BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026992
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 29/232 (12%)
Query: 1 MGDSDDGSFSVSSLMCQEDESCLSQESGDEKSCDGSYYCDPCCFVLGNGDEEFIEKLVDK 60
MG+ D S++ +C E ES L+++ D+++ + S +P F DE+++ LV K
Sbjct: 1 MGEPKD---SLALFLCHESESSLNED--DDETIERSDKQEPH-FTTTIDDEDYVADLVLK 54
Query: 61 ET----DFGSKGCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLD 116
E SK SD RL AI+WI R FGFQ +TAY+++ + D
Sbjct: 55 ENLRFETLPSKTTSSSD-------------RLIAIDWILTTRTRFGFQHQTAYIAISYFD 101
Query: 117 RFLSKRSI--DDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVD-DFDFENKVIQRME 173
FL KR I + WA+RLLSVACLSLAAKMEE VP LS++ D DF F+ VI++ E
Sbjct: 102 LFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTE 161
Query: 174 LLVLSTLDWKMGSITPFAFLHYFMIKLCGECR--PKELV-SRAVELIMTITK 222
LL+LSTLDWKM ITPF + +YF+ K+ + K+LV R+ + ++ +TK
Sbjct: 162 LLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTK 213
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 16/183 (8%)
Query: 51 EEFIEKLVDKE------TDFGSKGCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQ 104
EE + LV++E D+G + G D R +S +AI WI+ + F
Sbjct: 75 EECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRS-------EAIGWIWEVYTYYNFS 127
Query: 105 FRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--F 162
TAYL+V++LDRFLS+ + +G+ W +LLSVACLS+AAKMEE VP + Q+ + F
Sbjct: 128 SVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRF 187
Query: 163 DFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL-CGECRPKELVSRAVELIMTIT 221
FE + I RMELLVL+ L+W+M ++TPF+++ YF+ KL G P+ + R+ ELI+ I
Sbjct: 188 LFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRSWLLRSSELILRIA 247
Query: 222 KGN 224
G
Sbjct: 248 AGT 250
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 133 bits (335), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 126/245 (51%), Gaps = 39/245 (15%)
Query: 9 FSVSSLMCQEDESCL------------SQESGDEKSCDGSYYCDPCCFVLGN----GDEE 52
+ S L+C ED S + +G C G PC V G EE
Sbjct: 9 MAASILLCAEDSSSVLGFGGEEEEEEEDVVAGKRARCAGPP-PPPCVDVAGVDFAVPSEE 67
Query: 53 FIEKLVDKETDFGSK--------GCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQ 104
+ +LV+ E D + G D R R+DAI+WI+ + + F
Sbjct: 68 CVARLVETEADHMPREDYAERLRAGGGDGDLDLRV-------RMDAIDWIWKVHSYYSFA 120
Query: 105 FRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--F 162
TA L+V++LDRFLS + DGK W +LL+VACLSLAAKMEE VP + QV + +
Sbjct: 121 PLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERY 180
Query: 163 DFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRP---KELVSRAVELIMT 219
FE K IQRMELLVLSTL W+M ++TPF+++ YF+ +L G P L+S ELI+
Sbjct: 181 VFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRSALLSS--ELILC 238
Query: 220 ITKGN 224
I +G
Sbjct: 239 IARGT 243
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 78 RTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSV 137
+T+S AR D++ WI +A + FQ TAYL+V+++DRFL R + + W ++LL+V
Sbjct: 73 QTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAV 132
Query: 138 ACLSLAAKMEECQVPALSEFQVD--DFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHY 195
ACLSLAAKMEE VP+L +FQV + FE K I+RMELLVLS LDW++ S+TPF F+ +
Sbjct: 133 ACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISF 192
Query: 196 FMIKL-CGECRPKELVSRAVELIMTITK 222
F K+ +S A E+I++ K
Sbjct: 193 FAYKIDPSGTFLGFFISHATEIILSNIK 220
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 127 bits (319), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 82 WLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSID-DGKLWAIRLLSVACL 140
W + ARL A++WI R FGF RTAYL++ + DRF +R +D + WA RLLS+AC+
Sbjct: 95 WFRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACV 154
Query: 141 SLAAKMEECQVPALSEFQVDDFD-FENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIK 199
S+AAKMEE Q PALSEF F + I+RMELLVLSTL W+MG++TPF FL F +
Sbjct: 155 SVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSR 214
Query: 200 L 200
L
Sbjct: 215 L 215
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 120/206 (58%), Gaps = 20/206 (9%)
Query: 2 GDSDDGSFSVSSLMCQEDE-SCLSQESGDEKSCDGSYYCDPCCFVLGNGDEEF-----IE 55
D DD S+ L+C ED + + + D +C D CC V G EE I
Sbjct: 3 ADDDDASY----LLCAEDAGAAVFDVAVDISTCTTED--DECCSV---GGEELYSAASIA 53
Query: 56 KLVDKETDFGSKGCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFL 115
+L+ E ++ + + D R++S AR +++ WI + GF TAYL+V+++
Sbjct: 54 ELIGGEAEYSPRS-DYPD--RLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYM 110
Query: 116 DRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVD--DFDFENKVIQRME 173
DRFLS R + +G+ WA++LL+VACLSLAAKMEE VP+L + QV+ + FE + I RME
Sbjct: 111 DRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRME 170
Query: 174 LLVLSTLDWKMGSITPFAFLHYFMIK 199
L+L+ L+W++ S+TPF F+ +F K
Sbjct: 171 FLILTALNWRLRSVTPFTFIDFFACK 196
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 82 WLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLS 141
W+K AR + WI A F F +TAY++V +LDRFL++R +D K WA++LLSVACLS
Sbjct: 95 WMKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLS 154
Query: 142 LAAKMEECQVPALSEFQVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLC 201
LAAK+EE + P L EF++D +D + + RMELLVL+TL W+M + TPF++L+ F K
Sbjct: 155 LAAKVEERRPPRLPEFKLDMYDCAS--LMRMELLVLTTLKWQMITETPFSYLNCFTAKFR 212
Query: 202 GECRPKELVSRAVELIMTITK 222
+ R K +V RA+E I K
Sbjct: 213 HDER-KAIVLRAIECIFASIK 232
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 89 DAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEE 148
+++ WI R++ GFQ TAYL+V ++DRF+S RS+ D WA +LL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPDHG-WASQLLCVACLSLAAKMEE 185
Query: 149 CQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRP 206
P L + Q++ F FE + IQRMEL+VL LDW++ S+TPFAF+ +F K+ R
Sbjct: 186 SSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGRS 245
Query: 207 KELVS-RAVELIMT 219
+++ RA ++I++
Sbjct: 246 SRILALRACQIILS 259
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 12/180 (6%)
Query: 51 EEFIEKLVDKETDFGSKGCGFSDDCSTRTQSW---LKCARLDAIEWIFNKRAMFGFQFRT 107
EE I ++V+KE K SDD R +S L R DA+ WI+ + F
Sbjct: 44 EEIIMEMVEKE-----KQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLC 98
Query: 108 AYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFE 165
L++++LDRFLS + GK W ++LL+VACLSLAAK+EE +VP L + QV D F FE
Sbjct: 99 FCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFE 158
Query: 166 NKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL--CGECRPKELVSRAVELIMTITKG 223
K +QRMELLVL+ L W++ +ITP +++ YF+ K+ C + L+SR++++I + TKG
Sbjct: 159 AKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKG 218
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 80/117 (68%), Gaps = 5/117 (4%)
Query: 82 WLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKL-WAIRLLSVACL 140
W AR ++WI R FGF RTAYL++ + DRF +R ID + WA RLL+VAC+
Sbjct: 104 WFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACV 163
Query: 141 SLAAKMEECQVPALSEFQV----DDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL 193
SLAAKMEE + PALSEF+ D ++F I+RMELLVLSTLDW+M ++TPF +L
Sbjct: 164 SLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYL 220
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Query: 85 CARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAA 144
AR D++ WI R ++G TAYL+V ++DRFLS + G WA++LL+V CLSLAA
Sbjct: 114 AARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLP-GNGWAMQLLAVTCLSLAA 172
Query: 145 KMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCG 202
KMEE VP++ + Q++D + FE++ I RMELLVL LDW++ SITPF F++ F K+
Sbjct: 173 KMEETLVPSILDLQMEDARYIFEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDP 232
Query: 203 ECRP-KELVSRAVELIMT 219
+ +EL+ +A ++ +
Sbjct: 233 NGKHIRELIHQATQVTLA 250
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 115/204 (56%), Gaps = 18/204 (8%)
Query: 3 DSDDGSFSVSSLMCQEDESCLSQESGDEKSCDGSYYCDPCCFVLGNGD----EEFIEKLV 58
+ SF + +L C+E++ + G+E + S FV+ D +E + L
Sbjct: 11 EEQSNSFLLDALYCEEEKW---DDEGEEVEENSSLSSSSSPFVVLQQDLFWEDEDLVTLF 67
Query: 59 DKETDFGSKGCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRF 118
KE + +G DD +L R +A+ WI A +GF A L++ +LD+F
Sbjct: 68 SKEEE---QGLSCLDDV------YLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKF 118
Query: 119 LSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLV 176
+ S+ K W ++L+SVACLSLAAK+EE QVP L +FQV++ + FE K IQRMELL+
Sbjct: 119 ICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLI 178
Query: 177 LSTLDWKMGSITPFAFLHYFMIKL 200
LSTL+WKM ITP +F+ + + +L
Sbjct: 179 LSTLEWKMHLITPISFVDHIIRRL 202
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Query: 82 WLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLS 141
+L R A++WIF ++ +GF TA L+V++ DRF++ R K W +L ++ACLS
Sbjct: 81 FLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLS 140
Query: 142 LAAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIK 199
LAAK+EE +VP L +FQV++ + FE K IQRMELLVLSTLDW+M +TP +F + + +
Sbjct: 141 LAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRR 200
Query: 200 LCGECRPK-ELVSRAVELIMTI 220
+ + E +SR L+++I
Sbjct: 201 YSFKSHHQLEFLSRCESLLLSI 222
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 86 ARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAK 145
R A++WI A + F LS+++LDRFL+ + K WA +LL+V+CLSLA+K
Sbjct: 96 VRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASK 155
Query: 146 MEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGE 203
MEE VP + + QV+D F FE K I+RMELLV++TL+W++ ++TPF+F+ YF+ K+ G
Sbjct: 156 MEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGH 215
Query: 204 CRPKELVSRAVELIMTITKG 223
+ L+ R+ I+ TK
Sbjct: 216 V-SENLIYRSSRFILNTTKA 234
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 51 EEFIEKLVDKETDFGSKGCGFSDDCSTRTQSWLK--CARLDAIEWIFNKRAMFGFQFRTA 108
EE + ++++KE + DD R ++ R+ A+ WI+ F
Sbjct: 36 EEIVREMIEKERQHSPR-----DDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCI 90
Query: 109 YLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFEN 166
L++++LDRFLS + GK W ++LL+VACLSLAAK+EE VP L + QV F FE
Sbjct: 91 CLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEA 150
Query: 167 KVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCG-ECRPK-ELVSRAVELIMTITKG 223
K +QRMELLVL+ L W++ ++TP +++ YF+ K+ G + P LV+R++++I + TKG
Sbjct: 151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKG 209
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 90/143 (62%), Gaps = 5/143 (3%)
Query: 87 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKR--SIDDGKLWAIRLLSVACLSLAA 144
R+ AI+WI +A + F AYL+V++LDRFLS S+ + W +LL VACLSLAA
Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAA 163
Query: 145 KMEECQVPALSEFQV--DDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLC- 201
KMEE P + QV ++ F+ + I RME++VL+TL W+M ++TPF ++ +F+ K+
Sbjct: 164 KMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINE 223
Query: 202 GECRPKELVSRAVELIMTITKGN 224
G EL+SR E+I++ K
Sbjct: 224 GNRITSELISRCTEIILSTMKAT 246
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 8/160 (5%)
Query: 51 EEFIEKLVDKETDFGSKGCGFSDDCSTRTQSWLKCA-RLDAIEWIFNKRAMFGFQFRTAY 109
+EF+ LV+KE D + G+ + L+C+ R DAI+WI + + F + Y
Sbjct: 62 DEFVALLVEKEMDHQPQR-GYLEKLEL---GGLECSWRKDAIDWICKVHSYYNFGPLSLY 117
Query: 110 LSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDD--FDFENK 167
L+V++LDRFLS ++ + W +LLSV+CLSLA KMEE VP + QV D + FE +
Sbjct: 118 LAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEAR 177
Query: 168 VIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPK 207
I+RMEL+V+ TL W++ ++TPF+F+ YF+ K E +P
Sbjct: 178 HIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKF-NEGKPP 216
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Query: 87 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKM 146
R +A++W+ ++ +GF TA L+V++ DRF++ + K W +L++VA LSLAAK+
Sbjct: 96 RKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKV 155
Query: 147 EECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
EE QVP L + QV++ + FE K IQRMELL+LSTL W+M +TP +F + +
Sbjct: 156 EEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHII 208
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 83 LKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSL 142
L R DAI+WI+ ++ F TA LSV++LDRFLS + + +LL+VA LSL
Sbjct: 86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSL 145
Query: 143 AAKMEECQVPALSEFQVDD--FDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKL 200
AAKMEE VP + QV D + FE + I+RMEL VL+ L W+M ++T +F+ Y++ K
Sbjct: 146 AAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWRMQAVTACSFIDYYLHKF 205
Query: 201 CGECRPK-ELVSRAVELIMTITK 222
+ P +SR+V+LI++ K
Sbjct: 206 NDDDTPSTSALSRSVDLILSTCK 228
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Query: 106 RTAYLSVDFLDRFLSKRSID-DGKLWAIRLLSVACLSLAAKMEECQVPALSEFQV-DDFD 163
R AYL+++++DR+LSKR + + WA RLL+++CL+LAAKM+ + ++ Q ++F
Sbjct: 77 RVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEFM 136
Query: 164 FENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELV----SRAVELIMT 219
F+ IQRME +VL+ L+W+ S+TP AFL +F+ + R L+ +RAV+L++
Sbjct: 137 FDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLR 196
Query: 220 I 220
+
Sbjct: 197 V 197
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 108 AYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDDFDFENK 167
YL+V++LDRFLS + K W ++L+S++C+SL+AKM + + ++S+ V+ F+ +
Sbjct: 78 TYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDM-SVSDLPVEGEFFDAQ 136
Query: 168 VIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
+I+RME ++L L W+M S+TPF+FL +F+
Sbjct: 137 MIERMENVILGALKWRMRSVTPFSFLAFFI 166
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 86 ARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDR-FLSKRSIDDGKLWAIRLLSVACLSLAA 144
AR A+ W A GF TA L+V +LDR FL + W RL +VAC++LAA
Sbjct: 77 AREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVALAA 136
Query: 145 KMEECQVPALSEFQV---------DDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHY 195
K+EE +VP L + Q+ + + FE+K ++RMELLVLS L W+M +TP ++L
Sbjct: 137 KVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYLQP 196
Query: 196 FM 197
+
Sbjct: 197 LL 198
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 97 KRAM--FGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPAL 154
K AM G + TA+ + ++LDRFLS + W + ++SV CLSLA K++E +P+L
Sbjct: 93 KAAMGRLGLEAATAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSL 152
Query: 155 SEFQVDD---FDFENKVIQRMELLVLSTLDWKMGSITPFAFL 193
+ Q+++ F I+ MEL +L L W++ +TPF+FL
Sbjct: 153 HDLQMEEAMGHSFRASTIRDMELTLLKALRWRLACVTPFSFL 194
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
I+W+ + +T YLSV ++DRFLS S+ GKL +L+ AC+ +AAK EE
Sbjct: 202 IDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKL---QLVGAACMLVAAKFEEIY 258
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKEL 209
P ++EF + D + K + RME L+L TL + + T FL ++ +P+
Sbjct: 259 PPEVAEFVYITDDTYTAKQVLRMEHLILKTLAFDLSVPTCRDFLSRYL--FAANAKPESQ 316
Query: 210 VSRAVELIMTITKGNC 225
+ E + +T NC
Sbjct: 317 LKYLAEYLSELTLINC 332
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T +L+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 204 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 260
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLH-YFMIKLCGECR 205
P ++EF + D + K + RME LVL L + + + T FL+ YF+ + C+
Sbjct: 261 PPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFLNQYFLHQQPANCK 317
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T +L+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 215 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 271
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL-HYFMIKLCGECR 205
P ++EF + D + K + RME LVL L + + + T FL YF+ + C+
Sbjct: 272 PPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLHQQPANCK 328
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 87 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKM 146
RL +EW+ + F T YL+V+ LDRFLS + + +L +L+ ++ L ++AK
Sbjct: 197 RLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKEL---QLVGLSALLMSAKY 253
Query: 147 EECQVPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECR 205
EE P + + + D + +K I ME +LSTL+W + T + FL F+ + +
Sbjct: 254 EEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEK 313
Query: 206 PKELVSRAVEL 216
+ +V EL
Sbjct: 314 MENMVHYLAEL 324
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T +L+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 213 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 269
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL-HYFMIKLCGECR 205
P ++EF + D + K + RME LVL L + + + T FL YF+ + C+
Sbjct: 270 PPEVAEFVYITDDTYTKKQVLRMEHLVLKVLAFDLAAPTINQFLTQYFLHQQPANCK 326
>sp|P47827|CCNA2_XENLA Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1
Length = 415
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T YL+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 197 VDWLVEVGEEYKLQNETLYLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 253
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLH-YFMI 198
P ++EF + D + K + +ME LVL L + + + T +L+ YF I
Sbjct: 254 PPEVAEFVYITDDTYTKKQVLKMEHLVLKVLSFDLAAPTILQYLNQYFQI 303
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T +L+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 205 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 261
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL-HYFMIKLCGECR 205
P ++EF + D + K + RME LVL L + + + T FL YF+ C+
Sbjct: 262 PPEVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFLTQYFLHLQPANCK 318
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + Q T +L+V+++DRFLS S+ GKL +L+ A + LA+K EE
Sbjct: 179 VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKL---QLVGTAAMLLASKFEEIY 235
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL-HYFM 197
P ++EF + D + K + RME L+L L + + + T FL YF+
Sbjct: 236 PPEVAEFVYITDDTYNKKQVLRMEHLILKVLSFDLAAPTINQFLTQYFL 284
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
I+W+ F T +L+V+ +DRFL K+ + KL +L+ V + LA K EE
Sbjct: 191 IDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKL---QLVGVTAMLLACKYEEVA 247
Query: 151 VPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
VP + + + D + I ME L+L+TL + M TP+ F+ F+
Sbjct: 248 VPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFL 295
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
I+W+ F T +L+V+ +DRFL K+ + KL +L+ V + LA K EE
Sbjct: 191 IDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKL---QLVGVTAMLLACKYEEVA 247
Query: 151 VPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
VP + + + D + I ME L+L+TL + M TP+ F+ F+
Sbjct: 248 VPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFL 295
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 51 EEFIEKLVDKETDFGSKGCGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYL 110
EE I ++KE F + G F + ++ L R A +W+ R+ + T +
Sbjct: 45 EEAIAMDLEKELCFNNHGDKFVEFFVSKK---LTDYRFHAFQWLIQTRSRLNLSYETVFS 101
Query: 111 SVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSEFQVDDFD--FENKV 168
+ + DRF+ D+ W + L++V LS+A+K E P L E +++ F
Sbjct: 102 AANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNT 161
Query: 169 IQRMELLVLSTLDWKMGSITPFAFLHYFMIKL 200
+ +MEL++L L+W++ ++T + F + K+
Sbjct: 162 VAQMELIILKALEWRVNAVTSYTFSQTLVSKI 193
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ F T +L+V+ +DRFL+K+++ KL +L+ + + LA K EE
Sbjct: 213 VDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKL---QLVGLVAMLLACKYEEVS 269
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
VP +S+ + D + K I ME L+L+TL + M T + F+ F+
Sbjct: 270 VPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFL 317
>sp|O93229|CCNB2_RANJA G2/mitotic-specific cyclin-B2 OS=Rana japonica GN=CCNB2 PE=2 SV=1
Length = 392
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + F F T Y+ + +DRFL + I GKL +L+ V L LA+K EE
Sbjct: 165 VDWLIQVNSRFQFLQETLYMGIAIMDRFLQVQPISRGKL---QLVGVTSLLLASKYEEMY 221
Query: 151 VPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL 193
P +++F + D + I+ ME+++L L + +G P FL
Sbjct: 222 SPEVADFAYITDNAYTTSQIREMEMIILRELKFDLGRPLPLHFL 265
>sp|P25012|CCNB2_SOYBN G2/mitotic-specific cyclin S13-7 (Fragment) OS=Glycine max PE=2
SV=1
Length = 257
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 87 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKM 146
R ++W+ + F T YL+++ +DRFL+ +++ +L +L+ ++ + +A+K
Sbjct: 30 RAILVDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRREL---QLVGISAMLMASKY 86
Query: 147 EECQVPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
EE P +++F + D + ++ I ME +L+ L+W + TPF FL F+
Sbjct: 87 EEIWPPEVNDFVCLSDRAYTHEQILAMEKTILNKLEWTLTVPTPFVFLVRFI 138
>sp|Q10Q63|CCF31_ORYSJ Putative cyclin-F3-1 OS=Oryza sativa subsp. japonica GN=CYCF3-1
PE=3 SV=1
Length = 389
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + +F Q T + +V ++DRFLSK + KL +LL L +A+K EE
Sbjct: 155 VDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKL---KLLGTTALFVASKYEEIH 211
Query: 151 VPALSEFQVDDFD-FENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCG 202
P + F + + + + +MEL +L L++ +GS T FL F+ CG
Sbjct: 212 PPHVRNFSAVTVNTYTTQQVSKMELDILRFLNFDVGSPTVITFLRKFLTSCCG 264
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ F T +L+V+ +DRFL+K+++ KL +L+ + + LA K EE
Sbjct: 107 VDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKL---QLVGLVAMLLACKYEEVS 163
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
VP +S+ + D + K I ME L+L+TL + M T + F+ F+
Sbjct: 164 VPVVSDLIHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFMRRFL 211
>sp|Q5SCB5|CCND_OSTTA Cyclin-D OS=Ostreococcus tauri GN=CycD PE=3 SV=1
Length = 374
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 84 KCA-RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSL 142
CA R +EWI + A F TA +++ + DR LSK + L L+++ CL +
Sbjct: 103 HCAFRSQLVEWILDVCAGERFGPTTADVAIAYTDRVLSKTVVPKTSL---HLVALCCLHI 159
Query: 143 AAKMEECQ--VPALSEFQVDDFD-FENKVIQRMELLVLSTLDWKMGSITPFAFLHYFMIK 199
A K EE + VP +S+ + + + ++I++MEL VL L W +G +TP FL F+
Sbjct: 160 AVKYEEIEERVPTMSKLRSWTSNMYSPEIIRKMELAVLIELGWDLGVLTPAHFLESFLAL 219
Query: 200 LCG 202
G
Sbjct: 220 TNG 222
>sp|P25011|CCNB1_SOYBN G2/mitotic-specific cyclin S13-6 OS=Glycine max PE=2 SV=1
Length = 454
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + F T YL+++ +DRFL+ +++ +L +L+ ++ + +A+K EE
Sbjct: 230 VDWLIDVHTKFELSLETLYLTINIIDRFLAVKTVPRREL---QLVGISAMLMASKYEEIW 286
Query: 151 VPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
P +++F + D + ++ I ME +L+ L+W + TP FL F+
Sbjct: 287 PPEVNDFVCLSDRAYTHEHILTMEKTILNKLEWTLTVPTPLVFLVRFI 334
>sp|P24861|CCNA_PATVU G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1
Length = 426
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + T +L+++++DRFLS+ S+ GKL +L+ A + +A+K EE
Sbjct: 208 VDWMVEVSEEYKLHRETLFLAINYIDRFLSQMSVLRGKL---QLVGAASMFIASKYEEIY 264
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSIT 188
P +SEF + D +E K + RME L+L L + + T
Sbjct: 265 PPEVSEFVYITDDTYEQKQVLRMEHLILKVLSFDVAQPT 303
>sp|Q75I54|CCA31_ORYSJ Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1
Length = 373
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + T YL+V ++DRFLS +SI+ KL +LL V+ + +A+K EE
Sbjct: 143 VDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKL---QLLGVSAMLIASKYEEIS 199
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
P + +F + D + + + +ME +L+ L ++MG+ T FL F+
Sbjct: 200 PPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFI 247
>sp|P47794|CCNE1_DANRE G1/S-specific cyclin-E1 OS=Danio rerio GN=ccne1 PE=2 SV=1
Length = 410
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 87 RLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKM 146
R ++W+ ++ T YL D+ DRF++ + ++ ++L+ ++CL +AAKM
Sbjct: 147 RAILLDWLMEVCEVYKLHRETFYLGQDYFDRFMATQ--ENVLKTTLQLIGISCLFIAAKM 204
Query: 147 EECQVPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
EE P + +F V D I ME++++ L+W + +TP A+L+ +M
Sbjct: 205 EEIYPPKVHQFAYVTDGACTEDDILSMEIIIMKELNWSLSPLTPVAWLNIYM 256
>sp|P34801|CCN2_ANTMA G2/mitotic-specific cyclin-2 OS=Antirrhinum majus PE=2 SV=1
Length = 441
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
I+W+ F T YL+++ +DR+L+ ++ +L +LL ++ + +A+K EE
Sbjct: 225 IDWLVQVHYKFELSPETLYLTINIVDRYLASKTTSRREL---QLLGMSSMLIASKYEEIW 281
Query: 151 VPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
P +++ + D + N+ + RME +L L+W + TP+ FL F+
Sbjct: 282 APEVNDLVCISDGSYSNEQVLRMEKKILGALEWYLTVPTPYVFLVRFI 329
>sp|Q60FX9|CCNB2_ANGJA G2/mitotic-specific cyclin-B2 OS=Anguilla japonica GN=ccnb2 PE=2
SV=1
Length = 394
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
++W+ + F T Y++V LDRFL + + KL +L+ V + +A+K EE
Sbjct: 166 VDWLIQVHSRFQLLQETLYMTVAILDRFLQVQPVSRRKL---QLVGVTAMLVASKYEEMY 222
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFL 193
P + +F + D F I+ ME+L+L L++++G P FL
Sbjct: 223 APEVGDFVYITDNAFTKAQIREMEMLILRDLNFQLGRPLPLHFL 266
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRF-LSKRSIDDGKLWAIRLLSVACLSLAAKMEEC 149
++W+ ++ T YL+ DF DRF L+++ I+ L +L+ + L +A+K+EE
Sbjct: 146 LDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDINKNML---QLIGITSLFIASKLEEI 202
Query: 150 QVPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
P L EF V D + I RMEL++L L W++ +T ++L+ F+
Sbjct: 203 YAPKLQEFAYVTDGACSEEDILRMELIILKALKWELCPVTIISWLNLFL 251
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 110 LSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQVPALSE---FQVDDFDFEN 166
L++++LDRFLS ++ K ++LL C+ LA+KM+E VP +E D+
Sbjct: 80 LAMNYLDRFLS---VEPTKKTRLQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSVRPG 135
Query: 167 KVIQRMELLVLSTLDWKMGSITPFAFLHYFMIKLCGECRPKELVSRAVELIMTI 220
+++Q MELL L+ L W + S+TP F+ +F+ KL K+++ + + + +
Sbjct: 136 ELLQ-MELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVAL 188
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 91 IEWIFNKRAMFGFQFRTAYLSVDFLDRFLSKRSIDDGKLWAIRLLSVACLSLAAKMEECQ 150
I+W+ + T YL+V+ +DRF+S I+ KL +LL + C+ +A+K EE
Sbjct: 217 IDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKL---QLLGITCMLIASKYEEIS 273
Query: 151 VPALSEF-QVDDFDFENKVIQRMELLVLSTLDWKMGSITPFAFLHYFM 197
P L EF + D + + ME+ VL++L +++ T FL F+
Sbjct: 274 APRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFI 321
>sp|O15995|CCNE_HEMPU G1/S-specific cyclin-E OS=Hemicentrotus pulcherrimus GN=CYCE PE=2
SV=1
Length = 424
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 69 CGFSDDCSTRTQSWLKCARLDAIEWIFNKRAMFGFQFRTAYLSVDFLDRFL-SKRSIDDG 127
C DC S + R ++W+ ++ + YL+ DF+DR+L +K ++
Sbjct: 138 CPRKHDCLKSHPSLGERMRAILLDWLIEVCEVYRLHRESFYLAADFVDRYLAAKENVPKT 197
Query: 128 KLWAIRLLSVACLSLAAKMEECQVPALSEFQ-VDDFDFENKVIQRMELLVLSTLDWKMGS 186
KL +L+ + L +AAK+EE P L EF V D + I EL++L TL+W +
Sbjct: 198 KL---QLIGITSLFVAAKLEEIYPPKLHEFAYVTDGACTDDQILDQELIMLMTLNWDLTP 254
Query: 187 ITPFAFLHYFMIKLCGECRPKELVSR 212
IT +L+ FM C +E+ +R
Sbjct: 255 ITVNTWLNAFM----QICNAEEIANR 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,915,884
Number of Sequences: 539616
Number of extensions: 3355687
Number of successful extensions: 7037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 6821
Number of HSP's gapped (non-prelim): 224
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)