Your job contains 1 sequence.
>026990
MVGTNLKAEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVR
SERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQ
SASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGDN
LLERLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCHFRML
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026990
(230 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174453 - symbol:AT5G57950 "AT5G57950" species... 699 6.3e-69 1
UNIPROTKB|Q3SZ19 - symbol:PSMD9 "26S proteasome non-ATPas... 164 3.1e-26 2
UNIPROTKB|O00233 - symbol:PSMD9 "26S proteasome non-ATPas... 165 8.2e-26 2
GENEDB_PFALCIPARUM|PFC0785c - symbol:PFC0785c "proteasome... 167 2.0e-21 2
UNIPROTKB|O77379 - symbol:PFC0785c "Proteasome regulatory... 167 2.0e-21 2
DICTYBASE|DDB_G0275753 - symbol:psmD9 "26S proteasome non... 235 9.2e-20 1
POMBASE|SPAC2H10.02c - symbol:SPAC2H10.02c "26S proteasom... 208 6.7e-17 1
UNIPROTKB|Q10920 - symbol:C44B7.1 "Probable 26S proteasom... 129 1.9e-15 2
FB|FBgn0038166 - symbol:CG9588 species:7227 "Drosophila m... 179 7.9e-14 1
CGD|CAL0000640 - symbol:orf19.2301 species:5476 "Candida ... 122 3.0e-13 2
UNIPROTKB|Q59WK1 - symbol:CaO19.1014 "Putative uncharacte... 122 3.0e-13 2
MGI|MGI:1914401 - symbol:Psmd9 "proteasome (prosome, macr... 169 9.1e-13 1
RGD|621110 - symbol:Psmd9 "proteasome (prosome, macropain... 167 1.5e-12 1
SGD|S000001269 - symbol:NAS2 "Proteasome-interacting prot... 157 6.1e-11 1
>TAIR|locus:2174453 [details] [associations]
symbol:AT5G57950 "AT5G57950" species:3702 "Arabidopsis
thaliana" [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR001478 Pfam:PF13180 PROSITE:PS50106
SMART:SM00228 EMBL:CP002688 GO:GO:0000502 SUPFAM:SSF50156
eggNOG:COG0265 KO:K06693 OMA:LLGCNIV EMBL:AY087776 EMBL:BT005246
EMBL:AK118456 IPI:IPI00519434 RefSeq:NP_568872.1 UniGene:At.29304
ProteinModelPortal:Q8LAJ4 SMR:Q8LAJ4 PaxDb:Q8LAJ4 PRIDE:Q8LAJ4
EnsemblPlants:AT5G57950.1 GeneID:835906 KEGG:ath:AT5G57950
TAIR:At5g57950 InParanoid:Q8LAJ4 PhylomeDB:Q8LAJ4
ProtClustDB:CLSN2690040 Genevestigator:Q8LAJ4 Uniprot:Q8LAJ4
Length = 227
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 142/232 (61%), Positives = 178/232 (76%)
Query: 1 MVGTNLKAEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVR 60
MVG NLKAE M+LM+KR+A+E +MN+I++RL GPGLSGNL+DSEGFPR DIDI +VR
Sbjct: 1 MVGANLKAETMALMDKRTAMETEMNSIVERLCNPGGPGLSGNLIDSEGFPREDIDIPMVR 60
Query: 61 SERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNP--SILGT 118
+ERRRLAELR++H EITEKIN NIQ+LHS R +S KDSG + S + S+ +
Sbjct: 61 TERRRLAELRSEHGEITEKINVNIQILHSVRPTSRASSTKDSGPEETSLSGAAVNSLSAS 120
Query: 119 VQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAG 178
+Q++ F+ + P MDVDV+ PFA++DEI ++SPAAE GLQLGDQVLKFG VE G
Sbjct: 121 MQTSGFSVT---SGP--MDVDVVTSIPFAMVDEINESSPAAEGGLQLGDQVLKFGNVEGG 175
Query: 179 DNLLERLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCHFRML 230
DNLL+RLAAE + NQG AV V +MRQG + L+VTPR WQGRGLLGCHFR++
Sbjct: 176 DNLLQRLAAEAQSNQGQAVSVQVMRQGAKVVLSVTPRIWQGRGLLGCHFRLV 227
>UNIPROTKB|Q3SZ19 [details] [associations]
symbol:PSMD9 "26S proteasome non-ATPase regulatory subunit
9" species:9913 "Bos taurus" [GO:0070682 "proteasome regulatory
particle assembly" evidence=ISS] InterPro:IPR001478 Pfam:PF13180
PROSITE:PS50106 SMART:SM00228 SUPFAM:SSF50156 eggNOG:COG0265
GO:GO:0070682 KO:K06693 EMBL:BC103247 IPI:IPI00696188
RefSeq:NP_001029613.1 UniGene:Bt.48971 ProteinModelPortal:Q3SZ19
STRING:Q3SZ19 PRIDE:Q3SZ19 Ensembl:ENSBTAT00000029638 GeneID:513315
KEGG:bta:513315 CTD:5715 GeneTree:ENSGT00390000004147
HOGENOM:HOG000216665 HOVERGEN:HBG001851 InParanoid:Q3SZ19
OMA:LLGCNIV OrthoDB:EOG4BVRVR NextBio:20870809 ArrayExpress:Q3SZ19
Uniprot:Q3SZ19
Length = 221
Score = 164 (62.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 34/129 (26%), Positives = 70/129 (54%)
Query: 8 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLA 67
+++ L+ ++ +EA + A + L G G++ LVD EG+PR D+D++ VR+ R +
Sbjct: 21 SDVQELIRRKEEIEAQIKANYEVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIV 80
Query: 68 ELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNA 127
L+NDHK + +++ + + LH+ ++ + S +Q+ L Q+ + N+
Sbjct: 81 CLQNDHKAVMKQVEDALHQLHARDKEKQARDLAEAHREALSRDQSQG-LSPAQAFAKVNS 139
Query: 128 VPRNSPAAM 136
+ SPA++
Sbjct: 140 ISPGSPASI 148
Score = 147 (56.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 29/82 (35%), Positives = 51/82 (62%)
Query: 146 FAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGD-NLLERLAAEGRKNQGNAVPVVIMRQ 204
FA ++ I+ SPA+ GLQ+ D++L+FG+V + L+ + + + ++G + V +MR+
Sbjct: 134 FAKVNSISPGSPASIAGLQVDDEILEFGSVNTQNFQSLQNIGSVVQHSEGKPLNVTVMRR 193
Query: 205 GGLINLAVTPRPWQGRGLLGCH 226
G L + P W G+GLLGC+
Sbjct: 194 GEKHQLRLVPTRWAGKGLLGCN 215
>UNIPROTKB|O00233 [details] [associations]
symbol:PSMD9 "26S proteasome non-ATPase regulatory subunit
9" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=NAS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0070682 "proteasome regulatory
particle assembly" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046676 "negative regulation of insulin secretion"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0032024
"positive regulation of insulin secretion" evidence=ISS]
[GO:0043425 "bHLH transcription factor binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR001478 Pfam:PF13180
PROSITE:PS50106 SMART:SM00228 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0044281 GO:GO:0000082
EMBL:CH471054 GO:GO:0032024 GO:GO:0046676 GO:GO:0003713
GO:GO:0051436 SUPFAM:SSF50156 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG0265 GO:GO:0043425 EMBL:AC069503
GO:GO:0070682 KO:K06693 GO:GO:0005838 CTD:5715 HOGENOM:HOG000216665
HOVERGEN:HBG001851 OMA:LLGCNIV OrthoDB:EOG4BVRVR EMBL:AB003177
EMBL:AK315389 EMBL:CB111716 EMBL:BC002383 EMBL:BC004184
EMBL:BC004213 IPI:IPI00010860 IPI:IPI00216220 RefSeq:NP_001248329.1
RefSeq:NP_002804.2 UniGene:Hs.131151 ProteinModelPortal:O00233
SMR:O00233 IntAct:O00233 MINT:MINT-1435362 STRING:O00233
PhosphoSite:O00233 OGP:O00233 PaxDb:O00233 PRIDE:O00233 DNASU:5715
Ensembl:ENST00000537407 Ensembl:ENST00000541212
Ensembl:ENST00000542602 GeneID:5715 KEGG:hsa:5715 UCSC:uc001ubl.3
GeneCards:GC12P122326 HGNC:HGNC:9567 MIM:603146 neXtProt:NX_O00233
PharmGKB:PA33913 InParanoid:O00233 PhylomeDB:O00233 GenomeRNAi:5715
NextBio:22202 ArrayExpress:O00233 Bgee:O00233 CleanEx:HS_PSMD9
Genevestigator:O00233 GermOnline:ENSG00000110801 Uniprot:O00233
Length = 223
Score = 165 (63.1 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 8 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLA 67
+++ LM ++ +EA + A D L G G++ LVD EG+PR+D+D++ VR+ R +
Sbjct: 21 SDVQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNII 80
Query: 68 ELRNDHKEITEKINENIQLLHS 89
L+NDHK + +++ E + LH+
Sbjct: 81 CLQNDHKAVMKQVEEALHQLHA 102
Score = 142 (55.0 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 144 RPFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGD-NLLERLAAEGRKNQGNAVPVVIM 202
R FA ++ I+ SPA+ GLQ+ D++++FG+V + L + + + ++G + V ++
Sbjct: 134 RAFAKVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLHNIGSVVQHSEGKPLNVTVI 193
Query: 203 RQGGLINLAVTPRPWQGRGLLGCH 226
R+G L + P W G+GLLGC+
Sbjct: 194 RRGEKHQLRLVPTRWAGKGLLGCN 217
>GENEDB_PFALCIPARUM|PFC0785c [details] [associations]
symbol:PFC0785c "proteasome regulatory protein,
putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR001478 GO:GO:0006511 SUPFAM:SSF50156 EMBL:AL844502
KO:K06693 GO:GO:0005838 PIR:T18496 RefSeq:XP_001351248.1
ProteinModelPortal:O77379 PRIDE:O77379
EnsemblProtists:PFC0785c:mRNA GeneID:814492 KEGG:pfa:PFC0785c
EuPathDB:PlasmoDB:PF3D7_0317800 HOGENOM:HOG000283207 OMA:TRARIIH
ProtClustDB:CLSZ2432649 Uniprot:O77379
Length = 225
Score = 167 (63.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 36/91 (39%), Positives = 57/91 (62%)
Query: 5 NLKAEIMSLMEKRSALEADMNAIIDRLS--QSNGPGLSGNLVDSEGFPRTDIDIHLVRSE 62
NL+ E L++KR +E ++ +D L ++ G+ GNL+DSEGFPR DIDI+ +R
Sbjct: 2 NLE-EFNELVKKREDIENELKEHMDFLERPENKNVGMKGNLIDSEGFPRNDIDIYSIRVA 60
Query: 63 RRRLAELRNDHKEITEKINENIQLLHSARLV 93
R ++ L+ND+ +I +K+ E I +HS V
Sbjct: 61 RNKIICLKNDYIDINKKLEEYIHKVHSTHPV 91
Score = 98 (39.6 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 28/111 (25%), Positives = 50/111 (45%)
Query: 129 PRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV-EAGDNLLE---- 183
P+ D+ + FA+IDE+ + SP+ + GL++ DQ+ +FG + + +N E
Sbjct: 108 PQQITKEEDIKNAKKNVFAIIDEVIENSPSHKSGLKINDQIFQFGNIIKTNENKKENEHN 167
Query: 184 --------RLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCH 226
+ A+ K Q + V I+R+ + + P LGCH
Sbjct: 168 HPLNVELIKDIAKYMKTQPKQIVVKILREENIFFFHIIPEQTHNGLYLGCH 218
>UNIPROTKB|O77379 [details] [associations]
symbol:PFC0785c "Proteasome regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR001478
GO:GO:0006511 SUPFAM:SSF50156 EMBL:AL844502 KO:K06693 GO:GO:0005838
PIR:T18496 RefSeq:XP_001351248.1 ProteinModelPortal:O77379
PRIDE:O77379 EnsemblProtists:PFC0785c:mRNA GeneID:814492
KEGG:pfa:PFC0785c EuPathDB:PlasmoDB:PF3D7_0317800
HOGENOM:HOG000283207 OMA:TRARIIH ProtClustDB:CLSZ2432649
Uniprot:O77379
Length = 225
Score = 167 (63.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 36/91 (39%), Positives = 57/91 (62%)
Query: 5 NLKAEIMSLMEKRSALEADMNAIIDRLS--QSNGPGLSGNLVDSEGFPRTDIDIHLVRSE 62
NL+ E L++KR +E ++ +D L ++ G+ GNL+DSEGFPR DIDI+ +R
Sbjct: 2 NLE-EFNELVKKREDIENELKEHMDFLERPENKNVGMKGNLIDSEGFPRNDIDIYSIRVA 60
Query: 63 RRRLAELRNDHKEITEKINENIQLLHSARLV 93
R ++ L+ND+ +I +K+ E I +HS V
Sbjct: 61 RNKIICLKNDYIDINKKLEEYIHKVHSTHPV 91
Score = 98 (39.6 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 28/111 (25%), Positives = 50/111 (45%)
Query: 129 PRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV-EAGDNLLE---- 183
P+ D+ + FA+IDE+ + SP+ + GL++ DQ+ +FG + + +N E
Sbjct: 108 PQQITKEEDIKNAKKNVFAIIDEVIENSPSHKSGLKINDQIFQFGNIIKTNENKKENEHN 167
Query: 184 --------RLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCH 226
+ A+ K Q + V I+R+ + + P LGCH
Sbjct: 168 HPLNVELIKDIAKYMKTQPKQIVVKILREENIFFFHIIPEQTHNGLYLGCH 218
>DICTYBASE|DDB_G0275753 [details] [associations]
symbol:psmD9 "26S proteasome non-ATPase regulatory
subunit 9" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
dictyBase:DDB_G0275753 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0006511 eggNOG:COG0265 KO:K06693 GO:GO:0005838
RefSeq:XP_643532.1 STRING:Q552Y8 EnsemblProtists:DDB0232989
GeneID:8620114 KEGG:ddi:DDB_G0275753 OMA:CIISMPA Uniprot:Q552Y8
Length = 262
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 14 MEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHL-VRSERRRLAELRND 72
+EK LE+ MN + + GL G+ DSEG+P +++ + V+ R R+A ++ND
Sbjct: 35 LEKE--LESLMNFL--KSGDGKTFGLKGSFTDSEGYPSPHLELIIEVKKARSRIAHIQND 90
Query: 73 HKEITEKINENIQLLHSARLVPVPTSAKDSGDD--GGSNNQNPSILGTVQSASFNNAVPR 130
+K++ + I +++ LH + +S+ S ++ SNN N + ++
Sbjct: 91 YKQVMKDIEFHLEKLHKSPTNKNQSSSTFSINNTTSTSNNNNNNNEDEMKIDKPLTVETE 150
Query: 131 NSPAAMDVDVI-IRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV-------EAGDNL- 181
P ++V+V + PF ID +++ SP+ + L+ GD + +FGTV + GDNL
Sbjct: 151 TKPKPIEVEVEKVGIPFVYIDLVSEGSPSDKANLKKGDLIFQFGTVGPFFEERQVGDNLN 210
Query: 182 ---LERLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGC 225
L+ +A R ++ A+ + + R +I+ ++ PR W G+GL+GC
Sbjct: 211 SNHLQSIATIVRNSENKAIQIKLSRGTSIISTSLIPRKWSGQGLIGC 257
>POMBASE|SPAC2H10.02c [details] [associations]
symbol:SPAC2H10.02c "26S proteasome regulatory particle
assembly protein (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IC] [GO:0070682 "proteasome regulatory particle
assembly" evidence=ISO] InterPro:IPR001478 PROSITE:PS50106
SMART:SM00228 PomBase:SPAC2H10.02c GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0043161 GenomeReviews:CU329670_GR
SUPFAM:SSF50156 eggNOG:COG0265 GO:GO:0070682 KO:K06693
HOGENOM:HOG000216665 PIR:T38583 RefSeq:NP_594924.1 STRING:O94393
EnsemblFungi:SPAC2H10.02c.1 GeneID:2543070 KEGG:spo:SPAC2H10.02c
OMA:FATRRES OrthoDB:EOG4ZCXF4 NextBio:20804098 Uniprot:O94393
Length = 213
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 65/228 (28%), Positives = 108/228 (47%)
Query: 14 MEKRSALEADMNAIIDRLSQSNGPGLSGN------LVDSEGFPRTDIDIHLVRSERRRLA 67
M++ L+ I +RL++ G L L+ +GFPR+DID+ +R+ R +
Sbjct: 1 MDEFKQLDLKKREIENRLNELEGVLLKERVTMDTPLLTEDGFPRSDIDVPSIRTARHEII 60
Query: 68 ELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNA 127
LRNDH+E+ ++I + ++ + S +K+S + N + +FN A
Sbjct: 61 TLRNDHRELEDQIKKVLEKVFSG-------FSKESL----AANDETKLAQEADPLNFNAA 109
Query: 128 VPRNSPAAMDVDVIIR-RPFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGDNLLERLA 186
+ ++ R +PF V+D + SPA E GL +GD+++ V + L L
Sbjct: 110 NYNMNDIISRSKILGRVKPFCVVDSVAVESPAQEAGLCIGDELVHVQNVTS----LSELP 165
Query: 187 AEGRKNQGNAVPVVIMR----QGG--LINLAVTPRPWQGRGLLGCHFR 228
N + V+++R G L+ L +TP WQG GLLGCH R
Sbjct: 166 TFISNNVNKTLDVLLIRGYSADGSTNLVELKLTPHKWQGPGLLGCHLR 213
>UNIPROTKB|Q10920 [details] [associations]
symbol:C44B7.1 "Probable 26S proteasome non-ATPase
regulatory subunit 9" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001478
PROSITE:PS50106 SMART:SM00228 SUPFAM:SSF50156 EMBL:FO080139
eggNOG:COG0265 GeneTree:ENSGT00390000004147 HOGENOM:HOG000216665
OMA:LLGCNIV PIR:T15289 ProteinModelPortal:Q10920 SMR:Q10920
IntAct:Q10920 MINT:MINT-211419 STRING:Q10920 PaxDb:Q10920
EnsemblMetazoa:C44B7.1.1 EnsemblMetazoa:C44B7.1.2 UCSC:C44B7.1.2
WormBase:C44B7.1 InParanoid:Q10920 NextBio:882643 Uniprot:Q10920
Length = 197
Score = 129 (50.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 23/83 (27%), Positives = 47/83 (56%)
Query: 145 PFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGD-NLLERLAAEGRKNQGNAVPVVIMR 203
PF I + + SPA G + D ++++G + G+ N ++ +A ++++ + V ++R
Sbjct: 106 PFVKISSVVELSPADIGGFRKDDLIIQYGNLHHGNFNDMQEVAQITKQSEDKIIRVTVIR 165
Query: 204 QGGLINLAVTPRPWQGRGLLGCH 226
+ + L + P+ W G GLLGC+
Sbjct: 166 ENRPVRLEICPKKWSGPGLLGCN 188
Score = 108 (43.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 13 LMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRND 72
L+++R L+ + ++ L ++N + L+D+EG+P ID++ VR R L LRND
Sbjct: 10 LLQQRDELDGKIKELMLVL-ETNNSTMDSPLLDAEGYPLNTIDVYAVRHARHDLICLRND 68
Query: 73 HKEITEKI 80
+TEKI
Sbjct: 69 RAALTEKI 76
>FB|FBgn0038166 [details] [associations]
symbol:CG9588 species:7227 "Drosophila melanogaster"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] InterPro:IPR001478 Pfam:PF13180
SMART:SM00228 EMBL:AE014297 GO:GO:0006974 SUPFAM:SSF50156
eggNOG:COG0265 KO:K06693 GeneTree:ENSGT00390000004147 OMA:LLGCNIV
EMBL:AY071064 RefSeq:NP_650301.1 UniGene:Dm.20184 SMR:Q9VFS8
IntAct:Q9VFS8 MINT:MINT-827040 STRING:Q9VFS8
EnsemblMetazoa:FBtr0082849 GeneID:41672 KEGG:dme:Dmel_CG9588
UCSC:CG9588-RA FlyBase:FBgn0038166 InParanoid:Q9VFS8
OrthoDB:EOG43FFCV GenomeRNAi:41672 NextBio:824966 Uniprot:Q9VFS8
Length = 220
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 47/137 (34%), Positives = 68/137 (49%)
Query: 3 GTNLKAEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSE 62
GT K + L+ + LEA +N L+ ++ G+SG LVD+EGFPR DID++ VR
Sbjct: 4 GTTTKERLERLINAKKQLEAQINRNGQILAANDNVGMSGPLVDAEGFPRNDIDVYQVRLA 63
Query: 63 RRRLAELRNDHKEITEKINENIQLLHSARLVPVP-----TSAKDSGDDGGSNNQNPSILG 117
R+ + L+NDHKE+ +I + HS P SA D D N + L
Sbjct: 64 RQTIICLQNDHKELMNQIQTLLNQYHSEIATTDPELVNRASALDLDSDRSPGGANITDLA 123
Query: 118 TVQSASFNNAVPRNSPA 134
++ N V +SPA
Sbjct: 124 PARAIVVVNLVSPDSPA 140
Score = 140 (54.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 34/99 (34%), Positives = 53/99 (53%)
Query: 132 SPAAMDV-DVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGDNLLERLAAEG- 189
SP ++ D+ R V++ ++ SPA GL GD +L+FG++ +G N LA G
Sbjct: 113 SPGGANITDLAPARAIVVVNLVSPDSPAERAGLCAGDAILRFGSINSG-NFKGDLAQIGE 171
Query: 190 --RKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCH 226
R Q V + + R ++L + P+ W GRGLLGC+
Sbjct: 172 LVRNMQSQNVQLKVKRGEQQLDLILVPKTWSGRGLLGCN 210
>CGD|CAL0000640 [details] [associations]
symbol:orf19.2301 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA]
InterPro:IPR001478 Pfam:PF13180 SMART:SM00228 CGD:CAL0000640
SUPFAM:SSF50156 EMBL:AACQ01000114 EMBL:AACQ01000113 eggNOG:COG0265
KO:K06693 HOGENOM:HOG000216665 EMBL:AACQ01000358 RefSeq:XP_710041.1
RefSeq:XP_713906.1 RefSeq:XP_713964.1 ProteinModelPortal:Q59WK1
STRING:Q59WK1 GeneID:3644350 GeneID:3644409 GeneID:3648356
KEGG:cal:CaO19.1014 KEGG:cal:CaO19.2301 KEGG:cal:CaO19.9837
Uniprot:Q59WK1
Length = 231
Score = 122 (48.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 145 PFAVIDEITDASPAAEDGLQLGDQVLKFGTV--EAGDNLLERLAAEGRKNQGNAVPVVIM 202
PFA + E+ PA GL+ GDQ++ F A +N L L + R Q + V +
Sbjct: 143 PFAQVREVVSGGPAFNSGLKEGDQIIVFDDDIHAANNNKLGSLVSRVRSKQNEEIKVDLK 202
Query: 203 RQGGLINLAVTPRP-WQGRGLLGC 225
R I L + P W G+GLLGC
Sbjct: 203 RGEERITLKLIPSDNWDGQGLLGC 226
Score = 104 (41.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 11 MSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELR 70
+ L + +E +N + D L + LV +GFPR+D+D+ +R R R+ LR
Sbjct: 40 IQLSHVKDEIENQLNILFDLLRHKYNADMDTPLVTPDGFPRSDLDVVTIRLLRIRIIRLR 99
Query: 71 NDHKEITEKINENI 84
ND +++ +++ +
Sbjct: 100 NDDRKVIHLLDDRM 113
>UNIPROTKB|Q59WK1 [details] [associations]
symbol:CaO19.1014 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001478 Pfam:PF13180
SMART:SM00228 CGD:CAL0000640 SUPFAM:SSF50156 EMBL:AACQ01000114
EMBL:AACQ01000113 eggNOG:COG0265 KO:K06693 HOGENOM:HOG000216665
EMBL:AACQ01000358 RefSeq:XP_710041.1 RefSeq:XP_713906.1
RefSeq:XP_713964.1 ProteinModelPortal:Q59WK1 STRING:Q59WK1
GeneID:3644350 GeneID:3644409 GeneID:3648356 KEGG:cal:CaO19.1014
KEGG:cal:CaO19.2301 KEGG:cal:CaO19.9837 Uniprot:Q59WK1
Length = 231
Score = 122 (48.0 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 145 PFAVIDEITDASPAAEDGLQLGDQVLKFGTV--EAGDNLLERLAAEGRKNQGNAVPVVIM 202
PFA + E+ PA GL+ GDQ++ F A +N L L + R Q + V +
Sbjct: 143 PFAQVREVVSGGPAFNSGLKEGDQIIVFDDDIHAANNNKLGSLVSRVRSKQNEEIKVDLK 202
Query: 203 RQGGLINLAVTPRP-WQGRGLLGC 225
R I L + P W G+GLLGC
Sbjct: 203 RGEERITLKLIPSDNWDGQGLLGC 226
Score = 104 (41.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 11 MSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELR 70
+ L + +E +N + D L + LV +GFPR+D+D+ +R R R+ LR
Sbjct: 40 IQLSHVKDEIENQLNILFDLLRHKYNADMDTPLVTPDGFPRSDLDVVTIRLLRIRIIRLR 99
Query: 71 NDHKEITEKINENI 84
ND +++ +++ +
Sbjct: 100 NDDRKVIHLLDDRM 113
>MGI|MGI:1914401 [details] [associations]
symbol:Psmd9 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 9" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0032024 "positive regulation
of insulin secretion" evidence=ISO;ISS] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046676
"negative regulation of insulin secretion" evidence=ISO;ISS]
[GO:0070682 "proteasome regulatory particle assembly" evidence=ISO]
InterPro:IPR001478 Pfam:PF13180 PROSITE:PS50106 SMART:SM00228
MGI:MGI:1914401 GO:GO:0005634 GO:GO:0045893 GO:GO:0032024
GO:GO:0046676 GO:GO:0003713 SUPFAM:SSF50156 eggNOG:COG0265
GO:GO:0043425 GO:GO:0070682 KO:K06693 CTD:5715
GeneTree:ENSGT00390000004147 HOGENOM:HOG000216665
HOVERGEN:HBG001851 OMA:LLGCNIV OrthoDB:EOG4BVRVR EMBL:AK002280
EMBL:AK010276 EMBL:AK168863 EMBL:BC051930 EMBL:BC060245
IPI:IPI00113287 RefSeq:NP_080276.2 UniGene:Mm.278997
ProteinModelPortal:Q9CR00 SMR:Q9CR00 STRING:Q9CR00
PhosphoSite:Q9CR00 REPRODUCTION-2DPAGE:Q9CR00 PaxDb:Q9CR00
PRIDE:Q9CR00 Ensembl:ENSMUST00000100729 GeneID:67151 KEGG:mmu:67151
UCSC:uc008znk.1 NextBio:323734 Bgee:Q9CR00 Genevestigator:Q9CR00
GermOnline:ENSMUSG00000029440 Uniprot:Q9CR00
Length = 222
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 55/212 (25%), Positives = 96/212 (45%)
Query: 8 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLA 67
++I LM ++ +EA++ A D L G G++ LVD EG+PR D+D++ VR+ R +
Sbjct: 21 SDIQDLMRRKEEIEAEIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80
Query: 68 ELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNN--QNPSILGTVQSASFN 125
L+NDHK + +++ E + LH+ ++ ++ + N +L Q+ +
Sbjct: 81 CLQNDHKALMKQVEEALHQLHARDKEKQARDMAEAREEAMNRRLASNSPVLP--QAFARV 138
Query: 126 NAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV---EAGDNLL 182
N++ SPA++ V DEI + Q V GTV G L
Sbjct: 139 NSISPGSPASI-------AGLQVDDEIVEFGSVNTQNFQ---SVQNVGTVVQHSEGKPLN 188
Query: 183 ERLAAEGRKNQGNAVPVVIMRQGGLINLAVTP 214
+ G K+Q +P +G L+ + P
Sbjct: 189 VTVIRRGEKHQLRLIPTRWAGKG-LLGCNIIP 219
Score = 138 (53.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 30/112 (26%), Positives = 61/112 (54%)
Query: 116 LGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV 175
+ + + N + NSP ++ + FA ++ I+ SPA+ GLQ+ D++++FG+V
Sbjct: 112 MAEAREEAMNRRLASNSP-------VLPQAFARVNSISPGSPASIAGLQVDDEIVEFGSV 164
Query: 176 EAGD-NLLERLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCH 226
+ ++ + + ++G + V ++R+G L + P W G+GLLGC+
Sbjct: 165 NTQNFQSVQNVGTVVQHSEGKPLNVTVIRRGEKHQLRLIPTRWAGKGLLGCN 216
>RGD|621110 [details] [associations]
symbol:Psmd9 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 9" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0032024
"positive regulation of insulin secretion" evidence=IDA]
[GO:0043425 "bHLH transcription factor binding" evidence=IDA;IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046676
"negative regulation of insulin secretion" evidence=IMP]
[GO:0070682 "proteasome regulatory particle assembly"
evidence=ISO;ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] InterPro:IPR001478 Pfam:PF13180
PROSITE:PS50106 SMART:SM00228 RGD:621110 GO:GO:0005634
GO:GO:0006915 GO:GO:0045944 GO:GO:0032024 GO:GO:0046676
GO:GO:0003713 SUPFAM:SSF50156 eggNOG:COG0265 GO:GO:0043425
GO:GO:0070682 KO:K06693 CTD:5715 HOGENOM:HOG000216665
HOVERGEN:HBG001851 EMBL:AF067728 IPI:IPI00231038 RefSeq:NP_569114.1
UniGene:Rn.24127 ProteinModelPortal:Q9WTV5 MINT:MINT-1894545
STRING:Q9WTV5 PhosphoSite:Q9WTV5 PRIDE:Q9WTV5 GeneID:161475
KEGG:rno:161475 UCSC:RGD:621110 NextBio:620975 ArrayExpress:Q9WTV5
Genevestigator:Q9WTV5 GermOnline:ENSRNOG00000001339 Uniprot:Q9WTV5
Length = 222
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 8 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLA 67
++I LM ++ +EA + A D L G G++ LVD EG+PR D+D++ VR+ R +
Sbjct: 21 SDIQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNII 80
Query: 68 ELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGD--DGGSNNQNPSILGTVQSASFN 125
L+NDHK + +++ E + LH AR A+D + + N + S + A
Sbjct: 81 CLQNDHKALMKQVEEALHQLH-AR--DKEKQARDMAEAREEAMNRRLASDSPALPKAFAR 137
Query: 126 -NAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV---EAGDNL 181
N++ SPA++ V DEI + Q V GTV G L
Sbjct: 138 VNSISPGSPASI-------AGLQVDDEIVEFGSVNTQNFQSLQNV---GTVVQHSEGKPL 187
Query: 182 LERLAAEGRKNQGNAVPVVIMRQGGLINLAVTP 214
+ G K+Q P +G L+ +TP
Sbjct: 188 NVMVIRRGEKHQLRLTPTRWAGKG-LLGCNITP 219
Score = 146 (56.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 33/116 (28%), Positives = 64/116 (55%)
Query: 116 LGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDASPAAEDGLQLGDQVLKFGTV 175
+ + + N + +SPA + + FA ++ I+ SPA+ GLQ+ D++++FG+V
Sbjct: 112 MAEAREEAMNRRLASDSPA-------LPKAFARVNSISPGSPASIAGLQVDDEIVEFGSV 164
Query: 176 EAGD-NLLERLAAEGRKNQGNAVPVVIMRQGGLINLAVTPRPWQGRGLLGCHFRML 230
+ L+ + + ++G + V+++R+G L +TP W G+GLLGC+ L
Sbjct: 165 NTQNFQSLQNVGTVVQHSEGKPLNVMVIRRGEKHQLRLTPTRWAGKGLLGCNITPL 220
>SGD|S000001269 [details] [associations]
symbol:NAS2 "Proteasome-interacting protein" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IGI;IDA;IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] Pfam:PF00595 InterPro:IPR001478
PROSITE:PS50106 SMART:SM00228 SGD:S000001269 GO:GO:0005829
GO:GO:0005634 EMBL:BK006942 GO:GO:0006511 SUPFAM:SSF50156 KO:K06867
EMBL:Z38113 eggNOG:COG0265 GO:GO:0070682 RefSeq:NP_012259.3
GeneID:854810 KEGG:sce:YIL007C KO:K06693
GeneTree:ENSGT00390000004147 HOGENOM:HOG000216665 OMA:LLGCNIV
OrthoDB:EOG4ZCXF4 EMBL:AY558294 PIR:S48450 RefSeq:NP_012265.3
ProteinModelPortal:P40555 SMR:P40555 DIP:DIP-1893N IntAct:P40555
MINT:MINT-394729 STRING:P40555 PaxDb:P40555 EnsemblFungi:YIL007C
GeneID:854816 KEGG:sce:YIL001W CYGD:YIL007c NextBio:977636
Genevestigator:P40555 GermOnline:YIL007C Uniprot:P40555
Length = 220
Score = 157 (60.3 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 30/88 (34%), Positives = 54/88 (61%)
Query: 145 PFAVIDEITDASPAAEDGLQLGDQVLKFGTVEAGDNL-LERLAAEGRKNQGNAVPVVIMR 203
PFA I E+ SP+ + +++ D+++ G V A ++ L+ + KN+ +PV+++R
Sbjct: 133 PFAFISEVVPGSPSDKADIKVDDKLISIGNVHAANHSKLQNIQMVVMKNEDRPLPVLLLR 192
Query: 204 QGGLINLAVTP-RPWQGRGLLGCHFRML 230
+G ++ ++TP R W GRGLLGC + L
Sbjct: 193 EGQILKTSLTPSRNWNGRGLLGCRIQEL 220
Score = 108 (43.1 bits), Expect = 0.00048, P = 0.00048
Identities = 34/132 (25%), Positives = 57/132 (43%)
Query: 9 EIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAE 68
++ LM ++ +E + A L Q G G+ LV +G+PR+D+D+ V R+ +
Sbjct: 30 KLSELMVLKTDIETQLEAYFSVLEQQ-GIGMDSALVTPDGYPRSDVDVLQVTMIRKNVNM 88
Query: 69 LRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAV 128
L+ND +N +Q H S D NN + +I T+ A + V
Sbjct: 89 LKND-------LNHLLQRSHVLLNQHFDNMNVKSNQDARRNNDDQAIQYTIPFAFISEVV 141
Query: 129 PRNSPAAMDVDV 140
P + D+ V
Sbjct: 142 PGSPSDKADIKV 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 230 230 0.00083 113 3 11 22 0.45 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 564 (60 KB)
Total size of DFA: 146 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.85u 0.09s 23.94t Elapsed: 00:00:01
Total cpu time: 23.85u 0.09s 23.94t Elapsed: 00:00:01
Start: Mon May 20 19:18:19 2013 End: Mon May 20 19:18:20 2013