEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSS
T ss_pred             CeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhhccccccccc
Confidence            489999999999999999999999999999999999999999988762  2  667888999999999999888888888


Q ss_pred             CceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEE
Q 026983          117 QIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT-NETKLSVICEKVFDRCLAPSAGGEGCDNMTMIL  195 (230)
Q Consensus       117 ~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~-~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tviv  195 (230)
                      |.++++|++..+++.++| +|||||||||++++++++++.+...+. ...+++.+|+.|++.|+.    +++.||+||||
T Consensus       246 ~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~----~g~~DNiTviv  320 (377)
T 3d8k_A          246 DLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKR----RKVTKNISTFV  320 (377)
T ss_dssp             CSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTT----SSCCSCCCEEE
T ss_pred             CccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHh----cCCCCCEEEEE
Confidence            999999999999999999 788999999999999998876654221 245799999999999998    89999999999


Q ss_pred             EEcCCCC
Q 026983          196 VQFKNAS  202 (230)
Q Consensus       196 i~~~~~~  202 (230)
                      +++....
T Consensus       321 v~~~~~~  327 (377)
T 3d8k_A          321 RHLPESR  327 (377)
T ss_dssp             EECCSSC
T ss_pred             EEecCCc
Confidence            9997653


No 9  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=9.1e-36  Score=265.45  Aligned_cols=177  Identities=25%  Similarity=0.381  Sum_probs=151.7

Q ss_pred             CCcceeEEEEEECCeEEEEEeccccEEEEeCC----eeeecCCCCCCCcHHHHHHHHHcCCEEE---ecccCCccceeec
Q 026983           28 TSGSTACVAIIRDKQLVVANAGDSRCVLSRKG----QALNLSKDHKPDLEVEKDRILKAGGFIQ---VGRVNGSLNLARA  100 (230)
Q Consensus        28 ~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~----~~~~lT~dh~~~~~~~~~r~~~~~~~~~---~~~~~g~~~~tr~  100 (230)
                      .+|||++++++.++++|+||+||||+|+++++    ++++||.||++.++.|++|+...|+.+.   ..+++|.+.+||+
T Consensus       163 ~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRa  242 (401)
T 2j4o_A          163 SGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRR  242 (401)
T ss_dssp             CCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBC
T ss_pred             CCccCEEEEEEECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccc
Confidence            69999999999999999999999999999988    9999999999999999999999998753   4577888899999


Q ss_pred             cCCccccccCC-----CCCCCCceeeeceEEE-EEecCCCeEEEEEcCCCcCcC--------CHHHHHHHHHHHhcCCCC
Q 026983          101 IGDVEFKLNKS-----LPAEKQIVTANPDIST-IELCDDDEFLVIACDGIWDCL--------SSQELVDFVRDQLTNETK  166 (230)
Q Consensus       101 lG~~~~k~~~~-----~~~~~~~v~~~p~i~~-~~l~~gd~~lIl~SDGv~d~l--------~~~~i~~~~~~~~~~~~~  166 (230)
                      ||+..+|.+..     ..++.+.++++|++.. +++.++|.|||||||||||++        +++++.+++...+....+
T Consensus       243 lGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~  322 (401)
T 2j4o_A          243 IGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTS  322 (401)
T ss_dssp             EECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSS
T ss_pred             cCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCC
Confidence            99998885421     1345577899999996 999999999999999999999        899999999886555678


Q ss_pred             HHHHHHHHHHHhhcCCC---CCC--------CCCCeeEEEEEcCCCCCC
Q 026983          167 LSVICEKVFDRCLAPSA---GGE--------GCDNMTMILVQFKNASNN  204 (230)
Q Consensus       167 ~~~~a~~l~~~a~~~~~---~~~--------~~DN~Tvivi~~~~~~~~  204 (230)
                      ++.+|+.|++.|+..|.   .+|        ..||+||||++|..+...
T Consensus       323 ~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~~~~  371 (401)
T 2j4o_A          323 LDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLGE  371 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCCCC-
T ss_pred             HHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCCCcc
Confidence            99999999999985331   123        379999999999876444


No 10 
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=5.4e-35  Score=253.36  Aligned_cols=167  Identities=22%  Similarity=0.405  Sum_probs=141.7

Q ss_pred             CCcceeEEEEEECCeEEEEEeccccEEEEeC---C-eeeecCCCCCCCcHHHHHHHHHcCCEEEe--------cccCCcc
Q 026983           28 TSGSTACVAIIRDKQLVVANAGDSRCVLSRK---G-QALNLSKDHKPDLEVEKDRILKAGGFIQV--------GRVNGSL   95 (230)
Q Consensus        28 ~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~---~-~~~~lT~dh~~~~~~~~~r~~~~~~~~~~--------~~~~g~~   95 (230)
                      .+|||++  ++.++++|+||+||||+|++++   | ++++||+||++.++.|++|+...|+.+..        .+..|.+
T Consensus       137 g~gtt~~--~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l  214 (324)
T 2i44_A          137 SSTSVTA--VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDF  214 (324)
T ss_dssp             EECEEEE--EEETTEEEEEEESSCEEEEEEEETTEEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTH
T ss_pred             CCCeEEE--EEECCeEEEEEccCceEEEEeccCCCceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcc
Confidence            3555544  4889999999999999999996   7 89999999999999999999999998842        1346788


Q ss_pred             ceeeccCC----ccccccCCCC-CCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHH-
Q 026983           96 NLARAIGD----VEFKLNKSLP-AEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSV-  169 (230)
Q Consensus        96 ~~tr~lG~----~~~k~~~~~~-~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~-  169 (230)
                      .++|++|+    ..+|...+.. ...++|.++|++..+++.++|.||||||||||++++++++.+++........++++ 
T Consensus       215 ~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~  294 (324)
T 2i44_A          215 SFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQA  294 (324)
T ss_dssp             HHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             cchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHH
Confidence            99999999    4444322222 24577899999999999999988999999999999999999999886655578999 


Q ss_pred             -HHHHHHHHhhcCCCCCCCCCCeeEEEEEcCC
Q 026983          170 -ICEKVFDRCLAPSAGGEGCDNMTMILVQFKN  200 (230)
Q Consensus       170 -~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~  200 (230)
                       +|+.|++.|+.    +++.||+||||+++..
T Consensus       295 ~~a~~L~~~A~~----~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          295 LVEMTLAEQQSR----NQSADNITAMTVFFKK  322 (324)
T ss_dssp             HHHHHHHHHHHT----TCCCCCEEEEEEEEC-
T ss_pred             HHHHHHHHHHHh----cCCCCCCEEEEEEeeC
Confidence             99999999998    8999999999999965


No 11 
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=2.1e-34  Score=253.63  Aligned_cols=157  Identities=36%  Similarity=0.575  Sum_probs=138.2

Q ss_pred             CeEEEEEeccccEEEE-eCCeeeecCCCCCCCcHHHHHHHHHcCCEEEe---cccCCccceeeccCCccccccCCCCCCC
Q 026983           41 KQLVVANAGDSRCVLS-RKGQALNLSKDHKPDLEVEKDRILKAGGFIQV---GRVNGSLNLARAIGDVEFKLNKSLPAEK  116 (230)
Q Consensus        41 ~~l~ianvGDSr~~l~-~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~---~~~~g~~~~tr~lG~~~~k~~~~~~~~~  116 (230)
                      +++|+||+||||+|++ ++|++.+||+||++.++.|+.|+..+|+.+..   +|+++.+.+||+||+..+|.....++..
T Consensus       173 ~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~  252 (364)
T 2isn_A          173 FLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAFGDSDFKMNPNLPPEE  252 (364)
T ss_dssp             EEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGSCCCSSCGGG
T ss_pred             cEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccCCceeeEEEecchhhccccccCccc
Confidence            3899999999999999 68999999999999999999999999988764   4667778999999999999777777777


Q ss_pred             CceeeeceEEEEEecCCCeEEEEEcCCCcCcCC--HHHHHHHHHHH-hcCCCCHHHHHHHHHHHhhcCCCCCCCCCCeeE
Q 026983          117 QIVTANPDISTIELCDDDEFLVIACDGIWDCLS--SQELVDFVRDQ-LTNETKLSVICEKVFDRCLAPSAGGEGCDNMTM  193 (230)
Q Consensus       117 ~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~--~~~i~~~~~~~-~~~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tv  193 (230)
                      +.|+++|++..+++.++| ||||||||||++++  ++++.+++... .....+++++|+.|++.|+.    +++.||+||
T Consensus       253 ~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~----~g~~DNiTv  327 (364)
T 2isn_A          253 QKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYD----MNSQDNISV  327 (364)
T ss_dssp             SSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH----TTCCSCEEE
T ss_pred             CceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh----cCCCCCEEE
Confidence            889999999999999999 89999999999986  78888776443 23456899999999999999    889999999


Q ss_pred             EEEEcCCCC
Q 026983          194 ILVQFKNAS  202 (230)
Q Consensus       194 ivi~~~~~~  202 (230)
                      ||++|....
T Consensus       328 ivv~~~~~~  336 (364)
T 2isn_A          328 MLVAFHNQE  336 (364)
T ss_dssp             EEEEECSSC
T ss_pred             EEEEcCCCC
Confidence            999997654


No 12 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=2.6e-34  Score=255.23  Aligned_cols=163  Identities=40%  Similarity=0.600  Sum_probs=145.3

Q ss_pred             CCCCcceeEEEEEECC-eEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEE-----ecccCCccceee
Q 026983           26 GPTSGSTACVAIIRDK-QLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ-----VGRVNGSLNLAR   99 (230)
Q Consensus        26 ~~~~GtT~~~~~i~~~-~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~-----~~~~~g~~~~tr   99 (230)
                      ...+|||++++++.++ ++|+||+||||+|++|+|++++||+||++.++.|++|+...|+.+.     ..++++.+.+||
T Consensus       212 ~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltR  291 (389)
T 4da1_A          212 LLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTR  291 (389)
T ss_dssp             GGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSB
T ss_pred             cCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEe
Confidence            3469999999999865 8999999999999999999999999999999999999999998876     346788999999


Q ss_pred             ccCCccccccCCCCCCCCceeeeceEEEEEecCC-CeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Q 026983          100 AIGDVEFKLNKSLPAEKQIVTANPDISTIELCDD-DEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRC  178 (230)
Q Consensus       100 ~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~g-d~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a  178 (230)
                      +||+..+|.        +.+.++|++..+.+..+ |.||||||||||++++++++.+++..    ..+++++|+.|++.|
T Consensus       292 alGd~~~k~--------~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~----~~~~~~~a~~Lv~~A  359 (389)
T 4da1_A          292 SIGDLDLKT--------SGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ----CHDPNEAAHAVTEQA  359 (389)
T ss_dssp             CEECGGGGG--------GTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHH----SSSHHHHHHHHHHHH
T ss_pred             eeCChhhcc--------CCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHh----cCCHHHHHHHHHHHH
Confidence            999998774        34689999999999876 67999999999999999999999976    568999999999999


Q ss_pred             hcCCCCCCCCCCeeEEEEEcCCCCCC
Q 026983          179 LAPSAGGEGCDNMTMILVQFKNASNN  204 (230)
Q Consensus       179 ~~~~~~~~~~DN~Tvivi~~~~~~~~  204 (230)
                      +.    +++.||+||||++|......
T Consensus       360 ~~----~g~~DNiTvivv~~~~~~~~  381 (389)
T 4da1_A          360 IQ----YGTEDNSTAVVVPFGAWGKY  381 (389)
T ss_dssp             HH----HTCCSCEEEEEEEECCC---
T ss_pred             HH----cCCCCCeEEEEEEecCCCCC
Confidence            99    88999999999999876443


No 13 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=6.6e-34  Score=257.55  Aligned_cols=174  Identities=33%  Similarity=0.496  Sum_probs=144.2

Q ss_pred             CCCcceeEEEEEECCeEEEEEeccccEEEEe---CC--eeeecCCCCCCCcHHHHHHHHHcCC------EEEecccCCcc
Q 026983           27 PTSGSTACVAIIRDKQLVVANAGDSRCVLSR---KG--QALNLSKDHKPDLEVEKDRILKAGG------FIQVGRVNGSL   95 (230)
Q Consensus        27 ~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~---~~--~~~~lT~dh~~~~~~~~~r~~~~~~------~~~~~~~~g~~   95 (230)
                      ..+|||++++++.++++||||+||||+|+++   +|  .+++||.||++.++.|++|+..+|+      .+...|++|.+
T Consensus       197 ~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l  276 (467)
T 2pnq_A          197 AFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLL  276 (467)
T ss_dssp             HHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTB
T ss_pred             CCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCcccccc
Confidence            4699999999999999999999999999998   47  7999999999999999999999974      33466888899


Q ss_pred             ceeeccCCccccccC------------------------CCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHH
Q 026983           96 NLARAIGDVEFKLNK------------------------SLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQ  151 (230)
Q Consensus        96 ~~tr~lG~~~~k~~~------------------------~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~  151 (230)
                      .+||+|||..+|.+.                        ....+.|+++++|++..+++.++|.||||||||||++++++
T Consensus       277 ~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~  356 (467)
T 2pnq_A          277 MPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQ  356 (467)
T ss_dssp             SSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHH
T ss_pred             ccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChH
Confidence            999999999988531                        11235688999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCC--CCH------------------------------HHHHHHHHHHhhcCCC----------------
Q 026983          152 ELVDFVRDQLTNE--TKL------------------------------SVICEKVFDRCLAPSA----------------  183 (230)
Q Consensus       152 ~i~~~~~~~~~~~--~~~------------------------------~~~a~~l~~~a~~~~~----------------  183 (230)
                      ++++++.......  ..|                              +++|..|++.|+..+.                
T Consensus       357 eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~  436 (467)
T 2pnq_A          357 DVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLP  436 (467)
T ss_dssp             HHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-------------------
T ss_pred             HHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCC
Confidence            9999998875321  012                              5678999999998430                


Q ss_pred             ---CCCCCCCeeEEEEEcCC
Q 026983          184 ---GGEGCDNMTMILVQFKN  200 (230)
Q Consensus       184 ---~~~~~DN~Tvivi~~~~  200 (230)
                         .+.++||||||||+|..
T Consensus       437 ~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          437 EELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             ------CCSCEEEEEEEECH
T ss_pred             ccccccCCCCcEEEEEEeCc
Confidence               12258999999999964


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.97  E-value=6.3e-32  Score=225.53  Aligned_cols=147  Identities=24%  Similarity=0.357  Sum_probs=126.7

Q ss_pred             CCCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEE--ecccCCccceeeccCC
Q 026983           26 GPTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ--VGRVNGSLNLARAIGD  103 (230)
Q Consensus        26 ~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~--~~~~~g~~~~tr~lG~  103 (230)
                      ...+|||++++++.+++++++|+||||+|++++|++++||.||++.++.++.     |....  ...+++.+.+||+||+
T Consensus        99 ~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~-----g~i~~~~~~~~~~~~~ltralG~  173 (250)
T 2pk0_A           99 YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKA-----GQLTEEEAASHPQKNIITQSIGQ  173 (250)
T ss_dssp             CTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHT-----TSSCHHHHHTCCSCCCBSCCBSC
T ss_pred             CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHHHHHc-----CCCCHHHHHhCCCcceEEeecCC
Confidence            3469999999999999999999999999999999999999999986654332     22111  1234677899999999


Q ss_pred             ccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCC
Q 026983          104 VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA  183 (230)
Q Consensus       104 ~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a~~~~~  183 (230)
                      ..              ..+|++..+++.++| +|||||||||+.++++++.+++..    ..+++++|+.|++.|+.   
T Consensus       174 ~~--------------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~----~~~~~~~a~~L~~~a~~---  231 (250)
T 2pk0_A          174 AN--------------PVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQ----EKTLDDKNQDLITLANH---  231 (250)
T ss_dssp             SS--------------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS----SSCHHHHHHHHHHHHHH---
T ss_pred             CC--------------CccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhc----CCCHHHHHHHHHHHHHH---
Confidence            87              679999999999999 688999999999999999999876    56899999999999998   


Q ss_pred             CCCCCCCeeEEEEEcCC
Q 026983          184 GGEGCDNMTMILVQFKN  200 (230)
Q Consensus       184 ~~~~~DN~Tvivi~~~~  200 (230)
                       +++.||+||||+++..
T Consensus       232 -~g~~DniTvivv~~~~  247 (250)
T 2pk0_A          232 -RGGLDNITVALVYVES  247 (250)
T ss_dssp             -TTCCSCEEEEEEEECC
T ss_pred             -cCCCCCeEEEEEEeeC
Confidence             7889999999999974


No 15 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.97  E-value=1.1e-30  Score=216.49  Aligned_cols=160  Identities=20%  Similarity=0.258  Sum_probs=124.0

Q ss_pred             HHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEec
Q 026983           12 LINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVG   89 (230)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~   89 (230)
                      ++..+.+..........+|||++++++.  +++++++|+||||+|+++++++.+||.||++.++.++.+.+...+   ..
T Consensus        79 ~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~~~g~i~~~~---~~  155 (240)
T 2j82_A           79 ANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQLGSLTIEQ---AR  155 (240)
T ss_dssp             HHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHHC---------------
T ss_pred             HHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHHHHHcCCCCHHH---Hh
Confidence            3444444333333344689999999999  999999999999999999999999999999876554444333322   12


Q ss_pred             ccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHH
Q 026983           90 RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSV  169 (230)
Q Consensus        90 ~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~  169 (230)
                      .+++.+.+||+||+..              ..+|++..+++.++| +|||||||||+.++++++.+++.     ..++++
T Consensus       156 ~~~~~~~ltralG~~~--------------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~-----~~~~~~  215 (240)
T 2j82_A          156 QHPWRHVLSQCLGRED--------------LSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLS-----EPNVQK  215 (240)
T ss_dssp             ----CCCBSCCBSCTT--------------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT-----CSSHHH
T ss_pred             cCCCcCeEeecCCCCC--------------ceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHc-----cCCHHH
Confidence            3456679999999976              679999999999999 57799999999999999999886     368999


Q ss_pred             HHHHHHHHhhcCCCCCCCCCCeeEEEEEc
Q 026983          170 ICEKVFDRCLAPSAGGEGCDNMTMILVQF  198 (230)
Q Consensus       170 ~a~~l~~~a~~~~~~~~~~DN~Tvivi~~  198 (230)
                      +|+.|++.|+.    +++.||+||||+++
T Consensus       216 ~a~~l~~~a~~----~g~~DniTvivv~~  240 (240)
T 2j82_A          216 AAAALVDAAKT----HGGRDNVTVVVISV  240 (240)
T ss_dssp             HHHHHHHHHHH----TTCCSCEEEEEEEC
T ss_pred             HHHHHHHHHHH----cCCCCCeEEEEEeC
Confidence            99999999998    77889999999975


No 16 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.97  E-value=8.2e-31  Score=217.12  Aligned_cols=145  Identities=19%  Similarity=0.317  Sum_probs=120.0

Q ss_pred             CCCcceeEEEEEECCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEEecccCCccceeeccCCccc
Q 026983           27 PTSGSTACVAIIRDKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEF  106 (230)
Q Consensus        27 ~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~~~~~~g~~~~tr~lG~~~~  106 (230)
                      ..+|||++++++.+++++++|+||||+|++++|++.+||.||++.++....+.+....   ...++.++.+||++|+.. 
T Consensus        92 ~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~~~~G~i~~~~---~~~~~~~~~~tr~lg~~~-  167 (237)
T 1txo_A           92 EGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEE---AHSHPQRSLIMRALTGHE-  167 (237)
T ss_dssp             TTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTSSCTTG---GGGCTTTTCBCCCBSSSC-
T ss_pred             CCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHHHHHcCCCCHHH---HhhCccccceeeccCCCC-
Confidence            4689999999999999999999999999999999999999999765433222111110   122345568999999643 


Q ss_pred             cccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCCC
Q 026983          107 KLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE  186 (230)
Q Consensus       107 k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~~~  186 (230)
                                    .+|++..+++.++|. |||||||||++++++++.+++..     .+++++|+.|++.|+.    ++
T Consensus       168 --------------~~p~~~~~~l~~~d~-lvl~SDGl~d~l~~~~i~~~~~~-----~~~~~~a~~L~~~a~~----~g  223 (237)
T 1txo_A          168 --------------VEPTLTMREARAGDR-YLLCSDGLSDPVSDETILEALQI-----PEVAESAHRLIELALR----GG  223 (237)
T ss_dssp             --------------CCCEEEEEECCTTCE-EEEECHHHHTTSCHHHHHHHHTS-----SSHHHHHHHHHHHHHH----TT
T ss_pred             --------------ccceEEEEecCCCCE-EEEECCCCCCCCCHHHHHHHHhc-----CCHHHHHHHHHHHHHH----cC
Confidence                          689999999999995 57999999999999999999853     4899999999999998    78


Q ss_pred             CCCCeeEEEEEcC
Q 026983          187 GCDNMTMILVQFK  199 (230)
Q Consensus       187 ~~DN~Tvivi~~~  199 (230)
                      +.||+||||+++.
T Consensus       224 ~~DniTvivv~~~  236 (237)
T 1txo_A          224 GPDNVTVVVADLE  236 (237)
T ss_dssp             CCSCEEEEEEEEE
T ss_pred             CCCCeEEEEEEee
Confidence            8999999999985


No 17 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.97  E-value=1.4e-31  Score=218.85  Aligned_cols=158  Identities=18%  Similarity=0.140  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCC
Q 026983            7 GFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGG   84 (230)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~   84 (230)
                      +.++.++..+.+..........||||++++++.  +++++++|+||||+|++++|++.+||.||++.+++.+.+.     
T Consensus        48 ~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~-----  122 (211)
T 3rnr_A           48 DAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGR-----  122 (211)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTS-----
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCC-----
Confidence            456666666666544445556799999999999  9999999999999999999999999999998766544433     


Q ss_pred             EEEecccCCccceeeccCCccccccCCCCCCCCceeeeceE--EEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhc
Q 026983           85 FIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDI--STIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT  162 (230)
Q Consensus        85 ~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i--~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~  162 (230)
                        ....++..+.+||++|...              ..+|++  ..+++.++| +|||||||||++++++++.+++...  
T Consensus       123 --~~~~~~~~~~ltralG~~~--------------~~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~~--  183 (211)
T 3rnr_A          123 --GPVPGPAGEMITSFIGIEN--------------LTEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSRG--  183 (211)
T ss_dssp             --CCCCSHHHHCBSCCBTCSS--------------CCCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECTT--
T ss_pred             --ChhhCCCccEEecccCCCC--------------CcceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhcC--
Confidence              2244556678999999876              568888  789999999 5569999999999999998887552  


Q ss_pred             CCCCHHHHHHHHHHHhhcCCCCCC--CCCCeeEEEEEc
Q 026983          163 NETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQF  198 (230)
Q Consensus       163 ~~~~~~~~a~~l~~~a~~~~~~~~--~~DN~Tvivi~~  198 (230)
                        .+    |+.|++.|+.    ++  +.||+||||+++
T Consensus       184 --~~----a~~L~~~a~~----~g~~~~DNiTvivv~L  211 (211)
T 3rnr_A          184 --SD----ARGILQEVEA----QGRPYQDNATLALVIL  211 (211)
T ss_dssp             --SC----HHHHHHHHHH----SCTTSCSSCEEEEEEC
T ss_pred             --Ch----HHHHHHHHHH----cCCCCCCceEEEEEeC
Confidence              22    8899999988    66  889999999985


No 18 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.97  E-value=1.8e-30  Score=214.69  Aligned_cols=141  Identities=24%  Similarity=0.336  Sum_probs=121.5

Q ss_pred             CcceeEEEEEECCe---EEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHcCCEEE--ecccCCccceeeccCC
Q 026983           29 SGSTACVAIIRDKQ---LVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKAGGFIQ--VGRVNGSLNLARAIGD  103 (230)
Q Consensus        29 ~GtT~~~~~i~~~~---l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~~~~~~--~~~~~g~~~~tr~lG~  103 (230)
                      +|||++++++.+++   ++++|+||||+|+++++++.+||.||++.++.++     .|....  ...+++.+.+||+||+
T Consensus        88 ~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~-----~g~i~~~~~~~~~~~~~~tralG~  162 (234)
T 2jfr_A           88 SGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVR-----MGEITRHEARWHPQRHLLTRALGI  162 (234)
T ss_dssp             CEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHHHHH-----TTSSCHHHHTTCTTTTCBSCCBSS
T ss_pred             CCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHHHHH-----cCCCCHHHHhcCcccceeeecCcC
Confidence            99999999999888   9999999999999999999999999998654332     232111  1234567799999998


Q ss_pred             ccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhcCCC
Q 026983          104 VEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSA  183 (230)
Q Consensus       104 ~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~~~~~~~a~~l~~~a~~~~~  183 (230)
                      ..              ..+|++..+++.++| +|||||||||+.++++++.+++ .    ..+++++|+.|++.|+.   
T Consensus       163 ~~--------------~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~----~~~~~~~a~~l~~~a~~---  219 (234)
T 2jfr_A          163 GP--------------HIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-T----SPDPQVAVRRLVEVAND---  219 (234)
T ss_dssp             SS--------------CCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-T----CSSHHHHHHHHHHHHHH---
T ss_pred             CC--------------CceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-c----cCCHHHHHHHHHHHHHH---
Confidence            76              679999999999999 5679999999999999999998 5    56899999999999998   


Q ss_pred             CCCCCCCeeEEEEEc
Q 026983          184 GGEGCDNMTMILVQF  198 (230)
Q Consensus       184 ~~~~~DN~Tvivi~~  198 (230)
                       ++..||+||||+++
T Consensus       220 -~g~~DniTvivv~~  233 (234)
T 2jfr_A          220 -AGGSDNTTVVVIDL  233 (234)
T ss_dssp             -TTCCSCEEEEEEEE
T ss_pred             -cCCCCCeEEEEEEe
Confidence             78899999999987


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.77  E-value=1.3e-17  Score=138.10  Aligned_cols=146  Identities=16%  Similarity=0.261  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHc
Q 026983            5 QHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKA   82 (230)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~   82 (230)
                      ..+.++.+++.+.....     ..+++|+++++++  .++++++|+||+|+|+++++++.+++.++.             
T Consensus        72 ~~~~l~~~n~~l~~~~~-----~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~-------------  133 (242)
T 3t91_A           72 EKIAIKTINSILSLRTT-----DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNL-------------  133 (242)
T ss_dssp             HHHHHHHHHHHHTTC---------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC---------------
T ss_pred             HHHHHHHHHHHHHhcCC-----CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCc-------------
Confidence            34566667776655421     2688999999997  788999999999999999999999865443             


Q ss_pred             CCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCC-----HHHHHHHH
Q 026983           83 GGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLS-----SQELVDFV  157 (230)
Q Consensus        83 ~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~-----~~~i~~~~  157 (230)
                                       .+|-..              ...++...+.+.+|| .|+|||||||+.++     ...+.+++
T Consensus       134 -----------------~lG~~~--------------~~~~~~~~~~l~~GD-~lll~SDGl~e~~~~~~~~~~~~~~ll  181 (242)
T 3t91_A          134 -----------------PIGIIN--------------EFDVEVVSEQLKAGD-LLIMMSDGIFEGPKHVENHDLWMKRKM  181 (242)
T ss_dssp             --------------------CCC--------------TTCEEEEEEECCTTC-EEEEECHHHHTCSTTCSCHHHHHHHHH
T ss_pred             -----------------eeEecC--------------CCcceEEEEEeCCCC-EEEEECCCcccCCCcccchHHHHHHHH
Confidence                             233222              245667889999999 45699999999988     55666665


Q ss_pred             HHHhcCCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcCCCCC
Q 026983          158 RDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASN  203 (230)
Q Consensus       158 ~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~~~  203 (230)
                      ...  ...+++++++.|++.+.....+ ...||+||+++++..+..
T Consensus       182 ~~~--~~~~~~~~~~~l~~~~~~~~~~-~~~DDiTvv~i~~~~~~~  224 (242)
T 3t91_A          182 KGL--KTNDPQEIADLLMEEVIRTRSG-QIEDDMTVVVVRIDHNTP  224 (242)
T ss_dssp             HTC--CCCCHHHHHHHHHHHHHHHTTS-CCCSCEEEEEEEEEECCC
T ss_pred             HHh--cCCCHHHHHHHHHHHHHHHcCC-CCCCceEEEEEEEecCCC
Confidence            432  2468999999999998873311 147999999999986544


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.71  E-value=2.1e-16  Score=131.32  Aligned_cols=143  Identities=16%  Similarity=0.223  Sum_probs=108.0

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHc
Q 026983            5 QHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKA   82 (230)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~   82 (230)
                      ..+.++.+++.+.....     ..+.+|+++++++  .++++++|+||+++|++++|++.+++.++.             
T Consensus        75 ~~~~l~~~n~~l~~~~~-----~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~-------------  136 (242)
T 3pu9_A           75 DGAAARAAHDFLYAMRD-----GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGG-------------  136 (242)
T ss_dssp             HHHHHHHHHHHHHHHTT-----TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCC-------------
T ss_pred             HHHHHHHHHHHHHhccC-----CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCc-------------
Confidence            45567777777754431     2478999999997  678999999999999999999999988764             


Q ss_pred             CCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCC-------HHHHHH
Q 026983           83 GGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLS-------SQELVD  155 (230)
Q Consensus        83 ~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~-------~~~i~~  155 (230)
                                       .+|-..              ...++...+++.+|| .|+||||||++..+       .+.+..
T Consensus       137 -----------------~lG~~~--------------~~~~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~~~g~~~l~~  184 (242)
T 3pu9_A          137 -----------------RIGIYR--------------HTRPRVLEFPAEPGL-TVILVSDGIIGAGGRRGQPLEFLATGG  184 (242)
T ss_dssp             -----------------CBSSCT--------------TCCCEEEEEECCTTC-EEEEECHHHHTTTTTTTCCCCHHHHHH
T ss_pred             -----------------cccccC--------------CCCceEEEEEeCCCC-EEEEECcCcccCCCCccccccHHHHHH
Confidence                             244332              345677889999999 55599999998654       466654


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcCCC
Q 026983          156 FVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA  201 (230)
Q Consensus       156 ~~~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~  201 (230)
                      ++.   ....+++++++.|++.+..... +...||+||+++++.++
T Consensus       185 l~~---~~~~~~~~~~~~l~~~~~~~~~-~~~~DDiTvlvv~~~~~  226 (242)
T 3pu9_A          185 RVA---GPETPAQAIADELLEAALVADD-GRAGDDMTVVVLRLRNV  226 (242)
T ss_dssp             HHC---CTTCCHHHHHHHHHHHHHHHTT-TSCSSCEEEEEEEEEEC
T ss_pred             HHh---ccCCCHHHHHHHHHHHHHHhcC-CCCCCCeEEEEEEEecC
Confidence            332   1246899999999999887431 23679999999999764


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.62  E-value=4.5e-15  Score=123.81  Aligned_cols=136  Identities=21%  Similarity=0.163  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEecc-ccEEEEeCCeeeecCCCCCCCcHHHHHHHHH
Q 026983            5 QHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGD-SRCVLSRKGQALNLSKDHKPDLEVEKDRILK   81 (230)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGD-Sr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~   81 (230)
                      ....++.++..+.+.      ...+++|+++++++  .++++++|+|+ ++.|++++|++.+++.++.+           
T Consensus       108 p~~~l~~ln~~l~~~------~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~-----------  170 (255)
T 3f79_A          108 PSEVLAHINRGLINT------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-----------  170 (255)
T ss_dssp             HHHHHHHHHHHHBTT------BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC---------------
T ss_pred             HHHHHHHHHHHHHhc------CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------
Confidence            455677777777642      23689999999996  67899999999 56899999999999876542           


Q ss_pred             cCCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHH-------HH
Q 026983           82 AGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQE-------LV  154 (230)
Q Consensus        82 ~~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~-------i~  154 (230)
                                         +|-..              ...++...+++.+|| .|+||||||++.++.++       +.
T Consensus       171 -------------------lG~~~--------------~~~~~~~~~~l~~gd-~lll~TDGl~e~~~~~~~~~g~~~l~  216 (255)
T 3f79_A          171 -------------------VGLFD--------------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLP  216 (255)
T ss_dssp             --------------------CCSS--------------CCCCCC---BCCSSE-EEEEECSCCCCCSCC---CCTTTSSH
T ss_pred             -------------------EEEcC--------------CCceEEEEEEECCCC-EEEEECCCcCcccCCCcchhhHHHHH
Confidence                               34332              245567788999999 55599999999998777       88


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcC
Q 026983          155 DFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK  199 (230)
Q Consensus       155 ~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~  199 (230)
                      +++...   ...++.+++.+. .+..    ++..||+||++++..
T Consensus       217 ~~l~~~---~~~~~~~~~~l~-~~~~----~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          217 EQVAAA---GGTLDGLRQVFG-LANL----AEMPDDIALLVLSRN  253 (255)
T ss_dssp             HHHHHH---SCSSHHHHHHC----------CCSSSCEEEEEEEEC
T ss_pred             HHHHhc---CCCHHHHHHHHH-hccC----CCCCCCEEEEEEEec
Confidence            887653   346778887776 3333    678899999999864


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.53  E-value=1.1e-13  Score=111.03  Aligned_cols=127  Identities=13%  Similarity=0.121  Sum_probs=95.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEeCCeeeecCCCCCCCcHHHHHHHHHc
Q 026983            5 QHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSRKGQALNLSKDHKPDLEVEKDRILKA   82 (230)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~~~~~~~lT~dh~~~~~~~~~r~~~~   82 (230)
                      ..+.++.+++.+..         ..|+|++++.++  .+++.++|+|+++.|+++++....+....              
T Consensus        65 p~~il~~ln~~l~~---------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~--------------  121 (193)
T 3zt9_A           65 LVNIFQLCHRELRG---------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATP--------------  121 (193)
T ss_dssp             HHHHHHHHHHHHTT---------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBC--------------
T ss_pred             HHHHHHHHHHHHhc---------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCC--------------
Confidence            45667777776642         246788888887  67899999999999999998776653211              


Q ss_pred             CCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCHHHHHHHHHHHhc
Q 026983           83 GGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLT  162 (230)
Q Consensus        83 ~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~  162 (230)
                                +      .+|...              ...+...++++.+|| .|+|+|||+++.+..+++..++     
T Consensus       122 ----------g------~lG~~~--------------~~~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~~~-----  165 (193)
T 3zt9_A          122 ----------G------ILGYNY--------------PHQLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLANY-----  165 (193)
T ss_dssp             ----------C------BBTTBC--------------CSSCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGGCT-----
T ss_pred             ----------C------ceeccC--------------CccceeEEeccCCCC-EEEEECCCCCCccChhhhhchh-----
Confidence                      1      234221              125567789999999 5669999999999988776543     


Q ss_pred             CCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEE
Q 026983          163 NETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQ  197 (230)
Q Consensus       163 ~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~  197 (230)
                       ..+++++|+.|++.+.      ...||+||+|++
T Consensus       166 -~~~~~~~a~~l~~~~~------~~~Dd~tvlv~r  193 (193)
T 3zt9_A          166 -RLTAEELVRLIGEKYG------RRDDDVAVIVAR  193 (193)
T ss_dssp             -TSCHHHHHHHHHHHHC------CTTSCEEEEEEC
T ss_pred             -cCCHHHHHHHHHHHhC------cCCCCeEEEEEC
Confidence             3589999999999863      257999999975


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.07  E-value=3.4e-09  Score=93.85  Aligned_cols=142  Identities=14%  Similarity=0.180  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEeccccEEEEe-CCeeeecCCCCCCCcHHHHHHHHH
Q 026983            5 QHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSRCVLSR-KGQALNLSKDHKPDLEVEKDRILK   81 (230)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr~~l~~-~~~~~~lT~dh~~~~~~~~~r~~~   81 (230)
                      ..+.++.++. +....     ...+++|++++.++  .+++.++++|.++.|+++ +|....+..++.+           
T Consensus       100 p~~il~~ln~-~~~~~-----~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~-----------  162 (399)
T 3ke6_A          100 VVEALEAVDR-FHKQV-----PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG-----------  162 (399)
T ss_dssp             HHHHHHHHHH-HGGGS-----TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC-----------
T ss_pred             HHHHHHHHHH-HHHhc-----CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc-----------
Confidence            3455666655 33221     23588999999997  678999999999999998 6777777654421           


Q ss_pred             cCCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCH------HHHHH
Q 026983           82 AGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSS------QELVD  155 (230)
Q Consensus        82 ~~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~------~~i~~  155 (230)
                                        .+|-.                ..+....+.+.+|| .|+|+|||+++....      +.+.+
T Consensus       163 ------------------plG~~----------------~~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~  207 (399)
T 3ke6_A          163 ------------------PLGSG----------------TGFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFAD  207 (399)
T ss_dssp             ------------------CTTSS----------------CCCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHH
T ss_pred             ------------------ceECC----------------CCceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHH
Confidence                              23321                12345678999999 556999999998764      45566


Q ss_pred             HHHHHhc---------CCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcCCC
Q 026983          156 FVRDQLT---------NETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA  201 (230)
Q Consensus       156 ~~~~~~~---------~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~~~  201 (230)
                      ++.+...         ....++.+++.+++....   ..+..||+||+++++..+
T Consensus       208 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~DDitvl~vr~~~~  259 (399)
T 3ke6_A          208 LAASIASGSGGFVLDAPARPIDRLCSDTLELLLR---STGYNDDVTLLAMQRRAP  259 (399)
T ss_dssp             HHHHHTC----------CCHHHHHHHHHHHHHHH---TTCCSSCEEEEEEEECCC
T ss_pred             HHHHhhcccccccccChhhHHHHHHHHHHHHhcc---CCCCCCceEEEEEEeeCC
Confidence            6554321         122344455555543322   145679999999999864


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.50  E-value=1e-06  Score=77.27  Aligned_cols=137  Identities=21%  Similarity=0.151  Sum_probs=83.3

Q ss_pred             cHHHHHHHHHHHHhcCCCCCCCCCCCcceeEEEEEE--CCeEEEEEecccc-EEEEeCCeeeecCCCCCCCcHHHHHHHH
Q 026983            4 KQHGFLRYLINRLLIGPHSDFHGPTSGSTACVAIIR--DKQLVVANAGDSR-CVLSRKGQALNLSKDHKPDLEVEKDRIL   80 (230)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~--~~~l~ianvGDSr-~~l~~~~~~~~lT~dh~~~~~~~~~r~~   80 (230)
                      ...+.++.++..+.+..      ..+..|+++++++  .+++.++|+|-.. .++.++|.+..+.....           
T Consensus       246 ~p~~~l~~ln~~l~~~~------~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~-----------  308 (394)
T 3eq2_A          246 KPSEVLAHINRGLINTK------LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGL-----------  308 (394)
T ss_dssp             CHHHHHHHHHHHHHHTT------CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC-------------
T ss_pred             CHHHHHHHHHHHHhccC------cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCc-----------
Confidence            46677888888887531      2467899998887  6789999999754 77788898887753222           


Q ss_pred             HcCCEEEecccCCccceeeccCCccccccCCCCCCCCceeeeceEEEEEecCCCeEEEEEcCCCcCcCCH-------HHH
Q 026983           81 KAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSS-------QEL  153 (230)
Q Consensus        81 ~~~~~~~~~~~~g~~~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~gd~~lIl~SDGv~d~l~~-------~~i  153 (230)
                                         .+|-..              .......++.+.+|| .|+|.|||+.+....       +.+
T Consensus       309 -------------------plG~~~--------------~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l  354 (394)
T 3eq2_A          309 -------------------PVGLFD--------------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASL  354 (394)
T ss_dssp             -------------------CCSCCC--------------CC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTTTTS
T ss_pred             -------------------eeEecC--------------CCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhHHHH
Confidence                               233222              233456678999999 566999999997443       344


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHhhcCCCCCCCCCCeeEEEEEcC
Q 026983          154 VDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK  199 (230)
Q Consensus       154 ~~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~~~~~DN~Tvivi~~~  199 (230)
                      .+.+...   ...++.++    +.... +......||+||++++.+
T Consensus       355 ~~~l~~~---~~~~~~l~----~~~~~-~~~~~~~DDit~l~i~~~  392 (394)
T 3eq2_A          355 PEQVAAA---GGTLDGLR----QVFGL-ANLAEMPDDIALLVLSRN  392 (394)
T ss_dssp             HHHHHTT---C--CHHHH----HHHSC-CCSCC--CCCEEEEEC--
T ss_pred             HHHHHhc---chhHHHHH----HHhcc-cCCCCCCCceEEEEEecc
Confidence            5555441   22333333    33222 223456799999999875


No 25 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=42.38  E-value=0.72  Score=41.95  Aligned_cols=81  Identities=10%  Similarity=0.027  Sum_probs=60.8

Q ss_pred             ceeeccCCccccccCCCCCCCCceeeeceEEEEEecC--CC----eEEEEEcCCCcCcCCHHHHHHHHHHHh-cCCCCHH
Q 026983           96 NLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD--DD----EFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLS  168 (230)
Q Consensus        96 ~~tr~lG~~~~k~~~~~~~~~~~v~~~p~i~~~~l~~--gd----~~lIl~SDGv~d~l~~~~i~~~~~~~~-~~~~~~~  168 (230)
                      .++||+|-..              ..+.++..+.+..  ||    .|+ +++   |+.+...++.+++.+.. ....+.+
T Consensus        43 ~l~~~~~l~~--------------~~~~d~~~~~~~~~ig~~~~~~f~-~t~---~~~~~~~~~~~~i~e~~~~~~~~~~  104 (543)
T 3c4z_A           43 PLSKCEALRE--------------SLDLGFEGMCLEQPIGKRLFQQFL-RTH---EQHGPALQLWKDIEDYDTADDALRP  104 (543)
T ss_dssp             CGGGGHHHHH--------------HSCCCHHHHHTSSHHHHHHHHHHH-HHC---GGGHHHHHHHHHHHHHHTSCTTTHH
T ss_pred             CchHHHHHHh--------------ccccCHHHhhccCcccHHHHHHHH-hcC---CchhHHHHHHhhhhhhccCchhhHH
Confidence            6777877554              4566666667766  77    666 666   78888888888887753 2235788


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCCeeEE----EEEc
Q 026983          169 VICEKVFDRCLAPSAGGEGCDNMTMI----LVQF  198 (230)
Q Consensus       169 ~~a~~l~~~a~~~~~~~~~~DN~Tvi----vi~~  198 (230)
                      ..|+.|++.++.    .+..||++.+    +.++
T Consensus       105 ~~~~~l~~~~~~----~~~~d~~~~~~~~~v~~v  134 (543)
T 3c4z_A          105 QKAQALRAAYLE----PQAQLFCSFLDAETVARA  134 (543)
T ss_dssp             HHHHHHHHHHTS----TTCTTCCTTSCHHHHHHH
T ss_pred             HHHHHHHHHhhC----chhhhhhccCCHHHHhhh
Confidence            999999999998    8899999998    6666


No 26 
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=29.98  E-value=53  Score=27.14  Aligned_cols=27  Identities=26%  Similarity=0.418  Sum_probs=21.6

Q ss_pred             CCCCCcceeEEEEEECCeEEEEEecccc
Q 026983           25 HGPTSGSTACVAIIRDKQLVVANAGDSR   52 (230)
Q Consensus        25 ~~~~~GtT~~~~~i~~~~l~ianvGDSr   52 (230)
                      .+..+|||.+++ +.++.+|..|+|-+.
T Consensus       141 sG~LSGCT~v~A-~K~~~ly~~HtGk~~  167 (295)
T 1hq0_A          141 SGNLSGCTTIVA-RKEGYIYKVHTGTTK  167 (295)
T ss_dssp             CCCBSSCEEEEE-EETTEEEEEEEEESS
T ss_pred             CCcccCcEEEEE-EcCCeEEEEEcCCCC
Confidence            455789988766 579999999999765


No 27 
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=29.10  E-value=43  Score=17.16  Aligned_cols=16  Identities=25%  Similarity=0.364  Sum_probs=13.6

Q ss_pred             cccEEEEeCCeeeecC
Q 026983           50 DSRCVLSRKGQALNLS   65 (230)
Q Consensus        50 DSr~~l~~~~~~~~lT   65 (230)
                      |-.+|+-++|.|+.|+
T Consensus         9 Dg~~Yvr~dg~WV~l~   24 (27)
T 2ww6_A            9 DAQAYVRKFGEWVLLS   24 (27)
T ss_dssp             SSCEEEEETTEEEEGG
T ss_pred             CcceeEEEcCeEEEcc
Confidence            6778999999999885


No 28 
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=23.13  E-value=1.8e+02  Score=19.70  Aligned_cols=51  Identities=18%  Similarity=0.316  Sum_probs=38.9

Q ss_pred             CCCeEEEEEcCCCcCcCCHHHHHHHHHHHhcCC------------CCHHHHHHHHHHHhhcCC
Q 026983          132 DDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE------------TKLSVICEKVFDRCLAPS  182 (230)
Q Consensus       132 ~gd~~lIl~SDGv~d~l~~~~i~~~~~~~~~~~------------~~~~~~a~~l~~~a~~~~  182 (230)
                      ..|.|+||-++-==.+++.+|+..-+...+...            .+..+.|+.|++.+....
T Consensus         8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~CELe   70 (94)
T 2krx_A            8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTSCELD   70 (94)
T ss_dssp             CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHCCCEE
T ss_pred             ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHheeeee
Confidence            456688777766666789999988887776654            578899999999877643


Done!