BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026985
(230 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 183/215 (85%), Gaps = 3/215 (1%)
Query: 1 MSVTCSGSFPDLLCGEDSGIFAGESSPACSSSDLESSASIEESIAGFIEDERNFVPGFDY 60
MSV+ S DL CGEDSG+F+GES+ SSS+++S +SIA FIEDER+FVPG DY
Sbjct: 12 MSVSFSNDM-DLFCGEDSGVFSGESTVDFSSSEVDSWPG--DSIACFIEDERHFVPGHDY 68
Query: 61 LTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQ 120
L+RFQT SLDASARE+SVAWILKVQAYYNF PLT+YL+VNYMDRFLY+RRLP+ +GWP Q
Sbjct: 69 LSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQ 128
Query: 121 LLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFS 180
LL+VACLSLAAKMEE +VPSL D QV G KY+FE KTI+RMELLVLSVLDWRLRSVTPF
Sbjct: 129 LLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFD 188
Query: 181 FIYFFACKLDPTGTFMGFLISRATKIILSNIQGST 215
FI FFA K+DP+GTF+GF IS AT+IILSNI+ ++
Sbjct: 189 FISFFAYKIDPSGTFLGFFISHATEIILSNIKEAS 223
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 207 bits (527), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 17/190 (8%)
Query: 12 LLCGEDSG--IF---------AGESSPACS--SSDLESSASIEESIAGFIEDERNFVPGF 58
LLC ED+G +F E CS +L S+ASI E I G E + P
Sbjct: 11 LLCAEDAGAAVFDVAVDISTCTTEDDECCSVGGEELYSAASIAELIGG----EAEYSPRS 66
Query: 59 DYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWP 118
DY R ++ S+D +AR ESV+WILKVQ Y FLPLT+YL+VNYMDRFL R LP+ GW
Sbjct: 67 DYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWA 126
Query: 119 WQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTP 178
QLL+VACLSLAAKMEET+VPSLLDLQVE ++Y+FE +TI RME L+L+ L+WRLRSVTP
Sbjct: 127 MQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTP 186
Query: 179 FSFIYFFACK 188
F+FI FFACK
Sbjct: 187 FTFIDFFACK 196
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 128/176 (72%), Gaps = 4/176 (2%)
Query: 40 IEESIAGFIEDERNFVPGFDYLTRFQT-HSLDASAREESVAWILKVQAYYNFLPLTSYLS 98
+ E I G E ER+ P DY R ++ D +AR +SVAWILKV+ Y LP+T+YL+
Sbjct: 83 VAELIGG--EAERSHSPRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLA 140
Query: 99 VNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTI 158
V+YMDRFL RLP NGW QLL+V CLSLAAKMEET+VPS+LDLQ+E A+YIFE +TI
Sbjct: 141 VSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYIFEHRTI 199
Query: 159 RRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQGS 214
RMELLVL LDWRLRS+TPF+F+Y FA K+DP G + LI +AT++ L+ I +
Sbjct: 200 FRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLATIHDT 255
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 177 bits (448), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 107/137 (78%), Gaps = 1/137 (0%)
Query: 76 ESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEE 135
ESV+WILKV++ + F P T+YL+V+YMDRF+ SR LPD+ GW QLL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPDH-GWASQLLCVACLSLAAKMEE 185
Query: 136 TVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTF 195
+ P LLDLQ+EG ++IFE +TI+RMEL+VL LDWRLRSVTPF+F+ FFACK+ +G
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 196 MGFLISRATKIILSNIQ 212
L RA +IILS I
Sbjct: 246 SRILALRACQIILSAIH 262
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 119/173 (68%), Gaps = 2/173 (1%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
E+ I + E F PG DY+ R + LD S R +++ WILKV A+Y+F L LS+N
Sbjct: 64 EDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMN 123
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL S LP + W QLL+V+CLSLA+KMEET VP ++DLQVE K++FE KTI+R
Sbjct: 124 YLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKR 183
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQG 213
MELLV++ L+WRL+++TPFSFI +F K+ +G LI R+++ IL+ +
Sbjct: 184 MELLVVTTLNWRLQALTPFSFIDYFVDKI--SGHVSENLIYRSSRFILNTTKA 234
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 125/198 (63%), Gaps = 5/198 (2%)
Query: 22 AGESSPACSS-SDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHS----LDASAREE 76
AG P C + ++ + EE +A +E E + +P DY R + LD R +
Sbjct: 46 AGPPPPPCVDVAGVDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMD 105
Query: 77 SVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEET 136
++ WI KV +YY+F PLT+ L+VNY+DRFL +LPD W QLL+VACLSLAAKMEET
Sbjct: 106 AIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEET 165
Query: 137 VVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFM 196
VP LDLQV +Y+FE KTI+RMELLVLS L WR+++VTPFS++ +F +L+
Sbjct: 166 DVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPS 225
Query: 197 GFLISRATKIILSNIQGS 214
G ++++IL +G+
Sbjct: 226 GRSALLSSELILCIARGT 243
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHS--LDASAREESVAWILKVQAYYNFLPLTSYLS 98
EE +A +E E+ +P DY R + +D R E++ WI +V YYNF +T+YL+
Sbjct: 75 EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSVTAYLA 134
Query: 99 VNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTI 158
VNY+DRFL LP+ W QLLSVACLS+AAKMEETVVP LDLQ+ +++FE +TI
Sbjct: 135 VNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLFEVETI 194
Query: 159 RRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQGS 214
RMELLVL+ L+WR+++VTPFS+I +F KL+ + R++++IL G+
Sbjct: 195 HRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIAAGT 250
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 106/150 (70%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
+E +A +E E + P YL + + L+ S R++++ WI KV +YYNF PL+ YL+VN
Sbjct: 62 DEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVN 121
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL S LP + W QLLSV+CLSLA KMEETVVP +DLQV A+Y+FE + I+R
Sbjct: 122 YLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKR 181
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLD 190
MEL+V+ L WRL++VTPFSFI +F K +
Sbjct: 182 MELIVMKTLKWRLQAVTPFSFIGYFLDKFN 211
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
Query: 40 IEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSV 99
+E+ + +E R +YLT+ ++ S R ++ WI KVQAYY+F PL +YL+V
Sbjct: 75 MEKEVEQMVETARG-----EYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAV 129
Query: 100 NYMDRFLYSRRLPDNNGWPW--QLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKT 157
NY+DRFL S N PW QLL VACLSLAAKMEET P LDLQV +Y+F+ +T
Sbjct: 130 NYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAET 189
Query: 158 IRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQGSTIY 217
I RME++VL+ L WR+++VTPF++I F K++ LISR T+IILS ++ +T++
Sbjct: 190 IHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMK-ATVF 248
Query: 218 I 218
+
Sbjct: 249 L 249
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 160 bits (404), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 15/213 (7%)
Query: 12 LLCGE----DSGIFAGESSPACSSSDLE-SSASIEESIAGFIEDERNFVPGFDYLTRFQT 66
LLC E D G+ E+ S + S + EE I +E E+ +P DY+ R ++
Sbjct: 10 LLCTESNVDDEGMIVDETPIEISIPQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRS 69
Query: 67 HSLDAS-AREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVA 125
LD + R +++ WI K + F PL L++NY+DRFL LP GW QLL+VA
Sbjct: 70 GDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVA 129
Query: 126 CLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF 185
CLSLAAK+EET VP L+DLQV +++FE K+++RMELLVL+ L WRLR++TP S+I +F
Sbjct: 130 CLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYF 189
Query: 186 -----ACKLDPTGTFMGFLISRATKIILSNIQG 213
C +P+ T LISR+ ++I S +G
Sbjct: 190 LRKMSKCDQEPSNT----LISRSLQVIASTTKG 218
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 41 EESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVN 100
EE + IE ER P DYL R + LD + R +++ WI K F PL L++N
Sbjct: 36 EEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMN 95
Query: 101 YMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR 160
Y+DRFL LP W QLL+VACLSLAAK+EET VP L+ LQV ++FE K+++R
Sbjct: 96 YLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQR 155
Query: 161 MELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTF-MGFLISRATKIILSNIQG 213
MELLVL+VL WRLR+VTP S++ +F K++ L++R+ ++I S +G
Sbjct: 156 MELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 50 DERNFVPGFDYLTRF--QTHSLD-ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFL 106
+E+ +P YL R Q LD + R +++ WI KV Y F PLT+ LSVNY+DRFL
Sbjct: 63 EEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFL 122
Query: 107 YSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVL 166
LP QLL+VA LSLAAKMEETVVP LDLQV AKY+FET+TI+RMEL VL
Sbjct: 123 SVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVL 182
Query: 167 SVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNIQ 212
+ L WR+++VT SFI ++ K + T +SR+ +ILS +
Sbjct: 183 NALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCK 228
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 92/141 (65%)
Query: 74 REESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKM 133
RE+++ WI KV+++Y F LT+ L+VNY DRF+ SR+ + W QL ++ACLSLAAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 134 EETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTG 193
EE VP LLD QVE A+Y+FE KTI+RMELLVLS LDWR+ VTP SF +
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS 205
Query: 194 TFMGFLISRATKIILSNIQGS 214
+SR ++LS I S
Sbjct: 206 HHQLEFLSRCESLLLSIIPDS 226
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 96/144 (66%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLA 130
++ R+E+V WIL+V A+Y F L + L++ Y+D+F+ S L + W QL+SVACLSLA
Sbjct: 84 STDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLA 143
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLD 190
AK+EET VP LLD QVE KY+FE KTI+RMELL+LS L+W++ +TP SF+ +L
Sbjct: 144 AKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLG 203
Query: 191 PTGTFMGFLISRATKIILSNIQGS 214
+++ +++LS I S
Sbjct: 204 LKNNAHWDFLNKCHRLLLSVISDS 227
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 130 bits (327), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 84/111 (75%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLA 130
S R+E++ W+L+V+++Y F LT+ L+VNY DRF+ S +L + W QL++VA LSLA
Sbjct: 93 VSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLA 152
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSF 181
AK+EE VP LLDLQVE A+Y+FE KTI+RMELL+LS L WR+ VTP SF
Sbjct: 153 AKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISF 203
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Query: 73 AREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPW--QLLSVACLSLA 130
AR +V WIL+ + Y+ F T+YL++ Y DRF RR+ D PW +LLS+AC+S+A
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRV-DREAMPWAARLLSIACVSVA 157
Query: 131 AKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKL 189
AKMEE P+L + G + +F + +IRRMELLVLS L WR+ +VTPF F+ F+ +L
Sbjct: 158 AKMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRL 215
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 71 ASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPW--QLLSVACLS 128
A AR +V WIL+ + + F T+YL++ Y DRF RR D + PW +LL+VAC+S
Sbjct: 106 ALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCL-RRCIDRSVMPWAARLLAVACVS 164
Query: 129 LAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI 182
LAAKMEE P+L + + V Y F IRRMELLVLS LDWR+ +VTPF ++
Sbjct: 165 LAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYL 220
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 21/175 (12%)
Query: 35 ESSASIEESIAGFIEDERNFVPGF-------DYLT--------RFQT---HSLDASAREE 76
ES +S+ E IE P F DY+ RF+T + +S R
Sbjct: 15 ESESSLNEDDDETIERSDKQEPHFTTTIDDEDYVADLVLKENLRFETLPSKTTSSSDRLI 74
Query: 77 SVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSR--RLPDNNGWPWQLLSVACLSLAAKME 134
++ WIL + + F T+Y++++Y D FL+ R L + W +LLSVACLSLAAKME
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 135 ETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKL 189
E +VP L + ++F+ IR+ ELL+LS LDW++ +TPF + +F K+
Sbjct: 135 ERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKI 188
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 72 SAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAA 131
+AR V WI+K A + F T+Y++V Y+DRFL R + + W QLLSVACLSLAA
Sbjct: 98 NARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAA 157
Query: 132 KMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFFACK 188
K+EE P L + +++ +++ ++ RMELLVL+ L W++ + TPFS++ F K
Sbjct: 158 KVEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAK 210
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 51 ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRR 110
E +P Y ++ + S R ++++ I + ++ LT YL+VNY+DRFL S
Sbjct: 35 EFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSED 93
Query: 111 LPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLD 170
+P + W +L+S++C+SL+AKM + + S+ DL VEG F+ + I RME ++L L
Sbjct: 94 MPQSKPWILKLISLSCVSLSAKMRKPDM-SVSDLPVEGE--FFDAQMIERMENVILGALK 150
Query: 171 WRLRSVTPFSFIYFF 185
WR+RSVTPFSF+ FF
Sbjct: 151 WRMRSVTPFSFLAFF 165
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 78/121 (64%), Gaps = 5/121 (4%)
Query: 92 PLTSYLSVNYMDRFLYSRRLP-DNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAK 150
P +YL++NY+DR+L R+L + N W +LL+++CL+LAAKM+ S D+Q G +
Sbjct: 76 PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ-RGEE 134
Query: 151 YIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTG-TFMGFLISRATKII 207
++F+ I+RME +VL+ L+WR RSVTP +F+ FF AC P + + +RA ++
Sbjct: 135 FMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLL 194
Query: 208 L 208
L
Sbjct: 195 L 195
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 8/119 (6%)
Query: 72 SAREESVAWILKVQAYYNFLPLTSYLSVNYMDR-FLYSRRLPDNNGWPWQLLSVACLSLA 130
SARE +V W L+ A F LT+ L+V Y+DR FL + W +L +VAC++LA
Sbjct: 76 SAREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVALA 135
Query: 131 AKMEETVVPSLLDLQVEGAK-------YIFETKTIRRMELLVLSVLDWRLRSVTPFSFI 182
AK+EET VP LLDLQ+ A+ Y+FE KT+RRMELLVLS L WR+ VTP S++
Sbjct: 136 AKVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYL 194
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 80.5 bits (197), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 94 TSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGA-KYI 152
T++ + NY+DRFL W +++SV CLSLA K++E +PSL DLQ+E A +
Sbjct: 105 TAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMGHS 164
Query: 153 FETKTIRRMELLVLSVLDWRLRSVTPFSFI 182
F TIR MEL +L L WRL VTPFSF+
Sbjct: 165 FRASTIRDMELTLLKALRWRLACVTPFSFL 194
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 36 SSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTS 95
+A++EE+IA +E E F D F R + W+++ ++ N T
Sbjct: 40 DAATMEEAIAMDLEKELCFNNHGDKFVEFFVSKKLTDYRFHAFQWLIQTRSRLNLSYETV 99
Query: 96 YLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFET 155
+ + N DRF+Y + W +L++V LS+A+K E P L +L++EG ++F
Sbjct: 100 FSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHV 159
Query: 156 KTIRRMELLVLSVLDWRLRSVTPFSFIYFFACKLDPTGTFMGFLISRATKIILSNI 211
T+ +MEL++L L+WR+ +VT ++F K+ G M +++R T +L I
Sbjct: 160 NTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHM--IMNRITNHLLDVI 213
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 51 ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRR 110
E N P DY+ R Q+ S++AS R + W+++V Y P T YL+VNY+DR+L
Sbjct: 190 EVNKRPALDYMERTQS-SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNA 248
Query: 111 LPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR----MELLVL 166
+ N QLL V C+ +AAK EE VP QVE YI + +R ME VL
Sbjct: 249 I---NKQNLQLLGVTCMMIAAKYEEVCVP-----QVEDFCYITDNTYLRNELLEMESSVL 300
Query: 167 SVLDWRLRSVTPFSFIYFF 185
+ L + L + T F+ F
Sbjct: 301 NYLKFELTTPTAKCFLRRF 319
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P D++ Q ++D S R + W+++V Y +P T YL+VNY+DR+L S+ + N
Sbjct: 101 PSTDFVETIQK-NIDTSMRAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVI---N 156
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYI----FETKTIRRMELLVLSVLDW 171
QLL VACL +A+K EE P QVE YI + + +ME VL L +
Sbjct: 157 RRKMQLLGVACLLIASKYEEICPP-----QVEELCYISDNTYTKDEVLKMEASVLKYLKF 211
Query: 172 RLRSVTPFSFIYFF 185
+ + T F+ F
Sbjct: 212 EMTAPTTKCFLRRF 225
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 49 EDERNFVPGFDYLTRFQT-HSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLY 107
E E +P +YL Q+ + L +S R + W+++V ++ LP T +L++N +DRFL
Sbjct: 130 EKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCLPETLFLAINLLDRFLS 189
Query: 108 SRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLV 165
+ N QLL + CL +A K EE +P + + +GA + + IR+ EL V
Sbjct: 190 QNVVKLNK---LQLLCITCLFIACKFEEVKLPKITNFAYVTDGAATV---EGIRKAELFV 243
Query: 166 LSVLDWRLRSVTPFSFI 182
LS L + + P +FI
Sbjct: 244 LSSLGYNISLPNPLNFI 260
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P DY+ R Q +++S R V W+++V Y +P T YL+VNY+DR+L + +
Sbjct: 211 PDVDYMERVQK-DVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVI---S 266
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELLVLSVLDW 171
QLL VAC+ +AAK EE P QVE YI + ++ ME VL+ L +
Sbjct: 267 RQKLQLLGVACMMIAAKYEEICAP-----QVEEFCYITDNTYLKDEVLDMESDVLNYLKF 321
Query: 172 RLRSVTPFSFIYFF 185
+ + T F+ F
Sbjct: 322 EMTAPTTKCFLRRF 335
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 250 EAETRKRPSTDFMETIQ-KDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 308
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK EE P QVE YI + R ME
Sbjct: 309 NEI---NRQRLQLLGVACMLIAAKYEEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 360
Query: 165 VLSVLDWRLRSVTPFSFIYFF 185
VL+ L + + + T F+ F
Sbjct: 361 VLNYLKFEVTAPTAKCFLRRF 381
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 220 EAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 278
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK EE P QVE YI + R ME
Sbjct: 279 NEI---NRQRLQLLGVACMLIAAKYEEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 330
Query: 165 VLSVLDWRLRSVTPFSFIYFF 185
VL+ L + + + T F+ F
Sbjct: 331 VLNYLKFEVTAPTAKCFLRRF 351
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
+ E + P +Y+ R QT +++S R + W+++V Y +P T YLSV+Y+DRFL
Sbjct: 175 KSEAKYRPKSNYM-RKQT-DINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSH 232
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSV 168
+ QL+ AC+ +AAK EE P + + V + K + RME L+L
Sbjct: 233 MSVLRGK---LQLVGAACMLVAAKFEEIYPPEVAEF-VYITDDTYTAKQVLRMEHLILKT 288
Query: 169 LDWRLRSVTPFSFI--YFFACKLDPTGTFMGFLISRATKIILSNIQGSTIY 217
L + L T F+ Y FA P + +L +++ L N S Y
Sbjct: 289 LAFDLSVPTCRDFLSRYLFAANAKPESQ-LKYLAEYLSELTLINCDISVKY 338
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 49 EDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYS 108
E E P D++ Q ++ S R + W+++V Y +P T YL+VNY+DR+L
Sbjct: 233 EAETRKHPSTDFMETLQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSG 291
Query: 109 RRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR----RMELL 164
+ N QLL VAC+ +AAK +E P QVE YI + R ME
Sbjct: 292 NEI---NRQRLQLLGVACMLIAAKYKEICAP-----QVEEFCYITDNTYFRDEVLEMEAS 343
Query: 165 VLSVLDWRLRSVTPFSFIYFF 185
VL+ L + + + T F+ F
Sbjct: 344 VLNYLKFEMTAPTAKCFLRRF 364
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 44 IAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMD 103
+ ++ E N++P +Y Q + R+ W+L+V L++NY+D
Sbjct: 28 LQTMLKAEENYLPSPNYFKCVQKEIV-PKMRKIVATWMLEVCEEQKCEEEVFPLAMNYLD 86
Query: 104 RFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR---- 159
RFL + QLL C+ LA+KM+ETV + L I+ ++R
Sbjct: 87 RFL---SVEPTKKTRLQLLGATCMFLASKMKETVPLTAEKL------CIYTDNSVRPGEL 137
Query: 160 -RMELLVLSVLDWRLRSVTPFSFIYFFACKL 189
+MELL L+ L W L SVTP FI F KL
Sbjct: 138 LQMELLALNKLKWDLASVTPHDFIEHFLAKL 168
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
V W++ V + P T YL+VN +DRFL + +P QL+ ++ L ++AK EE
Sbjct: 201 VEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKE---LQLVGLSALLMSAKYEEIW 257
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF 185
P + DL V+ A + + K I ME +LS L+W L T + F+ F
Sbjct: 258 PPQVEDL-VDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARF 304
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 46 GFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRF 105
G + ER F + R H + R + V WIL V A F P T+ +++ Y DR
Sbjct: 82 GLLARERETHGSFVFDARAAHH---CAFRSQLVEWILDVCAGERFGPTTADVAIAYTDRV 138
Query: 106 LYSRRLPDNNGWPWQLLSVACLSLAAKMEE--TVVPSLLDLQVEGAKYIFETKTIRRMEL 163
L +P + L+++ CL +A K EE VP++ L+ ++ + IR+MEL
Sbjct: 139 LSKTVVPKTS---LHLVALCCLHIAVKYEEIEERVPTMSKLR-SWTSNMYSPEIIRKMEL 194
Query: 164 LVLSVLDWRLRSVTPFSFIYFF 185
VL L W L +TP F+ F
Sbjct: 195 AVLIELGWDLGVLTPAHFLESF 216
>sp|P24868|CG21_YEAST G2/mitotic-specific cyclin-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLB1 PE=1 SV=1
Length = 471
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 58 FDYLTRFQ-----------THSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFL 106
FDYL + H R+ V WI+K+ + LP T YL++N MDRFL
Sbjct: 214 FDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFL 273
Query: 107 YSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDL--QVEGAKYIFETKTIRRMELL 164
+ N QL+ +CL +A+K EE PS+ + +GA + + I+ E
Sbjct: 274 CEEVVQLNR---LQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSV---EDIKEGERF 327
Query: 165 VLSVLDWRLRSVTPFSFI 182
+L LD+++ P +F+
Sbjct: 328 ILEKLDFQISFANPMNFL 345
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 28 ACSSSDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAY 87
A S + L ++ +EE + E+E DY++ ++ R + W+++V
Sbjct: 143 ADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMS--SQGDINEKMRAILIDWLIEVHHK 200
Query: 88 YNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVE 147
+ + T +L+VN +DRFL + +P QL+ V + LA K EE VP + DL V
Sbjct: 201 FELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDL-VL 256
Query: 148 GAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLI 200
+ + I ME L+L+ L + + TP+ F+ F A + D + F I
Sbjct: 257 ISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFI 311
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 28 ACSSSDLESSASIEESIAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAY 87
A S + L ++ +EE + E+E DY++ ++ R + W+++V
Sbjct: 143 ADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMS--SQGDINEKMRAILIDWLIEVHHK 200
Query: 88 YNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVE 147
+ + T +L+VN +DRFL + +P QL+ V + LA K EE VP + DL V
Sbjct: 201 FELMDETLFLTVNIVDRFLEKQVVPRKK---LQLVGVTAMLLACKYEEVAVPVVEDL-VL 256
Query: 148 GAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLI 200
+ + I ME L+L+ L + + TP+ F+ F A + D + F I
Sbjct: 257 ISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQLLSFFI 311
>sp|P24865|CG21_SCHPO G2/mitotic-specific cyclin cig1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cig1 PE=1 SV=2
Length = 415
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 30 SSSDLESSASI----EESIAGFIED-ERNFVPGFDYLTRFQTHSLDASAREESVAWILKV 84
S D+E+ S+ + I +++ ER P +Y++ Q +D R V WI++V
Sbjct: 149 SPEDIETDPSMVPDYDPEIFHYMQSLERKLAPPPNYMSVQQ--EIDWVTRHMLVDWIVQV 206
Query: 85 QAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDL 144
Q ++ LP T +L+VN +DRFL + + + QL+ ++ L +A K EE PS+ +
Sbjct: 207 QIHFRLLPETLFLAVNLIDRFLSIKVV---SLQKVQLVGLSALLIACKYEEIHPPSIYNF 263
Query: 145 Q--VEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI 182
V+G IF I R E +L +LD+ + P SF+
Sbjct: 264 AHVVQG---IFTVDEIIRAERYMLMLLDFDISWPGPMSFL 300
>sp|Q9DGA4|CCNB1_ORYCU G2/mitotic-specific cyclin-B1 OS=Oryzias curvinotus GN=ccnb1 PE=2
SV=1
Length = 401
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 48 IEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLY 107
+E E++ P + + + + R + W+++V + LP T Y++V +DRFL
Sbjct: 151 LEVEQSVKPNY-----LEGQEVTGNMRAILIDWLVQVSLKFRLLPETMYMTVGIIDRFLQ 205
Query: 108 SRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLS 167
+P QL+ V + LA+K EE P + D + + T IR ME+ VL
Sbjct: 206 DHPVPKKQ---LQLVGVTAMFLASKYEEMYPPEISDFAFVTDR-AYTTAQIRDMEMTVLR 261
Query: 168 VLDWRLRSVTPFSFI 182
VL ++L P F+
Sbjct: 262 VLKFQLGRPLPLQFL 276
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 44 IAGFIEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMD 103
+ ++ E P Y Q L + R+ W+L+V L++NY+D
Sbjct: 26 LQTMLKAEETSCPSMSYFKCVQKEIL-PNMRKIVATWMLEVCEEQKCEEEVFPLAMNYLD 84
Query: 104 RFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRR--- 160
RFL P W QLL C+ LA+KM+ET+ + L I+ +IR
Sbjct: 85 RFLSVE--PLRKSW-LQLLGATCMFLASKMKETIPLTAEKL------CIYTDNSIRPDEL 135
Query: 161 --MELLVLSVLDWRLRSVTPFSFIYFFACKL 189
MEL VL+ L W L SVTP FI F K+
Sbjct: 136 LIMELRVLNKLKWDLASVTPHDFIEHFLNKM 166
>sp|P30283|CGS5_YEAST S-phase entry cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB5 PE=1 SV=1
Length = 435
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 55 VPGFDYL-TRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPD 113
+P +YL + + L S R V W+++V + P T +LS+N MDRFL ++
Sbjct: 178 LPSHNYLLDKTSKYYLRPSMRTILVDWLVEVHEKFQCYPETLFLSINLMDRFLAKNKVTM 237
Query: 114 NNGWPWQLLSVACLSLAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLVLSVLDW 171
N QLL+V L +AAK EE +P L + +GA I+ E+ +L+ L++
Sbjct: 238 N---KLQLLAVTSLFIAAKFEEVNLPKLAEYAYITDGAA---SKNDIKNAEMFMLTSLEF 291
Query: 172 RLRSVTPFSFIYFF--ACKLDPTGTFMGFLI 200
+ P +F+ A DP +G I
Sbjct: 292 NIGWPNPLNFLRRISKADDYDPVNRNIGKFI 322
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 43 SIAGFIEDERNFVPGFDYL----TRFQTHSLDASAREES--VAWILKVQAYYNFLPLTSY 96
++ +IED + +YL + LD + R + V W+++V ++ + T +
Sbjct: 66 AVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLF 125
Query: 97 LSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETK 156
L+VN +DRFL + + QL+ + + LA K EE VP + DL + A + K
Sbjct: 126 LTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLACKYEEVSVPVVSDL-IHIADRAYTRK 181
Query: 157 TIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLI 200
I ME L+L+ L + + T + F+ F A + D + F +
Sbjct: 182 DILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFL 227
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 43 SIAGFIEDERNFVPGFDYLT----RFQTHSLDASAREES--VAWILKVQAYYNFLPLTSY 96
++ +IED + +YL + LD + R + V W+++V ++ + T +
Sbjct: 172 AVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLF 231
Query: 97 LSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETK 156
L+VN +DRFL + + QL+ + + LA K EE VP + DL + A + K
Sbjct: 232 LTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLACKYEEVSVPVVSDL-IHIADRAYTRK 287
Query: 157 TIRRMELLVLSVLDWRLRSVTPFSFIYFF--ACKLDPTGTFMGFLI 200
I ME L+L+ L + + T + F+ F A + D + F +
Sbjct: 288 DILEMEKLMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFL 333
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 69 LDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLS 128
+D R + W+++V ++ P T YL+VN +DRFL + +P QL+ V+ L
Sbjct: 186 IDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRE---LQLVGVSALL 242
Query: 129 LAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIYFF 185
+A+K EE P + DL V + ++ I ME +L L+W L T + F+ F
Sbjct: 243 IASKYEEIWPPQVNDL-VYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRF 298
>sp|Q75I54|CCA31_ORYSJ Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1
Length = 373
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 56 PGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNN 115
P DY+ Q + A+ R V W+++V Y + T YL+V+Y+DRFL ++ + N
Sbjct: 122 PAADYIETVQV-DVTANMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSI---N 177
Query: 116 GWPWQLLSVACLSLAAKMEETVVPSLLDL-QVEGAKYIFETKTIRRMELLVLSVLDWRLR 174
QLL V+ + +A+K EE P++ D + Y+ + + +ME +L+VL + +
Sbjct: 178 RQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYM--KQEVVKMERDILNVLKFEMG 235
Query: 175 SVTPFSFIYFF 185
+ T +F+ F
Sbjct: 236 NPTTKTFLRMF 246
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 41 EESIAGFIED-ERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSV 99
+E I ++ + E P Y+ R + S R V W+++V Y T +L+V
Sbjct: 169 QEDIHTYLREMEVKCKPKVGYMKR--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAV 226
Query: 100 NYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIR 159
NY+DRFL S + QL+ A + LA+K EE P + + V + K +
Sbjct: 227 NYIDRFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVL 282
Query: 160 RMELLVLSVLDWRLRSVTPFSFI--YFFA-----CKLDPTGTFMGFL 199
RME LVL VL + L + T F+ YF CK++ F+G L
Sbjct: 283 RMEHLVLKVLAFDLAAPTVNQFLTQYFLHLQPANCKVESLAMFLGEL 329
>sp|Q9DGA0|CCNB1_ORYJA G2/mitotic-specific cyclin-B1 OS=Oryzias javanicus GN=ccnb1 PE=2
SV=2
Length = 401
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 48 IEDERNFVPGFDYLTRFQTHSLDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLY 107
+E E++ P + Q + + R + W+++V + L T Y++V +DRFL
Sbjct: 150 LEVEQSVKPNY-----LQGQEVTGNMRAILIDWLVQVNLKFRLLQETMYMTVGIIDRFLQ 204
Query: 108 SRRLPDNNGWPWQLLSVACLSLAAKMEETVVPSLLDLQVEGAKYIFETKTIRRMELLVLS 167
+P QL+ V + LA+K EE P + D + + T IR ME+ +L
Sbjct: 205 DHPVPKKQ---LQLVGVTAMFLASKYEEMYPPEISDFAYVTDR-AYTTAQIRDMEMTILR 260
Query: 168 VLDWRLRSVTPFSFI 182
VL ++L P F+
Sbjct: 261 VLKFQLGRPLPLQFL 275
>sp|Q92162|CCNB1_CARAU G2/mitotic-specific cyclin-B1 OS=Carassius auratus GN=ccnb1 PE=2
SV=1
Length = 397
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 78 VAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVACLSLAAKMEETV 137
+ W+++VQ + L T Y++V +DRFL +P QL+ V + +A+K EE
Sbjct: 172 IDWLVQVQIKFKLLQETMYMTVAVIDRFLQDHPVPKKQ---LQLVGVTAMFIASKYEEMY 228
Query: 138 VPSLLDLQVEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFI 182
P + D + + T IR ME+ +L VLD+ P F+
Sbjct: 229 PPEIADFAFVTDR-AYTTGQIRDMEMKILRVLDFSFGKPLPLQFL 272
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 67 HS-LDASAREESVAWILKVQAYYNFLPLTSYLSVNYMDRFLYSRRLPDNNGWPWQLLSVA 125
HS L+ R + W+L+V Y T YL+ ++ DRF+ +++ D N QL+ +
Sbjct: 134 HSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQK--DINKNMLQLIGIT 191
Query: 126 CLSLAAKMEETVVPSLLDLQ--VEGAKYIFETKTIRRMELLVLSVLDWRLRSVTPFSFIY 183
L +A+K+EE P L + +GA + I RMEL++L L W L VT S++
Sbjct: 192 SLFIASKLEEIYAPKLQEFAYVTDGA---CSEEDILRMELIILKALKWELCPVTIISWLN 248
Query: 184 FF 185
F
Sbjct: 249 LF 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,661,893
Number of Sequences: 539616
Number of extensions: 2973618
Number of successful extensions: 6882
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 6645
Number of HSP's gapped (non-prelim): 222
length of query: 230
length of database: 191,569,459
effective HSP length: 114
effective length of query: 116
effective length of database: 130,053,235
effective search space: 15086175260
effective search space used: 15086175260
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)