BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026995
(229 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449453598|ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
gi|449511798|ref|XP_004164056.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/229 (96%), Positives = 228/229 (99%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+KNGVKFGE+VWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPELLAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|255581778|ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223528666|gb|EEF30681.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/229 (96%), Positives = 227/229 (99%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|224131818|ref|XP_002321186.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|222861959|gb|EEE99501.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 226/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGE+VWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAI+TGKGPIENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIITGKGPIENLLDHLADPVANNAWAYATNFVPGK 265
>gi|115453971|ref|NP_001050586.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|122246902|sp|Q10HD0.1|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|152013384|sp|A2XJ35.1|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group]
gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_11611 [Oryza sativa Japonica Group]
gi|385718838|gb|AFI71846.1| chlorophyll a/b binbing protein [Oryza sativa]
Length = 263
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/229 (96%), Positives = 226/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|126566046|gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
longiflorum]
Length = 264
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTVKSAPQSIWYGADRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 96 LEVIHSRWAMLGALGCVFPELLSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 156 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENLYDH+ADP NNAWAYATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPVENLYDHLADPATNNAWAYATNFVPGK 264
>gi|1262847|gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 246
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 227/229 (99%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 18 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 77
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 78 LEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 137
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 138 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 197
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 198 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 246
>gi|225447576|ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
[Vitis vinifera]
gi|147794485|emb|CAN71610.1| hypothetical protein VITISV_000630 [Vitis vinifera]
Length = 265
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 265
>gi|1345698|sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
Precursor
gi|452314|emb|CAA38025.1| chlorophyll ab binding protein [Gossypium hirsutum]
Length = 265
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
>gi|3126854|gb|AAC15992.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
Length = 263
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YP GAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPSGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>gi|224064850|ref|XP_002301582.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|118486872|gb|ABK95270.1| unknown [Populus trichocarpa]
gi|118488008|gb|ABK95825.1| unknown [Populus trichocarpa]
gi|222843308|gb|EEE80855.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 226/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGE+VWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|359806053|ref|NP_001241179.1| uncharacterized protein LOC100815789 [Glycine max]
gi|255638947|gb|ACU19775.1| unknown [Glycine max]
Length = 265
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|398599|emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
Length = 264
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 36 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIF EGGLDYLGNPNLIHAQS
Sbjct: 96 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMG +EGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 156 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDAFAELKVKELKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 264
>gi|242038937|ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
gi|241920717|gb|EER93861.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
Length = 262
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 34 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 93
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 94 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 153
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKN
Sbjct: 154 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 213
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPG
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 262
>gi|386784577|gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
Length = 265
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYRIGGGPLGEGLD LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGLIEGYRIGGGPLGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLYDHLADPVANNAWAYATNFVPGK 265
>gi|16805332|gb|AAL29886.1|M97171_1 chlorophyll a/b binding protein type II [Glycine max]
Length = 265
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|358248712|ref|NP_001240183.1| uncharacterized protein LOC100793702 [Glycine max]
gi|255635740|gb|ACU18219.1| unknown [Glycine max]
Length = 265
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|218174|dbj|BAA00537.1| type II light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
Length = 263
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LE+IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LELIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ DPVANNAW+YATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVTDPVANNAWSYATNFVPGK 263
>gi|195618248|gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 32 MRRTVKSVPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 91
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 92 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 151
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKN
Sbjct: 152 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 211
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPG
Sbjct: 212 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 260
>gi|102140026|gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 264
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRT S P+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 96 LEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 156 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 264
>gi|226492741|ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays]
gi|195617084|gb|ACG30372.1| chlorophyll a-b binding protein [Zea mays]
gi|238006080|gb|ACR34075.1| unknown [Zea mays]
gi|414871640|tpg|DAA50197.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 1 [Zea mays]
gi|414871641|tpg|DAA50198.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 2 [Zea mays]
gi|414871644|tpg|DAA50201.1| TPA: light harvesting chlorophyll binding protein9 isoform 1 [Zea
mays]
gi|414871645|tpg|DAA50202.1| TPA: light harvesting chlorophyll binding protein9 isoform 2 [Zea
mays]
Length = 260
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 32 MRRTVKSVPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 91
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 92 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 151
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKN
Sbjct: 152 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 211
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPG
Sbjct: 212 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 260
>gi|3560529|gb|AAC34983.1| light harvesting chlorophyll A/B binding protein [Prunus persica]
Length = 265
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN E
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNGE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAM SMFGFFVQAIVTGKGP+ENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMTSMFGFFVQAIVTGKGPVENLYDHVADPVANNAWAYATNFVPGK 265
>gi|149392272|gb|ABR25974.1| chloroplast chlorophyll a-b binding protein precursor [Oryza sativa
Indica Group]
Length = 253
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDY WDTAGLSADPETFA+NRE
Sbjct: 25 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYRWDTAGLSADPETFARNRE 84
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 85 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 144
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 145 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 204
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 205 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 253
>gi|15232249|ref|NP_189406.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
gi|4741950|gb|AAD28772.1|AF134125_1 Lhcb2 protein [Arabidopsis thaliana]
gi|13899125|gb|AAK48984.1|AF370557_1 light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|9294474|dbj|BAB02693.1| light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|30023746|gb|AAP13406.1| At3g27700 [Arabidopsis thaliana]
gi|332643831|gb|AEE77352.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
Length = 266
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DHIADPVANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|357495319|ref|XP_003617948.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355519283|gb|AET00907.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 265
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP++NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|227612|prf||1707316B chlorophyll a/b binding protein 2
Length = 263
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LE+IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LELIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIV GKGPIENL+DH+ DPVANNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVRGKGPIENLFDHVTDPVANNAWAYATNFVPGK 263
>gi|118489455|gb|ABK96530.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 265
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGE+VWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILAKNGVKFGESVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLA FSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLATFSMFGFFVQAIVTGKGPVENLLDHLADPVANNAWAYATNFVPGK 265
>gi|365268967|gb|AEW70716.1| light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys
edulis]
Length = 263
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEF GDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|5714656|gb|AAD48017.1|AF165529_1 chlorophyll a/b binding protein [Rumex palustris]
Length = 264
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 36 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+LSKNGV+FGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 96 LEVIHSRWAMLGALGCVFPELLSKNGVQFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGE LD LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 156 ILAIWACQVVLMGFVEGYRVGGGPLGEDLDKLYPGGAFDPLGLADDPEAFAELKVKELKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPVANNAWAYATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPVENLVDHIADPVANNAWAYATNFVPGK 264
>gi|77157635|dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
Length = 265
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 226/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL++NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|20939|emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 266
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/229 (93%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGC+FPE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|126362926|gb|ABO10493.1| light-harvesting chlorophyll a/b binding protein [Bambusa oldhamii]
Length = 263
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
L VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LGVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYRIGGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWASQVVLMGFVEGYRIGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|297815030|ref|XP_002875398.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321236|gb|EFH51657.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLG+PNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGSPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DHIADPVANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|373882292|gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
Length = 265
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/229 (93%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+LSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEVLSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLD +YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH++DPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLSDPVANNAWAYATNFVPGK 265
>gi|217072028|gb|ACJ84374.1| unknown [Medicago truncatula]
Length = 265
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA +VVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATRVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP++NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|146150146|gb|ABQ02464.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/229 (95%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 SRLAMFSMFGFFVQAIVTGKGPIENLADHVADPVNNNAWAYATNFVPGK 263
>gi|56122690|gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta]
Length = 243
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/229 (95%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 15 MRRTVKSAPPSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 74
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 75 LEVIHCRWAMLGALGCVFPEVLSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 134
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 135 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 194
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 195 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 243
>gi|388515841|gb|AFK45982.1| unknown [Lotus japonicus]
Length = 265
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILERNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWA+ATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|116779784|gb|ABK21429.1| unknown [Picea sitchensis]
gi|116782287|gb|ABK22448.1| unknown [Picea sitchensis]
gi|116785934|gb|ABK23914.1| unknown [Picea sitchensis]
gi|116786318|gb|ABK24064.1| unknown [Picea sitchensis]
gi|116791776|gb|ABK26103.1| unknown [Picea sitchensis]
gi|116793629|gb|ABK26818.1| unknown [Picea sitchensis]
gi|148909078|gb|ABR17641.1| unknown [Picea sitchensis]
gi|224284321|gb|ACN39896.1| unknown [Picea sitchensis]
gi|224284480|gb|ACN39974.1| unknown [Picea sitchensis]
gi|224284600|gb|ACN40033.1| unknown [Picea sitchensis]
gi|224285740|gb|ACN40585.1| unknown [Picea sitchensis]
gi|224285871|gb|ACN40649.1| unknown [Picea sitchensis]
Length = 266
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|297815028|ref|XP_002875397.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321235|gb|EFH51656.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMF MFGFFVQAIVTGKGPIENL+DHIADPVANNAWAYATNFVPGK
Sbjct: 218 GRLAMFPMFGFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 266
>gi|388514477|gb|AFK45300.1| unknown [Medicago truncatula]
Length = 265
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVT KGP++NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTDKGPVQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|340002459|gb|AEK26372.1| chloroplast photosystem II chlorophyll a/b binding protein [Sedum
alfredii]
Length = 265
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGADRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLD +YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLFDHLADPVANNAWAYATNFVPGK 265
>gi|146150144|gb|ABQ02463.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEF GDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
G LAMFSMFGFFVQAIVTGKGPIENL+DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 GSLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNNAWAYATNFVPGK 263
>gi|397789256|gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
Length = 265
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLG GLD +YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGWGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 265
>gi|2765356|emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
Length = 264
Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIF EGGLDYLGNPNLIHAQS
Sbjct: 96 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLD LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 156 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKLYPGGAFDPLGLADDPEAFAELKVKELKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPVANNAWA+ATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAFATNFVPGK 264
>gi|357121229|ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Brachypodium distachyon]
Length = 263
Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGF+EGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKN
Sbjct: 155 ILAIWACQVVLMGFIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTAAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ADPV NNAWA+ATNF PG
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPVENLFDHVADPVNNNAWAFATNFAPGS 263
>gi|9587203|gb|AAF89205.1|AF279248_1 LHCII type II chlorophyll a/b-binding protein [Vigna radiata]
Length = 265
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALG VFPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGIVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFS+FGFFVQAIVTGKGPI+NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 217 GRLAMFSVFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
>gi|407970998|ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloroplastic [Solanum
lycopersicum]
gi|115803|sp|P14278.1|CB24_SOLLC RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCII type I CAB-4; Short=LHCP; Flags:
Precursor
gi|170390|gb|AAA34141.1| chlorophyll a/b-binding protein precursor [Solanum lycopersicum]
Length = 265
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DHI DPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
>gi|90288037|gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 264
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/229 (93%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
M RTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 96 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGF+EGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 156 ILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+AD ANNAWAYATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADLAANNAWAYATNFVPGK 264
>gi|115811|sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
Precursor
gi|20512|emb|CAA28639.1| chlorophyll a/b binding protein [Petunia x hybrida]
Length = 265
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWA+ATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
>gi|115797|sp|P27520.1|CB215_PEA RecName: Full=Chlorophyll a-b binding protein 215, chloroplastic;
AltName: Full=LHCII type II CAB-215; Short=LHCP; Flags:
Precursor
gi|20658|emb|CAA40365.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 265
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWA+ATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|56809381|gb|AAW31512.1| light-harvesting chlorophyll-a/b binding protein Lhcb2 [Pisum
sativum]
Length = 265
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 224/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWA+ATNFVPG+
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>gi|1006704|emb|CAA89823.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Pseudotsuga menziesii]
Length = 234
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 6 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 65
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 66 LEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 125
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 126 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 185
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 186 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 234
>gi|15224465|ref|NP_178582.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
gi|4741946|gb|AAD28770.1|AF134123_1 Lhcb2 protein [Arabidopsis thaliana]
gi|4585935|gb|AAD25595.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15809901|gb|AAL06878.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|17064974|gb|AAL32641.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|17978863|gb|AAL47403.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|20260048|gb|AAM13371.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250799|gb|AEC05893.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
Length = 265
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|116780878|gb|ABK21859.1| unknown [Picea sitchensis]
gi|116780908|gb|ABK21874.1| unknown [Picea sitchensis]
gi|116786305|gb|ABK24058.1| unknown [Picea sitchensis]
gi|116788326|gb|ABK24837.1| unknown [Picea sitchensis]
gi|116791751|gb|ABK26095.1| unknown [Picea sitchensis]
gi|224284118|gb|ACN39796.1| unknown [Picea sitchensis]
gi|224284899|gb|ACN40179.1| unknown [Picea sitchensis]
Length = 266
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|297835814|ref|XP_002885789.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331629|gb|EFH62048.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|116779526|gb|ABK21323.1| unknown [Picea sitchensis]
Length = 266
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+ AP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRIAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|4741948|gb|AAD28771.1|AF134124_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|4741944|gb|AAD28769.1|AF134122_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 265
>gi|116782134|gb|ABK22382.1| unknown [Picea sitchensis]
gi|116783875|gb|ABK23122.1| unknown [Picea sitchensis]
gi|116792700|gb|ABK26462.1| unknown [Picea sitchensis]
gi|148905950|gb|ABR16136.1| unknown [Picea sitchensis]
gi|224285016|gb|ACN40237.1| unknown [Picea sitchensis]
Length = 266
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 158 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP NNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|116782415|gb|ABK22497.1| unknown [Picea sitchensis]
gi|116786586|gb|ABK24164.1| unknown [Picea sitchensis]
gi|116791880|gb|ABK26145.1| unknown [Picea sitchensis]
gi|148908679|gb|ABR17447.1| unknown [Picea sitchensis]
gi|148909254|gb|ABR17727.1| unknown [Picea sitchensis]
gi|224284476|gb|ACN39972.1| unknown [Picea sitchensis]
gi|224285327|gb|ACN40388.1| unknown [Picea sitchensis]
Length = 266
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPESFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADP ANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANNAWAYATNFVPGK 266
>gi|115802|sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
Precursor
gi|19827|emb|CAA41188.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILA+WA QVVLMG +EGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>gi|374412428|gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [Wolffia
australiana]
Length = 264
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/229 (92%), Positives = 225/229 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVK+APQSIWYGPDRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTVKAAPQSIWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGC+FPE+LSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 96 LEVIHARWAMLGALGCIFPELLSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 156 ILAIWATQVVLMGFIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW+YATNFVPG
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWSYATNFVPGN 264
>gi|148909129|gb|ABR17665.1| unknown [Picea sitchensis]
Length = 266
Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QV LMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 158 ILAIWASQVGLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 266
>gi|29123378|gb|AAO62942.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMG +EGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+D I DPVANNAWA+ATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDQINDPVANNAWAFATNFVPGK 265
>gi|312281813|dbj|BAJ33772.1| unnamed protein product [Thellungiella halophila]
Length = 266
Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 158 ILAIWASQVVLMGLIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGK 266
>gi|15224471|ref|NP_178585.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
gi|4874296|gb|AAD31358.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15450349|gb|AAK96468.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|15450494|gb|AAK96540.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|25054901|gb|AAN71932.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250800|gb|AEC05894.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
Length = 265
Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAW+YATNFVPG
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGN 265
>gi|115770|sp|P12328.1|CB21_LEMGI RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|168290|gb|AAA33392.1| chlorophyll a/b apoprotein [Lemna gibba]
Length = 264
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/229 (92%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC+FPE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 96 LEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 156 ILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWA+ATNFVPGK
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
>gi|413968458|gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum]
Length = 271
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/227 (93%), Positives = 220/227 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSY TGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYSTGEFPGDYGWDTAGLSADPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
GRLAMFSMFGFFVQAIVTGKGPIENL DHI DPVANNAWAYATNFVP
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVP 263
>gi|116779839|gb|ABK21446.1| unknown [Picea sitchensis]
Length = 266
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDY WDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYRWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 158 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP NNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPANNNAWAYATNFVPGK 266
>gi|511153|emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum tuberosum]
Length = 265
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/229 (93%), Positives = 221/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+N E
Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNLE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 265
>gi|115806|sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding protein 5, chloroplastic;
AltName: Full=LHCII type I CAB-5; Short=LHCP; Flags:
Precursor
gi|170392|gb|AAA34142.1| chlorophyll a/b-binding protein precursor, partial [Solanum
lycopersicum]
Length = 237
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/229 (94%), Positives = 222/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 9 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 68
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQS
Sbjct: 69 LEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 128
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 129 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 188
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWAYATNFVPGK
Sbjct: 189 GRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
>gi|346987813|gb|AEO51757.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 265
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/229 (94%), Positives = 219/229 (95%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS P SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSVPASIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWATQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIV GKGPIENL D +A PVANNAWAYA NFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVPGKGPIENLSDPLAAPVANNAWAYAPNFVPGK 265
>gi|115775|sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding protein type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20935|emb|CAA31773.1| chlorophylla/b-binding preprotein (AA -37 to 229) [Pinus
thunbergii]
Length = 266
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/229 (91%), Positives = 220/229 (96%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQS
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQS 157
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMG +EGYR+GGG LGEGLDPL PGGAFDPLGLADDP+ AELKVKE+KN
Sbjct: 158 ILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKN 217
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>gi|227138|prf||1615137A chlorophyll a/b binding protein P25
Length = 226
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/226 (93%), Positives = 220/226 (97%)
Query: 4 TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 63
TV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADPETFAKNRELEV
Sbjct: 1 TVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEV 60
Query: 64 IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA 123
IH RWAMLGALGCVFPE+L KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA
Sbjct: 61 IHCRWAMLGALGCVFPELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA 120
Query: 124 IWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRL 183
IWACQVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 121 IWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRL 180
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 181 AMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 226
>gi|225690804|gb|ACO06088.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 263
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/229 (90%), Positives = 218/229 (95%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNG+KFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGF+EGYR+GGGPL EGLD +YPGGAFDPLGLADDPD AELKVKELKN
Sbjct: 155 ILAIWAVQVVLMGFIEGYRVGGGPLDEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL+D + DP NNAWA+AT+F PG
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPVENLFDQLRDPGNNNAWAFATHFCPGS 263
>gi|2570513|gb|AAB82142.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 263
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/229 (89%), Positives = 215/229 (93%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQ+IWYGPDRPKYLGPFSEQTPSYLTG+FPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQNIWYGPDRPKYLGPFSEQTPSYLTGKFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGC FPEILSKNGV FGEAVWFKAGAQIFSEGGLDYLGNP L+ QS
Sbjct: 95 LEVIHSRWAMLGALGCFFPEILSKNGVNFGEAVWFKAGAQIFSEGGLDYLGNPALVRPQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFD LGLA+DPD FAE KVKE N
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDHLGLAEDPDTFAEFKVKEFNN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSM GFFVQAIVTGKGPIEN +DH+ADPVANNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMLGFFVQAIVTGKGPIENFFDHVADPVANNAWAYATNFVPGK 263
>gi|108709619|gb|ABF97414.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 219
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/216 (95%), Positives = 213/216 (98%)
Query: 14 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 73
YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGA
Sbjct: 4 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGA 63
Query: 74 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG
Sbjct: 64 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMG 123
Query: 134 FVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
FVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKNGRLAMFSMFGFFV
Sbjct: 124 FVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 183
Query: 194 QAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
QAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK
Sbjct: 184 QAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 219
>gi|302810440|ref|XP_002986911.1| light-harvesting complex [Selaginella moellendorffii]
gi|300145316|gb|EFJ11993.1| light-harvesting complex [Selaginella moellendorffii]
Length = 267
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/229 (87%), Positives = 212/229 (92%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRT S P SIWYGPDRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 39 MRRTRASTPDSIWYGPDRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 98
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCV PE+L+KNG+KFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQS
Sbjct: 99 LEVIHSRWAMLGALGCVTPELLAKNGIKFGEAVWFKAGSQIFKEGGLDYLGNPNLVHAQS 158
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QV+LMG VEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD FAELKVKELKN
Sbjct: 159 ILAIWASQVILMGAVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTFAELKVKELKN 218
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFF QAIVTGKGPIENL DH+ +P NNAWAYATNF PG
Sbjct: 219 GRLAMFSMFGFFTQAIVTGKGPIENLLDHLDNPTVNNAWAYATNFTPGS 267
>gi|326510279|dbj|BAJ87356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 210/216 (97%)
Query: 14 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 73
YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA
Sbjct: 4 YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 63
Query: 74 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
LGCVFPEILSKNG+KFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMG
Sbjct: 64 LGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMG 123
Query: 134 FVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
F+EGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKNGRLAMFSMFGFFV
Sbjct: 124 FIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFV 183
Query: 194 QAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
QAIVTGKGP+ENL+DHIADPV NNAWA+ATNF PG
Sbjct: 184 QAIVTGKGPVENLFDHIADPVNNNAWAFATNFAPGS 219
>gi|168009155|ref|XP_001757271.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691394|gb|EDQ77756.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/229 (86%), Positives = 214/229 (93%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS SIWYG DRPKYLGPFS +TPSYLTGEF GDYGWDTAGLS+DPETFA+NRE
Sbjct: 37 MRRTVKSTSDSIWYGADRPKYLGPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQS
Sbjct: 97 LEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 265
>gi|452341|emb|CAA48641.1| type II light-harvesting chlorophyll a /b-binding protein [Zea
mays]
Length = 229
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/229 (93%), Positives = 223/229 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGW+TAG+SADPETFA+NRE
Sbjct: 1 MRRTVKSVPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWETAGVSADPETFARNRE 60
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 61 LEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 120
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGY +GGGPLGEGLD +YPGGAF+PLGLADDPD AELKVKELKN
Sbjct: 121 ILAIWACQVVLMGFVEGYGVGGGPLGEGLDKVYPGGAFEPLGLADDPDTAAELKVKELKN 180
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPG
Sbjct: 181 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 229
>gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/231 (87%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/231 (87%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115771|sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|22224|emb|CAA32900.1| unnamed protein product [Zea mays]
gi|194699340|gb|ACF83754.1| unknown [Zea mays]
gi|195607416|gb|ACG25538.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195613460|gb|ACG28560.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/233 (87%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 30 MRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 89
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 90 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 149
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 150 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 209
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPG
Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 262
>gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/231 (87%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|224083006|ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118487931|gb|ABK95787.1| unknown [Populus trichocarpa]
gi|118489514|gb|ABK96559.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489863|gb|ABK96730.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856376|gb|EEE93923.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/230 (87%), Positives = 213/230 (92%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTTKPVPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELK
Sbjct: 155 SILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 264
>gi|115819|sp|P07370.1|CB2B_SOLLC RecName: Full=Chlorophyll a-b binding protein 1B, chloroplastic;
AltName: Full=LHCII type I CAB-1B; Short=LHCP; Flags:
Precursor
gi|170402|gb|AAA34147.1| chlorophyll a/b-binding protein Cab-1B [Solanum lycopersicum]
Length = 265
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|607152|emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/228 (87%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 48 KKVSASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 107
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 108 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 167
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 168 LAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 227
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 275
>gi|349443|gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/233 (86%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRT----VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T V ++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 38 MRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 97
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+LI
Sbjct: 98 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLI 157
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVK
Sbjct: 158 HAQSILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVK 217
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 218 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 270
>gi|607150|emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/228 (87%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 274
>gi|116783114|gb|ABK22798.1| unknown [Picea sitchensis]
Length = 253
Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/229 (87%), Positives = 211/229 (92%), Gaps = 13/229 (5%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA---- 93
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
MLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 94 ---------MLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 144
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 145 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 204
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 205 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 253
>gi|226502080|ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays]
gi|195612774|gb|ACG28217.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 262
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/233 (87%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP+TFA
Sbjct: 30 MRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPKTFA 89
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 90 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 149
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 150 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 209
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPG
Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 262
>gi|449527933|ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|237651899|gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mangifera indica]
Length = 264
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/230 (86%), Positives = 212/230 (92%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MRRT K P S WYGPDR KYL PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRRTAKPTPSGSPWYGPDRVKYLSPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|449433646|ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|449433636|ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 1 [Cucumis sativus]
gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 2 [Cucumis sativus]
gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 3 [Cucumis sativus]
Length = 265
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|14041685|emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/228 (86%), Positives = 212/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV+NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 266
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S+WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTASKAKPVSSGSLWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|116778744|gb|ABK20976.1| unknown [Picea sitchensis]
gi|116779697|gb|ABK21395.1| unknown [Picea sitchensis]
gi|116790882|gb|ABK25775.1| unknown [Picea sitchensis]
gi|148908056|gb|ABR17147.1| unknown [Picea sitchensis]
gi|148908517|gb|ABR17370.1| unknown [Picea sitchensis]
gi|224284311|gb|ACN39891.1| unknown [Picea sitchensis]
gi|224284945|gb|ACN40202.1| unknown [Picea sitchensis]
gi|224285575|gb|ACN40506.1| unknown [Picea sitchensis]
gi|224285579|gb|ACN40508.1| unknown [Picea sitchensis]
Length = 274
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/228 (87%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|219879136|gb|ACL50948.1| putative chloroplast chlorophyll a/b binding protein [Solanum
nigrum]
Length = 249
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/231 (87%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 19 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 78
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 79 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 138
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 139 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEI 198
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 199 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 249
>gi|224085884|ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118485884|gb|ABK94788.1| unknown [Populus trichocarpa]
gi|222857174|gb|EEE94721.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/230 (87%), Positives = 212/230 (92%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTTKPVPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELK
Sbjct: 155 SILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWAYATNF PGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFAPGK 264
>gi|467794|emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/228 (86%), Positives = 212/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV+NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNNAWAYATNFVPGK 274
>gi|224927|prf||1204205B protein 1B,chlorophyll binding
Length = 265
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 217/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSQGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|158523323|gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein
[Populus euphratica]
Length = 263
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/230 (87%), Positives = 212/230 (92%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 34 MRKTTKPVPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 93
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 94 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 153
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELK
Sbjct: 154 SILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 213
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSM GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 NGRLAMFSMLGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|115792|sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
Precursor
gi|19823|emb|CAA36957.1| unnamed protein product [Nicotiana tabacum]
Length = 265
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTVAKPVASSSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 216/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGE VWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEVVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+LIHA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|359480215|ref|XP_002273106.2| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Vitis vinifera]
Length = 263
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/229 (86%), Positives = 212/229 (92%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MR++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRKSFAKPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP L+HAQS
Sbjct: 95 LEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPGLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQV+LMG VEGYRIGGGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KN
Sbjct: 155 ILAIWACQVILMGAVEGYRIGGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 216/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFREGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE ++PLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVNPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265
>gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/233 (85%), Positives = 216/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV K+ P S WYGPDR KYLGPFS +PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTVIKAKPVSSGSPWYGPDRVKYLGPFSGNSPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115825|sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor
gi|224932|prf||1204205G protein 3C,chlorophyll binding
Length = 267
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/233 (85%), Positives = 216/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRT-VKSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K+ P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115805|sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
Precursor
gi|19829|emb|CAA36958.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|260914751|gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
Length = 261
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/205 (97%), Positives = 202/205 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS
Sbjct: 97 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMGFVEGYR+GGGPLGEGLDP+YPGGAFDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIEN 205
GRLAMFSMFGFFVQAIVTGKGPIEN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIEN 241
>gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLVDHLADPVNNNAWAYATNFVPGK 267
>gi|168044688|ref|XP_001774812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529316|dbj|BAD08519.1| light-harvesting chlorophyll a/b-binding protein 2 [Physcomitrella
patens subsp. patens]
gi|162673836|gb|EDQ60353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSA-PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV KSA SIWYG DRPKYLGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 37 MRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGCV PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|223974123|gb|ACN31249.1| unknown [Zea mays]
Length = 233
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/233 (87%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 61 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 120
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPG
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN 233
>gi|224284929|gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/228 (86%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PS+LTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSASASTSPWYGPDRVLYLGPFSGEPPSHLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTATKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|167997439|ref|XP_001751426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066892|ref|XP_001785364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066898|ref|XP_001785367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663036|gb|EDQ49825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663039|gb|EDQ49828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697407|gb|EDQ83743.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/231 (85%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSA-PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV KSA SIWYG DRPK+LGPFS +TPSYLTGEF GDYGWDTAGLS+DPETFA+N
Sbjct: 37 MRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|115768|sp|P08221.1|CB21_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167523|gb|AAA33124.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 255
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 25 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 84
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 85 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 144
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 145 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 204
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 205 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
>gi|688315|gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/228 (86%), Positives = 210/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLTDHLADPVNNNAWAYATNFVPGK 274
>gi|116782449|gb|ABK22510.1| unknown [Picea sitchensis]
gi|116782855|gb|ABK22691.1| unknown [Picea sitchensis]
gi|116791804|gb|ABK26115.1| unknown [Picea sitchensis]
gi|148908337|gb|ABR17282.1| unknown [Picea sitchensis]
Length = 278
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/228 (85%), Positives = 212/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLGLADDPD FAELKVKELKNG
Sbjct: 171 LAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|224114357|ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|222859802|gb|EEE97349.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/230 (87%), Positives = 211/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTTKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELK
Sbjct: 155 SILAIWATQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNF PGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFAPGK 264
>gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/234 (85%), Positives = 214/234 (91%), Gaps = 5/234 (2%)
Query: 1 MRR-TVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+ T K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 34 MRKSTAKAKPAAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETF 93
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 94 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 153
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKV 175
IHAQSILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKV
Sbjct: 154 IHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKV 213
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagus crenata]
Length = 264
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/227 (88%), Positives = 210/227 (92%), Gaps = 2/227 (0%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R V S S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 40 RNVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 97
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSIL
Sbjct: 98 VIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIL 157
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWA QV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKELKNGR
Sbjct: 158 AIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGR 217
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 218 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPGK 264
>gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
Length = 267
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTASKSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYR+ GGPLGE DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267
>gi|449455992|ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
gi|449525484|ref|XP_004169747.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/233 (86%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|115804|sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding protein 25, chloroplastic;
AltName: Full=LHCII type I CAB-25; Short=LHCP; Flags:
Precursor
gi|20483|emb|CAA26211.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|168006129|ref|XP_001755762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693081|gb|EDQ79435.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/229 (83%), Positives = 210/229 (91%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MR+T + SIWYG DRPKYLGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+NRE
Sbjct: 37 MRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQS
Sbjct: 97 LEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QV+LMG VEGYR+ GGPLG+ DP+YPGG+FDPLGLADDPD FAELKVKE+KN
Sbjct: 157 ILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 265
>gi|413968348|gb|AFW90512.1| chlorophyll a/b-binding protein [Phaseolus vulgaris]
Length = 263
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV +++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 33 MRKTVTKQASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 93 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|115798|sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
Precursor
gi|20479|emb|CAA26213.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSA----PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFP DYGWDTAGLSADPETFA
Sbjct: 35 MRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+ ++NG+KFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|115812|sp|P27491.1|CB27_TOBAC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCII type I CAB-7; Short=LHCP; Flags:
Precursor
gi|19837|emb|CAA41187.1| chlorophyll a /b binding protein [Nicotiana tabacum]
Length = 267
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
>gi|225446831|ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147799091|emb|CAN74831.1| hypothetical protein VITISV_023674 [Vitis vinifera]
Length = 270
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/233 (85%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++V + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 38 MRKSVAKSKAVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 97
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+
Sbjct: 98 KNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLV 157
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 158 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 217
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 218 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 270
>gi|358248490|ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
max]
gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-binding protein [Glycine max]
gi|255636158|gb|ACU18421.1| unknown [Glycine max]
Length = 264
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 34 MRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|168018669|ref|XP_001761868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168018837|ref|XP_001761952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686923|gb|EDQ73309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687007|gb|EDQ73393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSA-PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV KSA SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 37 MRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|353167261|gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/230 (86%), Positives = 211/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T P S WYGPDR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTFNKPPSGSPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115781|sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor
gi|19819|emb|CAA36955.1| unnamed protein product [Nicotiana tabacum]
Length = 266
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>gi|356559635|ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
[Glycine max]
Length = 264
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 34 MRKTASKTVTSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115810|sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic;
AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags:
Precursor
gi|19833|emb|CAA36956.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 HIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|388503990|gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/219 (89%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 48 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 108 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 167
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 168 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|168043963|ref|XP_001774452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|4757371|dbj|BAA77273.1| chlorophyll a/b-binding protein precursor [Physcomitrella patens]
gi|162674164|gb|EDQ60676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV S SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 38 MRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 97
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 98 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 157
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLG+ DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 158 QSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 217
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 268
>gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
Length = 267
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/233 (85%), Positives = 216/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++V K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKSVAKAKPASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|115808|sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
Precursor
gi|20487|emb|CAA26209.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA LSADPETFA
Sbjct: 35 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>gi|115817|sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20661|emb|CAA32657.1| unnamed protein product [Pinus sylvestris]
Length = 278
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/228 (85%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSI
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLGLADDPD FAELKVKE+KNG
Sbjct: 171 LAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|255557387|ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTAAKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|167997305|ref|XP_001751359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697340|gb|EDQ83676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV-KSA-PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV KSA SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 37 MRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/231 (83%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS ++PSYLT EFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTAAKPVSSSSPWYGPDRVKYLGPFSGESPSYLTSEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|356559639|ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 1 [Glycine max]
gi|356559641|ref|XP_003548107.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 2 [Glycine max]
gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 3 [Glycine max]
Length = 264
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/231 (85%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 34 MRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRT-VKSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K+ P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLG ADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGPADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|188572008|gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophiopogon japonicus]
Length = 264
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/230 (86%), Positives = 212/230 (92%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T KS S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTGKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWA QVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ F+ELKVKE+K
Sbjct: 155 SILAIWASQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFSELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115814|sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCII type I CAB-8; Flags: Precursor
gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein [Pisum sativum]
Length = 268
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 36 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFS 95
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 96 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 155
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 156 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 215
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct: 216 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
>gi|242045502|ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/233 (85%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 30 MRKTAAKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 89
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 90 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 149
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 150 HAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 209
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGN 262
>gi|359806638|ref|NP_001241277.1| uncharacterized protein LOC100805310 [Glycine max]
gi|255647962|gb|ACU24438.1| unknown [Glycine max]
Length = 263
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/231 (86%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 33 MRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 93 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|168053792|ref|XP_001779318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669234|gb|EDQ55825.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/229 (84%), Positives = 211/229 (92%), Gaps = 2/229 (0%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MR++ S SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+NRE
Sbjct: 37 MRKS--SGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQS
Sbjct: 95 LEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQV+LMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KN
Sbjct: 155 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 263
>gi|255646685|gb|ACU23816.1| unknown [Glycine max]
Length = 263
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/231 (85%), Positives = 215/231 (93%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV +++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 33 MRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 93 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
Length = 266
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWAYATNFVPGK
Sbjct: 214 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 266
>gi|146403796|gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Artemisia annua]
Length = 254
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/233 (86%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K AP S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 22 MRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 81
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 82 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 141
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 142 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 201
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL D +ADPVANNAW+YATNFVPGK
Sbjct: 202 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADRLADPVANNAWSYATNFVPGK 254
>gi|226358409|gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 264
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/230 (85%), Positives = 211/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K P S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NR
Sbjct: 35 MRKTTKPVPSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115818|sp|P24006.1|CB2A_PYRPY RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type II CAB-1A; Short=LHCP; Flags:
Precursor
gi|218019|dbj|BAA00449.1| light harvesting a/b binding protein [Pyrus pyrifolia var. culta]
Length = 278
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 RKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSI
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLGLADDPD FA++KVKE+KNG
Sbjct: 171 LAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>gi|449459364|ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/229 (86%), Positives = 211/229 (92%), Gaps = 5/229 (2%)
Query: 6 KSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
KSA +S+ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 KSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQS
Sbjct: 97 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ DPV NNAWAYATNFVPGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNNAWAYATNFVPGK 265
>gi|115780|sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|14240|emb|CAA32526.1| chlorophyll a/b binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/227 (85%), Positives = 214/227 (94%), Gaps = 2/227 (0%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
+TV+S+ S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 43 KTVQSS--SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSIL
Sbjct: 101 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL 160
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGR
Sbjct: 161 AIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 220
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK
Sbjct: 221 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
>gi|225463428|ref|XP_002274942.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 1 [Vitis vinifera]
gi|359483839|ref|XP_003633024.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 2 [Vitis vinifera]
gi|147776663|emb|CAN67709.1| hypothetical protein VITISV_003096 [Vitis vinifera]
Length = 264
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/230 (86%), Positives = 210/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T AP S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTGFKAPSGSPWYGPDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|413968456|gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
Length = 233
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/233 (85%), Positives = 216/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K+ P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 61 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 120
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 181 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|385298939|gb|AFI60242.1| light harvesting chlorophyll a/b binding protein, partial [Panicum
virgatum]
Length = 260
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/233 (85%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 28 MRKTAAKPKPAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 87
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 88 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 147
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 148 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 207
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 208 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 260
>gi|168019112|ref|XP_001762089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686806|gb|EDQ73193.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/229 (84%), Positives = 211/229 (92%), Gaps = 2/229 (0%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MR+ S+ SIWYG DRPKYLGP S +TPSYLTGEF GDYGWDTAGLS+DPETFA+NRE
Sbjct: 37 MRKA--SSSDSIWYGADRPKYLGPLSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQS
Sbjct: 95 LEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QV+LMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KN
Sbjct: 155 ILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWAYATNFVPGN 263
>gi|14423661|sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Allergen=Api g 3; Flags: Precursor
gi|1769849|emb|CAA99993.1| chlorophyll a/b binding protein [Apium graveolens]
Length = 264
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/230 (84%), Positives = 215/230 (93%), Gaps = 1/230 (0%)
Query: 1 MRRTVKS-APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+TVK+ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTVKAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQ
Sbjct: 95 ELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SIL+IWA QV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP++ AELKVKELK
Sbjct: 155 SILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>gi|157786302|gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
Length = 266
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct: 214 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|115788|sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
Precursor
gi|169053|gb|AAA63413.1| cab precursor [Pisum sativum]
gi|169055|gb|AAA33651.1| polypeptide 15 precursor [Pisum sativum]
gi|223990|prf||1006296A protein,chlorophyll a/b binding
Length = 269
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 37 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFS 96
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 97 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 156
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 157 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 216
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 217 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
>gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaenopsis hybrid
cultivar]
Length = 277
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/225 (87%), Positives = 209/225 (92%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
++ A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 53 LRPATSSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 112
Query: 65 HSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
HSRWAMLGALGC+FPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAI
Sbjct: 113 HSRWAMLGALGCIFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAI 172
Query: 125 WACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLA 184
WA QVVLMG VEGYRI GGPLGE DPLYPG +FDPLGLADDP+ FAELKVKELKNGRLA
Sbjct: 173 WAVQVVLMGAVEGYRIAGGPLGEITDPLYPGNSFDPLGLADDPEAFAELKVKELKNGRLA 232
Query: 185 MFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
MFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 233 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 277
>gi|194700378|gb|ACF84273.1| unknown [Zea mays]
gi|195619060|gb|ACG31360.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 266
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/219 (89%), Positives = 207/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 48 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 167
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 168 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 266
>gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor [Euphorbia esula]
Length = 268
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/232 (86%), Positives = 215/232 (92%), Gaps = 3/232 (1%)
Query: 1 MRR--TVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+ T K AP S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 37 MRKAATKKVAPSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 96
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIH
Sbjct: 97 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 156
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWACQVVLMG VEGYRI GGPLGE +DP+YPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 157 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKE 216
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ DPV NNAWA+ATNFVPGK
Sbjct: 217 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLFDPVNNNAWAFATNFVPGK 268
>gi|255548299|ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 267
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/232 (85%), Positives = 212/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T ++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 36 MRKTAGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 95
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIH
Sbjct: 96 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIH 155
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 156 AQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKE 215
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 216 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|225463432|ref|XP_002275075.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
Length = 264
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/230 (86%), Positives = 210/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T AP S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTGFKAPSGSPWYGPDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding protein [Fagus sylvatica]
Length = 260
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/226 (88%), Positives = 209/226 (92%), Gaps = 2/226 (0%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R V S S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 37 RNVSSG--SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 94
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSIL
Sbjct: 95 VIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSIL 154
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWA QV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKELKNGR
Sbjct: 155 AIWATQVLLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGR 214
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
LAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPG
Sbjct: 215 LAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAYATNFVPG 260
>gi|224068679|ref|XP_002302798.1| predicted protein [Populus trichocarpa]
gi|222844524|gb|EEE82071.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/219 (89%), Positives = 207/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 48 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVV
Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWATQVV 167
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 168 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|227139|prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/228 (85%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 6 KKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 65
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSI
Sbjct: 66 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSI 125
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLGLADDPD FAELKVKE+KNG
Sbjct: 126 LAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNG 185
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DHIADPV NNAWAYATNFVPGK
Sbjct: 186 RLAMFSMFGFFVQAIVTGKGPIENLADHIADPVNNNAWAYATNFVPGK 233
>gi|148514659|gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/232 (85%), Positives = 212/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRT---VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K+ S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 34 MRKTGAKPKATSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAK 93
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGV+FGEAVWFKAG+QIFSEGGLDYLGNP+LIH
Sbjct: 94 NRELEVIHSRWAMLGALGCVFPELLARNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 153
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 154 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 213
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTG GPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGNGPIENLADHLADPVNNNAWAYATNFVPGK 265
>gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/220 (87%), Positives = 208/220 (94%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWA
Sbjct: 48 DSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQV
Sbjct: 108 MLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQV 167
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMG +EGYR+ GGPLGE DPLYPGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMF
Sbjct: 168 VLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMF 227
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 228 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|449461699|ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
gi|449518125|ref|XP_004166094.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR++ K A S WYGPDR KYLGPFS + PSYL GEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ F+ELKVKEL
Sbjct: 155 QSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKEL 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/219 (89%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 48 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 108 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 167
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 168 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 227
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|168003066|ref|XP_001754234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529314|dbj|BAD08518.1| light-harvesting chlorophyll a/b-binding protein 1 [Physcomitrella
patens subsp. patens]
gi|162694788|gb|EDQ81135.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV S SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 37 MRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLG+ DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|147857734|emb|CAN78667.1| hypothetical protein VITISV_031287 [Vitis vinifera]
Length = 264
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/230 (86%), Positives = 210/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T AP S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTGFKAPSGSPWYGPDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|224284623|gb|ACN40044.1| unknown [Picea sitchensis]
Length = 278
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 211/228 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEG LDYLG+PNL+HAQSI
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGWLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLGLADDPD FAELKVKELKNG
Sbjct: 171 LAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]
Length = 264
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/230 (85%), Positives = 210/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K P S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NR
Sbjct: 35 MRKTTKPVPSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLG ADDP+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGFADDPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|167997791|ref|XP_001751602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697583|gb|EDQ83919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV + +S IWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+D ETFA+N
Sbjct: 37 MRRTVSKSARSDSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDLETFARN 96
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 97 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 216
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 267
>gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/227 (84%), Positives = 210/227 (92%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 41 KTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 100
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSIL
Sbjct: 101 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSIL 160
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWACQV+LMG +EGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+KNGR
Sbjct: 161 AIWACQVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 220
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNF PGK
Sbjct: 221 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFAPGK 267
>gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
sativum]
Length = 266
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 215/233 (92%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct: 214 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|242088861|ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
gi|241945548|gb|EES18693.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
Length = 265
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/219 (89%), Positives = 207/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 167 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/219 (89%), Positives = 206/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 47 SPWYGPDRVKYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQV+
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVI 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 167 LMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|413948509|gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
Length = 302
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/219 (88%), Positives = 206/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 84 SPWYGPDRVLYLGPLSGAPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 143
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 144 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 203
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG +EGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 204 LMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 263
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 264 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 302
>gi|283549609|emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTV----KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 35 MRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFS 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW++ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267
>gi|388503040|gb|AFK39586.1| unknown [Medicago truncatula]
Length = 265
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/232 (86%), Positives = 213/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRR--TVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+ T KS P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 34 MRKATTKKSVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 93
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 94 NRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 153
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QV+LMG VEGYRI GGP GE +DPLYPGG+FDPLGLA+DP+ FAELKVKE
Sbjct: 154 AQSILAIWAVQVILMGAVEGYRIAGGPPGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 213
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNF PGK
Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK 265
>gi|115820|sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20665|emb|CAA32658.1| unnamed protein product [Pinus sylvestris]
Length = 274
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FAKNREL
Sbjct: 47 KKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLA+DP+ FAELKVKE+KNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>gi|115807|sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor
gi|170212|gb|AAA34056.1| chlorophyll a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ G PLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQA+VTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>gi|115800|sp|P09756.1|CB23_SOYBN RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type I CAB-3; Short=LHCP; Flags:
Precursor
gi|18552|emb|CAA31419.1| chlorophyll a/b binding preprotein (AA - 32 to 231) [Glycine max]
Length = 263
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 33 MRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 93 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A PV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
>gi|255647011|gb|ACU23974.1| unknown [Glycine max]
Length = 264
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 210/231 (90%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T S WYGPDR KYLGPFS + PSY TGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 34 MRKTASKTVTSGSPWYGPDRVKYLGPFSGEPPSYRTGEFPGDYGWDTAGLSADPETFAKN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
K+GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KHGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|47169444|pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
Protein Complex From Pea Thylakoid Membranes
Length = 232
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/219 (88%), Positives = 209/219 (95%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAM
Sbjct: 14 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAM 73
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 74 LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 133
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 134 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 193
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 194 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|262410738|gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana]
Length = 274
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 208/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 47 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 106
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 166
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 167 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 226
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RL MFSMFGFFVQAIVTGKGPIE+L DH+ADPV NNAWAY TNFVPGK
Sbjct: 227 RLTMFSMFGFFVQAIVTGKGPIEDLADHLADPVNNNAWAYGTNFVPGK 274
>gi|225461832|ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147833686|emb|CAN73057.1| hypothetical protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/233 (85%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRIGGGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/231 (84%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 34 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALG VFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGSVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|379069812|gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 265
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/231 (85%), Positives = 212/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR++V + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKSVGKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QVVLMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWAVQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|148514657|gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/232 (85%), Positives = 212/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRT---VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K A S WYGPDR YLGP S + PSYLTGEF GDYGWDTAGLSADPETFAK
Sbjct: 34 MRKTGAKPKVASGSPWYGPDRVLYLGPLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAK 93
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGV+FGEAVWFKAG+QIFSEGGLDYLGNP+LIH
Sbjct: 94 NRELEVIHSRWAMLGALGCVFPELLARNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 153
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 154 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 213
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115795|sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding protein C, chloroplastic;
AltName: Full=LHCII type I CAB-C; Short=LHCP; Flags:
Precursor
gi|170210|gb|AAA34055.1| chlorophyll a/b-binding protein-C [Nicotiana plumbaginifolia]
Length = 267
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSA----PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGP+R KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFK G+QIFS+GGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ G PLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>gi|133917261|emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTV----KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 35 MRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFS 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW++ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK 267
>gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/231 (84%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 34 MRKAASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFARN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 154 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFS+FGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 KNGRLAMFSIFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115785|sp|P08963.1|CB22_HORVU RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18943|emb|CAA31232.1| LHC precursor protein (AA -34 to 230) [Hordeum vulgare]
Length = 264
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/230 (83%), Positives = 211/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTAATKKVGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFK G+QIFSEGGL YLGNP+L+HAQ
Sbjct: 95 ELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADD + FAELKVKE+K
Sbjct: 155 SILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>gi|351724927|ref|NP_001235283.1| chlorophyll a/b-binding protein [Glycine max]
gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein [Glycine max]
Length = 263
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV +++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 33 MRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 93 PELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|359754901|gb|AEV59640.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis campestris subsp. johannensis]
gi|359754909|gb|AEV59644.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 239
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 7 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 66
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 67 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 126
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 127 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 186
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 187 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/227 (83%), Positives = 209/227 (92%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
+T + S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF KNRELE
Sbjct: 41 KTKSVSSDSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFTKNRELE 100
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSIL
Sbjct: 101 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSIL 160
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWACQV+LMG +EGYR+ GGPLGE DPLYPGG+FDPLGLA+DP+ FAELKVKE+KNGR
Sbjct: 161 AIWACQVILMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGR 220
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNF PGK
Sbjct: 221 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFAPGK 267
>gi|346987809|gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 263
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/230 (85%), Positives = 210/230 (91%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWD AGLSADPETFAKNR
Sbjct: 34 MRKTGRQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDAAGLSADPETFAKNR 93
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQ
Sbjct: 94 ELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQ 153
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQVVLMG VEGYRI GGPLG+ DPLYPGG+FDPLGLADDP+ FAELKVKE+K
Sbjct: 154 SILAIWACQVVLMGAVEGYRIAGGPLGKVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 213
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGR AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 NGRSAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|326499874|dbj|BAJ90772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTTAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
ginseng]
Length = 266
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/232 (84%), Positives = 214/232 (92%), Gaps = 3/232 (1%)
Query: 1 MRRTVK---SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K ++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 35 MRKTGKKPAASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE
Sbjct: 155 AQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL D +ADPV NNAWAYATNFVPGK
Sbjct: 215 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNNAWAYATNFVPGK 266
>gi|226502967|ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea mays]
gi|194708004|gb|ACF88086.1| unknown [Zea mays]
gi|195613594|gb|ACG28627.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|413950532|gb|AFW83181.1| light harvesting chlorophyll a/b binding protein1 isoform 1 [Zea
mays]
gi|413950533|gb|AFW83182.1| light harvesting chlorophyll a/b binding protein1 isoform 2 [Zea
mays]
Length = 264
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/233 (84%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV----KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S Q PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTAGKPKPAASGSPWYGADRVLYLGPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 211
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPVENLADHLADPVNNNAWAYATNFVPGK 264
>gi|357496387|ref|XP_003618482.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355493497|gb|AES74700.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 265
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/219 (88%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 47 SQWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAVQVI 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 167 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP++NL DHIADPV NNAWA+ATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLKNLADHIADPVNNNAWAFATNFVPGK 265
>gi|359754899|gb|AEV59639.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 239
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/219 (89%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 21 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 80
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 81 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWAVQVI 140
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 141 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 200
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 201 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 239
>gi|255567270|ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/231 (84%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTAAKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWASQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|374095596|gb|AEY85026.1| light-harvesting complex II protein [Cajanus cajan]
Length = 262
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/231 (84%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV +++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 32 MRKTVTKQASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 91
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+ IFSEGGLDYLGNP+LIHA
Sbjct: 92 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSLIFSEGGLDYLGNPSLIHA 151
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 152 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEL 211
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV +NAWAYATNFVPGK
Sbjct: 212 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNSNAWAYATNFVPGK 262
>gi|194703220|gb|ACF85694.1| unknown [Zea mays]
gi|195616570|gb|ACG30115.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|195623468|gb|ACG33564.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|413948507|gb|AFW81156.1| light harvesting chlorophyll a/b binding protein3 isoform 1 [Zea
mays]
gi|413948508|gb|AFW81157.1| light harvesting chlorophyll a/b binding protein3 isoform 2 [Zea
mays]
Length = 265
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/219 (88%), Positives = 206/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGAPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG +EGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 167 LMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|302767620|ref|XP_002967230.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165221|gb|EFJ31829.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/232 (83%), Positives = 213/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRTVKSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T +++ S WYGPDR KYLGPFS ++PSYLTGE+PGDYGWDTAGLSADPETFAK
Sbjct: 32 MRKTGRASSVGGGSPWYGPDRVKYLGPFSGESPSYLTGEYPGDYGWDTAGLSADPETFAK 91
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+LSKNG+KFGEAVWFKAG+QIF EGGLDYLGNP+L+H
Sbjct: 92 NRELEVIHSRWAMLGALGCVFPELLSKNGIKFGEAVWFKAGSQIFKEGGLDYLGNPSLVH 151
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLA+DP+ FAELKVKE
Sbjct: 152 AQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKE 211
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 212 LKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWAYATNFTPGS 263
>gi|359754911|gb|AEV59645.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis lambertii]
Length = 237
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 214/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 5 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 64
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 65 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 124
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 125 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 184
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 185 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 237
>gi|302754140|ref|XP_002960494.1| light-harvesting complex [Selaginella moellendorffii]
gi|300171433|gb|EFJ38033.1| light-harvesting complex [Selaginella moellendorffii]
Length = 272
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/232 (84%), Positives = 213/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRTVKSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K++ S WYGPDR KYLGPFS ++PSYLTGE+PGDYGWDTAGLSADPETFAK
Sbjct: 41 MRKTGKASSVGGGSPWYGPDRVKYLGPFSGESPSYLTGEYPGDYGWDTAGLSADPETFAK 100
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+LSKNG+KFGEAVWFKAG+QIF EGGLDYLGNP+L+H
Sbjct: 101 NRELEVIHSRWAMLGALGCVFPELLSKNGIKFGEAVWFKAGSQIFKEGGLDYLGNPSLVH 160
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLA+DP+ FAELKVKE
Sbjct: 161 AQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKE 220
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 221 LKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAWAYATNFTPGS 272
>gi|242053513|ref|XP_002455902.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
gi|241927877|gb|EES01022.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
Length = 265
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 33 MRKTAAKPKPAASGSPWYGADRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 93 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 152
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 212
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
[Lactuca sativa]
Length = 266
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/219 (87%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAM
Sbjct: 48 SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 108 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 167
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 168 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 227
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPVANNAW+YATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 266
>gi|47168888|pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168890|pdb|1RWT|C Chain C, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168891|pdb|1RWT|D Chain D, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168893|pdb|1RWT|F Chain F, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168894|pdb|1RWT|G Chain G, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168896|pdb|1RWT|I Chain I, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168897|pdb|1RWT|J Chain J, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
Length = 232
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/227 (85%), Positives = 214/227 (94%), Gaps = 2/227 (0%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
+TV+S+ S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 8 KTVQSS--SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 65
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSIL
Sbjct: 66 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL 125
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGR
Sbjct: 126 AIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGR 185
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPGK
Sbjct: 186 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 232
>gi|326493298|dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493328|dbj|BAJ85125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADP+ NNAWA+ATNFVPGK
Sbjct: 214 EVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPINNNAWAFATNFVPGK 266
>gi|326496044|dbj|BAJ90643.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503592|dbj|BAJ86302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 33 MRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+
Sbjct: 93 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 152
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 212
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 213 EVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115799|sp|P15195.1|CB23_POLMU RecName: Full=Chlorophyll a-b binding protein type 1 member F3,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type I F3; Short=CAB-F3; AltName: Full=LHCP;
Flags: Precursor
gi|169440|gb|AAA68425.1| chlorophyll a/b-binding protein F3 [Polystichum munitum]
Length = 265
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/229 (84%), Positives = 207/229 (90%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
M K+ SIWYG DRP YLGPFS PSYL+GEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 MAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+HAQS
Sbjct: 97 LEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQS 156
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQV+LMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADP NNAWAYATNF PGK
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
>gi|168045248|ref|XP_001775090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168045296|ref|XP_001775114.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673541|gb|EDQ60062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673565|gb|EDQ60086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/229 (83%), Positives = 212/229 (92%), Gaps = 2/229 (0%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MR++ S SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+NRE
Sbjct: 37 MRKSAGS--DSIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQS
Sbjct: 95 LEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQV+LMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KN
Sbjct: 155 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 263
>gi|326506218|dbj|BAJ86427.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTTAKAKQVASSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQ VLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQAVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|317454924|gb|ADV19258.1| chlorophyll a/b-binding protein-like protein [Helleborus
orientalis]
Length = 232
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/232 (84%), Positives = 212/232 (91%), Gaps = 3/232 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K+ S WYGPDR KYLGPFS + PSYL+GEFPGDYGWDTAGLSADPETFAK
Sbjct: 1 MRKTVAKPKTVSSSPWYGPDRVKYLGPFSGEAPSYLSGEFPGDYGWDTAGLSADPETFAK 60
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+H
Sbjct: 61 NRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVH 120
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWA QV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 121 AQSILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKE 180
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+KNGRLAMFSMFGFFV AIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 181 IKNGRLAMFSMFGFFVXAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 232
>gi|168025870|ref|XP_001765456.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683306|gb|EDQ69717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/231 (82%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV S SIWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 36 MRKTVSKSSGSDSIWYGADRPKWLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 95
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 96 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 155
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYR+ GGPLG+ DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 156 QSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 215
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 266
>gi|326497177|dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q + WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTAAKAKQLSSSNPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|242053511|ref|XP_002455901.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
gi|241927876|gb|EES01021.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
Length = 266
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 212/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKPKPAASGSPWYGADRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Length = 266
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|122831060|gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Bambusa oldhamii]
Length = 265
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/232 (85%), Positives = 211/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRT---VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K+A S WYGPDR YLGP S + PSYLTGEF GDYGWDTAGLSADPETFAK
Sbjct: 34 MRKTGAKPKAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFAGDYGWDTAGLSADPETFAK 93
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIH
Sbjct: 94 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIH 153
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE
Sbjct: 154 AQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE 213
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAY NFVPGK
Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYVPNFVPGK 265
>gi|357118764|ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357118766|ref|XP_003561120.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357118768|ref|XP_003561121.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELE+IHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELELIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|224381552|gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasminoides]
Length = 264
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/230 (84%), Positives = 209/230 (90%), Gaps = 1/230 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
M+RT + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MKRTTRPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIH RWAM GALGCVFPE+LS+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+LIHAQ
Sbjct: 95 ELEVIHCRWAMPGALGCVFPELLSRNGVKFGEAVWFKAGSQIFQEGGLDYLGNPSLIHAQ 154
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLAD P+ FAELKVKE+K
Sbjct: 155 SILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADVPEAFAELKVKEIK 214
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 215 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
>gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|82654917|sp|P12330.2|CB21_ORYSJ RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|50252362|dbj|BAD28469.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|50252884|dbj|BAD29115.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|113631172|dbj|BAF24853.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|215737437|dbj|BAG96567.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737443|dbj|BAG96573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737483|dbj|BAG96613.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765877|dbj|BAG87574.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201978|gb|EEC84405.1| hypothetical protein OsI_30987 [Oryza sativa Indica Group]
Length = 265
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/234 (84%), Positives = 211/234 (90%), Gaps = 5/234 (2%)
Query: 1 MRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 32 MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 91
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L
Sbjct: 92 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 151
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKV 175
IHAQSILAIWA QVVLMG VEGYRI GGPLGE +DPLYPGGAFDPLGLADDP+ FAELKV
Sbjct: 152 IHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKV 211
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|357132518|ref|XP_003567877.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357132520|ref|XP_003567878.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357132522|ref|XP_003567879.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357132524|ref|XP_003567880.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357132526|ref|XP_003567881.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 263
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 31 MRKTVAKAKPVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 90
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 91 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 150
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 151 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 210
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 263
>gi|359754907|gb|AEV59643.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 236
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/232 (84%), Positives = 213/232 (91%), Gaps = 4/232 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 5 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 64
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 65 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 124
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 125 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 184
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPG
Sbjct: 185 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 236
>gi|224284588|gb|ACN40027.1| unknown [Picea sitchensis]
Length = 278
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEQPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|226510115|ref|NP_001148439.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195619284|gb|ACG31472.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414881723|tpg|DAA58854.1| TPA: chlorophyll a-b binding protein 2 [Zea mays]
Length = 264
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTAAKPKPAASGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 211
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 264
>gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 213/233 (91%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K P S WYGPDR KYLGPFS + PSYLTGEF GDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFAGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH+RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|326509659|dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+ +
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSFV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADP+ NNAWA+ATNFVPGK
Sbjct: 214 EVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPINNNAWAFATNFVPGK 266
>gi|326523787|dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKVKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|115774|sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
Precursor
gi|20471|emb|CAA26210.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP TFA
Sbjct: 34 MRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNR+LEVIH RW MLGALGCVFPE+ ++NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+
Sbjct: 94 KNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAEL+VK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|109157229|pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
Length = 232
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/219 (88%), Positives = 208/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAM
Sbjct: 14 SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAM 73
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALG VFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 74 LGALGSVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVI 133
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFG
Sbjct: 134 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG 193
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 194 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 232
>gi|607148|emb|CAA57407.1| light harvesting chlorophyll a /b-binding protein Lhcb1*1 [Picea
abies]
Length = 278
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNLIHAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLIHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|162463409|ref|NP_001105545.1| chlorophyll a-b binding protein M9, chloroplastic precursor [Zea
mays]
gi|115815|sp|P27497.1|CB29_MAIZE RecName: Full=Chlorophyll a-b binding protein M9, chloroplastic;
AltName: Full=LHCII type I CAB-M9; Short=LHCP; Flags:
Precursor
gi|22355|emb|CAA39376.1| light-harvesting chlorophyll a/b binding protein [Zea mays]
Length = 265
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/219 (87%), Positives = 206/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG +EGYR+ GGPLGE +DPLYPGG FDPLGLADDP+ FA++KVKELKNGRLAMFSMFG
Sbjct: 167 LMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|116781997|gb|ABK22330.1| unknown [Picea sitchensis]
Length = 278
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|116784226|gb|ABK23263.1| unknown [Picea sitchensis]
gi|116792001|gb|ABK26194.1| unknown [Picea sitchensis]
gi|224285000|gb|ACN40229.1| unknown [Picea sitchensis]
gi|224285305|gb|ACN40377.1| unknown [Picea sitchensis]
Length = 278
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|357152998|ref|XP_003576305.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357153000|ref|XP_003576306.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357153003|ref|XP_003576307.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S Q PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKAKPVPSGSPWYGADRVLYLGPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPGK
Sbjct: 214 EVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGK 266
>gi|116791684|gb|ABK26071.1| unknown [Picea sitchensis]
gi|148908641|gb|ABR17429.1| unknown [Picea sitchensis]
Length = 278
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|116785761|gb|ABK23849.1| unknown [Picea sitchensis]
Length = 278
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/228 (84%), Positives = 209/228 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE DP+YPGG FDPLG ADDPD FAELKVKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKNG 230
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 231 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
>gi|297306780|dbj|BAJ08392.1| light harvesting chlorophyll a/b-binding protein Lhcb1 [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSA----PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKAKPVSSSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|162461878|ref|NP_001105427.1| light harvesting chlorophyll a /b binding protein [Zea mays]
gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b binding protein [Zea mays]
Length = 265
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/219 (89%), Positives = 205/219 (93%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAV FKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVGFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELK GRLAMFSMFG
Sbjct: 167 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKKGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/219 (88%), Positives = 205/219 (93%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 49 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 108
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QV+
Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVL 168
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 169 LMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAY TNFV GK
Sbjct: 229 FFVQAIVTGKGPLENLADHLADPVNNNAWAYPTNFVSGK 267
>gi|414881719|tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precursor [Zea mays]
Length = 264
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTAAKPKPAASGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 211
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ DPV NNAWAYATNFVPGK
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|414881722|tpg|DAA58853.1| TPA: hypothetical protein ZEAMMB73_924562 [Zea mays]
Length = 259
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 27 MRKTAAKPKPAASGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTAGLSADPETFA 86
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 87 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 146
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 147 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 206
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct: 207 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 259
>gi|326488085|dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTTAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFNEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLGDHITDPVNNNAWAFATNFVPGK 266
>gi|357159898|ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 265
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T SA S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 33 MRKTAAKPKVSASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 93 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 153 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 212
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWA+ATNFVPGK
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 265
>gi|357159913|ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T SA S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTAAKPKVSASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 211
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWA+ATNFVPGK
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 264
>gi|359754905|gb|AEV59642.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 238
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/232 (84%), Positives = 212/232 (91%), Gaps = 4/232 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 7 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 66
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 67 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 126
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAE KVK
Sbjct: 127 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEXKVK 186
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPG
Sbjct: 187 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 238
>gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|82654918|sp|P12331.2|CB22_ORYSJ RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|53793541|dbj|BAD52990.1| putative a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113533024|dbj|BAF05407.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|125526713|gb|EAY74827.1| hypothetical protein OsI_02717 [Oryza sativa Indica Group]
gi|125605334|gb|EAZ44370.1| hypothetical protein OsJ_28992 [Oryza sativa Japonica Group]
gi|215767332|dbj|BAG99560.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768322|dbj|BAH00551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|385718790|gb|AFI71822.1| chlorophyll a/b-binding protein [Oryza sativa]
Length = 261
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/233 (84%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ +A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 29 MRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 88
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 89 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 148
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 149 HAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 208
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 209 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
>gi|31753114|gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 55 MRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFA 114
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 115 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 174
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 175 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 234
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWA+ATNFVPGK
Sbjct: 235 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 287
>gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYGPDR KYLGPFS + PSYLTGE PGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTAAKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEKPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWA+L LGCVFPE+LS+NGVKFGEAVWFK G+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAILERLGCVFPELLSRNGVKFGEAVWFKVGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b binding protein [Vigna radiata]
Length = 263
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 211/231 (91%), Gaps = 2/231 (0%)
Query: 1 MRRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TV + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 33 MRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 92
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALG VFPE LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHA
Sbjct: 93 RELEVIHSRWAMLGALGIVFPEPLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP YPGG+FDPLGLADDP+ FAELKVKEL
Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPTYPGGSFDPLGLADDPEAFAELKVKEL 212
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFS+FGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 213 KNGRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|133917263|emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
gi|283549607|emb|CAX64457.1| major chlorophyll a/b binding protein LHCb1.1 precursor [Spinacia
oleracea]
Length = 267
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/219 (85%), Positives = 206/219 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAM
Sbjct: 49 SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAM 108
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+
Sbjct: 109 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVI 168
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 169 LMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAW +ATNFVPG
Sbjct: 229 FFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGN 267
>gi|357118770|ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
Length = 233
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 1 MRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 60
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELE+IHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 61 KNRELELIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 120
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 121 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 180
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233
>gi|168003213|ref|XP_001754307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694409|gb|EDQ80757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/218 (86%), Positives = 205/218 (94%)
Query: 12 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
IWYG DRPKYLGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAML
Sbjct: 50 IWYGADRPKYLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAML 109
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGCV PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+L
Sbjct: 110 GALGCVTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVIL 169
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGPLG+ DP+YPGG+FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 229
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FVQAIVTGKGP+ENL DH+ADPVANNAWAYATNFVPG
Sbjct: 230 FVQAIVTGKGPLENLNDHLADPVANNAWAYATNFVPGN 267
>gi|115786|sp|P06671.1|CB22_MAIZE RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|22357|emb|CAA68451.1| LHCP [Zea mays]
Length = 265
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/219 (88%), Positives = 203/219 (92%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 47 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ F ELKVKELK GRLAM SMFG
Sbjct: 167 LMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DHIADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>gi|226263|prf||1503276A chlorophyll a/b binding protein
Length = 245
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/231 (84%), Positives = 209/231 (90%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 15 MRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 74
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFSEGGLDYLGN +LIHA
Sbjct: 75 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEACWFKAGSQIFSEGGLDYLGNQSLIHA 134
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPL LADDP+ FAELKVKEL
Sbjct: 135 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEL 194
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 195 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 245
>gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
gi|227611|prf||1707316A chlorophyll a/b binding protein 1
Length = 265
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/234 (83%), Positives = 210/234 (89%), Gaps = 5/234 (2%)
Query: 1 MRRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 32 MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 91
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELE+IHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L
Sbjct: 92 AKNRELELIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 151
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKV 175
IHAQSILAIWA QVVLMG VEGYRI GGPLGE +DPLYPGGAFDPLGLADDP+ FAELKV
Sbjct: 152 IHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKV 211
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KE+K GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 212 KEIKKGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|115832|sp|P20866.1|CB2_PHYPA RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169020|gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella patens]
Length = 269
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/230 (83%), Positives = 211/230 (91%), Gaps = 2/230 (0%)
Query: 1 MRRTV-KSA-PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTV KSA +IWYG DRPK+LGPFS +TPSYL GEF GDYGWDTAGLS+DPETFA+N
Sbjct: 38 MRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARN 97
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGC+ PE+L+K+GVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HA
Sbjct: 98 RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 157
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+
Sbjct: 158 QSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEI 217
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYA PG
Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
>gi|357148841|ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846020 [Brachypodium
distachyon]
Length = 560
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/217 (86%), Positives = 203/217 (93%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG
Sbjct: 44 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 103
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLM
Sbjct: 104 ALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLM 163
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFF
Sbjct: 164 GAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFF 223
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 224 VQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 260
>gi|302566696|gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKAKPVSSGSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH++DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAFATNFVPGK 266
>gi|326510047|dbj|BAJ87240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTTAKAKQVSSSSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALG +FPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGSIFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIVDPVNNNAWAFATNFVPGK 266
>gi|326520097|dbj|BAK03973.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|18461220|dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
Japonica Group]
gi|113533621|dbj|BAF06004.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|125527527|gb|EAY75641.1| hypothetical protein OsI_03546 [Oryza sativa Indica Group]
gi|125571846|gb|EAZ13361.1| hypothetical protein OsJ_03282 [Oryza sativa Japonica Group]
gi|215678907|dbj|BAG96337.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679047|dbj|BAG96477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764952|dbj|BAG86649.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/219 (87%), Positives = 204/219 (93%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 47 SPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIW CQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 167 LMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>gi|298573438|gb|ADI88502.1| protoporphyrin IX magnesium chelatase [Pteris vittata]
Length = 266
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/223 (86%), Positives = 204/223 (91%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
S SIWYG DRP YLGPFS PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE+IH+
Sbjct: 44 STSGSIWYGADRPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELELIHA 103
Query: 67 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF+EGGLDYLGNP+L+HAQSILAIWA
Sbjct: 104 RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWA 163
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMF 186
QVVLMG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMF
Sbjct: 164 FQVVLMGAVEGYRVAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMF 223
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGPIENL DH+ADP NNAWAYATNF PGK
Sbjct: 224 SMFGFFVQAIVTGKGPIENLSDHLADPTVNNAWAYATNFTPGK 266
>gi|359754903|gb|AEV59641.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 235
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/229 (84%), Positives = 210/229 (91%), Gaps = 4/229 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 7 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 66
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 67 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 126
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 127 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 186
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNF
Sbjct: 187 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 235
>gi|115779|sp|P12471.1|CB21_SOYBN RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169933|gb|AAA33949.1| chlorophyll a/b-binding protein precursor, partial [Glycine max]
Length = 245
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 209/231 (90%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 15 MRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 74
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFSEGGLDYLGN +LIHA
Sbjct: 75 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHA 134
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPL LADDP+ FAELKVKE+
Sbjct: 135 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEI 194
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A+PV NNAWAYATNFVPGK
Sbjct: 195 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
>gi|115789|sp|P04780.1|CB22_PETSP RecName: Full=Chlorophyll a-b binding protein 22L, chloroplastic;
AltName: Full=LHCII type I CAB-22L; Short=LHCP; Flags:
Precursor
gi|20475|emb|CAA26212.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/233 (81%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRT-VKSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K+ P S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 35 MRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 94
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+ ++NGVKFGEAVW KAG+QIFSEGGLDYLGNP+L+
Sbjct: 95 KNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLV 154
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQV+LMG VEGYR+ GGPLG +DPLYPGG+FDPLGLA+DP+ FAELKVK
Sbjct: 155 HAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E KNGRLAMFSMFGFF+QAIVTGKGP+ENL DH+ DPV NNAW+YATNFVP K
Sbjct: 215 ETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
>gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
gi|115783|sp|P04778.1|CB1C_ARATH RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=Chlorophyll a-b protein 140;
Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
Precursor
gi|9972353|gb|AAG10603.1|AC008030_3 Putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|16376|emb|CAA27543.1| chlorophyll a/b binding protein (LHCP AB 140) [Arabidopsis
thaliana]
gi|15010744|gb|AAK74031.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|15293003|gb|AAK93612.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|20258873|gb|AAM14108.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332193030|gb|AEE31151.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
Length = 267
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 155 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|18397288|ref|NP_564340.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=Chlorophyll a-b protein 165;
Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
Precursor
gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=Chlorophyll a-b protein 180;
Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
Precursor
gi|9972354|gb|AAG10604.1|AC008030_4 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein (LHCP AB 65) [Arabidopsis thaliana]
gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|15809862|gb|AAL06859.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|17065476|gb|AAL32892.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21555860|gb|AAM63949.1| photosystem II type I chlorophyll a /b binding protein, putative
[Arabidopsis thaliana]
gi|22135932|gb|AAM91548.1| photosystem II type I chlorophyll a/b binding protein, putative
[Arabidopsis thaliana]
gi|23397170|gb|AAN31868.1| putative photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana]
gi|332193028|gb|AEE31149.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|332193029|gb|AEE31150.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
Length = 267
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 155 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (AA -28 to 235) [Oryza sativa]
Length = 263
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/220 (87%), Positives = 204/220 (92%), Gaps = 1/220 (0%)
Query: 11 SIWYGPDRPKYLGPFS-EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA
Sbjct: 44 SPWYGADRVLYLGPLSGREPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLG LGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QV
Sbjct: 104 MLGGLGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQV 163
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMG VEGYRI GGPLGE +DPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMF
Sbjct: 164 VLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 223
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 224 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
>gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (AA -31 to 235) [Oryza sativa]
Length = 266
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/235 (82%), Positives = 210/235 (89%), Gaps = 6/235 (2%)
Query: 1 MRRTVK-----SAPQSIWYGPDRPKYLGPFS-EQTPSYLTGEFPGDYGWDTAGLSADPET 54
MR+T ++ S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPET
Sbjct: 32 MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGREPPSYLTGEFPGDYGWDTAGLSADPET 91
Query: 55 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 114
FAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+
Sbjct: 92 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPS 151
Query: 115 LIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELK 174
LIHAQSILAIWA QVVLMG VEGYRI GGPLGE +DPLYPGGAFDPLGLADDP+ AELK
Sbjct: 152 LIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEACAELK 211
Query: 175 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VK++KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 212 VKKIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|285804077|gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lycoris radiata]
Length = 265
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/231 (83%), Positives = 208/231 (90%), Gaps = 2/231 (0%)
Query: 1 MRRTVKS--APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T+ + S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTIAKPVSSGSPWYGADRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFS+GGLDYLGN +L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSDGGLDYLGNSSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWA QVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGFFVQAIVTGKGP+ENL D +ADPV NNAW YATNFVPGK
Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNNAWPYATNFVPGK 265
>gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
gi|297339430|gb|EFH69847.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 30 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 89
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 90 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 149
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 150 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 209
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAFATNFVPGK 262
>gi|115773|sp|P04159.1|CB21_PEA RecName: Full=Chlorophyll a-b binding protein AB96; AltName:
Full=LHCII type I CAB-AB96; Short=LHCP; AltName:
Full=Major 15
gi|169051|gb|AAA33650.1| polypeptide 15 precursor, partial [Pisum sativum]
Length = 228
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/223 (85%), Positives = 208/223 (93%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
++ S W+GPD KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS
Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 65
Query: 67 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA
Sbjct: 66 RWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA 125
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMF 186
QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+ P+ FAELKVKELKNGRLAMF
Sbjct: 126 TQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMF 185
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFV AIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 186 SMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
>gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21387019|gb|AAM47913.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 267
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGG-PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G PLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 155 AQSILAIWATQVILMGAVEGYRVAGNEPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding protein 2 precursor, 5' partial; 1-750
[Arabidopsis thaliana]
Length = 249
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 17 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 76
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 77 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 136
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 137 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 196
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 197 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 249
>gi|63003222|dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]
Length = 231
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/229 (82%), Positives = 209/229 (91%), Gaps = 4/229 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYGPDR KYLGPFS + PSYLTGEF GDYGWDTAGLSADPETFA
Sbjct: 3 MRKTAAKPKPAASGSPWYGPDRVKYLGPFSGEAPSYLTGEFAGDYGWDTAGLSADPETFA 62
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH+RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 63 KNRELEVIHARWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 122
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 123 HAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 182
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNF
Sbjct: 183 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 231
>gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
gi|297336680|gb|EFH67097.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 209/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 30 MRKTTAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 89
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 90 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 149
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 150 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 209
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 210 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNNAWAFATNFVPGK 262
>gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|13926260|gb|AAK49602.1|AF372886_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16226426|gb|AAL16165.1|AF428397_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930391|gb|AAL31882.1|AF419548_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930467|gb|AAL31919.1|AF419587_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16364|emb|CAA45790.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128230|gb|AAC26710.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|14517452|gb|AAK62616.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|15027899|gb|AAK76480.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|17473689|gb|AAL38301.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|19310503|gb|AAL84985.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|19310521|gb|AAL84994.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|20148517|gb|AAM10149.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|20197168|gb|AAM14954.1| photosystem II type I chlorophyll a b binding protein [Arabidopsis
thaliana]
gi|23296426|gb|AAN13114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|110739111|dbj|BAF01472.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|330253878|gb|AEC08972.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 265
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 33 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 92
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 93 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 152
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 153 AQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 212
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 213 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|21138|emb|CAA34459.1| unnamed protein product [Sinapis alba]
gi|21140|emb|CAA33903.1| chlorophyll a/b-binding polypeptide [Sinapis alba]
Length = 266
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/232 (83%), Positives = 211/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TVK + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/233 (81%), Positives = 205/233 (87%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTG+FPGDYGWDTAGLSADPETF+
Sbjct: 34 MRKTAAKAKQVSSSSPWYGADRVLYLGPLSREPPSYLTGDFPGDYGWDTAGLSADPETFS 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG FDPLGLA+ P F LKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGRFDPLGLAERPQAFDALKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGF VQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFLVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
Length = 233
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/233 (83%), Positives = 211/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 1 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAR 60
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 61 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 120
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 121 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 180
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 181 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 233
>gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
Length = 266
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/232 (83%), Positives = 211/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+TVK + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLAADPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|47026843|gb|AAT08647.1| chloroplast chlorophyll A-B binding protein 3C [Hyacinthus
orientalis]
Length = 220
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/216 (87%), Positives = 204/216 (94%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGP+R KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 5 SPWYGPERVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 64
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+
Sbjct: 65 LGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVL 124
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFG
Sbjct: 125 LMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 184
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
FFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFV
Sbjct: 185 FFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFV 220
>gi|115782|sp|P04784.1|CB21_WHEAT RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|170674|gb|AAA34260.1| chlorophyll a/b-binding protein precursor [Triticum aestivum]
Length = 266
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/233 (81%), Positives = 206/233 (88%), Gaps = 4/233 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFS+GGLDYLGNP+L+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQS+LAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+ P FAELKVK
Sbjct: 154 HAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+E+L DHIADPV NNAW ATNFVPGK
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
>gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
gi|297327173|gb|EFH57593.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
Length = 245
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 13 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 72
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+H
Sbjct: 73 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVH 132
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 133 AQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 192
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 193 ELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 245
>gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|11908034|gb|AAG41446.1|AF326864_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|12642854|gb|AAK00369.1|AF339687_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16366|emb|CAA45789.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128229|gb|AAC26709.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|20197164|gb|AAM14951.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
gi|21539563|gb|AAM53334.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|25083751|gb|AAN72114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|330253879|gb|AEC08973.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 266
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/232 (82%), Positives = 210/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ K + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
gi|297325337|gb|EFH55757.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/232 (82%), Positives = 210/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ K + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 LKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVNNNAWAFATNFVPGK 266
>gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza sativa Indica Group]
Length = 265
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/219 (84%), Positives = 200/219 (91%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG DR YLGP S + PSYLTGEF GDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 47 SPWYGADRVLYLGPLSGEPPSYLTGEFSGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 106
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIW CQVV
Sbjct: 107 LGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVV 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
MG VEGYR+ GGPLGE +DPLYPGG+ DPLGLADDP+ FAELKVKE+KNGRLAM SMFG
Sbjct: 167 FMGAVEGYRVAGGPLGEVVDPLYPGGSLDPLGLADDPEAFAELKVKEIKNGRLAMLSMFG 226
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+EN+ DH+ADPV NNAWAYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENITDHLADPVNNNAWAYATNFVPGK 265
>gi|53748425|emb|CAH59405.1| light harvesting protein 1 [Plantago major]
Length = 229
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 202/216 (93%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA
Sbjct: 10 SSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV
Sbjct: 70 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 129
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKELKNGRLAMFSMF
Sbjct: 130 ILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMF 189
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
GFFVQAIVTGKGP+ENL DH+ADPV NNAWA+
Sbjct: 190 GFFVQAIVTGKGPLENLADHLADPVNNNAWAFCHKL 225
>gi|413968514|gb|AFW90594.1| chloroplast chlorophyll a/b binding protein [Solanum tuberosum]
Length = 276
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/229 (82%), Positives = 205/229 (89%), Gaps = 2/229 (0%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGC FPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 95 RELEVIHCRWAMLGALGCDFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEI 214
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFS FGFFVQAIVTGKGP+ENL DH+ADPV NNA P
Sbjct: 215 KNGRLAMFSTFGFFVQAIVTGKGPLENLADHLADPVNNNACPTPQTLSP 263
>gi|21592428|gb|AAM64379.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
Length = 266
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/232 (82%), Positives = 210/232 (90%), Gaps = 3/232 (1%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ K + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIHSRWAMLGALGCVFPE+L++NGV+FGEAVWFKAG+QIFS+GGLDYLGNP+L+HA
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVEFGEAVWFKAGSQIFSDGGLDYLGNPSLVHA 154
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVKE
Sbjct: 155 QSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKE 214
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 LKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/233 (81%), Positives = 208/233 (89%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG +R KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+
Sbjct: 35 MRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NREL+VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 95 NRELQVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP+ FAELKVK
Sbjct: 155 AQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFF QAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFAQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|53627212|gb|AAU89257.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus flexilis]
gi|53627214|gb|AAU89258.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus lambertiana]
gi|53627216|gb|AAU89259.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monticola]
gi|53627218|gb|AAU89260.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus strobus]
Length = 256
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/213 (87%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSFASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 104 EVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|53627220|gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monophylla]
Length = 256
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSVASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|53627222|gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus remota]
Length = 256
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSVASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|145079054|tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm13 [Acetabularia acetabulum]
Length = 255
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/231 (80%), Positives = 203/231 (87%), Gaps = 3/231 (1%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRT K SAP S+WYGPDRP++LGPFS TPSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 23 MRRTQKKGSAPDSVWYGPDRPQFLGPFSGDTPSYLTGEFPGDYGWDTAGLSADPETFRRY 82
Query: 59 RELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RELE+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGN NL+H
Sbjct: 83 RELELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLVH 142
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAI CQVVLMG +E YR+ GGPLGEGLDPLYPG FDPLGLADDPD FAELK+KE
Sbjct: 143 AQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKE 202
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
+KNGRLAMFSMFGFFVQA+VTGKGPIEN +H+ADP + NAW YAT FVPG
Sbjct: 203 IKNGRLAMFSMFGFFVQAVVTGKGPIENWAEHVADPFSVNAWNYATKFVPG 253
>gi|116789194|gb|ABK25154.1| unknown [Picea sitchensis]
Length = 240
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/229 (81%), Positives = 197/229 (86%), Gaps = 26/229 (11%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+L+K GVKFGEAVWFKA
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKA----------------------- 134
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
IWA QVVLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KN
Sbjct: 135 ---IWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 191
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 192 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 240
>gi|53627226|gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus nelsonii]
Length = 256
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSVVSASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|53627210|gb|AAU89256.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus chiapensis]
Length = 256
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/213 (87%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSFASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L+KNGVKFGEAVWFKAGAQIFSEGGLD+LGNP+LIHAQSI
Sbjct: 104 EVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDHLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|53627224|gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus longaeva]
Length = 253
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 198/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 41 KKSVVSASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 100
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 101 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 160
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 161 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 220
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 221 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 253
>gi|3417451|dbj|BAA32346.1| light-harvesting chlorophyll a/b-binding protein of photosystem II
[Cryptomeria japonica]
Length = 266
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/231 (80%), Positives = 202/231 (87%), Gaps = 2/231 (0%)
Query: 1 MRRTVKSAP--QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRR AP S WYGPDR KYLGPFS + PSYLTGEFP G DPETFAKN
Sbjct: 36 MRRGATKAPVSSSPWYGPDRVKYLGPFSGEPPSYLTGEFPVTTGGTPPVCQPDPETFAKN 95
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH+RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HA
Sbjct: 96 RELEVIHARWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQV+LMG VEGYR+ GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKE+
Sbjct: 156 QSILAIWACQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLADDPEAFAELKVKEI 215
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KNGRLAMFSMFGF+VQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 216 KNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>gi|53627206|gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus merkusii]
Length = 256
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/213 (85%), Positives = 196/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|115784|sp|P08222.1|CB22_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|167525|gb|AAA33125.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 206
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/206 (89%), Positives = 196/206 (95%)
Query: 24 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILS 83
PFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCVFPE+LS
Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60
Query: 84 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG 143
+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI GG
Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 120
Query: 144 PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 203
PLGE DP+YPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+
Sbjct: 121 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
Query: 204 ENLYDHIADPVANNAWAYATNFVPGK 229
ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 181 ENLADHLADPVNNNAWAYATNFVPGK 206
>gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
Length = 273
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/233 (80%), Positives = 206/233 (88%), Gaps = 4/233 (1%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG +R KYLGPFS + PSYLTG+FPGDYGWDTAGLSA PETF +
Sbjct: 35 MRKTVAKPKGPSGSPWYGSERVKYLGPFSGEPPSYLTGQFPGDYGWDTAGLSAVPETFVR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+H
Sbjct: 95 NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVH 154
Query: 118 AQSILAIWACQVVLMGFVEGYRI-GGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
AQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPLGLA DP FAELKVK
Sbjct: 155 AQSILAIWATQVILMGAVEGYRVPGDGPLGEAEDLLYPGGSFDPLGLATDPVAFAELKVK 214
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>gi|53627202|gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus radiata]
Length = 256
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/213 (85%), Positives = 196/213 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding protein [Triticum durum]
Length = 250
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 198/222 (89%), Gaps = 4/222 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLG S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 29 MRKTAAKAKQVSSSSPWYGSDRVLYLGSLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 88
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWF AG+QIFSEGGLDYLGNP+L+
Sbjct: 89 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFMAGSQIFSEGGLDYLGNPSLV 148
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 149 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 208
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNA
Sbjct: 209 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNA 250
>gi|53627200|gb|AAU89251.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus ponderosa]
Length = 256
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/213 (85%), Positives = 195/213 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLG DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGXVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|20218821|emb|CAC84495.1| putative chlorophyll A-B binding protein type I [Pinus pinaster]
Length = 195
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/194 (93%), Positives = 189/194 (97%)
Query: 36 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 95
FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWF
Sbjct: 2 RFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 61
Query: 96 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPG 155
KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDPLYPG
Sbjct: 62 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 121
Query: 156 GAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVA 215
GAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADP A
Sbjct: 122 GAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTA 181
Query: 216 NNAWAYATNFVPGK 229
NNAWAYATNFVPGK
Sbjct: 182 NNAWAYATNFVPGK 195
>gi|53627208|gb|AAU89255.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus roxburghii]
Length = 256
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/213 (85%), Positives = 195/213 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPL LADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLRLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|53627204|gb|AAU89253.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus contorta]
Length = 256
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/213 (85%), Positives = 195/213 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ A S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSVPASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPL E DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLREVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
RLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 256
>gi|110224742|emb|CAL07971.1| chlorophyll a/b-binding protein, photosystem II [Platanus x
acerifolia]
Length = 235
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/217 (85%), Positives = 200/217 (92%), Gaps = 1/217 (0%)
Query: 11 SIW-YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S W +G +R YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWA
Sbjct: 19 STWCFGFERYGYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 78
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV
Sbjct: 79 MLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQV 138
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
+LMG VEGYR+ GGPLG+ PLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMF
Sbjct: 139 ILMGAVEGYRVAGGPLGKVTGPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 198
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFV
Sbjct: 199 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFV 235
>gi|302840684|ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
gi|300262795|gb|EFJ46999.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
Length = 255
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/228 (78%), Positives = 202/228 (88%), Gaps = 2/228 (0%)
Query: 2 RRTVKSAPQSI-WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+ K AP I WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 26 KTVAKPAPSGIEWYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYR 85
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELE+IH+RWAMLGALGCV PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ
Sbjct: 86 ELELIHARWAMLGALGCVTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQ 145
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
+I+A ACQV+LMG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+K
Sbjct: 146 NIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIK 205
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
NGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 206 NGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 253
>gi|53627228|gb|AAU89265.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Picea sitchensis]
Length = 253
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/210 (86%), Positives = 193/210 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKELKNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
RLAMFSMFGFF QAIVTGKGPIENL DH+A
Sbjct: 224 RLAMFSMFGFFXQAIVTGKGPIENLADHLA 253
>gi|145079233|tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm12 [Acetabularia acetabulum]
Length = 255
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/231 (78%), Positives = 201/231 (87%), Gaps = 3/231 (1%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRT K SAP S+WYGPDRP++LGPFS PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 23 MRRTQKKSSAPDSVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPETFRRY 82
Query: 59 RELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RE E+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGN NL+H
Sbjct: 83 REQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLVH 142
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAI CQVVLMG +E YR+ GGPLGEGLDPLYPG FDPLGLADDPD FAELK+KE
Sbjct: 143 AQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKE 202
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
+KNGRLAMFSMFGF+VQA+VTGKGPIEN +H+A+P + NAW YAT FVPG
Sbjct: 203 IKNGRLAMFSMFGFYVQAVVTGKGPIENWAEHVANPFSVNAWNYATKFVPG 253
>gi|67772801|gb|AAY81729.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus gerardiana]
Length = 253
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/210 (86%), Positives = 194/210 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKSFASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
RLAMFSMFGFFVQAIVTGKGPIENL DH+A
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLA 253
>gi|115791|sp|P09755.1|CB22_SOYBN RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18548|emb|CAA31418.1| chlorophyll a/b binding preprotein (AA -33 to 223) [Glycine max]
Length = 256
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/229 (80%), Positives = 200/229 (87%), Gaps = 13/229 (5%)
Query: 6 KSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
K+AP+++ WYGPDR KYLGPFS + PSYLTGEF GLSADPETFAKNRE
Sbjct: 36 KTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF--------HGLSADPETFAKNRE 87
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQS
Sbjct: 88 LEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 147
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP+ AELKVKELKN
Sbjct: 148 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKN 207
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYAT PGK
Sbjct: 208 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
>gi|53627198|gb|AAU89250.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus echinata]
Length = 253
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/210 (85%), Positives = 193/210 (91%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 163
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 164 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 223
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
RLAMFSMFGFFVQAIVTGKGPIENL DH+A
Sbjct: 224 RLAMFSMFGFFVQAIVTGKGPIENLADHLA 253
>gi|20269804|gb|AAM18057.1|AF495473_1 major light-harvesting complex II protein m1 [Chlamydomonas
reinhardtii]
gi|15430558|dbj|BAB64414.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|15430566|dbj|BAB64418.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|27542565|gb|AAO16493.1| light-harvesting complex II protein [Chlamydomonas reinhardtii]
Length = 256
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/231 (77%), Positives = 200/231 (86%), Gaps = 5/231 (2%)
Query: 2 RRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTVK S P S WYGP+RP +LG F+ + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 25 RRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADPETFK 84
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ RELE+IH+RWAMLGALGC+FPE+L GV FGEAVWFKAGAQIF EGGLDYLGNPNL+
Sbjct: 85 RYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGNPNLV 144
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAI QV+LMG +EGYR+ GGPLGEGLD LYPGG+FDPLGLADDPD FAELKVK
Sbjct: 145 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+A+P NNA+AYAT F P
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 255
>gi|19423285|gb|AAL88456.1|AF479777_1 major light-harvesting complex II protein m10 [Chlamydomonas
reinhardtii]
Length = 256
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/231 (76%), Positives = 202/231 (87%), Gaps = 5/231 (2%)
Query: 2 RRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTVK S P S WYGP+RP +LG F+ + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 24 RRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADPETFK 83
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ RELE+IH+RWAMLGALGC+ PE+L+K+G +FGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 84 RYRELELIHARWAMLGALGCITPELLAKSGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLV 143
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQ+I+A A QV+LMG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVK
Sbjct: 144 HAQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 203
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMFSMFGFFVQAIVTGKGPI+NL DH+++P NNA+A+AT F P
Sbjct: 204 EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 254
>gi|302833824|ref|XP_002948475.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
gi|300266162|gb|EFJ50350.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
Length = 257
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/231 (77%), Positives = 200/231 (86%), Gaps = 5/231 (2%)
Query: 2 RRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTVK S P S WYGPDRP +LG F+ + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 25 RRTVKPAAKSSTPDSFWYGPDRPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADPETFK 84
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ RELE+IH+RWAMLGALGC+FPE+L GV FGE+VWFKAGAQIF EGGLDYLGNP+L+
Sbjct: 85 RYRELELIHARWAMLGALGCIFPELLGSYGVPFGESVWFKAGAQIFQEGGLDYLGNPSLV 144
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAI QV+LMG +EGYR+ GGPLGEGLD LYPGG+FDPLGLADDPD FAELKVK
Sbjct: 145 HAQSILAILGTQVILMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+A+P NNA+AYAT F P
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGVNNAFAYATKFTP 255
>gi|3386569|gb|AAC28490.1| photosystem II type II chlorophyll a/b binding protein [Sorghum
bicolor]
Length = 191
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/191 (94%), Positives = 187/191 (97%)
Query: 39 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 98
GDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEIL+KNGVKFGEAVWFKAG
Sbjct: 1 GDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILAKNGVKFGEAVWFKAG 60
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAF 158
AQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYR+GGGPLGEGLD +YPGGAF
Sbjct: 61 AQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAF 120
Query: 159 DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
DPLGLADDPD AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNA
Sbjct: 121 DPLGLADDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNA 180
Query: 219 WAYATNFVPGK 229
WAYATNFVPG
Sbjct: 181 WAYATNFVPGN 191
>gi|302851938|ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
gi|300257133|gb|EFJ41385.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
Length = 254
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGCV PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCVTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|209868191|gb|ACI90635.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus yunnanensis]
Length = 254
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/205 (86%), Positives = 190/205 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 49 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 108
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 109 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 168
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 169 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 228
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENL 206
RLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 229 RLAMFSMFGFFVQAIVTGKGPIENL 253
>gi|302832904|ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
gi|300266818|gb|EFJ51004.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
Length = 254
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|302856312|ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
gi|302856626|ref|XP_002959664.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254677|gb|EFJ39271.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254888|gb|EFJ39374.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
Length = 254
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|87313225|gb|ABD37909.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Chlamydomonas incerta]
Length = 249
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/231 (77%), Positives = 199/231 (86%), Gaps = 5/231 (2%)
Query: 2 RRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTVK S P S WYGP+RP +LG F+ + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 18 RRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADPETFK 77
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ RELE+IH+RWAMLGALGC+FPE+L GV FGEAVWFKAGAQIF EGGLDYLGN NL+
Sbjct: 78 RYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGNSNLV 137
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAI QV+LMG +EGYR+ GGPLGEGLD LYPGG+FDPLGLADDPD F+ELKVK
Sbjct: 138 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFSELKVK 197
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+A+P NNA+AYAT F P
Sbjct: 198 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNNAFAYATKFTP 248
>gi|543938|sp|Q00827.1|CB48_MAIZE RecName: Full=Chlorophyll a-b binding protein 48, chloroplastic;
AltName: Full=LHCII type I CAB-48; Short=LHCP; Flags:
Precursor
gi|22228|emb|CAA44888.1| chlorophyll a/b binding protein precursor [Zea mays]
Length = 264
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/233 (78%), Positives = 199/233 (85%), Gaps = 4/233 (1%)
Query: 1 MRRTV-KSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T K P S WYG DR YLGP S PSYLTGEFPGDYGWDT GLSADPETFA
Sbjct: 32 MRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWA+ LGCVFPE+L++NGVKFGE VWFKAG+QIFSEGGL + GNP+L+
Sbjct: 92 KNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLV 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGY + GG LGE +DPLY GG+FDPLGL DDP++FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVK 211
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ DPV NNAWAYATNFVPGK
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>gi|302854172|ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
gi|300256057|gb|EFJ40333.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
Length = 254
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 252
>gi|74272671|gb|ABA01131.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Chlamydomonas incerta]
Length = 257
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 175/230 (76%), Positives = 203/230 (88%), Gaps = 4/230 (1%)
Query: 2 RRTVKSAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAK 57
+ KSAP S +YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 26 KTAAKSAPASSGIEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKR 85
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RELE+IH+RWAMLGALGC+ PE+L+KNG +FGEAVWFKAGAQIFSEGGLDYLGNP+L+H
Sbjct: 86 YRELELIHARWAMLGALGCLTPELLAKNGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLVH 145
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQ+I+A ACQV+LMG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE
Sbjct: 146 AQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKE 205
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+++P NNA+A+AT F P
Sbjct: 206 IKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLSNPTVNNAFAFATKFTP 255
>gi|159471686|ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
gi|15430556|dbj|BAB64413.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|15430564|dbj|BAB64417.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|158277154|gb|EDP02923.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
Length = 249
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/228 (78%), Positives = 201/228 (88%), Gaps = 3/228 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R+ + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 20 RSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 79
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELE+IH+RWAMLGALGC+ PE+L+KNG+ FGEAVWFKAGAQIF+EGGL+YLGN NLIHAQ
Sbjct: 80 ELELIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGAQIFAEGGLNYLGNENLIHAQ 139
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+K
Sbjct: 140 SIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIK 199
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
NGRLAMFSMFGFFVQAIVTGKGPI+NL DH+A+P A NA+AYAT F P
Sbjct: 200 NGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|209868185|gb|ACI90632.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis var. henryi]
gi|209868187|gb|ACI90633.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus hwangshanensis]
gi|209868189|gb|ACI90634.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis]
Length = 254
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 189/205 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 49 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 108
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 109 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 168
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 169 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 228
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENL 206
RLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 229 RLAMFSMFGFFVQAIVTGKGPIENL 253
>gi|209868183|gb|ACI90631.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus bungeana]
Length = 254
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/205 (86%), Positives = 190/205 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 49 KKSFASASPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 108
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSI
Sbjct: 109 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSI 168
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 169 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 228
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENL 206
RLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 229 RLAMFSMFGFFVQAIVTGKGPIENL 253
>gi|87313227|gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/228 (77%), Positives = 201/228 (88%), Gaps = 3/228 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R+ + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 17 RSARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 76
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELE+IH+RWAMLGALGC+ PE+L+KNG+ FGEAVWFKAG+QIF+EGGL+YLGN NL+HAQ
Sbjct: 77 ELELIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGSQIFAEGGLNYLGNENLVHAQ 136
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+K
Sbjct: 137 SIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIK 196
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
NGRLAMFSMFGFFVQAIVTGKGPI+NL DH+A+P A NA+AYAT F P
Sbjct: 197 NGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 244
>gi|209868193|gb|ACI90636.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus massoniana]
Length = 233
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/205 (86%), Positives = 189/205 (92%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++ SA S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 28 KKVSASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 87
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 88 EVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 147
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAIWACQV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNG
Sbjct: 148 LAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKNG 207
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENL 206
RLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 208 RLAMFSMFGFFVQAIVTGKGPIENL 232
>gi|67772803|gb|AAY81730.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus krempfii]
Length = 250
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/213 (84%), Positives = 192/213 (90%), Gaps = 4/213 (1%)
Query: 1 MRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ S S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 38 MRKSATKKFASESPSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 97
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LI
Sbjct: 98 RNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 157
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDPD FAELKVK
Sbjct: 158 HAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVK 217
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 209
ELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH
Sbjct: 218 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLADH 250
>gi|125620170|gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera]
Length = 269
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/231 (75%), Positives = 199/231 (86%), Gaps = 4/231 (1%)
Query: 1 MRRTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR T+ QSI WYGPDR KY+GPFS QTPSYLTGEFPGDYGWD+AGLSA+PETFA
Sbjct: 36 MRSTLSRPRQSITGGPWYGPDRVKYMGPFSGQTPSYLTGEFPGDYGWDSAGLSAEPETFA 95
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH+RWAMLG +GC+ PE+L +NGVK GEAVWFKAG+QIF + GL+YLG+P LI
Sbjct: 96 KNRELEVIHARWAMLGTVGCIVPELLERNGVKIGEAVWFKAGSQIFRDEGLNYLGDPKLI 155
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQ+ILA+ A QV+LMG +EGYRI GGPLGE DPLYPGG FDPL LADDP++FA LKVK
Sbjct: 156 HAQNILAVLAAQVILMGAIEGYRISGGPLGEPTDPLYPGGNFDPLHLADDPEEFAILKVK 215
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMF+M GF+VQAIVTGKGP+ENLYDH+ADP NNAWA+AT F P
Sbjct: 216 EIKNGRLAMFAMLGFYVQAIVTGKGPLENLYDHLADPFKNNAWAFATAFDP 266
>gi|87313235|gb|ABD37914.1| light-harvesting chlorophyll-a/b binding protein LhcbM9
[Chlamydomonas incerta]
Length = 254
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/216 (79%), Positives = 197/216 (91%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+KNG KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCLTPELLAKNGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKELKNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|159471942|ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|12658406|gb|AAK01125.1|AF330793_1 light-harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158277282|gb|EDP03051.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 195/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 32 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 91
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+KNG+ FGEAVWFKAGAQIF+EGGL+YLGN NLIHAQSI+A A QVV+
Sbjct: 92 GALGCITPELLAKNGIPFGEAVWFKAGAQIFAEGGLNYLGNENLIHAQSIIATLAFQVVV 151
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 152 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 211
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPI+NL DH+A+P A NA+AYAT F P
Sbjct: 212 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 247
>gi|302842165|ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
gi|300261970|gb|EFJ46179.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
Length = 251
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+HA
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 140
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+
Sbjct: 141 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 200
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 201 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302842321|ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
gi|300262048|gb|EFJ46257.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
Length = 251
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+HA
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 140
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+
Sbjct: 141 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 200
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 201 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|302840162|ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
gi|300263246|gb|EFJ47448.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 21 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 80
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+HA
Sbjct: 81 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 140
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+
Sbjct: 141 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 200
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 201 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 249
>gi|384253059|gb|EIE26534.1| chlorophyll a/b-binding protein P25 [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/230 (78%), Positives = 203/230 (88%), Gaps = 3/230 (1%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRTVK + P S+WYG DRPK+LGPFS TPSYL+GE+PGDYGWDTAGLSADPETFAK
Sbjct: 5 MRRTVKGKTTPTSMWYGEDRPKWLGPFSGNTPSYLSGEYPGDYGWDTAGLSADPETFAKY 64
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RE+EVIH+RWAMLGALGC+ PE+L+KNGV FGEAVW+KAGAQIF+ GGLDYLGNP+L+HA
Sbjct: 65 REIEVIHARWAMLGALGCLTPELLAKNGVSFGEAVWWKAGAQIFAPGGLDYLGNPSLVHA 124
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKE 177
QSI+AI A QV+LMG +EGYR+ GGP GEGLD +YPGG FDPLGLADDPD FAELKVKE
Sbjct: 125 QSIIAILASQVLLMGAIEGYRVYGGPGGEGLDKVYPGGDYFDPLGLADDPDTFAELKVKE 184
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+KNGRLAMFSMFGFFVQAIVTGKGP+ENL H+ADP NN +A AT FVP
Sbjct: 185 IKNGRLAMFSMFGFFVQAIVTGKGPLENLESHLADPSVNNGFAAATKFVP 234
>gi|302835026|ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
gi|300265820|gb|EFJ50010.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
Length = 252
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R + P++ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 22 RAARVVPRAAIEWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYR 81
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+HA
Sbjct: 82 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 141
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+
Sbjct: 142 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 201
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 202 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 250
>gi|302849646|ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
gi|300258258|gb|EFJ42496.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
Length = 250
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 198/229 (86%), Gaps = 4/229 (1%)
Query: 3 RTVKSAPQSI--WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R + P++ WYGPDRPK+LGPFSE PSYLTGEFPGDYGWDTAGLSADPETF + R
Sbjct: 20 RAARVVPRAAIEWYGPDRPKFLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKRYR 79
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
ELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+HA
Sbjct: 80 ELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLVHA 139
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+
Sbjct: 140 QSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEI 199
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 200 KNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 248
>gi|159491492|ref|XP_001703699.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
gi|15430554|dbj|BAB64412.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|15430562|dbj|BAB64416.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|158270548|gb|EDO96390.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
Length = 257
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 173/230 (75%), Positives = 201/230 (87%), Gaps = 4/230 (1%)
Query: 2 RRTVKSAPQSI---WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAK 57
+ K AP S +YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 26 KTAAKQAPASSGIEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKR 85
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RELE+IH+RWAMLGALGC+ PE+L+K+G +FGEAVWFKAGAQIFSEGGLDYLGNP+L+H
Sbjct: 86 YRELELIHARWAMLGALGCITPELLAKSGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLVH 145
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQ+I+A A QV+LMG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE
Sbjct: 146 AQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKE 205
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+KNGRLAMFSMFGFFVQAIVTGKGPI+NL DH+++P NNA+A+AT F P
Sbjct: 206 IKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 255
>gi|87313229|gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/216 (80%), Positives = 195/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 12 WYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 71
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+KNG+ FGEAVWFKAG+QIF+EGGL+YLGN NL+HAQSI+A A QVV+
Sbjct: 72 GALGCITPELLAKNGIPFGEAVWFKAGSQIFAEGGLNYLGNENLVHAQSIIATLAFQVVV 131
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 132 MGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 191
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPI+NL DH+A+P A NA+AYAT F P
Sbjct: 192 FVQAIVTGKGPIQNLDDHLANPTAVNAFAYATKFTP 227
>gi|87313209|gb|ABD37901.1| light-harvesting chlorophyll-a/b binding protein LhcbM4
[Acutodesmus obliquus]
Length = 255
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 191/217 (88%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGP+R K+LGPFS TP YLTGEF GDYGWDTAGLSADPETF + RELE+IH+RWAMLG
Sbjct: 39 FYGPNRAKWLGPFSTATPGYLTGEFAGDYGWDTAGLSADPETFRRYRELELIHARWAMLG 98
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGC+ PE+L+KNGV FGEAVWFKAGAQIF EGGL+YLGN +LIHAQSILA ACQV+LM
Sbjct: 99 ALGCITPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNSSLIHAQSILATLACQVILM 158
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G VEGYR+ GGP GEGLDPLYPG AFDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFF
Sbjct: 159 GLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFF 218
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VQAIVTG+GPI NL H++DP NNAW YAT FVPG
Sbjct: 219 VQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPGN 255
>gi|159474462|ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
gi|158275827|gb|EDP01602.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
Length = 254
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 196/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+KNG KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+L
Sbjct: 97 GALGCLTPELLAKNGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 252
>gi|302842163|ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
gi|300261969|gb|EFJ46178.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/231 (78%), Positives = 200/231 (86%), Gaps = 5/231 (2%)
Query: 2 RRTVKSAPQSI---WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
+ + +APQ WYGPDRPK+LGPFSE TP+YLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 38 KSSGSTAPQLSSWPWYGPDRPKFLGPFSEGDTPAYLTGEFPGDYGWDTAGLSADPETFKR 97
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
RELE+IH+RWAMLGALGCV PE+LSK GV FGEAVWFKAGAQIF+EGGL+YLGN NL+
Sbjct: 98 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNENLV 157
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSI+A A QVV+MG E YR GGPLGEGLDPL+PGGAFDPLGLADDPD FAELKVK
Sbjct: 158 HAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVK 217
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
E+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P A NA+AYAT F P
Sbjct: 218 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVNAFAYATKFTP 268
>gi|302765457|ref|XP_002966149.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165569|gb|EFJ32176.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/233 (77%), Positives = 201/233 (86%), Gaps = 7/233 (3%)
Query: 3 RTVKSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R+V+ + +WYGPDR K+LGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR
Sbjct: 32 RSVQCQAKVSMDLWYGPDRVKFLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFARNR 91
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
LE+IH RWAMLGALGCVFPE+LSK GV+F E VWFKAG+QIFS+GGLDYLGNPNL+HA
Sbjct: 92 ALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVHA 151
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVK 176
QSILAIWACQV+LMG VEGYRI G P +GEG D LYPGG FDPLG ADDP+ AELKVK
Sbjct: 152 QSILAIWACQVILMGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVK 210
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ +PV NNAWAYAT FVPG
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPGS 263
>gi|302800774|ref|XP_002982144.1| light-harvesting complex [Selaginella moellendorffii]
gi|300150160|gb|EFJ16812.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 362 bits (928), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 181/233 (77%), Positives = 201/233 (86%), Gaps = 7/233 (3%)
Query: 3 RTVKSAPQ---SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
R+V+ + +WYGPDR K+LGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR
Sbjct: 32 RSVQCQAKVSMDLWYGPDRVKFLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFARNR 91
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
LE+IH RWAMLGALGCVFPE+LSK GV+F E VWFKAG+QIFS+GGLDYLGNPNL+HA
Sbjct: 92 ALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVHA 151
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVK 176
QSILAIWACQV+LMG VEGYRI G P +GEG D LYPGG FDPLG ADDP+ AELKVK
Sbjct: 152 QSILAIWACQVILMGLVEGYRINGLPDVGEGGD-LYPGGQYFDPLGFADDPETLAELKVK 210
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ +PV NNAWAYAT FVPG
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNNAWAYATRFVPGS 263
>gi|87313211|gb|ABD37902.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Acutodesmus obliquus]
Length = 250
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/211 (81%), Positives = 187/211 (88%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
WYGP+R K+LGPFS TP YLTGEF GDYGWDTAGLSADPETF + RELE+IH+RWAMLG
Sbjct: 40 WYGPERAKWLGPFSTNTPGYLTGEFAGDYGWDTAGLSADPETFRRYRELELIHARWAMLG 99
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGC+ PE+L+KNGV FGEAVWFKAGAQIF EGGL+YLGN +LIHAQSILA ACQV+LM
Sbjct: 100 ALGCITPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNSSLIHAQSILATLACQVILM 159
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G VEGYR+ GGP GEGLDPLYPG AFDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFF
Sbjct: 160 GLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFF 219
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYAT 223
VQAIVTG+GPI NL H++DP NNAW YAT
Sbjct: 220 VQAIVTGQGPIANLDAHLSDPSGNNAWNYAT 250
>gi|159474480|ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
Length = 253
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 196/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+K+G KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+L
Sbjct: 96 GALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVIL 155
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 156 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 215
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 216 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|159474708|ref|XP_001695467.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158275950|gb|EDP01725.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 196/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+K+G KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+L
Sbjct: 97 GALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|359754897|gb|AEV59638.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 212
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 189/206 (91%), Gaps = 4/206 (1%)
Query: 1 MRRTVKS----APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++ + + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 7 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 66
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+
Sbjct: 67 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLV 126
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 127 HAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 186
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGP 202
ELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 187 ELKNGRLAMFSMFGFFVQAIVTGKGP 212
>gi|2407314|gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 193/218 (88%), Gaps = 1/218 (0%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGPDR K+LGPFS+ TPSYLTGEFPGDYGWDTAGLSADPETFA RELE+IH+RWAMLG
Sbjct: 34 FYGPDRAKWLGPFSDDTPSYLTGEFPGDYGWDTAGLSADPETFASYRELELIHARWAMLG 93
Query: 73 ALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
ALGCV PE+LSK GV+FGEAVWFKAGAQIF++GGLDYLGN +L+HAQSILAI CQVVL
Sbjct: 94 ALGCVTPELLSKYAGVEFGEAVWFKAGAQIFADGGLDYLGNSSLVHAQSILAILGCQVVL 153
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG E +R+ GGPLGE LD L+PGGAFDPLGLADDPD F+ELKVKE+KNGRLAMFSMFGF
Sbjct: 154 MGGAEAFRVNGGPLGEDLDKLHPGGAFDPLGLADDPDTFSELKVKEIKNGRLAMFSMFGF 213
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FVQAIVTGKGP+EN +HIADP +N + YAT FVPG
Sbjct: 214 FVQAIVTGKGPVENWAEHIADPSGSNGFVYATKFVPGN 251
>gi|145079335|tpg|DAA05910.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Acetabularia acetabulum]
Length = 244
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/229 (76%), Positives = 196/229 (85%), Gaps = 4/229 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R V++A + WYGPDR K+LGPFSE PSYLTG+FPGDYGWDTAGLSADPETF R
Sbjct: 17 VRNIVRNAVE--WYGPDRAKWLGPFSEGDVPSYLTGQFPGDYGWDTAGLSADPETFKAYR 74
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
E E+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 75 EQELIHARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHA 134
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAI CQVVLMG +E YR+ GGPLGEGLD L+PG FDPLGLADDPD FAELKVKE+
Sbjct: 135 QSILAILGCQVVLMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEI 194
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGF+VQAIVTGKGPIEN +H+ADP + NAW YAT FVP
Sbjct: 195 KNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|115827|sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii]
gi|167409|gb|AAA33082.1| chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 194/216 (89%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC PE+L+K+G KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+L
Sbjct: 96 GALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVIL 155
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLA FSMFGF
Sbjct: 156 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGF 215
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 216 FVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>gi|169061|gb|AAA33655.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 194
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/194 (87%), Positives = 184/194 (94%)
Query: 36 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 95
EFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWF
Sbjct: 1 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWF 60
Query: 96 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPG 155
KAG+QIFSEGGLDYLGNP+L+HAQSIL +WA QV+LMG VEGYRI GGPLGE +DPLYPG
Sbjct: 61 KAGSQIFSEGGLDYLGNPSLVHAQSILTVWATQVILMGAVEGYRIAGGPLGEVVDPLYPG 120
Query: 156 GAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVA 215
G+FDPLGLA+ P+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV
Sbjct: 121 GSFDPLGLAEIPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVN 180
Query: 216 NNAWAYATNFVPGK 229
NNAWAYATNF PGK
Sbjct: 181 NNAWAYATNFAPGK 194
>gi|4139216|gb|AAD03731.1| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
Length = 254
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 195/216 (90%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+K+G KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+L
Sbjct: 97 GALGCLTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATLAVQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNG LAMFSMFGF
Sbjct: 157 MGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGALAMFSMFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGP++NL DH+A+P NNA+A+AT F P
Sbjct: 217 FVQAIVTGKGPVQNLDDHLANPGVNNAFAFATKFTP 252
>gi|115826|sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein [Chlamydomonas moewusii]
Length = 256
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/230 (76%), Positives = 194/230 (84%), Gaps = 5/230 (2%)
Query: 3 RTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
+ K+AP WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPETF K
Sbjct: 25 KQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKY 84
Query: 59 RELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RELEVIH+RWA+LGALG + PE+LS GVKFGE VWFKAGAQIFSEGGLDYLG+P LIH
Sbjct: 85 RELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIH 144
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQ+I+A A QVVLMG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE
Sbjct: 145 AQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKE 204
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+KNGRLAMFS FGFFVQAIVTGKGPI+NL DH+ADP NNA+A AT F P
Sbjct: 205 IKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
>gi|145079356|tpg|DAA05911.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Acetabularia acetabulum]
Length = 244
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 176/229 (76%), Positives = 195/229 (85%), Gaps = 4/229 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R ++A + WYGPDR K+LGPFSE PSYLTGEFPGDYGWDTAGLSADPETF R
Sbjct: 17 VRNIARNAVE--WYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYR 74
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
E E+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 75 EQELIHARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHA 134
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAI CQVVLMG +E YR+ GGPLGEGLD L+PG FDPLGLADDPD FAELKVKE+
Sbjct: 135 QSILAILGCQVVLMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLADDPDTFAELKVKEI 194
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGF+VQAIVTGKGPIEN +H+ADP + NAW YAT FVP
Sbjct: 195 KNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|195616522|gb|ACG30091.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 241
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 179/233 (76%), Positives = 190/233 (81%), Gaps = 27/233 (11%)
Query: 1 MRRTV----KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T +A S WYG DR YLGP S Q PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTAGKPKPAASGSPWYGADRVLYLGPLSGQPPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LI
Sbjct: 92 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLI 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI ADDP+ FAELKVK
Sbjct: 152 HAQSILAIWACQVVLMGAVEGYRI-----------------------ADDPEAFAELKVK 188
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 189 EIKNGRLAMFSMFGFFVQAIVTGKGPVENLADHLADPVNNNAWAYATNFVPGK 241
>gi|145079118|tpg|DAA05899.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm9 [Acetabularia acetabulum]
Length = 229
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 176/229 (76%), Positives = 194/229 (84%), Gaps = 4/229 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R ++A + WYGPDRPK+LGPFSE PSYLTGEFPGDYGWDTAGLSADPETF R
Sbjct: 2 VRNVSRNAIE--WYGPDRPKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYR 59
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
E E+IH+RWAMLGALGCV PEIL+K GV GE+VWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 60 EQELIHARWAMLGALGCVTPEILAKYAGVSCGESVWFKAGSQIFQEGGLDYLGNPSLVHA 119
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAI CQVVLMG +E YR+ GGPLGEGLDPL+PG FDPLGLADDPD FAELKVKE+
Sbjct: 120 QSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTFAELKVKEI 179
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGF+VQAIVTGKGPIEN DH+ADP AW YAT FVP
Sbjct: 180 KNGRLAMFSMFGFYVQAIVTGKGPIENWADHVADPFNVTAWNYATKFVP 228
>gi|168053612|ref|XP_001779229.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669328|gb|EDQ55917.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/230 (77%), Positives = 196/230 (85%), Gaps = 4/230 (1%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R KS+ S+WYGPDRP +LGPFS TPSYL GEFPGDYGWDTAGLSADPE+FA+NR LE
Sbjct: 38 RGSKSSSGSMWYGPDRPLFLGPFSGNTPSYLKGEFPGDYGWDTAGLSADPESFARNRALE 97
Query: 63 VIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
+IH RWAMLGALGC+ PE+L K + V E VWFKAGAQIFS+GGLDYLGNPNLIHAQSI
Sbjct: 98 LIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDGGLDYLGNPNLIHAQSI 157
Query: 122 LAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELK 179
LA+WA QVVLMG VE YR G P +GEG D LYPGG FDPLGLADDP+ AELKVKELK
Sbjct: 158 LAVWAVQVVLMGAVEAYRTNGLPGVGEGGD-LYPGGKYFDPLGLADDPETLAELKVKELK 216
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
NGRLAMFSMFGFFVQAIVTGKGP+ENL DH+A+PV+NNAWA+ATNF PG
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLLDHLANPVSNNAWAFATNFTPGN 266
>gi|12582|emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
Length = 193
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/193 (89%), Positives = 185/193 (95%), Gaps = 1/193 (0%)
Query: 38 PGDYGWDTA-GLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFK 96
PGDYGWDT+ GLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFK
Sbjct: 1 PGDYGWDTSRGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 60
Query: 97 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGG 156
AGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG
Sbjct: 61 AGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGG 120
Query: 157 AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAN 216
+FDPLGLA+DP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV N
Sbjct: 121 SFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 180
Query: 217 NAWAYATNFVPGK 229
NAWAYATNFVPGK
Sbjct: 181 NAWAYATNFVPGK 193
>gi|357122389|ref|XP_003562898.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Brachypodium distachyon]
Length = 267
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 193/226 (85%), Gaps = 4/226 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
S +WYGPDR KYLGPFS QTPSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Sbjct: 43 SMSNELWYGPDRVKYLGPFSAQTPSYLSGEFPGDYGWDTAGLSADPEAFARNRALEVIHG 102
Query: 67 RWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIW 125
RWAMLGALGCVFPE+L K GV+F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+
Sbjct: 103 RWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVL 162
Query: 126 ACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRL 183
QV+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRL
Sbjct: 163 GSQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRL 221
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFFVQAIVTGKGP+ENL+DH+ DPVANNAW +AT F PG
Sbjct: 222 AMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 267
>gi|326511319|dbj|BAJ87673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/208 (83%), Positives = 184/208 (88%), Gaps = 4/208 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 34 MRKTAVKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+
Sbjct: 94 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLV 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 154 HAQSILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVK 213
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
E+KNGRLAMFSMFGFFVQAIVTG P
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGGEPCR 241
>gi|156890564|gb|ABU96692.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/223 (79%), Positives = 189/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 46 NDLWYGPDRLKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 105
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 106 MLGALGCITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 165
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 166 VILMGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DHI +PVANNAW YAT F PG
Sbjct: 225 SMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFAPGS 267
>gi|359495476|ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
gi|147801944|emb|CAN77327.1| hypothetical protein VITISV_001096 [Vitis vinifera]
Length = 269
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 48 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 107
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 108 MLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 167
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 168 VVLMGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMF 226
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAWAYAT FVPG
Sbjct: 227 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 269
>gi|115794|sp|P27489.1|CB23_SOLLC RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type III CAB-13; Flags: Precursor
gi|19277|emb|CAA42818.1| LHCII type III [Solanum lycopersicum]
Length = 265
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 190/222 (85%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+FPE+L K V F E VWFKAG+QIFS+GGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|224117282|ref|XP_002317529.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222860594|gb|EEE98141.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 42 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 101
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 102 MLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 161
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 162 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMF 220
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 221 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
>gi|384253340|gb|EIE26815.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 168/215 (78%), Positives = 192/215 (89%), Gaps = 1/215 (0%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGP+R YLGPF+ ++PSYL GE+PGDYGWDTAGLSADPETFA+ RE+EVIH+RWAMLG
Sbjct: 36 FYGPNRAGYLGPFT-KSPSYLNGEYPGDYGWDTAGLSADPETFARYREIEVIHARWAMLG 94
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGCV PE+L+KNGV FGEAVW+KAG+QIF+ GGLDYLGNP+LIHAQSI+AI QV+LM
Sbjct: 95 ALGCVTPELLAKNGVSFGEAVWWKAGSQIFAPGGLDYLGNPSLIHAQSIIAIVFSQVLLM 154
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G +EGYR+ GGP GEGLD LYPG AFDPLGLADDPD FAEL+VKE+KNGRLAMFSMFGFF
Sbjct: 155 GLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFAELRVKEIKNGRLAMFSMFGFF 214
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
VQAIVTGKGPIENL DH+A+P NN +A AT FVP
Sbjct: 215 VQAIVTGKGPIENLADHLANPSVNNGFAAATKFVP 249
>gi|359495474|ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 269
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 48 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 107
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 108 MLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 167
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 168 VVLMGLVEGYRINGLPGVGEGND-LYPGGPYFDPLGLADDPVTFAELKVKEIKNGRLAMF 226
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAWAYAT FVPG
Sbjct: 227 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 269
>gi|224122902|ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222871777|gb|EEF08908.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 42 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 101
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 102 MLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 161
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 162 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFAELKVKEIKNGRLAMF 220
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 221 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 263
>gi|115793|sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,
chloroplastic; Short=CAB; Flags: Precursor
gi|19023|emb|CAA44881.1| type III LHCII CAB precursor protein [Hordeum vulgare]
Length = 268
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 191/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 47 NDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGCVFPE+L K GV+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 107 MLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 167 VLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL+DH+ DPVANNAW +AT F PG
Sbjct: 226 SMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPGS 268
>gi|20671|emb|CAA49149.1| chlorophyll a/b-binding protein [Pisum sativum]
gi|141448064|gb|ABO87611.1| chloroplast chlorophyll-a/b binding protein [Pisum sativum]
Length = 265
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 190/222 (85%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
+VLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 IVLMGLVEGFRINGLPDVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|160713965|gb|ABX47018.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Bambusa
oldhamii]
Length = 267
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/223 (79%), Positives = 189/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 46 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 105
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 106 MLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 165
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 166 VILMGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 225 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|159474706|ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19423287|gb|AAL88457.1|AF479778_1 major light-harvesting complex II protein m9 [Chlamydomonas
reinhardtii]
gi|158275949|gb|EDP01724.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 193/216 (89%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALG V PE+L KNGV+FGEAVWFKAGAQIF EGGL+YLGNP+LIHAQ+I+A A QVVL
Sbjct: 97 GALGIVTPELLQKNGVQFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLAVQVVL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
+G VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFS FGF
Sbjct: 157 LGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSSFGF 216
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPI+NL DH+++P NNA+A+AT + P
Sbjct: 217 FVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 252
>gi|125558806|gb|EAZ04342.1| hypothetical protein OsI_26482 [Oryza sativa Indica Group]
Length = 266
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/223 (79%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+ +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 45 KELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 104
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFS+GGLDYLGNPNL+HAQSILA+ Q
Sbjct: 105 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQ 164
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEGYRI G P +G+G D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 165 VVLMGLVEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 223
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW YAT F PG
Sbjct: 224 SMFGFFVQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPGS 266
>gi|145079437|tpg|DAA05915.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Acetabularia acetabulum]
Length = 244
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/229 (75%), Positives = 193/229 (84%), Gaps = 4/229 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R ++A + WYGPDR K+LGPF E PSYLTGEFPGDYGWDTAGLSADPETF R
Sbjct: 17 VRNIARNAVE--WYGPDRAKWLGPFFEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYR 74
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
E E+IH+RWAMLGALGCV PEILSK GV GE+VWFKAG+QIF EGGLDYLGNP+L+HA
Sbjct: 75 EQELIHARWAMLGALGCVTPEILSKYAGVSLGESVWFKAGSQIFQEGGLDYLGNPSLVHA 134
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAI CQVVLMG +E YR+ GGPLG+GLD L+PG FDPLGLADDPD FAELKVKE+
Sbjct: 135 QSILAILGCQVVLMGLIEAYRVNGGPLGKGLDVLHPGEKFDPLGLADDPDTFAELKVKEI 194
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
KNGRLAMFSMFGF+VQAIVTGKGPIEN +H+ADP + NAW YAT FVP
Sbjct: 195 KNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVNAWNYATKFVP 243
>gi|115472785|ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|34393384|dbj|BAC83393.1| putative chlorophyll A-B binding protein of LHCII type III,
chloroplast precursor (CAB) [Oryza sativa Japonica
Group]
gi|113611527|dbj|BAF21905.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|125600722|gb|EAZ40298.1| hypothetical protein OsJ_24743 [Oryza sativa Japonica Group]
gi|215678934|dbj|BAG96364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679381|dbj|BAG96521.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692555|dbj|BAG87975.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737394|dbj|BAG96323.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737576|dbj|BAG96706.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737599|dbj|BAG96729.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767446|dbj|BAG99674.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767453|dbj|BAG99681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 266
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/223 (79%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+ +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 45 KELWYGPDRVKYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 104
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFS+GGLDYLGNPNL+HAQSILA+ Q
Sbjct: 105 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVHAQSILAVLGFQ 164
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEGYRI G P +G+G D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 165 VVLMGLVEGYRINGLPGVGDGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 223
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW YAT F PG
Sbjct: 224 SMFGFFVQAIVTGKGPLENLLDHLADPVANNAWVYATKFTPGS 266
>gi|56809383|gb|AAW31513.1| light-harvesting chlorophyll-a/b binding protein Lhcb3 [Pisum
sativum]
Length = 265
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 190/222 (85%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
+VLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 IVLMGLVEGFRINGLPDVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>gi|118489712|gb|ABK96657.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 224
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 3 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 62
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 63 MLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 122
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 123 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMF 181
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 182 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 224
>gi|87313205|gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 188/221 (85%), Gaps = 4/221 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+LGPFSE TP+YLTGEF GDYGWDTAGLSADP+TFAK RE+EVIH+RWAML
Sbjct: 29 WYGPDRPKFLGPFSEGDTPAYLTGEFAGDYGWDTAGLSADPQTFAKYREIEVIHARWAML 88
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGC+ PE+L+KNGV FGEAVWFKAGAQIF +GGL+YLGN NL+HAQSILA A QV+L
Sbjct: 89 GALGCITPELLAKNGVPFGEAVWFKAGAQIFQDGGLNYLGNENLVHAQSILATLAVQVLL 148
Query: 132 MGFVEGYRIGGGP---LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
MG E YR GG GE LD LYPGGAFDPLGLADDPD AELKVKE+KNGRLAMFSM
Sbjct: 149 MGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLGLADDPDTLAELKVKEIKNGRLAMFSM 208
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FGFFVQAIVTG+GPI NL H++DP NNAW YAT FVPG
Sbjct: 209 FGFFVQAIVTGQGPIANLDAHLSDPSGNNAWNYATKFVPGN 249
>gi|169124051|gb|ACA47401.1| chloroplast chlorophyll-a/b binding protein [Medicago falcata]
Length = 266
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/223 (79%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 45 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 104
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 105 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 164
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 165 VVLMGLVEGFRINGLPGVGEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 223
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DHI +PVANNAW YAT FVPG
Sbjct: 224 SMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 266
>gi|357452427|ref|XP_003596490.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355485538|gb|AES66741.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 264
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/223 (79%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 43 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 102
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 103 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 162
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 163 VVLMGLVEGFRINGLPGVGEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 221
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DHI +PVANNAW YAT FVPG
Sbjct: 222 SMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 264
>gi|116792703|gb|ABK26463.1| unknown [Picea sitchensis]
Length = 251
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 171/228 (75%), Positives = 187/228 (82%), Gaps = 27/228 (11%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 51 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 110
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 170
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
LAI ACQV+LMG +EGYR+ GGPLGE VKELKNG
Sbjct: 171 LAILACQVILMGAIEGYRVAGGPLGE---------------------------VKELKNG 203
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
RLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 204 RLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 251
>gi|87313231|gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein LhcbM8
[Chlamydomonas incerta]
Length = 245
Score = 348 bits (893), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/216 (77%), Positives = 193/216 (89%), Gaps = 1/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 28 FYGPNRAKWLGPYSENSTPAYLTGEFPGDYGWDTAGLSADPETFQRYRELELIHARWAML 87
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALG V PE+L+KNGV FGEAVWFKAGAQIF EGGL+YLGNP+LIHAQ+I+A A QV+L
Sbjct: 88 GALGIVTPELLAKNGVPFGEAVWFKAGAQIFQEGGLNYLGNPSLIHAQNIVATLAVQVIL 147
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
+G VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFS FGF
Sbjct: 148 LGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSSFGF 207
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPI+NL DH+++P NNA+A+AT + P
Sbjct: 208 FVQAIVTGKGPIQNLDDHLSNPGVNNAFAFATKYTP 243
>gi|242045970|ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 47 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 107 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 167 VILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Sbjct: 226 SMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 268
>gi|312281753|dbj|BAJ33742.1| unnamed protein product [Thellungiella halophila]
Length = 265
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 190/222 (85%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGAFGCITPEVLQKWVRVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DHI DPVANNAWA+AT FVPG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHIDDPVANNAWAFATKFVPG 264
>gi|160713967|gb|ABX47019.1| chloroplast chlorophyll a/b binding protein cab-BO3-1 [Bambusa
oldhamii]
Length = 267
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEF GDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 46 NDLWYGPDRVKYLGPFSAQTPSYLTGEFAGDYGWDTAGLSADPEAFARNRALEVIHGRWA 105
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 106 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 165
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAEL+VKE+KNGRLAMF
Sbjct: 166 VILMGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELRVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 225 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|163914163|dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/202 (85%), Positives = 183/202 (90%), Gaps = 4/202 (1%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T A S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 33 MRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+
Sbjct: 93 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLV 152
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAIWA QV+LMG VEGYRIGGGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVK
Sbjct: 153 HAQSILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 212
Query: 177 ELKNGRLAMFSMFGFFVQAIVT 198
E+KNGRLAMFSMFGFFVQAIVT
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVT 234
>gi|156890566|gb|ABU96693.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 187/223 (83%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 46 NDLWYGPDRLKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 105
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 106 MLGALGCITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 165
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 166 VILMGLVEGYRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMF FFVQAIVTGKG +ENL DHI +PVANNAW YAT F PG
Sbjct: 225 SMFRFFVQAIVTGKGSLENLLDHIDNPVANNAWVYATKFAPGS 267
>gi|414887113|tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays]
gi|414887114|tpg|DAA63128.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 2
[Zea mays]
Length = 269
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 48 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 107
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 108 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 167
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 168 VILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 226
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Sbjct: 227 SMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 269
>gi|225461315|ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 266
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 45 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 104
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E +WFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 105 MLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 164
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +G+G + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 165 VVLMGLVEGFRINGLPGVGDG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 223
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 224 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 266
>gi|255569585|ref|XP_002525758.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223534908|gb|EEF36594.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 268
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 47 NELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 106
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 107 MLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 167 VVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 226 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS 268
>gi|388520661|gb|AFK48392.1| unknown [Lotus japonicus]
Length = 270
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 189/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 49 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 108
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 109 MLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 168
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G P +GEG + LYPG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 169 VLLMGLVEGFRINGLPGVGEG-NNLYPGDQYFDPLGLADDPATFAELKVKEIKNGRLAMF 227
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT FVPG
Sbjct: 228 SMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFVPGS 270
>gi|671737|emb|CAA52749.1| Chloropyll a/b binding protein [Amaranthus hypochondriacus]
Length = 186
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/186 (89%), Positives = 178/186 (95%)
Query: 44 DTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFS 103
DTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS
Sbjct: 1 DTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFS 60
Query: 104 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGL 163
EGGLDYLGNP+LIHAQSILAIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGL
Sbjct: 61 EGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 120
Query: 164 ADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYAT 223
ADDPD FAELKVKE+KNG LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYAT
Sbjct: 121 ADDPDAFAELKVKEIKNGMLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 180
Query: 224 NFVPGK 229
NFVPGK
Sbjct: 181 NFVPGK 186
>gi|307106008|gb|EFN54255.1| hypothetical protein CHLNCDRAFT_56227 [Chlorella variabilis]
Length = 248
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 186/221 (84%), Gaps = 2/221 (0%)
Query: 2 RRTVKSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R T + S+ WYGP+RP++LGPFS TPSYL GE+PGDYGWDTAGLSADPETFA+ RE
Sbjct: 17 RATRQVTRASVEWYGPNRPQFLGPFSGSTPSYLKGEYPGDYGWDTAGLSADPETFARYRE 76
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
LEVIH+RWAMLGALGCV PE+L NGV FGEAVWFKAGAQIF EGGLDYLGNP+LIHAQ
Sbjct: 77 LEVIHARWAMLGALGCVTPELLQNNGVASFGEAVWFKAGAQIFQEGGLDYLGNPSLIHAQ 136
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SI+A+ Q+ LMG +EGYR+ GGP GEGLD LYPG AFDPLGLADDPD F+ELKVKELK
Sbjct: 137 SIVAVLLTQLTLMGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFSELKVKELK 196
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
NGRLAM SMFGFFVQ IVT KGPIENL DH+A P A N WA
Sbjct: 197 NGRLAMVSMFGFFVQGIVTKKGPIENLNDHLASPDATNFWA 237
>gi|374434016|gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/226 (76%), Positives = 188/226 (83%), Gaps = 4/226 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
+ +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Sbjct: 40 TMSNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHG 99
Query: 67 RWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIW 125
RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+
Sbjct: 100 RWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVL 159
Query: 126 ACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRL 183
QV+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRL
Sbjct: 160 GFQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRL 218
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFF+QAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Sbjct: 219 AMFSMFGFFIQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 264
>gi|226509520|ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195613464|gb|ACG28562.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195639878|gb|ACG39407.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
Length = 272
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 51 NDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 110
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 111 MLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 170
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 171 VILMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 229
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Sbjct: 230 SMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 272
>gi|3928891|gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R +V++A + WYGPDR K+LGP+S+ PSYLTGEFPGDYGWDTAGLSADPETF K RE
Sbjct: 24 RVSVQAAVE--WYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKYRE 81
Query: 61 LEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
E+IH+RWAMLGALGCV PEIL+K G FGE+VWF+AGAQIF +GGLDYLG+P LIHAQ
Sbjct: 82 TELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALIHAQ 141
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SI AI QV+LMG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELK+KE+K
Sbjct: 142 SIGAIVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIK 201
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
NGRLAMFSMFGF+VQAIVTGKGP+EN +HIADP NA++YAT F P
Sbjct: 202 NGRLAMFSMFGFYVQAIVTGKGPVENWAEHIADPFTANAFSYATKFTP 249
>gi|359806176|ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
gi|255635333|gb|ACU18020.1| unknown [Glycine max]
Length = 267
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 187/223 (83%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 46 NDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 105
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 106 MLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 165
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 166 VILMGLVEGYRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 225 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 267
>gi|359807444|ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
gi|255646132|gb|ACU23552.1| unknown [Glycine max]
Length = 268
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/223 (78%), Positives = 187/223 (83%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 47 NDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 106
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 107 MLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 166
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEGYRI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 167 VILMGLVEGYRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 226 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFSPGS 268
>gi|159484394|ref|XP_001700243.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158272559|gb|EDO98358.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 266
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/210 (79%), Positives = 184/210 (87%), Gaps = 5/210 (2%)
Query: 2 RRTVK-----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTVK S P S WYGP+RP +LG F+ + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 25 RRTVKPASKASTPDSFWYGPERPLFLGAFTGEPPSYLTGEFPGDYGWDTAGLSADPETFK 84
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ RELE+IH+RWAMLGALGC+FPE+L GV FGEAVWFKAGAQIF EGGLDYLGNPNL+
Sbjct: 85 RYRELELIHARWAMLGALGCIFPELLGSYGVPFGEAVWFKAGAQIFQEGGLDYLGNPNLV 144
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
HAQSILAI QV+LMG +EGYR+ GGPLGEGLD LYPGG+FDPLGLADDPD FAELKVK
Sbjct: 145 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E+KNGRLAMFSMFGFFVQAIVTGKGP++NL
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNL 234
>gi|145079419|tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 168/228 (73%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R +V++A + WYGPDR K+LGP+S+ PSYLTGEFPGDYGWDTAGLSADPETF K RE
Sbjct: 21 RVSVQAAVE--WYGPDRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKYRE 78
Query: 61 LEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
E+IH+RWAMLGALGCV PEIL+K G FGE+VWF+AGAQIF +GGLDYLG+P LIHAQ
Sbjct: 79 TELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALIHAQ 138
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SI AI QV+LMG +EGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELK+KE+K
Sbjct: 139 SIGAIVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIKEIK 198
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
NGRLAMFSMFGF+VQAIVTGKGP+EN +H+ADP NA++YAT F P
Sbjct: 199 NGRLAMFSMFGFYVQAIVTGKGPVENWAEHVADPFTANAFSYATKFTP 246
>gi|4689380|gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 176/226 (77%), Positives = 188/226 (83%), Gaps = 4/226 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
S +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH
Sbjct: 45 SMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG 104
Query: 67 RWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIW 125
RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+
Sbjct: 105 RWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVL 164
Query: 126 ACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRL 183
QVVLMG VEG+RI G +GEG + LYPGG FDPLGLADDP FAELKVKE+KNGRL
Sbjct: 165 GFQVVLMGLVEGFRINGLDGVGEG-NNLYPGGQYFDPLGLADDPATFAELKVKEIKNGRL 223
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Sbjct: 224 AMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 269
>gi|302143082|emb|CBI20377.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 345 bits (885), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 190/223 (85%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 10 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 69
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E +WFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 70 MLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 129
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +G+G + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 130 VVLMGLVEGFRINGLPGVGDG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 188
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 189 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 231
>gi|6644196|gb|AAF20948.1|AF207690_1 chlorophyll a/b-binding protein [Daucus carota]
Length = 264
Score = 345 bits (885), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 177/238 (74%), Positives = 191/238 (80%), Gaps = 10/238 (4%)
Query: 1 MRRTVKSAP------QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 54
+R V P +WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 28 LRDVVSMGPGKFTMGSDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEA 87
Query: 55 FAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP 113
FAKNR LEVIH RWAMLGA GC+ PE+L K V F E VWFKAG+QIF+EGGLDYLGNP
Sbjct: 88 FAKNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGSQIFTEGGLDYLGNP 147
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFA 171
NL+HAQSILA+ QVVLMG VE +RI G P +GEG D LYPGG FDPLGLADDP A
Sbjct: 148 NLVHAQSILAVLGFQVVLMGLVESFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTLA 206
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 264
>gi|104763696|gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agave tequilana]
Length = 186
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 166/185 (89%), Positives = 177/185 (95%)
Query: 45 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 104
TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSE
Sbjct: 2 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 61
Query: 105 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLA 164
GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLA
Sbjct: 62 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 121
Query: 165 DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
DDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATN
Sbjct: 122 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATN 181
Query: 225 FVPGK 229
FVPGK
Sbjct: 182 FVPGK 186
>gi|15239602|ref|NP_200238.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3 protein [Arabidopsis thaliana]
gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|9759500|dbj|BAB10750.1| Lhcb3 chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|332009094|gb|AED96477.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
Length = 265
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 188/222 (84%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAWA+AT F PG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
>gi|297792877|ref|XP_002864323.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297310158|gb|EFH40582.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 265
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 188/222 (84%), Gaps = 4/222 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 164 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 222
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAWA+AT F PG
Sbjct: 223 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 264
>gi|357497757|ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
gi|355494182|gb|AES75385.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
Length = 229
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/226 (75%), Positives = 185/226 (81%), Gaps = 20/226 (8%)
Query: 4 TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 63
T K + S WYGPDR KYLGPF + PSYLTGEFPGDYGW+TAGLSADPETFAKNRELEV
Sbjct: 24 TKKVSSGSPWYGPDRVKYLGPFFGEAPSYLTGEFPGDYGWNTAGLSADPETFAKNRELEV 83
Query: 64 IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA 123
IHSRWAM WFKA +QIFSEGGLDYLGNP+L+HAQSILA
Sbjct: 84 IHSRWAMFDR--------------------WFKARSQIFSEGGLDYLGNPSLVHAQSILA 123
Query: 124 IWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRL 183
IWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ F ELKVKE+KNGRL
Sbjct: 124 IWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVELKVKEIKNGRL 183
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFV GK
Sbjct: 184 AMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVLGK 229
>gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 191/227 (84%), Gaps = 4/227 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R+ ++A + +YGPDR +LGPF++ TPSYL GEFPGDYGWDTAGLSADPETFA+ RE+
Sbjct: 27 RQVTRAAIE--FYGPDRATFLGPFTD-TPSYLNGEFPGDYGWDTAGLSADPETFARYREI 83
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH+RWAMLGALGCV PE+L+KNGV FGEAVWFKAGAQIF GL+YLGN +L+HAQSI
Sbjct: 84 EVIHARWAMLGALGCVTPELLAKNGVSFGEAVWFKAGAQIFGSDGLNYLGNSSLVHAQSI 143
Query: 122 LAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
+A ACQV+LMG E YR G GP EGLD LYPGG FDPLGLADDPD F+ELKVKE+KN
Sbjct: 144 IATLACQVILMGGAEAYRAAGEGPGLEGLDSLYPGGPFDPLGLADDPDTFSELKVKEIKN 203
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADP NN +A AT F P
Sbjct: 204 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 250
>gi|449463148|ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
gi|449532805|ref|XP_004173369.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
Length = 264
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/226 (77%), Positives = 188/226 (83%), Gaps = 4/226 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
+ +WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH
Sbjct: 40 TMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHG 99
Query: 67 RWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIW 125
RWAMLGALGC+ PE+L K V F E VWFKAG+QIF+EGGLDYLGNPNL+HAQSILA+
Sbjct: 100 RWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVL 159
Query: 126 ACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRL 183
QVVLMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRL
Sbjct: 160 GFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRL 218
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AMFSMFGFFVQAIVTGKGP+ENL DH+ DPVANNAW YAT F PG
Sbjct: 219 AMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS 264
>gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 185/216 (85%), Gaps = 2/216 (0%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGPDR +LGPF+E +PSYL GEFPGDYGWDTAGLSADPETFA+ RE+EVIH+RWAMLG
Sbjct: 31 FYGPDRAGFLGPFTE-SPSYLKGEFPGDYGWDTAGLSADPETFARYREIEVIHARWAMLG 89
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGCV PE+L+KNGV FGEAVWFKAGAQIF GL+YLGNP+L+HAQSI+A ACQV+LM
Sbjct: 90 ALGCVTPELLAKNGVSFGEAVWFKAGAQIFGSDGLNYLGNPSLVHAQSIIATLACQVILM 149
Query: 133 GFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
G E YR G GP EGLD LYPGG FDPLGLADDPD FAELK KE+KNGRLAMFSMFGF
Sbjct: 150 GGAEAYRANGEGPGVEGLDSLYPGGPFDPLGLADDPDTFAELKTKEIKNGRLAMFSMFGF 209
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+ADP NN +A AT F P
Sbjct: 210 FVQAIVTGKGPIENLSDHLADPGVNNGFAAATKFAP 245
>gi|371721828|gb|AEX55237.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Allium
sativum]
Length = 261
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/223 (77%), Positives = 187/223 (83%), Gaps = 4/223 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 40 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 99
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAGAQIFS+GGLDYLGNPNL+HAQSILA+ Q
Sbjct: 100 MLGALGCITPEVLQKWVNVNFKEPVWFKAGAQIFSQGGLDYLGNPNLVHAQSILAVLGFQ 159
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +G G D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 160 VLLMGAVEGFRINGLDGVGNGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 218
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+EN DH+ +PVANNAW YAT FVPG
Sbjct: 219 SMFGFFVQAIVTGKGPLENWLDHLDNPVANNAWVYATKFVPGS 261
>gi|19423289|gb|AAL88458.1|AF479779_1 major light-harvesting complex II protein m7 [Chlamydomonas
reinhardtii]
Length = 258
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 164/222 (73%), Positives = 192/222 (86%), Gaps = 2/222 (0%)
Query: 8 APQSIWYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
AP +YGP+R K+LGP+SE TP+Y +FPGDYGWDTAGLSADPETF + RELE+IH+
Sbjct: 35 APGIEFYGPNRAKWLGPYSENATPAYRLAKFPGDYGWDTAGLSADPETFKRYRELELIHA 94
Query: 67 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-W 125
RWAMLGALGC+ PE+L+K+G +FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I
Sbjct: 95 RWAMLGALGCITPELLAKSGTQFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIRRHPG 154
Query: 126 ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAM 185
+V+LMG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAM
Sbjct: 155 RFKVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAM 214
Query: 186 FSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FSMFGFFVQAIVTGKGPI+NL DH+++P NNA+A+AT F P
Sbjct: 215 FSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNNAFAFATKFTP 256
>gi|405617|emb|CAA43804.1| LHCII Type III chlorophyll a/b binding protein [Brassica napus]
Length = 221
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%), Gaps = 4/221 (1%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
+WYGPDR KYLGPFS QTPSYLTGEFPG+YGWDTAGLSADPE FAKNR LEVIH RWAM
Sbjct: 1 DLWYGPDRVKYLGPFSVQTPSYLTGEFPGEYGWDTAGLSADPEAFAKNRALEVIHGRWAM 60
Query: 71 LGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LGA GC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QV
Sbjct: 61 LGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV 120
Query: 130 VLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFS 187
+LMG VEG RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFS
Sbjct: 121 ILMGLVEGLRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFS 179
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
MFGFFVQAIVTGKGP+ENL DH+ +PVANNAWA+AT FVPG
Sbjct: 180 MFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFVPG 220
>gi|87313181|gb|ABD37887.1| light-harvesting chlorophyll-a/b binding protein LhcbM3 [Mesostigma
viride]
gi|87313183|gb|ABD37888.1| light-harvesting chlorophyll-a/b binding protein LhcbM5 [Mesostigma
viride]
gi|87313185|gb|ABD37889.1| light-harvesting chlorophyll-a/b binding protein LhcbM4 [Mesostigma
viride]
gi|145079700|tpg|DAA05924.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Mesostigma viride]
gi|145079723|tpg|DAA05925.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Mesostigma viride]
gi|145079757|tpg|DAA05931.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Mesostigma viride]
Length = 267
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/224 (70%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RRT + P S +YGPDR +LGPF++ PSYLTGE+PGDYGWDT GLSADPETFA RE+
Sbjct: 34 RRTKSATPDSPFYGPDRVTFLGPFTD-VPSYLTGEYPGDYGWDTVGLSADPETFAAYREI 92
Query: 62 EVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E++H+RWAMLG LGC PE L K +G+ FGE+VWFKAG QIF EGGLDYLGNP+L+HAQS
Sbjct: 93 ELMHARWAMLGTLGCFLPEALEKYSGINFGESVWFKAGGQIFQEGGLDYLGNPSLVHAQS 152
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
I+A Q +LMG VEGYR+GGGPLGE D +YPGG+FDPLGL DDPD AELKVKE+KN
Sbjct: 153 IIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEIKN 212
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
GRLAMFSMFG+F+QAIVTGKGP+ENL H+ADP NN +AYAT+
Sbjct: 213 GRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPFVNNGFAYATS 256
>gi|87313177|gb|ABD37885.1| light-harvesting chlorophyll-a/b binding protein LhcbM1 [Mesostigma
viride]
gi|87313179|gb|ABD37886.1| light-harvesting chlorophyll-a/b binding protein LhcbM2 [Mesostigma
viride]
gi|145079623|tpg|DAA05921.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Mesostigma viride]
Length = 267
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/224 (70%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RRT + P S +YGPDR +LGPF++ PSYLTGE+PGDYGWDT GLSADPETFA RE+
Sbjct: 34 RRTKSATPDSPFYGPDRVTFLGPFTD-VPSYLTGEYPGDYGWDTVGLSADPETFAAYREI 92
Query: 62 EVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E++H+RWAMLG LGC PE L K +G+ FGE+VWFKAG QIF EGGLDYLGNP+L+HAQS
Sbjct: 93 ELMHARWAMLGTLGCFLPEALEKYSGINFGESVWFKAGGQIFQEGGLDYLGNPSLVHAQS 152
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
I+A Q +LMG VEGYR+GGGPLGE D +YPGG+FDPLGL DDPD AELKVKE+KN
Sbjct: 153 IIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGLGDDPDTLAELKVKEIKN 212
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
GRLAMFSMFG+F+QAIVTGKGP+ENL H+ADP NN +AYAT+
Sbjct: 213 GRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPFVNNGFAYATS 256
>gi|302584050|gb|ADL57411.1| chloroplast LHCII type I chlorophyll a-b binding precursor protein
[Ipomoea nil]
Length = 179
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/179 (91%), Positives = 171/179 (95%)
Query: 51 DPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL 110
D ETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGLDYL
Sbjct: 1 DTETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLDYL 60
Query: 111 GNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQF 170
GNP+LIHAQSILAIWACQVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ F
Sbjct: 61 GNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPLYPGGSFDPLGLADDPEAF 120
Query: 171 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 121 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 179
>gi|145079271|tpg|DAA05907.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Acetabularia acetabulum]
Length = 219
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/212 (77%), Positives = 182/212 (85%), Gaps = 2/212 (0%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGP+S+ PSYL GEFPGDYGWDTAGLSADPETF RE E+IH+RWAML
Sbjct: 8 WYGPDRALWLGPYSDGAVPSYLKGEFPGDYGWDTAGLSADPETFKAYREQELIHARWAML 67
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGNP+L+HAQSILAI CQVV
Sbjct: 68 GALGCVTPEILSKYAGVSFGESVWFKAGSQIFQEGGLDYLGNPSLVHAQSILAILGCQVV 127
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG +E YR+ GGPLGEGLD L+PG +FDPLGLADDPD FAELK+KE+KNGRLAMFSMFG
Sbjct: 128 LMGLIEAYRVNGGPLGEGLDTLHPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFG 187
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
F+VQAIVTGKGPIEN DH+ADP AW YA
Sbjct: 188 FYVQAIVTGKGPIENWADHVADPFNVTAWNYA 219
>gi|307106007|gb|EFN54254.1| hypothetical protein CHLNCDRAFT_59709 [Chlorella variabilis]
Length = 243
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 184/219 (84%), Gaps = 3/219 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R+ +++ + +YGPDR K+LGPFS TPSYL GE+PGDYGWDTAGLSADPETF++ REL
Sbjct: 19 RQVTRASAE--FYGPDRVKFLGPFSGATPSYLKGEYPGDYGWDTAGLSADPETFSRYREL 76
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
EVIH+RWAMLGALGCV PE+L KNG FGEAVWFKAGAQIF +GGLDYLGN NL+HAQS
Sbjct: 77 EVIHARWAMLGALGCVTPELLQKNGAANFGEAVWFKAGAQIFQDGGLDYLGNANLVHAQS 136
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
I+A+ Q+VLMG +EGYR+ GGP GE DP+YPG AFDPLGLADDPD AELKVKE+KN
Sbjct: 137 IVAVLLTQIVLMGLIEGYRVNGGPAGEITDPIYPGEAFDPLGLADDPDTLAELKVKEIKN 196
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAW 219
GRLAM SMFGFF+QAIVTGKGPIENL DH+A P N W
Sbjct: 197 GRLAMVSMFGFFIQAIVTGKGPIENLNDHLAAPGETNFW 235
>gi|302854015|ref|XP_002958519.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
gi|300256166|gb|EFJ40439.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
Length = 270
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S +YGP+R +LGP S PSYLTGEFPGDYGWD+AGLS+DPETF + RELE+IH+RWAM
Sbjct: 51 SQFYGPERALWLGPLSGSAPSYLTGEFPGDYGWDSAGLSSDPETFKRYRELELIHARWAM 110
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCV PE+L+KNG E VWFKAGAQIF EGGLDYLGNP L+HAQSILA ACQV+
Sbjct: 111 LGALGCVTPELLAKNGTPIAEPVWFKAGAQIFQEGGLDYLGNPGLVHAQSILATLACQVI 170
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
LMG +EG+R+ GGP GEGLD L+PGG FDPL LA+DPD FAELKVKE+KNGRLAMFSMF
Sbjct: 171 LMGAIEGFRVNGGPAGEGLDKLHPGGPWFDPLALAEDPDAFAELKVKEIKNGRLAMFSMF 230
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
GFFVQAIVTG+GPIENL H+A+P NNA+A+AT F P
Sbjct: 231 GFFVQAIVTGQGPIENLESHLANPGVNNAFAFATKFTP 268
>gi|123316054|gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
gi|123316062|gb|ABM74387.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
Length = 261
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 169/233 (72%), Positives = 189/233 (81%), Gaps = 7/233 (3%)
Query: 2 RRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
RRTVK S P S WYGPDRP +LG S + PSYLTGEFPGDYGWDTAG SADP TFA+
Sbjct: 27 RRTVKPSKGSTPDSAWYGPDRPLFLGSLSGEPPSYLTGEFPGDYGWDTAGFSADPTTFAR 86
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFG--EAVWFKAGAQIFSEGGLDYLGNPNL 115
R +EVIH+RWA+LGALG V PEIL++NGV F A+WFKAG++IF EGGL+YLGNPNL
Sbjct: 87 YRTIEVIHARWALLGALGIVTPEILAQNGVPFSGDAAIWFKAGSEIFKEGGLNYLGNPNL 146
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELK 174
IHAQSILA A QV++MG EG+R G P EGLD LYPGG FDPLGLADDPD FAELK
Sbjct: 147 IHAQSILATLAVQVIVMGAAEGFRANGEAPGVEGLDTLYPGGPFDPLGLADDPDTFAELK 206
Query: 175 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
VKE+KNGRLAMF+ FGFFVQAIVTGKGPI+NL DH+ADP NNA+A AT FVP
Sbjct: 207 VKEIKNGRLAMFACFGFFVQAIVTGKGPIQNLEDHLADPGVNNAFASATKFVP 259
>gi|145079190|tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm11 [Acetabularia acetabulum]
Length = 224
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 161/202 (79%), Positives = 178/202 (88%), Gaps = 3/202 (1%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRT K SAP ++WYGPDRP++LGPFS PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 23 MRRTQKKSSAPDNVWYGPDRPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPETFRRY 82
Query: 59 RELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RE E+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGN NL+H
Sbjct: 83 REQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSNLVH 142
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAI CQV+LMG +E YR+ GGPLGEGLDPLYPG FDPLGLADDPD FAELK+KE
Sbjct: 143 AQSILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIKE 202
Query: 178 LKNGRLAMFSMFGFFVQAIVTG 199
+KNGRLAMFSMFGF+VQA+VTG
Sbjct: 203 IKNGRLAMFSMFGFYVQAVVTG 224
>gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/241 (70%), Positives = 193/241 (80%), Gaps = 14/241 (5%)
Query: 2 RRTVKSAPQSI----------WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSA 50
RRTV S+P+S WYGPDRPK+LGP+S+ TPSYL GE+PGDYGWDTAGLSA
Sbjct: 15 RRTV-SSPKSKGKQVTRASIEWYGPDRPKFLGPYSDGATPSYLKGEYPGDYGWDTAGLSA 73
Query: 51 DPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDY 109
DPETF++ RE+EVIHSRWA+LG LG V PE+L K GVKF EAVWFKAGAQIFS GL+Y
Sbjct: 74 DPETFSRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQIFSADGLNY 133
Query: 110 LGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQ 169
LGNP+L+HAQSI+A A QV+L+G EGYR+ GGP GE DPLYPGGAFDPLGLADDPD
Sbjct: 134 LGNPSLVHAQSIIATVATQVILLGLAEGYRVNGGPAGEITDPLYPGGAFDPLGLADDPDT 193
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAY-ATNFVPG 228
FAELKVKE+KNGRLA F+ GFFVQAIVTGKGPI+NL DH+ADP A N + A FVPG
Sbjct: 194 FAELKVKEIKNGRLAQFAALGFFVQAIVTGKGPIQNLEDHLADPFAVNGFTIGAQKFVPG 253
Query: 229 K 229
Sbjct: 254 N 254
>gi|159478875|ref|XP_001697526.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19749357|gb|AAD03732.2| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158274405|gb|EDP00188.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 268
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/218 (73%), Positives = 184/218 (84%), Gaps = 1/218 (0%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S +YGPDR +LGP S TP+YLTGEFPGDYGWD+AGLSADPETF + RELE+IH+RWAM
Sbjct: 50 SAFYGPDRGLWLGPLSGTTPAYLTGEFPGDYGWDSAGLSADPETFKRYRELELIHARWAM 109
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGC+ PE+L+KNG E VWFKAGAQIF+EGGLDYLGNP L+HAQSILA A QV+
Sbjct: 110 LGALGCITPELLAKNGTPIVEPVWFKAGAQIFAEGGLDYLGNPGLVHAQSILATLAVQVI 169
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
LMG +EGYR+ GGP GEGLD L+PGG FDPLGLA+DPD FAELKVKE+KNGRLAMFSMF
Sbjct: 170 LMGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMF 229
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
GFFVQAIVTGKGP+ NL +H+A P +NA+ YA F P
Sbjct: 230 GFFVQAIVTGKGPLANLDEHLASPFTSNAFTYAQKFTP 267
>gi|8925554|gb|AAF81518.1|AF268320_1 light-harvesting complex protein LHCG11 [Bigelowiella natans]
gi|145078995|tpg|DAA05892.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Bigelowiella natans]
Length = 333
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 179/219 (81%), Gaps = 4/219 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGPFSE PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH+RWAML
Sbjct: 115 WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNTFAAYRETEVIHARWAML 174
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGCV PE+L+K +GV E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILAI ACQV+
Sbjct: 175 GALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAILACQVI 234
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGP GEGLD + PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSM G
Sbjct: 235 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 294
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
F+VQAI TGKGP+EN +HIADP N AT F P
Sbjct: 295 FYVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 333
>gi|32307464|gb|AAP79137.1| chlorophyll a/b-binding protein II 1 [Bigelowiella natans]
Length = 346
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 179/219 (81%), Gaps = 4/219 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGPFSE PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH+RWAML
Sbjct: 128 WYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPTTFAAYRETEVIHARWAML 187
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
G LGCV PE+L+K +GV E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILAI ACQV+
Sbjct: 188 GTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAILACQVI 247
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGP GEGLD + PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSM G
Sbjct: 248 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 307
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANN--AWAYATNFVP 227
F+VQAI TGKGP+EN +HIADP N A AT F P
Sbjct: 308 FYVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 346
>gi|8925556|gb|AAF81519.1|AF268321_1 light-harvesting complex protein LHCG12 [Bigelowiella natans]
gi|145079012|tpg|DAA05893.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Bigelowiella natans]
Length = 346
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 179/219 (81%), Gaps = 4/219 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGPFSE PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH+RWAML
Sbjct: 128 WYGPDRALWLGPFSEGSVPSYLTGEFPGDYGWDTQGLSADPNTFAAYRETEVIHARWAML 187
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGCV PE+L+K +GV E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILAI ACQV+
Sbjct: 188 GALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAILACQVI 247
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGP GEGLD + PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSM G
Sbjct: 248 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 307
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
F+VQAI TGKGP+EN +HIADP N AT F P
Sbjct: 308 FYVQAIATGKGPVENWAEHIADPAGVNGLTNGIATKFTP 346
>gi|8925552|gb|AAF81517.1|AF268319_1 light-harvesting complex protein LHCG4 [Bigelowiella natans]
gi|145078979|tpg|DAA05891.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Bigelowiella natans]
Length = 345
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 179/219 (81%), Gaps = 4/219 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGPFSE PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH+RWAML
Sbjct: 127 WYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPTTFAAYRETEVIHARWAML 186
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
G LGCV PE+L+K +GV E VWFKAG+QIF+EGGLDYLGNP+L+HAQSILAI ACQV+
Sbjct: 187 GTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAILACQVI 246
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGP GEGLD + PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSM G
Sbjct: 247 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 306
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANN--AWAYATNFVP 227
F+VQAI TGKGP+EN +HIADP N A AT F P
Sbjct: 307 FYVQAISTGKGPVENWAEHIADPSGVNGLTLATATKFTP 345
>gi|87313207|gb|ABD37900.1| light-harvesting chlorophyll-a/b binding protein LhcbM3
[Acutodesmus obliquus]
Length = 248
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 165/221 (74%), Positives = 185/221 (83%), Gaps = 5/221 (2%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGPDR K+LGPF+ ++ YLTGEFPGDYGWDTAGLSADP+TF++ RE+EVIH+RWAMLG
Sbjct: 29 FYGPDRAKFLGPFTPES-DYLTGEFPGDYGWDTAGLSADPQTFSRYREVEVIHARWAMLG 87
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGC+ PE+L+KNGV FGEAVWFKAGAQIF +GGL+YLGN NL+HAQSILA A QV+LM
Sbjct: 88 ALGCITPELLAKNGVPFGEAVWFKAGAQIFQDGGLNYLGNENLVHAQSILATLAVQVILM 147
Query: 133 GFVEGYRIGGGP---LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
G E YR GG GE LD LYPGG FDPLGLADDPD AELKVKELKNGRLAMFSM
Sbjct: 148 GAAEAYRANGGAPGGFGEDLDSLYPGGKFFDPLGLADDPDTLAELKVKELKNGRLAMFSM 207
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FGFFVQAIVTG+GPI NL H+ADP NNAW +AT FVPG
Sbjct: 208 FGFFVQAIVTGQGPIANLDAHLADPSGNNAWNFATKFVPGN 248
>gi|157965837|gb|ABW06955.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 613
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
+ T S + WYGP+R K+LGPFSE TPSYLTGEFPGDYGWDTAGL+ADP TFAK RE
Sbjct: 128 KSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAADPITFAKYRE 187
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWAMLGALG VFPE L+K GV E VWFKAGAQIFSEGGLDYLGN NL+HAQS
Sbjct: 188 AELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQS 247
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 248 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 307
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
GRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 308 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 356
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
+ T S + WYGP+R K+LGPFSE TPSYLTGEFPGDYGWDTAGL+ADP TFAK RE
Sbjct: 368 KSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAADPITFAKYRE 427
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWAMLGALG VFPE L+K GV E VWFKAGAQIFSEGGLDYLGN NL+HAQS
Sbjct: 428 AELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQS 487
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 488 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 547
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
GRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 548 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 596
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 92/116 (79%), Gaps = 2/116 (1%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
NL+HAQSILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAEL
Sbjct: 1 NLVHAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
KVKELKNGRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 61 KVKELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 116
>gi|115777|sp|P12332.2|CB21_SILPR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169886|gb|AAB42157.1| chlorophyl-a/b-binding protein precursor, partial [Silene latifolia
subsp. alba]
Length = 205
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 156/170 (91%), Positives = 165/170 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 36 MRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 95
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPE+L+KNGVKFGEAVWFKAG+QIF EGGLDYLGNPNL+HAQS
Sbjct: 96 LEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQS 155
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQF 170
ILAIWACQVVLMG VEGYR+GGGPLGEGLD LYPGGAFDPLGLA+DP+ F
Sbjct: 156 ILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
>gi|145079288|tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm10 [Acetabularia acetabulum]
Length = 224
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/202 (79%), Positives = 178/202 (88%), Gaps = 3/202 (1%)
Query: 1 MRRTVK--SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MRRT K SAP S+WYGP+RP++LGPFS PSYLTGEFPGDYGWDTAGLSADPETF +
Sbjct: 23 MRRTQKKSSAPDSVWYGPERPQFLGPFSGDCPSYLTGEFPGDYGWDTAGLSADPETFRRY 82
Query: 59 RELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
RE E+IH+RWAMLGALGCV PEIL+K GV FGE+VWFKAG+QIF EGGLDYLGN +L+H
Sbjct: 83 REQELIHARWAMLGALGCVTPEILAKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSSLVH 142
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQ ILAI CQV+LMG +E YR+ GGPLGEGLDPLYPGG FDPLGLADDPD FAELKVKE
Sbjct: 143 AQYILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGGQFDPLGLADDPDTFAELKVKE 202
Query: 178 LKNGRLAMFSMFGFFVQAIVTG 199
+KNGRLAMFSMFGF+VQA+VTG
Sbjct: 203 IKNGRLAMFSMFGFYVQALVTG 224
>gi|145078830|tpg|DAA05886.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Euglena gracilis]
Length = 825
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
+ T S + WYGP+R K+LGPFSE TPSYLTGEFPGDYGWDTAGL+ADP TFAK RE
Sbjct: 351 KSTPASDKLAAWYGPNRNKWLGPFSENSTPSYLTGEFPGDYGWDTAGLAADPITFAKYRE 410
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWAMLGALG VFPE L+K GV E VWFKAGAQIFSEGGLDYLGN NL+HAQS
Sbjct: 411 AELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQS 470
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 471 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 530
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
GRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 531 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 579
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
+ T S + WYGP+R K+LGPFSE TPSYLTGEFPGDYGWDTAGL+ADP TFAK RE
Sbjct: 591 KSTPASDKLAAWYGPNRNKWLGPFSENSTPSYLTGEFPGDYGWDTAGLAADPITFAKYRE 650
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWAMLGALG VFPE L+K GV E VWFKAGAQIFSEGGLDYLGN NL+HAQS
Sbjct: 651 AELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQS 710
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 711 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 770
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
GRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 771 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 819
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
+ T S + WYGP+R K+LGPFSE TPSYLTGEFPGDYGWDTAGL+ADP TFAK RE
Sbjct: 111 KSTPASDKLAAWYGPNRNKWLGPFSEGSTPSYLTGEFPGDYGWDTAGLAADPITFAKYRE 170
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWAMLGALG VFPE L+K GV E VWFKAGAQIFSEGGLDYLGN NL+HAQS
Sbjct: 171 AELIHARWAMLGALGVVFPEALAKAGVPLAEPVWFKAGAQIFSEGGLDYLGNSNLVHAQS 230
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAI A QVVLMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKN
Sbjct: 231 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 290
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
GRLAMF+MFGF+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 291 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 339
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGPLGE D LYPGGAFDPLGLADDP+ FAELKVKELKNGRLAMF+MFG
Sbjct: 1 LMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFG 60
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWA--YATNFVP 227
F+VQA+VTG+GP+EN H+ADP N Y T F P
Sbjct: 61 FYVQALVTGEGPVENWAAHVADPFNVNGLTAVYVTQFAP 99
>gi|193875800|gb|ACF24536.1| light harvesting complex protein LHCII-1 [Gymnochlora stellata]
Length = 335
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 175/207 (84%), Gaps = 2/207 (0%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDR +LGPFSE PSYLTGEFPGDYGWDT GLSADP TFA RE EVIH+RWAML
Sbjct: 112 WYGPDRALWLGPFSEGAVPSYLTGEFPGDYGWDTQGLSADPTTFAAYRETEVIHARWAML 171
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGCV PE+LSK +GV E VWFKAG+QIF+EGGLDYLGNP+LIHAQSILAI ACQVV
Sbjct: 172 GALGCVTPELLSKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLIHAQSILAILACQVV 231
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG E YR+ GGP GEGLD + PGGAFDPLGLADDPD FAELKVKE+KNGRLAMFSM G
Sbjct: 232 LMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVKEIKNGRLAMFSMLG 291
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANN 217
F+VQAI TGKGP+EN +HIADP N
Sbjct: 292 FYVQAIATGKGPVENWAEHIADPSGVN 318
>gi|90191869|gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
gi|90191873|gb|ABD91648.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 329 bits (843), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 185/220 (84%), Gaps = 4/220 (1%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGPDR K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH+RWA+L
Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALG + PE+LS+ GV+FGE VWFKAGAQIF++GGL+YLGN +LIHAQSI+A A QVV
Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVV 152
Query: 131 LMGFVEGYRIGGGPLG--EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
LMG E YR GG G + LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAMFS
Sbjct: 153 LMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSC 212
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
GFFVQAIVTGKGP++NL DH+ADP NNA+A AT F PG
Sbjct: 213 LGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|145079253|tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm8 [Acetabularia acetabulum]
Length = 220
Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/205 (79%), Positives = 177/205 (86%), Gaps = 4/205 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R ++A + WYGPDR K+LGPFSE PSYLTGEFPGDYGWDTAGLSADPETF R
Sbjct: 18 IRNVSRNAVE--WYGPDRAKWLGPFSEGDVPSYLTGEFPGDYGWDTAGLSADPETFKAYR 75
Query: 60 ELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
E E+IH+RWAMLGALGCV PEILSK GV FGE+VWFKAG+QIF EGGLDYLGN NLIHA
Sbjct: 76 EQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSNLIHA 135
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAI CQVVLMG +E YR+ GGPLGEGLDPL+PG FDPLGLADDPD FAELKVKE+
Sbjct: 136 QSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLADDPDTFAELKVKEI 195
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPI 203
KNGRLAMFSMFGF+VQAIVTGKGPI
Sbjct: 196 KNGRLAMFSMFGFYVQAIVTGKGPI 220
>gi|90191871|gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
gi|90191875|gb|ABD91649.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 184/220 (83%), Gaps = 4/220 (1%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGPDR K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH+RWA+L
Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALG + PE+LS+ GV+FGE VWFKAGAQIF+ GGL+YLGN +LIHAQSI+A A QVV
Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFAAGGLNYLGNESLIHAQSIIATLAVQVV 152
Query: 131 LMGFVEGYRIGGGPLG--EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
LMG E YR GG G + LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAMFS
Sbjct: 153 LMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSC 212
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
GFFVQAIVTGKGP++NL DH+ADP NNA+A AT F PG
Sbjct: 213 LGFFVQAIVTGKGPVQNLTDHLADPTVNNAFASATKFTPG 252
>gi|115829|sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein [Dunaliella tertiolecta]
Length = 253
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 184/220 (83%), Gaps = 4/220 (1%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGPDR K+LGPFSE TP YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH+RWA+L
Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92
Query: 72 GALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALG + PE+LS+ GV+FGE VWFKAGAQIF++GGL+YLGN +LIHAQSI+A A QVV
Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVV 152
Query: 131 LMGFVEGYRIGGGPLG--EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
LMG E YR GG G + LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAMFS
Sbjct: 153 LMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSC 212
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
GFFVQAIVTGKGP++NL DH+ADP N A+A AT F PG
Sbjct: 213 LGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>gi|115831|sp|P15773.1|CB2_MALDO RecName: Full=Chlorophyll a-b binding protein AB10, chloroplastic;
AltName: Full=LHCII type I CAB-AB10; Short=LHCP; Flags:
Precursor
gi|19541|emb|CAA35690.1| unnamed protein product [Malus x domestica]
Length = 268
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
Query: 18 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 77
R KYLGPFS + PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIHSR AM ALGC+
Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117
Query: 78 FPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
FPE+LS G FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIW +V+LMG VEG
Sbjct: 118 FPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEG 177
Query: 138 YRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV 197
YRI GPLGE DPLYP G+FD LGLA+D + FAELKVKELKNGRLAMFSMFGFFVQAIV
Sbjct: 178 YRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIV 236
Query: 198 TGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
+ K +ENL DH+ V NNA + TNFVPG
Sbjct: 237 SRKDRLENLADHLGWTVNNNALSNVTNFVPGN 268
>gi|454250|emb|CAA82853.1| light-harvesting chlorophyll a/b binding protein [Trifolium repens]
Length = 167
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/167 (95%), Positives = 163/167 (97%)
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIHSRWAMLGALGC FPEIL KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL
Sbjct: 1 VIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 60
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
AIWA QVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPD FAELKVKELKNGR
Sbjct: 61 AIWATQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNGR 120
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LAMFSMFGFFVQAIVTGKGP++NLYDH+ADPVANNAWAYATNFVPG+
Sbjct: 121 LAMFSMFGFFVQAIVTGKGPVQNLYDHLADPVANNAWAYATNFVPGQ 167
>gi|18254|emb|CAA49209.1| a/b binding protein [Pyrobotrys stellata]
Length = 254
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/227 (69%), Positives = 186/227 (81%), Gaps = 3/227 (1%)
Query: 2 RRTV--KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
RRT K+ P+S +YGP+RP +LG S + P+YL GEFPGDYGWDTAGLSADPETF + R
Sbjct: 27 RRTQAKKAVPESPFYGPNRPLFLGGLSGEPPAYLNGEFPGDYGWDTAGLSADPETFKRYR 86
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKF-GEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
+LE+IH+RWA+LGALGCV PE+L++NGV + VWFK GA+IF EGGL+YLGN NL+HA
Sbjct: 87 QLELIHARWALLGALGCVVPELLARNGVAMPADGVWFKVGAEIFKEGGLNYLGNENLVHA 146
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSI+A Q+VLMG+ EGYRI GGPLGEGLDPLYPGGAFDPLGLADDPD AELKVKEL
Sbjct: 147 QSIVATLLVQLVLMGWAEGYRINGGPLGEGLDPLYPGGAFDPLGLADDPDTLAELKVKEL 206
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KNGR+AM +MFGF VQAIVT KGP+ENL DH+A P NN ++ A +
Sbjct: 207 KNGRMAMAAMFGFLVQAIVTQKGPLENLADHLAAPGTNNVFSNAATY 253
>gi|237510764|gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Ankistrodesmus convolutus]
Length = 248
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 181/220 (82%), Gaps = 5/220 (2%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+LGPFSE TP YLTGEFPGDYGWDTAGLSADP TFA+ RE+E+IH+RWAML
Sbjct: 28 WYGPDRPKFLGPFSEGDTPEYLTGEFPGDYGWDTAGLSADPATFARYREIELIHARWAML 87
Query: 72 GALGCVFPEILSKNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGCV PE+L+KNG + VWFKAGA IF++ GL+YLGNPNLIHAQSILA A QVV
Sbjct: 88 GALGCVVPELLAKNGTPLPDGGVWFKAGAAIFADDGLNYLGNPNLIHAQSILATLAFQVV 147
Query: 131 LMGFVEGYRIGGGPLG---EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFS 187
+MG E +R GG G EG D LYPG FDP+GLA+DPD FAELKVKE+KNGRLAMFS
Sbjct: 148 VMGAAESFRFNGGAPGGFLEGNDRLYPGDQFDPMGLAEDPDTFAELKVKEIKNGRLAMFS 207
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
MFGFFVQAIVTG+GPI NL H+ADP NNAWA AT FVP
Sbjct: 208 MFGFFVQAIVTGQGPIANLDAHLADPSVNNAWAAATKFVP 247
>gi|310696692|gb|ADP06401.1| putative chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 175
Score = 322 bits (825), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/175 (89%), Positives = 166/175 (94%)
Query: 21 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE 80
YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE
Sbjct: 1 YLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 60
Query: 81 ILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 140
+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI
Sbjct: 61 LLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 120
Query: 141 GGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQA 195
GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQA
Sbjct: 121 AGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQA 175
>gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precursor [Citrus limon]
Length = 216
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/183 (86%), Positives = 166/183 (90%), Gaps = 2/183 (1%)
Query: 1 MRRT-VKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T KS S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 34 MRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 93
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHA
Sbjct: 94 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHA 153
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
QSILAIWACQVVLMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP FAELKVKE+
Sbjct: 154 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPKAFAELKVKEI 213
Query: 179 KNG 181
KNG
Sbjct: 214 KNG 216
>gi|238858956|dbj|BAH70299.1| chlorophyll a/b binding protein [Vicia cinerea]
Length = 266
Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 176/222 (79%), Gaps = 6/222 (2%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR--- 67
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN L
Sbjct: 48 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNVSLRSSTPDGPC 107
Query: 68 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAC 127
W F + N VK FKAG+QIFSEGGLDYLGNP+L QSILAIWA
Sbjct: 108 WVPWDVSSQSFCPVTVLNSVKL---CGFKAGSQIFSEGGLDYLGNPSLGSRQSILAIWAT 164
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFS 187
QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAELKVKELKNGRLAMFS
Sbjct: 165 QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFS 224
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
MFGFFVQAIVTGKGP+ENL DH++DPV NNAW+YATNFVPGK
Sbjct: 225 MFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 266
>gi|225690798|gb|ACO06085.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 196
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/161 (93%), Positives = 157/161 (97%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNG+KFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSKNGIKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPL 161
ILAIWA QVVLMGF+EGYR+GGGPLGEGLD +YPGGA+ L
Sbjct: 155 ILAIWAVQVVLMGFIEGYRVGGGPLGEGLDIIYPGGAYTHL 195
>gi|307103850|gb|EFN52107.1| hypothetical protein CHLNCDRAFT_32733 [Chlorella variabilis]
Length = 255
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/225 (71%), Positives = 185/225 (82%), Gaps = 6/225 (2%)
Query: 7 SAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
S S+WYGPDRPK+LGPFS+ P+YLTGEFPGDYGWDT+GLSADPETF + R +EVIH
Sbjct: 30 SKSDSVWYGPDRPKFLGPFSDGLVPAYLTGEFPGDYGWDTSGLSADPETFKRFRTVEVIH 89
Query: 66 SRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
+RWAMLGALGC+FPE+L K +GV+FGEAVWFKAGAQIF++GGL+YLGNP L+HAQSI+A
Sbjct: 90 ARWAMLGALGCIFPEVLEKYSGVEFGEAVWFKAGAQIFADGGLNYLGNPGLVHAQSIVAT 149
Query: 125 WACQVVLMGFVEGYRIGG-GP--LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
QV+LMG VE YR G GP GEG D LYPGGAFDPLGLADDPD AELKVKELKNG
Sbjct: 150 LVVQVLLMGAVEIYRANGEGPSGFGEGQDNLYPGGAFDPLGLADDPDTLAELKVKELKNG 209
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA-YATNF 225
RLAM SM GFFVQAIVTGKGP++NL H+ +P N +A YA+
Sbjct: 210 RLAMMSMLGFFVQAIVTGKGPLDNLLTHLEEPGEFNFYANYASTL 254
>gi|157987283|gb|ABW07803.1| chlorophyll A-B binding protein [Solenostemon scutellarioides]
Length = 170
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/165 (93%), Positives = 161/165 (97%)
Query: 42 GWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQI 101
GWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QI
Sbjct: 1 GWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQI 60
Query: 102 FSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPL 161
FSEGGLDYLGNPNLIHAQSILAIWA QVVLMG +EGYR+GGGPLGEGLD +YPGG+FDPL
Sbjct: 61 FSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDKVYPGGSFDPL 120
Query: 162 GLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
GLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 121 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 165
>gi|307103588|gb|EFN51847.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/219 (72%), Positives = 180/219 (82%), Gaps = 4/219 (1%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+YGPDR K+LGPFS+ PSYL GEFPGDYGWD+AGLSADPETFA+ RE+EVIH+RWAML
Sbjct: 31 FYGPDRAKWLGPFSDGAVPSYLKGEFPGDYGWDSAGLSADPETFARYREIEVIHARWAML 90
Query: 72 GALGCVFPEILSKNGV-KFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
GALGC+ PE+L NG FGEA VWFKAGA IFS+ GL+YLGNP+LIHAQSI+A+ Q+
Sbjct: 91 GALGCLTPELLQNNGAADFGEAAVWFKAGASIFSDDGLNYLGNPSLIHAQSIVAVLLTQL 150
Query: 130 VLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+MG E YR G GP+ D LYPGGAFDPLGLADDPD AELKVKELKNGRLAMFSM
Sbjct: 151 VIMGAAEAYRYAGEGPVETSGDSLYPGGAFDPLGLADDPDTLAELKVKELKNGRLAMFSM 210
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FGFFVQA++TGK P+ENL DH+ADP N +A AT FVP
Sbjct: 211 FGFFVQALITGKSPLENLADHLADPSTANGFAVATKFVP 249
>gi|296085004|emb|CBI28419.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 165/229 (72%), Positives = 168/229 (73%), Gaps = 57/229 (24%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKS PQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 1 MRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIH RWAMLGALGCVFPEILSKNGVKFGEAV
Sbjct: 61 LEVIHCRWAMLGALGCVFPEILSKNGVKFGEAV--------------------------C 94
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILAIWACQVVLMGFVEGYR+ ELKVKE+KN
Sbjct: 95 ILAIWACQVVLMGFVEGYRV-------------------------------ELKVKEIKN 123
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPVANNAWAYATNFVPGK
Sbjct: 124 GRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANNAWAYATNFVPGK 172
>gi|302849997|ref|XP_002956527.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
gi|300258225|gb|EFJ42464.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
Length = 238
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 148/183 (80%), Positives = 167/183 (91%), Gaps = 1/183 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGCV P++LSKNGV+F EA+WFKAGAQIF EGGLDYLGN +L+HAQ+I+A ACQV+L
Sbjct: 97 GALGCVTPKLLSKNGVQFSEALWFKAGAQIFQEGGLDYLGNLSLVHAQNIVATLACQVIL 156
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 157 MGLVEGYRVNGGPAGEGLDPLYPGKSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 216
Query: 192 FVQ 194
FVQ
Sbjct: 217 FVQ 219
>gi|145079101|tpg|DAA05898.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Acetabularia acetabulum]
Length = 198
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/196 (76%), Positives = 170/196 (86%), Gaps = 1/196 (0%)
Query: 33 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGE 91
LTGEFPGDYGWDTAGLSADPETF K RE E+IH+RWAMLGALGCV PEIL++ G FGE
Sbjct: 1 LTGEFPGDYGWDTAGLSADPETFKKYRETELIHARWAMLGALGCVTPEILARYGGTSFGE 60
Query: 92 AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP 151
+VWF+AGAQIF +GGLDYLG+P LIHAQSI AI QV+LMG +EGYR+ GGP GEGLDP
Sbjct: 61 SVWFRAGAQIFKDGGLDYLGSPALIHAQSIGAIVISQVILMGLIEGYRVNGGPAGEGLDP 120
Query: 152 LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
LYPG +FDPLGLADDPD FAELK+KE+KNGRLAMFSMFGF+VQAIVTGKGP+EN +H+A
Sbjct: 121 LYPGESFDPLGLADDPDTFAELKIKEIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHVA 180
Query: 212 DPVANNAWAYATNFVP 227
DP NA++YAT F P
Sbjct: 181 DPFTANAFSYATKFTP 196
>gi|227206230|dbj|BAH57170.1| AT3G27690 [Arabidopsis thaliana]
Length = 160
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/160 (94%), Positives = 157/160 (98%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGC FPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQV
Sbjct: 1 MLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQV 60
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMGF+EGYRIGGGPLGEGLDPLYPGGAFDPL LA+DP+ F+ELKVKELKNGRLAMFSMF
Sbjct: 61 VLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMF 120
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGPIENL+DHIADPVANNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPIENLFDHIADPVANNAWAYATNFVPGK 160
>gi|12240089|gb|AAG49561.1| light-harvesting chlorophyll-binding protein [Citrus reticulata]
Length = 156
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/156 (98%), Positives = 154/156 (98%)
Query: 35 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVW 94
GEFPGDYGWDTAGLSADPETFAKNRE EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVW
Sbjct: 1 GEFPGDYGWDTAGLSADPETFAKNREPEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVW 60
Query: 95 FKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYP 154
FKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYP
Sbjct: 61 FKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYP 120
Query: 155 GGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
GGAFDPLGLAD PDQFAELKVKELKNGRLAMFSMFG
Sbjct: 121 GGAFDPLGLADGPDQFAELKVKELKNGRLAMFSMFG 156
>gi|193875804|gb|ACF24538.1| light harvesting complex protein LHCII-3 [Gymnochlora stellata]
Length = 300
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/223 (68%), Positives = 173/223 (77%), Gaps = 3/223 (1%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
VK+A WYG +RPKYLGPF TP+YLTGEFPGDYGWD+AGLSADP TF RE EVI
Sbjct: 81 VKAACNVEWYGENRPKYLGPFQSYTPAYLTGEFPGDYGWDSAGLSADPLTFKGYRETEVI 140
Query: 65 HSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
H+RWAMLGALGC+FPE+L+ G F VWFKAG IF E G+DYLGNPNL+HAQS LA+
Sbjct: 141 HARWAMLGALGCIFPELLNSAG--FNLPVWFKAGGTIF-ENGIDYLGNPNLVHAQSALAV 197
Query: 125 WACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLA 184
+ QVVLMG E YR GGPLGE D LYPGGAFDPLG A DP + AELKVKE+KNGRLA
Sbjct: 198 LSVQVVLMGASEAYRFNGGPLGEPADVLYPGGAFDPLGFAKDPSKAAELKVKEIKNGRLA 257
Query: 185 MFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
M +M G++VQA+ TGKGPIENL +H+ADP NN +A A F P
Sbjct: 258 MTAMLGYYVQALATGKGPIENLSEHLADPSKNNGFAVAGVFTP 300
>gi|115828|sp|P20865.1|CB2_DUNSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167987|gb|AAA33278.1| major chlorophyll binding protein [Dunaliella salina]
Length = 273
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/217 (71%), Positives = 178/217 (82%), Gaps = 3/217 (1%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGPD Q P TGEFPGDYGWDTAGLSADPETF + RELE+IH+R +LG
Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115
Query: 73 ALGCVFPEILS-KNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
ALG V PE+L+ ++G+KFG+A +WFKAGA IF +GGL+YLGNP+LIHAQ+I+A A QVV
Sbjct: 116 ALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVV 175
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYR+ GGP GEGLDPLYPG AFDPLGLADDPD FAELKVKE+KNGRLAMF+ G
Sbjct: 176 LMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FFVQAIVTGKGPIENL DH+A+P NNA+AYAT F P
Sbjct: 236 FFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
>gi|13265505|gb|AAG40044.2|AF324693_1 At2g34430 [Arabidopsis thaliana]
Length = 268
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/237 (68%), Positives = 184/237 (77%), Gaps = 11/237 (4%)
Query: 1 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ K + P S WYG DR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+N
Sbjct: 35 MRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLG----NPN 114
RELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVW + F++ +G P+
Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWVQG---WFTDLQRRRIGPTWATPS 151
Query: 115 LIHAQSILAIWACQVVLMG-FVEGYRI-GGGPLGEGLDPLYPGGAFDPLGLADDPDQFAE 172
L+HAQ + G + R+ G GPLGE D LYPGG+FDPLGLA DP+ FAE
Sbjct: 152 LVHAQEHFSHLGYSSYPHGSLLRATRVPGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAE 211
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
LKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 212 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 268
>gi|302144191|emb|CBI23318.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 167/221 (75%), Gaps = 28/221 (12%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 48 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 107
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 108 MLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 167
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVLMG VEGYRI G P LKVKE+KNGRLAMFSM
Sbjct: 168 VVLMGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSM 200
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FGFFVQAIVTGKGP+ENL DH+ +PVANNAWAYAT FVPG
Sbjct: 201 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 241
>gi|48375048|gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/199 (80%), Positives = 171/199 (85%), Gaps = 4/199 (2%)
Query: 33 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGE 91
LTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L K V F E
Sbjct: 1 LTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKE 60
Query: 92 AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP-LGEGLD 150
VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+RI G P +GEG +
Sbjct: 61 PVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEG-N 119
Query: 151 PLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 209
LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH
Sbjct: 120 NLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDH 179
Query: 210 IADPVANNAWAYATNFVPG 228
+ +PVANNAW YAT FVPG
Sbjct: 180 LDNPVANNAWVYATKFVPG 198
>gi|302144193|emb|CBI23320.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/221 (71%), Positives = 167/221 (75%), Gaps = 28/221 (12%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 43 NELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 102
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 103 MLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 162
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVLMG VEGYRI G P LKVKE+KNGRLAMFSM
Sbjct: 163 VVLMGLVEGYRINGLP---------------------------GLKVKEIKNGRLAMFSM 195
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FGFFVQAIVTGKGP+ENL DH+ +PVANNAWAYAT FVPG
Sbjct: 196 FGFFVQAIVTGKGPLENLLDHLDNPVANNAWAYATKFVPGS 236
>gi|384249593|gb|EIE23074.1| putative chlorophyll a/b-binding protein, chloroplast precursor
[Coccomyxa subellipsoidea C-169]
Length = 210
Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/206 (73%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
Query: 23 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEIL 82
GP S TPSYL GEFPGDYGWDTAGLSADPETFA+ RE+EVIH+RWAMLGALGC+ PE+L
Sbjct: 5 GPLSSATPSYLNGEFPGDYGWDTAGLSADPETFARYREIEVIHARWAMLGALGCLTPELL 64
Query: 83 SKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG 142
S+NG F E VW+KAGAQI S GLDYLG PNL+HAQSI+A A QV+LMG E YR G
Sbjct: 65 SQNGFTFQEPVWWKAGAQILSSEGLDYLGKPNLVHAQSIVATLAVQVILMGSAEAYRAAG 124
Query: 143 GPLG-EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G +GLD LYPGG FDPL A DPD AELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 125 SAPGVDGLDKLYPGGPFDPLEFASDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 184
Query: 202 PIENLYDHIADPVANNAWAYATNFVP 227
P+ENL DH+A P ANN +A AT FVP
Sbjct: 185 PLENLNDHLASPYANNGFAAATKFVP 210
>gi|190694831|gb|ACE88963.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 181
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/154 (95%), Positives = 151/154 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEF GDYGWDTAGLSADPETFA+NRE
Sbjct: 28 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFAGDYGWDTAGLSADPETFARNRE 87
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQS
Sbjct: 88 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 147
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYP 154
ILAIWA QVVLMGFVEGYR+GGGPLGEGLD +YP
Sbjct: 148 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYP 181
>gi|307110329|gb|EFN58565.1| hypothetical protein CHLNCDRAFT_59584 [Chlorella variabilis]
Length = 249
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 13 WYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP RPK+LGP+S+ TPSYLTGEFPGDYGWDTAGLSADP+TFA+ RE+EVIH+RWAML
Sbjct: 38 WYGPSRPKFLGPYSDGATPSYLTGEFPGDYGWDTAGLSADPQTFARYREIEVIHARWAML 97
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
GALGCV PE+L WF AGA IFS+ GL YLG P LI+A+SI+A QV+L
Sbjct: 98 GALGCVVPELLDGTN----HIAWFNAGATIFSDDGLQYLGIPGLINAKSIVATLIVQVIL 153
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
M +VEGYR+ GGP G GLD +YPGG+FDPLGLADDPD F+ELKVKE+KNGRLAM SMFGF
Sbjct: 154 MSYVEGYRVNGGPAGTGLDAVYPGGSFDPLGLADDPDTFSELKVKEIKNGRLAMLSMFGF 213
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWA-YATNF 225
F+QAIVTG+GPIENL H+AD ANN ++ YA+
Sbjct: 214 FIQAIVTGEGPIENLNKHLADASANNFYSLYASTL 248
>gi|384250359|gb|EIE23838.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
C-169]
Length = 275
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 172/217 (79%), Gaps = 5/217 (2%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG DRP YLG F+ ++PSYL GEFPGDYGWDTAGLSADPETF++ RE+EVIH+RWAM
Sbjct: 64 SFWYGADRPGYLGAFT-RSPSYLNGEFPGDYGWDTAGLSADPETFSRYREIEVIHARWAM 122
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALG V PE+L + WF AGA IF G+ YLG P LI+A++I+A A QV+
Sbjct: 123 LGALGIVVPELLDQTN----HVAWFDAGATIFGPKGIQYLGVPGLINAKNIIATVAVQVI 178
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG +EGYR+ GGP GEGLD +YPG +FDPLGLADDPD FAELKVKE+KNGRLAMFS FG
Sbjct: 179 LMGAIEGYRVNGGPAGEGLDKVYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSNFG 238
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FFVQAIVTGKGPI NL DH+A+P NN +A AT F P
Sbjct: 239 FFVQAIVTGKGPIANLNDHLANPTVNNGFAAATKFTP 275
>gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 237
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/182 (81%), Positives = 164/182 (90%), Gaps = 6/182 (3%)
Query: 1 MRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+TV + P+++ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 20 MRKTV-AKPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 78
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L
Sbjct: 79 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL 138
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKV 175
+HAQSILAIWA QVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP FAELKV
Sbjct: 139 VHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPKAFAELKV 198
Query: 176 KE 177
E
Sbjct: 199 NE 200
>gi|87313203|gb|ABD37898.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Acutodesmus obliquus]
Length = 223
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 165/196 (84%), Gaps = 4/196 (2%)
Query: 2 RRTVK---SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
RRTVK SAP S+WYGPDRPKYLG S +TP+YLTGEF GDYGWDTAGLSADPETF +
Sbjct: 28 RRTVKGASSAPDSVWYGPDRPKYLGWLSGETPAYLTGEFAGDYGWDTAGLSADPETFKRY 87
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
RELE+IH+RWAMLGALGC+ PE+L+ NG E VWFKAGAQIF +GGL+YLGN NL+HA
Sbjct: 88 RELELIHARWAMLGALGCITPELLANNGTPIAEPVWFKAGAQIFQDGGLNYLGNENLVHA 147
Query: 119 QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKE 177
QSI+ QV+LMG VEGYR+ GGP GEGLD LYPGG FDPLGLADDPD FAELKVKE
Sbjct: 148 QSIIVTLLVQVILMGTVEGYRVNGGPAGEGLDKLYPGGDFFDPLGLADDPDTFAELKVKE 207
Query: 178 LKNGRLAMFSMFGFFV 193
+KNGRLAMFSMFGFFV
Sbjct: 208 IKNGRLAMFSMFGFFV 223
>gi|148908677|gb|ABR17446.1| unknown [Picea sitchensis]
Length = 160
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/160 (91%), Positives = 155/160 (96%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQV 60
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMG +EGYR+GGGPLGEGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMF
Sbjct: 61 VLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMF 120
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGPIENL+DH+ADP ANNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPIENLFDHLADPTANNAWAYATNFVPGK 160
>gi|307105157|gb|EFN53408.1| hypothetical protein CHLNCDRAFT_137219 [Chlorella variabilis]
Length = 258
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 180/231 (77%), Gaps = 5/231 (2%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R+ V A +YGPDR K+LGPFSE PSYL GEFPGDYGWDTAGLSADPETFA+ RE
Sbjct: 26 RKQVTRASVE-FYGPDRAKFLGPFSEGAVPSYLKGEFPGDYGWDTAGLSADPETFARYRE 84
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNG-VKFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHA 118
+E+IHSRWA+LGALG + PE L ++G V FGEA VWFKAGA IF + GL+YLGNP LIHA
Sbjct: 85 IELIHSRWALLGALGILTPEYLQRSGAVDFGEAAVWFKAGASIFGDDGLNYLGNPQLIHA 144
Query: 119 QSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
QSI+A Q+VL+G E YR G GP+ D LYPGG FDPLGL DDP+ AELKVKE
Sbjct: 145 QSIVATLLAQIVLVGTAEAYRYAGEGPVDTSGDKLYPGGFFDPLGLGDDPEALAELKVKE 204
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
+KNGRLA S+FGFFVQA+VTGKGP+ENL DH+ADP NN +AYA FVPG
Sbjct: 205 IKNGRLAQVSVFGFFVQALVTGKGPLENLDDHLADPWNNNGFAYAAKFVPG 255
>gi|405615|emb|CAA43803.1| LHC II Type III chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 176/221 (79%), Gaps = 6/221 (2%)
Query: 12 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-TFAKNRELEVIHSRWAM 70
+WYGPDR KYLGPFS QTPSY TGEFPGDYGWDTAGLSADPE FAKN LEVI+ RWAM
Sbjct: 46 LWYGPDRVKYLGPFSVQTPSYPTGEFPGDYGWDTAGLSADPEKAFAKNIALEVIYGRWAM 105
Query: 71 LGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LGA GC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QV
Sbjct: 106 LGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQV 165
Query: 130 VLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFS 187
+LMG VEG+RI +GEG D LYPGG FD L L DD F ELKVKE+KNG LAMFS
Sbjct: 166 ILMGLVEGFRINRFDGVGEGND-LYPGGKYFDLLSLVDDQVTFVELKVKEIKNGMLAMFS 224
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVAN-NAWAYATNFVP 227
MFGFFVQAIVTGK P+E+L DH+ + VAN NAWA+ T FVP
Sbjct: 225 MFGFFVQAIVTGKDPLESLLDHLDNFVANINAWAFTTKFVP 265
>gi|388504276|gb|AFK40204.1| unknown [Lotus japonicus]
Length = 202
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/171 (84%), Positives = 156/171 (91%), Gaps = 4/171 (2%)
Query: 1 MRRTV-KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T KS P S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 32 MRKTTTKSKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+
Sbjct: 92 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 151
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDP 167
HAQSILAIWA QV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP
Sbjct: 152 HAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDP 202
>gi|87313233|gb|ABD37912.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Chlamydomonas incerta]
Length = 232
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
+YGPDR +LGP S TP+YLTGEFPGDYGWD+AGLSADPETF + RELE+IH+RWAMLG
Sbjct: 46 FYGPDRGLWLGPLSGTTPAYLTGEFPGDYGWDSAGLSADPETFKRYRELELIHARWAMLG 105
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGCV PE+L+KNG E VWFKAGAQIF EGGLDYLGN LIHAQSILA A QV+LM
Sbjct: 106 ALGCVTPELLAKNGTPIAEPVWFKAGAQIFQEGGLDYLGNAGLIHAQSILATLAVQVILM 165
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
G +EGYR+ GGP GEGLD L+PGG FDPLGLA+DPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 166 GAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKVKEIKNGRLAMFSMFGF 225
Query: 192 FVQAIVT 198
FVQAIVT
Sbjct: 226 FVQAIVT 232
>gi|15637137|gb|AAL04435.1| chlorophyll a/b binding protein [Beta vulgaris]
Length = 168
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/161 (87%), Positives = 153/161 (95%)
Query: 40 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA 99
DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 60
Query: 100 QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFD 159
QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYR+ GGPLGE +DPLYPGG+FD
Sbjct: 61 QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFD 120
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
PLGLADDP+ FAELKVKE+KNGRLAM SMFGFFVQAIV K
Sbjct: 121 PLGLADDPEAFAELKVKEIKNGRLAMSSMFGFFVQAIVLVK 161
>gi|510388|emb|CAA43633.1| light harvesting chlorophyll a /b binding protein of PSII [Euglena
gracilis]
Length = 1055
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/230 (64%), Positives = 176/230 (76%), Gaps = 7/230 (3%)
Query: 3 RTVKSAPQS----IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
R K+AP+S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+
Sbjct: 120 RKAKAAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARY 179
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIH 117
RE EVIH+RWAMLGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIH
Sbjct: 180 REAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIH 239
Query: 118 AQSILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKV 175
AQS++ + + +MG VE YR GG G G LD LYPGG FDPLGLA+DPD AELKV
Sbjct: 240 AQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKV 299
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KELKNGRLAM +M GF+VQ +VT GP+ENL H+ADP ANN +++ + F
Sbjct: 300 KELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 349
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/223 (65%), Positives = 172/223 (77%), Gaps = 3/223 (1%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
KS S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE EVIH
Sbjct: 588 KSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREAEVIH 647
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
+RWAMLGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS++
Sbjct: 648 ARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLT 707
Query: 125 WACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
+ + +MG VE YR GG G G LD LYPGG FDPLGLA+DPD AELKVKELKNGR
Sbjct: 708 FLSTLAIMGAVEAYRYGGGVGDSGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGR 767
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
LAM +M GF+VQ +VT GP+ENL H+ADP ANN +++ + F
Sbjct: 768 LAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGF 810
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 162/221 (73%), Gaps = 3/221 (1%)
Query: 8 APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 67
+P + YGPDR K+LG F+ P YLTGE PGDYGWDTAGL ADP A+ R +VIH R
Sbjct: 832 SPLNKLYGPDRVKWLGGFTGFVPEYLTGELPGDYGWDTAGLGADPAKLARYRVAQVIHGR 891
Query: 68 WAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
WAMLG LGC FPE +++ GV FGE VWFKAGAQIFSE GL+YLG P LIHAQS++ +
Sbjct: 892 WAMLGVLGCWFPECINRWGGVPFGEPVWFKAGAQIFSEDGLNYLGQPGLIHAQSVVLTFL 951
Query: 127 CQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLA 184
+VLMG VE YR G G G LDPLYPGG FDPLGLADDP+ F ELKVKE+KNGRLA
Sbjct: 952 STLVLMGAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLELKVKEVKNGRLA 1011
Query: 185 MFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
M ++FGFFVQ I+TGKGP+EN DH+ DP NN + F
Sbjct: 1012 MVAIFGFFVQGILTGKGPVENWVDHLTDPFVNNIFQLTPGF 1052
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+A S WYGP+RPK+LGP S P YL GE+ GDYG+DTAGL+ADP+ F + R+ E+ +
Sbjct: 353 AATGSKWYGPNRPKWLGPLSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQN 412
Query: 66 SRWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
RWAMLG LGC+ PE+LS GV + E VWFK GA I + G +DYL NP LIHA ++L
Sbjct: 413 GRWAMLGVLGCLAPEVLSNVFGVPYPEPVWFKTGATILNGGSIDYLANPKLIHASNLLLT 472
Query: 125 WACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRL 183
++V E +R G GPLG+ D YPGG FDPLGL+ DP FAE KVKE+KNGRL
Sbjct: 473 LVLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRL 532
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
AM +M G FVQA VTG+ P+ENL H+A+P N +YA
Sbjct: 533 AMLAMLGLFVQAGVTGQSPLENLSAHLANPGVNFWTSYA 571
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
IHAQS++ + +VLMG VE YR G G G LDPLYPGG FDPLGLADDP+ F EL
Sbjct: 1 IHAQSVVLTFLSTLVLMGAVEAYRSAGSVGDFGADLDPLYPGGPFDPLGLADDPEAFLEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KVKE+KNGRLAM ++FGF VQ I+TGKGP+EN DH+ DP NN + + F
Sbjct: 61 KVKEVKNGRLAMVAIFGFSVQGILTGKGPVENWVDHLTDPFENNLFQLTSGF 112
>gi|157965835|gb|ABW06954.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 545
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/227 (64%), Positives = 175/227 (77%), Gaps = 7/227 (3%)
Query: 6 KSAPQS----IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
KSAP+S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE
Sbjct: 86 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 145
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
EVIH+RWAMLGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS
Sbjct: 146 EVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQS 205
Query: 121 ILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
++ + + +MG VE YR GG G G LD LYPGG FDPLGLA+DPD AELKVKEL
Sbjct: 206 VVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKEL 265
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KNGRLAM +M GF+VQ +VT GP+ENL H+ADP +NN +++ + F
Sbjct: 266 KNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 312
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 171/227 (75%), Gaps = 12/227 (5%)
Query: 6 KSAPQS----IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
KSAP+S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE
Sbjct: 321 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 380
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
EVIH+RWAML V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS
Sbjct: 381 EVIHARWAML-----VTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQS 435
Query: 121 ILAIWACQVVLMGFVEGYRIGGG--PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
++ + + +MG VE YR GGG G LD LYPGG FDPLGLA+DPD AELKVKEL
Sbjct: 436 VVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKEL 495
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KNGRLAM +M GF+VQ +VT GP+ENL H+ADP +NN +++ + F
Sbjct: 496 KNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGF 542
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 62/77 (80%)
Query: 149 LDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYD 208
LD LYPGG FDPLGLA+DPD AELKVKELKNGRLAM +M GF+VQ +VT GP+ENL
Sbjct: 1 LDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTF 60
Query: 209 HIADPVANNAWAYATNF 225
H+ADP +NN +++ + F
Sbjct: 61 HLADPSSNNIFSFTSGF 77
>gi|145078761|tpg|DAA05883.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Euglena gracilis]
Length = 367
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/228 (64%), Positives = 175/228 (76%), Gaps = 7/228 (3%)
Query: 6 KSAPQS----IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
KSAP+S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE
Sbjct: 34 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 93
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
EVIH+RWAMLGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS
Sbjct: 94 EVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQS 153
Query: 121 ILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
++ + + +MG VE YR GG G G LD LYPGG FDPLGLA+DPD AELKVKEL
Sbjct: 154 VVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKEL 213
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
KNGRLAM +M GF+VQ +VT GP+ENL H+ADP +NN +++ + F
Sbjct: 214 KNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGFA 261
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%), Gaps = 5/99 (5%)
Query: 6 KSAPQS----IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
KSAP+S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE
Sbjct: 269 KSAPKSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREA 328
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGA 99
EVIH+RWAMLGALG V PE+L+ NGV FGE AVW+KAGA
Sbjct: 329 EVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGA 367
>gi|145078711|tpg|DAA05881.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Euglena gracilis]
Length = 642
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/224 (65%), Positives = 172/224 (76%), Gaps = 3/224 (1%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
KS S WYGPDR K+LGP + + PSYLTGE PGDYGWDTAGL +DP T A+ RE EVIH
Sbjct: 384 KSDNLSQWYGPDRAKWLGPLTGEVPSYLTGELPGDYGWDTAGLGSDPTTLARYREAEVIH 443
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
+RWAMLGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS++
Sbjct: 444 ARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLT 503
Query: 125 WACQVVLMGFVEGYRIGG--GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGR 182
+ + +MG VE YR GG G G LD LYPGG FDPLGLA+DPD AELKVKELKNGR
Sbjct: 504 FLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGR 563
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
LAM +M GF+VQ +VT GP+ENL H+ADP ANN +++ + F
Sbjct: 564 LAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGFA 607
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 7 SAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+A S WYGP+RPK+LGP S P YL GE+ GDYG+DTAGL+ADP+ F + R+ E+ +
Sbjct: 149 AATGSKWYGPNRPKWLGPLSGGAVPEYLKGEYAGDYGFDTAGLAADPKLFQRYRDAELQN 208
Query: 66 SRWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
RWAMLG LGC+ PE+LS GV + E VWFK GA I + G +DYL NP LIHA ++L
Sbjct: 209 GRWAMLGVLGCLAPEVLSNVFGVPYPEPVWFKTGATILNGGSIDYLANPKLIHASNLLLT 268
Query: 125 WACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRL 183
++V E +R G GPLG+ D YPGG FDPLGL+ DP FAE KVKE+KNGRL
Sbjct: 269 LVLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAKVKEVKNGRL 328
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
AM +M G FVQA VTG+ P+ENL H+A+P N +YA
Sbjct: 329 AMLAMLGLFVQAGVTGQSPLENLSAHLANPGVNFWTSYA 367
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 110/145 (75%), Gaps = 3/145 (2%)
Query: 85 NGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG 143
NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS++ + + +MG VE YR GGG
Sbjct: 2 NGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGG 61
Query: 144 --PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G LD LYPGG FDPLGLA+DPD AELKVKELKNGRLAM +M GF+VQ +VT G
Sbjct: 62 VGDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAG 121
Query: 202 PIENLYDHIADPVANNAWAYATNFV 226
P+ENL H+ADP ANN +++ + F
Sbjct: 122 PVENLTFHLADPSANNIFSFTSGFA 146
>gi|13676406|dbj|BAB41192.1| type I chlorophyll a/b-binding protein b [Amaranthus tricolor]
Length = 154
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/154 (90%), Positives = 149/154 (96%)
Query: 40 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA 99
DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 60
Query: 100 QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFD 159
QIFSEGGLDYLGNP+LIHAQSILAIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FD
Sbjct: 61 QIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 120
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
PLGLADDPD FAELKVKE+KNGRLAMFSMFGFFV
Sbjct: 121 PLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 154
>gi|13676402|dbj|BAB41190.1| type I chlorophyll a/b-binding protein a [Amaranthus tricolor]
Length = 154
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 139/154 (90%), Positives = 148/154 (96%)
Query: 40 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA 99
DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPE+L++NGVKFGEAVWFKAG+
Sbjct: 1 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCIFPELLARNGVKFGEAVWFKAGS 60
Query: 100 QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFD 159
QIFSEGGLDYLGNP LIHAQSILAIWACQV+LMG VEGYRI GGPLGE +DPLYPGG+FD
Sbjct: 61 QIFSEGGLDYLGNPTLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 120
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
PLGLADDPD FAELKVKE+KNGRLAMFSMFGFFV
Sbjct: 121 PLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 154
>gi|242045514|ref|XP_002460628.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
gi|241924005|gb|EER97149.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
Length = 160
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/160 (88%), Positives = 152/160 (95%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQV 60
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF
Sbjct: 61 VLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 121 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGN 160
>gi|388507164|gb|AFK41648.1| unknown [Lotus japonicus]
Length = 160
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/160 (86%), Positives = 151/160 (94%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSIL IWA QV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILVIWATQV 60
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF
Sbjct: 61 ILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGP+ENL DH++DPV NNAWAYATNFVPGK
Sbjct: 121 GFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK 160
>gi|224034127|gb|ACN36139.1| unknown [Zea mays]
Length = 191
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/160 (86%), Positives = 150/160 (93%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQV
Sbjct: 1 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQV 60
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VLMG +EGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMF
Sbjct: 61 VLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 120
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATN P
Sbjct: 121 GFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNLCPAS 160
>gi|297744047|emb|CBI37017.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 159/219 (72%), Gaps = 52/219 (23%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 17 SPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 76
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGALGCVFPE+LS+NGVKFGEAVWFKA AIWACQV+
Sbjct: 77 LGALGCVFPELLSRNGVKFGEAVWFKA-------------------------AIWACQVI 111
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
LMG VEGYRIGGGPLGE VKE+KNGRLAMFSMFG
Sbjct: 112 LMGAVEGYRIGGGPLGE---------------------------VKEIKNGRLAMFSMFG 144
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 145 FFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 183
>gi|47026851|gb|AAT08651.1| chloroplast chlorophyll A-B binding protein [Hyacinthus orientalis]
Length = 239
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/176 (80%), Positives = 153/176 (86%), Gaps = 3/176 (1%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
+TV S S WYGP+R KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Sbjct: 54 KTVSSG--SPWYGPERVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 111
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
VIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSIL
Sbjct: 112 VIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSIL 171
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQ-FAELKVKE 177
AIWA QV+LMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA FA V E
Sbjct: 172 AIWATQVLLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLARRSKTPFASSNVNE 227
>gi|147860827|emb|CAN83151.1| hypothetical protein VITISV_031291 [Vitis vinifera]
Length = 244
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/223 (68%), Positives = 167/223 (74%), Gaps = 26/223 (11%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTP FA+NR LEVIH RWA
Sbjct: 45 NELWYGPDRVKYLGPFSAQTPF----------------------AFARNRALEVIHGRWA 82
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E +WFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 83 MLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 142
Query: 129 VVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
VVLMG VEG+RI G P +G+G + LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 143 VVLMGLVEGFRINGLPGVGDG-NNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 201
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG
Sbjct: 202 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS 244
>gi|145078806|tpg|DAA05885.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Euglena gracilis]
Length = 695
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 171/224 (76%), Gaps = 7/224 (3%)
Query: 11 SIWYGPDRPKYLGPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYGP+R K+LGP+S+++ PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWA
Sbjct: 466 SAWYGPNRNKWLGPYSDRSVPSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWA 525
Query: 70 MLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA+GC PE L++ GV+FGE +WFKAGAQIFS GL+Y G P LIHA+S+LAI A Q
Sbjct: 526 MLGAVGCFLPEYLNRFFGVQFGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQ 585
Query: 129 VVLMGFVEGYRIGG---GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAM 185
V+LMG VE YR G G GE LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAM
Sbjct: 586 VLLMGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 645
Query: 186 FSMFGFFVQAIVTGKGPIENLYDHIADPVANNAW--AYATNFVP 227
+M GF+ QAIVTG+GP+EN H+ DP A+N A T F P
Sbjct: 646 MAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 689
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 167/223 (74%), Gaps = 6/223 (2%)
Query: 11 SIWYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYGPDR K+LGP+S+ TP YL GE PGDYGWD+AGL ADP T + RE E+IH RWA
Sbjct: 223 SQWYGPDRSKWLGPYSDALTPPYLNGELPGDYGWDSAGLGADPITLQRYREAELIHGRWA 282
Query: 70 MLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALG VFPE LS+N + E VWFKAGAQIFSEGGLDYLG+ L+HAQSIL I Q
Sbjct: 283 MLGALGVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLVHAQSILLILGTQ 342
Query: 129 VVLMGFVEGYRIGGG--PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG E YR G G G+ LD LYPGG FDPLGLA+DPD AELKVKE+KNGRLAMF
Sbjct: 343 VLLMGAAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEIKNGRLAMF 402
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAW--AYATNFVP 227
+MFGF+VQAIVTG+ P+ENL H+A P N AY T F P
Sbjct: 403 AMFGFYVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFTP 445
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 154/205 (75%), Gaps = 6/205 (2%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKN-GV 87
PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWAMLGA+GC PE L++ GV
Sbjct: 1 VPSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWAMLGAVGCFLPEYLNRFFGV 60
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG---GP 144
+FGE +WFKAGAQIFS GL+Y G P LIHA+S+LAI A QV+LMG VE YR G G
Sbjct: 61 QFGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQVLLMGAVEAYRAGNTAPGQ 120
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
GE LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAM +M GF+ QAIVTG+GP+E
Sbjct: 121 FGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMVAMLGFYAQAIVTGEGPVE 180
Query: 205 NLYDHIADPVANNAW--AYATNFVP 227
N H+ DP A+N A T F P
Sbjct: 181 NWLYHLQDPSAHNGLTAALVTQFAP 205
>gi|115790|sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 2;
AltName: Full=Chlorophyll a-b binding protein type II 2;
Short=CAB; AltName: Full=LHCP
gi|169376|gb|AAA33776.1| chlorophyll a/b-binding protein [Pinus sylvestris]
Length = 150
Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/150 (92%), Positives = 145/150 (96%)
Query: 80 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 139
E+L KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG +EGYR
Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR 60
Query: 140 IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199
+GGGPLGEGLDPLYPG AFDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTG
Sbjct: 61 VGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTG 120
Query: 200 KGPIENLYDHIADPVANNAWAYATNFVPGK 229
KGPIENLYDH+ADPVANNAWAYATNFVPGK
Sbjct: 121 KGPIENLYDHLADPVANNAWAYATNFVPGK 150
>gi|157965839|gb|ABW06956.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 468
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 171/224 (76%), Gaps = 7/224 (3%)
Query: 11 SIWYGPDRPKYLGPFSEQT-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYGP+R K+LGP+S+++ PSYLTGE PGDYGWDTAGL ADP T + RE E+IH RWA
Sbjct: 239 SAWYGPNRNKWLGPYSDRSVPSYLTGELPGDYGWDTAGLGADPFTLQRYREAELIHGRWA 298
Query: 70 MLGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA+GC PE L++ GV+FGE +WFKAGAQIFS GL+Y G P LIHA+S+LAI A Q
Sbjct: 299 MLGAVGCFLPEYLNRFFGVQFGEPIWFKAGAQIFSAEGLNYFGQPALIHAKSLLAILATQ 358
Query: 129 VVLMGFVEGYRIGG---GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAM 185
V+LMG VE YR G G GE LD LYPGG FDPLGLADDPD FAELKVKE+KNGRLAM
Sbjct: 359 VLLMGAVEAYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAM 418
Query: 186 FSMFGFFVQAIVTGKGPIENLYDHIADPVANNAW--AYATNFVP 227
+M GF+ QAIVTG+GP+EN H+ DP A+N A T F P
Sbjct: 419 VAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAALVTQFAP 462
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 164/218 (75%), Gaps = 6/218 (2%)
Query: 16 PDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
PDR K+LGP+S+ TP YL GE PGDYGWD+AGL ADP T + RE E+IH RWAMLGAL
Sbjct: 1 PDRSKWLGPYSDALTPPYLNGELPGDYGWDSAGLGADPITLQRYREAELIHGRWAMLGAL 60
Query: 75 GCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
G VFPE LS+N + E VWFKAGAQIFSEGGLDYLG+ L+HAQSIL I QV+LMG
Sbjct: 61 GVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLVHAQSILLILGTQVLLMG 120
Query: 134 FVEGYRIGGG--PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
E YR G G G+ LD LYPGG FDPLGLA+DPD AELKVKE+KNGRLAMF+MFGF
Sbjct: 121 AAEAYRTGNGLGNFGKDLDSLYPGGPFDPLGLANDPDTLAELKVKEIKNGRLAMFAMFGF 180
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAW--AYATNFVP 227
+VQAIVTG+ P+ENL H+A P N AY T F+P
Sbjct: 181 YVQAIVTGESPLENLSAHLASPFTVNGLNAAYMTQFMP 218
>gi|222618804|gb|EEE54936.1| hypothetical protein OsJ_02493 [Oryza sativa Japonica Group]
Length = 207
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/162 (85%), Positives = 149/162 (91%)
Query: 68 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAC 127
WAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA
Sbjct: 46 WAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAV 105
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFS 187
QVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFS
Sbjct: 106 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 165
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
MFGFFVQAIVTGKGP +ADPV NNAWAYATNFVPGK
Sbjct: 166 MFGFFVQAIVTGKGPPREPRRPLADPVNNNAWAYATNFVPGK 207
>gi|145079310|tpg|DAA05909.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Acetabularia acetabulum]
Length = 208
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/188 (75%), Positives = 158/188 (84%), Gaps = 2/188 (1%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R V + WYGP+R K+LGP+S+ PSYLTGEFPGDYGWDTAGLSADPETF K RE
Sbjct: 21 RNVGAKAADEWYGPNRAKWLGPYSDGAVPSYLTGEFPGDYGWDTAGLSADPETFKKYRET 80
Query: 62 EVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+R+AMLGALGCV PE+L+K GV FGE+VWF+AGAQIF EGGLDYLG+P LIHAQS
Sbjct: 81 ELIHARFAMLGALGCVTPELLAKYGGVSFGESVWFRAGAQIFQEGGLDYLGSPALIHAQS 140
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
I AI QVVLMG VEGYR+ GGP GEGLD LYPG +FDPLGLADDPD FAELK+KE+KN
Sbjct: 141 IGAIVISQVVLMGLVEGYRVNGGPAGEGLDSLYPGESFDPLGLADDPDTFAELKIKEIKN 200
Query: 181 GRLAMFSM 188
GRLAMFSM
Sbjct: 201 GRLAMFSM 208
>gi|47026929|gb|AAT08685.1| chloroplast chlorophyll a/b-binding protein [Hyacinthus orientalis]
Length = 156
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/156 (85%), Positives = 148/156 (94%)
Query: 74 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
LGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG
Sbjct: 1 LGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMG 60
Query: 134 FVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAM SMFGFFV
Sbjct: 61 AVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGFFV 120
Query: 194 QAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
QAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 121 QAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 156
>gi|375152106|gb|AFA36511.1| light harvesting chlorophyll a/b-binding protein Lhcb1, partial
[Lolium perenne]
Length = 155
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/155 (86%), Positives = 147/155 (94%)
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G FPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG
Sbjct: 1 GASFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 60
Query: 135 VEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
VEGYR+ GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQ
Sbjct: 61 VEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 120
Query: 195 AIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
AIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 121 AIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 155
>gi|302854483|ref|XP_002958749.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
gi|300255924|gb|EFJ40205.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
Length = 2775
Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats.
Identities = 125/153 (81%), Positives = 140/153 (91%)
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
ALGC+ PE+LSKNGV+FGEAVWFKAGAQIF EGGLDYLGNP+L+HAQ+I+A ACQV+LM
Sbjct: 2614 ALGCLTPELLSKNGVQFGEAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVILM 2673
Query: 133 GFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFF
Sbjct: 2674 GLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFF 2733
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
VQAIVTGKGPIENL DH+A+P NNA+A+AT F
Sbjct: 2734 VQAIVTGKGPIENLNDHLANPAVNNAFAFATKF 2766
>gi|157987285|gb|ABW07804.1| light-harvesting chlorphyll binding protein 3 [Solenostemon
scutellarioides]
Length = 193
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 143/182 (78%), Positives = 155/182 (85%), Gaps = 4/182 (2%)
Query: 40 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAG 98
DYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG
Sbjct: 1 DYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLNVTFKEPVWFKAG 60
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA 157
AQIF+EGGLDYLGNPNL+HAQSILA+ QVV+MG VEG+RI G +GEG D LYPGG
Sbjct: 61 AQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVVMGLVEGFRINGLDGVGEGND-LYPGGQ 119
Query: 158 -FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAN 216
FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVAN
Sbjct: 120 YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 179
Query: 217 NA 218
NA
Sbjct: 180 NA 181
>gi|449479523|ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 153
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/150 (88%), Positives = 142/150 (94%)
Query: 80 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 139
+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR
Sbjct: 4 SLLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 63
Query: 140 IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199
I GGPLGE DP+YPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTG
Sbjct: 64 IAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 123
Query: 200 KGPIENLYDHIADPVANNAWAYATNFVPGK 229
KGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 124 KGPLENLADHLADPVNNNAWAYATNFVPGK 153
>gi|49473448|gb|AAT66413.1| chloroplast light-harvesting complex II, partial [Chlorella
pyrenoidosa]
Length = 179
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 151/179 (84%), Gaps = 3/179 (1%)
Query: 46 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEG 105
AGLSADP+TFA+ RE+EVIH+RWAMLGALGC+ PE+L+KNG+ FGEAVWFKAGAQIF +G
Sbjct: 1 AGLSADPQTFARYREIEVIHARWAMLGALGCITPELLAKNGIPFGEAVWFKAGAQIFQDG 60
Query: 106 GLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP---LGEGLDPLYPGGAFDPLG 162
GL+YLGN +L+HAQSILA A QV+LMG E YR GG GE LD LYPGGAFDPLG
Sbjct: 61 GLNYLGNESLVHAQSILATLAVQVLLMGAAESYRANGGAPGGFGEDLDSLYPGGAFDPLG 120
Query: 163 LADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAY 221
LADDPD AELKVKE+KNGRLAMFSMFGFFVQAIVTG+GPI NL H++DP NNAW Y
Sbjct: 121 LADDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPTGNNAWNY 179
>gi|553065|gb|AAA65447.1| chlorophyll a/b binding protein, partial [Euglena gracilis]
Length = 334
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/185 (71%), Positives = 152/185 (82%), Gaps = 2/185 (1%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR K+LGP + Q P+YLTGE PGDYGWDTAGL ADP T A+ RE EVIH+RWAM
Sbjct: 150 SQWYGPDRAKWLGPLTGQVPAYLTGELPGDYGWDTAGLGADPVTLARYREAEVIHARWAM 209
Query: 71 LGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS++ + +
Sbjct: 210 LGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTL 269
Query: 130 VLMGFVEGYRIGGG-PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+MG VEGYR GGG PLG+ LD LYPGG FDPLGLA+DPD FAELKVKE+KNGRLAM +M
Sbjct: 270 AIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKVKEVKNGRLAMVAM 329
Query: 189 FGFFV 193
GF+V
Sbjct: 330 LGFYV 334
>gi|149392733|gb|ABR26169.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 144
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/144 (90%), Positives = 137/144 (95%)
Query: 86 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
GVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI GGPL
Sbjct: 1 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPL 60
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
GE +DPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 61 GEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 120
Query: 206 LYDHIADPVANNAWAYATNFVPGK 229
L DH+ADPV NNAWAYATNFVPGK
Sbjct: 121 LADHLADPVNNNAWAYATNFVPGK 144
>gi|116788195|gb|ABK24790.1| unknown [Picea sitchensis]
Length = 151
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/145 (83%), Positives = 135/145 (93%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+++V ++ S WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 7 KKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 66
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+PNL+HAQSI
Sbjct: 67 EVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPNLVHAQSI 126
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLG 146
LAIWACQV+LMG +EGYR+ GGPLG
Sbjct: 127 LAIWACQVILMGAIEGYRVAGGPLG 151
>gi|168812218|gb|ACA30285.1| putative chlorophyll A-B binding protein type I [Cupressus
sempervirens]
Length = 134
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/134 (91%), Positives = 129/134 (96%)
Query: 92 AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP 151
AVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG +EGYR+GGGPLGEGLDP
Sbjct: 1 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP 60
Query: 152 LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
LYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAM SMFGFFVQAIVTGKGPIENLYDH+A
Sbjct: 61 LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMSSMFGFFVQAIVTGKGPIENLYDHLA 120
Query: 212 DPVANNAWAYATNF 225
DP NNAWAYATNF
Sbjct: 121 DPSTNNAWAYATNF 134
>gi|117661756|gb|ABK55666.1| chloroplast chlorophyll a/b-binding protein [Cucumis sativus]
Length = 137
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 131/137 (95%)
Query: 38 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 97
PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKA
Sbjct: 1 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 60
Query: 98 GAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA 157
G+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE P+YPGG+
Sbjct: 61 GSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTVPIYPGGS 120
Query: 158 FDPLGLADDPDQFAELK 174
FDPLGLADDP+ FAELK
Sbjct: 121 FDPLGLADDPEAFAELK 137
>gi|225690800|gb|ACO06086.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 215
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/169 (77%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
LEVIHSRWAMLGALGCVFPEIL KNG+KFGEAVWFKAG QIF EGGLDYLG+PNL+HAQS
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILCKNGLKFGEAVWFKAGPQIFFEGGLDYLGHPNLVHAQS 154
Query: 121 ILAIW-ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPD 168
L I + PL G D +YPGGA PLGL+ DP
Sbjct: 155 FLPILGGASGAHEASSRATVLVAAPL-LGPDIIYPGGALYPLGLSADPS 202
>gi|169743370|gb|ACA66263.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 261
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 155/217 (71%), Gaps = 6/217 (2%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R +A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 35 RARPTAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 94
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
EVIH RWAMLG G + PE +K G G EAVWFK GA + L+Y GN I
Sbjct: 95 EVIHCRWAMLGVAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNS--IPINL 152
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
ILA+ A +VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KN
Sbjct: 153 ILAVIA-EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKN 209
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAMFSM GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 210 GRLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 246
>gi|459020|gb|AAA16605.1| light harvesting chlorophyll a/b binding protein of PSII, partial
[Euglena gracilis]
Length = 322
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 142/173 (82%), Gaps = 2/173 (1%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR K+LGP + Q P+YLTGE PGDYGWDTAGL ADP T A+ RE EVIH+RWAM
Sbjct: 150 SQWYGPDRAKWLGPLTGQVPAYLTGELPGDYGWDTAGLGADPVTLARYREAEVIHARWAM 209
Query: 71 LGALGCVFPEILSKNGVKFGE-AVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LGALG V PE+L+ NGV FGE AVW+KAGAQIFS GL+YLGNP+LIHAQS++ + +
Sbjct: 210 LGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTL 269
Query: 130 VLMGFVEGYRIGGG-PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
+MG VEGYR GGG PLG+ LD LYPGG FDPLGLA+DPD FAELKVKE+KNG
Sbjct: 270 AIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKVKEVKNG 322
>gi|6446570|dbj|BAA78595.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 222
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/187 (68%), Positives = 144/187 (77%), Gaps = 8/187 (4%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R T A +YGPDR K+LGPFS+ TPSYLTGEFPGDYGWDTAGLSADPETFA+ RE+
Sbjct: 21 RSTSVIARAVEFYGPDRAKWLGPFSDDTPSYLTGEFPGDYGWDTAGLSADPETFARYREI 80
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EVIH+RWAMLGALGC+ PE++ G E VWFKAGAQIFSEGGLDYLGNP+L+HAQSI
Sbjct: 81 EVIHARWAMLGALGCITPELI---GGDIAEPVWFKAGAQIFSEGGLDYLGNPSLVHAQSI 137
Query: 122 LAIWACQVVLMGFVEGYRIGG----GPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+A A QV+LMG E +R G G GE LD LYPG AFDPL PD FAELKVKE
Sbjct: 138 IATLAVQVILMGQAEAFRAAGYVVPGGFGEDLDNLYPGDAFDPLAWL-IPDTFAELKVKE 196
Query: 178 LKNGRLA 184
+KNGRLA
Sbjct: 197 IKNGRLA 203
>gi|338746088|emb|CCC15093.1| putative chloroplast light-harvesting complex II protein precursor
[Lepidodinium chlorophorum]
Length = 215
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 153/206 (74%), Gaps = 6/206 (2%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRT + P+RP +LGP++ TPSYL G GDYGWDT+GLS PE +NRE
Sbjct: 13 MRRTTAATS-----APERPLWLGPYTGATPSYLDGSLVGDYGWDTSGLSTTPEALLRNRE 67
Query: 61 LEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
LE++H+RWAMLGALG + PE+L+ G E VWFKAGAQIFS GGLDYLGNP+L+HAQ
Sbjct: 68 LELLHARWAMLGALGSLLPELLATYAGTPLLEPVWFKAGAQIFSPGGLDYLGNPSLVHAQ 127
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
SILAI QV+LMG EGYR+ GGPLGE D LYPG +FDPLG ++DP+ EL+ KE+K
Sbjct: 128 SILAILGFQVLLMGLSEGYRLAGGPLGEVGDALYPGASFDPLGFSEDPESLLELQTKEIK 187
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIEN 205
NGRLAM +M G + QA+VTGKGP+ N
Sbjct: 188 NGRLAMLAMLGMYTQALVTGKGPVSN 213
>gi|914283|gb|AAB34067.1| light-harvesting complex b type 2, Lhcb2 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 130 aa]
Length = 130
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/131 (92%), Positives = 125/131 (95%), Gaps = 1/131 (0%)
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAF 158
+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRI G P G GLDPLYPGGAF
Sbjct: 1 SQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRIAGDPSG-GLDPLYPGGAF 59
Query: 159 DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
DPLGLADDPD FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPV NNA
Sbjct: 60 DPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVNNNA 119
Query: 219 WAYATNFVPGK 229
WA+ATNFVPGK
Sbjct: 120 WAFATNFVPGK 130
>gi|32307466|gb|AAP79138.1| chlorophyll a/b-binding protein II 2 [Bigelowiella natans]
Length = 346
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 153/213 (71%), Gaps = 4/213 (1%)
Query: 13 WYGPDRPKYL-GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+L F P YLTGE+PGDYGWD GLS+DPETFA RE E++H+RWAML
Sbjct: 125 WYGPDRPKWLPDAFLAGVPDYLTGEYPGDYGWDALGLSSDPETFANYREAELLHARWAML 184
Query: 72 GALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GALGC+FPEIL+ N GV E VWFKAGA + ++ +DYLG+P L+HA SI+AI A QV+
Sbjct: 185 GALGCIFPEILAMNYGVGLEEPVWFKAGALVLNDKSIDYLGSPQLVHASSIIAIAAAQVL 244
Query: 131 LMGFVEGYRIGG-GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
LMG E YR G P GE D ++PGG F+PL D AELKVKE+KNGRLAMFSM
Sbjct: 245 LMGGAEAYRASGVAPNGEEFDKMHPGGYYFNPLKFGKDEADLAELKVKEIKNGRLAMFSM 304
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAY 221
GF++QA TG GP++NL DH AD N + Y
Sbjct: 305 LGFYIQAATTGNGPLQNLVDHRADAANENIFKY 337
>gi|55668304|gb|AAV54188.1| chloroplast major light-harvesting complex II protein m9
[Haematococcus pluvialis]
Length = 152
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/151 (77%), Positives = 132/151 (87%)
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE 136
V PE+L+ NGV FGE VWFKAGAQIF +GGL+YLGNP+LIHAQ+I+A A QV+LMG VE
Sbjct: 1 VTPELLAANGVSFGEPVWFKAGAQIFQDGGLNYLGNPSLIHAQNIVATLAVQVILMGLVE 60
Query: 137 GYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
GYR+ GGP GEGLDPLYPG AFDPLGLADDPD FAELKVKE+KNGRLAMFS FGFFVQAI
Sbjct: 61 GYRMNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAI 120
Query: 197 VTGKGPIENLYDHIADPVANNAWAYATNFVP 227
VTGKGPI+NL DH+A+P NNA+A+AT F P
Sbjct: 121 VTGKGPIQNLTDHLANPAENNAFAFATKFTP 151
>gi|60650129|dbj|BAD90930.1| chlorophyll a/b-binding protein [Adiantum capillus-veneris]
Length = 215
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/155 (76%), Positives = 129/155 (83%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
KS+ +I YG DR YLGPFS PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 49 KSSSGNIRYGADRLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 108
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIW 125
SRWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++GGLDYLGNP+L+HAQSILAIW
Sbjct: 109 SRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIW 168
Query: 126 ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDP 160
ACQV+LMG VEGYR+ PL P P P
Sbjct: 169 ACQVILMGAVEGYRVAVVPLVRLRTPSTPVAPSTP 203
>gi|209778961|gb|ACI87791.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 124
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/123 (93%), Positives = 121/123 (98%)
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
+KFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG +EGYR+GGGPLG
Sbjct: 1 IKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLG 60
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
EGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL
Sbjct: 61 EGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 120
Query: 207 YDH 209
YDH
Sbjct: 121 YDH 123
>gi|116785674|gb|ABK23816.1| unknown [Picea sitchensis]
Length = 166
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/117 (94%), Positives = 115/117 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
LEVIH RWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH
Sbjct: 98 LEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 154
>gi|515616|emb|CAA43802.1| LHC II Type III chlorophyll a /b binding protein [Brassica napus]
Length = 202
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/160 (77%), Positives = 133/160 (83%), Gaps = 4/160 (2%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 44 NDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 103
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 104 MLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 163
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADD 166
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADD
Sbjct: 164 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADD 202
>gi|47026947|gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 211
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 128/144 (88%), Gaps = 6/144 (4%)
Query: 1 MRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+T + P+++ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 35 MRKTA-AKPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 93
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
+KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 94 SKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 153
Query: 116 IHAQSILAIWACQVVLMGFVEGYR 139
+HAQSILAIWA QV+LMG GY+
Sbjct: 154 VHAQSILAIWATQVLLMGGRRGYK 177
>gi|149941244|emb|CAO02554.1| putative LHCII type III chlorophyll a/b binding protein [Vigna
unguiculata]
Length = 211
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/165 (75%), Positives = 133/165 (80%), Gaps = 4/165 (2%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWA
Sbjct: 48 NDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWA 107
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
+LGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 108 LLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 167
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFA 171
VVLMG EG+RI G +GEG + LYP G FDPLGLADDP FA
Sbjct: 168 VVLMGLAEGFRINGLDGVGEG-NNLYPXGQYFDPLGLADDPTTFA 211
>gi|169199|gb|AAA33703.1| Major Cab protein [Petunia x hybrida]
Length = 136
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/136 (83%), Positives = 124/136 (91%)
Query: 94 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLY 153
W A +QIFSEG LDYLGNP+LIHAQSILA+WACQVVLMG VEGYR+ GGPLGE +DPL
Sbjct: 1 WIPAVSQIFSEGELDYLGNPSLIHAQSILAVWACQVVLMGAVEGYRVAGGPLGEVIDPLC 60
Query: 154 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP ENL DH+ADP
Sbjct: 61 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPFENLADHLADP 120
Query: 214 VANNAWAYATNFVPGK 229
V NNAW+YATNFVPGK
Sbjct: 121 VNNNAWSYATNFVPGK 136
>gi|1165248|gb|AAA85589.1| chlorophyll a/b binding protein of PS II, partial [Picea abies]
Length = 131
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/130 (86%), Positives = 121/130 (93%)
Query: 100 QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFD 159
QIFSEGGLDYLG+PNL+HAQSILAIWACQV+LMG +EGYR+ GGPLGE DP+YPGG FD
Sbjct: 2 QIFSEGGLDYLGSPNLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFD 61
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAW 219
PLGLADDPD FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ NL DH+ADPV NNAW
Sbjct: 62 PLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLXNLADHLADPVNNNAW 121
Query: 220 AYATNFVPGK 229
AYATNFVPGK
Sbjct: 122 AYATNFVPGK 131
>gi|169201|gb|AAA33704.1| Major Cab protein [Petunia x hybrida]
Length = 129
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 121/129 (93%)
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAF 158
+QIFSEG LDYLGNP+L+HAQSILA WACQVVLMG VEGYR+ GGPLGE +DPLYPGG+F
Sbjct: 1 SQIFSEGELDYLGNPSLVHAQSILASWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSF 60
Query: 159 DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
DPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNA
Sbjct: 61 DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNA 120
Query: 219 WAYATNFVP 227
W+YATNFVP
Sbjct: 121 WSYATNFVP 129
>gi|13676408|dbj|BAB41193.1| type III chlorophyll a/b-binding protein [Amaranthus tricolor]
Length = 156
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/157 (78%), Positives = 132/157 (84%), Gaps = 4/157 (2%)
Query: 40 DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAG 98
DYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L K V F E VWFKAG
Sbjct: 1 DYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWVRVSFKEPVWFKAG 60
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGA 157
AQIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG VEG+RI G +GEG D LYPGG
Sbjct: 61 AQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQ 119
Query: 158 -FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFV
Sbjct: 120 YFDPLGLADDPVPFAELKVKEIKNGRLAMFSMFGFFV 156
>gi|227202590|dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana]
Length = 162
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/162 (75%), Positives = 135/162 (83%), Gaps = 4/162 (2%)
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA GC+ PE+L K V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ Q
Sbjct: 1 MLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 60
Query: 129 VVLMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+LMG VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMF
Sbjct: 61 VILMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 119
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 228
SMFGFFVQAIVTGKGP+ENL DH+ +PVANNAWA+AT F PG
Sbjct: 120 SMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWAFATKFAPG 161
>gi|305377032|dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 129
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/125 (88%), Positives = 118/125 (94%)
Query: 105 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLA 164
GGLDYLGNP+LIHAQSILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLA
Sbjct: 5 GGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 64
Query: 165 DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
DDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATN
Sbjct: 65 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 124
Query: 225 FVPGK 229
FVPGK
Sbjct: 125 FVPGK 129
>gi|305377030|dbj|BAJ15878.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 125
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 117/125 (93%)
Query: 105 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLA 164
GGLDYLGNP+LIHAQSILAIWACQV+LMG VEGYRI GGPLGE DPLYPGG+FDPLGLA
Sbjct: 1 GGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLA 60
Query: 165 DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
DDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL D +ADPV NNAWAYATN
Sbjct: 61 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADGLADPVNNNAWAYATN 120
Query: 225 FVPGK 229
FVPGK
Sbjct: 121 FVPGK 125
>gi|169197|gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
Length = 125
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/125 (85%), Positives = 118/125 (94%)
Query: 105 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLA 164
G LDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE +DPLYPGG+FDPLGLA
Sbjct: 1 GELDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLA 60
Query: 165 DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATN
Sbjct: 61 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATN 120
Query: 225 FVPGK 229
FVPGK
Sbjct: 121 FVPGK 125
>gi|357496383|ref|XP_003618480.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355493495|gb|AES74698.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 180
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/131 (82%), Positives = 118/131 (90%)
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAF 158
QIFS+GGLDYLGNP+L+HAQSILAIW +LMG VEGYRI GPLGE +DPLYPGG+F
Sbjct: 50 TQIFSDGGLDYLGNPSLVHAQSILAIWVVLAILMGAVEGYRIADGPLGEVVDPLYPGGSF 109
Query: 159 DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
DPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVT KGP+ENL DHIADPV +NA
Sbjct: 110 DPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTEKGPLENLADHIADPVNSNA 169
Query: 219 WAYATNFVPGK 229
WA+ATNFVPGK
Sbjct: 170 WAFATNFVPGK 180
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 185 MFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
MFSMFGFFVQAIVTGKGP+ENL DHI DPV NNAWA+ATNFVPG
Sbjct: 1 MFSMFGFFVQAIVTGKGPLENLADHITDPVNNNAWAFATNFVPGN 45
>gi|356532722|ref|XP_003534920.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 125
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/122 (87%), Positives = 114/122 (93%)
Query: 108 DYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDP 167
DYLGNP+LIHAQSILAIWA QV+LMG VEGYRI GGPLGE DP+YPGG+FDPLGLADDP
Sbjct: 4 DYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 63
Query: 168 DQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVP
Sbjct: 64 EAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 123
Query: 228 GK 229
GK
Sbjct: 124 GK 125
>gi|397789260|gb|AFO67219.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
Length = 155
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/121 (85%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
Query: 1 MRRTVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
MR+T K S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNR
Sbjct: 35 MRKTAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNR 94
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ
Sbjct: 95 ELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 154
Query: 120 S 120
S
Sbjct: 155 S 155
>gi|82077|pir||F24039 chlorophyll a/b-binding protein 3B precursor - tomato (fragments)
gi|224931|prf||1204205F protein 3B,chlorophyll binding
Length = 167
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 113/120 (94%), Gaps = 1/120 (0%)
Query: 111 GNP-NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQ 169
G+P +L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+
Sbjct: 48 GSPWSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 107
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 108 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
>gi|82076|pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomato (fragments)
gi|224930|prf||1204205E protein 3A,chlorophyll binding
Length = 167
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/120 (85%), Positives = 113/120 (94%), Gaps = 1/120 (0%)
Query: 111 GNP-NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQ 169
G+P +L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+
Sbjct: 48 GSPWSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEA 107
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 108 FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 167
>gi|115824|sp|P14277.1|CB2F_SOLLC RecName: Full=Chlorophyll a-b binding protein 3B, chloroplastic;
AltName: Full=LHCII type I CAB-3B; Short=LHCP; Flags:
Precursor
Length = 267
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>gi|115823|sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding protein 3A, chloroplastic;
AltName: Full=LHCII type I CAB-3A; Short=LHCP; Flags:
Precursor
Length = 267
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 211
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 212 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>gi|115821|sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding protein 1C, chloroplastic;
AltName: Full=LHCII type I CAB-1C; Short=LHCP; Flags:
Precursor
Length = 265
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|224928|prf||1204205C protein 1C,chlorophyll binding
Length = 165
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 50 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 109
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 110 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
>gi|302808391|ref|XP_002985890.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146397|gb|EFJ13067.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/227 (51%), Positives = 146/227 (64%), Gaps = 16/227 (7%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
+++ S+W+G DRPK+LGP P +L G FPGDYG+D AGL DP F K E++
Sbjct: 91 MRARDASVWFGQDRPKWLGPIPYDYPDHLQGSFPGDYGFDIAGLGKDPAKFDKFFNFEIL 150
Query: 65 HSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSI 121
H+RWAML ALG V PE+L K GVKF E+VW++ G LDYLG P +++ AQ I
Sbjct: 151 HARWAMLAALGVVIPEVLEKFFGVKFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGI 210
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFA 171
L I CQ +LM E R G E L+PL YPGG FDPLGL+ DP F
Sbjct: 211 LVIAICQFLLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFE 267
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
ELKVKE+KNGRLAM + GF+VQA+VT KGP+ENL DH+ DP+ NNA
Sbjct: 268 ELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQDPLHNNA 314
>gi|297740653|emb|CBI30835.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 121/178 (67%), Gaps = 51/178 (28%)
Query: 52 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLG 111
P TFAKNRELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSE
Sbjct: 22 PNTFAKNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE------- 74
Query: 112 NPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFA 171
V+LMG VEGYRI GGPLGE
Sbjct: 75 -----------------VILMGAVEGYRIAGGPLGE------------------------ 93
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 94 ---VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 148
>gi|82074|pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomato (fragments)
gi|224926|prf||1204205A protein 1A,chlorophyll binding
Length = 165
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 50 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 109
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 110 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 165
>gi|115816|sp|P14274.1|CB2A_SOLLC RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type I CAB-1A; Short=LHCP; Flags:
Precursor
Length = 265
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 209
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 210 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>gi|413933709|gb|AFW68260.1| hypothetical protein ZEAMMB73_510715 [Zea mays]
Length = 144
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/110 (90%), Positives = 103/110 (93%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWY PDRPKYL PFSEQT SYLTGEFPGDYGWDTAGLSAD ETFA+NRE
Sbjct: 32 MRRTVKSAPQSIWYDPDRPKYLAPFSEQTSSYLTGEFPGDYGWDTAGLSADHETFARNRE 91
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL 110
LEVIHS WAMLGALGCVFPE+L+KN VKFGE VWFKAGAQIFSEGGLDYL
Sbjct: 92 LEVIHSWWAMLGALGCVFPEVLAKNDVKFGEVVWFKAGAQIFSEGGLDYL 141
>gi|170421|gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [Solanum
lycopersicum]
gi|170426|gb|AAA34157.1| chlorophyll a/b-binding protein Cab-3B, partial [Solanum
lycopersicum]
Length = 116
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 116
>gi|159138421|gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138423|gb|ABW89214.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138425|gb|ABW89215.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138429|gb|ABW89217.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138433|gb|ABW89219.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138437|gb|ABW89221.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138439|gb|ABW89222.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138441|gb|ABW89223.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138443|gb|ABW89224.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138445|gb|ABW89225.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138447|gb|ABW89226.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138451|gb|ABW89228.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138453|gb|ABW89229.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138455|gb|ABW89230.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138457|gb|ABW89231.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+LIHAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|162461137|ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|733456|gb|AAA64415.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
Length = 283
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL + P YLTGE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 65 WYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L+Y GN I ++A+ A +
Sbjct: 125 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNS--IPINLVVAVIA-E 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
F FF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 FAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|115822|sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding protein 1D; AltName:
Full=LHCII type I CAB-1D; Short=LHCP
gi|170428|gb|AAA34158.1| chlorophyll a/b-binding protein Cab-1D, partial [Solanum
lycopersicum]
gi|224929|prf||1204205D protein 1D,chlorophyll binding
Length = 116
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
>gi|302789319|ref|XP_002976428.1| light-harvesting complex [Selaginella moellendorffii]
gi|300156058|gb|EFJ22688.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 145/227 (63%), Gaps = 16/227 (7%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
+++ S+W+G DRPK+LGP P +L G FPGDYG+D AGL DP F K E++
Sbjct: 91 MRARDASVWFGQDRPKWLGPIPYDYPDHLQGSFPGDYGFDIAGLGKDPAKFDKFFNFEIL 150
Query: 65 HSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSI 121
H+RWAML ALG V PE+L K GV F E+VW++ G LDYLG P +++ AQ I
Sbjct: 151 HARWAMLAALGVVIPEVLEKFFGVNFAESVWWRVGYAKLEGDTLDYLGIPGLHIVGAQGI 210
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFA 171
+ I CQ +LM E R G E L+PL YPGG FDPLGL+ DP F
Sbjct: 211 IVIAICQFLLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGVLFDPLGLSKDPATFE 267
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
ELKVKE+KNGRLAM + GF+VQA+VT KGP+ENL DH+ DP+ NNA
Sbjct: 268 ELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQDPLHNNA 314
>gi|194697528|gb|ACF82848.1| unknown [Zea mays]
Length = 283
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL + P YLTGE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 65 WYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L+Y GN I ++A+ A +
Sbjct: 125 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNS--IPINLVVAVIA-E 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VILVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
F FF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 FAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|168053458|ref|XP_001779153.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669412|gb|EDQ55999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 138/204 (67%), Gaps = 5/204 (2%)
Query: 10 QSIWYGPDRPKYLGPFS--EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 67
++ +YGP+RP + GPF+ + P YL GE+PGDYG D L PE +AK R E+++ R
Sbjct: 10 RTAYYGPNRPLWKGPFTSPKDVPEYLKGEYPGDYGCDIFKLVRLPENYAKLRSQELMNGR 69
Query: 68 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAC 127
WAMLG GC+ PE+++ N E VWFK GAQIFSE G+DYLG P I+A S++A+
Sbjct: 70 WAMLGITGCLVPELINSNPTPGFEPVWFKTGAQIFSEAGIDYLGVPGFINAHSLVAVIVV 129
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMF 186
Q +LMG E RI P EG D YPGG AFDPLG + DP+ FAELKVKE+KNGRLAM
Sbjct: 130 QALLMGVAEYARIKLSP--EGNDAFYPGGKAFDPLGFSSDPESFAELKVKEIKNGRLAMM 187
Query: 187 SMFGFFVQAIVTGKGPIENLYDHI 210
+M G F Q VTG P++NL+D +
Sbjct: 188 AMAGLFAQGAVTGVSPLQNLHDFL 211
>gi|170409|gb|AAA34150.1| chlorophyll a/b-binding protein Cab-1A, partial [Solanum
lycopersicum]
gi|170414|gb|AAA34152.1| chlorophyll a/b-binding protein Cab-1C, partial [Solanum
lycopersicum]
Length = 116
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 110/116 (94%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+L+HAQSILAIWACQVVLMG VEGYRI GGPLGE +DPLYPGG+FDPLGLA+DP+ FAEL
Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 116
>gi|159138449|gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/116 (87%), Positives = 109/116 (93%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+LIHAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP FAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPXAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW+YATNFVPGK
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGK 116
>gi|356535308|ref|XP_003536189.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 287
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 69 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 128
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I ILA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLILAVVA-E 185
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 186 IVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 243
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 244 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|162461210|ref|NP_001105698.1| light harvesting chlorophyll a/b binding protein5 precursor [Zea
mays]
gi|733454|gb|AAA64414.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|414591311|tpg|DAA41882.1| TPA: chlorophyll a/b-binding apoprotein CP26 Precursor [Zea mays]
Length = 283
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL + P YLTGE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 65 WYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L Y GN I ++A+ A +
Sbjct: 125 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNS--IPINLVVAVIA-E 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
F FF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 FAFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|255638437|gb|ACU19528.1| unknown [Glycine max]
Length = 287
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 69 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 128
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I ILA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINFILAVVA-E 185
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 186 IVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 243
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 244 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 272
>gi|168000216|ref|XP_001752812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168000420|ref|XP_001752914.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695975|gb|EDQ82316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696077|gb|EDQ82418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 139/210 (66%), Gaps = 8/210 (3%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL ++ P YLTGE PGDYG+D GLS PE F + + E+IH+RWA
Sbjct: 6 WYGPDRRIYLPEGLLAKDEIPEYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYELIHARWA 65
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVW+K GA + + Y G ++ + A +
Sbjct: 66 MLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPLN---LAAAVIAE 122
Query: 129 VVLMGFVEGYR-IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFS 187
V+L+G E YR PLG LD L+PGGAFDPLGLA DPDQFA LKVKE+KNGRLAMFS
Sbjct: 123 VILVGGAEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAMFS 182
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANN 217
M GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 183 MLGFFVQAYVTGEGPVENLSAHLSDPFGNN 212
>gi|159138427|gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138431|gb|ABW89218.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138435|gb|ABW89220.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/116 (86%), Positives = 109/116 (93%)
Query: 114 NLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+LIHAQSILAIWA QV+LMG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAEL
Sbjct: 1 SLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEL 60
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
KVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPVANNAW+YATNFVPG
Sbjct: 61 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAWSYATNFVPGN 116
>gi|255645788|gb|ACU23386.1| unknown [Glycine max]
Length = 289
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 142/209 (67%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D +GLS PE F+K + E+IH+RWA
Sbjct: 71 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPSGLSKKPEDFSKYQAFELIHARWA 130
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 131 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 187
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA+DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 188 IVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 245
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 246 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|224083380|ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
Length = 338
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 146/228 (64%), Gaps = 16/228 (7%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
K+ +S WYG +RP++LGP S Q P+YL+GE PGDYG+D AGL+ DP F + E++H
Sbjct: 109 KARKESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILH 168
Query: 66 SRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSIL 122
+RWAML ALG + PE+L +G F E VW++ G LDYLG P L A Q +L
Sbjct: 169 ARWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVL 228
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAE 172
I CQ +LM E R G E L+PL YPGG FDPL L+ DP F E
Sbjct: 229 VIAFCQAILMVGPEYARYCG---IEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEE 285
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
LKVKE+KNGRLAM + GF++QA +TGKGP+ENL +HI+DP+ NN ++
Sbjct: 286 LKVKEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFS 333
>gi|356576567|ref|XP_003556402.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 288
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 70 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 129
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 130 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVVA-E 186
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 187 IVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 244
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 245 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|356530963|ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 291
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 141/209 (67%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 73 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWA 132
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 133 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 189
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA+DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 190 IVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 247
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 248 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 276
>gi|242070573|ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
gi|241936406|gb|EES09551.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
Length = 282
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL + P YLTGE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 64 WYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 123
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L+Y GN I ++A+ A +
Sbjct: 124 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNS--IPINLVVAVIA-E 180
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 181 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 238
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
FF+QA VTG+GP+ENL H++DP NN
Sbjct: 239 LAFFIQAYVTGEGPVENLAKHLSDPFGNN 267
>gi|356559931|ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 289
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 141/209 (67%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE F+K + E+IH+RWA
Sbjct: 71 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWA 130
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y G P I I+A+ A +
Sbjct: 131 MLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKP--IPINLIVAVIA-E 187
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
+VL+G E YRI G E D L+PGG FDPLGLA+DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 188 IVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 245
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 246 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 274
>gi|255557841|ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223540996|gb|EEF42554.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 292
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 74 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 133
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L+Y GN I ++A+ A +
Sbjct: 134 MLGAAGFIVPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGNS--IPINLVVAVIA-E 190
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 191 VVLLGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAM 248
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 249 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 277
>gi|302143545|emb|CBI22106.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 132/233 (56%), Gaps = 90/233 (38%)
Query: 1 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR++V + S WYGPDR KYLGPFS ADPETFA
Sbjct: 1 MRKSVAKSKAVSSGSPWYGPDRVKYLGPFS-----------------------ADPETFA 37
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+LS+NGVKFGEAV
Sbjct: 38 KNRELEVIHCRWAMLGALGCVFPELLSRNGVKFGEAV----------------------- 74
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVK 176
+LMG VEGYRI GGPLGE VK
Sbjct: 75 -------------ILMGAVEGYRIAGGPLGE---------------------------VK 94
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 95 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 147
>gi|116785086|gb|ABK23587.1| unknown [Picea sitchensis]
Length = 303
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G P YL GE PGDYG+D GLS PE F K + E+IH+RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G IH I A+ A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGAS--IHINLIAAVVA-E 201
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR G E D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGLDFE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|914284|gb|AAB34068.1| light-harvesting complex b type 3, Lhcb3 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 132 aa]
Length = 132
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/132 (81%), Positives = 116/132 (87%), Gaps = 3/132 (2%)
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA 157
AQIFSEGGLDYLGNPNL+HAQSILA+ QV+LMG VEG+RI G P +GEG D LYPGG
Sbjct: 1 AQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLPGVGEGGD-LYPGGQ 59
Query: 158 -FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAN 216
FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVAN
Sbjct: 60 YFDPLGLADDPDTFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 119
Query: 217 NAWAYATNFVPG 228
NAW YAT FVPG
Sbjct: 120 NAWEYATKFVPG 131
>gi|397789264|gb|AFO67221.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
Length = 152
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/118 (84%), Positives = 108/118 (91%), Gaps = 3/118 (2%)
Query: 1 MRRTVK---SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+T K ++ S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAK
Sbjct: 35 MRKTGKKPVASSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 152
>gi|358248178|ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 146/234 (62%), Gaps = 17/234 (7%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
K+ +S WYG DRP++LGP S + PSYLTGE PGDYG+D AGL DP K E++H
Sbjct: 98 KARKESFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQDPVALQKYFNFEILH 157
Query: 66 SRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSIL 122
+RWAML ++G + PEIL G F E VW++ G LDYLG L A Q ++
Sbjct: 158 ARWAMLASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVV 217
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAE 172
I CQ +LM E R G E L+PL YPGGA FDPL L++DP+ F E
Sbjct: 218 VIAICQALLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEE 274
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
LKVKE+KNGRLAM + GF+VQA +TGKGP++NL DHI+DP NN + NF+
Sbjct: 275 LKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLLG-SLNFI 327
>gi|225459918|ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Vitis vinifera]
gi|147770824|emb|CAN76428.1| hypothetical protein VITISV_023565 [Vitis vinifera]
gi|297734735|emb|CBI16969.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 140/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P+YLTGE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 72 WYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 131
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I I A+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLIFAVVA-E 188
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA+DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 189 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAM 246
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 247 LGFFIQAYVTGEGPVENLAAHLSDPFGNN 275
>gi|115776|sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of LHCII type 1 protein;
AltName: Full=Chlorophyll a-b binding of LHCII type I
protein; Short=CAB; Short=LHCP
gi|21100|emb|CAA34640.1| chlorophyll a/b binding protein (124 AA) [Raphanus sativus]
Length = 124
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/124 (80%), Positives = 110/124 (88%), Gaps = 1/124 (0%)
Query: 107 LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG-GPLGEGLDPLYPGGAFDPLGLAD 165
LDYLGNP+L+HAQSILAIWA QV+LMG VEGYR+ G GPLGE D LYPGG+FDPL
Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLT 60
Query: 166 DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNF
Sbjct: 61 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 120
Query: 226 VPGK 229
VPGK
Sbjct: 121 VPGK 124
>gi|157267420|gb|ABV26426.1| light-harvesting chlorophyll a/b-binding protein [Camellia
sinensis]
Length = 153
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/124 (82%), Positives = 109/124 (87%), Gaps = 6/124 (4%)
Query: 1 MRRT----VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
MR+T V+S S WYGPDR YLGP S PSYLTGEFPGDYGWDTAGLSADPETF+
Sbjct: 32 MRKTGGKPVRSG--SPWYGPDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFS 89
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
KNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LI
Sbjct: 90 KNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLI 149
Query: 117 HAQS 120
HAQS
Sbjct: 150 HAQS 153
>gi|9719392|gb|AAF97781.1| chlorophyll a/b-binding protein [Picea glauca]
Length = 151
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 100/114 (87%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 97
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 114
LEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAG + G P
Sbjct: 98 LEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGRRYSRREASTTWGTPT 151
>gi|449447521|ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
gi|449510691|ref|XP_004163735.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
Length = 288
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE F K + E+IH+RWA
Sbjct: 70 WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWA 129
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I I+A+ A +
Sbjct: 130 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-E 186
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLADDPDQ A LKVKE+KNGRLAMF+M
Sbjct: 187 VVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAM 244
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 245 LGFYFQAYVTGEGPVENLAKHLSDPFGNN 273
>gi|116779208|gb|ABK21181.1| unknown [Picea sitchensis]
gi|116780325|gb|ABK21632.1| unknown [Picea sitchensis]
gi|116781512|gb|ABK22131.1| unknown [Picea sitchensis]
gi|116791342|gb|ABK25943.1| unknown [Picea sitchensis]
gi|116791754|gb|ABK26096.1| unknown [Picea sitchensis]
gi|148907198|gb|ABR16740.1| unknown [Picea sitchensis]
gi|224284432|gb|ACN39950.1| unknown [Picea sitchensis]
gi|224284582|gb|ACN40024.1| unknown [Picea sitchensis]
gi|224284686|gb|ACN40075.1| unknown [Picea sitchensis]
Length = 303
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G P YL GE PGDYG+D GLS PE F K + E+IH+RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR G E D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGLDFE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|224285421|gb|ACN40433.1| unknown [Picea sitchensis]
Length = 303
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G P YL GE PGDYG+D GLS PE F K + E+IH+RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 144
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIMPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR G E D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGLDFE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|168068372|ref|XP_001786046.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662227|gb|EDQ49143.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 139/211 (65%), Gaps = 9/211 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL ++ P+YLTGE PGDYG+D GLS PE F + + E+IH+RWA
Sbjct: 48 WYGPDRRIYLPEGLLAKDEIPAYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYELIHARWA 107
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVW+K GA + + Y G I+ + A +
Sbjct: 108 MLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPIN---LAAAVIAE 164
Query: 129 VVLMGFVEGYRIGGGPLG--EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMF 186
V+L+G E YR + + LD L+PGGAFDPLGLA DPDQFA LKVKE+KNGRLAMF
Sbjct: 165 VILVGGAEYYRSTNKDVYGLQDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIKNGRLAMF 224
Query: 187 SMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
SM GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 225 SMLGFFVQAYVTGEGPVENLAAHLSDPFGNN 255
>gi|1644289|emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
Length = 283
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 141/220 (64%), Gaps = 11/220 (5%)
Query: 4 TVKSAPQSI--WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
TV +A + WYGPDR +L G + P YL GE GDYG+D GL PE FAK
Sbjct: 54 TVSAANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKY 113
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE L+K G G EAVWFK GA + L Y G I
Sbjct: 114 QAFELIHARWAMLGAAGCIIPEALNKYGANCGPEAVWFKTGALLLDGNTLSYFGKN--IP 171
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+LA+ +VVL+G E YRI G E D L+PGG FDPL LA DP+Q A LKVKE
Sbjct: 172 INLVLAV-VGEVVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLDLAKDPEQGALLKVKE 228
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 229 IKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|224285677|gb|ACN40554.1| unknown [Picea sitchensis]
Length = 278
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G P YL GE PGDYG+D GLS PE F K + E+IH+RWA
Sbjct: 60 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYELIHARWA 119
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 120 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 176
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR G E D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 177 VILVGGAEYYRATNGLDFE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 234
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 235 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 263
>gi|428230868|gb|AFY99056.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 107
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/101 (95%), Positives = 99/101 (98%)
Query: 39 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 98
GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG
Sbjct: 7 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 66
Query: 99 AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 139
+QIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR
Sbjct: 67 SQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGLIEGYR 107
>gi|261351266|gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
Length = 287
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + + P YL GE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 69 WYGPDRRIFLPEGLLDKSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 128
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L Y G I +LA+ A +
Sbjct: 129 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLYYFGKN--IPINLVLAVIA-E 185
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 186 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSM 243
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 244 LGFFIQAYVTGQGPVENLAAHLSDPFGNN 272
>gi|449515811|ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like,
partial [Cucumis sativus]
Length = 149
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/113 (86%), Positives = 104/113 (92%), Gaps = 5/113 (4%)
Query: 6 KSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
KSA +S+ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Sbjct: 37 KSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 113
LEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 97 LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 149
>gi|168049357|ref|XP_001777130.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671573|gb|EDQ58123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 141/226 (62%), Gaps = 16/226 (7%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+S+WY RPK+LGP P +L GE PGDYG+D GLS DP F + E++H+RWA
Sbjct: 123 ESMWYREGRPKWLGPIPYDYPDHLQGEAPGDYGFDILGLSRDPTAFERYFNFEILHARWA 182
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL--IHAQSILAIWA 126
ML ALG V PE+L + GV+F E VW+K G LDYLG P L AQ IL I
Sbjct: 183 MLAALGVVIPELLDRFGGVQFSEPVWWKVGYAKLQGDTLDYLGIPGLHIAGAQGILVIAF 242
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVK 176
CQV+LM E R G E L+PL YPGGA FDPLGL D F +LKVK
Sbjct: 243 CQVILMLGPEYARYCG---IEALEPLGIFLPGDVNYPGGALFDPLGLTKDAAAFEDLKVK 299
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
E+KNGRLAM + GF+VQA+VT KGPI+NL+D + DP+ N +AYA
Sbjct: 300 EMKNGRLAMVAWLGFYVQALVTQKGPIDNLFDFLEDPLHQNLFAYA 345
>gi|168007695|ref|XP_001756543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692139|gb|EDQ78497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 132/199 (66%), Gaps = 5/199 (2%)
Query: 13 WYGPDRPKYLGPFSE--QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
+YGP+RP + GPF++ P YL GE+PGDYG D L+ P +A+ R E+++ RWAM
Sbjct: 25 YYGPNRPLWKGPFTKPKDVPEYLKGEYPGDYGCDIFKLARLPANYARLRTQELMNGRWAM 84
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LG GC+ PE+++ N E VWF GAQIFS+ G+DYLG P I+A S+ A+ Q +
Sbjct: 85 LGITGCLTPELINSNSTPGFEPVWFNTGAQIFSDAGIDYLGVPGFINAHSLFAVIVVQAL 144
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
LMG E RI P EG DP YPGG FDPLG + DP+ AELKVKE+KNGRLAM +M
Sbjct: 145 LMGLAEYARIKFVP--EGADPFYPGGKTFDPLGFSSDPEILAELKVKEIKNGRLAMMAMA 202
Query: 190 GFFVQAIVTGKGPIENLYD 208
G F Q VTG P++NL+D
Sbjct: 203 GLFAQGAVTGVSPLQNLHD 221
>gi|116783956|gb|ABK23158.1| unknown [Picea sitchensis]
Length = 303
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G P YL GE PGDYG+D GL PE F K + E+IH+RWA
Sbjct: 85 WYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLIKKPENFDKYQAYELIHARWA 144
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 145 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 201
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR G E D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 202 VILVGGAEYYRATNGLDFE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 259
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFFVQA VTG+GP+ENL H++DP NN
Sbjct: 260 LGFFVQAYVTGEGPVENLAAHLSDPFGNN 288
>gi|414884910|tpg|DAA60924.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 315
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 138/221 (62%), Gaps = 16/221 (7%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYG DRP++LGP P YLTGE+PGDYG+D AGL DP FA E++H RWA
Sbjct: 92 NSFWYGGDRPRWLGPVPYDYPEYLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWA 151
Query: 70 MLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWA 126
ML ALG V PE+L G V F E VW+K G LDYLG P A Q ++ I
Sbjct: 152 MLAALGVVVPELLDLFGLVHFVEPVWWKVGYAKLQGDNLDYLGIPGFRIAGGQGVVVIAI 211
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGG-AFDPLGLADDPDQFAELKVK 176
CQ +LM E R G E L+PL YPGG FDPLGL+ DP F +LKVK
Sbjct: 212 CQALLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGPLFDPLGLSKDPVAFEDLKVK 268
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
E+KNGRLAM + FGF++QA VTGKGP++NL +H++DP+ NN
Sbjct: 269 EIKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLSDPLNNN 309
>gi|115478412|ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
gi|50725078|dbj|BAD33211.1| putative chlorophyll a/b-binding protein [Oryza sativa Japonica
Group]
gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa Japonica Group]
Length = 321
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 144/228 (63%), Gaps = 18/228 (7%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R ++A S WYG +RP++LGP + P++LTGE+PGDYG+D AGL DP FA E
Sbjct: 93 RQARTA--SSWYGDERPRWLGPVPYEYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFE 150
Query: 63 VIHSRWAMLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--Q 119
++H RWAML ALG V PE+L G V F E VW+K G LDYLG P A Q
Sbjct: 151 ILHCRWAMLAALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQ 210
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQ 169
++ I CQ +LM E R G E L+PL YPGGA FDPLGL+ DP
Sbjct: 211 GVIVIAICQALLMVGPEYARYCG---IEALEPLGLYLPGDINYPGGALFDPLGLSKDPVA 267
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F +LKVKE+KNGRLAM + GF++QA VTGKGPI+NL +H++DP+ NN
Sbjct: 268 FEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNN 315
>gi|242044232|ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
gi|241923364|gb|EER96508.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
Length = 314
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 138/221 (62%), Gaps = 16/221 (7%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
S WYG DRP++LGP P +LTGE+PGDYG+D AGL DP FA E++H RWA
Sbjct: 91 NSFWYGGDRPRWLGPVPYDYPEHLTGEYPGDYGFDIAGLGRDPIAFANYFNFEILHCRWA 150
Query: 70 MLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWA 126
ML ALG V PE+L G V F E VW+K G LDYLG P A Q ++ I
Sbjct: 151 MLAALGVVIPELLDLFGLVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAI 210
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVK 176
CQ +LM E R G E L+PL YPGGA FDPLGL+ DP F +LKVK
Sbjct: 211 CQALLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGALFDPLGLSKDPVAFEDLKVK 267
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
E+KNGRLAM + GF++QA VTGKGP++NL +H++DP+ NN
Sbjct: 268 EIKNGRLAMVAWLGFYIQAAVTGKGPVQNLVEHLSDPLHNN 308
>gi|224127848|ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
gi|118487642|gb|ABK95646.1| unknown [Populus trichocarpa]
gi|222870973|gb|EEF08104.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
Length = 290
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YLTGE PGDYG+D GLS P+ F K + E+IH+RWA
Sbjct: 72 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWA 131
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I +LA+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 188
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E +RI G LG D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 189 VILVGGAEYFRITNG-LGFD-DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 246
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF QA VTG+GP+ENL H++DP NN
Sbjct: 247 LGFFFQAYVTGEGPVENLAKHLSDPFGNN 275
>gi|339716054|gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
Length = 279
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P+YL GE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 61 WYGPDRRIFLPDGLLDRSEVPAYLNGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWA 120
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I ++A+ A +
Sbjct: 121 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVVAVIA-E 177
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LK KE+KNGRLAMF+M
Sbjct: 178 VVLLGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAAILKAKEIKNGRLAMFAM 235
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 236 LGFFLQAYVTGEGPVENLSKHLSDPFGNN 264
>gi|125563122|gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indica Group]
Length = 321
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 143/228 (62%), Gaps = 18/228 (7%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R ++A S WYG +RP++LGP + P++LTGE+PGDYG+D AGL DP FA E
Sbjct: 93 RQARTA--SSWYGDERPRWLGPVPYEYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFE 150
Query: 63 VIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--Q 119
++H RWAML ALG V PE+L V F E VW+K G LDYLG P A Q
Sbjct: 151 ILHCRWAMLAALGVVVPELLDLFEVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQ 210
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQ 169
++ I CQ +LM E R G E L+PL YPGGA FDPLGL+ DP
Sbjct: 211 GVIVIAICQALLMVGPEYARYCG---IEALEPLGLYLPGDINYPGGALFDPLGLSKDPVA 267
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F +LKVKE+KNGRLAM + GF++QA VTGKGPI+NL +H++DP+ NN
Sbjct: 268 FEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNN 315
>gi|302856917|ref|XP_002959743.1| hypothetical protein VOLCADRAFT_85008 [Volvox carteri f.
nagariensis]
gi|300254465|gb|EFJ39192.1| hypothetical protein VOLCADRAFT_85008 [Volvox carteri f.
nagariensis]
Length = 179
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/118 (77%), Positives = 107/118 (90%), Gaps = 1/118 (0%)
Query: 13 WYGPDRPKYLGPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGP+R K+LGP+SE TP+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH+RWAML
Sbjct: 37 WYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 96
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
GALGCV P++LSKNGV+F EA+WFKAGAQIF EGGLDYLGN +L+HAQ+I+A ACQV
Sbjct: 97 GALGCVTPKLLSKNGVQFSEALWFKAGAQIFQEGGLDYLGNLSLVHAQNIVATLACQV 154
>gi|159475641|ref|XP_001695927.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
gi|12060444|dbj|BAB20613.1| CP26 [Chlamydomonas reinhardtii]
gi|158275487|gb|EDP01264.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 289
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 137/224 (61%), Gaps = 19/224 (8%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + + P YL GE GDYG+D GL DPET AK RE E++H+RWA
Sbjct: 52 WYGPDRKLFLPSGLYDRSEIPEYLNGELAGDYGYDPLGLGKDPETVAKYRENELLHARWA 111
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI--LAIWAC 127
ML A G + PE L NG WF+ GA++ + G L+Y P I + + A+ A
Sbjct: 112 MLAAAGILIPEGLQANGANIKGGTWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAV 171
Query: 128 QVVLMGFVEGYRIGG-GPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
+V LMG VE YR G GP G +GLDPLYPGG FDPLGLADDP+ EL
Sbjct: 172 EVGLMGAVEFYRRNGTGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQEL 231
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KVKE+KNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 232 KVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 275
>gi|449455655|ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 135/220 (61%), Gaps = 16/220 (7%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG +RP++LGP P YLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 111 SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAM 170
Query: 71 LGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWAC 127
L +LG + PEIL G F E +W++ G LDYLG P +L +Q ++ I C
Sbjct: 171 LASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 230
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKE 177
Q +LM E R G E L+PL YPGG FDPL L+ D F ELKVKE
Sbjct: 231 QAILMVGPEYARYCG---IEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKE 287
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAM + GF+ QA +TGKGP++NL DHIADP NN
Sbjct: 288 IKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNN 327
>gi|125533937|gb|EAY80485.1| hypothetical protein OsI_35663 [Oryza sativa Indica Group]
Length = 283
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE F+K + E+IH+RWA
Sbjct: 65 WYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ ++ A +
Sbjct: 125 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAE 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 LGFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|302796621|ref|XP_002980072.1| light-harvesting complex [Selaginella moellendorffii]
gi|302811558|ref|XP_002987468.1| light-harvesting complex [Selaginella moellendorffii]
gi|300144874|gb|EFJ11555.1| light-harvesting complex [Selaginella moellendorffii]
gi|300152299|gb|EFJ18942.1| light-harvesting complex [Selaginella moellendorffii]
Length = 271
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 135/209 (64%), Gaps = 10/209 (4%)
Query: 13 WYGPDRPKYL--GPFSEQ-TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYG R YL G P YLTGE PGDYG+D GLS P F K + E+IH+RWA
Sbjct: 58 WYGESRRIYLPEGILDRSDVPEYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 117
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G + G EAVWFK GA + G L+Y G I +LA+ A +
Sbjct: 118 MLGAAGFVIPEAFNKFGAQCGPEAVWFKTGALLLDGGTLNYFGAN--IPINLVLAVLA-E 174
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E YR GLD L+PGG FDPLGLA DPD FA LKVKE+KNGRLAMF+M
Sbjct: 175 VILVGGAEYYRSINN---LGLDRLHPGGPFDPLGLAKDPDNFALLKVKEIKNGRLAMFAM 231
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA TG+GP+ENL H++DP NN
Sbjct: 232 LGFFIQAYATGEGPVENLTTHLSDPFGNN 260
>gi|18958|emb|CAA44777.1| Precursor of CP29, core chlorophyll a/b binding (CAB) protein of
photosystem II (PSII) [Hordeum vulgare subsp. vulgare]
gi|326511355|dbj|BAJ87691.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|445122|prf||1908428A chlorophyll a/b-binding protein
Length = 286
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL G + P YL GE PGDYG+D GL PE FAK + E+IH+RWA
Sbjct: 68 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAFELIHARWA 127
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE L+K G G EAVWFK GA + L+Y GN I+ ++ +
Sbjct: 128 MLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LILAVVAE 184
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRITNGL--EFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNGRLAMFSM 242
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP ENL H++DP NN
Sbjct: 243 LGFFIQAYVTGEGPFENLCAHLSDPFGNN 271
>gi|115484899|ref|NP_001067593.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|62733869|gb|AAX95978.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|108864184|gb|ABA92338.2| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
gi|113644815|dbj|BAF27956.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|125576735|gb|EAZ17957.1| hypothetical protein OsJ_33501 [Oryza sativa Japonica Group]
gi|215692422|dbj|BAG87842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704351|dbj|BAG93785.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 138/209 (66%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE F+K + E+IH+RWA
Sbjct: 65 WYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ ++ A +
Sbjct: 125 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAE 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 LGFFIQAYVTGEGPVENLSKHLSDPFGNN 268
>gi|449525738|ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 136/220 (61%), Gaps = 16/220 (7%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG +RP++LGP P YLTGE PGDYG+D AGLS DP F K E++H+RWAM
Sbjct: 111 SSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARWAM 170
Query: 71 LGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWAC 127
L +LG + PEIL G F E +W++ G LDYLG P +L +Q ++ I C
Sbjct: 171 LASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAIC 230
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKE 177
Q +LM E R G E L+PL YPGG FDPL L+ D + F ELKVKE
Sbjct: 231 QAILMVGPEYARYCG---IEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKE 287
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAM + GF+ QA +TGKGP++NL +HIADP NN
Sbjct: 288 IKNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNN 327
>gi|93359558|gb|ABF13305.1| chloroplast chlorophyll a/b binding protein [Phaseolus vulgaris]
Length = 134
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/135 (77%), Positives = 111/135 (82%), Gaps = 3/135 (2%)
Query: 24 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILS 83
PFS QTPSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+ PE+L
Sbjct: 1 PFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLE 60
Query: 84 K-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG 142
K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ QVVLMG V G+RI G
Sbjct: 61 KWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVVGFRING 120
Query: 143 -GPLGEGLDPLYPGG 156
+GEG + LYPGG
Sbjct: 121 LDGVGEG-NNLYPGG 134
>gi|326498823|dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508330|dbj|BAJ99432.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 310
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 135/218 (61%), Gaps = 16/218 (7%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
WYG RP++LGP P +L GEFPGDYG+D AGL DP FA E++H RWAML
Sbjct: 90 WYGGARPRWLGPLRYDYPEHLAGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA 149
Query: 73 ALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWACQV 129
ALG V PE+L G V F E VW+K G LDYLG P A Q I+ I CQV
Sbjct: 150 ALGVVVPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGIIVIAICQV 209
Query: 130 VLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKELK 179
+LM E R G E L+PL YPGGA FDPLGL+ DP F E KVKE+K
Sbjct: 210 LLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGALFDPLGLSKDPVAFEEFKVKEIK 266
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + GF++QA VTGKGP++NL +H++DP+ NN
Sbjct: 267 NGRLAMVAWIGFYIQAAVTGKGPVQNLAEHLSDPLHNN 304
>gi|297839529|ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333487|gb|EFH63905.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 136/223 (60%), Gaps = 16/223 (7%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG +RP++ GP P YLTGE PGDYG+D AGL D TF K E++H+RWAM
Sbjct: 107 SKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAM 166
Query: 71 LGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWAC 127
L ALG + PE+L G F E VW++ G LDYLG P L A Q ++ I C
Sbjct: 167 LAALGALIPEVLDLTGAFHFAEPVWWRVGYSKLQGETLDYLGIPGLHVAGSQGVIVIAIC 226
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKE 177
QV+LM E R G E L+PL YPGG FDPL L++DP F +LKVKE
Sbjct: 227 QVLLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKE 283
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
+KNGRLAM + GF+ QA TGKGP++NL DH++DP+ NN A
Sbjct: 284 IKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLA 326
>gi|87313239|gb|ABD37916.1| light-harvesting chlorophyll-a/b binding protein Lhcb5
[Chlamydomonas incerta]
Length = 259
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 137/224 (61%), Gaps = 19/224 (8%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + + P YL GE GDYG+D GL DPET AK RE E++H+RWA
Sbjct: 22 WYGPDRKLFLPSGLYDRSEIPDYLNGELAGDYGYDPLGLGKDPETVAKYRENELLHARWA 81
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI--LAIWAC 127
ML A G + PE L NG WF+ GA++ + G L+Y P I + + A+ A
Sbjct: 82 MLAAAGILIPEGLQANGANIKGGTWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAV 141
Query: 128 QVVLMGFVEGYRI-GGGPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
+V LMG VE YR G GP G +GLDPLYPGG FDPLGLADDP+ EL
Sbjct: 142 EVGLMGAVEFYRRNGSGPAGYSPGIGKFDSSVFDGLDPLYPGGPFDPLGLADDPEVLQEL 201
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KVKE+KNGRLAM S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 202 KVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADPFGYN 245
>gi|160713963|gb|ABX47017.1| chloroplast chlorophyll a/b binding protein cab-PhE9 [Phyllostachys
edulis]
Length = 283
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS +P+ FA+ + E+IH+RWA
Sbjct: 65 WYGPDRRIFLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKNPDNFARYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ + +
Sbjct: 125 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPINLAVAVV---AE 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 182 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|77799163|gb|ABB03724.1| putative chloroplast chlorophyll A-B binding protein type II
[Sorghum bicolor]
Length = 113
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/102 (92%), Positives = 98/102 (96%)
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFS 187
QVVLMGFVEGYR+GGGPLGEGLD +YPGGAFDPLGLADDPD AELKVKELKNGRLAMFS
Sbjct: 12 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMFS 71
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
MFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPG
Sbjct: 72 MFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGN 113
>gi|110377793|gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 67 WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 126
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L+Y G I+ + +
Sbjct: 127 MLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAVV---AE 183
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 184 VVLLGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFAM 241
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTGKGP+ENL H++DP NN
Sbjct: 242 LGFFIQAYVTGKGPVENLAAHLSDPFGNN 270
>gi|15223108|ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative chlorophyll A-B binding protein; 65434-67056 [Arabidopsis
thaliana]
gi|332197739|gb|AEE35860.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 327
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 135/223 (60%), Gaps = 16/223 (7%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG +RP++ GP P YLTGE PGDYG+D AGL D TF K E++H+RWAM
Sbjct: 104 SKWYGKERPRWFGPIPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAM 163
Query: 71 LGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWAC 127
L ALG + PE+ G F E VW++ G L+YLG P L A Q ++ I C
Sbjct: 164 LAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAIC 223
Query: 128 QVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKE 177
QV+LM E R G E L+PL YPGG FDPL L++DP F +LKVKE
Sbjct: 224 QVLLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKE 280
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
+KNGRLAM + GF+ QA TGKGP++NL DH++DP+ NN A
Sbjct: 281 IKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIA 323
>gi|357157014|ref|XP_003577654.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YL GE PGDYG+D GLS P+ F K + E+IH+RWA
Sbjct: 68 WYGPDRRIFLPDGLLDRSEVPEYLNGEVPGDYGYDPFGLSKKPDDFTKYQAYELIHARWA 127
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ ++ +
Sbjct: 128 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LILAVVAE 184
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 242
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 243 LGFFIQAYVTGEGPVENLSAHLSDPFGNN 271
>gi|159147189|gb|ABW90989.1| LHCB5 [Phyllostachys edulis]
Length = 283
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YL GE PGDYG+D GLS +P+ FA+ + E+IH+RWA
Sbjct: 65 WYGPDRRIFLLEGLLDRSEVPEYLNGEVPGDYGYDPFGLSKNPDNFARYQAYELIHARWA 124
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ + +
Sbjct: 125 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPINLAVAVV---AE 181
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G EG L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF M
Sbjct: 182 VVLVGGAEYYRIINGLDLEG--KLHPGGPFDPLGLASDPDQAAPLKVKEIKNGRLAMFPM 239
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 240 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 268
>gi|302835678|ref|XP_002949400.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
gi|300265227|gb|EFJ49419.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
Length = 286
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/224 (49%), Positives = 136/224 (60%), Gaps = 19/224 (8%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + + P+YL GE GDYG+D GL D ET AK RE E++H+RWA
Sbjct: 49 WYGPDRVLFLPSGLYDRSEVPAYLNGELAGDYGYDPLGLGKDTETVAKYREYELLHARWA 108
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI--LAIWAC 127
ML A G + PE L NG VWF+ GA++ + G L+Y P I + + A+ A
Sbjct: 109 MLAAAGILIPEGLQANGANIKGGVWFETGAEMLNGGTLNYFAVPWGIVSNPLPLFAVIAI 168
Query: 128 QVVLMGFVEGYRIGG-GPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
+V LMG VE YR G GP G EGLD +YPGG FDPLGLADDP+ F EL
Sbjct: 169 EVGLMGAVEFYRRNGTGPAGYSPGIGKFDSSVFEGLDSIYPGGPFDPLGLADDPEVFQEL 228
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KVKE+KNGRLAM S+ F +Q+ VTG+GP N H+ DP N
Sbjct: 229 KVKEIKNGRLAMVSVLAFAIQSYVTGEGPYTNWIKHVQDPFGYN 272
>gi|357157898|ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Brachypodium distachyon]
Length = 318
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 135/218 (61%), Gaps = 16/218 (7%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
W+G RP++LGP P +L GEFPGDYG+D AGL DP FA E++H RWAML
Sbjct: 98 WFGEARPRWLGPIPYDYPEHLAGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA 157
Query: 73 ALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWACQV 129
ALG V PE+L G V F E VW+K G LDYLG L A Q ++ I CQ
Sbjct: 158 ALGVVIPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLGITGLRIAGGQGVIVIAICQA 217
Query: 130 VLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKELK 179
+LM E R G E L+PL YPGGA FDPLGL+ DP F ELKVKE+K
Sbjct: 218 LLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGALFDPLGLSKDPVGFEELKVKEIK 274
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + GF++QA VTGKGP++NL +H++DP+ NN
Sbjct: 275 NGRLAMVAWLGFYLQAAVTGKGPVQNLVEHLSDPLHNN 312
>gi|19184|emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
Length = 286
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 136/209 (65%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PG+YG+D GLS PE FAK + E+IH+RWA
Sbjct: 68 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGEYGYDPFGLSKKPEDFAKYQAYELIHARWA 127
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I+ ++ +
Sbjct: 128 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LILAVVAE 184
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 185 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSM 242
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 243 LGFFIQAYVTGQGPVENLAAHLSDPFGNN 271
>gi|108864186|gb|ABG22426.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 222
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Query: 15 GPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
GPDR +L + P YL GE PGDYG+D GLS PE F+K + E+IH+RWAML
Sbjct: 6 GPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAML 65
Query: 72 GALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
GA G + PE +K G G EAVWFK GA + L+Y GN I+ ++ A +VV
Sbjct: 66 GAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAEVV 122
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
L+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM G
Sbjct: 123 LVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLG 180
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANN 217
FF+QA VTG+GP+ENL H++DP NN
Sbjct: 181 FFIQAYVTGEGPVENLSKHLSDPFGNN 207
>gi|22750|emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris]
gi|1093837|prf||2104448A Lhcb5 gene
Length = 302
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GL PE F K + E+IH+RWA
Sbjct: 84 WYGPDRRIFLPEGLLDRDDIPEYLNGEVPGDYGYDPFGLGRKPENFDKYQAYELIHARWA 143
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + G L Y G I+ ++A +
Sbjct: 144 MLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPIN---LIAAVVAE 200
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YR G + D L+PGG FDPLGLA DPDQFA LKVKE+KNGRLAMFSM
Sbjct: 201 VVLVGGAEYYRATNGLNFD--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFSM 258
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 259 LGFFLQAYVTGEGPVENLAAHLSDPFGNN 287
>gi|297809249|ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
gi|297318345|gb|EFH48767.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE L+K G G EAVWFK GA + L+Y G I+ + +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVV---AE 178
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE+KNGRLAMF+M
Sbjct: 179 VVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAM 236
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 237 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|15235029|ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;
AltName: Full=LHCB5; AltName: Full=LHCIIc; AltName:
Full=Light-harvesting complex II protein 5; Flags:
Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein [Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|332657469|gb|AEE82869.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
Length = 280
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE L+K G G EAVWFK GA + L+Y G I+ + +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVV---AE 178
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE+KNGRLAMF+M
Sbjct: 179 VVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAM 236
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 237 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|21593520|gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE L+K G G EAVWFK GA + L+Y G I+ + +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVV---AE 178
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE+KNGRLAMF+M
Sbjct: 179 VVLLGGSEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAM 236
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 237 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>gi|149391069|gb|ABR25552.1| chloroplast chlorophyll a-b binding proteinr [Oryza sativa Indica
Group]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 130/191 (68%), Gaps = 6/191 (3%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P YL GE PGDYG+D GLS PE F+K + E+IH+RWAMLGA G + PE +K G
Sbjct: 1 EVPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEACNKFGA 60
Query: 88 KFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G EAVWFK GA + L+Y GN I+ ++ A +VVL+G E YRI G
Sbjct: 61 NCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAEVVLVGGAEYYRIINGLDL 117
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM GFF+QA VTG+GP+ENL
Sbjct: 118 E--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENL 175
Query: 207 YDHIADPVANN 217
H++DP NN
Sbjct: 176 SKHLSDPFGNN 186
>gi|22003726|gb|AAM88863.1|AF526508_1 A-B binding protein [Vicia faba]
Length = 136
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/93 (92%), Positives = 89/93 (95%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 34 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRE 93
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAV 93
LEVIHSRWAMLGALGC FPE+L KNGVKFGEA
Sbjct: 94 LEVIHSRWAMLGALGCTFPELLEKNGVKFGEAT 126
>gi|167997433|ref|XP_001751423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697404|gb|EDQ83740.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/101 (86%), Positives = 93/101 (92%)
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVLMG VEGYR+ GGPLGE DP+YPGG+FDPLGLADDPD FAELKVKE+KNGRLAMFSM
Sbjct: 144 VVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 203
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FGFFVQAIVTGKGP+ENL DH+ADPVANNAWAYATNF PG
Sbjct: 204 FGFFVQAIVTGKGPLENLNDHLADPVANNAWAYATNFTPGN 244
>gi|307106802|gb|EFN55047.1| hypothetical protein CHLNCDRAFT_35818 [Chlorella variabilis]
Length = 285
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 130/225 (57%), Gaps = 21/225 (9%)
Query: 13 WYGPDR----PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 68
WYGPDR P L E P L G PGDYG+D GL+ D ET +K + E++H+RW
Sbjct: 48 WYGPDRALFLPGGLMARDEINP-LLNGTLPGDYGYDPLGLAKDAETLSKYQANELLHARW 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWA 126
AML A G + PE L+ NG A WF+ GA + + G L++ P N+ + + + A
Sbjct: 107 AMLAAAGAIIPEGLAANGADVKGATWFETGAAMLNGGTLNWFAVPIANISNPLPLFVVVA 166
Query: 127 CQVVLMGFVEGYR-IGGGPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAE 172
V LMG E YR G GP G + +D LYPGG FDPLGLADDP+ AE
Sbjct: 167 ANVALMGAAENYRRTGEGPAGYSPGVGKFDESAYDSMDSLYPGGPFDPLGLADDPEVLAE 226
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
LKVKE+KNGRLAM S GF VQA VTG+GP N H+ADP N
Sbjct: 227 LKVKEIKNGRLAMVSFLGFAVQAAVTGEGPYANWSKHVADPFGYN 271
>gi|384251912|gb|EIE25389.1| putative chlorophyll a/b-binding protein [Coccomyxa subellipsoidea
C-169]
Length = 287
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/229 (48%), Positives = 137/229 (59%), Gaps = 9/229 (3%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
+ + +S WYG +RPK+LGP S P+YL G PGDY +D L+ D + F + E
Sbjct: 57 KELAAARDESPWYGEERPKWLGPLSYDYPAYLRGGAPGDYAYDPLQLAQDQDKFDQYFEF 116
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVK-FGEAVWFKAGAQIFSEGGLDYLGNPNLIHA-- 118
E++H+RWAMLGALG PEIL +GV F EA W+ G L+YLG L A
Sbjct: 117 ELLHARWAMLGALGAGIPEILQYSGVSDFLEARWWAVGGAKLQGEDLNYLGVSGLRIAGG 176
Query: 119 QSILAIWACQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGAFDPLGLADDPDQFAE 172
Q I I CQV+LM E R G PLG L D YPGG FDPLGL+ DP FA+
Sbjct: 177 QGIAIIAICQVLLMFGPEYARACGIEALEPLGLYLPGDKNYPGGLFDPLGLSKDPASFAD 236
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAY 221
L+VKE+KNGRLA+ + GF QA VT KGPI +L D ADPV NN +AY
Sbjct: 237 LQVKEIKNGRLALVAWVGFAAQAAVTRKGPIADLLDFAADPVHNNIFAY 285
>gi|125605083|gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japonica Group]
Length = 245
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 140/238 (58%), Gaps = 25/238 (10%)
Query: 2 RRTVKSAPQSIWYGPDRPKY---------LGPFSEQTPSYLTGEFPGDYGWDTAGLSADP 52
T + A ++ +G + K+ GP + P++LTGE+PGDYG+D AGL DP
Sbjct: 5 ESTCQRAFSAVLFGAEMSKFSTMRFDAEQKGPVPYEYPAHLTGEYPGDYGFDIAGLGRDP 64
Query: 53 ETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLG 111
FA E++H RWAML ALG V PE+L GV F E VW+K G LDYLG
Sbjct: 65 VAFANYFNFEILHCRWAMLAALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLG 124
Query: 112 NPNLIHA--QSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FD 159
P A Q ++ I CQ +LM E R G E L+PL YPGGA FD
Sbjct: 125 IPGFRIAGGQGVIVIAICQALLMVGPEYARYCGI---EALEPLGLYLPGDINYPGGALFD 181
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
PLGL+ DP F +LKVKE+KNGRLAM + GF++QA VTGKGPI+NL +H++DP+ NN
Sbjct: 182 PLGLSKDPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNN 239
>gi|255539358|ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 329
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 139/227 (61%), Gaps = 16/227 (7%)
Query: 4 TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 63
T K+ +S+WYG +RP++LGP P+YLTGE PGDYG+D AGLS D F + E+
Sbjct: 98 TAKARKESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEI 157
Query: 64 IHSRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QS 120
+H+RWAML ALG + PE+L +G F E VW++ G LDYLG P L A Q
Sbjct: 158 LHARWAMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQG 217
Query: 121 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGG-AFDPLGLADDPDQF 170
+L I CQ +LM E R G E L+PL YPGG FDPL L+ D
Sbjct: 218 VLVIAICQALLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVAL 274
Query: 171 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELKVKE+KNGRLAM + GF+ QA +TGKGP++NL +HI+DP NN
Sbjct: 275 EELKVKEIKNGRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNN 321
>gi|375152222|gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial [Lolium perenne]
Length = 206
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 127/201 (63%), Gaps = 16/201 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG-VK 88
P +L GEFPGDYG+D AGL DP FA E++H RWAMLGALG V PE+L G V
Sbjct: 3 PEHLDGEFPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLGALGVVVPELLDLFGIVH 62
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWACQVVLMGFVEGYRIGGGPLG 146
F E VW+K G LDYLG P L A Q I+ I CQ +LM E R G
Sbjct: 63 FVEPVWWKVGYAKLQGDTLDYLGIPGLRIAGGQGIIVIAICQALLMVGPEYARYCGI--- 119
Query: 147 EGLDPL---------YPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
E L+PL YPGGA FDPLGL+ DP F ELKVKE+KNGRLAM + GF+VQA
Sbjct: 120 EALEPLGIYLPGDLNYPGGALFDPLGLSKDPVAFEELKVKEIKNGRLAMVAWLGFYVQAA 179
Query: 197 VTGKGPIENLYDHIADPVANN 217
VTGKGP++NL +H++DP+ NN
Sbjct: 180 VTGKGPVQNLIEHLSDPLHNN 200
>gi|210162116|gb|ACJ09656.1| putative chloroplast light harvesting chlorophyll a/b binding
protein [Cupressus sempervirens]
Length = 169
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/183 (67%), Positives = 136/183 (74%), Gaps = 23/183 (12%)
Query: 1 MRRTVK---SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+ SA S WYGPDR YL P S + PSYLTGEFPGDY WDTA L ADPET AK
Sbjct: 6 MRKATTVSVSASTSPWYGPDRVLYLEP-SGEPPSYLTGEFPGDY-WDTARL-ADPET-AK 61
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
NRELEVIH R +MLGALGCV E+L++NGV EAVWF GAQI GLDYL P+L+H
Sbjct: 62 NRELEVIHCR-SMLGALGCV--ELLARNGVF--EAVWFN-GAQI--SVGLDYL--PSLVH 111
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AQSILAI +CQV+LMG VEGYRI GPLG DP+Y G+FDPL LADDPD FAELKV
Sbjct: 112 AQSILAI-SCQVILMGAVEGYRIASGPLGV-TDPIY-HGSFDPL-LADDPDAFAELKV-- 165
Query: 178 LKN 180
+KN
Sbjct: 166 IKN 168
>gi|384253873|gb|EIE27347.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 128/224 (57%), Gaps = 19/224 (8%)
Query: 13 WYGPDRPKYL--GPFS-EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGP R +L G P+YL G GDYG+D GL D T K R E+IH+RWA
Sbjct: 93 WYGPSRALFLPGGLLDPSDVPTYLNGTLAGDYGYDPLGLGKDTATVEKYRAYELIHARWA 152
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWAC 127
ML A G + PE L NG WF+ GA++ + G L+Y P + + + +
Sbjct: 153 MLAAAGIIIPEGLQANGAAIKGGTWFETGAEMLNGGTLNYFAVPWGIINNPLPLFLVVVI 212
Query: 128 QVVLMGFVEGYRIGG-GPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
+V L+G VE YR G GP G GLD LYPGG FDPLGLADDP+ FAEL
Sbjct: 213 EVALLGAVERYRQSGEGPPGYSPGVGKFDSSIFSGLDNLYPGGPFDPLGLADDPETFAEL 272
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KVKE+KNGRLA+ S+ GF VQ+ VTG+GP N H+ADP N
Sbjct: 273 KVKEIKNGRLALISVLGFAVQSYVTGEGPYANWSKHVADPFGYN 316
>gi|308154410|gb|ADO15273.1| light harvesting complex from photosystem I type b [Oxytropis
splendens]
Length = 97
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/97 (88%), Positives = 93/97 (95%)
Query: 55 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPN 114
FAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+
Sbjct: 1 FAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPS 60
Query: 115 LIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP 151
L+HAQSILAIWA QV+LMG VEGYRI GGPLGE +DP
Sbjct: 61 LVHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP 97
>gi|157965841|gb|ABW06957.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 562
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 131/206 (63%), Gaps = 11/206 (5%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
G RP + + P++LTGE+PGD G+D GL+ DPE FAKNR+ EV H RWAMLG +
Sbjct: 357 GEKRPTWFP--GAEAPAWLTGEYPGDRGFDPLGLAKDPEDFAKNRDSEVYHGRWAMLGLV 414
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
GC+ PE+ G+ A W++AGA + + G LDYLGNPNL+HA ++ I+ ++L
Sbjct: 415 GCLVPEVFGNLGIAQLPA-WYEAGA-VANTGSLDYLGNPNLVHASNVPLIFFTTLLLFLP 472
Query: 135 VEGYRIGGGPLGEGLD---PLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
+E +R G E YPGG FDPL L P ELK+KE+KNGRLAM MFGF
Sbjct: 473 IEAWRWNGQIAPEAKSAERTTYPGGPFDPLKLGASP----ELKLKEIKNGRLAMVGMFGF 528
Query: 192 FVQAIVTGKGPIENLYDHIADPVANN 217
+ Q+ VTG+GP+ NL H+ADP NN
Sbjct: 529 WAQSYVTGEGPLANLAAHLADPAHNN 554
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 127/206 (61%), Gaps = 11/206 (5%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
G RP + + P++LTGE+PGD G+D GL+ DP FAK R+ EV H RWAMLG +
Sbjct: 148 GEKRPTWFP--GAEAPTWLTGEYPGDRGFDPFGLAKDPADFAKFRDSEVFHGRWAMLGLV 205
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
GC+ PE+ G+ A W+ A A + + LDYLGNPNL+HA ++ I ++LMG
Sbjct: 206 GCLVPEVFGNLGIAQLPA-WYDA-ATVANTSNLDYLGNPNLVHASNVSFIALSTLLLMGP 263
Query: 135 VEGYRIGGGPLGEGLD---PLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
VE +R G E YPGG FDPL L P ELK+KE+KNGRLAM MFGF
Sbjct: 264 VEAWRWNGALASEAKSAERTTYPGGPFDPLKLGASP----ELKLKEIKNGRLAMVGMFGF 319
Query: 192 FVQAIVTGKGPIENLYDHIADPVANN 217
+ Q+ VTG+GP+ NL H+ADP NN
Sbjct: 320 WAQSYVTGEGPLANLAAHLADPAHNN 345
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Query: 79 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGY 138
PE+ G+ A W++AGA + + G LDYLGNPNL+HA ++ I+ ++L +E +
Sbjct: 1 PEVFGNLGIAQLPA-WYEAGA-VANTGSLDYLGNPNLVHASNVPLIFFTTLLLFLPIEAW 58
Query: 139 RIGG--GPLGEGLD-PLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQA 195
R G P + + YPGG FDPL L P ELK+KE+KNGRLAM MFGF+ Q+
Sbjct: 59 RWNGQIAPDAKSKEWTTYPGGPFDPLKLGASP----ELKLKEIKNGRLAMVGMFGFWAQS 114
Query: 196 IVTGKGPIENLYDHIADPVANN 217
VTG+GP+ NL H+ADP NN
Sbjct: 115 YVTGEGPLANLAAHLADPAHNN 136
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 153 YPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIA 211
YPG FDP GLA DP FA+ + E+ +GR AM + G V + G + + A
Sbjct: 168 YPGDRGFDPFGLAKDPADFAKFRDSEVFHGRWAMLGLVGCLVPEVFGNLGIAQLPAWYDA 227
Query: 212 DPVANNA 218
VAN +
Sbjct: 228 ATVANTS 234
>gi|305377034|dbj|BAJ15880.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 96
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 90/93 (96%)
Query: 52 PETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLG 111
PETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLG
Sbjct: 1 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 60
Query: 112 NPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP 144
NP+LIHAQSILAIWACQV+LMG VEGYRI GGP
Sbjct: 61 NPSLIHAQSILAIWACQVILMGAVEGYRIAGGP 93
>gi|225457685|ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/225 (49%), Positives = 139/225 (61%), Gaps = 16/225 (7%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
K+ +S+WYG +RP++LGP P+YLTGE PGDYG+D AGL DP F K E++H
Sbjct: 102 KAKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILH 161
Query: 66 SRWAMLGALGCVFPEILSKNGV-KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSIL 122
+RWAML ALG + PE+L G F E VW++ G LDYLG P A Q ++
Sbjct: 162 ARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVI 221
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGGA-FDPLGLADDPDQFAE 172
I CQ +LM E R G E L+PL YPGGA FDPL L+ DP F E
Sbjct: 222 VIAICQALLMVGPEYARYCG---IEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEE 278
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
LKVKE+KNGRLAM + GF++QA TGKGP++NL DH+ADP NN
Sbjct: 279 LKVKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNN 323
>gi|308154406|gb|ADO15271.1| light harvesting complex from photosystem I type b [Oxytropis
campestris subsp. johannensis]
gi|308154408|gb|ADO15272.1| light harvesting complex from photosystem I type b [Oxytropis
maydelliana]
gi|308154412|gb|ADO15274.1| light harvesting complex from photosystem I type b [Oxytropis
arctobia]
Length = 96
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 92/96 (95%)
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSL 60
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP 151
+HAQSILAIWA QV+LMG VEGYRI GGPLGE +DP
Sbjct: 61 VHAQSILAIWAVQVILMGAVEGYRIAGGPLGEVVDP 96
>gi|193872610|gb|ACF23033.1| ST140, partial [Eutrema halophilum]
Length = 141
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/107 (80%), Positives = 95/107 (88%), Gaps = 3/107 (2%)
Query: 1 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
MR+TV K S WYG DR KYLGPFS + PSYLTGEFPG+YGWDTAGLSADPETFA+
Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGNYGWDTAGLSADPETFAR 94
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 104
NRELEVIHSRWAMLGALGCVFPE+L++NGVKFG+AVWFKAG+QIFSE
Sbjct: 95 NRELEVIHSRWAMLGALGCVFPELLARNGVKFGKAVWFKAGSQIFSE 141
>gi|53793542|dbj|BAD52991.1| a/b-binding protein precursor-like [Oryza sativa Japonica Group]
Length = 98
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/98 (87%), Positives = 92/98 (93%)
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYRI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
>gi|16225450|gb|AAL15892.1|AF417304_1 putative chlorophyll-A-B-binding protein [Castanea sativa]
Length = 120
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/84 (98%), Positives = 83/84 (98%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFP DYGWDTAGLSADPETFAKNRE
Sbjct: 37 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPEDYGWDTAGLSADPETFAKNRE 96
Query: 61 LEVIHSRWAMLGALGCVFPEILSK 84
LEVIHSRWAMLGALGCVFPEILSK
Sbjct: 97 LEVIHSRWAMLGALGCVFPEILSK 120
>gi|159483767|ref|XP_001699932.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
gi|158281874|gb|EDP07628.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
Length = 399
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 134/218 (61%), Gaps = 12/218 (5%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
QS WYGP RP+ GP + +L G GD G+D GLS + +FAK +E E++H+RWA
Sbjct: 174 QSKWYGPSRPRLPGPLG--SAEHLIGAIAGDAGFDPLGLSKEQASFAKYQEAELLHARWA 231
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNP--NLIHAQSILAIWA 126
MLG +GC+ PE+L+ GV GE VW+K GA ++ S+ L++ G + Q I I A
Sbjct: 232 MLGVVGCLVPELLALRGVDLGEPVWWKVGASKLNSDLTLNWGGIEGFRIAGKQGIGLIAA 291
Query: 127 CQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKELK 179
CQ VLMG E R G P+G L D YPGG FDPL A D D F E VKE+K
Sbjct: 292 CQAVLMGGPEYARYVGIRSLEPVGVFLPGDQNYPGGGPFDPLNYAADADGFVEQAVKEVK 351
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM +M GFFVQA VT GP++N+ D +ADP NN
Sbjct: 352 NGRLAMLAMLGFFVQAAVTRVGPVQNVLDFVADPAHNN 389
>gi|89574390|gb|ABD77412.1| chloroplast chlorophyll a/b-binding protein [Zingiber officinale]
Length = 130
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/101 (84%), Positives = 95/101 (94%)
Query: 74 LGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
LGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG
Sbjct: 20 LGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMG 79
Query: 134 FVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELK 174
VEGYR+ GGPLGE +DPLYPGG+F+PLGLADDP+ FAE +
Sbjct: 80 AVEGYRVAGGPLGEVVDPLYPGGSFEPLGLADDPEAFAEAE 120
>gi|693924|gb|AAA80595.1| chlorophyll a/b binding protein, partial [Solanum tuberosum]
Length = 135
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/101 (85%), Positives = 93/101 (92%), Gaps = 2/101 (1%)
Query: 1 MRRTV-KSAPQSI-WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+ V KSAP S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA 99
RELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+
Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 135
>gi|118489770|gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 302
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 127/194 (65%), Gaps = 9/194 (4%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L G + P YLTGE PGDYG+D GLS P+ F K + E+IH+RWA
Sbjct: 72 WYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIHARWA 131
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I +LA+ A +
Sbjct: 132 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 188
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
V+L+G E +RI G LG D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMF+M
Sbjct: 189 VILVGGAEYFRITNG-LGFD-DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAM 246
Query: 189 FGFFVQAIVTGKGP 202
GFF+QA VTG P
Sbjct: 247 LGFFLQAYVTGDVP 260
>gi|108709620|gb|ABF97415.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 118
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/84 (97%), Positives = 84/84 (100%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRE
Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRE 94
Query: 61 LEVIHSRWAMLGALGCVFPEILSK 84
LEVIHSRWAMLGALGCVFPEILS+
Sbjct: 95 LEVIHSRWAMLGALGCVFPEILSR 118
>gi|333691283|gb|AEF79974.1| chloroplast minor chlorophyll a-b binding protein of photosystem II
[Dunaliella salina]
Length = 283
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 130/224 (58%), Gaps = 19/224 (8%)
Query: 13 WYGPDRPKYL--GPFS-EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGP+R +L G + P YL GE GDYG+D GL D E K R E++H+RWA
Sbjct: 46 WYGPERKLFLPGGLLDRDDVPEYLNGELAGDYGYDPLGLGKDEEQVEKYRANELLHARWA 105
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWAC 127
ML A G + PE L NG WF+ GA++ + G L+Y P + + + A+
Sbjct: 106 MLAAAGILIPEGLQANGADIKGGTWFETGAEMLNGGTLNYFAVPFGVVQNPLPLAAVTLI 165
Query: 128 QVVLMGFVEGYRIGG-GPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
++VL+G VE +R+ G GP G +GLD LYPGG FDPL LADDP+ FAEL
Sbjct: 166 EIVLLGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDQLYPGGPFDPLNLADDPEVFAEL 225
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+VKE KNGRLAM + F +Q+ VTG+GP N HI+DP N
Sbjct: 226 QVKETKNGRLAMVGVLAFAIQSYVTGEGPYANFTKHISDPFGYN 269
>gi|307110008|gb|EFN58245.1| hypothetical protein CHLNCDRAFT_34387 [Chlorella variabilis]
Length = 336
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 133/220 (60%), Gaps = 13/220 (5%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RR + QS W+G RP +LGP S Q P +L+GE PGDYGWD AGL DP + EL
Sbjct: 114 RRAARQ--QSPWFGAARPLWLGPLSTQPPQHLSGELPGDYGWDPAGLGRDPAKLDRYVEL 171
Query: 62 EVIHSRWAMLGALGCVFPEILSKNG-VKFGEAVWFKAG-AQIFSEGGLDYLGNPNLIHA- 118
E++H+RWAMLGALG V PE+L G F E W+ G A++ + L YLG P L A
Sbjct: 172 ELLHARWAMLGALGAVVPELLQLAGSATFLEDRWWNVGYAKLTTGEELAYLGVPGLRVAG 231
Query: 119 -QSILAIWACQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGG-AFDPLGLADDPDQF 170
Q + I CQV+LM E R G PLG L D YPGG FDPL L+ D +++
Sbjct: 232 GQGVAIIAFCQVLLMFGPEYARACGISALEPLGVFLPGDKNYPGGWLFDPLQLSGDAERY 291
Query: 171 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
++V+E+KNGRLAM + GF QA VT +GP++NL D +
Sbjct: 292 EAMRVREIKNGRLAMVAWLGFAAQAAVTRQGPVQNLLDAV 331
>gi|222641394|gb|EEE69526.1| hypothetical protein OsJ_28989 [Oryza sativa Japonica Group]
Length = 225
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 85/96 (88%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 42 SPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 101
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGG 106
LGALGCVFPE+L++NGVKFGEAVWFKAG+Q+ G
Sbjct: 102 LGALGCVFPELLARNGVKFGEAVWFKAGSQVLQGRG 137
>gi|302854487|ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|302854497|ref|XP_002958756.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
gi|300255926|gb|EFJ40207.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|300255931|gb|EFJ40212.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
Length = 98
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/96 (82%), Positives = 86/96 (89%)
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGF
Sbjct: 1 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 60
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
FVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 61 FVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 96
>gi|383145055|gb|AFG54073.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145056|gb|AFG54074.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145057|gb|AFG54075.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145058|gb|AFG54076.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145059|gb|AFG54077.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145060|gb|AFG54078.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145061|gb|AFG54079.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145062|gb|AFG54080.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145063|gb|AFG54081.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145064|gb|AFG54082.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145065|gb|AFG54083.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145066|gb|AFG54084.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145067|gb|AFG54085.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145068|gb|AFG54086.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145069|gb|AFG54087.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145070|gb|AFG54088.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145071|gb|AFG54089.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
gi|383145072|gb|AFG54090.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
Length = 83
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 82/83 (98%)
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIHSRWAMLGALGCVFPE+L+KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 60
Query: 116 IHAQSILAIWACQVVLMGFVEGY 138
IHAQSILAIWACQVVLMG +EGY
Sbjct: 61 IHAQSILAIWACQVVLMGLIEGY 83
>gi|375152320|gb|AFA36618.1| chlorophyll a/b binding protein, partial [Lolium perenne]
Length = 91
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/91 (87%), Positives = 86/91 (94%)
Query: 139 RIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT 198
RI GGPLGE +DPLYPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVT
Sbjct: 1 RIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 60
Query: 199 GKGPIENLYDHIADPVANNAWAYATNFVPGK 229
GKGP+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 61 GKGPLENLADHLADPVNNNAWAFATNFVPGK 91
>gi|361068309|gb|AEW08466.1| Pinus taeda anonymous locus CL14Contig4_03 genomic sequence
Length = 83
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/83 (93%), Positives = 81/83 (97%)
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 115
AKNRELEVIHSRWAMLGALGCVFPE+L+K GVKFGEAVWFKAGAQIFSEGGLDYLGNPNL
Sbjct: 1 AKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL 60
Query: 116 IHAQSILAIWACQVVLMGFVEGY 138
IHAQSILAIWACQVVLMG +EGY
Sbjct: 61 IHAQSILAIWACQVVLMGLIEGY 83
>gi|302849410|ref|XP_002956235.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
gi|300258538|gb|EFJ42774.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
Length = 276
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 133/226 (58%), Gaps = 12/226 (5%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYG RP+ GP +L GE GD G+D L DP FA+ RE+E++H+RWAM
Sbjct: 53 SKWYGASRPRLPGPLG--GAQHLNGEEAGDAGFDPLELGKDPGAFARFREVELLHARWAM 110
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHA--QSILAIWAC 127
LG +GC+ PE+L+ GV+ GE VW+K GA ++ S+ L++ G A Q I I AC
Sbjct: 111 LGFVGCMVPELLALRGVELGEPVWWKVGASKLNSDLTLNWGGIEGFRIAGKQGIGLIAAC 170
Query: 128 QVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKELKN 180
Q VLMG E R G P+G L D YPGG FDPL A D D F + V+E+KN
Sbjct: 171 QAVLMGGPEYARYVGIRSLEPVGVFLPGDQNYPGGGPFDPLNYAADADGFVDQAVREIKN 230
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
GRLAM +M G FVQA VT KGP++N+ + ++DP N + +
Sbjct: 231 GRLAMVAMLGLFVQAAVTKKGPVQNVMEFVSDPAGENIFTNVARLL 276
>gi|2570511|gb|AAB82141.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 304
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+ +WYGPDR YLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWA
Sbjct: 45 KELWYGPDRVNYLGPFSAQTPSYLRGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWA 104
Query: 70 MLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGALGC+ PE+L K V F + + + P ++ W +
Sbjct: 105 MLGALGCITPEVLEKWVRVHFKDPCGSRPAPKSSPTAASTTSATPTWCTPRASSPCWDSK 164
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFS 187
G P G P A P+GL P ++V+ + L S
Sbjct: 165 SP-HGSRPRLPHQRPPRRLGEQRALPRRAVLRPVGLRGGPRNLCGVQVQGDQECPLRQCS 223
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F IVTGKGP+ENL DH ADPVA
Sbjct: 224 PCWVFCPGIVTGKGPLENLLDHFADPVAKT 253
>gi|339716018|gb|AEJ88256.1| putative light harvesting chlorophyll a/b-binding protein [Wolffia
australiana]
Length = 92
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 85/92 (92%)
Query: 138 YRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV 197
YR+ GGPLGE +DPLYPGG+FDPL LA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIV
Sbjct: 1 YRVAGGPLGEVVDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 60
Query: 198 TGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
TGKGP+ENL DH+ADPV NNAWAYATNFVPG
Sbjct: 61 TGKGPLENLADHLADPVNNNAWAYATNFVPGN 92
>gi|145078729|tpg|DAA05882.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Euglena gracilis]
Length = 244
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 100/141 (70%), Gaps = 1/141 (0%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGP+R +LGP S+ P +L GE PGDYG+D GL+ P + R+ E+I+ RWAM
Sbjct: 102 SDWYGPNRKLFLGPLSDGAPEHLKGELPGDYGFDVLGLATQPTRLERYRQGEIINGRWAM 161
Query: 71 LGALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LG +GC+ PE+L++N GV F E VWFK GA +FSE GL+YLGNP+LIHA+SI AI ++
Sbjct: 162 LGIVGCIVPELLARNYGVPFPEPVWFKTGATVFSEEGLNYLGNPSLIHAKSIAAILVTEI 221
Query: 130 VLMGFVEGYRIGGGPLGEGLD 150
+ +G E +R+ GGPLG D
Sbjct: 222 LFVGAAEAFRVSGGPLGPATD 242
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 57/80 (71%)
Query: 142 GGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
GGPLG D +YPG AFDPLGL+ D FAELKVKE+KNGRLAM M G F+Q TGKG
Sbjct: 1 GGPLGPATDLVYPGKAFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATGKG 60
Query: 202 PIENLYDHIADPVANNAWAY 221
P++NL DH+ADP N +
Sbjct: 61 PLQNLADHLADPTGANIITF 80
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 37 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG--VKFGEAVW 94
+PG +D GLS D FA+ + EV + R AMLG LG + G + +
Sbjct: 12 YPGK-AFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATGKGPLQNLADHLA 70
Query: 95 FKAGAQI--FSEGGLDYLGNPNLIHAQ-SILAIWACQVVLMGFVEGYRIGGGPLGEG--- 148
GA I F + L LG + A L+ W + ++ GPL +G
Sbjct: 71 DPTGANIITFHQRVLSDLGGVAMFAATGEKLSDW--------YGPNRKLFLGPLSDGAPE 122
Query: 149 -LDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV 197
L PG FD LGLA P + + E+ NGR AM + G V ++
Sbjct: 123 HLKGELPGDYGFDVLGLATQPTRLERYRQGEIINGRWAMLGIVGCIVPELL 173
>gi|169261108|gb|ACA52202.1| chloroplast chlorophyll A/B-binding protein [Oenothera grandiflora]
Length = 118
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 5/98 (5%)
Query: 1 MRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+T A ++ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 21 MRKTAGKAKPAVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 80
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAV 93
AKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAV
Sbjct: 81 AKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAV 118
>gi|209778997|gb|ACI87809.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 85
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/85 (91%), Positives = 81/85 (95%)
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
L EGLDPLYPGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 1 LAEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 60
Query: 205 NLYDHIADPVANNAWAYATNFVPGK 229
NLYDH+ADP NNAWAYATNFVPGK
Sbjct: 61 NLYDHLADPSTNNAWAYATNFVPGK 85
>gi|302854499|ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
gi|300255932|gb|EFJ40213.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
Length = 112
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 7/110 (6%)
Query: 125 WACQVVLMGFV-------EGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
AC + ++ V GYR+ GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE
Sbjct: 1 MACCISVLTAVFSPALAAHGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKE 60
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+A+P NNA+A+AT F P
Sbjct: 61 IKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNNAFAFATKFTP 110
>gi|87313189|gb|ABD37891.1| light-harvesting chlorophyll-a/b binding protein Lhcb5 [Mesostigma
viride]
Length = 280
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 13 WYGPDRPKYL--GPFS-EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDRPKYL G P+Y+ GE GDYG+D GL + K R EV+H RWA
Sbjct: 58 WYGPDRPKYLPTGLLDPADIPAYMNGELAGDYGYDPLGL-GNKGGVEKYRPYEVLHGRWA 116
Query: 70 MLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFS-EGGLDYLGNPNLIHAQSILAIWAC 127
MLG +G + PE L NG AVW+ +GA + L + G PN + LA+
Sbjct: 117 MLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNPVPLA--LAV-IF 173
Query: 128 QVVLMGFVEGYRIG-GGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAM 185
+V + +E YR GP G GLDPLYPGG FDPLGLA DP + ELKVKE+KNGRLAM
Sbjct: 174 EVAVFFLIENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAM 233
Query: 186 FSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+ GF VQ VT +GP N H+ADP N
Sbjct: 234 MAFLGFVVQYFVTKEGPYANWSKHLADPFGYN 265
>gi|145079746|tpg|DAA05928.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Mesostigma viride]
Length = 287
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 122/212 (57%), Gaps = 11/212 (5%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDRPKYL P+Y+ GE GDYG+D GL + K R EV+H RWA
Sbjct: 65 WYGPDRPKYLPTGLLDPADIPAYMNGELAGDYGYDPLGL-GNKGGVEKYRPYEVLHGRWA 123
Query: 70 MLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFS-EGGLDYLGNPNLIHAQSILAIWAC 127
MLG +G + PE L NG AVW+ +GA + L + G PN + LA+
Sbjct: 124 MLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNPVPLA--LAV-IF 180
Query: 128 QVVLMGFVEGYRIG-GGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAM 185
+V + +E YR GP G GLDPLYPGG FDPLGLA DP + ELKVKE+KNGRLAM
Sbjct: 181 EVAVFFLIENYRYQQDGPWGTGLDPLYPGGKYFDPLGLASDPSKADELKVKEIKNGRLAM 240
Query: 186 FSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+ GF VQ VT +GP N H+ADP N
Sbjct: 241 MAFLGFVVQYFVTKEGPYANWSKHLADPFGYN 272
>gi|15487754|gb|AAL00920.1|AF398742_1 ASCAB9 [Centromadia pungens]
Length = 171
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487728|gb|AAL00907.1|AF398729_1 ASCAB9-A [Dubautia raillardioides]
Length = 171
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 110/160 (68%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G IH
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKN--IH 59
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
++A+ A V++ G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 60 INLVVAVVAEVVLVGG-AEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487738|gb|AAL00912.1|AF398734_1 ASCAB9-C [Argyroxiphium sandwicense]
gi|15487744|gb|AAL00915.1|AF398737_1 ASCAB9-C [Dubautia laxa]
Length = 171
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
++ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 ---LVVAVVTEVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487716|gb|AAL00901.1|AF398723_1 ASCAB9-A [Argyroxiphium caliginis]
gi|15487720|gb|AAL00903.1|AF398725_1 ASCAB9-A [Dubautia laevigata]
gi|15487726|gb|AAL00906.1|AF398728_1 ASCAB9-A [Dubautia plantaginea]
gi|15487730|gb|AAL00908.1|AF398730_1 ASCAB9-A [Dubautia sherffiana]
gi|15487732|gb|AAL00909.1|AF398731_1 ASCAB9-A [Wilkesia gymnoxiphium]
gi|15487734|gb|AAL00910.1|AF398732_1 ASCAB9-B [Argyroxiphium caliginis]
gi|15487736|gb|AAL00911.1|AF398733_1 ASCAB9-B [Argyroxiphium sandwicense]
gi|15487740|gb|AAL00913.1|AF398735_1 ASCAB9-B [Dubautia laevigata]
gi|15487742|gb|AAL00914.1|AF398736_1 ASCAB9-C [Dubautia latifolia]
gi|15487746|gb|AAL00916.1|AF398738_1 ASCAB9-B [Dubautia plantaginea]
gi|15487748|gb|AAL00917.1|AF398739_1 ASCAB9-C [Dubautia scabra]
gi|15487750|gb|AAL00918.1|AF398740_1 ASCAB9-B [Wilkesia gymnoxiphium]
gi|15487758|gb|AAL00922.1|AF398744_1 ASCAB9 [Harmonia nutans]
gi|15487760|gb|AAL00923.1|AF398745_1 ASCAB9 [Osmadenia tenella]
gi|15487764|gb|AAL00925.1|AF398747_1 ASCAB9 [Anisocarpus scabridus]
gi|156046244|gb|ABU42590.1| ASCAB9 [Dubautia arborea]
gi|156046246|gb|ABU42591.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487752|gb|AAL00919.1|AF398741_1 ASCAB9-C [Wilkesia gymnoxiphium]
Length = 171
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|302844283|ref|XP_002953682.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
gi|300261091|gb|EFJ45306.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
Length = 143
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 81/98 (82%)
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
++LMG VEGYR+ G P GEGLDPLY G +FDPLGLADDPD F EL VKE KNGRLAMFSM
Sbjct: 43 MILMGLVEGYRVNGSPAGEGLDPLYHGESFDPLGLADDPDTFTELMVKETKNGRLAMFSM 102
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
FGFF+QAIVTG PIENL DH+A+P NNA+A+AT V
Sbjct: 103 FGFFMQAIVTGNDPIENLNDHLANPGVNNAFAFATKLV 140
>gi|15487724|gb|AAL00905.1|AF398727_1 ASCAB9-A [Dubautia laxa]
Length = 171
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF++A VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNN 156
>gi|156046250|gb|ABU42593.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+ H+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|156046252|gb|ABU42594.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+ H+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHMSDPFGNN 156
>gi|156046248|gb|ABU42592.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+E+L H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVESLASHLSDPFGNN 156
>gi|15487722|gb|AAL00904.1|AF398726_1 ASCAB9-A [Dubautia latifolia]
Length = 171
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G IH
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKN--IH 59
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
++A+ A V++ G E YRI G E D L+ GG FDPLGLA DPDQFA LKVKE
Sbjct: 60 INLVVAVVAEVVLVGG-AEYYRIINGLDLE--DKLHHGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNN 156
>gi|15487762|gb|AAL00924.1|AF398746_1 ASCAB9 [Carlquistia muirii]
Length = 171
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA V G+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVAGQGPVENLASHLSDPFGNN 156
>gi|15487756|gb|AAL00921.1|AF398743_1 ASCAB9 [Deinandra lobbii]
Length = 171
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF+QA VTG+ P+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIQAYVTGQCPVENLASHLSDPFGNN 156
>gi|193875802|gb|ACF24537.1| light harvesting complex protein LHCII-2 [Gymnochlora stellata]
Length = 248
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Query: 13 WYGPDRPKYL-GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
WYGPDRPK+L F P YLTGE+PGDYGWD GLSADP+ FA RE E++H+RWAML
Sbjct: 120 WYGPDRPKWLPDAFLAGVPDYLTGEYPGDYGWDALGLSADPQNFANYREAELLHARWAML 179
Query: 72 GALGCVFPEILSK--NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
GALGCVFPE+++ NG E VW+KAGA + + +DYLG+ IHA SI+AI QV
Sbjct: 180 GALGCVFPEVINSYYNG-NIAEPVWWKAGALVLNGQSIDYLGSDKFIHASSIIAIAGAQV 238
Query: 130 VLMGFVE 136
VLMG E
Sbjct: 239 VLMGGAE 245
>gi|15487718|gb|AAL00902.1|AF398724_1 ASCAB9-A [Argyroxiphium sandwicense]
Length = 171
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA GC+ PE +K G G EAVWFK A + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTRALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DPDQFA LKVKE
Sbjct: 62 LVVAVVA---EVVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAMFSMF FF++A VTG+GP+ENL H++DP NN
Sbjct: 117 IKNGRLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNN 156
>gi|308809197|ref|XP_003081908.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
gi|63029305|gb|AAY27551.1| chloroplast Lhcq-like protein precursor [Ostreococcus tauri]
gi|116060375|emb|CAL55711.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
Length = 242
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 125/208 (60%), Gaps = 11/208 (5%)
Query: 10 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
+S +YG +R K+LG + P++L G GD G+D L+A E + RELE++H RWA
Sbjct: 28 RSAFYGANRVKFLGDLEYEYPAHLDGTLCGDVGFDPLNLAAKSEDLERYRELELLHGRWA 87
Query: 70 MLGALGCVFPEILSKNGV-KFGEAVWFKAG-AQIFSEGGLDYLGNP--NLIHAQSILAIW 125
MLG +G PE L + GV GE VW+K G A++ S+ LDYLG ++ I I
Sbjct: 88 MLGVVGAAVPETLDRFGVANLGEPVWWKVGAAKMNSDIALDYLGFSGFHIAGGSGIAVIA 147
Query: 126 ACQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKEL 178
ACQ+VLMG E R G P+G L D YPGGA FDP +DD ++F + KV E+
Sbjct: 148 ACQLVLMGGPEYARYVGINSLEPVGVYLPGDKDYPGGAPFDPFKFSDDAEEFEKQKVMEI 207
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENL 206
K+ RLAM + G +QAIVT +GPIENL
Sbjct: 208 KHCRLAMIAALGCAIQAIVTRQGPIENL 235
>gi|302854495|ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
gi|300255930|gb|EFJ40211.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
Length = 88
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/86 (83%), Positives = 78/86 (90%)
Query: 142 GGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
GGP GEGLDPLYPG +FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 1 GGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 60
Query: 202 PIENLYDHIADPVANNAWAYATNFVP 227
PIENL DH+A+P NNA+A+AT F P
Sbjct: 61 PIENLNDHLANPAVNNAFAFATKFTP 86
>gi|192764699|gb|ACF05893.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764701|gb|ACF05894.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764703|gb|ACF05895.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764707|gb|ACF05897.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764709|gb|ACF05898.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764711|gb|ACF05899.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764713|gb|ACF05900.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764715|gb|ACF05901.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764717|gb|ACF05902.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764719|gb|ACF05903.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764721|gb|ACF05904.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764723|gb|ACF05905.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764727|gb|ACF05907.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764729|gb|ACF05908.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764731|gb|ACF05909.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764733|gb|ACF05910.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764735|gb|ACF05911.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764737|gb|ACF05912.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764739|gb|ACF05913.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764741|gb|ACF05914.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764743|gb|ACF05915.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764745|gb|ACF05916.1| chloroplast light-harvesting complex II protein [Populus tremula]
Length = 111
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 90/112 (80%), Gaps = 4/112 (3%)
Query: 63 VIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
VIH RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSI
Sbjct: 1 VIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSI 60
Query: 122 LAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFA 171
LA+ QVVLMG VEG+RI G P +GEG D LYPGG FDPLGLADDP FA
Sbjct: 61 LAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFA 111
>gi|351066141|gb|AEQ39045.1| putative light-harvesting complex II chlorophyll-a/b binding
protein [Wolffia arrhiza]
Length = 84
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/84 (84%), Positives = 77/84 (91%)
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
GE DPLYPGG+FDPL LA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+EN
Sbjct: 1 GEVTDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 60
Query: 206 LYDHIADPVANNAWAYATNFVPGK 229
L DH+ADPV NNAWAYATNFVPG
Sbjct: 61 LADHLADPVNNNAWAYATNFVPGN 84
>gi|154357560|gb|ABS78804.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA G + PE L+K G G EAVWFK GA + L+Y G I
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 59
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+LA+ A +VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE
Sbjct: 60 INLVLAVIA-EVVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
+KNGRLAMF+M GFF+QA VTG+GP+ENL H+
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|168068370|ref|XP_001786045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662226|gb|EDQ49142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 104/158 (65%), Gaps = 5/158 (3%)
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E+IH+RWA+L A G V P +K G G EA+W+K GA + + Y G I+
Sbjct: 38 ELIHARWAILRAAGFVPPNAFNKFGSVCGPEAMWWKTGALLLEGDSIKYFGATVPIN--- 94
Query: 121 ILAIWACQVVLMGFVEGYR-IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELK 179
+ A +V L+G E YR PLG LD L+PGGAFDPLGLA DPDQFA LKVKE+
Sbjct: 95 LAAAVISEVNLVGGSEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALLKVKEIM 154
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAMFSM GFFV+A VTG+GP+ENL H++DP NN
Sbjct: 155 NGRLAMFSMLGFFVKAYVTGEGPVENLAAHLSDPFGNN 192
>gi|145351847|ref|XP_001420273.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144580507|gb|ABO98566.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 122/207 (58%), Gaps = 13/207 (6%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S YG R K+LG + P++L G GD G+D GL D + RELE++H+RWAM
Sbjct: 155 SSLYGARRVKFLGDAEYEYPAHLDGSLCGDAGFDPLGLGKD--DLPRMRELELLHARWAM 212
Query: 71 LGALGCVFPEILSKNGV-KFGEAVWFKAGA-QIFSEGGLDYLGNP--NLIHAQSILAIWA 126
LG +G PE+L + GV GE VW+K GA ++ S+ LDY G ++ I I A
Sbjct: 213 LGIVGVAVPELLERYGVADLGEPVWWKVGAAKMNSDVSLDYFGLQGFHIAGGSGIAIIAA 272
Query: 127 CQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKELK 179
CQVVLMG E R G P+G L D YPGGA FDP ++DD D+F + KV E+K
Sbjct: 273 CQVVLMGGPEYARYVGIDSLEPVGVYLPGDKDYPGGAPFDPFKISDDADEFEKQKVMEIK 332
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENL 206
+GRLAM +M G QA VT GPIENL
Sbjct: 333 HGRLAMIAMLGVAAQAFVTRAGPIENL 359
>gi|192764705|gb|ACF05896.1| chloroplast light-harvesting complex II protein [Populus tremula]
gi|192764725|gb|ACF05906.1| chloroplast light-harvesting complex II protein [Populus tremula]
Length = 111
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 89/112 (79%), Gaps = 4/112 (3%)
Query: 63 VIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
VIH RWAMLGALGC+ PE+L K V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSI
Sbjct: 1 VIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSI 60
Query: 122 LAIWACQVVLMGFVEGYRIGGGP-LGEGLDPLYPGGA-FDPLGLADDPDQFA 171
LA+ QVVLMG VEG RI G P +GEG D LYPGG FDPLGLADDP FA
Sbjct: 61 LAVLGFQVVLMGLVEGSRINGLPGVGEGND-LYPGGQYFDPLGLADDPATFA 111
>gi|449527137|ref|XP_004170569.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like,
partial [Cucumis sativus]
Length = 79
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 75/79 (94%)
Query: 151 PLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
P+YPGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+
Sbjct: 1 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 60
Query: 211 ADPVANNAWAYATNFVPGK 229
DPV NNAWAYATNFVPGK
Sbjct: 61 TDPVNNNAWAYATNFVPGK 79
>gi|1262849|gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 95
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/84 (85%), Positives = 75/84 (89%)
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
G G P P G+FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIEN
Sbjct: 12 GRGDRPHLPRGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIEN 71
Query: 206 LYDHIADPVANNAWAYATNFVPGK 229
L DH+ADPV NNAWAYATNFVPGK
Sbjct: 72 LADHLADPVNNNAWAYATNFVPGK 95
>gi|223949713|gb|ACN28940.1| unknown [Zea mays]
Length = 159
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/149 (57%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G V PE +K G G EAVWFK GA + L Y GN I ++A+ A +
Sbjct: 1 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNS--IPINLVVAVIA-E 57
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 58 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSM 115
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
F FF+QA VTG+GP+ENL H++DP NN
Sbjct: 116 FAFFIQAYVTGEGPVENLAKHLSDPFGNN 144
>gi|210162154|gb|ACJ09675.1| putative chlorophyll a/b-binding protein [Cupressus sempervirens]
Length = 129
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 92/124 (74%), Gaps = 8/124 (6%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
WY DR YL P SE PSYLTGEF DYG DTA S D ET AKNRELEVIHSR +ML
Sbjct: 14 WYEQDRVLYLTPMSEP-PSYLTGEFTSDYGCDTAS-STDTETCAKNRELEVIHSR-SMLS 70
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
AL CV L+ GV EAVWF AGA +FSEGGLDYLG+ +LIHAQSILAIWACQV+LM
Sbjct: 71 ALRCVVA--LATYGVSIVEAVWF-AGA-LFSEGGLDYLGS-SLIHAQSILAIWACQVILM 125
Query: 133 GFVE 136
G VE
Sbjct: 126 GAVE 129
>gi|303281804|ref|XP_003060194.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
gi|226458849|gb|EEH56146.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
Length = 391
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 117/209 (55%), Gaps = 16/209 (7%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S YG RP L P P +LTG GD G+D L PE+ A+ ELE++H+RWAM
Sbjct: 171 SPLYGEARP--LLPGISSPPPHLTGTLAGDRGFDPLRLGKTPESLARGVELELLHARWAM 228
Query: 71 LGALGCVFPEILS-----KNGVKFGEAVWFKAGAQIFSEGGLDY--LGNPNLIHAQSILA 123
L +G PE LS G E VW+K GA + L+Y LG + Q +
Sbjct: 229 LAVVGVAVPEALSIAGALPEGAALAEPVWWKVGAAKLNGESLNYGGLGGFVIAGKQGVAV 288
Query: 124 IWACQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVK 176
I ACQ VLMG E R G P+G L D YPGGA FDP GL+DD D+FA KV
Sbjct: 289 IAACQAVLMGGPEYARYVGIRSLEPVGVYLPGDANYPGGAPFDPFGLSDDADRFARQKVI 348
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
E+++GRLAM +M G F QAIVTG+GP+ N
Sbjct: 349 EIEHGRLAMVAMLGCFAQAIVTGEGPVAN 377
>gi|115769|sp|P12327.1|CB21_EUGGR RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|829262|emb|CAA29821.1| chlorophyll a/b protein (128 AA) [Euglena gracilis]
Length = 127
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 86/117 (73%), Gaps = 4/117 (3%)
Query: 115 LIHAQSILAIWACQVVLMGFVEGYRIGG---GPLGEGLDPLYPGGAFDPLGLADDPDQFA 171
LIHA+S+LAI A QV+LMG VEGYR G G GE LD LYPGG FDPLGLADDPD F
Sbjct: 5 LIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFP 64
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAW-AYATNFVP 227
ELKVKE+KNGRLAM M GF+ QAIVTG+GP+EN H+ DP A+N A T F P
Sbjct: 65 ELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>gi|145079397|tpg|DAA05913.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Acetabularia acetabulum]
Length = 245
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 103/182 (56%), Gaps = 19/182 (10%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGP R +L P+YLTG+ GDYG+D GL DPE K R E+IH+RWA
Sbjct: 64 WYGPSRVLFLPSGLLERSDVPAYLTGDLAGDYGYDPLGLGKDPEQVQKYRAFELIHARWA 123
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ--SILAIWAC 127
ML A G + PE L+ NG A WF+ GA++ + G L+Y P I + + AI A
Sbjct: 124 MLAAAGMIIPEGLAANGADIKGATWFETGAEMLNGGTLNYFAVPWAIVSNPLPLFAIVAV 183
Query: 128 QVVLMGFVEGY-RIGGGPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAEL 173
+V LMG E Y R G GP G +GLD L+PGG FDPLGLADDP+ F EL
Sbjct: 184 EVGLMGAAENYRRTGTGPKGYSPGVGNFESSVFDGLDSLHPGGPFDPLGLADDPEVFQEL 243
Query: 174 KV 175
KV
Sbjct: 244 KV 245
>gi|169261106|gb|ACA52201.1| chloroplast chlorophyll A/B-binding protein [Oenothera elata subsp.
hookeri]
Length = 119
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 73/86 (84%), Gaps = 5/86 (5%)
Query: 1 MRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 55
MR+T A ++ WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETF
Sbjct: 34 MRKTAGKAKPAVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF 93
Query: 56 AKNRELEVIHSRWAMLGALGCVFPEI 81
AKNRELEVIHSRWAMLGALGCVFPE+
Sbjct: 94 AKNRELEVIHSRWAMLGALGCVFPEL 119
>gi|209778965|gb|ACI87793.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 106
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
Query: 47 GLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGG 106
GLSADPETFA +RELE IHSR AM+GALGCV PE+L+ +GV+ GEAVW KA FSEGG
Sbjct: 2 GLSADPETFAMHRELE-IHSRRAMMGALGCVIPELLAIDGVRCGEAVWCKAAQ--FSEGG 58
Query: 107 LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA 157
LDYL +IHAQSILAIWA QVVL + GYR+GGG LGEGLDPLYPG A
Sbjct: 59 LDYL-RYVMIHAQSILAIWAFQVVLR--LIGYRVGGGRLGEGLDPLYPGSA 106
>gi|145356594|ref|XP_001422513.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
gi|144582756|gb|ABP00830.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 324
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 118/222 (53%), Gaps = 29/222 (13%)
Query: 13 WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR YL G ++ PSYL G GDYG+D GL AD + R EVIH+RWA
Sbjct: 102 WYGPDRKLYLPGGLLTKADLPSYLDGTLAGDYGFDPLGLGAD-GAIKQYRVAEVIHARWA 160
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
ML G V PE L G VW + G ++F +G G P + + A A QV
Sbjct: 161 MLAIPGVVIPEALGLPG-----GVWTETG-KVFLDG---ETGRPFFLENPIVFA--AVQV 209
Query: 130 VLMGFVEGYRIGG-GPLG-------------EGLDPLYPGGAFDPLGLADDPDQFAELKV 175
LM VE +R G GP G +GLDP+ PGG D +A +P A LKV
Sbjct: 210 ALMAGVEQFRSSGEGPAGFVPFKGKFDESAFKGLDPINPGGPLDFFNVASNPQDLALLKV 269
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KE+KNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 270 KEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 311
>gi|169193|gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
Length = 76
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/76 (88%), Positives = 73/76 (96%)
Query: 154 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADP
Sbjct: 1 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 60
Query: 214 VANNAWAYATNFVPGK 229
V NNAW+YATNFVPGK
Sbjct: 61 VNNNAWSYATNFVPGK 76
>gi|6440899|dbj|BAA78594.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 155
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 84/113 (74%), Gaps = 8/113 (7%)
Query: 2 RRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
++TV P + WYGPDRPK+LGPF + TPSYLTGEFPGDYGWDTAGLSA + K
Sbjct: 47 KKTVSKKPSGPAGAEWYGPDRPKWLGPFFQNTPSYLTGEFPGDYGWDTAGLSATGD-LRK 105
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL 110
R +EVIH RW MLGALGC+ PE++ + E VWFKAGAQIFSEGGLDYL
Sbjct: 106 YRTIEVIHGRWPMLGALGCLVPELIKGD---IAEPVWFKAGAQIFSEGGLDYL 155
>gi|86169487|gb|ABC86983.1| chlorophyll a/b binding protein [Brassica napus]
Length = 75
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 72/75 (96%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKN 85
S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++N
Sbjct: 1 SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 60
Query: 86 GVKFGEAVWFKAGAQ 100
GVKFGEAVWFKAG+Q
Sbjct: 61 GVKFGEAVWFKAGSQ 75
>gi|398313939|emb|CCI55396.1| PSI antenna protein Lhca1 [Marchantia polymorpha]
Length = 243
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 111/193 (57%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P+YL G PGD+G+D GL+ PE FA+ +E E+IH RWAML G + PE L
Sbjct: 52 QPRPAYLDGSSPGDFGFDPLGLAEVPENFARYKESELIHCRWAMLAVPGVLIPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W A + GG YLGNP + ++ I A + + + FVE R G P
Sbjct: 108 ---GLGNWVSAQQWAATPGGQATYLGNP--VPWGTLPIILAIEFLAVAFVEAKR-GEEPD 161
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIE 204
E YPGG FDPLG A DP + E K+KELKNGRLA+ + GF VQAI G GP+E
Sbjct: 162 HEKRK--YPGGPFDPLGFAKDPKKLEEYKLKELKNGRLALLAFLGFSVQAIAYPGTGPLE 219
Query: 205 NLYDHIADPVANN 217
NL H+++P ANN
Sbjct: 220 NLASHLSNPWANN 232
>gi|212721622|ref|NP_001132387.1| light harvesting complex mesophyll7 [Zea mays]
gi|194694246|gb|ACF81207.1| unknown [Zea mays]
Length = 185
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 70/81 (86%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
Sbjct: 48 SPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 107
Query: 71 LGALGCVFPEILSKNGVKFGE 91
LGALGCVFPE+L+ + F E
Sbjct: 108 LGALGCVFPELLADDPEAFAE 128
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/74 (86%), Positives = 66/74 (89%)
Query: 156 GAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVA 215
G P LADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV
Sbjct: 112 GCVFPELLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 171
Query: 216 NNAWAYATNFVPGK 229
NNAWAYATNFVPGK
Sbjct: 172 NNAWAYATNFVPGK 185
>gi|8698905|gb|AAF78518.1|AF195221_1 chlorophyll a/b-binding protein [Pyrus pyrifolia]
Length = 79
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 72/76 (94%)
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
MLGALGCVFPE+LS+NGVKFGEAVWFKAGAQIFSEGGL YLGNP+L+HAQSILAIWA QV
Sbjct: 1 MLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSEGGLGYLGNPSLVHAQSILAIWATQV 60
Query: 130 VLMGFVEGYRIGGGPL 145
VLMG VEGYRI GGPL
Sbjct: 61 VLMGAVEGYRIAGGPL 76
>gi|255087238|ref|XP_002505542.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
gi|226520812|gb|ACO66800.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
Length = 308
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 115/226 (50%), Gaps = 31/226 (13%)
Query: 11 SIWYGPDRPKYLGP----FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS 66
S WYGP+R YL + PSYL G GDYG+D L D + + R EVIH+
Sbjct: 82 SKWYGPNRRLYLPAGLLDINTDVPSYLDGSLAGDYGFDPLQLGKDGKV-EQYRAAEVIHA 140
Query: 67 RWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
RWAML G V PE L G VW + G ++F +G G P ++ + A A
Sbjct: 141 RWAMLAIPGIVIPEALGIPG-----GVWTETG-KVFLDG---EAGRPEILQNPYLFA--A 189
Query: 127 CQVVLMGFVEGYRIGGGPLGEG---------------LDPLYPGGAFDPLGLADDPDQFA 171
Q+ L VEGYR G P +G LDP+ PGG D +A PD A
Sbjct: 190 IQIGLFAAVEGYRAGKAPAPDGFVPFKGKFSGSDFSGLDPINPGGPLDFFNVAATPDDLA 249
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
LKVKE+KNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 250 VLKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 295
>gi|302804514|ref|XP_002984009.1| light-harvesting complex [Selaginella moellendorffii]
gi|300148361|gb|EFJ15021.1| light-harvesting complex [Selaginella moellendorffii]
Length = 246
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 109/193 (56%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P+YL G PGD+G+D GL P+ + +E E+IH RWAML GC+ PE L
Sbjct: 55 QPRPAYLDGSAPGDFGFDPLGLGEVPDNLERFKESELIHCRWAMLAVPGCLIPEAL---- 110
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A + GG YLG P + ++ I A + V + FVE RIG P
Sbjct: 111 ---GLGNWVEAQQWAATPGGQATYLGTP--VPWGTLPVIIAIEFVAIAFVESRRIGV-PS 164
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIE 204
E YPGGAFDPLG + DP +F E K+KE+KNGRLA+ + GF QA G GP++
Sbjct: 165 AEKRK--YPGGAFDPLGFSKDPKKFEEFKLKEVKNGRLALLAFLGFCAQAAAYPGTGPLQ 222
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 223 NLATHLADPWHNN 235
>gi|168998334|gb|ACA42563.1| hypothetical protein [Camellia sinensis]
Length = 81
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 75/98 (76%), Gaps = 17/98 (17%)
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
MG VEGYRI GGPLGE DPLYP ELKVKE+KNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVTDPLYP-----------------ELKVKEIKNGRLAMFSMFGF 43
Query: 192 FVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
FVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 44 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 81
>gi|293337343|gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
Length = 274
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 127/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DR + S+Q+ SYL G PGDYG+D GLS DPE F + L E+I+ R+
Sbjct: 51 GADRQLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPSWLAYGEIINGRY 107
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WFK G I G DY +P ++
Sbjct: 108 AMLGAVGAIAPEILGKAGLIPPETALPWFKTGV-IPPAGTYDYWADP--------YTLFV 158
Query: 127 CQVVLMGFVEGYR---------------IGGGPLGEGL-DPLYPGG-AFDPLGLADDPDQ 169
++ LMGF E R +G EG +P+YPGG F+PLG D
Sbjct: 159 FELALMGFAEHRRFQDFQKPGCLSKQYFLGFEKYFEGSGNPIYPGGPLFNPLGFGKDEKS 218
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DH++DPV NN
Sbjct: 219 LKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLSDPVNNN 266
>gi|154357500|gb|ABS78774.1| At4g10340-like protein [Arabidopsis halleri subsp. halleri]
Length = 149
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 102/153 (66%), Gaps = 6/153 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA G + PE L+K G K G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGAKCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI E D L+PGG FDPLGLA DPDQ A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNELDFE--DKLHPGGPFDPLGLAKDPDQGALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
+KNGRLAMF+M GFF+QA VTG+GP+ENL H+
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|225436257|ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
vinifera]
Length = 274
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 129/229 (56%), Gaps = 39/229 (17%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ +YL G PGDYG+D GLS DPE F + R L EVI+ R+
Sbjct: 50 GADRPLWFA--SKQSLTYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRY 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGL-DYLGNPNLIHAQSILAIW 125
AMLGA+G + PEIL K G+ E WFK G +F G +Y +P ++
Sbjct: 107 AMLGAVGAIAPEILGKLGLIPPETALPWFKTG--VFPPAGTYNYWADP--------YTLF 156
Query: 126 ACQVVLMGFVEGYRI----GGGPLGE----GL--------DPLYPGGA-FDPLGLADDPD 168
++ LMGF E R G +G+ GL DP YPGG F+PLG D
Sbjct: 157 VFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEK 216
Query: 169 QFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+F Q VTG GP++NL DH+ADPV NN
Sbjct: 217 SLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHLADPVNNN 265
>gi|62733870|gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|77549543|gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 225
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 105/208 (50%), Gaps = 65/208 (31%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE F+K + E
Sbjct: 65 WYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYE------- 117
Query: 70 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV 129
LIHA+ W V
Sbjct: 118 ---------------------------------------------LIHAR-----W---V 124
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMF 189
VL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 125 VLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSML 182
Query: 190 GFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 183 GFFIQAYVTGEGPVENLSKHLSDPFGNN 210
>gi|356554088|ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 1 [Glycine max]
gi|356554090|ref|XP_003545382.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 2 [Glycine max]
Length = 276
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L E+I+ R+
Sbjct: 53 GSDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 109
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WF+ G +F G + ++
Sbjct: 110 AMLGAVGAIAPEILGKAGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFV 160
Query: 127 CQVVLMGFVEGYRIGG----GPLGE--------GL----DPLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL +P YPGG F +PLG D
Sbjct: 161 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKS 220
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DH+ADPV NN
Sbjct: 221 LKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNN 268
>gi|356501755|ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 276
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L E+I+ R+
Sbjct: 53 GSDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 109
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WF+ G +F G + ++
Sbjct: 110 AMLGAVGAIAPEILGKAGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFV 160
Query: 127 CQVVLMGFVEGYRIGG----GPLGE--------GL----DPLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL +P YPGG F +PLG D
Sbjct: 161 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKS 220
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DH+ADPV NN
Sbjct: 221 LKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNN 268
>gi|255076759|ref|XP_002502049.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
gi|226517314|gb|ACO63307.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
Length = 393
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 122/220 (55%), Gaps = 14/220 (6%)
Query: 3 RTVKSAPQSIWYGPDRPKYL-GPFSEQTPSYLTGEFPGDYGWDTAGL-SADPETFAKNRE 60
R A YGP R K+L F P +L G GD G+D GL S P + RE
Sbjct: 165 RAAARATMPAHYGPTRRKFLPDGFGYPFPEHLDGTLCGDAGFDPLGLASGSPGDLDRYRE 224
Query: 61 LEVIHSRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGAQIFS--EGGLDYLG--NPNL 115
LE++H RWAMLG +G PE L++ G++ GE VW+K GA + + LDYLG ++
Sbjct: 225 LELLHGRWAMLGVVGAAVPEALARFGGLELGEPVWWKVGAAKLNSPDLALDYLGLGGFHI 284
Query: 116 IHAQSILAIWACQVVLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPD 168
+ + I ACQ+VLMG E R G P+G L D YPGGA FDP G++ D
Sbjct: 285 AGSSGLAVIAACQLVLMGGPEYARKVGIDSLVPVGVYLPGDRDYPGGAPFDPFGVSADAA 344
Query: 169 QFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYD 208
F KV E+K+GRLAM +M G F QA TG GP+ENL +
Sbjct: 345 VFERQKVAEMKHGRLAMVAMLGCFAQAWATGVGPVENLTE 384
>gi|154357502|gb|ABS78775.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357504|gb|ABS78776.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357506|gb|ABS78777.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357508|gb|ABS78778.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357510|gb|ABS78779.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357512|gb|ABS78780.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357514|gb|ABS78781.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357516|gb|ABS78782.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357518|gb|ABS78783.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357520|gb|ABS78784.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357522|gb|ABS78785.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357524|gb|ABS78786.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357526|gb|ABS78787.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357528|gb|ABS78788.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357530|gb|ABS78789.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357532|gb|ABS78790.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357534|gb|ABS78791.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357536|gb|ABS78792.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357538|gb|ABS78793.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357540|gb|ABS78794.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357542|gb|ABS78795.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357544|gb|ABS78796.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357546|gb|ABS78797.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357548|gb|ABS78798.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357550|gb|ABS78799.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357552|gb|ABS78800.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357554|gb|ABS78801.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357556|gb|ABS78802.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357558|gb|ABS78803.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357562|gb|ABS78805.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357566|gb|ABS78807.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357568|gb|ABS78808.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357572|gb|ABS78810.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357574|gb|ABS78811.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 102/153 (66%), Gaps = 6/153 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA G + PE L+K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
+KNGRLAMF+M GFF+QA VTG+GP+ENL H+
Sbjct: 117 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|226358407|gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 240
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 13 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 69
WYGPDR +L + P YL GE PGDYG+D GLS PE FAK + E+IH+RWA
Sbjct: 73 WYGPDRRIFLPEGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWA 132
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y G I+ + +
Sbjct: 133 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV---VAE 189
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNG
Sbjct: 190 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 240
>gi|308811240|ref|XP_003082928.1| unnamed protein product [Ostreococcus tauri]
gi|63029301|gb|AAY27549.1| chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5
[Ostreococcus tauri]
gi|116054806|emb|CAL56883.1| unnamed protein product [Ostreococcus tauri]
Length = 316
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 124/245 (50%), Gaps = 45/245 (18%)
Query: 2 RRTVKSAPQSI--------WYGPDRPKYL--GPFSE-QTPSYLTGEFPGDYGWDTAGLSA 50
R VK+A Q + WYGP+R YL G ++ PSYL G GDYG+D GL A
Sbjct: 74 RAPVKAARQPVDQKAAIAKWYGPNRKLYLPGGLLTKADLPSYLDGTLAGDYGFDPLGLGA 133
Query: 51 DPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYL 110
D + R E++H+RWAML G V PE L+ G VW + G ++F +G
Sbjct: 134 DGKV-KDYRVAEILHARWAMLAVPGVVIPEALNIPG-----GVWTETG-KVFLDGE---- 182
Query: 111 GNPNLIHAQSILAIW----ACQVVLMGFVEGYRIGG-GPLG-------------EGLDPL 152
SIL W A QVVLMG E +R G GP G GLDP+
Sbjct: 183 -----TGRDSILEFWPIYAAIQVVLMGGAEKFRQDGVGPAGFVPFKGKFEESAFNGLDPV 237
Query: 153 YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIAD 212
PGG D +A +P LKVKE+KNGRLAM +M G FVQ VTG+GP N H+A+
Sbjct: 238 NPGGPLDFFDVAKNPQDLQILKVKEIKNGRLAMIAMLGVFVQGAVTGEGPAANWGKHVAN 297
Query: 213 PVANN 217
P N
Sbjct: 298 PFGYN 302
>gi|87313167|gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein Lhca3 [Mesostigma
viride]
Length = 300
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 120/221 (54%), Gaps = 40/221 (18%)
Query: 25 FSEQTP-SYLTGEFPGDYGWDTAGLSA--------DPETFAKNRELEVIHSRWAMLGALG 75
FS++ SYL G PGD+G+D GL DP+ A + EVIH R+AMLG G
Sbjct: 80 FSDKAAQSYLDGSKPGDFGYDPLGLYKPEGAGGFIDPKWLAYS---EVIHCRYAMLGMAG 136
Query: 76 CVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
V PEIL K G+ E VWFK G I SEG DY +P LA++ +VVLM
Sbjct: 137 MVAPEILGKLGLIPAETGLVWFKTGV-IPSEGQYDYWASP--------LALFWIEVVLMQ 187
Query: 134 FVE-----GYRIGGGP-----------LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVK 176
F E YR G G DP YPGGA F+ LG D +LK+K
Sbjct: 188 FAELRRWQDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEKSMNDLKLK 247
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELKNGRLAM + GFF+QA+ TG+GP +NL DH+ADP NN
Sbjct: 248 ELKNGRLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNN 288
>gi|116791821|gb|ABK26121.1| unknown [Picea sitchensis]
gi|224284036|gb|ACN39756.1| unknown [Picea sitchensis]
gi|224284482|gb|ACN39975.1| unknown [Picea sitchensis]
gi|224284909|gb|ACN40184.1| unknown [Picea sitchensis]
gi|224285218|gb|ACN40335.1| unknown [Picea sitchensis]
gi|224285824|gb|ACN40626.1| unknown [Picea sitchensis]
Length = 289
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 127/240 (52%), Gaps = 45/240 (18%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNR 59
+ VK + +W+ S+Q+ SYL G PGDYG+D GL DPE F +
Sbjct: 61 KPVKQGDRQLWFA----------SKQSLSYLDGSLPGDYGFDPLGL-MDPEGPGGFIEPG 109
Query: 60 EL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPN 114
L E+I+ R+AMLGA+G + PEIL K G+ E WF+ G I G DY +P
Sbjct: 110 WLAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGV-IPPAGTYDYWADP- 167
Query: 115 LIHAQSILAIWACQVVLMGFVE-----GYRIGGGP-----------LGEGLDPLYPGG-A 157
++ ++ LMGF E YR G LG +P YPGG
Sbjct: 168 -------FTLFVLEMALMGFAEHRRLQDYRYPGSMSKQYFLGFEKYLGGSGNPSYPGGPL 220
Query: 158 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F+PLG D ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 221 FNPLGFGKDEKSMKELKLKEVKNGRLAMLAIVGYFIQGLVTGVGPFQNLLDHLADPVNNN 280
>gi|20794|emb|CAA41407.1| Type III chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 286
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 128/240 (53%), Gaps = 45/240 (18%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL- 61
+ VK + +W+ S+Q+ SYL G PGDYG+D GL DPE E
Sbjct: 59 KPVKQGDRQLWFA----------SDQSLSYLDGSLPGDYGFDPLGL-MDPEGPGGFMEPG 107
Query: 62 -----EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPN 114
E+I+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P
Sbjct: 108 WLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFQTGV-IPPAGTYNYWADP- 165
Query: 115 LIHAQSILAIWACQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGG-A 157
++ ++ LMGF E R+ G +G+ GL+ P YPGG
Sbjct: 166 -------FTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLGLEKFLGGSGNPAYPGGPL 218
Query: 158 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F+PLG D ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 219 FNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVHNN 278
>gi|145079550|tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Mesostigma viride]
Length = 278
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 120/221 (54%), Gaps = 40/221 (18%)
Query: 25 FSEQTP-SYLTGEFPGDYGWDTAGLSA--------DPETFAKNRELEVIHSRWAMLGALG 75
FS++ SYL G PGD+G+D GL DP+ A + EVIH R+AMLG G
Sbjct: 58 FSDKAAQSYLDGSKPGDFGYDPLGLYKPEGAGGFIDPKWLAYS---EVIHCRYAMLGMAG 114
Query: 76 CVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG 133
V PEIL K G+ E VWFK G I SEG DY +P LA++ +VVLM
Sbjct: 115 MVAPEILGKLGLIPAETGLVWFKTGV-IPSEGQYDYWASP--------LALFWIEVVLMQ 165
Query: 134 FVE-----GYRIGGGP-----------LGEGLDPLYPGGA-FDPLGLADDPDQFAELKVK 176
F E YR G G DP YPGGA F+ LG D +LK+K
Sbjct: 166 FAELRRWQDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEKSMNDLKLK 225
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELKNGRLAM + GFF+QA+ TG+GP +NL DH+ADP NN
Sbjct: 226 ELKNGRLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNN 266
>gi|145079801|tpg|DAA05936.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Micromonas sp. CCMP490]
Length = 333
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 120/231 (51%), Gaps = 38/231 (16%)
Query: 10 QSIWYGPDRPKYLGP----FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+S WYGP+R YL + PSY+ G GDYG+D L D + A+ R EV H
Sbjct: 105 KSKWYGPNRRLYLPAGLLDINTDVPSYMNGTLAGDYGFDPLQLGKDGK-IAQYRIAEVQH 163
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGL---DYLGNPNLIHAQSIL 122
+RWAML G V PE L GV G W + G ++F +G + LGNP L A
Sbjct: 164 ARWAMLAVPGVVIPEAL---GVPGGN--WTETG-KVFLDGEAGRPEILGNPYLFTA---- 213
Query: 123 AIWACQVVLMGFVEGYRIGG--GPLG-------------EGLDPLYPGGAFDPLGLADDP 167
+V L+ VEGYR G P G +GLDP+ PGG D L +A P
Sbjct: 214 ----IEVALLAGVEGYRSGKLEAPAGFAPIYGKFEGKDFKGLDPINPGGPLDFLNVASTP 269
Query: 168 DQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPIENLYDHIADPVANN 217
+ A LKVKE+KNGRLAM +M G FVQ T G+GP N H+ADP A N
Sbjct: 270 EDLAILKVKEIKNGRLAMIAMLGVFVQGATTGGEGPATNWAKHVADPFAYN 320
>gi|154357564|gb|ABS78806.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 101/153 (66%), Gaps = 6/153 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA G + PE L+K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
+KNGRLAMF M GFF+QA VTG+GP+ENL H+
Sbjct: 117 IKNGRLAMFGMLGFFIQAYVTGEGPVENLAKHL 149
>gi|154357570|gb|ABS78809.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 101/153 (66%), Gaps = 6/153 (3%)
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIH 117
+ E+IH+RWAMLGA G + PE L+K G G EAVWFK GA + L+Y G I+
Sbjct: 2 QAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 61
Query: 118 AQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
+ +VVL+G E YRI G E D L+PGG FDPLGLA DP+Q A LKVKE
Sbjct: 62 LVLAVV---AEVVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKE 116
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHI 210
+KNGRLAMF M GFF+QA VTG+GP+ENL H+
Sbjct: 117 IKNGRLAMFXMLGFFIQAYVTGEGPVENLAKHL 149
>gi|15220077|ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|30693978|ref|NP_849778.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|12321000|gb|AAG50618.1|AC083835_3 light-harvesting complex protein [Arabidopsis thaliana]
gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|19699116|gb|AAL90924.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|62320735|dbj|BAD95402.1| light-harvesting complex protein [Arabidopsis thaliana]
gi|332193996|gb|AEE32117.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|332193997|gb|AEE32118.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
Length = 256
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GDYG+D GL DPE+ + E++HSR+AMLG G +F ++L G++
Sbjct: 56 PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR- 114
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE--------GYRIG 141
VW++AGA F D+ LI Q +L +A M FV + G
Sbjct: 115 NLPVWYEAGAVKF-----DFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 169
Query: 142 GGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M GFFVQA VT
Sbjct: 170 LEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 229
Query: 201 GPIENLYDHIADP 213
GPI+NL +H+++P
Sbjct: 230 GPIDNLVEHLSNP 242
>gi|222423311|dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]
Length = 248
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GDYG+D GL DPE+ + E++HSR+AMLG G +F ++L G++
Sbjct: 48 PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR- 106
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE--------GYRIG 141
VW++AGA F D+ LI Q +L +A M FV + G
Sbjct: 107 NLPVWYEAGAVKF-----DFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 161
Query: 142 GGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M GFFVQA VT
Sbjct: 162 LEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 221
Query: 201 GPIENLYDHIADP 213
GPI+NL +H+++P
Sbjct: 222 GPIDNLVEHLSNP 234
>gi|268612160|pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612196|pdb|2WSF|3 Chain 3, Improved Model Of Plant Photosystem I
Length = 276
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L E+I+ R+
Sbjct: 53 GSDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 109
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WF+ G I G +Y + ++
Sbjct: 110 AMLGAVGAIAPEILGKAGLIPQETALPWFRTGF-IPPAGTYNYWADS--------YTLFV 160
Query: 127 CQVVLMGFVEGYRIGG----GPLGE--------GL----DPLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL +P YPGG F +PLG D
Sbjct: 161 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKS 220
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DH+ DPV NN
Sbjct: 221 LKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLTDPVHNN 268
>gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 127/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G +RP ++ S Q+ SYL G PGDYG+D GLS DPE F + R L E+I+ R+
Sbjct: 50 GANRPLWVA--SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRF 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA G + PEIL K G+ E WF+ G I G Y + ++
Sbjct: 107 AMLGAAGAIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFV 157
Query: 127 CQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R+ G +G+ GL+ P YPGG F +PLG D
Sbjct: 158 LEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKS 217
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 218 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|21593722|gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
Length = 256
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GDYG+D GL DPE+ + E++HSR+AMLG G +F ++L G++
Sbjct: 56 PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR- 114
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE--------GYRIG 141
VW++AGA F D+ LI Q +L +A M FV + G
Sbjct: 115 NLPVWYEAGAVKF-----DFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 169
Query: 142 GGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M GFFVQA VT
Sbjct: 170 IEAALEGLEPGYPGGPLLNPLGLAKDVKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 229
Query: 201 GPIENLYDHIADP 213
GPI+NL +H+++P
Sbjct: 230 GPIDNLVEHLSNP 242
>gi|356502352|ref|XP_003519983.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
[Glycine max]
Length = 104
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 73/84 (86%)
Query: 140 IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199
I GGPLGE +DP+Y G+ DPLGLADDP+ FAELKVKE KN RLAMFSMFGFFVQAIVTG
Sbjct: 9 IAGGPLGEVIDPIYLEGSIDPLGLADDPEVFAELKVKEFKNRRLAMFSMFGFFVQAIVTG 68
Query: 200 KGPIENLYDHIADPVANNAWAYAT 223
KG +ENL +H+A+PV NNAWAYAT
Sbjct: 69 KGSLENLTNHLANPVNNNAWAYAT 92
>gi|255640167|gb|ACU20374.1| unknown [Glycine max]
Length = 276
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 127/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L E+I+ R+
Sbjct: 53 GSDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 109
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WF+ G +F G + ++
Sbjct: 110 AMLGAVGAIAPEILGKAGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFV 160
Query: 127 CQVVLMGFVEGYRIGG----GPLGE--------GL----DPLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL +P YPGG F +PLG D
Sbjct: 161 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKS 220
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FVQA+VTG GP +NL DH+ DPV NN
Sbjct: 221 LKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLTDPVHNN 268
>gi|215740823|dbj|BAG96979.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 159
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 70 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
MLGA G + PE +K G G EAVWFK GA + L+Y GN I+ ++ A +
Sbjct: 1 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPIN---LIVAVAAE 57
Query: 129 VVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
VVL+G E YRI G E D L+PGG FDPLGLA DPDQ A LKVKE+KNGRLAMFSM
Sbjct: 58 VVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSM 115
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 116 LGFFIQAYVTGEGPVENLSKHLSDPFGNN 144
>gi|15219941|ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|334183551|ref|NP_001185280.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16649019|gb|AAL24361.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20260044|gb|AAM13369.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332195725|gb|AEE33846.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195727|gb|AEE33848.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 273
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G +RP + S Q+ SYL G PGDYG+D GLS DPE F + R L E+I+ R+
Sbjct: 50 GANRPLWFA--SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRF 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA G + PEIL K G+ E WF+ G I G Y + ++
Sbjct: 107 AMLGAAGAIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFV 157
Query: 127 CQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R+ G +G+ GL+ P YPGG F +PLG D
Sbjct: 158 LEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKS 217
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 218 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|255646873|gb|ACU23907.1| unknown [Glycine max]
Length = 276
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 128/228 (56%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L E+I+ R+
Sbjct: 53 GSDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 109
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PEIL K G+ E WF+ G +F G + ++
Sbjct: 110 AMLGAVGAIAPEILGKAGLIPQETALPWFRTG--VFPPAG-------TYNYWADSYTLFV 160
Query: 127 CQVVLMGFVEGYRIGG----GPLGE--------GL----DPLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL +P YPGG F +PLG D
Sbjct: 161 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKS 220
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+LK+KE+KNGRLAM ++ G+FV+A+VTG GP +NL DH+ADPV NN
Sbjct: 221 LKDLKLKEVKNGRLAMLAILGYFVRALVTGVGPYQNLLDHLADPVHNN 268
>gi|449527935|ref|XP_004170963.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like, partial [Cucumis sativus]
Length = 117
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/79 (82%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Query: 1 MRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
MR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKN
Sbjct: 35 MRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 94
Query: 59 RELEVIHSRWAMLGALGCV 77
RELEVIHSRWAMLGALGCV
Sbjct: 95 RELEVIHSRWAMLGALGCV 113
>gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type III CAB-3; Flags: Precursor
gi|309673|gb|AAA84545.1| light harvesting protein [Pisum sativum]
Length = 275
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 127/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + R L EVI+ R+
Sbjct: 52 GVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRF 108
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA+G + PE L K G+ E WF+ G I G +Y + ++
Sbjct: 109 AMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFV 159
Query: 127 CQVVLMGFVEGYRIGG----GPLGE----GLD--------PLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R G +G+ GL+ P YPGG F +PLG D
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKS 219
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 220 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
>gi|4741942|gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]
Length = 256
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GDYG+D GL DPE+ + E++HSR+AMLG G +F ++L G++
Sbjct: 56 PPYLDGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR- 114
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE--------GYRIG 141
VW++AGA F D+ LI Q +L +A M FV + G
Sbjct: 115 NLPVWYEAGAVKF-----DFACTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFG 169
Query: 142 GGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M GFFVQA VT
Sbjct: 170 LEAALEGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHT 229
Query: 201 GPIENLYDHIADP 213
GPI+NL +H+++P
Sbjct: 230 GPIDNLVEHLSNP 242
>gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCI type III CAB-8; Flags: Precursor
gi|19182|emb|CAA33330.1| Type III chlorophyll a/b-binding protein [Solanum lycopersicum]
Length = 273
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P
Sbjct: 59 SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ LMGF E
Sbjct: 118 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEH 168
Query: 138 YRIGG----GPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL DP YPGG F+PLG D ELK+KE+KN
Sbjct: 169 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 228
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 229 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
>gi|226872|prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 123/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + + L EVI+ R+AMLGA G + P
Sbjct: 59 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ LMGF E
Sbjct: 118 EILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEH 168
Query: 138 YRIGG----GPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL DP YPGG F+PLG D ELK+KE+KN
Sbjct: 169 RRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 228
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 229 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
>gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536119|gb|EEF37774.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 273
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 130/236 (55%), Gaps = 37/236 (15%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL-- 61
S+ + G DR + S+Q+ +YL G PGD+G+D GLS DPE F + + L
Sbjct: 42 SSTPPVKQGADRQLWFA--SKQSLTYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAY 98
Query: 62 -EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHA 118
E+I+ R+AMLGA G + PEIL K G+ E WF+ G I G DY +P
Sbjct: 99 GEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTGV-IPPAGTYDYWADP----- 152
Query: 119 QSILAIWACQVVLMGFVEGYRIGG----GPLGE----GL--------DPLYPGGA-FDPL 161
++ ++ LMGF E R G +G+ GL DP YPGG F+PL
Sbjct: 153 ---YTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPL 209
Query: 162 GLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
G D ELK+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 210 GFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|412985627|emb|CCO19073.1| unknown [Bathycoccus prasinos]
Length = 291
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 118/235 (50%), Gaps = 29/235 (12%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAK 57
++ TVK+A S WYGP R YL + PSYL G+ GDYG+D GL AD +
Sbjct: 55 VKTTVKTADLSKWYGPQRKLYLPSGLLTTADIPSYLDGKLAGDYGFDPLGLGAD-GAIKQ 113
Query: 58 NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIH 117
R EVIH+RWAML G V PE L+ G G+ W + G ++F EG G L
Sbjct: 114 YRVAEVIHARWAMLAVPGIVIPEALNIAG---GD--WRETG-KVFLEGSTGRFGPAELWL 167
Query: 118 AQSILAIWACQVVLMGFVEGYRI--GGGPLG-------------EGLDPLYPGGAFDPLG 162
++ A +VLMG E +R P G LDP+ PGG D
Sbjct: 168 GIAV----APLIVLMGGAEKFRSDPASAPSGFVPFKGSFTGKDFAKLDPINPGGPLDFYN 223
Query: 163 LADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+A P LKVKE+KNGRLAM +M G FVQ TG+GP N H+ADP N
Sbjct: 224 VAATPQDLEILKVKEIKNGRLAMIAMLGVFVQGATTGEGPAANWGKHVADPFGYN 278
>gi|424512849|emb|CCO66433.1| predicted protein [Bathycoccus prasinos]
Length = 286
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 123/229 (53%), Gaps = 37/229 (16%)
Query: 19 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLG 72
P Y+ S+Q+ SYL G PGDYG+D GLS DPE F L EVIH RWAMLG
Sbjct: 64 PLYMLGVSDQSLSYLDGTLPGDYGFDPLGLS-DPEGAGGFINPGWLAYAEVIHGRWAMLG 122
Query: 73 ALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
G PE + VWFK G I ++G D+ P A++ V +M
Sbjct: 123 VAGATAPETMKGFIPDSTAVVWFKNGI-IPAQGSYDFWAPPT--------ALFWVMVCMM 173
Query: 133 GFVE----------GYRIGGGPLG--EGL----DPLYPGGAFDPLGLADDPDQFAELKVK 176
FVE G+R G +G+ +P YPGG+F+P+G+ + +KVK
Sbjct: 174 NFVEINRLTEYANPGFRTKQSLAGLEKGMGGTGNPAYPGGSFNPMGMGKN--DMDAMKVK 231
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
E+KNGRLAM + FG VQAI+TG+GP++NL DH+ DP A+N TNF
Sbjct: 232 EIKNGRLAMMAFFGIMVQAIITGEGPVKNLTDHVTDPFAHN---LLTNF 277
>gi|224131950|ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
gi|118485656|gb|ABK94678.1| unknown [Populus trichocarpa]
gi|222861991|gb|EEE99533.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
Length = 274
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 128/238 (53%), Gaps = 45/238 (18%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL 61
VK + +W+ S+Q+ SYL G PGD+G+D GLS DPE F + + L
Sbjct: 49 VKQGNRQLWFA----------SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWL 97
Query: 62 ---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLI 116
E+I+ R+AMLGA+G + PEIL K G+ E WF+ G I G Y +P
Sbjct: 98 AYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGV-IPPAGTYSYWADP--- 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGG----GPLGEGL------------DPLYPGGA-FD 159
++ ++ LMGF E R+ G +G+ +P YPGG F+
Sbjct: 154 -----YTLFVFEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFN 208
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
PLG D +LK+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 209 PLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNN 266
>gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
gi|297333925|gb|EFH64343.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 129/236 (54%), Gaps = 37/236 (15%)
Query: 7 SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL-- 61
+A + G +RP + S Q+ SYL G PGDYG+D GLS DPE F + R L
Sbjct: 42 TATPPVKQGANRPLWFA--SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAY 98
Query: 62 -EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHA 118
E+I+ R+AMLGA G + PEIL K G+ E WF+ G I G Y +
Sbjct: 99 GEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTGV-IPPAGTYTYWADN----- 152
Query: 119 QSILAIWACQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPL 161
++ ++ LMGF E R+ G +G+ GL+ P YPGG F +PL
Sbjct: 153 ---YTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPL 209
Query: 162 GLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
G D ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 210 GFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|297820242|ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
gi|297323842|gb|EFH54263.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 107/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
E P+YL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 52 EPRPAYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 108 ---GYGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 123/228 (53%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DR + S+Q+ SYL G PGD+G+D GLS DPE F + + L E+I+ R+
Sbjct: 52 GADRQLWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 108
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLG G + PEIL K G+ E WF+ G I G Y +P ++
Sbjct: 109 AMLGVAGAIAPEILGKLGLIPPETALPWFQTGV-IPPAGTYSYWADP--------YTLFV 159
Query: 127 CQVVLMGFVEGYRIGG----GPLGEGL------------DPLYPGG-AFDPLGLADDPDQ 169
++ LMGF E R G +G+ DP YPGG F+PLG D
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFGKDEKS 219
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ GFF+Q +VTG GP +NL DH+ADPV NN
Sbjct: 220 MKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNN 267
>gi|297846882|ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
gi|297337164|gb|EFH67581.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 110/202 (54%), Gaps = 33/202 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G+ GDYG+D GL DPE+ + E++HSR+AMLG G +F ++L G++
Sbjct: 56 PPYLDGKLAGDYGFDPLGLGEDPESLRWYVQAELVHSRFAMLGVAGILFTDLLRTTGIR- 114
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VW++AGA F D+ LI Q +LMGF E R
Sbjct: 115 NLPVWYEAGAVKF-----DFASTKTLI---------VVQFLLMGFAETKRYVDYVSPGSQ 160
Query: 140 -------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
G EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M GF
Sbjct: 161 AKEGSFFFGIEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMMAMLGF 220
Query: 192 FVQAIVTGKGPIENLYDHIADP 213
FVQA VT GPI+NL +H+++P
Sbjct: 221 FVQASVTHTGPIDNLVEHLSNP 242
>gi|407971012|ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloroplastic [Solanum
lycopersicum]
gi|115764|sp|P12360.1|CB11_SOLLC RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;
AltName: Full=LHCI type I CAB-6A; AltName:
Full=Light-harvesting complex I 26 kDa protein; Flags:
Precursor
gi|170494|gb|AAA34186.1| chlorophyll a/b binding protein precursor [Solanum lycopersicum]
Length = 246
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 107/193 (55%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ PSYL G PGD+G+D+ GL P + +E E+IH RWAML G + PE L
Sbjct: 53 QPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I A + + + FVE R
Sbjct: 109 ---GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR---SME 160
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
+ YPGGAFDPLG + DP +F ELKVKE+KNGRLA+ ++ GF V Q+ G GP+E
Sbjct: 161 KDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLE 220
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 221 NLATHLADPWHNN 233
>gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Zea mays]
gi|238013956|gb|ACR38013.1| unknown [Zea mays]
gi|413954858|gb|AFW87507.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 267
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + P
Sbjct: 53 SKQSLSYLDGTLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAP 111
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EI K G+ E WFK G I G +Y + ++ + LMGF E
Sbjct: 112 EIFGKMGIIPPETALPWFKTGV-IPPAGTYNYWADS--------YTLFVFNMALMGFAEH 162
Query: 138 YRI----GGGPLGE----GL--------DPLYPGGA-FDPLGLADDPDQFAELKVKELKN 180
R+ G +G+ GL DP YPGG F+PLG + ELK+KE+KN
Sbjct: 163 RRLQDWYNPGSMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFGKTEKEMNELKLKEIKN 222
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 223 GRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNN 259
>gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 123/228 (53%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DR + S+Q+ SYL G PGD+G+D GLS DPE F + + L E+I+ R+
Sbjct: 52 GADRQLWFA--SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRY 108
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLG G + PEIL K G+ E WF+ G I G Y +P ++
Sbjct: 109 AMLGVAGAIAPEILGKLGLIPPETALPWFQTGV-IPPAGTYSYWADP--------YTLFV 159
Query: 127 CQVVLMGFVEGYRIGG----GPLGEGL------------DPLYPGG-AFDPLGLADDPDQ 169
++ LMGF E R G +G+ DP YPGG F+PLG D
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFGKDERS 219
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ GFF+Q +VTG GP +NL DH+ADPV NN
Sbjct: 220 MKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNN 267
>gi|87313163|gb|ABD37878.1| light-harvesting chlorophyll-a/b binding protein Lhca1 [Mesostigma
viride]
gi|145079752|tpg|DAA05929.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Mesostigma viride]
Length = 225
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 110/199 (55%), Gaps = 17/199 (8%)
Query: 20 KYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 79
K P + P++L G PGD+G+D GL+ DP + A+ RE EV++ RWAMLG G + P
Sbjct: 39 KLWAPGLVKAPAHLDGSLPGDFGYDPLGLAKDPVSLARYREAEVMNGRWAMLGVAGMLAP 98
Query: 80 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 139
E++ G+ W A + G YLGN ++LA+ + + +VE
Sbjct: 99 ELV-------GQGTWLSAQDWAVTGGKPTYLGNELPYGFGTVLAV---EFFCLSWVE--- 145
Query: 140 IGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199
I G + + +YPGGAFDPLG D KVKEL+NGRLAM + G + Q I G
Sbjct: 146 ISRGLEKDPMKRIYPGGAFDPLGFGKDEVN----KVKELRNGRLAMVAFVGMWCQGIHVG 201
Query: 200 KGPIENLYDHIADPVANNA 218
GP+ NL DH+ADP+ NNA
Sbjct: 202 GGPVSNLMDHLADPLHNNA 220
>gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungiella halophila]
Length = 273
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 126/228 (55%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G +RP + S Q+ +YL G PGDYG+D GLS DPE F + R L E+I+ R+
Sbjct: 50 GANRPLWFA--SSQSLTYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRF 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA G + PEIL K G+ E WF+ G I G Y + ++
Sbjct: 107 AMLGAAGAIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYSYWADN--------YTLFV 157
Query: 127 CQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R+ G +G+ GL+ P YPGG F +PLG +
Sbjct: 158 LEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFSGSGEPAYPGGPFFNPLGFGKNEKS 217
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 218 MKELKLKEIKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|312282193|dbj|BAJ33962.1| unnamed protein product [Thellungiella halophila]
Length = 241
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 107/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
E P+YL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 52 EPRPAYLDGSAPGDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 108 ---GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP N
Sbjct: 217 PLENLATHLADPWHKN 232
>gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 274
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 127/238 (53%), Gaps = 45/238 (18%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL 61
VK + +W+ S+Q+ SYL G PGD+G+D GLS DPE F + + L
Sbjct: 49 VKQGNRQLWFA----------SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPKWL 97
Query: 62 ---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLI 116
E+I+ R+AMLGA+G + PEIL K G+ E WF+ G I G Y +P
Sbjct: 98 AYGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGV-IPPAGTYSYWADP--- 153
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGG----GPLGEGL------------DPLYPGGA-FD 159
++ ++ LMGF E R G +G+ +P YPGG F+
Sbjct: 154 -----YTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFN 208
Query: 160 PLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
PLG D +LK+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN
Sbjct: 209 PLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNN 266
>gi|115765|sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCI type II CAB-7; Flags: Precursor
gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|170431|gb|AAA34159.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|226546|prf||1601518A chlorophyll a/b binding protein II
Length = 270
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 111/205 (54%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL++DPE+ N++ E++H RWAMLGA G
Sbjct: 63 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE+L+K G+ W+ AG Q + + L + +L WA ++
Sbjct: 121 IFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADII 173
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 174 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAV 233
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 234 MGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|242060664|ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
gi|241931452|gb|EES04597.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
Length = 245
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 53 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + S+ I + V + F E R
Sbjct: 109 ---GLGNWVKAQEWAAVPGGQATYLGNP--VPWGSLPTILVIEFVAIAFAEHQRTMEK-- 161
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 162 ----DPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 217
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 218 PLENLATHLADPWHNN 233
>gi|357495587|ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 557
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 63 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 121
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ MGF E
Sbjct: 122 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 172
Query: 138 YRI----GGGPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL +P YPGG F+PLG D ELK+KE+KN
Sbjct: 173 RRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 232
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 233 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE------VIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE E E +I+ R+AMLGA G + P
Sbjct: 343 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 401
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ MGF E
Sbjct: 402 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 452
Query: 138 YRI----GGGPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R+ G +G+ GL +P YPGG F+PLG D ELK+KE+KN
Sbjct: 453 RRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 512
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 513 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 549
>gi|302816085|ref|XP_002989722.1| light-harvesting complex [Selaginella moellendorffii]
gi|300142499|gb|EFJ09199.1| light-harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 115/217 (52%), Gaps = 36/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 79
S Q+ SYL G PGDYG+D GLS DP F L E+I+ R+AMLGA G + P
Sbjct: 65 SSQSLSYLDGTLPGDYGFDPLGLS-DPAGAGNFMTPNWLSYAEIINGRYAMLGAAGAIAP 123
Query: 80 EILSKNGV--KFGEAVWFKAGAQIFSEGGL-DYLGNPNLIHAQSILAIWACQVVLMGFVE 136
EI K G+ + VWFK G +F G +Y +P ++ ++ LMGF E
Sbjct: 124 EIFGKIGIIPQQTAVVWFKTG--VFPPAGTYNYWADP--------YTLFFLEMALMGFAE 173
Query: 137 GYRIGG----GPLGEGL------------DPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
R G +G+ DP YPGG F+P G D LK+KE+KN
Sbjct: 174 HRRAQDYYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKN 233
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA TG GP +NL DH+ADP ANN
Sbjct: 234 GRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANN 270
>gi|302824061|ref|XP_002993677.1| light harvesting complex [Selaginella moellendorffii]
gi|300138500|gb|EFJ05266.1| light harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 115/217 (52%), Gaps = 36/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFP 79
S Q+ SYL G PGDYG+D GLS DP F L E+I+ R+AMLGA G + P
Sbjct: 65 SSQSLSYLDGTLPGDYGFDPLGLS-DPAGAGNFMTPNWLSYAEIINGRYAMLGAAGAIAP 123
Query: 80 EILSKNGVKFGEA--VWFKAGAQIFSEGGL-DYLGNPNLIHAQSILAIWACQVVLMGFVE 136
EI K G+ E VWFK G +F G +Y +P ++ ++ LMGF E
Sbjct: 124 EIFGKIGIIPQETAVVWFKTG--VFPPAGTYNYWADP--------YTLFFLEMALMGFAE 173
Query: 137 GYRIGG----GPLGEGL------------DPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
R G +G+ DP YPGG F+P G D LK+KE+KN
Sbjct: 174 HRRAQDFYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKDEKSMRTLKIKEVKN 233
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA TG GP +NL DH+ADP ANN
Sbjct: 234 GRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANN 270
>gi|115766|sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCI type II CAB; Flags: Precursor
gi|169214|gb|AAA33711.1| chlorophyll binding protein precursor [Petunia x hybrida]
gi|226259|prf||1503272A chlorophyll binding protein
Length = 270
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 114/214 (53%), Gaps = 34/214 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G
Sbjct: 63 PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
PE L+K GV W+ AG Q +Y + ++ ++VL+G+
Sbjct: 121 IFIPEFLTKIGV-LNTPSWYTAGEQ-------EYFTD--------TTTLFVIELVLIGWA 164
Query: 136 EGYR---------IGGGPLG-----EGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R + P+ G D YPGG FDPLG P + EL+ KE+K
Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIK 224
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
NGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 225 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|388515199|gb|AFK45661.1| unknown [Medicago truncatula]
Length = 277
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 63 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 121
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ MGF E
Sbjct: 122 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 172
Query: 138 YRI----GGGPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL +P YPGG F+PLG D ELK+KE+KN
Sbjct: 173 RRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 232
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 233 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
>gi|75265661|sp|Q9SDM1.1|CB121_HORVU RecName: Full=Chlorophyll a-b binding protein 1B-21, chloroplastic;
AltName: Full=LHCI type I CAB-1B-21; AltName:
Full=LHCI-730 chlorophyll a/b binding protein; AltName:
Full=Light-harvesting complex I 21 kDa protein; Flags:
Precursor
gi|6685157|gb|AAF23819.1|AF218305_2 chlorophyll a/b binding protein precursor [Hordeum vulgare]
Length = 245
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 108/196 (55%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E E+ H RWAML G + PE L
Sbjct: 52 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL---- 107
Query: 87 VKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA +G YLGNP + ++ I A + + + F E R
Sbjct: 108 ---GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRT----- 157
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G G
Sbjct: 158 -MEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|357495589|ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519418|gb|AET01042.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 573
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 122/217 (56%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + R L E+I+ R+AMLGA G + P
Sbjct: 63 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAP 121
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ MGF E
Sbjct: 122 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 172
Query: 138 YRI----GGGPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL +P YPGG F+PLG D ELK+KE+KN
Sbjct: 173 RRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 232
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 233 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 269
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 120/217 (55%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE------VIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE E E +I+ R+AMLGA G + P
Sbjct: 359 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGVGGFIEPEWLAYGEIINGRFAMLGAAGAIAP 417
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EIL K G+ E WF+ G I G +Y + ++ ++ MGF E
Sbjct: 418 EILGKAGLIPAETALPWFQTGV-IPPAGTYNYWADN--------YTLFVMEMAFMGFAEH 468
Query: 138 YRI----GGGPLGE--------GL----DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R+ G +G+ GL +P YPGG F+PLG D ELK+KE+KN
Sbjct: 469 RRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 528
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QA+VTG GP +NL DH+ADPV NN
Sbjct: 529 GRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 565
>gi|356552039|ref|XP_003544379.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein 4,
chloroplastic-like [Glycine max]
Length = 274
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 115/224 (51%), Gaps = 34/224 (15%)
Query: 13 WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 72
WYG D P +LG S + PSYLTGE PGDY +D GL DP K E++H+RW L
Sbjct: 71 WYGEDGPPWLGSISYKYPSYLTGEMPGDYDFDIVGLGQDPVELXKYFNFEILHARWVTLA 130
Query: 73 ALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYL--GNPNLIHAQSILAIWACQV 129
+ V P+IL+ G V F E VW++AG LDYL +L +Q + I CQ+
Sbjct: 131 FVSAVIPKILNLLGAVHFVEPVWWRAGYSKLKVNTLDYLRIQGLHLAGSQGAVVIAICQI 190
Query: 130 VLMGFVEGYRIGG----GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKELKNGR 182
+ E R G PLG L D YPGGA FDPL L++DP+ F ELKVKE+KNG
Sbjct: 191 LKQVGPEYARXCGTEALKPLGIYLPCDINYPGGALFDPLNLSNDPEAFEELKVKEVKNG- 249
Query: 183 LAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
+L DHI+DP NN + NF+
Sbjct: 250 ----------------------SLIDHISDPFHNNLLG-SLNFI 270
>gi|449442612|ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
gi|449532766|ref|XP_004173351.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
Length = 273
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 121/217 (55%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGD+G+D GLS DPE F + R L EVI+ R+AMLGA G + P
Sbjct: 59 SKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAP 117
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EI G+ E WFK G I G +Y +P ++ ++ LMGF E
Sbjct: 118 EIFGSLGLIPPETALPWFKTGV-IPPAGTYNYWADP--------YTLFVFEMALMGFAEH 168
Query: 138 YRIGG----GPLGE----GL--------DPLYPGGA-FDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL DP YPGG F+PLG D ELK+KE+KN
Sbjct: 169 RRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 228
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+Q +VTG GP +NL DH++DPV NN
Sbjct: 229 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN 265
>gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 125/228 (54%), Gaps = 37/228 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G +RP + S Q+ SYL G PGDYG+D GLS DPE F + R L E+I+ R+
Sbjct: 50 GANRPLWFA--SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRF 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AMLGA G + PEIL K G+ E WF+ G I G Y + ++
Sbjct: 107 AMLGAAGAIAPEILGKAGLIPAETALPWFQTGV-IPPAGTYTYWADN--------YTLFV 157
Query: 127 CQVVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPLGLADDPDQ 169
++ LMGF E R+ G +G+ GL+ P YPGG F +PLG D
Sbjct: 158 LEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKS 217
Query: 170 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+A PV NN
Sbjct: 218 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLAGPVNNN 265
>gi|225690802|gb|ACO06087.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 291
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 107/194 (55%), Gaps = 20/194 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G PGD+G+D GL+ PE F + +E E+ H RWAML G + PE L
Sbjct: 80 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL------- 132
Query: 90 GEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W KA +G YLGNP + ++ I A + + + F E R
Sbjct: 133 GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRT------ME 184
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
DP YPGGAFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G GP+E
Sbjct: 185 KDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLE 244
Query: 205 NLYDHIADPVANNA 218
NL H+ADP N +
Sbjct: 245 NLATHLADPWHNTS 258
>gi|170388|gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 105/193 (54%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ PSYL G PGD+G+D GL P + +E E+IH RWAML G + PE L
Sbjct: 53 QPRPSYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I A + + + FVE R
Sbjct: 109 ---GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR---SME 160
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
+ YPGGAFDPLG + DP +F ELKVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 161 KDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLE 220
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 221 NLATHLADPWHNN 233
>gi|13265501|gb|AAG40043.2|AF324692_1 AT3g54890 [Arabidopsis thaliana]
Length = 241
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
E P+YL G PGD+G+D GL P + +E E+IH RWAML G + PE L
Sbjct: 52 EPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 108 ---GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|15233115|ref|NP_191049.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName: Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor
gi|268612158|pdb|2WSC|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612194|pdb|2WSF|1 Chain 1, Improved Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890 [Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1 AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein [Arabidopsis thaliana]
gi|166644|gb|AAA32759.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|20453135|gb|AAM19809.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130 [Arabidopsis thaliana]
gi|332645785|gb|AEE79306.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 241
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
E P+YL G PGD+G+D GL P + +E E+IH RWAML G + PE L
Sbjct: 52 EPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 108 ---GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|226504520|ref|NP_001147224.1| chlorophyll a-b binding protein [Zea mays]
gi|195608716|gb|ACG26188.1| chlorophyll a-b binding protein [Zea mays]
Length = 256
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G
Sbjct: 49 PERPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPESLKWNVQAEIVHCRWAMLGAAG 106
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 107 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 159
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 160 KPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAV 219
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 220 MGAWFQHIYTGTGPIDNLFAHLADP 244
>gi|6850838|emb|CAB71077.1| Lhca2 protein [Arabidopsis thaliana]
Length = 257
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 50 PDRPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 107
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 108 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 160
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V + G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 161 KPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAV 220
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 221 MGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|357137970|ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 259
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 112/205 (54%), Gaps = 32/205 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGDYG+D GL +P + E++H R+AM G G + +++ +G+
Sbjct: 62 PPYLDGTLPGDYGFDPLGLGEEPADLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGIS- 120
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VWF+AGA F D+ + A++ Q++LMGFVE R
Sbjct: 121 NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFVETKRYMDIVNPGSQ 166
Query: 140 ------IGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
+G EGL P YPGG F+P+GLA D E+K+KE+KNGRLAM +M GFF
Sbjct: 167 AEEGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIKNAHEVKLKEIKNGRLAMVAMLGFF 226
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
VQA VT GPI+NL H++DP NN
Sbjct: 227 VQASVTHVGPIDNLLIHLSDPFNNN 251
>gi|186511289|ref|NP_191706.2| photosystem I light harvesting complex protein [Arabidopsis
thaliana]
gi|4741940|gb|AAD28767.1|AF134120_1 Lhca2 protein [Arabidopsis thaliana]
gi|15451180|gb|AAK96861.1| Lhca2 protein [Arabidopsis thaliana]
gi|17529286|gb|AAL38870.1| putative Lhca2 protein [Arabidopsis thaliana]
gi|18377464|gb|AAL66898.1| Lhca2 protein [Arabidopsis thaliana]
gi|25083456|gb|AAN72081.1| Lhca2 protein [Arabidopsis thaliana]
gi|332646688|gb|AEE80209.1| photosystem I light harvesting complex protein [Arabidopsis
thaliana]
Length = 257
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 50 PDRPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 107
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 108 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 160
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V + G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 161 KPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAV 220
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 221 MGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
Length = 273
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 121/226 (53%), Gaps = 33/226 (14%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G +RP + S Q+ SYL G PGDYG+D GLS DPE F + R L E+I+ R+
Sbjct: 50 GANRPLWFA--SSQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRF 106
Query: 69 AMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
AMLGA G + PEIL K G+ E + G + ++ +
Sbjct: 107 AMLGAAGAIAPEILGKAGLIPAETALPXXQTGVIPPAG-------TYTYWADNYTLFVLE 159
Query: 129 VVLMGFVEGYRI----GGGPLGE----GLD--------PLYPGGAF-DPLGLADDPDQFA 171
+ LMGF E R+ G +G+ GL+ P YPGG F +PLG D
Sbjct: 160 MALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLK 219
Query: 172 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 220 ELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNN 265
>gi|149242540|pdb|2O01|1 Chain 1, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 187
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
E P+YL G PGD+G+D GL P + +E E+IH RWAML G + PE L
Sbjct: 4 EPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL---- 59
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 60 ---GYGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------ 108
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 109 SMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 168
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 169 PLENLATHLADPWHNN 184
>gi|303288722|ref|XP_003063649.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
gi|226454717|gb|EEH52022.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 306
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 13 WYGPDRPKYL--GPFSEQT--PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 68
WYG +R YL G T PSY+ G GDYG+D L AD + R EVIH+RW
Sbjct: 82 WYGKNRRFYLPSGLLDPATDVPSYMDGTLAGDYGFDPLKLGADGK-INDYRAAEVIHARW 140
Query: 69 AMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQ 128
AML G V PE L G VW + G ++F +G G P ++ I A Q
Sbjct: 141 AMLAIPGIVIPEALGIPG-----GVWTETG-KVFLDG---EAGRPEILQNPIIFA--GIQ 189
Query: 129 VVLMGFVEGYRIG---------------GGPLGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
+ L VEGYR G G GLDP+ PGG D +A P+ A L
Sbjct: 190 IALFAAVEGYRSGKVAPPEGFVPGKGKFSGSDFAGLDPINPGGPLDFFNVASTPEDLAIL 249
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KVKE+KNGRLAM +M G FVQ + TG+GP N H+ADP N
Sbjct: 250 KVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYN 293
>gi|388515647|gb|AFK45885.1| unknown [Lotus japonicus]
Length = 269
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G
Sbjct: 62 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHCRWAMLGAAG 119
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + I WA ++
Sbjct: 120 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELIFIGWAEGRRWADIL 172
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 173 KPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAV 232
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 233 MGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|388495628|gb|AFK35880.1| unknown [Medicago truncatula]
Length = 268
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G
Sbjct: 61 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAG 118
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + I WA ++
Sbjct: 119 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELIFIGWAEGRRWADIL 171
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 172 NPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAV 231
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 232 MGAWFQHIYTGTGPIDNLFAHLADP 256
>gi|326496799|dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509469|dbj|BAJ91651.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509647|dbj|BAJ87039.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 112/205 (54%), Gaps = 32/205 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YL G PGDYG+D GL PE + E++H R+AM G G + +++ +G+
Sbjct: 60 PAYLDGTLPGDYGFDPLGLGEQPEDLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGIG- 118
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VWF+AGA F D+ + A++ Q++LMGFVE R
Sbjct: 119 NLPVWFEAGATKF-----DF---------ANTTALFFVQLLLMGFVETKRYMDFVSPGSQ 164
Query: 140 ------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
+G EGL P YPGG F+P+GLA D + E+K+KE+KNGRLAM +M GF
Sbjct: 165 AKEGTFLGIEASLEGLQPGYPGGPLFNPMGLAKDIENANEVKLKEIKNGRLAMVAMLGFI 224
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
VQA VT GPI+NL H++DP N
Sbjct: 225 VQASVTHAGPIDNLLTHLSDPFNKN 249
>gi|358346569|ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503274|gb|AES84477.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 268
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DPE+ N + E++H RWAMLGA G
Sbjct: 61 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLSSDPESLKWNVQAELVHCRWAMLGAAG 118
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + I WA ++
Sbjct: 119 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELIFIGWAEGRRWADIL 171
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 172 NPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAV 231
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 232 MGAWFQHIYTGTGPIDNLFAHLADP 256
>gi|412987928|emb|CCO19324.1| predicted protein [Bathycoccus prasinos]
Length = 415
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 110/189 (58%), Gaps = 10/189 (5%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG-VK 88
PSYL G GD +D LS E +N ELE++H RWAML +G PEILS++G ++
Sbjct: 225 PSYLDGTLAGDAQFDPLRLSDTEEKRRRNVELELLHGRWAMLAVVGVCVPEILSRSGALE 284
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNP--NLIHAQSILAIWACQVVLMGFVEGYRIGG---- 142
E +W+K G ++ ++YLG ++ A I+ I CQ VLMG E R G
Sbjct: 285 LSEPIWWKIGEKVLEGIDVNYLGIEGFHIAGASGIIGIAFCQAVLMGGPEYARYVGIESL 344
Query: 143 GPLGEGL--DPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG 199
P+G L D YPGG FDP L+ D ++ EL+V E+K+GRLAM +M G F QA VT
Sbjct: 345 EPVGVYLPGDTNYPGGGPFDPFNLSADAERDVELRVSEVKHGRLAMIAMLGVFAQAFVTR 404
Query: 200 KGPIENLYD 208
+GP+ N+ +
Sbjct: 405 EGPVANVLE 413
>gi|602359|emb|CAA57492.1| Type II chlorophyll a/b binding protein from photosystem I [Pisum
sativum]
Length = 269
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 113/214 (52%), Gaps = 34/214 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G
Sbjct: 62 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAAG 119
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
PE L+K G+ W+ AG Q +Y + ++ ++V +G+
Sbjct: 120 IFIPEFLTKLGI-LNTPSWYTAGEQ-------EYFTD--------TTTLFIVELVFIGWA 163
Query: 136 EGYR---------IGGGPLG-----EGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R + P+ G D YPGG FDPLG P + EL+ KE+K
Sbjct: 164 EGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIK 223
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
NGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 224 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|168057356|ref|XP_001780681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667846|gb|EDQ54465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 111/205 (54%), Gaps = 32/205 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G GD+G+D GL DP+ + E++HSR+AM G G +F ++L +G +
Sbjct: 12 PAHLDGTLAGDFGFDPLGLGQDPQDLRWYVQAELVHSRFAMAGVAGILFTDLLRASG-RT 70
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VWF+AGA F D+ L + Q++LMGFVE R
Sbjct: 71 DIPVWFEAGATKF-----DFADTTTL---------FVVQLILMGFVETKRWMDIVKPGSQ 116
Query: 140 ------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G EGL+ YPGG F+PLG A+DP + L+ KE+KNGRLAM +M GF
Sbjct: 117 AAEDSFFGFEAAFEGLETGYPGGPLFNPLGFANDPTKPQPLRWKEIKNGRLAMVAMVGFM 176
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
VQA VT GPIENL H++DPV N
Sbjct: 177 VQAYVTKTGPIENLLTHLSDPVHNT 201
>gi|297817464|ref|XP_002876615.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297322453|gb|EFH52874.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 50 PDRPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAELVHCRWAMLGAAG 107
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 108 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 160
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V + G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 161 KPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAV 220
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 221 MGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|115472983|ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|34393511|dbj|BAC83072.1| putative photosystem I antenna protein [Oryza sativa Japonica
Group]
gi|113611626|dbj|BAF22004.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|125558916|gb|EAZ04452.1| hypothetical protein OsI_26600 [Oryza sativa Indica Group]
gi|125600834|gb|EAZ40410.1| hypothetical protein OsJ_24861 [Oryza sativa Japonica Group]
gi|215678915|dbj|BAG96345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679008|dbj|BAG96438.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679048|dbj|BAG96478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686399|dbj|BAG87660.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737439|dbj|BAG96569.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737698|dbj|BAG96828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737734|dbj|BAG96864.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767334|dbj|BAG99562.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 56 PDRPIWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAG 113
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 114 IFIPEFLTKIGI-LNTPSWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADII 166
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 167 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAV 226
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + QA TG GPI+NL+ H+ADP
Sbjct: 227 MGAWFQAEYTGTGPIDNLFAHLADP 251
>gi|224100797|ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|222851839|gb|EEE89386.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 244
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 52 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILIPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA + GG YLG P + ++ + A + V + FVE R
Sbjct: 108 ---GLGNWVKAQEWAAAPGGQATYLGQP--VPWGTLPTVLAIEFVAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGFSKDPKKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|388521809|gb|AFK48966.1| unknown [Lotus japonicus]
Length = 241
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 52 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ + A + + + FVE R
Sbjct: 108 ---GLGNWVKAQEWAALPGGQATYLGNP--VPRGTLPTVLAIEFLAISFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|449435085|ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
gi|449529174|ref|XP_004171576.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
Length = 271
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 115/216 (53%), Gaps = 18/216 (8%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
++ P PDRP + P +L G PGD+G+D GL++DPE+ N++ E++H
Sbjct: 54 RTVPVCAAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVH 111
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI- 124
RWAMLGA G PE L+K G+ W+ AG L+Y + + ++ I
Sbjct: 112 CRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVELIFIG 163
Query: 125 WA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKE 177
WA ++ G V I G D YPGG FDPLG P++ EL+ KE
Sbjct: 164 WAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKE 223
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 224 IKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 259
>gi|115467828|ref|NP_001057513.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|3789954|gb|AAC67558.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|54290899|dbj|BAD61582.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113595553|dbj|BAF19427.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|125597037|gb|EAZ36817.1| hypothetical protein OsJ_21156 [Oryza sativa Japonica Group]
gi|215686348|dbj|BAG87609.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704347|dbj|BAG93781.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 52 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL------- 104
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W +A GG YLGNP + ++ I + V + F E R
Sbjct: 105 GLGNWVQAQEWAAEPGGQATYLGNP--VPWGTLPTILVIEFVAIAFAEHQRTMEK----- 157
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G GP+E
Sbjct: 158 -DPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLE 216
Query: 205 NLYDHIADPVANN 217
NL H++DP NN
Sbjct: 217 NLASHLSDPWHNN 229
>gi|551047|emb|CAA55864.1| type II LHCI [Lolium temulentum]
Length = 253
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 116/217 (53%), Gaps = 22/217 (10%)
Query: 4 TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 63
TV++A P+RP + P +L G PGD+G+D GL +DPE+ N + E+
Sbjct: 40 TVRTA------APERPIWFP--GSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAEL 91
Query: 64 IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA 123
+H RWAMLGA G PE+L+K G+ W+ AG Q + + L + IL
Sbjct: 92 VHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFVVELILI 144
Query: 124 IWA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVK 176
WA ++ G V I G D YPGG FDPLG + P++ EL+ K
Sbjct: 145 GWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGNGSPEKLKELRTK 204
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
E+KNGRLAM ++ G + QA TG GPI+NL+ H+ADP
Sbjct: 205 EIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 241
>gi|357122261|ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 258
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 51 PERPIWFP--GSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAG 108
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE+L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 109 IFIPELLTKIGI-LNTPSWYTAGEQTY------FADTTTLFIVELILIGWAEGRRWADII 161
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 162 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGSGSPEKIKELRTKEIKNGRLAMLAV 221
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + QA TG GPI+NL+ H+ADP
Sbjct: 222 MGAWFQAEYTGTGPIDNLFAHLADP 246
>gi|312283035|dbj|BAJ34383.1| unnamed protein product [Thellungiella halophila]
Length = 256
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 49 PERPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNAQAELVHCRWAMLGAAG 106
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 107 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 159
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRLAM ++
Sbjct: 160 KPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAV 219
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 220 MGAWFQHIYTGTGPIDNLFAHLADP 244
>gi|493723|emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D GL P + +E E+IH RWAML G + PE L
Sbjct: 53 QPRPPYLDGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I A + + + FVE R
Sbjct: 109 ---GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR------ 157
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELKVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 158 SMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTG 217
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 218 PLENLATHLADPWHNN 233
>gi|226503327|ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195612072|gb|ACG27866.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195616508|gb|ACG30084.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|223975041|gb|ACN31708.1| unknown [Zea mays]
gi|413935743|gb|AFW70294.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 245
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 53 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I + V + F E R
Sbjct: 109 ---GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRT----- 158
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 159 -MEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 217
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 218 PLENLASHLADPWHNN 233
>gi|164612849|gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 262
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 55 PDRPIWFP--GSVPPPWLDGSLPGDFGFDPFGLGSDPESLRWNVQAELVHCRWAMLGAAG 112
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 113 IFIPEFLTKIGI-LSTPSWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADII 165
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 166 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAV 225
Query: 189 FGFFVQAIVTGKGPIENLYDHIADPVANN 217
G + QA TG GPI+NL+ H+ADP N
Sbjct: 226 MGAWFQAEYTGTGPIDNLFAHLADPGHAN 254
>gi|225425420|ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738455|emb|CBI27656.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GL +DPET + E++H RWAMLGA G
Sbjct: 64 PNRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAG 121
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 122 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDKTTLFIVEMIFIGWAEGRRWADI 173
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG PD+ EL+ KE+KNGRLAM +
Sbjct: 174 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLA 233
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + QAI TG GPI+NL+ H+ADP
Sbjct: 234 VMGAWFQAIYTGTGPIDNLFAHLADP 259
>gi|666054|emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
vulgare]
gi|326493584|dbj|BAJ85253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 48 PERPIWFP--GSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAG 105
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE+L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 106 IFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELILIGWAEGRRWADII 158
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 159 KPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSPEKLKELRTKEIKNGRLAMLAV 218
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + QA TG GPI+NL+ H+ADP
Sbjct: 219 MGAWFQAEYTGTGPIDNLFAHLADP 243
>gi|413935742|gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_802965, partial
[Zea mays]
Length = 273
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 53 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I + V + F E R
Sbjct: 109 ---GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRTMEK-- 161
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 162 ----DPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 217
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 218 PLENLASHLADPWHNN 233
>gi|147841900|emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera]
Length = 272
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GL +DPET + E++H RWAMLGA G
Sbjct: 65 PNRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQSEIVHCRWAMLGAAG 122
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 123 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDKTTLFIVEMIFIGWAEGRRWADI 174
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG PD+ EL+ KE+KNGRLAM +
Sbjct: 175 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPDKIKELRTKEIKNGRLAMLA 234
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + QAI TG GPI+NL+ H+ADP
Sbjct: 235 VMGAWFQAIYTGTGPIDNLFAHLADP 260
>gi|255547714|ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545965|gb|EEF47468.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 270
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G
Sbjct: 63 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + ++ I WA +
Sbjct: 121 IFIPEFLTKIGI-LNTPSWYDAGK-------LEYFTDTTTLFIIELIFIGWAEGRRWADI 172
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 173 LKPGCVNTDPIFPNNRLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 232
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 233 VMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|357465507|ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355492086|gb|AES73289.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 14/192 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YL G PGD+G+D GL DPE+ + E++HSR+AMLG LG + ++L GV
Sbjct: 68 PTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVLGILVTDLLRVAGVN- 126
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
+WF+AGA + ++ L+ Q +L +A M FV EG G
Sbjct: 127 SIPIWFEAGAVKY-----EFANTGTLVVVQLLLMGYAETRRYMDFVSPGSQAKEGSFFGL 181
Query: 143 GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
GL+P YPGG +PLGLA D E K+KE+KNGRLAM ++ G FVQA VT G
Sbjct: 182 EASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVG 241
Query: 202 PIENLYDHIADP 213
PI+NL +H+++P
Sbjct: 242 PIDNLVEHLSNP 253
>gi|388491152|gb|AFK33642.1| unknown [Lotus japonicus]
Length = 241
Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 52 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ + A + + + FVE R
Sbjct: 108 ---GLGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTVLAIEFLAISFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|225690794|gb|ACO06083.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 252
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 107/197 (54%), Gaps = 20/197 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E E+ H RWAML G + PE L
Sbjct: 54 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL---- 109
Query: 87 VKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA +G YLGNP + ++ I A + + + F E R
Sbjct: 110 ---GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRT----- 159
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G G
Sbjct: 160 -MEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 218
Query: 202 PIENLYDHIADPVANNA 218
P+EN H+ADP N +
Sbjct: 219 PLENPGTHLADPWHNTS 235
>gi|356559472|ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Glycine max]
Length = 246
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 54 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 110 ---GLGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAISFVEHQR------ 158
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP F E KVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 159 SMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 218
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 219 PLENLAAHLADPWHNN 234
>gi|224057740|ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222846567|gb|EEE84114.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 272
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G
Sbjct: 65 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVHCRWAMLGAAG 122
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + + I WA +
Sbjct: 123 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVELFFIGWAEGRRWADI 174
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 175 LKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 234
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 235 VMGAWFQHIYTGTGPIDNLFAHLADP 260
>gi|297740654|emb|CBI30836.3| unnamed protein product [Vitis vinifera]
Length = 110
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/117 (59%), Positives = 77/117 (65%), Gaps = 28/117 (23%)
Query: 113 PNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAE 172
PN L I++ +V+LMG VEGYRI GGPLGE
Sbjct: 22 PNTFAKNRELEIFS-EVILMGAVEGYRIAGGPLGE------------------------- 55
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK
Sbjct: 56 --VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 110
>gi|351734432|ref|NP_001235996.1| uncharacterized protein LOC100305992 [Glycine max]
gi|255627211|gb|ACU13950.1| unknown [Glycine max]
Length = 240
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH WAML G + PE L
Sbjct: 48 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCGWAMLAVPGILVPEAL---- 103
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLGNP + ++ I A + + + FVE R
Sbjct: 104 ---GLGNWVKAQEWAAVPGGQATYLGNP--VPWGTLPTILAIEFLAISFVEHQR------ 152
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
G DP YPGGAFDPLG + DP F E KVKELKNGRLA+ + GF V Q+ G G
Sbjct: 153 SMGKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKELKNGRLALLAFVGFCVQQSAYPGTG 212
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 213 PLENLAAHLADPWHNN 228
>gi|223973225|gb|ACN30800.1| unknown [Zea mays]
Length = 196
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 4 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEAL---- 59
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I + V + F E R
Sbjct: 60 ---GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILVIEFVAIAFAEHQRTMEK-- 112
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 113 ----DPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 168
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 169 PLENLASHLADPWHNN 184
>gi|125555124|gb|EAZ00730.1| hypothetical protein OsI_22755 [Oryza sativa Indica Group]
Length = 241
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 20/193 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 52 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL------- 104
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W +A GG YLGNP + ++ I + V + F E R
Sbjct: 105 GLGNWVQAQEWAAEPGGQATYLGNP--VPWGTLPTILVIEFVAIAFAEHQRTMEK----- 157
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + F V Q+ G GP+E
Sbjct: 158 -DPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVAFCVQQSAYPGTGPLE 216
Query: 205 NLYDHIADPVANN 217
NL H++DP NN
Sbjct: 217 NLASHLSDPWHNN 229
>gi|212274977|ref|NP_001130616.1| uncharacterized protein LOC100191715 [Zea mays]
gi|195636368|gb|ACG37652.1| chlorophyll a-b binding protein [Zea mays]
gi|414590632|tpg|DAA41203.1| TPA: chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 109/205 (53%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 53 PNRPIWFP--GSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAG 110
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K GV W+ AG Q + + L + IL WA ++
Sbjct: 111 IFIPEFLTKIGV-LNTPFWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADII 163
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 164 KPGSVNTDPIFPSNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAV 223
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + QA TG GPI+NL+ H+ADP
Sbjct: 224 MGAWFQAEYTGTGPIDNLFAHLADP 248
>gi|356559464|ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL++DPE+ N + E++H RWAMLGA G
Sbjct: 74 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAG 131
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + + I WA +
Sbjct: 132 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVELFFIGWAEGRRWADI 183
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 184 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 243
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 244 VMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|356559462|ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
gi|255645717|gb|ACU23352.1| unknown [Glycine max]
Length = 270
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 110/206 (53%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL++DPE+ N + E++H RWAMLGA G
Sbjct: 63 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + + I WA +
Sbjct: 121 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVELFFIGWAEGRRWADI 172
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 173 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 232
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 233 VMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|145688411|gb|ABO71660.2| LhCa2 protein [Brassica juncea]
Length = 256
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
P+RP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 49 PERPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 106
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE L+K G+ W+ AG Q + + L + IL WA ++
Sbjct: 107 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 159
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG P + EL+ KE+KNGRL M ++
Sbjct: 160 KPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLTMLAV 219
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G + Q I TG GPI+NL+ H+ADP
Sbjct: 220 MGAWFQHIYTGTGPIDNLFAHLADP 244
>gi|149242541|pdb|2O01|2 Chain 2, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 186
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 109/200 (54%), Gaps = 32/200 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G PGD+G+D GLS+DPE+ N + E++HSRWAMLGA G PE L+K G+
Sbjct: 1 PEWLDGSLPGDFGFDPLGLSSDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGI-L 59
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------I 140
W+ AG Q +Y + ++ ++V +G+ EG R +
Sbjct: 60 NTPSWYTAGEQ-------EYFTDTT--------TLFIVELVFIGWAEGRRWADILNPGCV 104
Query: 141 GGGPLG-----EGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFV 193
P+ G D YPGG FDPLG P + EL+ KE+KNGRLAM ++ G +
Sbjct: 105 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIKNGRLAMLAVMGAWF 164
Query: 194 QAIVTGKGPIENLYDHIADP 213
Q I TG GPI+NL+ H+ADP
Sbjct: 165 QHIYTGTGPIDNLFAHLADP 184
>gi|356520200|ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 74 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAG 131
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + + I WA +
Sbjct: 132 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFVVELFFIGWAEGRRWADI 183
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 184 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 243
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 244 VMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|302851787|ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300257220|gb|EFJ41471.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 241
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 26/230 (11%)
Query: 5 VKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 64
VK+A + +W+ + P P++L G GDYG+D L +P+T + E++
Sbjct: 25 VKAATRPVWFPGNPP----------PAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELV 74
Query: 65 HSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI 124
H R+AMLGA G + I +K G+ F E W+ AG + + +D+ P L+ Q L
Sbjct: 75 HGRFAMLGAAGIILTSIGAKVGLGFPE--WYDAGKVVVEKNNIDF---PTLLITQLYLMG 129
Query: 125 WACQVVLMGFVE-GYRIGGGPLG-----EGLDPLYPGGAF-DPLGLAD-DPDQFAELKVK 176
WA F G + G LG +GL+ YPGG F DP+GL+ D D++ E K K
Sbjct: 130 WAETKRWYDFKNPGSQGDGSFLGFTDEFKGLENGYPGGRFFDPMGLSRGDADKYKEYKQK 189
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
E+KNGRLAM + GF Q TGKGP++NL DH+ADP N +ATN V
Sbjct: 190 EIKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADP---NHVNFATNGV 236
>gi|118487538|gb|ABK95596.1| unknown [Populus trichocarpa]
Length = 269
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 112/216 (51%), Gaps = 18/216 (8%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+S + PDRP + P +L G PGD+G+D GL +DPET N + E++H
Sbjct: 52 RSVTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVH 109
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI- 124
RWAMLGA G PE L+K G+ W+ AG L+Y + + + I
Sbjct: 110 CRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFIVELFFIG 161
Query: 125 WA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKE 177
WA ++ G V I G D YPGG FDPLG P++ EL+ KE
Sbjct: 162 WAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKE 221
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 222 IKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|356520198|ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
Length = 270
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 63 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K G+ W+ AG L+Y + + + I WA +
Sbjct: 121 IFIPEFLTKIGI-LNTPSWYTAGE-------LEYFTDTTTLFVVELFFIGWAEGRRWADI 172
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM +
Sbjct: 173 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLA 232
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I TG GPI+NL+ H+ADP
Sbjct: 233 VMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|226499760|ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays]
gi|195622990|gb|ACG33325.1| chlorophyll a-b binding protein [Zea mays]
gi|414887286|tpg|DAA63300.1| TPA: chlorophyll a-b binding protein isoform 1 [Zea mays]
gi|414887287|tpg|DAA63301.1| TPA: chlorophyll a-b binding protein isoform 2 [Zea mays]
gi|414887288|tpg|DAA63302.1| TPA: chlorophyll a-b binding protein isoform 3 [Zea mays]
Length = 270
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 108/204 (52%), Gaps = 16/204 (7%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
DRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 64 DRPIWFP--GSTPPPWLDGSLPGDFGFDPWGLGSDPESLRWNVQAELVHCRWAMLGAAGI 121
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVL 131
PE L+K GV W+ AG Q + + L + IL WA ++
Sbjct: 122 FIPEFLTKIGV-LNTPFWYTAGEQQY------FTDTTTLFIIELILIGWAEGRRWADIIK 174
Query: 132 MGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMF 189
G V I G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++
Sbjct: 175 PGSVNTDPIFPSNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVM 234
Query: 190 GFFVQAIVTGKGPIENLYDHIADP 213
G + QA TG GPI+NL+ H+ADP
Sbjct: 235 GAWFQAEYTGTGPIDNLFAHLADP 258
>gi|124388816|gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
Length = 272
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 107/200 (53%), Gaps = 31/200 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GD+G+D GL DPE+ + E++HSR+AM G G +F ++L G+
Sbjct: 74 PPYLDGTLAGDFGFDPLGLGEDPESLKWYVQAELVHSRFAMAGVAGILFTDLLRTTGLS- 132
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VW++AGA F + ++ Q++LMGFVE R
Sbjct: 133 NLPVWYEAGATKF--------------QFANTTTLFIVQMLLMGFVETKRYMDFKNPGSQ 178
Query: 140 -----IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
G EGL+P YPGG +PLG+A D E K+KE+KNGRLAM ++ G FV
Sbjct: 179 GEASFFGLEAALEGLEPGYPGGPILNPLGIAKDIKNAPEWKLKEIKNGRLAMVAILGIFV 238
Query: 194 QAIVTGKGPIENLYDHIADP 213
QA VT GP+ENL +H++DP
Sbjct: 239 QASVTHVGPLENLVEHLSDP 258
>gi|226530077|ref|NP_001149586.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|194706946|gb|ACF87557.1| unknown [Zea mays]
gi|195628244|gb|ACG35952.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|413926425|gb|AFW66357.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 249
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 105/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E EV H RWAML G + PE L
Sbjct: 57 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEAL---- 112
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I A + V + F E R
Sbjct: 113 ---GLGNWVKAQEWAAVPGGQATYLGAP--VPWGTLPTILAVEFVAIAFAEHQRTMEK-- 165
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 166 ----DPEKKKYPGGAFDPLGFSRDPAKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 221
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 222 PLENLAAHLADPWHNN 237
>gi|255538312|ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223550922|gb|EEF52408.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 269
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 16/205 (7%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
RP +L +P YL G GDYG+D GL DPE+ + E++H+R+AMLG G
Sbjct: 59 QRPTWLPGL--DSPPYLDGTLAGDYGFDPLGLGEDPESLKWYVQAELVHARFAMLGIAGI 116
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV- 135
+F ++L G++ VW++AGA + ++ L+ Q + +A M +V
Sbjct: 117 LFTDLLRVTGIR-KLPVWYEAGAVKY-----EFASTRTLLVVQLLWMGYAETRRYMDYVS 170
Query: 136 ------EGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
EG G EGL+P YPGG +P GLA D + K+KE+KNGRLAM +M
Sbjct: 171 PGSQNKEGSFFGMEAALEGLEPGYPGGPLLNPFGLAKDIRSARDWKLKEIKNGRLAMVAM 230
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G FVQA VT GPI+NL +H++DP
Sbjct: 231 LGIFVQAAVTHTGPIDNLLEHLSDP 255
>gi|449452104|ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
gi|449525097|ref|XP_004169556.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
Length = 246
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 54 QPRPPYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I + + + FVE R
Sbjct: 110 ---GLGNWVKAQEWAAVPGGQATYLGQP--VPWGTLPTILVIEFLAIAFVEHQR------ 158
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP++ E KVKE+KNGRLA+ + GF V Q+ G G
Sbjct: 159 SMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTG 218
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 219 PLENLATHLADPWHNN 234
>gi|388510254|gb|AFK43193.1| unknown [Lotus japonicus]
Length = 213
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 14/192 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YL G GDYG+D GL DPE+ + E++H+R+AMLG G + ++L G+
Sbjct: 14 PAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLS- 72
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA + ++ LI Q +L +A M F+ EG G
Sbjct: 73 KIPVWFEAGAVKY-----EFTNTQTLIIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGL 127
Query: 143 GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
EGL+P YPGG +PLGLA D E K+KE+KNGRLAM ++ G FVQA VT G
Sbjct: 128 EASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVG 187
Query: 202 PIENLYDHIADP 213
PI+NL +H+++P
Sbjct: 188 PIDNLVEHLSNP 199
>gi|224109746|ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222864338|gb|EEF01469.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 243
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 54 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL------- 106
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W KA + GG YLG P + ++ I A + V + FVE R +
Sbjct: 107 GLGNWVKAQEWAATPGGQATYLGQP--VPWGTLPIILAIEFVAIAFVEHQRSMEK---DT 161
Query: 149 LDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIENLY 207
YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + G VQ G GP+ENL
Sbjct: 162 EKKKYPGGAFDPLGYSKDPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLA 221
Query: 208 DHIADPVANN 217
H+ADP NN
Sbjct: 222 THLADPWHNN 231
>gi|388518909|gb|AFK47516.1| unknown [Lotus japonicus]
Length = 266
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 14/192 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YL G GDYG+D GL DPE+ + E++H+R+AMLG G + ++L G+
Sbjct: 67 PAYLDGTLAGDYGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLS- 125
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA + ++ LI Q +L +A M F+ EG G
Sbjct: 126 KIPVWFEAGAVKY-----EFTNTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGSFFGL 180
Query: 143 GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
EGL+P YPGG +PLGLA D E K+KE+KNGRLAM ++ G FVQA VT G
Sbjct: 181 EASFEGLEPGYPGGPLLNPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVG 240
Query: 202 PIENLYDHIADP 213
PI+NL +H+++P
Sbjct: 241 PIDNLVEHLSNP 252
>gi|357124424|ref|XP_003563900.1| PREDICTED: chlorophyll a-b binding protein 1B-21,
chloroplastic-like [Brachypodium distachyon]
Length = 247
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 106/196 (54%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL+ PE F + +E E+ H RWAML G + PE L
Sbjct: 54 QPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL---- 109
Query: 87 VKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA +G Y G P + ++ I A + + + F E R
Sbjct: 110 ---GLGNWVKAQEWAALPDGQATYFGVP--VPWGNLPTILAIEFLAIAFAEQQRT----- 159
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G G
Sbjct: 160 -MEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 218
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 219 PLENLGAHLADPWHNN 234
>gi|118487549|gb|ABK95601.1| unknown [Populus trichocarpa]
Length = 269
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 112/216 (51%), Gaps = 18/216 (8%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+S + PDRP + P +L G PGD+G+D GL +DPET N + E++H
Sbjct: 52 RSVTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVH 109
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI- 124
RWAMLGA G PE L+K G+ W+ AG ++Y + + + I
Sbjct: 110 CRWAMLGAAGIFIPEFLTKIGI-LNTPSWYSAGE-------VEYFTDTTTLFIVELFFIG 161
Query: 125 WA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKE 177
WA ++ G V I G D YPGG FDPLG P++ EL+ KE
Sbjct: 162 WAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKE 221
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 222 IKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|398313943|emb|CCI55398.1| PSI antenna protein Lhca3 [Marchantia polymorpha]
Length = 279
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 114/217 (52%), Gaps = 35/217 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPETFAK------NRELEVIHSRWAMLGALGCVFP 79
SEQ+ SYL G PGDYG+D GLS DP+ R E+I+ R+AMLGA G + P
Sbjct: 65 SEQSLSYLDGSLPGDYGFDPLGLS-DPQGAGGFIDPNWLRYAEIINGRFAMLGAAGAIAP 123
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
EI K G+ E WF+ G I G Y +P ++ ++ LMGF E
Sbjct: 124 EIFGKIGLIPQETAIPWFQTGV-IPPLGQYSYWADP--------YTLFVLEMALMGFAEH 174
Query: 138 YRIGG----GPLGEGL------------DPLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ DP YPGG F+ LG D +LKVKE+KN
Sbjct: 175 RRAQDYYKPGSMGKQYFLGFEKVLGGSGDPAYPGGPLFNFLGFGRDEKSMKDLKVKEVKN 234
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLAM ++ G+F+QAI TG GP +NL DH++DP NN
Sbjct: 235 GRLAMLAVLGYFIQAIFTGVGPFQNLLDHLSDPANNN 271
>gi|224072580|ref|XP_002303791.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222841223|gb|EEE78770.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 269
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 112/216 (51%), Gaps = 18/216 (8%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 65
+S + PDRP + P +L G PGD+G+D GL +DPET N + E++H
Sbjct: 52 RSVTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQAELVH 109
Query: 66 SRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI- 124
RWAMLGA G PE L+K G+ W+ AG ++Y + + + I
Sbjct: 110 CRWAMLGAAGIFIPEFLTKIGI-LNTPSWYSAGE-------VEYFTDTTTLFIVELFFIG 161
Query: 125 WA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKE 177
WA ++ G V I G D YPGG FDPLG P++ EL+ KE
Sbjct: 162 WAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKE 221
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 222 IKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|268612159|pdb|2WSC|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612177|pdb|2WSE|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612195|pdb|2WSF|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 269
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 114/218 (52%), Gaps = 35/218 (16%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G
Sbjct: 62 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHSRWAMLGAAG 119
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
PE L+K G+ W+ AG Q +Y + ++ ++V +G+
Sbjct: 120 IFIPEFLTKLGI-LNTPSWYTAGEQ-------EYFTD--------TTTLFIVELVFIGWA 163
Query: 136 EGYR---------IGGGPLG-----EGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R + P+ G D YPGG FDPLG P + EL+ KE+K
Sbjct: 164 EGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASPQKLKELRTKEIK 223
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLY-DHIADPVAN 216
NGRLAM ++ G + Q I TG GPI+NL+ H+ADP A
Sbjct: 224 NGRLAMLAVMGAWFQHIYTGTGPIDNLFAAHLADPHAT 261
>gi|217071344|gb|ACJ84032.1| unknown [Medicago truncatula]
gi|388494662|gb|AFK35397.1| unknown [Medicago truncatula]
Length = 282
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 102/193 (52%), Gaps = 20/193 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 56 PSYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL------- 108
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W KA GG YLGNP + ++ I + + + FVE R
Sbjct: 109 GLGNWVKAQEWAALPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SME 160
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIE 204
DP YPGGAFDPLG + DP +F E K+KE+KNGRLA+ + G VQ G GP+E
Sbjct: 161 KDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQTAYPGTGPLE 220
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 221 NLATHLADPWHNN 233
>gi|145355794|ref|XP_001422134.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
gi|144582374|gb|ABP00451.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
Length = 281
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 119/223 (53%), Gaps = 36/223 (16%)
Query: 19 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLG 72
P Y+ S+Q+ SYL G PGDYG+D GLS DPE F + L EVIH RWAMLG
Sbjct: 57 PLYVLGNSDQSLSYLDGSLPGDYGFDPLGLS-DPEGAGGFINPQWLAYSEVIHGRWAMLG 115
Query: 73 ALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
G V PE+L G+ E VW+KAG I ++G DY NP I+
Sbjct: 116 VAGMVAPEVLGGLGIIPQETGLVWYKAG-MIPAQGTYDYWANP--------FTIFWINAA 166
Query: 131 LMGFVEGYR---------------IG-GGPLGEGLDPLYPGGAFDPLGLADDPDQFAELK 174
LM F E R IG LG +P YPGG F+ +G A+++
Sbjct: 167 LMNFAELRRAQDYWNPGSMGKQELIGWEKMLGGSGEPAYPGGFFNIMG--QGKSDMAKMR 224
Query: 175 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
VKE+KNGRLAM + F QA++TG+GP++NL DH++DP +N
Sbjct: 225 VKEIKNGRLAMMACFACGAQAVMTGEGPVKNLIDHVSDPFGHN 267
>gi|225449078|ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera]
gi|147800947|emb|CAN75566.1| hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 52 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A GG YLGNP + ++ I A + + + FVE R
Sbjct: 108 ---GLGNWVQAQEWAAIPGGQATYLGNP--VPWGNLPTILAIEFLAIAFVEHQR---SME 159
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
+ YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 160 KDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLE 219
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 220 NLASHLADPWHNN 232
>gi|168011208|ref|XP_001758295.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690330|gb|EDQ76697.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
DRP +L P SE P +L G PGDYG+D L+A+P + E++H RWAMLGA G
Sbjct: 64 DRPLWL-PGSE-APKWLDGSLPGDYGFDPLDLAAEPGRLNWMVQAELVHCRWAMLGAAGI 121
Query: 77 VFPEILSKNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE+L+K G+ W+KAG A F++ G L + +L WA +
Sbjct: 122 FIPELLTKIGI-LNTPSWYKAGDATYFADQG-------TLFIVELLLMAWAESRRWADIA 173
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG D+ E++ KE+KNGRLAM ++
Sbjct: 174 RPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSEDKLKEIRTKEVKNGRLAMLAV 233
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G FVQA VT GPI+NL+ H+ADP
Sbjct: 234 LGAFVQANVTHVGPIDNLFAHLADP 258
>gi|187609488|gb|ACD13267.1| chlorophyll a/b binding protein precursor [Phyllostachys
fimbriligula]
Length = 204
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL PE F + +E EV H RWAML G + PE L
Sbjct: 22 QPRPAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEAL---- 77
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG Y G P + ++ I A + V + F E R
Sbjct: 78 ---GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFVAIAFAEHQRT----- 127
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 128 -MEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 186
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 187 PLENLASHLADPWHNN 202
>gi|226500382|ref|NP_001141936.1| uncharacterized protein LOC100274085 [Zea mays]
gi|194706506|gb|ACF87337.1| unknown [Zea mays]
gi|414884911|tpg|DAA60925.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
gi|414884912|tpg|DAA60926.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 164
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 98/161 (60%), Gaps = 16/161 (9%)
Query: 70 MLGALGCVFPEILSKNG-VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA--QSILAIWA 126
ML ALG V PE+L G V F E VW+K G LDYLG P A Q ++ I
Sbjct: 1 MLAALGVVVPELLDLFGLVHFVEPVWWKVGYAKLQGDNLDYLGIPGFRIAGGQGVVVIAI 60
Query: 127 CQVVLMGFVEGYRIGGGPLGEGLDPL---------YPGG-AFDPLGLADDPDQFAELKVK 176
CQ +LM E R G E L+PL YPGG FDPLGL+ DP F +LKVK
Sbjct: 61 CQALLMVGPEYARYCGI---EALEPLGIYLPGDINYPGGPLFDPLGLSKDPVAFEDLKVK 117
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
E+KNGRLAM + FGF++QA VTGKGP++NL +H++DP+ NN
Sbjct: 118 EIKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLSDPLNNN 158
>gi|296086034|emb|CBI31475.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 104/193 (53%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 9 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEAL---- 64
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A GG YLGNP + ++ I A + + + FVE R
Sbjct: 65 ---GLGNWVQAQEWAAIPGGQATYLGNP--VPWGNLPTILAIEFLAIAFVEHQR---SME 116
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIE 204
+ YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF V Q+ G GP+E
Sbjct: 117 KDTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLE 176
Query: 205 NLYDHIADPVANN 217
NL H+ADP NN
Sbjct: 177 NLASHLADPWHNN 189
>gi|388508808|gb|AFK42470.1| unknown [Lotus japonicus]
Length = 259
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 116/225 (51%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE + E++H+RWAMLG G
Sbjct: 52 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPIGLGSDPELLKWLAQAELMHARWAMLGVSG 109
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE+L K G W++AG Q +Y +P ++ Q+ LMG+V
Sbjct: 110 ILIPELLEKMGY-VENYSWYEAGTQ-------EYFADPT--------TLFIVQLALMGWV 153
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P ++P YPGG FDP+ P+ L+ KE+K
Sbjct: 154 EGRRWADLVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIK 213
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF+ QAI TG+GPIENL H+ADP N ++ T+
Sbjct: 214 NGRLAMLAFVGFWFQAIYTGQGPIENLMAHLADPGHCNIFSAFTS 258
>gi|224137478|ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
gi|222835451|gb|EEE73886.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
Length = 266
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 115/210 (54%), Gaps = 16/210 (7%)
Query: 12 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 71
+ + RP +L P YL G GD+G+D GL DP++ + E++H+R+AM
Sbjct: 51 VVHAQQRPTWLPGLDP--PPYLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHARFAMA 108
Query: 72 GALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL 131
G G +F ++L G++ VW++AGA F ++ LI Q +L +A
Sbjct: 109 GVAGILFTDLLRVTGIR-KLPVWYEAGAVKF-----EFASTRTLIVVQLLLMGFAETKRY 162
Query: 132 MGFV-------EGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRL 183
M FV EG G EGL+P YPGG +PLGLA D + K+KE+KNGRL
Sbjct: 163 MDFVSPGSQAKEGSFFGLESALEGLEPGYPGGPLLNPLGLARDIENAHVWKLKEIKNGRL 222
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
AM +M G FVQA VT GPI+NL +H+++P
Sbjct: 223 AMVAMVGIFVQAAVTHAGPIDNLIEHLSNP 252
>gi|168060921|ref|XP_001782441.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666112|gb|EDQ52776.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
DRP +L P SE P +L G PGDYG+D L+A+P + E++H RWAMLGA G
Sbjct: 13 DRPLWL-PGSE-APKWLDGSLPGDYGFDPLDLAAEPGRLNWMVQAELVHCRWAMLGAAGI 70
Query: 77 VFPEILSKNGVKFGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVV 130
PE+L+K G+ W+KAG A F++ G L + +L WA +
Sbjct: 71 FIPELLTKIGI-LNTPSWYKAGDATYFADQG-------TLFIVELLLMAWAESRRWADIA 122
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSM 188
G V I G D YPGG FDPLG D+ E++ KE+KNGRLAM ++
Sbjct: 123 RPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSEDKLKEIRTKEVKNGRLAMLAV 182
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
G FVQA VT GPI+NL+ H+ADP
Sbjct: 183 LGAFVQANVTHVGPIDNLFAHLADP 207
>gi|242066618|ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
gi|241934429|gb|EES07574.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
Length = 266
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 111/220 (50%), Gaps = 34/220 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
G RP +L P +L G PGD+G+D GL DP + + E++H R+AM G
Sbjct: 56 GTQRPTWLPGLDP--PPHLDGTLPGDFGFDPLGLGEDPASLKWYVQAELVHCRFAMAGVA 113
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G +F ++L +G VWF+AGA F + A++ Q++LMGF
Sbjct: 114 GILFTDLLRVSG-NSDLPVWFEAGAAKFEFA--------------NTTALFFVQLLLMGF 158
Query: 135 VEGYR----------------IGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKE 177
E R IG G P YPGG F+PLGLA D + E K+KE
Sbjct: 159 AETKRYMDFKNPGSQAEEGTFIGLEAALAGQQPGYPGGPLFNPLGLAKDIENAHEEKLKE 218
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAM +M GF VQA VT GPI+NL H++DP N
Sbjct: 219 IKNGRLAMVAMLGFMVQASVTHAGPIDNLLTHLSDPFNKN 258
>gi|168041250|ref|XP_001773105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675652|gb|EDQ62145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 105/190 (55%), Gaps = 15/190 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYL G PGD+G+D GL PE + +E E+IH+RWAML G + PE L
Sbjct: 54 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEAL------- 106
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W A + GG YLGNP + ++ I A + + + F E R G P E
Sbjct: 107 GYGNWVSAQKWAATPGGQATYLGNP--VPWGNLPVILAIEFLAIAFAESQR-NGEPDPEK 163
Query: 149 LDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIENLY 207
YPGGAFDPLG + + ELK+KE+KNGRLA+ + GF VQAI G GP+ENL
Sbjct: 164 RK--YPGGAFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFAVQAIAYPGTGPLENLK 220
Query: 208 DHIADPVANN 217
H+ADP N
Sbjct: 221 THLADPWHNT 230
>gi|116779438|gb|ABK21282.1| unknown [Picea sitchensis]
gi|116782291|gb|ABK22450.1| unknown [Picea sitchensis]
gi|116784092|gb|ABK23211.1| unknown [Picea sitchensis]
gi|116786476|gb|ABK24121.1| unknown [Picea sitchensis]
gi|116791795|gb|ABK26112.1| unknown [Picea sitchensis]
gi|116791985|gb|ABK26188.1| unknown [Picea sitchensis]
gi|116792462|gb|ABK26376.1| unknown [Picea sitchensis]
gi|148908663|gb|ABR17439.1| unknown [Picea sitchensis]
gi|224284338|gb|ACN39904.1| unknown [Picea sitchensis]
gi|224284452|gb|ACN39960.1| unknown [Picea sitchensis]
gi|224284659|gb|ACN40062.1| unknown [Picea sitchensis]
gi|224284741|gb|ACN40101.1| unknown [Picea sitchensis]
gi|224285484|gb|ACN40463.1| unknown [Picea sitchensis]
Length = 278
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 102/191 (53%), Gaps = 14/191 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G P D+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+
Sbjct: 83 PPWLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLGI-L 141
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIGGGP 144
W+ AG Q + + L + I WA ++ G V I
Sbjct: 142 NTPSWYTAGEQEY------FTDKTTLFVVEMIFLGWAEGRRWADIIKPGSVNTDPIFPNN 195
Query: 145 LGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 202
G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++ G + QA TG GP
Sbjct: 196 KLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGP 255
Query: 203 IENLYDHIADP 213
I+NL H+ADP
Sbjct: 256 IDNLLAHLADP 266
>gi|168052965|ref|XP_001778909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669663|gb|EDQ56245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 105/193 (54%), Gaps = 21/193 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYL G PGD+G+D GL PE + +E E+IH+RWAML G + PE L
Sbjct: 11 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEAL------- 63
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W A + GG YLGNP + ++ I A + + + F E R G
Sbjct: 64 GYGNWVSAQKWAATPGGQATYLGNP--VPWGTLPVILAVEFIAIAFAESQRNGES----- 116
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIE 204
DP YPGGAFDP+G + + ELK+KE+KNGRLA+ + GF +QAI G GP+E
Sbjct: 117 -DPEKRKYPGGAFDPMGFSKGAN-LEELKLKEIKNGRLALVAFLGFAIQAIAYPGTGPLE 174
Query: 205 NLYDHIADPVANN 217
NL H+ADP N
Sbjct: 175 NLKTHLADPWHNT 187
>gi|384247026|gb|EIE20514.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169]
Length = 229
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 107/200 (53%), Gaps = 17/200 (8%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
TP+YL G PG +G+D GL + P + +E E++HSRWAM G G + E+L
Sbjct: 41 SDTPAYLDG-LPGSFGFDPFGLGSTPANLQRFQEAELVHSRWAMAGVAGALGAELL---- 95
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G+ W++A + G YLG P + ++LAI + V + E R P
Sbjct: 96 ---GQGDWYQAPLWAVNGGAPTYLGIPVPFNLSTLLAI---EFVAIAGAEAQR-NAEPDA 148
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E YPGGAFDPLG + D E K+KELKNGRLAM + GF Q TGKGP+E L
Sbjct: 149 EKRK--YPGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEAL 206
Query: 207 YDHIADPVANNAWAYATNFV 226
H+ADP N +ATN V
Sbjct: 207 KLHLADPWGAN---FATNGV 223
>gi|225458605|ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|302142320|emb|CBI19523.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 32/201 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G GD+G+D GL DPE + E++H+R+AM G G + ++L G+
Sbjct: 66 PPYLNGTLAGDFGFDPLGLGEDPENLRWYVQAELVHARFAMAGVAGILVTDLLRVTGIS- 124
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VW++AGA F + A++ Q++LMGFVE R
Sbjct: 125 NLPVWYEAGAVKFEFASTE--------------ALFIVQLILMGFVETKRYMDFTNPGSQ 170
Query: 140 ------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G EGL+P YPGG +PLGLA D + K+KE+KNGRLAM +M G F
Sbjct: 171 AKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEIKNGRLAMVAMLGVF 230
Query: 193 VQAIVTGKGPIENLYDHIADP 213
VQA VT GPIENL +H+++P
Sbjct: 231 VQASVTHAGPIENLVEHLSNP 251
>gi|226498858|ref|NP_001148187.1| LOC100281795 [Zea mays]
gi|195616580|gb|ACG30120.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 269
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D GL +PE + E++H R+AM G G +F ++L +G
Sbjct: 72 PPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG-NS 130
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA F D+ L Q L +A M F EG IG
Sbjct: 131 DLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGL 185
Query: 143 GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G P YPGG F+PLGLA D + + K+KE+KNGRLAM +M GF VQA VT G
Sbjct: 186 EAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAG 245
Query: 202 PIENLYDHIADPVANN 217
PI+NL H++DP N
Sbjct: 246 PIDNLLTHLSDPFNKN 261
>gi|413939030|gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 315
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D GL +PE + E++H R+AM G G +F ++L +G
Sbjct: 118 PPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG-NS 176
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA F D+ L Q L +A M F EG IG
Sbjct: 177 DLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGL 231
Query: 143 GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G P YPGG F+PLGLA D + + K+KE+KNGRLAM +M GF VQA VT G
Sbjct: 232 EAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAG 291
Query: 202 PIENLYDHIADPVANN 217
PI+NL H++DP N
Sbjct: 292 PIDNLLTHLSDPFNKN 307
>gi|194704284|gb|ACF86226.1| unknown [Zea mays]
Length = 269
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D GL +PE + E++H R+AM G G +F ++L +G
Sbjct: 72 PPYLDGTLPGDFGFDPLGLGEEPEALKWYVQAELVHCRFAMAGVAGILFTDLLRVSG-NS 130
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA F D+ L Q L +A M F EG IG
Sbjct: 131 DLPVWFEAGAAKF-----DFANTTALFFVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGL 185
Query: 143 GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G P YPGG F+PLGLA D + + K+KE+KNGRLAM +M GF VQA VT G
Sbjct: 186 EAALAGQQPGYPGGPLFNPLGLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAG 245
Query: 202 PIENLYDHIADPVANN 217
PI+NL H++DP N
Sbjct: 246 PIDNLLTHLSDPFNKN 261
>gi|168049224|ref|XP_001777064.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671629|gb|EDQ58178.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 120/218 (55%), Gaps = 35/218 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + P
Sbjct: 10 SKQSLSYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAP 68
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
E+L + G+ E WF++G I G Y +P ++ ++ LMGF E
Sbjct: 69 EVLGRIGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEH 119
Query: 138 YRIGG----GPLGE----GLD--------PLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL+ P YPGG F+ LG + + ELKVKE+KN
Sbjct: 120 RRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKN 179
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
GRLAM ++ G+F QAI TG GP +NL DH+ADPV NN
Sbjct: 180 GRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 217
>gi|168065932|ref|XP_001784899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663529|gb|EDQ50288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 120/218 (55%), Gaps = 35/218 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + P
Sbjct: 10 SKQSLSYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAP 68
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
E+L + G+ E WF++G I G Y +P ++ ++ LMGF E
Sbjct: 69 EVLGRIGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEH 119
Query: 138 YRIGG----GPLGE----GLD--------PLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL+ P YPGG F+ LG + + ELKVKE+KN
Sbjct: 120 RRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKN 179
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
GRLAM ++ G+F QAI TG GP +NL DH+ADPV NN
Sbjct: 180 GRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 217
>gi|168049170|ref|XP_001777037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671602|gb|EDQ58151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 120/218 (55%), Gaps = 35/218 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ SYL G PGDYG+D GL DPE F + L E+I+ R+AMLGA G + P
Sbjct: 28 SKQSLSYLDGTLPGDYGFDPLGL-MDPEGAGGFIDPQWLPYAEIINGRFAMLGAAGAIAP 86
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
E+L + G+ E WF++G I G Y +P ++ ++ LMGF E
Sbjct: 87 EVLGRIGLIPQETAIPWFQSGV-IPPVGNYSYWADP--------YTLFVLEMALMGFAEH 137
Query: 138 YRIGG----GPLGE----GLD--------PLYPGG-AFDPLGLADDPDQFAELKVKELKN 180
R G +G+ GL+ P YPGG F+ LG + + ELKVKE+KN
Sbjct: 138 RRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGKNEKELQELKVKEVKN 197
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNA 218
GRLAM ++ G+F QAI TG GP +NL DH+ADPV NN
Sbjct: 198 GRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNV 235
>gi|168041643|ref|XP_001773300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675342|gb|EDQ61838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 105/193 (54%), Gaps = 21/193 (10%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYL G PGD+G+D GL PE + +E E+IH+RWAML G + PE L
Sbjct: 11 PSYLDGSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAIPGVLIPEAL------- 63
Query: 90 GEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
G W A + GG YLGNP + ++ I A + + + FVE R G
Sbjct: 64 GYGNWVSAQKWAATPGGQATYLGNP--VPWGNLPIILAVEFIAIAFVESQRNGES----- 116
Query: 149 LDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIE 204
DP YPGG FDPLG + + ELK+KE+KNGRLA+ + GF VQA+ G GP+E
Sbjct: 117 -DPEKRKYPGGPFDPLGFSKGAN-LEELKLKEIKNGRLALVAFLGFVVQAVAYPGTGPLE 174
Query: 205 NLYDHIADPVANN 217
NL H+ADP N
Sbjct: 175 NLKTHLADPWHNT 187
>gi|302854202|ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300256072|gb|EFJ40348.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 228
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
P++L + PG+YG+D L DP + + E EVIH RWAMLG G + E+L
Sbjct: 43 SDAPAWLPDDLPGNYGFDPLSLGKDPASLKRFTESEVIHGRWAMLGVAGALAVELL---- 98
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G W+ A + G + G ++LA + V M EG R G +
Sbjct: 99 ---GYGNWYDAPLWAVTGGKATWFGIEVPFDLNTLLAF---EFVAMAAAEGQRNDAGGV- 151
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+YPGGAFDPLG A D + ELK+KE+KNGRLAM + GF Q TGKGP+ L
Sbjct: 152 -----IYPGGAFDPLGFAKDSSKAGELKLKEIKNGRLAMVAFLGFIAQHAATGKGPLAAL 206
Query: 207 YDHIADPVANNAWAYATNFV 226
+H+A+P N +ATN V
Sbjct: 207 GEHLANPWGAN---FATNGV 223
>gi|145079812|tpg|DAA05938.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Micromonas sp. CCMP490]
Length = 309
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 119/228 (52%), Gaps = 43/228 (18%)
Query: 21 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGAL 74
YL S+Q +YL G PGD+G+D G+S DPE F + L EVIH RWAMLG
Sbjct: 86 YLMGVSDQNMTYLDGTLPGDFGFDPLGMS-DPEGQGGFVNPQWLAYSEVIHGRWAMLGVA 144
Query: 75 GCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
G V PE+L G+ + VWFK+GA I +G DY +P I W +VLM
Sbjct: 145 GVVAPEVLGGMGIIPADTGLVWFKSGA-IPPQGTFDYWADPTTI-------FW-VNMVLM 195
Query: 133 GFVEGYR---------IGGGPL--------GEGLDPLYPGGA---FDPLGLADDPDQFAE 172
F E R G PL G G P YPGG F LG D A+
Sbjct: 196 NFAEVKRGQDYWYPGSQGETPLMGWEKGFAGSGA-PAYPGGKYFNFANLGKTD----MAK 250
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
++ KE+KNGRLAM + G VQA+ TG+GP +N+ DHI+DP ANN A
Sbjct: 251 MQKKEIKNGRLAMMAFLGIAVQAVATGEGPFKNIVDHISDPFANNMLA 298
>gi|18376587|emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI type II precursor
[Picea abies]
Length = 278
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G P D+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+
Sbjct: 83 PPWLDGSLPADFGFDPLGLGSDPETLKWNVQSELVHCRWAMLGAAGIFIPELLTKLGI-L 141
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR----IGGGPL 145
W+ AG L+Y + ++ +++ +G+ EG R I G +
Sbjct: 142 NTPSWYTAGE-------LEYFTDKT--------TLFVVEMIFLGWAEGRRWADIIKPGSV 186
Query: 146 G----------EGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFV 193
G D YPGG FDPLG P++ EL+ KE+KNGRLAM ++ G +
Sbjct: 187 NTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWF 246
Query: 194 QAIVTGKGPIENLYDHIADP 213
QA TG GPI+NL H+ADP
Sbjct: 247 QAEYTGTGPIDNLLAHLADP 266
>gi|358249066|ref|NP_001239987.1| uncharacterized protein LOC100794944 [Glycine max]
gi|255635762|gb|ACU18230.1| unknown [Glycine max]
Length = 267
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G
Sbjct: 60 PDRPLWFP--GSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAG 117
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI-WA-----CQV 129
PE L+K GV W+ AG L+Y + + + I WA +
Sbjct: 118 IFIPEFLTKIGV-LNTPSWYSAGE-------LEYFTDTTTLFIVELFFIGWAEGRRWADI 169
Query: 130 VLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFS 187
+ G V I G D YPGG FDPLG P + +L+ KE+KNGRLAM +
Sbjct: 170 IKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPQKIKDLRTKEIKNGRLAMLA 229
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADP 213
+ G + Q I T GPI+NL+ H+ADP
Sbjct: 230 VMGAWFQHIYTATGPIDNLFAHLADP 255
>gi|157837283|gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 246
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 103/196 (52%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL PE F + +E EV H RWAML G + PE L
Sbjct: 54 QPRPAHLDGSSPGDFGFDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG Y G P + ++ I A + + + F E R
Sbjct: 110 ---GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFLAIAFAEHQRT----- 159
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + E K+KE+KNGRLAM + GF V Q+ G G
Sbjct: 160 -MEKDPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 218
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 219 PLENLASHLADPWHNN 234
>gi|74272669|gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
incerta]
Length = 241
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 114/206 (55%), Gaps = 16/206 (7%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
P++L G GDYG+D L + ET + E++H R+AMLGA G + I +K G+
Sbjct: 39 APAHLDGTLAGDYGFDPLFLGQEKETLRWYVQAELVHGRFAMLGAAGIILTSIGAKVGLG 98
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE-GYRIGGGPLG- 146
F E W+ AG + + +D+ P LI Q L WA F G + G LG
Sbjct: 99 FPE--WYDAGKVVVEKNNIDF---PTLIVIQFYLMGWAETKRWYDFKNPGSQADGSFLGF 153
Query: 147 ----EGLDPLYPGGAF-DPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 200
+GL+ YPGG F DP+GL+ D ++AE K KE+KNGRLAM + GF Q TGK
Sbjct: 154 TEEFKGLENGYPGGRFFDPMGLSRGDAAKYAEYKQKEVKNGRLAMIACLGFAAQYAATGK 213
Query: 201 GPIENLYDHIADPVANNAWAYATNFV 226
GP++NL DH+ADP N +ATN V
Sbjct: 214 GPLDNLSDHLADP---NHINFATNGV 236
>gi|224069184|ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
gi|222833488|gb|EEE71965.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
Length = 261
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 114/225 (50%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ + E+IH RWAML A G
Sbjct: 54 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAG 111
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G WF AG + +Y +P ++ Q++LMG++
Sbjct: 112 ILIPEWLERLGF-IDNFNWFDAGTR-------EYFADPT--------TLFVVQLILMGWI 155
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P +DP YPGG FDP P+ ++ KE+K
Sbjct: 156 EGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGLWFDPWNWGRGSPEPVMAIRTKEIK 215
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF+ QAI TG+GPI+NL HIADP N ++ T+
Sbjct: 216 NGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTS 260
>gi|118489607|gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 261
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 114/225 (50%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ + E+IH RWAML A G
Sbjct: 54 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPESLKWFAQAELIHGRWAMLAAAG 111
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G WF AG + +Y +P ++ Q++LMG++
Sbjct: 112 ILIPEWLERLGF-IDNFNWFDAGTR-------EYFADPT--------TLFVVQLILMGWI 155
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P +DP YPGG FDP P+ ++ KE+K
Sbjct: 156 EGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYPGGLWFDPWNWGRGSPEPVMAIRTKEIK 215
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF+ QAI TG+GPI+NL HIADP N ++ T+
Sbjct: 216 NGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTS 260
>gi|255550389|ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223544731|gb|EEF46247.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 297
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE + E++HSRWAML G
Sbjct: 90 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVAG 147
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L G WF AGA+ +Y +P ++ Q+VLMG+V
Sbjct: 148 ILIPEWLESLGF-IENYNWFDAGAR-------EYFADPT--------TLFIVQLVLMGWV 191
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P ++P YPGG FDPL P+ L+ KE+K
Sbjct: 192 EGRRWADMIKPGCVDIEPTLPNKTKPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIK 251
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QA+ TG+GPIENL HIADP N ++ T+
Sbjct: 252 NGRLAMLAFVGFCFQAVYTGEGPIENLMAHIADPGHCNIFSAFTS 296
>gi|225444667|ref|XP_002277280.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738533|emb|CBI27778.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE + E++HSRWAML G
Sbjct: 52 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAG 109
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W+ AGAQ ++ +P ++ Q+ LMG+V
Sbjct: 110 ILIPECLERLGF-IENFSWYDAGAQ-------EFFADPT--------TLFVVQLALMGWV 153
Query: 136 EGYR----IGGGPLGEGL----------DPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R I G + L D YPGG FDP P+ L+ KE+K
Sbjct: 154 EGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIK 213
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QAI TG+GPIENL HIADP N ++ T+
Sbjct: 214 NGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 258
>gi|116784661|gb|ABK23427.1| unknown [Picea sitchensis]
gi|116785117|gb|ABK23601.1| unknown [Picea sitchensis]
Length = 247
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P +L G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 54 QPRPPHLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A G YLG P + + I A + + + FVE R G P
Sbjct: 110 ---GLGNWVEAQKWAAIPGNQATYLGAP--VPWGYLPVILAVEFLSIAFVESQR-NGEPD 163
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPIE 204
E YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF VQA G GP+E
Sbjct: 164 PEKRK--YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLE 221
Query: 205 NLYDHIADPVANN 217
NL H++DP N
Sbjct: 222 NLATHLSDPWHKN 234
>gi|116794024|gb|ABK26977.1| unknown [Picea sitchensis]
Length = 247
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 102/193 (52%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P +L G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 54 QPRPPHLDGSAPGDFGFDPLRLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A G YLG P + + I A + + + FVE R G P
Sbjct: 110 ---GLGNWVEAQKWAAIPGNQATYLGAP--VPWGYLPVILAVEFLSIAFVESQR-NGEPD 163
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPIE 204
E YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF VQA G GP+E
Sbjct: 164 PEKRK--YPGGAFDPLGFSKDPAKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLE 221
Query: 205 NLYDHIADPVANN 217
NL H++DP N
Sbjct: 222 NLATHLSDPWHKN 234
>gi|302142798|emb|CBI20093.3| unnamed protein product [Vitis vinifera]
Length = 84
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 75/125 (60%), Gaps = 48/125 (38%)
Query: 105 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLA 164
GGLDYLGNPNL GYRIGGGPLGE
Sbjct: 8 GGLDYLGNPNL---------------------GYRIGGGPLGE----------------- 29
Query: 165 DDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
VKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATN
Sbjct: 30 ----------VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATN 79
Query: 225 FVPGK 229
FVPGK
Sbjct: 80 FVPGK 84
>gi|384246844|gb|EIE20333.1| light-harvesting chlorophyll a/b-binding protein Lhca2 [Coccomyxa
subellipsoidea C-169]
Length = 246
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 123/227 (54%), Gaps = 41/227 (18%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPE-------TFAKNRELEVIHSRWAMLGALGCVF 78
S+Q+ SYLTG P DYG+D GL DPE + A + EVIH+RWAMLGA GC+
Sbjct: 29 SDQSLSYLTGALPADYGFDPLGL-LDPEGKGAGFVSPAWLQYSEVIHARWAMLGAAGCIA 87
Query: 79 PEILSKNGV---KFGEAVWFKAGAQIFSEGGLD-YLGNPNLIHAQSILAIWACQVVLMGF 134
PEIL+ GV E +WFK+G I G D Y +P +++ +V+L+ F
Sbjct: 88 PEILATAGVIPQTPDEVIWFKSGV-IPPAGVYDKYWLDP--------YSLFFIEVILVQF 138
Query: 135 VE---------------GYRIGGGPLGEGL-DPLYPGGAFDPLGLADDPDQFAELKVKEL 178
E Y +G + +G DP YPGG F L D ELK KEL
Sbjct: 139 AELRRWQDFRNPGSQGKQYFLGLEEVLKGSGDPSYPGGQFFNLFNLGKSD-LKELKTKEL 197
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
KNGRLAM ++FG+ QA++T +GP +NL DH++DP +N TNF
Sbjct: 198 KNGRLAMLAVFGYGAQAVITAEGPFKNLTDHLSDPTGHN---ILTNF 241
>gi|255585090|ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526931|gb|EEF29136.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 244
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 52 QPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL---- 107
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG YLG P + ++ I + + + FVE R
Sbjct: 108 ---GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILVIEFLAIAFVEHQR------ 156
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + G V Q+ G G
Sbjct: 157 SMEKDPEKKKYPGGAFDPLGYSKDPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTG 216
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 217 PLENLATHLADPWHNN 232
>gi|116784586|gb|ABK23400.1| unknown [Picea sitchensis]
gi|148907739|gb|ABR16996.1| unknown [Picea sitchensis]
gi|224284102|gb|ACN39788.1| unknown [Picea sitchensis]
Length = 247
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G PGD+G+D GL PE + +E E+IH RWAML G + PE L
Sbjct: 54 QPRPAHLDGSAPGDFGFDPLGLGVVPENLERYKESELIHCRWAMLAVPGVLIPEAL---- 109
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNP-NLIHAQSILAIWACQVVLMGFVEGYRIGGGP 144
G W +A GG YLG P + IL+I+ + M F E R G
Sbjct: 110 ---GLGNWVEAQKWAAIPGGQATYLGVPVPWGYFPIILSIFFLK---MAFAESQRNGEPD 163
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPI 203
L + YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF VQA G GP+
Sbjct: 164 LEKRK---YPGGAFDPLGFSKDPAKFEEYKVKEIKNGRLALLAFVGFCVQASANPGTGPL 220
Query: 204 ENLYDHIADPVANN 217
ENL H++DP N
Sbjct: 221 ENLATHLSDPWHKN 234
>gi|255085312|ref|XP_002505087.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226520356|gb|ACO66345.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 242
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 109/206 (52%), Gaps = 14/206 (6%)
Query: 18 RPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 77
RP +L P S P++L G P DYG+D L ADPE + E++H RWAMLG G V
Sbjct: 42 RPTWL-PGSP-APAHLDGTLPCDYGFDPLNLGADPENLKWFVQAELMHCRWAMLGLAGMV 99
Query: 78 FPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLM 132
PE+L+K G+ W AG +LG L Q + WA +
Sbjct: 100 GPELLTKIGMA-DLPNWIDAGKWDGY-----WLGAGPLFFVQMAMMNWAEVRRWQDMKAP 153
Query: 133 GFVEGYRIGGGPLGE-GLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
G + + G G+ D YP G FDP+G A DP + ELK KE+ NGRLAM ++ G
Sbjct: 154 GTMNEDPLTGANKGDTNTDVGYPKGLFDPMGYAKDPKKAEELKRKEIANGRLAMVAIVGC 213
Query: 192 FVQAIVTGKGPIENLYDHIADPVANN 217
F QAI TG GP++NL+ H+ADP NN
Sbjct: 214 FAQAISTGTGPVDNLFTHLADPGHNN 239
>gi|4139222|gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii]
gi|40714519|dbj|BAD06923.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 228
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
P++L + PG+YG+D L +P + + E EVIH RWAMLG G + E+L
Sbjct: 43 SDAPAWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL---- 98
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G W+ A + G + G ++LA + V M EG R G
Sbjct: 99 ---GYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------G 146
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+ +YPGGAFDPLG A D + ELK+KE+KNGRLAM + GF Q TGKGPI L
Sbjct: 147 DAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAAL 206
Query: 207 YDHIADPVANNAWAYATN 224
+H+A+P N +ATN
Sbjct: 207 GEHLANPWGAN---FATN 221
>gi|18125|emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
P++L + PG+YG+D L +P + + E EVIH RWAMLG G + E+L
Sbjct: 39 SDAPAWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL---- 94
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G W+ A + G + G ++LA + V M EG R G
Sbjct: 95 ---GYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------G 142
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+ +YPGGAFDPLG A D + ELK+KE+KNGRLAM + GF Q TGKGPI L
Sbjct: 143 DAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAAL 202
Query: 207 YDHIADPVANNAWAYATN 224
+H+A+P N +ATN
Sbjct: 203 GEHLANPWGAN---FATN 217
>gi|40714521|dbj|BAD06924.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 241
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 114/205 (55%), Gaps = 16/205 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G GDYG+D L +P+T + E++H R+AMLGA G + I +K G+ F
Sbjct: 40 PAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAMLGAAGIILTSIGAKVGLGF 99
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE-GYRIGGGPLG-- 146
E W+ AG + + +D+ P L+ Q L WA F G + G LG
Sbjct: 100 PE--WYDAGKVVVEKNNIDF---PTLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFT 154
Query: 147 ---EGLDPLYPGGAF-DPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
+GL+ YPGG F DP+GL+ D ++ E K KE+KNGRLAM + GF Q TGKG
Sbjct: 155 EEFKGLENGYPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKG 214
Query: 202 PIENLYDHIADPVANNAWAYATNFV 226
P++NL DH+ADP N +ATN V
Sbjct: 215 PLDNLADHLADP---NHVNFATNGV 236
>gi|115448873|ref|NP_001048216.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|46805727|dbj|BAD17114.1| putative light-harvesting chlorophyll-a/b protein of photosystem I
[Oryza sativa Japonica Group]
gi|113537747|dbj|BAF10130.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|215694704|dbj|BAG89895.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623725|gb|EEE57857.1| hypothetical protein OsJ_08493 [Oryza sativa Japonica Group]
Length = 261
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 105/196 (53%), Gaps = 14/196 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G PGD+G+D GL +P + E++H R+AM G G + +++ +G+
Sbjct: 64 PPHLDGTLPGDFGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDLIRVSGIN- 122
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA F D+ L Q +L +A M F+ EG +G
Sbjct: 123 NLPVWFEAGATKF-----DFANTTALFFVQLLLMGFAETKRYMDFINPGSQAEEGTFLGI 177
Query: 143 GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G P YPGG F+PLGLA D + E K+KE+KNGRLAM +M GF VQA VT G
Sbjct: 178 EAALAGSQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVG 237
Query: 202 PIENLYDHIADPVANN 217
PI+NL H++DP N
Sbjct: 238 PIDNLLTHLSDPFNKN 253
>gi|147795581|emb|CAN69989.1| hypothetical protein VITISV_024400 [Vitis vinifera]
Length = 229
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 113/225 (50%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE + E++HSRWAML G
Sbjct: 22 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAG 79
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W+ AGAQ ++ +P ++ Q+ LMG+V
Sbjct: 80 ILIPECLERLGF-IENFSWYDAGAQ-------EFFADPT--------TLFVVQLALMGWV 123
Query: 136 EGYR----IGGGPLGEGL----------DPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R I G + L D YPGG FDP P+ L+ KE+K
Sbjct: 124 EGRRWADLINPGCVDIQLTFPNKAKPKPDVGYPGGLWFDPFMWGRGSPEPVMVLRTKEIK 183
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QAI TG+GPIENL HIADP N ++ T+
Sbjct: 184 NGRLAMLAFVGFCFQAIYTGEGPIENLMAHIADPGHCNVFSAFTS 228
>gi|303290578|ref|XP_003064576.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226454174|gb|EEH51481.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 286
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 40/243 (16%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKN 58
+ VK+ P+S YL S+Q +YL G PGD+G+D G+S DPE F
Sbjct: 49 KAVVKAQPRS-----KDDLYLMGVSDQNMAYLDGTLPGDFGFDPLGMS-DPEGAGGFVNP 102
Query: 59 REL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLGNP 113
+ L EVIH RWAMLG G V PEIL + G+ + VWF +GA I +G DY NP
Sbjct: 103 QWLAYSEVIHGRWAMLGVAGIVAPEILGQAGLIPESTGLVWFTSGA-IPPQGTFDYWANP 161
Query: 114 NLIHAQSILAIWACQVV---------------LMGFVEGYRIGGGPLGEGLDPLYPGGA- 157
I ++ + ++ LMG+ +G+ G +P YPGG
Sbjct: 162 MTIFWVNMCMMNFAEIKRGQDYWYPGSQAEQPLMGWEKGFAGSG-------NPAYPGGKY 214
Query: 158 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
F+ GL D A+++ KE+KNGRLAM + G VQA+VTG+GP +N+ DH+ADP N
Sbjct: 215 FNFAGLGKD--DMAKMQKKEIKNGRLAMMAFLGCMVQAVVTGEGPWKNICDHVADPFGAN 272
Query: 218 AWA 220
A
Sbjct: 273 MLA 275
>gi|27542569|gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length = 241
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 114/205 (55%), Gaps = 16/205 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G GDYG+D L +P+T + E++H R+AMLGA G + I +K G+ F
Sbjct: 40 PAHLDGSLAGDYGFDPLFLGQEPQTLKWYVQAELVHGRFAMLGAAGIILTSIGAKVGLGF 99
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE-GYRIGGGPLG-- 146
E W+ AG + + +D+ P L+ Q L WA F G + G LG
Sbjct: 100 PE--WYDAGKVVVEKNNIDF---PTLMVIQFYLMGWAETKRWYDFKNPGSQADGSFLGFT 154
Query: 147 ---EGLDPLYPGGAF-DPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
+GL+ YPGG F DP+GL+ D ++ E K KE+KNGRLAM + GF Q TGKG
Sbjct: 155 EEFKGLENGYPGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKG 214
Query: 202 PIENLYDHIADPVANNAWAYATNFV 226
P++NL DH+ADP N +ATN V
Sbjct: 215 PLDNLADHLADP---NHVNFATNGV 236
>gi|308813724|ref|XP_003084168.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029295|gb|AAY27546.1| chloroplast light-harvesting complex I protein precursor Lhca3
[Ostreococcus tauri]
gi|116056051|emb|CAL58584.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 272
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 117/223 (52%), Gaps = 36/223 (16%)
Query: 19 PKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLG 72
P Y+ SEQ+ SYL G PGDYG+D GLS DPE F + L E+IH RWAMLG
Sbjct: 48 PLYVLGNSEQSLSYLDGSLPGDYGFDPLGLS-DPEGAGGFVNPKWLAYSELIHGRWAMLG 106
Query: 73 ALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
G V PE+L G+ E VWFKAG I ++G DY +P I+
Sbjct: 107 VAGMVAPEVLGGMGIIPQETGLVWFKAG-MIPAQGTYDYWASP--------FTIFWINAF 157
Query: 131 LMGFVEGYRIGG----GPLGE----GL--------DPLYPGGAFDPLGLADDPDQFAELK 174
LM E R G +G+ GL DP YPGG F+ + + A +K
Sbjct: 158 LMNIAELRRAQDYWNPGSMGKQDFAGLEKMLGGSGDPAYPGGFFNFMKQGEK--DMAAMK 215
Query: 175 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KE+KNGRLAM + FG QA +TG+GP++NL DH+ DP +N
Sbjct: 216 TKEIKNGRLAMMACFGCGAQACMTGEGPVKNLVDHVIDPFGHN 258
>gi|20792|emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 278
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 116/228 (50%), Gaps = 36/228 (15%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RR + Q++ +RP + P +L G PGD+G+D GL +DPET +
Sbjct: 59 RRAAVTVSQAV--QTERPLWFP--GNTPPPWLDGSLPGDFGFDPLGLGSDPETLKWMVQA 114
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
E++H RWAMLGA G PE+ +K G+ W+ AG L+Y +
Sbjct: 115 ELVHCRWAMLGAAGIFIPELCTKLGI-LNTPSWYTAGE-------LEYFTDKT------- 159
Query: 122 LAIWACQVVLMGFVEGYR---------IGGGPL-----GEGLDPLYPGGA-FDPLGLAD- 165
++ +++ +G+ EG R + P+ G D YPGG FDPLG
Sbjct: 160 -TLFVVEMIFLGWAEGRRWADILEPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSG 218
Query: 166 DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
P++ EL+ KE+KNGRLAM ++ G + QA TG GPI+NL H+ADP
Sbjct: 219 SPEKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLLAHLADP 266
>gi|87313223|gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 19/198 (9%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
P++L + PG+YG+D L DP + + E EVIH RWAMLG G + E+L
Sbjct: 7 SDAPAWLPEDLPGNYGFDPLSLGKDPASLKRFTESEVIHGRWAMLGVAGSLAVELL---- 62
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G W+ A + G + G ++LA + V M EG R G
Sbjct: 63 ---GYGNWYDAPLWAVNGGKATWFGIDVPFDLNTLLAF---EFVAMAAAEGQR------G 110
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+ +YPGGAFDPLG A D + ELK+KE+KNGRLAM + GF Q TGKGPI L
Sbjct: 111 DAGGVVYPGGAFDPLGFAKDASKSGELKLKEVKNGRLAMVAFLGFVAQHAATGKGPIAAL 170
Query: 207 YDHIADPVANNAWAYATN 224
+H+++P N +ATN
Sbjct: 171 GEHLSNPWGAN---FATN 185
>gi|356556398|ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/244 (36%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 2 RRTVKSAPQSIW-----YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRTV A + + PDRP + P +L G PGD+G+D GL +DPE
Sbjct: 35 RRTVAYATKGVSAVCEPLPPDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLK 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ E++H+RWAML G + PE+L K G W+ AGA+ +Y +P
Sbjct: 93 WFAQAELMHARWAMLAVFGILVPELLEKIGY-IENFSWYDAGAR-------EYFVDPT-- 142
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGA-FDPL 161
++ Q+ LMG+VEG R P ++P YPGG FDP+
Sbjct: 143 ------TLFVVQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPM 196
Query: 162 GLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
P+ L+ KE+KNGRLAM + GF+ QAI TG+GPIENL H+ADP N ++
Sbjct: 197 MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFS 256
Query: 221 YATN 224
T
Sbjct: 257 AFTR 260
>gi|218191630|gb|EEC74057.1| hypothetical protein OsI_09055 [Oryza sativa Indica Group]
Length = 261
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 104/196 (53%), Gaps = 14/196 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G PGD+G+D GL +P + E++H R+AM G G + + + +G+
Sbjct: 64 PPHLDGTLPGDFGFDPLGLGEEPANLKWYVQAELVHCRFAMAGVAGILATDFIRVSGIN- 122
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV-------EGYRIGG 142
VWF+AGA F D+ L Q +L +A M F+ EG +G
Sbjct: 123 NLPVWFEAGATKF-----DFANTTALFFVQLLLMGFAETKRYMDFINPGSQAEEGTFLGI 177
Query: 143 GPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
G P YPGG F+PLGLA D + E K+KE+KNGRLAM +M GF VQA VT G
Sbjct: 178 EAALAGSQPGYPGGPLFNPLGLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVG 237
Query: 202 PIENLYDHIADPVANN 217
PI+NL H++DP N
Sbjct: 238 PIDNLLTHLSDPFNKN 253
>gi|323388125|gb|ADX60322.1| chlorophyll a-b binding protein of LHCII [Furcellaria lumbricalis]
Length = 86
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 66/79 (83%)
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
EGLDPLYPG AFDPLGLADDPD FAELK KE+KNGRLA FSMFG+FVQA+ TGKGP++N
Sbjct: 1 EGLDPLYPGEAFDPLGLADDPDTFAELKTKEIKNGRLAQFSMFGYFVQALQTGKGPVQNW 60
Query: 207 YDHIADPVANNAWAYATNF 225
+H+ADP N + YAT F
Sbjct: 61 SEHVADPWNVNGFNYATKF 79
>gi|398313941|emb|CCI55397.1| PSI antenna protein Lhca2 [Marchantia polymorpha]
Length = 267
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G PGD+G+D GL ++PE + E++H RWAMLGA G PE+L+K G+
Sbjct: 71 PEWLDGSLPGDFGFDPLGLGSEPELLKWFVQAEIVHCRWAMLGAAGIFIPELLTKIGI-L 129
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------I 140
W+ AG Q + Q+ L I +++ MG+ EG R +
Sbjct: 130 NTPSWYTAGEQTY-------------FADQTTLFI--VELLFMGWAEGRRWADILKPGSV 174
Query: 141 GGGPLG-----EGLDPLYPGGA-FDPLGL-ADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
P+ G D YPGG FDPLG A + EL+ KE+KNGRLAM ++ G +
Sbjct: 175 NTDPVFPNNKLTGTDVGYPGGFWFDPLGWGAGGAAKVKELRTKEIKNGRLAMLAVMGAWF 234
Query: 194 QAIVTGKGPIENLYDHIADP 213
QA+ TG GPI+NL+ H+ADP
Sbjct: 235 QAVYTGTGPIDNLFAHLADP 254
>gi|49388156|dbj|BAD25284.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|49388341|dbj|BAD25451.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|125538483|gb|EAY84878.1| hypothetical protein OsI_06243 [Oryza sativa Indica Group]
gi|125581168|gb|EAZ22099.1| hypothetical protein OsJ_05758 [Oryza sativa Japonica Group]
gi|215678980|dbj|BAG96410.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679371|dbj|BAG96511.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686386|dbj|BAG87647.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737482|dbj|BAG96612.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737505|dbj|BAG96635.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737512|dbj|BAG96642.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737560|dbj|BAG96690.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737570|dbj|BAG96700.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737580|dbj|BAG96710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737621|dbj|BAG96751.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737634|dbj|BAG96764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737653|dbj|BAG96783.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737729|dbj|BAG96859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737785|dbj|BAG96915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765646|dbj|BAG87343.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767462|dbj|BAG99690.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 269
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 38/229 (16%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRW 68
G DR + S+Q+ SYL G PGD+G+D GLS DPE F + R L EV + R
Sbjct: 45 GADRQLWFA--SKQSLSYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEVFNGRT 101
Query: 69 AMLGALGCVFPEILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 126
AM+G +G V PE+L K G+ E WF+ G I G Y +P ++
Sbjct: 102 AMMGVVGMVAPELLGKLGLVPAETAIPWFQTGV-IPPAGTYTYWADP--------YTLFV 152
Query: 127 CQVVLMGFVEGYRIGG----GPLGE----GLD--------PLYPGG-AFDPLGLADDPD- 168
++ L+GF E R G +G+ GL+ P YPGG F+PLG +
Sbjct: 153 FELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGTKSEA 212
Query: 169 QFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+ ELK+KE+KNGRLAM + GF VQA+ TG GP++NL DH+ADPV NN
Sbjct: 213 EMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNN 261
>gi|413954857|gb|AFW87506.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 209
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 114/208 (54%), Gaps = 35/208 (16%)
Query: 36 EFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKF 89
PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PEI K G+
Sbjct: 5 RLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEIFGKMGIIP 63
Query: 90 GEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGG 143
E WFK G I G +Y + ++ + LMGF E R+ G
Sbjct: 64 PETALPWFKTGV-IPPAGTYNYWADS--------YTLFVFNMALMGFAEHRRLQDWYNPG 114
Query: 144 PLGE----GL--------DPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
+G+ GL DP YPGG F+PLG + ELK+KE+KNGRLAM ++ G
Sbjct: 115 SMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFGKTEKEMNELKLKEIKNGRLAMLAILG 174
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNA 218
+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 175 YFIQGLVTGVGPFQNLLDHLADPVNNNV 202
>gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195726|gb|AEE33847.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 218
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 114/208 (54%), Gaps = 35/208 (16%)
Query: 36 EFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKF 89
PGDYG+D GLS DPE F + R L E+I+ R+AMLGA G + PEIL K G+
Sbjct: 14 SLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP 72
Query: 90 GEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGG 143
E WF+ G I G Y + ++ ++ LMGF E R+ G
Sbjct: 73 AETALPWFQTGV-IPPAGTYTYWADN--------YTLFVLEMALMGFAEHRRLQDWYNPG 123
Query: 144 PLGE----GLD--------PLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
+G+ GL+ P YPGG F +PLG D ELK+KE+KNGRLAM ++ G
Sbjct: 124 SMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILG 183
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNA 218
+F+Q +VTG GP +NL DH+ADPV NN
Sbjct: 184 YFIQGLVTGVGPYQNLLDHLADPVNNNV 211
>gi|356530445|ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 2 RRTVKSAPQSIW-----YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRT+ +A + + PDRP + P +L G PGD+G+D GL +DPE
Sbjct: 35 RRTIANATKGVSAVCEPLPPDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLK 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ E++HSRWAML G + PE+L + G W+ AG + +Y +P
Sbjct: 93 WFAQAELMHSRWAMLAVFGILVPELLERIGY-IENFSWYDAGTR-------EYFVDPT-- 142
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGA-FDPL 161
++ Q+ LMG+VEG R P ++P YPGG FDP+
Sbjct: 143 ------TLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPM 196
Query: 162 GLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
P+ L+ KE+KNGRLAM + GF+ QAI TG+GPIENL H+ADP N ++
Sbjct: 197 MWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFS 256
Query: 221 YATN 224
T
Sbjct: 257 AFTR 260
>gi|302851012|ref|XP_002957031.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
gi|300257587|gb|EFJ41833.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 270
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 130/252 (51%), Gaps = 43/252 (17%)
Query: 3 RTVKSAPQSIWYGPDRPK---YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FA 56
R V A + DR K Y+G S+ + +YL G PGD+G+D GL DP F
Sbjct: 26 RLVCRAEEKSIATVDRSKDQLYVGA-SQSSLAYLDGTLPGDFGFDPLGL-LDPVNSGGFV 83
Query: 57 KNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLD-YL 110
+ + L EVIH RWAMLGA GC+ PEIL G+ + VW+++G I G D Y
Sbjct: 84 EPKWLQYSEVIHGRWAMLGAAGCIAPEILGAAGLIPEKTNIVWYESGV-IPPAGSYDGYW 142
Query: 111 GNPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GPLGE----GL--------DPLYP 154
+P I+ ++V M F E R+ G +G+ GL DP YP
Sbjct: 143 ADP--------YTIFFIEIVAMQFAELRRLQDFRYPGSMGKQYFLGLEKIFAGSGDPAYP 194
Query: 155 GGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
GG F + L ELK+KE+KNGRLAM +M G+ QA +T +GP +NL DH+ADP
Sbjct: 195 GGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQATLTREGPFQNLLDHLADP 254
Query: 214 VANNAWAYATNF 225
V NN TNF
Sbjct: 255 VNNNIL---TNF 263
>gi|356519222|ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Glycine max]
Length = 263
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 32/201 (15%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G GD+G+D GL+ DP + + E++H R+AMLG G + ++L G+
Sbjct: 64 PPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAELVHCRFAMLGVFGILVTDLLRVTGIS- 122
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR---------- 139
VWF+AGA + D+ L + Q+VLMGFVE R
Sbjct: 123 KIPVWFEAGAVKY-----DFANTKTL---------FLVQLVLMGFVETKRYMDFVSPGSQ 168
Query: 140 ------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
G +GL+P YPGG +PLGLA D + + K+KE+KNGRLAM +M G F
Sbjct: 169 AKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIF 228
Query: 193 VQAIVTGKGPIENLYDHIADP 213
VQA VT GPI+NL +H+++P
Sbjct: 229 VQASVTHVGPIDNLVEHLSNP 249
>gi|302830496|ref|XP_002946814.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
gi|300267858|gb|EFJ52040.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
Length = 227
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 120/230 (52%), Gaps = 38/230 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET-----FAKNREL---EVIHSRWAMLGALGCV 77
+ + SYL G PGD+G+D GL DP + F R L E++H+RWAMLGA GC+
Sbjct: 7 TASSLSYLDGTLPGDFGFDPLGLF-DPSSGGSAGFLSQRWLHTAELMHARWAMLGAAGCL 65
Query: 78 FPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
PE L+ V K +WFK G + G DY G P + ++A Q+V+MG
Sbjct: 66 APEYLAHEKVIPKATGLLWFKTGFLPQASAGFDY-GLP-------LGVLFAVQMVMMGVA 117
Query: 136 EGYR----IGGGPLGE----GLDPL----------YPGG-AFDPLGLADDPDQFAELKVK 176
EG R I G L GL+ L YPGG F+PLGL + P E++
Sbjct: 118 EGLRGAEYIAPGSLRNNKLLGLEKLIATTRAGSAAYPGGLMFNPLGLGEKPAAMREMQQA 177
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
E+++GRLAM + G+ QA+VTG+GP +N H+ +P NN + N +
Sbjct: 178 EIRHGRLAMLACLGYAAQAVVTGRGPYDNWNRHLENPEENNVLSLLGNVL 227
>gi|2306981|gb|AAB65793.1| photosystem I antenna protein [Oryza sativa Indica Group]
Length = 265
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 37/216 (17%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE+ N + +++H RWAMLGA G
Sbjct: 57 PDRPIWFP--GSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQADLVHCRWAMLGAAG 114
Query: 76 CVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
PE L+K G+ W+ AG Q F++ ++ +++L+G+
Sbjct: 115 IFIPEFLTKIGI-LNTPSWYTAGEHQYFTD----------------TTTLFIIELILIGW 157
Query: 135 VEGYR---IGGGPLGEGLDPLYP-------------GGAFDPLGLAD-DPDQFAELKVKE 177
EG R I P DP++P G DPLG P++ EL+ KE
Sbjct: 158 AEGRRWADIIINPGCVNTDPIFPQQQVHGHRRGEPCGLWLDPLGWGTVSPEKIKELRTKE 217
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
+KNGR+AM ++ G + QA TG GPI+N + H+ADP
Sbjct: 218 IKNGRVAMLAVMGAWFQAEHTGTGPIDNFFAHVADP 253
>gi|145079153|tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca6 [Acetabularia acetabulum]
Length = 201
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 30/204 (14%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G P DYG+D L +DP+ A R+ E++H RWAM+G G + P +L+K G
Sbjct: 6 DTPPAHLDGSLPADYGFDPLSLGSDPDMLAWMRQAELMHCRWAMMGVAGILVPALLTKLG 65
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR------- 139
VWF+AG + N N + A+ + + MGFVE R
Sbjct: 66 A-MNVPVWFEAGK----------VANDN--SSVPFSALLMVEFLAMGFVETKRWYDIKSP 112
Query: 140 --IGGGPLGEGLDPL------YPGGAF-DPLGLADDPDQ-FAELKVKELKNGRLAMFSMF 189
G G + D YPGG F DP G + ++ + L+VKE+ NGRLAM +M
Sbjct: 113 GSQGDGSIFGITDDFKGKSVGYPGGTFFDPFGFSKGSEESYKTLQVKEIANGRLAMVAMV 172
Query: 190 GFFVQAIVTGKGPIENLYDHIADP 213
GF+ Q TGKGP++NL+DHIADP
Sbjct: 173 GFWAQYAATGKGPVDNLFDHIADP 196
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 158 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
FDPL L DPD A ++ EL + R AM + G V A++T G + A VAN+
Sbjct: 22 FDPLSLGSDPDMLAWMRQAELMHCRWAMMGVAGILVPALLTKLGAMNVPVWFEAGKVAND 81
>gi|87313215|gb|ABD37904.1| light-harvesting chlorophyll-a/b binding protein Lhca2
[Chlamydomonas incerta]
Length = 254
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 130/252 (51%), Gaps = 43/252 (17%)
Query: 3 RTVKSAPQSIWYGPDRPK---YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FA 56
R V A + DR K Y+G S+ + +YL G PGD+G+D GL DP F
Sbjct: 12 RLVCRAEEKSIAKVDRSKDQLYVGA-SQSSLAYLDGTLPGDFGFDPLGL-LDPVNSGGFI 69
Query: 57 KNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLD-YL 110
+ + L EVIH+RWAMLGA GC+ PE+L G+ WF++G I G D Y
Sbjct: 70 EPKWLQYSEVIHARWAMLGAAGCIAPEVLGAAGLIPDATNIKWFESGV-IPPAGSYDGYW 128
Query: 111 GNPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GPLGE----GL--------DPLYP 154
+P I+ ++V M F E R+ G +G+ GL D YP
Sbjct: 129 ADP--------YTIFFVEIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYP 180
Query: 155 GGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
GG F + L ELK+KE+KNGRLAM +M G+ QA++TGKGP +NL +H+ADP
Sbjct: 181 GGPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVLTGKGPFQNLVEHLADP 240
Query: 214 VANNAWAYATNF 225
V NN TNF
Sbjct: 241 VNNNIL---TNF 249
>gi|7271945|gb|AAF44702.1|AF241524_1 chlorophyll a/b-binding protein type I [Asarina barclaiana]
Length = 169
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 100/184 (54%), Gaps = 20/184 (10%)
Query: 39 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG 98
GD+G+D GL PE + +E E+IH RWAML G + PE L FG W KA
Sbjct: 1 GDFGFDPLGLGEVPENLERYKESELIHCRWAMLAVPGILVPEALG-----FGN--WVKAQ 53
Query: 99 AQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP---LYP 154
GG YLGNP + ++ I + + + FVE R DP YP
Sbjct: 54 EWAAVPGGQATYLGNP--VPWGTLPTILVIEFLAIAFVEHQR------SMEKDPEKRKYP 105
Query: 155 GGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHIADP 213
GGAFDPLG + DP +F ELKVKE+KNGRLA+ + GF V Q+ G GP+ENL H+ADP
Sbjct: 106 GGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADP 165
Query: 214 VANN 217
N
Sbjct: 166 WHNK 169
>gi|255074955|ref|XP_002501152.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226516415|gb|ACO62410.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 293
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 116/228 (50%), Gaps = 43/228 (18%)
Query: 21 YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGAL 74
Y+ S+Q +YL G PGD+G+D G+S DPE F + L EVIH RWAMLG
Sbjct: 70 YMMGVSDQNMAYLDGTLPGDFGFDPLGMS-DPEGAGGFVNPQWLAYSEVIHGRWAMLGVA 128
Query: 75 GCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLM 132
G V PEIL GV + VWF +GA I +G DY NP + I+ + +M
Sbjct: 129 GIVAPEILGGMGVIPESTGLVWFTSGA-IPPQGTFDYWANP--------MTIFWVNMCMM 179
Query: 133 GFVE-------------------GYRIGGGPLGEGLDPLYPGGA-FDPLGLADDPDQFAE 172
F E G+ G G G +P YPGG F+P L D A
Sbjct: 180 NFAEIKRGQDYWFPGSQAETPLLGWEKGFGGSG---NPTYPGGKWFNPFNLGKD--DMAS 234
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
++ KE+KNGRLAM + G VQA VTG+GP +N+ DH+ADP N A
Sbjct: 235 MQKKEVKNGRLAMMAFLGCMVQAAVTGEGPWKNICDHVADPFGANMLA 282
>gi|544700|gb|AAB29485.1| light-harvesting complex I, partial (chloroplast) [Hordeum vulgare]
Length = 221
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P++L G P GL+ PE F + +E E+ H RWAML G + PE L
Sbjct: 28 QPRPAHLAGSSPRGLRVRPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL---- 83
Query: 87 VKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA +G YLGNP + ++ I A + + + F E R
Sbjct: 84 ---GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEK-- 136
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP +F ELK+KE+KNGRLAM + GF V Q+ G G
Sbjct: 137 ----DPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTG 192
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 193 PLENLATHLADPWHNN 208
>gi|218202214|gb|EEC84641.1| hypothetical protein OsI_31519 [Oryza sativa Indica Group]
Length = 264
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 114/226 (50%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL +DPE + E++HSRWAML A
Sbjct: 56 GPDRPLWFP--GSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAAA 113
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PE+L K G + W AGA+ DY +P ++ Q+ LMG+
Sbjct: 114 GILVPEVLEKWGF-MEDYSWIDAGAR-------DYFADP--------WTLFVSQMALMGW 157
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
EG R P ++P YPGG + G P+ L+ KE+
Sbjct: 158 AEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 217
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GPI+NL H+ADP N ++ T+
Sbjct: 218 KNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHCNVFSAFTS 263
>gi|40714511|dbj|BAD06919.1| light-harvesting chlorophyll-a/b protein of photosystem I (Type
III) [Chlamydomonas reinhardtii]
Length = 267
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 128/251 (50%), Gaps = 41/251 (16%)
Query: 3 RTVKSAPQSIWYGPDRPK---YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FA 56
R V A + DR K Y+G S+ + +YL G PGD+G+D GL DP F
Sbjct: 25 RLVCRAEEKSIAKVDRSKDQLYVGA-SQSSLAYLDGSLPGDFGFDPLGL-LDPVNSGGFI 82
Query: 57 KNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLG 111
+ + L EVIH+RWAMLGA GC+ PE+L G+ WF++G + Y
Sbjct: 83 EPKWLQYSEVIHARWAMLGAAGCIAPEVLGAAGLIPDATNIKWFESGVIPPAGSYNGYWA 142
Query: 112 NPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GPLGE----GL--------DPLYPG 155
+P I+ ++V M F E R+ G +G+ GL D YPG
Sbjct: 143 DP--------YTIFFVEIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPG 194
Query: 156 GAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
G F + L ELK+KE+KNGRLAM +M G+ QA++TGKGP +NL +H+ADPV
Sbjct: 195 GPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVEHLADPV 254
Query: 215 ANNAWAYATNF 225
NN TNF
Sbjct: 255 NNNIL---TNF 262
>gi|308808233|ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029293|gb|AAY27545.1| chloroplast light-harvesting complex I protein precursor Lhca2
[Ostreococcus tauri]
gi|116059889|emb|CAL55596.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 242
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 114/227 (50%), Gaps = 33/227 (14%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPS-YLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R + +S S G +RP + + + P+ +L G PGD+G+D LSADPE +
Sbjct: 23 RASRRSVVVSAEAGAERPVW---YPGKAPAPHLDGSLPGDFGFDPLSLSADPEMRKWMVQ 79
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQ 119
E+ H+RWAMLG G V PE+L+K GV W AG Q ++ G L Q
Sbjct: 80 AELQHARWAMLGVAGAVAPELLTKIGVA-DLPNWVDAGTYQYWAPAG-------PLFFIQ 131
Query: 120 SILAIWACQVVLMGFVEGYRIGGGPLGEGLDPL-------------YPGGAFDPLGLADD 166
+ WA V ++ P DPL YPGG FD LG A D
Sbjct: 132 MAMFNWAE-------VRRWQDMKNPGSMNTDPLFGYNSNDTNTDVGYPGGLFDKLGYAKD 184
Query: 167 PDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
P + ELK+KE+KNGRLAM + G Q + TG+GP+ENL+ HIA P
Sbjct: 185 PAKAKELKLKEIKNGRLAMVAFLGICAQYVQTGQGPVENLFSHIASP 231
>gi|20788|emb|CAA41404.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 246
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P +L G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 53 QPRPPHLDGSAPGDFGFDPLRLGVIPENLERYKESELIHCRWAMLAVPGMLIPEAL---- 108
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A G Y G P + + + A + + + FVE R G P
Sbjct: 109 ---GLGNWVEAQKWAAIPGSQATYFGVP--VPWGYLPIVLAVEFLAIAFVESQR-NGEPD 162
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPIE 204
E YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF VQA G GP+E
Sbjct: 163 PEKRK--YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLE 220
Query: 205 NLYDHIADPVANN 217
NL H++DP N
Sbjct: 221 NLATHLSDPWHRN 233
>gi|159486759|ref|XP_001701405.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
gi|158271707|gb|EDO97521.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
Length = 298
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 128/251 (50%), Gaps = 41/251 (16%)
Query: 3 RTVKSAPQSIWYGPDRPK---YLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FA 56
R V A + DR K Y+G S+ + +YL G PGD+G+D GL DP F
Sbjct: 25 RLVCRAEEKSIAKVDRSKDQLYVGA-SQSSLAYLDGSLPGDFGFDPLGL-LDPVNSGGFI 82
Query: 57 KNREL---EVIHSRWAMLGALGCVFPEILSKNGV--KFGEAVWFKAGAQIFSEGGLDYLG 111
+ + L EVIH+RWAMLGA GC+ PE+L G+ WF++G + Y
Sbjct: 83 EPKWLQYSEVIHARWAMLGAAGCIAPEVLGAAGLIPDATNIKWFESGVIPPAGSYNGYWA 142
Query: 112 NPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GPLGE----GL--------DPLYPG 155
+P I+ ++V M F E R+ G +G+ GL D YPG
Sbjct: 143 DP--------YTIFFVEIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPG 194
Query: 156 GAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPV 214
G F + L ELK+KE+KNGRLAM +M G+ QA++TGKGP +NL +H+ADPV
Sbjct: 195 GPFFNLFNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVEHLADPV 254
Query: 215 ANNAWAYATNF 225
NN TNF
Sbjct: 255 NNN---ILTNF 262
>gi|62199619|gb|AAX76906.1| chloroplast Tidi [Dunaliella salina]
Length = 350
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 116/237 (48%), Gaps = 48/237 (20%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL--------EVIHSRWAMLGALGCVF 78
E+ SYLTG PGD+GWD L+ + N + EVIH RWAMLGA G +
Sbjct: 123 ERALSYLTGSLPGDFGWDPLHLADTNDQDRLNNAMSMEWLSYAEVIHGRWAMLGAAGALS 182
Query: 79 PEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAI----WACQ---- 128
PE+L K GV E WF+AG GLD + NLI I W Q
Sbjct: 183 PEVLGKAGVIPKETGLTWFQAG-------GLD--SSSNLIAVPFTGPIPFQYWTDQYTLL 233
Query: 129 ---VVLMGFVEG-----YRIGGGPLGE---GLD--------PLYPGGAF-DPLGL-ADDP 167
+V MGF E Y+ G + GL+ P YPGG F + GL A D
Sbjct: 234 FTMLVAMGFAETRRWQEYKEPGSVQKQFFLGLEKLTPPSQQPAYPGGGFFNFAGLGAKDE 293
Query: 168 DQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
Q ELKVKE++NGRLAM + GF VQA VT GP +NL DHI P A N + TN
Sbjct: 294 KQMFELKVKEIRNGRLAMLAFLGFMVQAEVTHVGPFQNLLDHINSPGAQNLLSRLTN 350
>gi|302806497|ref|XP_002984998.1| light-harvesting complex [Selaginella moellendorffii]
gi|300147208|gb|EFJ13873.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G P D+G+D GL ++PE + E++HSRWAMLGA G PE L+K G+
Sbjct: 73 PAWLDGSLPADFGFDPLGLGSEPELLKWFVQSEIVHSRWAMLGAAGIFIPEALTKLGI-L 131
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG--GPLGE 147
W+ AG Q +Y + Q+ L I +++L+G+ EG R P
Sbjct: 132 NTPFWYTAGEQ-------EYFTD------QTTLFI--VEMILLGWAEGRRWADILKPGSV 176
Query: 148 GLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFV 193
DP+ YPGG FDP G P++ EL+ KE+KNGRLAM ++ G +
Sbjct: 177 NTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASPEKLKELRTKEIKNGRLAMLAVMGAWF 236
Query: 194 QAIVTGKGPIENLYDHIADP 213
QA+ TG PI+NL H+ADP
Sbjct: 237 QAVYTGARPIDNLLAHLADP 256
>gi|20790|emb|CAA41405.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 207
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 101/193 (52%), Gaps = 14/193 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P +L G PGD+G+D L PE + +E E+IH RWAML G + PE L
Sbjct: 14 QPRPPHLDGSAPGDFGFDPLRLGVIPENLERYKESELIHCRWAMLAVPGMLIPEAL---- 69
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W +A G Y G P + + + A + + + FVE R G P
Sbjct: 70 ---GLGNWVEAQKWAAIPGSQATYFGVP--VPWGYLPIVLAVEFLAIAFVESQR-NGEPD 123
Query: 146 GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT-GKGPIE 204
E YPGGAFDPLG + DP +F E KVKE+KNGRLA+ + GF VQA G GP+E
Sbjct: 124 PEKRK--YPGGAFDPLGFSKDPVKFKEYKVKEIKNGRLALLAFVGFCVQASANPGTGPLE 181
Query: 205 NLYDHIADPVANN 217
NL H++DP N
Sbjct: 182 NLATHLSDPWHRN 194
>gi|303324978|pdb|3LW5|1 Chain 1, Improved Model Of Plant Photosystem I
Length = 170
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 98/181 (54%), Gaps = 20/181 (11%)
Query: 38 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKA 97
PGD+G+D GL P + +E E+IH RWAML G + PE L G W KA
Sbjct: 3 PGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEAL-------GYGNWVKA 55
Query: 98 GAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDP---LY 153
GG YLGNP + ++ I A + + + FVE R DP Y
Sbjct: 56 QEWAALPGGQATYLGNP--VPWGTLPTILAIEFLAIAFVEHQR------SMEKDPEKKKY 107
Query: 154 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHIAD 212
PGGAFDPLG + DP + ELKVKE+KNGRLA+ + GF V Q+ G GP+ENL H+AD
Sbjct: 108 PGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLAD 167
Query: 213 P 213
P
Sbjct: 168 P 168
>gi|168060917|ref|XP_001782439.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666110|gb|EDQ52774.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
DRP + + P +L G PGD+G+D GL +DPE + E++H RWAMLGA G
Sbjct: 1 DRPLWFP--GSKAPEWLDGSLPGDFGFDPLGLGSDPELLKWFVQAELVHCRWAMLGAAGI 58
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP-NLIHAQSILAIWA-----CQVV 130
PE L+K G+ W AG Q Y +P L + IL WA +V
Sbjct: 59 FIPEALTKAGI-LNTPSWNVAGDQ-------QYFADPTTLFVIELILFAWAEGRRWADIV 110
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGL--ADDPDQFAELKVKELKNGRLAMFS 187
G V + G D YPGG FDPLG D + EL+ KE+KNGRLAM +
Sbjct: 111 NPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTKDAKKLKELRTKEIKNGRLAMLA 170
Query: 188 MFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYAT 223
+ G VQA T GPI+NL H+ADP N +A +
Sbjct: 171 VLGAVVQANYTHTGPIDNLLAHLADPGHNTIFALSN 206
>gi|145079846|tpg|DAA05942.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Micromonas sp. CCMP490]
Length = 250
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 108/215 (50%), Gaps = 36/215 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G PGDYG+D GL D ++ E+ H+RWAMLG G PE++ V+
Sbjct: 52 PKHLDGTMPGDYGFDPLGLGEDKVALEWYKQAELQHARWAMLGVTGMAAPELIQNPFVEG 111
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR----IGGGPL 145
W +A +G Y+ +PN ++ Q+ +M + E R G +
Sbjct: 112 AMPNWAEAP---LWDG---YMASPN--------TLFVVQMFMMNWAEVRRWQDMKNPGTM 157
Query: 146 GEGLDPL-------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
E DPL YP G FDP+G+A DP++ LKVKE+ NGRLAM ++ G
Sbjct: 158 NE--DPLTGANKGDTNTDVGYPKGLFDPMGMAKDPEKVKVLKVKEIANGRLAMVAVMGCI 215
Query: 193 VQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+Q TG GPI NL H+ADP N + TNFVP
Sbjct: 216 IQNEATGVGPIANLKAHLADPAHNTIF---TNFVP 247
>gi|302808989|ref|XP_002986188.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146047|gb|EFJ12719.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 107/200 (53%), Gaps = 32/200 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++L G P D+G+D GL ++PE + E++HSRWAMLGA G PE L+K G+
Sbjct: 73 PAWLDGSLPADFGFDPLGLGSEPELLKWFVQSEIVHSRWAMLGAAGIFIPEALTKLGI-L 131
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG--GPLGE 147
W+ AG Q +Y + Q+ L I +++L+G+ EG R P
Sbjct: 132 NTPFWYTAGEQ-------EYFTD------QTTLFI--VEMILLGWAEGRRWADILKPGSV 176
Query: 148 GLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELKNGRLAMFSMFGFFV 193
DP+ YPGG FDP G P++ EL+ KE+KNGRLAM ++ G +
Sbjct: 177 NTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASPEKLKELRTKEIKNGRLAMLAVMGAWF 236
Query: 194 QAIVTGKGPIENLYDHIADP 213
QA+ TG PI+NL H+ADP
Sbjct: 237 QAVYTGARPIDNLLAHLADP 256
>gi|87313175|gb|ABD37884.1| light-harvesting chlorophyll-a/b binding protein Lhca5.2
[Mesostigma viride]
gi|145079736|tpg|DAA05927.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca9 [Mesostigma viride]
Length = 225
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 113/219 (51%), Gaps = 45/219 (20%)
Query: 4 TVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 63
TV++A +++W P P++L G PGDYG+D GL+ DP+ A E E
Sbjct: 33 TVRAADRTLWLPNTVP----------PAHLNGTLPGDYGYDPIGLATDPDRLAWFVEAER 82
Query: 64 IHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILA 123
+ RWAM G G +F + L G A WF GA++ +S +
Sbjct: 83 TNGRWAMAGVAGILFTDAL-----HIGSAPWFSIGAEL-----------------ESPIP 120
Query: 124 IW---ACQVVLMGFVEGYRIGG-GPLGE-GLDPLYPGGAFDPLGLADDPDQFAELKVKEL 178
+W + V+ GF+E R+ G G+ GL +P FDPLG+ E+ VKE+
Sbjct: 121 LWGLATIEFVIFGFLEMKRLEGWKKTGQNGLLNWFP---FDPLGMNSK-----EMMVKEV 172
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
KNGRLAMF+ GF VQA+VT +GP+ NL HIADP NN
Sbjct: 173 KNGRLAMFAWCGFMVQALVTREGPVTNLEKHIADPFNNN 211
>gi|117663141|gb|ABK55743.1| chloroplast type III LHCII CAB precursor protein [Cucumis sativus]
Length = 84
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
Query: 131 LMGFVEGYRIGG-GPLGEGLDPLYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSM 188
LM VEG+RI G +GEG D LYPGG FDPLGLADDP FAELKVKE+KNGRLAMFSM
Sbjct: 1 LMVLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSM 59
Query: 189 FGFFVQAIVTGKGPIENLYDHIADP 213
FGFFVQAIVTGKGP+ENL DH+ DP
Sbjct: 60 FGFFVQAIVTGKGPLENLLDHLDDP 84
>gi|145078891|tpg|DAA05888.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Euglena gracilis]
Length = 1081
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 112/220 (50%), Gaps = 44/220 (20%)
Query: 2 RRTVKSAPQS---IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKN 58
R T SAP+ +W+ P P +LTGEFPGD G+D GLS DP F +
Sbjct: 146 RSTRGSAPEEERLVWFPNATP----------PDHLTGEFPGDRGFDPLGLSKDPVVFERM 195
Query: 59 RELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHA 118
R EV H R AMLG +GC+ PE+ F + WF L + NL
Sbjct: 196 RISEVFHGRLAMLGIVGCIVPELF------FSQGPWFD-------------LSSFNLTR- 235
Query: 119 QSILAIWACQVVL-MGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKE 177
L + A QV+ + + G R +G D YPG FDPL L D+ E K+KE
Sbjct: 236 ---LGLVALQVIAPLEYWRGNRGFSWNGDDGPDQSYPG--FDPLRLTDE-----ETKLKE 285
Query: 178 LKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
+KNGRLAM +M G VQ+ +TGK P+ NL +H+++P + N
Sbjct: 286 IKNGRLAMTAMLGLEVQSHITGKSPLVNLSEHLSNPASVN 325
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 35/191 (18%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YLTGE GD G+D AGL+ADP TF + + EV H R +ML +GC+ PE+L
Sbjct: 728 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------- 780
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL---G 146
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 781 GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDE 822
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E +D YPG FDPL L + K E+KNGRLAM MFG VQ+ VTGK PI NL
Sbjct: 823 ETIDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITNL 875
Query: 207 YDHIADPVANN 217
DH++ P+ N
Sbjct: 876 IDHLSHPLTAN 886
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 47/218 (21%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R++ KS + +W+ P L P S+LTGE+ GD G+D AGL+ADP+TF + R
Sbjct: 341 RKSQKSDERPLWF----PNTLAP------SWLTGEYYGDRGFDPAGLAADPDTFERMRIA 390
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EV H R AML +G + P+ L G+ +W++A N
Sbjct: 391 EVYHGRLAMLAIVGALVPDYL-------GKGIWYEAAQ--------------NAGIGLKE 429
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDP--LYPGGAFDPLGLADDPDQFAELKVKELK 179
+AI+ + G + E DP +YPG FDPL L D K E+K
Sbjct: 430 VAIFTAAYGVFEVARGVK-------ENSDPTTIYPG--FDPLNLTTD-----YTKEAEIK 475
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLA+ ++ GF VQ V G P+ NL DH+ P+ +N
Sbjct: 476 NGRLALTALLGFEVQRHVVGGSPLANLADHLQQPLQHN 513
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 39/201 (19%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 542 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 596
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 597 --GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQ 636
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
G+ LD YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P+
Sbjct: 637 KGD-LDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLA 688
Query: 205 NLYDHIADPVANNAWAYATNF 225
NL H+A+P+ N ATN
Sbjct: 689 NLSAHLANPIGAN---IATNL 706
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 36/193 (18%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 916 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 970
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 971 --GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQ 1010
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
G+ LD YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P+
Sbjct: 1011 KGD-LDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLA 1062
Query: 205 NLYDHIADPVANN 217
NL H+A+P+ N
Sbjct: 1063 NLTAHLANPLGAN 1075
>gi|145078859|tpg|DAA05887.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca2 [Euglena gracilis]
Length = 1036
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 101/189 (53%), Gaps = 31/189 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +LTGEFPGD G+D GLS DP F + R EV H R AMLG +GC+ PE+ F
Sbjct: 167 PDHLTGEFPGDRGFDPLGLSTDPVVFERMRISEVFHGRLAMLGIVGCIVPELF------F 220
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVL-MGFVEGYRIGGGPLGEG 148
+ WF L NL L + A QV+ + + G R +G
Sbjct: 221 SQGPWFD-------------LSGFNLTR----LGLVALQVIAPLEYWRGNRGFSWNGDDG 263
Query: 149 LDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYD 208
D YPG FDPL L DD E K+KE+KNGRLAM +M G VQ+ +TGK P+ NL +
Sbjct: 264 PDQSYPG--FDPLRLTDD-----ETKLKEIKNGRLAMTAMLGLEVQSHITGKSPLVNLSE 316
Query: 209 HIADPVANN 217
H+++P + N
Sbjct: 317 HLSNPASVN 325
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 35/191 (18%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YLTGE GD G+D AGL+ADP TF + + EV H R +ML +GC+ PE+L
Sbjct: 728 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------- 780
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL---G 146
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 781 GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDE 822
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E +D YPG FDPL L + K E+KNGRLAM MFG VQ+ VTGK PI NL
Sbjct: 823 ETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITNL 875
Query: 207 YDHIADPVANN 217
DH++ P+ N
Sbjct: 876 IDHLSHPLTAN 886
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 98/193 (50%), Gaps = 36/193 (18%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 542 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 596
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 597 --GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQ 636
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
GE LD YPG FDPL L D + E+KNGRLA+ ++ G Q + TG+ P+
Sbjct: 637 KGE-LDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLA 688
Query: 205 NLYDHIADPVANN 217
NL H+A+P+ N
Sbjct: 689 NLSAHLANPIGAN 701
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 47/218 (21%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R++ KS + +W+ P L P S+L GE+ GD G+D AGL+ADP+TF + R
Sbjct: 341 RKSQKSDERPLWF----PNTLAP------SWLNGEYYGDRGFDPAGLAADPDTFERMRIA 390
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
EV H R AML +G + P+ L G+ +W++A N
Sbjct: 391 EVYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQ--------------NAGIGLKE 429
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDP--LYPGGAFDPLGLADDPDQFAELKVKELK 179
+AI+ + G + E DP +YPG FDPL L D K E+K
Sbjct: 430 VAIFTAAYGVFEVARGVK-------ENSDPTTIYPG--FDPLNLTTD-----YTKEAEIK 475
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLA+ ++ GF VQ V G P+ NL +H+ P+ N
Sbjct: 476 NGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPLQRN 513
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 31/149 (20%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 916 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 970
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 971 --GKGAWFEAGDSVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQ 1010
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAEL 173
GE LD YPG FDPL L D + AE+
Sbjct: 1011 KGE-LDRSYPG--FDPLNLTTDYTRAAEV 1036
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 158 FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
FDPL LA DPD +A ++V E+ +GRLAM M G V ++ GKG
Sbjct: 931 FDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL-GKG 973
>gi|225580691|gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 11 SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 70
SI R P SE P + PG++ +D L + T + RE E+IH RWAM
Sbjct: 26 SIRVQAQRAGNFAPGSE--PKEYLNDLPGNFNFDPLELGKEKGTLQRYREAELIHCRWAM 83
Query: 71 LGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVV 130
LGA GC+ E+L G W+ A + + G +IL + +VV
Sbjct: 84 LGAAGCLAVEVL-------GLGNWYDAPLWAVTGDKPTWFGIEVPFDIATILGV---EVV 133
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
M EG R + + LYPGGAFDPLG + DP F + K+KELKNGRLAM + G
Sbjct: 134 AMAVAEGLRNDNQDMEK---RLYPGGAFDPLGFSKDPKSFEDKKLKELKNGRLAMVACLG 190
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATN--FVPG 228
F Q TGK +E L DH++ P NN +ATN VPG
Sbjct: 191 FAGQHAATGKPILEALGDHLSSPFFNN---FATNGVSVPG 227
>gi|384253051|gb|EIE26526.1| hypothetical protein COCSUDRAFT_52367 [Coccomyxa subellipsoidea
C-169]
Length = 246
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ PSYL GE PGD+G+D L DP ++ E+ + RWAML A G +F ++L G
Sbjct: 45 SEIPSYLKGELPGDFGFDPLRLGEDPAALKWYQQAELQNGRWAMLAAAGILFVDLLGHLG 104
Query: 87 VKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP 144
A WFKA + + L + +L W V+ P
Sbjct: 105 AGGPAAATPWFKASDFTY------FAPTSTLFIVELLLFAWVEVRRYQDMVKPGSTNQDP 158
Query: 145 ------LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT 198
L G +P YPGG FDPLG + AELK+KE+KN RLAM ++ GFFVQA T
Sbjct: 159 IFSQYSLPSGNEPGYPGGIFDPLGYSKG--NMAELKLKEIKNARLAMLAVLGFFVQAKTT 216
Query: 199 GKGPIENLYDHIADPVANNAW 219
GK P+++L H+ADP +NN +
Sbjct: 217 GKTPLDSLSSHLADPWSNNVF 237
>gi|326514018|dbj|BAJ92159.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 120/218 (55%), Gaps = 36/218 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ +YL G PGD+G+D GLS DPE F + R L E+ + R AM+G +G + P
Sbjct: 54 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 112
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
E L K G+ E WF+AGA I G Y +P ++ ++ L+GF E
Sbjct: 113 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 163
Query: 138 YRI----GGGPLGE----GL--------DPLYPGG-AFDPLGLADDPD-QFAELKVKELK 179
R+ G +G+ GL DP YPGG F+PLG + + ELK+KE+K
Sbjct: 164 RRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIK 223
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + G +QAI TG GP +NL DH++DPV NN
Sbjct: 224 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 261
>gi|115479363|ref|NP_001063275.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|51091350|dbj|BAD36085.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|51091400|dbj|BAD36143.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|113631508|dbj|BAF25189.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|215695401|dbj|BAG90592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL +DPE + E++HSRWAML
Sbjct: 56 GPDRPLWFP--GSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVA 113
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PE+L K G + W AGA+ DY +P ++ Q+ LMG+
Sbjct: 114 GILVPEVLEKWGF-MEDYSWIDAGAR-------DYFADP--------WTLFVSQMALMGW 157
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
EG R P ++P YPGG + G P+ L+ KE+
Sbjct: 158 AEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 217
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GPI+NL H+ADP N ++ T+
Sbjct: 218 KNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHCNVFSAFTS 263
>gi|187609486|gb|ACD13266.1| chlorophyll a/b binding protein precursor [Phyllostachys
iridescens]
Length = 205
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+ P +L G PGD+G+D GL+ PE + +E EV H RWAML G + PE L
Sbjct: 23 QPRPVHLDGSSPGDFGFDPLGLATVPENSERFKESEVYHCRWAMLCVPGVLVPEAL---- 78
Query: 87 VKFGEAVWFKAGAQIFSEGG-LDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
G W KA GG Y G P + ++ I A + + + F E R
Sbjct: 79 ---GLGNWVKAQEWAAVPGGQATYFGVP--VPWGNLPTILAIEFLAIAFAEHQRTMEK-- 131
Query: 146 GEGLDP---LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKG 201
DP YPGGAFDPLG + DP + E K+KE++NGRLAM + GF V Q+ G G
Sbjct: 132 ----DPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIRNGRLAMLAFVGFCVQQSPYPGTG 187
Query: 202 PIENLYDHIADPVANN 217
P+ENL H+ADP NN
Sbjct: 188 PLENLASHLADPWHNN 203
>gi|145350546|ref|XP_001419664.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144579896|gb|ABO97957.1| chlorophyll a/b binding, possibly photosystem I light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 235
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 9 PQSIWYGPDRPKYLGPFSEQTPS-YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 67
P ++ DRP + + + P+ +L G PGDYG+D LSADPE + E+ H+R
Sbjct: 27 PVAVSANADRPVW---YPGKAPAAHLDGSLPGDYGFDPLSLSADPEMRQWMVQAELQHAR 83
Query: 68 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWA 126
WAMLG GCV PE+L+K GV W A Q ++ GG L Q + WA
Sbjct: 84 WAMLGVAGCVAPELLTKIGVA-DLPNWVDAATYQYWAPGG-------TLFFIQMAMFNWA 135
Query: 127 CQVVLMGFVEGYRIGGGPL------GEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKN 180
+ PL D YP G FD G A D AELK+KE+KN
Sbjct: 136 EIRRWQDMKNPGSVNTDPLFGYNSNDTNTDVGYPKGLFDKFGWAKDEKTTAELKLKEIKN 195
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
GRLAM + G Q + TG GP+ENL+ H+ +P
Sbjct: 196 GRLAMLAFLGICAQYVQTGVGPVENLFSHMGNP 228
>gi|255646839|gb|ACU23891.1| unknown [Glycine max]
Length = 260
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 120/244 (49%), Gaps = 39/244 (15%)
Query: 2 RRTVKSAPQSIW-----YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFA 56
RRT+ +A + + PDRP + P +L G PGD+G+D GL +DPE
Sbjct: 35 RRTIANATKGVSAVCEPLPPDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLK 92
Query: 57 KNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
+ E++HSRWAML G + PE+L + G W+ AG + +Y +P
Sbjct: 93 WFAQAELMHSRWAMLAVFGILVPELLERIGY-IENFSWYDAGTR-------EYFVDPT-- 142
Query: 117 HAQSILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGA-FDPL 161
++ Q+ LMG+VEG R P ++P YPGG FDP+
Sbjct: 143 ------TLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPM 196
Query: 162 GLAD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWA 220
P+ L+ KE+KNG LAM + GF+ QAI TG+GPIENL H+ADP N ++
Sbjct: 197 MWGRGSPEPVMVLRTKEIKNGGLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFS 256
Query: 221 YATN 224
T
Sbjct: 257 AFTR 260
>gi|307103837|gb|EFN52094.1| hypothetical protein CHLNCDRAFT_32710 [Chlorella variabilis]
Length = 264
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 105/203 (51%), Gaps = 30/203 (14%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+P YL G GDYG+D GL A+PE R+ E+ ++RWAMLG G + EI++
Sbjct: 45 SPKYLDGNLAGDYGFDPMGLGANPERLTWYRQAELQNARWAMLGVAGILGQEIINP---- 100
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR--------- 139
E W+ AG E + GN ++ I A + +LM FVE R
Sbjct: 101 --EQWWYSAG---MPENLPSFDGN-----KVNMGGILAWEFLLMHFVEVRRWQDIRKKDS 150
Query: 140 IGGGPLGEGL-----DPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
+ P L + YPGG FDPLG + F E++ KE+KNGRLAM + F +Q
Sbjct: 151 VNADPFNPNLKVPNPEMGYPGGPFDPLGFSKG--NFKEVQTKEIKNGRLAMVAFVAFTIQ 208
Query: 195 AIVTGKGPIENLYDHIADPVANN 217
A TGKGP+ NL DH+A P +NN
Sbjct: 209 AQATGKGPLANLTDHLASPFSNN 231
>gi|116793607|gb|ABK26807.1| unknown [Picea sitchensis]
Length = 125
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/65 (87%), Positives = 60/65 (92%), Gaps = 2/65 (3%)
Query: 167 PDQ--FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
PD+ + ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV NNAWAYATN
Sbjct: 61 PDRVLYLELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATN 120
Query: 225 FVPGK 229
FVPGK
Sbjct: 121 FVPGK 125
>gi|356510907|ref|XP_003524175.1| PREDICTED: uncharacterized protein LOC100789010 [Glycine max]
Length = 320
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
Query: 113 PNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAE 172
PNL +SILA+ A ++VL+G E YRI G E D L+PGG FDPLGLA DPDQ A
Sbjct: 207 PNL---ESILAVVA-EIVLVGGAEYYRIINGLDLE--DKLHPGGPFDPLGLAKDPDQAAL 260
Query: 173 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL H++DP NN
Sbjct: 261 LKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN 305
>gi|168052237|ref|XP_001778557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670011|gb|EDQ56587.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 273
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 110/223 (49%), Gaps = 35/223 (15%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
DRP + Q P +L G PGD+G+D GL +DPE + E++H RWAMLGA G
Sbjct: 64 DRPLWFP--GSQPPEWLDGSLPGDFGFDPLGLGSDPELLKWFVQAELVHCRWAMLGAAGI 121
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE 136
PE L+K G+ W AG Q + A ++ I +++L + E
Sbjct: 122 FIPEALTKAGI-LNTPSWTVAGDQQY------------FTDATTLFVI---EIILFAWAE 165
Query: 137 GYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD--DPDQFAELKVKELK 179
G R P +DP+ YPGG FDPLG D + +L+ +E+K
Sbjct: 166 GRRWADIINPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTGDAAKLKDLRTREIK 225
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
NGRLAM ++ G VQA T GPI+NL H+ADP N +A +
Sbjct: 226 NGRLAMLAVLGAVVQANYTHTGPIDNLLAHLADPGHNTIFALS 268
>gi|326510901|dbj|BAJ91798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 120/218 (55%), Gaps = 36/218 (16%)
Query: 26 SEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFP 79
S+Q+ +YL G PGD+G++ GLS DPE F + R L E+ + R AM+G +G + P
Sbjct: 54 SKQSLTYLDGTLPGDFGFNPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAP 112
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEG 137
E L K G+ E WF+AGA I G Y +P ++ ++ L+GF E
Sbjct: 113 EALGKVGLVPPETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEH 163
Query: 138 YRI----GGGPLGE----GL--------DPLYPGG-AFDPLGLADDPD-QFAELKVKELK 179
R+ G +G+ GL DP YPGG F+PLG + + ELK+KE+K
Sbjct: 164 RRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIK 223
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + G +QAI TG GP +NL DH++DPV NN
Sbjct: 224 NGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 261
>gi|357153802|ref|XP_003576571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL ++PET + E++HSRWAML
Sbjct: 64 GPDRPVWFP--GTSPPPWLDGSLPGDFGFDPLGLGSEPETLRWFAQAELMHSRWAMLAVA 121
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PEIL K G E W+ AG + +Y +P ++ Q+ LMG+
Sbjct: 122 GILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFIAQMALMGW 165
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
EG R P ++P YPGG + G P+ L+ KE+
Sbjct: 166 AEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 225
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GP++NL H+ADP N ++ T+
Sbjct: 226 KNGRLAMLAFVGFWFQAVYTGQGPVDNLLAHLADPGHCNIFSAFTS 271
>gi|449466336|ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
gi|449522610|ref|XP_004168319.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
Length = 259
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 34/202 (16%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P +L G GD+G+D GL DP++ + E++H R+AMLG G + ++L G+
Sbjct: 60 PPHLDGTLAGDFGFDPLGLGEDPQSLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGIS- 118
Query: 90 GEAVWFKAGAQIFSEGGLDY-LGNPNLIHAQSILAIWACQVVLMGFVEGYR--------- 139
VW+ AGA ++Y N ++ Q++LMGFVE R
Sbjct: 119 ELPVWYNAGA-------VEYGFANKR--------TLFIVQLLLMGFVETKRYMDFKSPGS 163
Query: 140 -------IGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
G +GL+P YPGG +PLG+A D + K+KE+KNGRLAM +M G
Sbjct: 164 QAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGI 223
Query: 192 FVQAIVTGKGPIENLYDHIADP 213
FVQA VT GPI+NL +H+++P
Sbjct: 224 FVQAYVTHTGPIDNLVEHLSNP 245
>gi|308801082|ref|XP_003075322.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
gi|63029299|gb|AAY27548.1| chloroplast light-harvesting complex I protein precursor Lhca1
[Ostreococcus tauri]
gi|116061876|emb|CAL52594.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
Length = 225
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 28/214 (13%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R T +++ + +W+ P +E P++L G+ P DYG+D L P+ A+ RE
Sbjct: 23 RVTARASARPMWF---------PGAE-APAHLRGDLPCDYGFDPLNLGEKPDNLARYREA 72
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
E++H+RWAM+G G V EI G+ W A + + YLGN HA +
Sbjct: 73 ELMHARWAMMGVAGAVGVEIA-------GQGDWASAQPTTW-DATAKYLGNET--HA-PL 121
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNG 181
A+ VL+ F E R G LYPGG+FDP GL+ D F LK KEL NG
Sbjct: 122 FAVIGVNGVLVAFAESQRQA----ATGEARLYPGGSFDPAGLSKGKD-FETLKRKELANG 176
Query: 182 RLAMFSMFGFFV--QAIVTGKGPIENLYDHIADP 213
R+AM + FG QA +G GP++ L +H+ADP
Sbjct: 177 RVAMMAFFGIMAQHQADPSGPGPVKQLANHLADP 210
>gi|449500520|ref|XP_004161120.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPET + E++H+RWAML G
Sbjct: 58 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAG 115
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE G+ W+ AG++ +Y +P + Q+ LMG+V
Sbjct: 116 ILLPEWFESLGL-IQNFSWYDAGSR-------EYFADPT--------TLLVAQLALMGWV 159
Query: 136 EGYR----IGGGPLGEGL----------DPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R + G + L D YPGG FDP+ P+ L+ KE+K
Sbjct: 160 EGRRWADLVNPGSVDVDLKLPHKKKAMADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIK 219
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + G + QAI TG+GP+ENL H+ADP N
Sbjct: 220 NGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN 257
>gi|449452592|ref|XP_004144043.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 109/218 (50%), Gaps = 34/218 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPET + E++H+RWAML G
Sbjct: 58 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAG 115
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE G+ W+ AG++ +Y +P + Q+ LMG+V
Sbjct: 116 ILLPEWFESLGL-IQNFSWYDAGSR-------EYFADPT--------TLLVAQLALMGWV 159
Query: 136 EGYR----IGGGPLGEGL----------DPLYPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R + G + L D YPGG FDP+ P+ L+ KE+K
Sbjct: 160 EGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIK 219
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM + G + QAI TG+GP+ENL H+ADP N
Sbjct: 220 NGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCN 257
>gi|388513951|gb|AFK45037.1| unknown [Medicago truncatula]
Length = 267
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 107/214 (50%), Gaps = 34/214 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DPE + E++H+RWAMLG G
Sbjct: 60 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWLAQAELMHARWAMLGVSG 117
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PEIL K G W+ AG+ ++Y +P ++ Q+ LMG+V
Sbjct: 118 ILIPEILEKIGY-VKNFSWYNAGS-------VEYFADPT--------TLFIVQLALMGWV 161
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P ++P YPGG FDP+ P+ L+ KE+K
Sbjct: 162 EGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIK 221
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
NGRLAM + GF QA+ G PI+NL H+ADP
Sbjct: 222 NGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADP 255
>gi|311994|emb|CAA50763.1| light harvesting complex I chlorophyll binding protein [Pyrobotrys
stellata]
Length = 260
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 122/246 (49%), Gaps = 36/246 (14%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
R V A Q + P P P YL GE GDYG+D G +P +
Sbjct: 21 RSVVARAEQRASWFPGNP---------APEYLKGELAGDYGFDPLGFGDEPRRLEWMVQA 71
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVK-----FGEAVWFKAGAQIFSEGGLDYLGNPNLI 116
E++H RWAMLGA G + PEI +K G++ W++AG ++ +E G +G +L
Sbjct: 72 ELVHCRWAMLGAAGILLPEIGNKTGMQSAAPGLAFPHWWEAG-KVVAESGPWSMG--SLT 128
Query: 117 HAQSILAIWACQVVLMGFVE-GYRIGG---GPLGEGL-----DPL------YPGGAFDPL 161
+L WA L FV+ G + G PLG G +PL YPGG FDP
Sbjct: 129 FTMFLLMGWAEHKRLYDFVKPGSQAVGWAWAPLGLGSITGVEEPLVAKENGYPGGIFDPF 188
Query: 162 GLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV-TGKGPIENLYDHIADPVANNAWA 220
++ + ++ K E+ NGRLAM +MFGF Q I GKGPI+NL DH+++P
Sbjct: 189 QMSKNEAKYKWYKQSEVTNGRLAMTAMFGFVSQHIAYPGKGPIDNLVDHVSNPTKVT--- 245
Query: 221 YATNFV 226
+ATN V
Sbjct: 246 FATNGV 251
>gi|225457389|ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|147843386|emb|CAN79984.1| hypothetical protein VITISV_038035 [Vitis vinifera]
Length = 252
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 102/205 (49%), Gaps = 36/205 (17%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+PSYL G PGD G+D GL+ DPE + E+++SRWAMLG G + PE+ +K G+
Sbjct: 61 SSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGI 120
Query: 88 KFGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG--GP 144
W+ AG A+ F+ ++ + +L +VE R P
Sbjct: 121 -INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNP 163
Query: 145 LGEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
DP+ YPGG F+PL A P + E K KEL NGRLAM + GF
Sbjct: 164 GSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFA--PTE--EAKEKELANGRLAMLAFLGFI 219
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
VQ VTGKGP +NL HI+DP N
Sbjct: 220 VQHNVTGKGPFDNLLQHISDPWHNT 244
>gi|297733963|emb|CBI15210.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 100/205 (48%), Gaps = 36/205 (17%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+PSYL G PGD G+D GL+ DPE + E+++SRWAMLG G + PE+ +K G+
Sbjct: 58 SSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIGI 117
Query: 88 KFGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGP 144
W+ AG A+ F+ ++ + +L +VE R P
Sbjct: 118 -INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNP 160
Query: 145 LGEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
DP+ YPGG F+PL A E K KEL NGRLAM + GF
Sbjct: 161 GSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFAPT----EEAKEKELANGRLAMLAFLGFI 216
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
VQ VTGKGP +NL HI+DP N
Sbjct: 217 VQHNVTGKGPFDNLLQHISDPWHNT 241
>gi|384253050|gb|EIE26525.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Coccomyxa subellipsoidea C-169]
Length = 272
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 46/244 (18%)
Query: 1 MRRTVKSAPQSIWY-GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNR 59
+R+TV A +++W G D P++L G PGD+G+D GL ADPE A
Sbjct: 30 VRQTVVRAERALWLPGGD-----------APAHLDGSLPGDFGFDPLGLGADPERLAWFA 78
Query: 60 ELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQ 119
E E +H+RWAML G E++ + W++A + + + +P
Sbjct: 79 ESERVHARWAMLAVAGIAVQEVVRPD------VFWYEAALK----SPMPFGNSP-----A 123
Query: 120 SILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGLAD 165
+IL + A ++ M FVE R P + DP+ YPGG F P+
Sbjct: 124 AILGLVAFELFAMHFVEVRRAYDFKNPGSQDQDPIFSNNKLPKHEVGYPGGIFAPV---- 179
Query: 166 DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNF 225
P AELK+KE+KNGRLAM + GF +QA VTGKGP+ +L DH+++P+ ++ A
Sbjct: 180 IPGDLAELKLKEIKNGRLAMLAFAGFVMQAQVTGKGPLASLGDHLSNPIGTTIFSKAV-V 238
Query: 226 VPGK 229
+PG+
Sbjct: 239 IPGQ 242
>gi|169261096|gb|ACA52196.1| chloroplast chlorophyll A/B-binding protein [Oenothera grandiflora]
Length = 109
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 59/66 (89%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
++T ++ S WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNREL
Sbjct: 44 KQTKSASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 103
Query: 62 EVIHSR 67
EVIHSR
Sbjct: 104 EVIHSR 109
>gi|428230866|gb|AFY99055.1| chlorophyll binding protein, partial [Lobelia erinus]
Length = 197
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 111/202 (54%), Gaps = 35/202 (17%)
Query: 42 GWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV-- 93
G+D GLS DPE F + + L EVI+ R+AMLGA G + PEI K G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGKLGLIPAETALP 59
Query: 94 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGGPLGE-- 147
WF+ G I G Y +P ++ ++ LMGF E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 148 --GL--------DPLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
GL DP YPGG F +PLG D ELK+KE+KNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 197 VTGKGPIENLYDHIADPVANNA 218
VTG GP +NL DH+ADPV+NN
Sbjct: 171 VTGVGPFQNLLDHLADPVSNNV 192
>gi|380447755|gb|AFD54060.1| morphogenesis protein [Leymus secalinus]
Length = 268
Score = 115 bits (289), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 117/216 (54%), Gaps = 36/216 (16%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEI 81
Z +YL G PGD+G+D GLS DPE F + R L E+ + R AM+G +G + PE
Sbjct: 55 ZXLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAMMGVVGMIAPEA 113
Query: 82 LSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR 139
L K G+ E WF+AGA I G Y +P ++ ++ L+GF E R
Sbjct: 114 LGKVGLVPSETAIPWFQAGA-IPPAGTYQYWADP--------YTLFVFEMALIGFAEHRR 164
Query: 140 I----GGGPLGE----GL--------DPLYPGG-AFDPLGLADDPD-QFAELKVKELKNG 181
+ G +G+ GL DP YPGG F+PLG + + ELK+KE+KNG
Sbjct: 165 LQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGTKSEKEMKELKLKEIKNG 224
Query: 182 RLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
RLAM + G +QAI TG GP +NL DH++DPV NN
Sbjct: 225 RLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNN 260
>gi|358346846|ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503410|gb|AES84613.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 294
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 108/231 (46%), Gaps = 42/231 (18%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL--------------------------S 49
PDRP + P +L G PGD+G+D GL +
Sbjct: 61 PDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLYNGGLIILAGNTNDHNINQSFGCDSTA 118
Query: 50 ADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDY 109
+DPE+ N + E++H RWAMLGA G PE L+K G+ W+ AG Q + +
Sbjct: 119 SDPESLKWNVQAELVHCRWAMLGAAGIFIPEFLTKIGI-LNTPSWYTAGEQEY------F 171
Query: 110 LGNPNLIHAQSILAIWA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGL 163
L + I WA ++ G V I G D YPGG FDPLG
Sbjct: 172 TDTTTLFIVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 231
Query: 164 AD-DPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADP 213
P + EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL+ H+ADP
Sbjct: 232 GSGSPQKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 282
>gi|302831910|ref|XP_002947520.1| light harvesting complex A [Volvox carteri f. nagariensis]
gi|300267384|gb|EFJ51568.1| light harvesting complex A [Volvox carteri f. nagariensis]
Length = 264
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D L A+P + E++H+R+AML G + PE+L+ G
Sbjct: 68 PGYLDGTLPGDFGFDPLYLGAEPSKLKWYAQAELVHARFAMLAVAGILVPELLTNIGFS- 126
Query: 90 GEAVWFKAGAQIFSEGGLDYLG-NPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP---- 144
W AG + G Y +L Q +L WA FV+ P
Sbjct: 127 ----WPGAGVAWYDAGKFQYFAPASSLFGVQMLLFAWAELRRYQDFVKPGSANQDPIFSN 182
Query: 145 --LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 202
L +G +P YPGG FDP G + LK KE+KNGRLAM + GF QA TG P
Sbjct: 183 NKLPDGNEPGYPGGIFDPFGWSKG--DMKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTP 240
Query: 203 IENLYDHIADPVANNAW 219
++NL H+ADP A W
Sbjct: 241 LKNLATHLADPWATTVW 257
>gi|357450129|ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355484389|gb|AES65592.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PG++G+D GL +DPE + E++H+RWAMLG G
Sbjct: 60 PDRPLWFP--GSSPPEWLDGSLPGNFGFDPLGLGSDPELLKWLAQAELMHARWAMLGVSG 117
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PEIL K G W+ AG+ ++Y +P ++ Q+ LMG+V
Sbjct: 118 ILIPEILEKIGY-VKNFSWYNAGS-------VEYFADPT--------TLFIVQLALMGWV 161
Query: 136 EGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKELK 179
EG R P ++P YPGG FDP+ P+ L+ KE+K
Sbjct: 162 EGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIK 221
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QA+ G PI+NL H+ADP N ++ T+
Sbjct: 222 NGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADPGHVNIFSAFTS 266
>gi|732534|gb|AAB40979.1| light harvesting complex a [Volvox carteri]
Length = 264
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YL G PGD+G+D L A+P + E++H+R+AML G + PE+L+ G
Sbjct: 68 PGYLDGTLPGDFGFDPLYLGAEPSKLKWYAQAELVHARFAMLAVAGILVPELLTNIGFS- 126
Query: 90 GEAVWFKAGAQIFSEGGLDYLG-NPNLIHAQSILAIWACQVVLMGFVEGYRIGGGP---- 144
W AG + G Y +L Q +L WA FV+ P
Sbjct: 127 ----WPGAGVAWYDAGKFQYFAPASSLFGVQMLLFAWAELRRYQDFVKPGSANQDPIFSN 182
Query: 145 --LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 202
L +G +P YPGG FDP G + LK KE+KNGRLAM + GF QA TG P
Sbjct: 183 NKLPDGNEPGYPGGIFDPFGWSKG--DMKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTP 240
Query: 203 IENLYDHIADPVANNAW 219
++NL H+ADP A W
Sbjct: 241 LKNLATHLADPWATTVW 257
>gi|157965821|gb|ABW06947.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 926
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 35/191 (18%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++LTGEFPGD G+D GLS DP+ FA+ R EV H R AMLG +GCV E L F
Sbjct: 18 PAHLTGEFPGDRGFDPLGLSKDPKVFARMRISEVFHGRLAMLGIVGCVGQEWL------F 71
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---PLG 146
+ WF +S+ L LG LI Q I + E +R GG
Sbjct: 72 NKGAWFD-----YSDFDLPRLG---LIALQVIAPL-----------EYWRGNGGFSWNGN 112
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+G D YPG FDPLGL + + K++E+KNGRLAM +M G VQ+ +TGK P+ NL
Sbjct: 113 DGPDRSYPG--FDPLGLTTE-----DTKLREIKNGRLAMSAMLGLEVQSHITGKSPLTNL 165
Query: 207 YDHIADPVANN 217
DH++ P N
Sbjct: 166 GDHLSSPFTAN 176
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 37/192 (19%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PE+L
Sbjct: 573 PAYLTGEFPADRGFDPAGLAADPKVYERMRVAEVFNGRLAMLAIVGCVYPELL------- 625
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG--- 146
G VWF+ ++ D+ A+ + QVV +E +R G G G
Sbjct: 626 GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWR-GNGGFGWDG 666
Query: 147 -EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
E D YPG FDP L + K E+KNGRLAM MFG VQ VT +GP+ N
Sbjct: 667 EEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQNHVTAQGPVAN 719
Query: 206 LYDHIADPVANN 217
L +H+ P+A N
Sbjct: 720 LIEHLRHPLAAN 731
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 33/188 (17%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYLTG++ GD G+D AGL+ADP+ F + R EV H R AML +G V P+IL
Sbjct: 205 PSYLTGQYFGDRGFDPAGLAADPKVFERMRVSEVYHGRLAMLAIVGAVVPDIL------- 257
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGL 149
G+ W++A N + +A++ ++ G + P
Sbjct: 258 GKGAWYEAAQ--------------NAGIGVNEVAVFTAAYGVVEVARGLKANSDPTKN-- 301
Query: 150 DPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 209
YPG FDPL L D K E+KNGRLA+ M G VQ VTG P+ NL +H
Sbjct: 302 ---YPG--FDPLKLTTD-----YTKEAEIKNGRLALTGMLGLEVQRHVTGVSPLVNLVEH 351
Query: 210 IADPVANN 217
+ P+ +N
Sbjct: 352 VKHPLNHN 359
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 95/192 (49%), Gaps = 34/192 (17%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
Q P++LTGE+P D G+D L+ADP +A+ R EV H+R +ML +G + PE+L
Sbjct: 761 QPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSILPELL----- 815
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG-PLG 146
G+ WF+ G + + I IL A E +R GG
Sbjct: 816 --GKGAWFEVGNSV------------DGIKLGFILMAIAAP------TEYWRGNGGFNWD 855
Query: 147 EGL-DPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
+G D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ N
Sbjct: 856 KGTADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMTGLLGLTFQYLATGESPLAN 908
Query: 206 LYDHIADPVANN 217
L H+A+PV N
Sbjct: 909 LAAHLANPVGAN 920
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 95/192 (49%), Gaps = 34/192 (17%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
Q P++LTGE+P D G+D L+ADP +A+ R EV H+R +ML +G + PE+L
Sbjct: 388 QPPAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 442
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG-PLG 146
G+ WF+ G + + I IL A E +R GG
Sbjct: 443 --GKGAWFEVGNSV------------DGIKLGFILMAIAAP------TEYWRGNGGFNWD 482
Query: 147 EGL-DPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
+G D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ N
Sbjct: 483 KGTADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMTGLLGLTFQYLATGESPLAN 535
Query: 206 LYDHIADPVANN 217
L H+A+PV N
Sbjct: 536 LAAHLANPVGAN 547
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 118 AQSILAIW-ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKV 175
A+S++ W G +G G L YP FDPL LA DP +A ++V
Sbjct: 361 AESVMHQWPVAMFAATGHKDGVWFPGAQPPAHLTGEYPADRGFDPLSLAADPTVYARMRV 420
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKG 201
E+ + RL+M ++ G V ++ GKG
Sbjct: 421 SEVFHARLSMLAIVGSIVPELL-GKG 445
>gi|302829360|ref|XP_002946247.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
gi|300269062|gb|EFJ53242.1| hypothetical protein VOLCADRAFT_108856 [Volvox carteri f.
nagariensis]
Length = 256
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 115/233 (49%), Gaps = 29/233 (12%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RR+V + S RP +L P++L GE PGD+G+D GL A+P++ RE
Sbjct: 18 RRSVVAKASS------RPLWLP--GSTPPAHLKGELPGDFGFDPLGLGANPDSLKWFRES 69
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
E++HSRWAM G + EI+ + W+ AG+Q+ S LG L+ +
Sbjct: 70 ELVHSRWAMAAVAGILVQEIVRPD------VFWYSAGSQVESP-----LGPLGLLAFEFF 118
Query: 122 LAIWACQVVLMGFVEGYRIGGGPLGEGL-----DPLYPGGAFDPLGLADDPDQFAELKVK 176
W + + P+ +P YPGG F P P AELKVK
Sbjct: 119 CMHWVELRRWQDLRKPGSVDQDPIFSQYKLPPHEPGYPGGVFAPF----IPGDLAELKVK 174
Query: 177 ELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
E+KNGRLAM + GF + A VTGKGPI L +H+ADP ++ A VPG+
Sbjct: 175 EIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLADPWGTTIFSKAA-VVPGQ 226
>gi|225580693|gb|ACN94454.1| photosystem I light-harvesting cholrophyll-a/b protein 3
[Dunaliella salina]
Length = 286
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 112/214 (52%), Gaps = 33/214 (15%)
Query: 31 SYLTGEFPGDYGWDTAGLSADPET--------FAKNREL---EVIHSRWAMLGALGCVFP 79
YL G PGDYG+D GL DP F R L EVIH+RWAMLGA GC+ P
Sbjct: 68 KYLDGTLPGDYGFDPLGL-LDPTVSNGQGAGGFVNPRWLQYSEVIHARWAMLGAAGCIAP 126
Query: 80 EILSKNGVKFGEAV--WFKAGAQIFSEGGL--DYLGNPNLIHAQSILAIWACQVVLMGFV 135
EIL K GV E WF+ G + G+ D+ +P + ++AI Q + +
Sbjct: 127 EILGKAGVIPAETAVDWFRTG--VIPPAGVYKDFWADPFTLFFIEVVAI---QFAELKRL 181
Query: 136 EGYRIGGGP-----LG-EGL-----DPLYPGGAF-DPLGLADDPDQFAELKVKELKNGRL 183
+ Y+ G LG EGL +P YPGG F + + +LK+ E+KNGRL
Sbjct: 182 QDYKNPGSQSRQYFLGLEGLFKGSDNPAYPGGPFFNFANFGKTEAEMKKLKLNEIKNGRL 241
Query: 184 AMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
AM +MFG+ QA++TG GP +NL H+ADP N
Sbjct: 242 AMLAMFGYGAQAVITGDGPFDNLLAHLADPTGAN 275
>gi|384251522|gb|EIE24999.1| light-harvesting chlorophyll a/b-binding protein Lhca3 [Coccomyxa
subellipsoidea C-169]
Length = 274
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 110/206 (53%), Gaps = 30/206 (14%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ PSYL GE GDYGWD GL A PE R+ E++H+RWAML G + EI+ K GV
Sbjct: 52 EAPSYLNGELAGDYGWDPLGLGAKPEALKWYRQAELVHARWAMLAVAGILAQEIV-KPGV 110
Query: 88 KFGEAVWFKAGAQIFSEG--GLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL 145
F + AG E G+++ G ++ +LA W + +L +VE R
Sbjct: 111 FF-----YNAG---LPENLPGINFGGPEGKVNLGGLLA-W--EFLLFHWVEVRRWQDIKK 159
Query: 146 GEGL--DPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGF 191
+ + DP+ YPGG FDP G + F E++ KE+KNGRLAM + GF
Sbjct: 160 KDSVNQDPIFKGNKVPNPELGYPGGIFDPFGFSK--GNFKEVQTKEIKNGRLAMVAFVGF 217
Query: 192 FVQAIVTGKGPIENLYDHIADPVANN 217
+QA TG+GP+ NL H+A+P NN
Sbjct: 218 IIQAQATGQGPLANLGAHLANPFGNN 243
>gi|326523021|dbj|BAJ88556.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D G ++PE+ + E++H RWAML
Sbjct: 62 GPDRPVWFP--GTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAVA 119
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PEIL K G E W+ AG + +Y +P ++ Q+ LMG+
Sbjct: 120 GILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFVTQMALMGW 163
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
VEG R P ++P YPGG + G P+ L+ KE+
Sbjct: 164 VEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 223
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ Q + TG+GP++NL+ H+ADP N ++ T+
Sbjct: 224 KNGRLAMLAFVGFWFQVVYTGQGPLDNLFAHLADPGHCNIFSAFTS 269
>gi|414589583|tpg|DAA40154.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
gi|414589584|tpg|DAA40155.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
Length = 271
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 33/226 (14%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL ++PE + E++H RWAML A
Sbjct: 62 GPDRPIWFP--GSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLAAA 119
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + P++L++ G WF AG++ +Y +P ++ Q+ LMG+
Sbjct: 120 GILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALMGW 164
Query: 135 VEGYRIGG--GPLGEGLDPLYPGGAFD------PLGLADD--------PDQFAELKVKEL 178
EG R P ++P +P P GL D P+ L+ KE+
Sbjct: 165 AEGRRWADYLRPGCVDIEPRFPNRKNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTKEI 224
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GPI+NL H+ADP N ++ T+
Sbjct: 225 KNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCNIFSAFTS 270
>gi|226495517|ref|NP_001141336.1| uncharacterized protein LOC100273427 [Zea mays]
gi|194704056|gb|ACF86112.1| unknown [Zea mays]
Length = 271
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 33/226 (14%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL ++PE + E++H RWAML A
Sbjct: 62 GPDRPIWFP--GSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLAAA 119
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + P++L++ G WF AG++ +Y +P ++ Q+ LMG+
Sbjct: 120 GILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALMGW 164
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKEL 178
EG R P ++P YPGG FD P+ L+ KE+
Sbjct: 165 AEGRRWADYLRPGCVDIEPRFPNRRNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTKEI 224
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GPI+NL H+ADP N ++ T+
Sbjct: 225 KNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCNIFSAFTS 270
>gi|326508082|dbj|BAJ86784.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526845|dbj|BAK00811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D G ++PE+ + E++H RWAML
Sbjct: 65 GPDRPVWFP--GTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAVA 122
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PEIL K G E W+ AG + +Y +P ++ Q+ LMG+
Sbjct: 123 GILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFVTQMALMGW 166
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
VEG R P ++P YPGG + G P+ L+ KE+
Sbjct: 167 VEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 226
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ Q + TG+GP++NL+ H+ADP N ++ T+
Sbjct: 227 KNGRLAMLAFVGFWFQVVYTGQGPLDNLFAHLADPGHCNIFSAFTS 272
>gi|384247027|gb|EIE20515.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 33/214 (15%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
+TP+YL + PG YG+D L DP + + E++HSR+AM G + PE+L G
Sbjct: 42 SKTPAYLE-DLPGSYGFDPLKLGEDPASLKWYVQSELVHSRFAMAAVAGILIPEVLKAFG 100
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQV----------------V 130
VW++AG + + N + A I A ++
Sbjct: 101 A-VNLPVWYEAGKYAQESSPIPF----NTLIALEIFAFNFVEIKRWQDFKKPGSQGEEGS 155
Query: 131 LMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFG 190
+G +EG+ G G G YPGG FDPLGL+ P + +K++E+KNGRLAM + G
Sbjct: 156 FVG-LEGFFKGTGENG------YPGGVFDPLGLSKGPG-YEAMKLREIKNGRLAMLAFIG 207
Query: 191 FFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
F Q + TGKGPIENL DH+++P+ANN + TN
Sbjct: 208 FASQYLATGKGPIENLLDHLSNPLANN---FTTN 238
>gi|224124190|ref|XP_002330127.1| light-harvesting complex I protein Lhca4 [Populus trichocarpa]
gi|222871261|gb|EEF08392.1| light-harvesting complex I protein Lhca4 [Populus trichocarpa]
Length = 251
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 99/204 (48%), Gaps = 36/204 (17%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+PSYL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ +K G+
Sbjct: 61 SPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 119
Query: 89 FGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPL 145
W+ AG A+ F+ ++ + +L +VE R P
Sbjct: 120 INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNPG 163
Query: 146 GEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
DP+ YPGG F+PL A E K KEL NGRLAM + GF +
Sbjct: 164 CVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT----IEAKEKELANGRLAMLAFLGFVI 219
Query: 194 QAIVTGKGPIENLYDHIADPVANN 217
Q VTGKGP ENL HI+DP N
Sbjct: 220 QHNVTGKGPFENLLQHISDPWHNT 243
>gi|414589586|tpg|DAA40157.1| TPA: hypothetical protein ZEAMMB73_160322 [Zea mays]
Length = 232
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 33/226 (14%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D GL ++PE + E++H RWAML A
Sbjct: 23 GPDRPIWFP--GSSPPPWLDGSLPGDFGFDPLGLGSEPELLRWFAQAELMHGRWAMLAAA 80
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + P++L++ G WF AG++ +Y +P ++ Q+ LMG+
Sbjct: 81 GILVPDLLARWGFIDAGFSWFDAGSR-------EYFADP--------WTLFVSQMALMGW 125
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGA-FDPLGLAD-DPDQFAELKVKEL 178
EG R P ++P YPGG FD P+ L+ KE+
Sbjct: 126 AEGRRWADYLRPGCVDIEPRFPNRKNPVPDVGYPGGLWFDWANWGRGSPEPVMVLRTKEI 185
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ QA+ TG+GPI+NL H+ADP N ++ T+
Sbjct: 186 KNGRLAMLAFVGFWFQAVYTGQGPIDNLLAHLADPGHCNIFSAFTS 231
>gi|427338317|gb|AFY52157.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338319|gb|AFY52158.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338321|gb|AFY52159.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338323|gb|AFY52160.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338325|gb|AFY52161.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338327|gb|AFY52162.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338329|gb|AFY52163.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338331|gb|AFY52164.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338333|gb|AFY52165.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338335|gb|AFY52166.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338337|gb|AFY52167.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338339|gb|AFY52168.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338341|gb|AFY52169.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338343|gb|AFY52170.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338345|gb|AFY52171.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338347|gb|AFY52172.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338349|gb|AFY52173.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338351|gb|AFY52174.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338353|gb|AFY52175.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338355|gb|AFY52176.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338357|gb|AFY52177.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338359|gb|AFY52178.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338361|gb|AFY52179.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338363|gb|AFY52180.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338365|gb|AFY52181.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338367|gb|AFY52182.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338369|gb|AFY52183.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338371|gb|AFY52184.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338373|gb|AFY52185.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338375|gb|AFY52186.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338383|gb|AFY52190.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338385|gb|AFY52191.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338387|gb|AFY52192.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338389|gb|AFY52193.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338391|gb|AFY52194.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338393|gb|AFY52195.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338395|gb|AFY52196.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338397|gb|AFY52197.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338399|gb|AFY52198.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338401|gb|AFY52199.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338403|gb|AFY52200.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338405|gb|AFY52201.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338407|gb|AFY52202.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338409|gb|AFY52203.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338411|gb|AFY52204.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338413|gb|AFY52205.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338415|gb|AFY52206.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338417|gb|AFY52207.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338419|gb|AFY52208.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338421|gb|AFY52209.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338423|gb|AFY52210.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338425|gb|AFY52211.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338427|gb|AFY52212.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338429|gb|AFY52213.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338431|gb|AFY52214.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338433|gb|AFY52215.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338435|gb|AFY52216.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338437|gb|AFY52217.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338439|gb|AFY52218.1| chlorophyll binding protein, partial [Clermontia oblongifolia
subsp. oblongifolia]
gi|427338441|gb|AFY52219.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338443|gb|AFY52220.1| chlorophyll binding protein, partial [Clermontia peleana]
gi|427338445|gb|AFY52221.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338447|gb|AFY52222.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338449|gb|AFY52223.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338451|gb|AFY52224.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338453|gb|AFY52225.1| chlorophyll binding protein, partial [Clermontia drepanomorpha]
gi|427338455|gb|AFY52226.1| chlorophyll binding protein, partial [Clermontia lindseyana]
gi|428230858|gb|AFY99051.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|428230860|gb|AFY99052.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 197
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 110/202 (54%), Gaps = 35/202 (17%)
Query: 42 GWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV-- 93
G+D GLS DPE F + + L EV + R+AMLGA+G + PEI K G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALP 59
Query: 94 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGGPLGE-- 147
WF+ G I G Y +P ++ ++ LMGF E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 148 --GL--------DPLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
GL DP YPGG F +PLG D ELK+KE+KNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 197 VTGKGPIENLYDHIADPVANNA 218
VTG GP +NL DH+ADPV NN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|427338377|gb|AFY52187.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338379|gb|AFY52188.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338381|gb|AFY52189.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|428230862|gb|AFY99053.1| chlorophyll binding protein, partial [Clermontia fauriei]
Length = 197
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 110/202 (54%), Gaps = 35/202 (17%)
Query: 42 GWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV-- 93
G+D GLS DPE F + + L EV + R+AMLGA+G + PEI K G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALP 59
Query: 94 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGGPLGE-- 147
WF+ G I G Y +P ++ ++ LMGF E R+ G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRLQDWYNPGSMGKQY 110
Query: 148 --GL--------DPLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
GL DP YPGG F +PLG D ELK+KE+KNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGFAGSGDPAYPGGPFFNPLGFGKDETSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 197 VTGKGPIENLYDHIADPVANNA 218
VTG GP +NL DH+ADPV NN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|302828616|ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|300268690|gb|EFJ52870.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
Length = 243
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 117/236 (49%), Gaps = 40/236 (16%)
Query: 8 APQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSR 67
A QS G + PK+L +P+ L G++G+D GL D E ++ E++H+R
Sbjct: 26 ARQSWLPGSEIPKHL-----DSPAALA--MAGNFGFDPLGLGKDAEALRWYQQAELVHAR 78
Query: 68 WAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAC 127
AM G + P +L+K G W+ AG ++ E G A+ A
Sbjct: 79 TAMTAVAGILIPGLLTKAGA-LNVPEWYDAG-KVAIESSFAPFG-----------ALLAV 125
Query: 128 QVVLMGFVEG-----YRIGGGPLGEGL------------DPLYPGGAFDPLGLADDPDQF 170
Q+ L GFVE ++ G +G D YPGG FDPLGL+ D D+
Sbjct: 126 QLFLTGFVEAKRWQDFKKPGSQAEKGSFLGFETAFAGTGDNGYPGGIFDPLGLSKDADKL 185
Query: 171 AELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
A+ K+KE+KNGRLAM + GF Q TGKGPI+NL H+ADP N YA+N V
Sbjct: 186 ADWKLKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLADPWHVN---YASNGV 238
>gi|157965819|gb|ABW06946.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 823
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 35/191 (18%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P YLTGE GD G+D AGL+ADP TF + + EV H R +ML +GC+ PE+L
Sbjct: 470 PRYLTGEAFGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------- 522
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPL---G 146
G WF QI+ + +D+ + A+ A QVV +E +R GG L
Sbjct: 523 GNGAWF----QIWDK--VDF----------NRFAVVALQVV--APLEYWRGNGGFLWNDE 564
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
E +D YPG FDPL L + K E+KNGRLAM MFG VQ+ VTGK PI NL
Sbjct: 565 ETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMIGMFGLEVQSHVTGKSPITNL 617
Query: 207 YDHIADPVANN 217
DH++ P+ N
Sbjct: 618 IDHLSSPLTAN 628
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 102/202 (50%), Gaps = 39/202 (19%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 658 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 712
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 713 --GKGAWFEAGDSVDG------------------LKLGFIAMAIAAPTEYWRGHGGFNWQ 752
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
G+ LD YPG FDPL L D K E+KNGRLA+ ++ G Q + TG+ P+
Sbjct: 753 KGD-LDRSYPG--FDPLNLTTD-----YTKAAEVKNGRLALTAVAGLTAQYLATGESPLA 804
Query: 205 NLYDHIADPVANNAWAYATNFV 226
NL H+A+PV N ATN V
Sbjct: 805 NLAAHLANPVGAN---IATNLV 823
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 98/193 (50%), Gaps = 36/193 (18%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+ P++LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L
Sbjct: 284 EPPAHLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCMVGCIVPELL----- 338
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGG---P 144
G+ WF+AG + L + + + E +R GG
Sbjct: 339 --GKGAWFEAGDSVDG------------------LKLGFIAMAIAAPTEYWRGHGGFNWQ 378
Query: 145 LGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 204
G+ LD YPG FDPL L D K E+KNGRLA+ ++ G Q + TG+ P+
Sbjct: 379 KGD-LDRSYPG--FDPLNLTTD-----YTKAAEVKNGRLALTAVAGLTAQYLATGESPLA 430
Query: 205 NLYDHIADPVANN 217
NL H+A+P+ N
Sbjct: 431 NLSAHLANPIGAN 443
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 103/217 (47%), Gaps = 47/217 (21%)
Query: 3 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 62
R +S + +W+ P L P S+LTGE+ GD G+D AGL+ADPETF + R E
Sbjct: 84 RKTQSEDRPLWF----PNTLAP------SWLTGEYFGDRGFDPAGLAADPETFERMRIAE 133
Query: 63 VIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIL 122
V H R AML +G + P+ L G+ +W++A N +
Sbjct: 134 VYHGRLAMLAVVGALVPDYL-------GKGIWYEAAQ--------------NAGIGVKEV 172
Query: 123 AIWACQVVLMGFVEGYRIGGGPLGEGLDP--LYPGGAFDPLGLADDPDQFAELKVKELKN 180
AI+ + G + E DP +YPG FDPL L D K E+KN
Sbjct: 173 AIFTAAYGVFEVARGVK-------ENSDPTTVYPG--FDPLNLTTD-----YTKEAEIKN 218
Query: 181 GRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
GRLA+ ++ GF VQ V G P+ NL DH+ P+ N
Sbjct: 219 GRLALTALLGFEVQRHVVGGSPLANLADHLQQPLQRN 255
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 7/71 (9%)
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENL 206
+G D YPG FDPL L D+ E K+KE+KNGRLAM +M G VQ+ +TGK P+ NL
Sbjct: 5 DGPDQSYPG--FDPLRLTDE-----ETKLKEIKNGRLAMTAMLGLEVQSHLTGKSPLVNL 57
Query: 207 YDHIADPVANN 217
+H+++P + N
Sbjct: 58 SEHLSNPASVN 68
>gi|169195|gb|AAA33701.1| Major Cab protein [Petunia x hybrida]
Length = 62
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%)
Query: 168 DQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
+ FAELKVKE+KNGRLA FSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVP
Sbjct: 1 EAFAELKVKEIKNGRLAAFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVP 60
Query: 228 GK 229
GK
Sbjct: 61 GK 62
>gi|27754356|gb|AAO22627.1| putative light-harvesting chlorophyll a/b binding protein
[Arabidopsis thaliana]
Length = 270
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DP+T + E+IHSRWAML G
Sbjct: 63 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W+ AG++ +Y + ++ Q+VLMG+
Sbjct: 121 IIIPECLERLGF-IENFSWYDAGSR-------EYFADST--------TLFVAQMVLMGWA 164
Query: 136 EGYRIGG--GPLGEGLDPLYPGGAFD------PLGLADD--------PDQFAELKVKELK 179
EG R P ++P YP P GL D P+ L+ KE+K
Sbjct: 165 EGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIK 224
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QA T + PIENL H+ADP N ++ T+
Sbjct: 225 NGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269
>gi|302848571|ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
gi|300258785|gb|EFJ43018.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
Length = 257
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 101/205 (49%), Gaps = 35/205 (17%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
P YL GE GDYGWD GL ADP R+ E++H+RWAMLG G + E++ +
Sbjct: 41 APDYLKGELAGDYGWDPLGLGADPVALRWYRQSELVHARWAMLGVAGVLVQEVVKPD--- 97
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GP 144
F E GL P ++ + A + +LM +VE R G
Sbjct: 98 -----------VYFYEAGLPQ-NLPEPFTNVNMGGLLAWEFILMHWVEVRRWQDYKNFGS 145
Query: 145 LGEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFF 192
+ E DP+ YPGG FDPLG + EL+ KE+KNGRLAM + GF
Sbjct: 146 VNE--DPIFKGNKVPNPEMGYPGGIFDPLGFSK--GNLKELQTKEIKNGRLAMVAYMGFV 201
Query: 193 VQAIVTGKGPIENLYDHIADPVANN 217
+QA TGKGP+ L H+++P NN
Sbjct: 202 LQAQATGKGPLAALSAHLSNPFGNN 226
>gi|15221956|ref|NP_173349.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
gi|21554357|gb|AAM63464.1| PSI type II chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
gi|56381917|gb|AAV85677.1| At1g19150 [Arabidopsis thaliana]
gi|58331805|gb|AAW70400.1| At1g19150 [Arabidopsis thaliana]
gi|332191690|gb|AEE29811.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
Length = 270
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DP+T + E+IHSRWAML G
Sbjct: 63 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W+ AG++ +Y + ++ Q+VLMG+
Sbjct: 121 IIIPECLERLGF-IENFSWYDAGSR-------EYFADST--------TLFVAQMVLMGWA 164
Query: 136 EGYRIGG--GPLGEGLDPLYPGGAFD------PLGLADD--------PDQFAELKVKELK 179
EG R P ++P YP P GL D P+ L+ KE+K
Sbjct: 165 EGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIK 224
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QA T + PIENL H+ADP N ++ T+
Sbjct: 225 NGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 269
>gi|118489040|gb|ABK96327.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 251
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 99/204 (48%), Gaps = 36/204 (17%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+PSYL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ +K G+
Sbjct: 61 SPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 119
Query: 89 FGEAVWFKAG-AQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPL 145
W+ AG A+ F+ ++ + +L +VE R P
Sbjct: 120 INAPQWYDAGKAEYFASSS----------------TLFVIEFILFHYVEIRRWQDIKNPG 163
Query: 146 GEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
DP+ YPGG F+PL A E K KEL NGRLAM + GF +
Sbjct: 164 CVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPT----IEAKEKELANGRLAMLAFLGFVI 219
Query: 194 QAIVTGKGPIENLYDHIADPVANN 217
Q VTGKGP +NL HI+DP N
Sbjct: 220 QHNVTGKGPFDNLLQHISDPWHNT 243
>gi|326489913|dbj|BAJ94030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 112/226 (49%), Gaps = 34/226 (15%)
Query: 15 GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 74
GPDRP + P +L G PGD+G+D G ++PE+ + E++H RWAML
Sbjct: 65 GPDRPVWFP--GTAPPPWLDGSLPGDFGFDPLGFGSEPESLRWFAQAELMHGRWAMLAVA 122
Query: 75 GCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGF 134
G + PEIL K G E W+ AG + +Y +P ++ Q+ LMG+
Sbjct: 123 GILIPEILQKWGF-MEEFSWYTAGER-------EYFADP--------WTLFVTQMALMGW 166
Query: 135 VEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGL--ADDPDQFAELKVKEL 178
VEG R P ++P YPGG + G P+ L+ KE+
Sbjct: 167 VEGRRWMDYLNPGSVDIEPRFPNRKNPTPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEI 226
Query: 179 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
KNGRLAM + GF+ Q + TG+GP+ NL+ H+ADP N ++ T+
Sbjct: 227 KNGRLAMLAFVGFWFQVVYTGQGPLGNLFAHLADPGHCNIFSAFTS 272
>gi|30692874|ref|NP_190331.3| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
gi|115385|sp|P27521.1|CA4_ARATH RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCI type III CAB-4; Flags: Precursor
gi|166646|gb|AAA32760.1| light-harvesting chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|6522530|emb|CAB61973.1| CHLOROPHYLL A-B BINDING PROTEIN 4 PRECURSOR homolog [Arabidopsis
thaliana]
gi|20260362|gb|AAM13079.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|21554365|gb|AAM63472.1| chlorophyll a-b binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|23197770|gb|AAN15412.1| chlorophyll A-B binding protein 4 precursor homolog [Arabidopsis
thaliana]
gi|332644764|gb|AEE78285.1| chlorophyll a-b binding protein 4 [Arabidopsis thaliana]
Length = 251
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ +K G+
Sbjct: 63 SPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 121
Query: 89 FGEAVWFKAGA-QIFSEGGLDYLGNPNLIHAQSILAIWACQ----VVLMGFVEGYRIGGG 143
W+ AG Q F+ ++ L H I + V + Y + G
Sbjct: 122 INVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKG 181
Query: 144 PLGEGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 203
+G YPGG F+PL A P Q E K KEL NGRLAM + GF VQ VTGKGP
Sbjct: 182 EVG------YPGGIFNPLNFA--PTQ--EAKEKELANGRLAMLAFLGFVVQHNVTGKGPF 231
Query: 204 ENLYDHIADPVANN 217
ENL H++DP N
Sbjct: 232 ENLLQHLSDPWHNT 245
>gi|7271947|gb|AAF44703.1|AF241525_1 chlorophyll a/b-binding protein type III [Alonsoa meridionalis]
Length = 193
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 112/203 (55%), Gaps = 35/203 (17%)
Query: 39 GDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA 92
GD+G+D GLS DPE F + + L E+I+ R+AMLGA+G + PEIL K G+ E
Sbjct: 1 GDFGFDPLGLS-DPEGTGGFIEPKWLAYGEIINGRFAMLGAVGAIAPEILGKAGLIPAET 59
Query: 93 V--WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG----GPLG 146
WF+ G I G +Y + ++ ++ LMGF E R G +G
Sbjct: 60 ALPWFQTGV-IPPAGTYNYWADG--------YTLFVLEMALMGFAEHRRFQDWAKPGSMG 110
Query: 147 E--------GL----DPLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
+ GL DP YPGG F +PLG D ELK+KE+KNGRLAM ++ G+F+
Sbjct: 111 KQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFI 170
Query: 194 QAIVTGKGPIENLYDHIADPVAN 216
Q +VTG GP +NL DH+ADP N
Sbjct: 171 QGLVTGVGPFQNLLDHLADPWHN 193
>gi|302756045|ref|XP_002961446.1| light-harvesting complex [Selaginella moellendorffii]
gi|302776390|ref|XP_002971365.1| light-harvesting complex [Selaginella moellendorffii]
gi|300161347|gb|EFJ27963.1| light-harvesting complex [Selaginella moellendorffii]
gi|300170105|gb|EFJ36706.1| light-harvesting complex [Selaginella moellendorffii]
Length = 250
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 17 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 76
+RP +L S P +L G GD+G+D L DPET + E++HSR+AM G G
Sbjct: 42 ERPIWLPGLSP--PQHLDGSLAGDFGFDPLELGKDPETLRWYVQAELVHSRFAMAGIAGI 99
Query: 77 VFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVE 136
+ ++L G + VW++AGA F ++ Q++LMG+ E
Sbjct: 100 LVTDLLRTVGGR-DLPVWYEAGATEFEFA--------------DTRTLFVVQLILMGYAE 144
Query: 137 GYR----------------IGGGPLGEGLDPLYPGGAF-DPLGLADDPDQFAELKVKELK 179
R +G GL YPGG F DP GL D + LK KELK
Sbjct: 145 TRRYYDYISPGSQAAQDTFLGFEDALAGLQSGYPGGPFFDPAGLGRDINNARTLKEKELK 204
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
NGRLAM ++ G FVQA T GPI+NL H++DP N
Sbjct: 205 NGRLAMVAILGVFVQAFFTKTGPIDNLLTHVSDPWHNT 242
>gi|8954053|gb|AAF82226.1|AC069143_2 Contains similarity to a chlorophyll a/b-binding protein type II
from Arabidopsis thaliana gi|S46295 and contains a
chlorophyll A-B binding proteins PF|00504 domain
[Arabidopsis thaliana]
Length = 267
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DP+T + E+IHSRWAML G
Sbjct: 63 PDRPLWFP--GSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 120
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W+ AG++ +Y + ++ Q+VLMG+
Sbjct: 121 IIIPECLERLGF-IENFSWYDAGSR-------EYFADST--------TLFVAQMVLMGWA 164
Query: 136 EGYRIGG--GPLGEGLDPLYPGGAFD------PLGLADD--------PDQFAELKVKELK 179
EG R P ++P YP P GL D P+ L+ KE+K
Sbjct: 165 EGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIK 224
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
NGRLAM + GF QA T + PIENL H+ADP N ++ +
Sbjct: 225 NGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSVS 267
>gi|145078792|tpg|DAA05884.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Euglena gracilis]
Length = 295
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 101/190 (53%), Gaps = 37/190 (19%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YLTGEFPGD G+D AGLSADPETF + R E+IH R AML +G + P+ L
Sbjct: 95 PAYLTGEFPGDRGFDPAGLSADPETFDRMRIAEIIHGRVAMLAVVGALVPDFL------- 147
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGL 149
G+ WF+A A G+D I Q ++G+ + G G L +
Sbjct: 148 GKGNWFEAPAI----AGID---------------IGDVQQFILGYGV-FEFGRG-LNKSS 186
Query: 150 DP--LYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLY 207
+P +YPG FDPL L D K E+KNGRLA+ +M GF VQ V G P+ NL
Sbjct: 187 NPAAIYPG--FDPLNLTSD-----YTKEAEIKNGRLALTAMLGFEVQRHVVGGSPLANLS 239
Query: 208 DHIADPVANN 217
DH+ P+ N
Sbjct: 240 DHLQQPLKFN 249
>gi|428230864|gb|AFY99054.1| chlorophyll binding protein, partial [Cyanea asplenifolia]
Length = 197
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 109/202 (53%), Gaps = 35/202 (17%)
Query: 42 GWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEAV-- 93
G+D GLS DPE F + + L EVI+ R+AMLGA G + PEI K G+ E
Sbjct: 1 GFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIFGKLGLIPAETALP 59
Query: 94 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI----GGGPLGE-- 147
WF+ G I G Y +P ++ ++ LMGF E R G +G+
Sbjct: 60 WFQTGV-IPPAGSYTYWADP--------YTLFVFEMALMGFAEHRRFQDWYNPGSMGKQY 110
Query: 148 --GLD--------PLYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAI 196
GL+ P YPGG F +PLG D ELK+KE+KNGRLAM ++ G+F+Q +
Sbjct: 111 FLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGL 170
Query: 197 VTGKGPIENLYDHIADPVANNA 218
VTG GP +NL DH+ADPV NN
Sbjct: 171 VTGVGPFQNLLDHLADPVNNNV 192
>gi|157965827|gb|ABW06950.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 610
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 37/192 (19%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PE+L
Sbjct: 259 PAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAMLAIVGCVYPELL------- 311
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG--- 146
G VWF+ ++ D+ A+ + QVV +E +R G G G
Sbjct: 312 GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWR-GNGGFGWDG 352
Query: 147 -EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
E D YPG FDP L + K E+KNGRLAM MFG VQ+ VT +GP+ N
Sbjct: 353 EEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVAN 405
Query: 206 LYDHIADPVANN 217
L +H+ P+A N
Sbjct: 406 LMEHLRHPLAAN 417
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 34/190 (17%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++LTGE+P D G+D L+ADP +A+ R EV H+R +ML +G + PE+L
Sbjct: 76 PAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------- 128
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGE-- 147
G+ WF+AG + + + + + E +R GG +
Sbjct: 129 GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDKG 170
Query: 148 GLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLY 207
D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ NL
Sbjct: 171 AADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLA 223
Query: 208 DHIADPVANN 217
H+A+PV N
Sbjct: 224 AHLANPVGTN 233
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 34/190 (17%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++LTGE+P D G+D L+ADP +A+ R EV H+R +ML +G + PE+L
Sbjct: 447 PAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------- 499
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGE-- 147
G+ WF+AG + + + + + E +R GG +
Sbjct: 500 GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDKG 541
Query: 148 GLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLY 207
D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ NL
Sbjct: 542 AADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLA 594
Query: 208 DHIADPVANN 217
H+A+PV N
Sbjct: 595 AHLANPVGAN 604
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 174 KVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANN 217
K E+KNGRLA+ +M G VQ VTG P+ NL +H+ P+ +N
Sbjct: 2 KEAEIKNGRLALTAMLGLEVQRHVTGVSPLVNLVEHVKHPLGHN 45
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 118 AQSILAIW-ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKV 175
A+S++ W G +G G L YP FDPL LA DP +A ++V
Sbjct: 47 AESVMHQWPVAMFAATGHKDGVWFPGATPPAHLTGEYPADRGFDPLSLAADPTVYARMRV 106
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKG 201
E+ + RL+M ++ G V ++ GKG
Sbjct: 107 SEVFHARLSMLAIVGAIVPEVL-GKG 131
>gi|87313221|gb|ABD37907.1| light-harvesting chlorophyll-a/b binding protein Lhca5
[Chlamydomonas incerta]
Length = 257
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 114/241 (47%), Gaps = 47/241 (19%)
Query: 2 RRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 61
RR+V S S RP +L P++L GE PGD+G+D GL A+ E+ +E
Sbjct: 19 RRSVVSKASS------RPLWLP--GSTPPAHLKGELPGDFGFDPLGLGANAESLKWFKES 70
Query: 62 EVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 121
E++H RWAM G + EI+ + W+ AG ++ S G
Sbjct: 71 ELVHCRWAMAAVAGILVQEIVRPD------VFWYNAGKEVESPLG--------------P 110
Query: 122 LAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGLADDP 167
L + A + LM +VE R P DP+ YPGG F P P
Sbjct: 111 LGLLAVEFFLMHWVELRRWQDLRKPGSVDQDPIFSQYKLPAHEVGYPGGVFAPF----IP 166
Query: 168 DQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 227
AELKVKE+KNGRLAM + GF + A VTGKGPI L +H+ADP ++ A VP
Sbjct: 167 GDLAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLADPFGTTIFSKAA-VVP 225
Query: 228 G 228
G
Sbjct: 226 G 226
>gi|224140409|ref|XP_002323575.1| predicted protein [Populus trichocarpa]
gi|222868205|gb|EEF05336.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 121/260 (46%), Gaps = 67/260 (25%)
Query: 6 KSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE----------- 53
K AP+ SI PDRP + + P YL G GDYG+D GL E
Sbjct: 36 KKAPKKSIKTIPDRPLWYP--GAKAPEYLDGSLVGDYGFDPFGLGRPAEYLQFELDSLDQ 93
Query: 54 TFAKN--------------------------------RELEVIHSRWAMLGALGCVFPEI 81
AKN RE E+IH RWAML LG + E
Sbjct: 94 NLAKNLAGDIIGTRTEVSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEW 153
Query: 82 LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG 141
L+ GV W AG EG YLG P +++ I +V+++G++E R
Sbjct: 154 LT--GV-----TWQDAGKVELVEGS-SYLGQPLPFSITTLILI---EVLVIGYIEFQR-- 200
Query: 142 GGPLGEGLDP---LYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV 197
LDP LYPGG F DPLGLA DP++ A L++ E+K+ RLAM + GF VQA V
Sbjct: 201 ----NAELDPEKRLYPGGNFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWV 256
Query: 198 TGKGPIENLYDHIADPVANN 217
TGKGP+ N H++DP+
Sbjct: 257 TGKGPLNNWATHLSDPLHTT 276
>gi|118489398|gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 283
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 121/260 (46%), Gaps = 67/260 (25%)
Query: 6 KSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE----------- 53
K AP+ SI PDRP + + P YL G GDYG+D GL E
Sbjct: 36 KKAPKKSIKTIPDRPLWYP--GAKAPEYLDGSLVGDYGFDPFGLGRPAEYLQFELDSLDQ 93
Query: 54 TFAKN--------------------------------RELEVIHSRWAMLGALGCVFPEI 81
AKN RE E+IH RWAML LG + E
Sbjct: 94 NLAKNLAGDIIGTRTEVSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEW 153
Query: 82 LSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG 141
L+ GV W AG EG YLG P +++ I +V+++G++E R
Sbjct: 154 LT--GV-----TWQDAGKVELVEGS-SYLGQPLPFSITTLILI---EVLVIGYIEFQR-- 200
Query: 142 GGPLGEGLDP---LYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIV 197
LDP LYPGG F DPLGLA DP++ A L++ E+K+ RLAM + GF VQA V
Sbjct: 201 ----NAELDPEKRLYPGGNFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWV 256
Query: 198 TGKGPIENLYDHIADPVANN 217
TGKGP+ N H++DP+
Sbjct: 257 TGKGPLNNWATHLSDPLHTT 276
>gi|159479992|ref|XP_001698070.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|40714517|dbj|BAD06922.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
gi|158273869|gb|EDO99655.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 257
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 118/243 (48%), Gaps = 42/243 (17%)
Query: 2 RRTVKSAPQSIW-YGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRE 60
R + +SA +S+ RP +L P++L G+ PGD+G+D GL A+ E+ +E
Sbjct: 12 RPSARSARRSVVAKASSRPLWLP--GSTPPAHLKGDLPGDFGFDPLGLGANAESLKWFKE 69
Query: 61 LEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 120
E++HSRWAM G + EI+ + W+ AG ++ S G
Sbjct: 70 SELVHSRWAMAAVAGILVQEIVRPD------VFWYNAGKEVESPLG-------------- 109
Query: 121 ILAIWACQVVLMGFVEGYRIGG--GPLGEGLDPL------------YPGGAFDPLGLADD 166
L + A + LM +VE R P DP+ YPGG F P
Sbjct: 110 PLGLLAVEFFLMHWVEVRRWQDLRKPGSVDQDPIFSQYKLPPHEVGYPGGVFAPF----I 165
Query: 167 PDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFV 226
P AELKVKE+KNGRLAM + GF + A VTGKGPI L +H+ADP ++ A V
Sbjct: 166 PGDLAELKVKEIKNGRLAMLAFVGFVMAAQVTGKGPIAALQEHLADPWGTTIFSKAA-VV 224
Query: 227 PGK 229
PG+
Sbjct: 225 PGQ 227
>gi|159474444|ref|XP_001695335.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|158275818|gb|EDP01593.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 239
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 27 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG 86
P++L + PG+YG+D L +P + + E EVIH RWAMLG G + E+L
Sbjct: 43 SDAPAWLPDDLPGNYGFDPLSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELL---- 98
Query: 87 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG 146
G W+ A + G + G ++LA + V M EG R G
Sbjct: 99 ---GYGNWYDAPLWAVNGGKATWFGIEVPFDLNALLAF---EFVAMAAAEGQR------G 146
Query: 147 EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 203
+ +YPGGAFDPLG A D + ELK+KE+KNGRLAM + GF Q TGKGPI
Sbjct: 147 DAGGVVYPGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPI 203
>gi|356516812|ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Glycine max]
Length = 252
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 98/203 (48%), Gaps = 34/203 (16%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+P+YL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ +K G+
Sbjct: 62 SPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 120
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPLG 146
W+ AG +Y + + ++ + +L +VE R P
Sbjct: 121 INAPQWYDAGKS-------EYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGS 165
Query: 147 EGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
DP+ YPG F+PL A E K KEL NGRLAM + GF VQ
Sbjct: 166 VNQDPIFKQYSLPQHECGYPGSVFNPLNFAPT----LEAKEKELANGRLAMLAFLGFIVQ 221
Query: 195 AIVTGKGPIENLYDHIADPVANN 217
VTGKGP ENL H++DP N
Sbjct: 222 HNVTGKGPFENLLQHLSDPWHNT 244
>gi|346987811|gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 286
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 120/263 (45%), Gaps = 67/263 (25%)
Query: 3 RTVKSAPQSIWY-GPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-------- 53
RT K+AP+ DRP + + P YL G GDYG+D GL E
Sbjct: 36 RTKKAAPKKFSKPSADRPLWYP--GAKAPEYLDGSLVGDYGFDPFGLGKPVEYLQYDLDS 93
Query: 54 ---TFAKN--------------------------------RELEVIHSRWAMLGALGCVF 78
AKN RE E+IH RWAML LG +
Sbjct: 94 LDQNLAKNMAGDIIGTRVESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS 153
Query: 79 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGY 138
E L+ GV W AG EG YLG P ++ IW +V+L+G++E
Sbjct: 154 VEWLT--GV-----TWQDAGKVELVEGS-SYLGQPLPFSISTL--IW-IEVLLIGYIEFQ 202
Query: 139 RIGGGPLGEGLDP---LYPGGAF-DPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
R LDP LYPGG F DPLGLA DP++ A L++ E+K+ RLAM GF VQ
Sbjct: 203 R------NAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVGFLGFAVQ 256
Query: 195 AIVTGKGPIENLYDHIADPVANN 217
A VTGKGP+ N H++DP+
Sbjct: 257 AAVTGKGPLNNWATHLSDPLHTT 279
>gi|4689382|gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 119/259 (45%), Gaps = 64/259 (24%)
Query: 6 KSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE-----------T 54
K+AP+ + GP + L + P +L G GDYG+D GL E
Sbjct: 40 KAAPKKVSKGPSTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQN 99
Query: 55 FAKN--------------------------------RELEVIHSRWAMLGALGCVFPEIL 82
AKN RE E+IH RWAML LG + E L
Sbjct: 100 LAKNEAGIIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWL 159
Query: 83 SKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGG 142
+ GV W AG EG YLG P ++ IW +V+++G++E R
Sbjct: 160 T--GV-----TWQDAGKVELVEGS-SYLGQPLPFSITTL--IW-IEVLVIGYIEFQR--- 205
Query: 143 GPLGEGLDP---LYPGGA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVT 198
LDP LYPGG+ FDPLGLA DP++ A L++ E+K+ RLAM GF VQA T
Sbjct: 206 ---NAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAAT 262
Query: 199 GKGPIENLYDHIADPVANN 217
GKGP+ N H++DP+
Sbjct: 263 GKGPLNNWATHLSDPLHTT 281
>gi|157965823|gb|ABW06948.1| chloroplast light-harvesting complex I protein precursor [Euglena
gracilis]
Length = 582
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 37/192 (19%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P+YLTGEFP D G+D AGL+ADP+ + + R EV + R AML +GCV+PE+L
Sbjct: 229 PAYLTGEFPADRGFDPAGLAADPKVYERMRIAEVFNGRLAMLAIVGCVYPELL------- 281
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLG--- 146
G VWF+ ++ D+ A+ + QVV +E +R G G G
Sbjct: 282 GNGVWFEVWNKV------DFYR----------FALISLQVV--APLEYWR-GNGGFGWDG 322
Query: 147 -EGLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 205
E D YPG FDP L + K E+KNGRLAM MFG VQ+ VT +GP+ N
Sbjct: 323 EEKYDRSYPG--FDPCNLTTE-----YTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVAN 375
Query: 206 LYDHIADPVANN 217
L +H+ P+A N
Sbjct: 376 LIEHLRHPLAAN 387
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 34/190 (17%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++LTGE+P D G+D L+ADP +A+ R EV H+R +ML +G + PE+L
Sbjct: 46 PAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLSMLAIVGAIVPEVL------- 98
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGE-- 147
G+ WF+AG + + + + + E +R GG +
Sbjct: 99 GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDKG 140
Query: 148 GLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLY 207
D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ NL
Sbjct: 141 AADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLA 193
Query: 208 DHIADPVANN 217
H+A+PV N
Sbjct: 194 AHLANPVGAN 203
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 34/190 (17%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
P++LTGE+P D G+D L+ADP +A+ R EV H+R ML +G + PE+L
Sbjct: 419 PAHLTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLCMLAIVGAIVPEVL------- 471
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGE-- 147
G+ WF+AG + + + + + E +R GG +
Sbjct: 472 GKGAWFEAGNSVDG------------------IKLGFIAMAIAAPTEYWRGNGGFNWDKG 513
Query: 148 GLDPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLY 207
D YPG FDPL L D K E+KNGRLAM + G Q + TG+ P+ NL
Sbjct: 514 AADRSYPG--FDPLKLTTD-----YTKAAEIKNGRLAMAGLLGLTFQYLATGESPLANLA 566
Query: 208 DHIADPVANN 217
H+A+PV N
Sbjct: 567 AHLANPVGAN 576
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 118 AQSILAIW-ACQVVLMGFVEGYRIGGGPLGEGLDPLYPGG-AFDPLGLADDPDQFAELKV 175
A+S++ W G +G G L YP FDPL LA DP +A ++V
Sbjct: 17 AESVMHQWPVAMFAATGHKDGVWFPGATPPAHLTGEYPADRGFDPLSLAADPTVYARMRV 76
Query: 176 KELKNGRLAMFSMFGFFVQAIVTGKG 201
E+ + RL+M ++ G V ++ GKG
Sbjct: 77 SEVFHARLSMLAIVGAIVPEVL-GKG 101
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 26/174 (14%)
Query: 39 GDYGWDTA--------GLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNG--VK 88
G +GWD G T + E+ + R AM+G G ++ G
Sbjct: 316 GGFGWDGEEKYDRSYPGFDPCNLTTEYTKAAEIKNGRLAMIGMFGLEVQSHVTAQGPVAN 375
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEG 148
E + A I NL H +A++A G +G G
Sbjct: 376 LIEHLRHPLAANI----------GANLAHPWPPVAMFATT----GHKDGVWFPGATPPAH 421
Query: 149 LDPLYPGG-AFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 201
L YP FDPL LA DP +A ++V E+ + RL M ++ G V ++ GKG
Sbjct: 422 LTGEYPADRGFDPLSLAADPTVYARMRVSEVFHARLCMLAIVGAIVPEVL-GKG 474
>gi|297844880|ref|XP_002890321.1| hypothetical protein ARALYDRAFT_472139 [Arabidopsis lyrata subsp.
lyrata]
gi|297336163|gb|EFH66580.1| hypothetical protein ARALYDRAFT_472139 [Arabidopsis lyrata subsp.
lyrata]
Length = 269
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 109/225 (48%), Gaps = 34/225 (15%)
Query: 16 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 75
PDRP + P +L G PGD+G+D GL +DP+T + E+IHSRWAML G
Sbjct: 62 PDRPLWFP--GSAPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTG 119
Query: 76 CVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 135
+ PE L + G W++AG++ +Y + ++ Q+VLMG+
Sbjct: 120 ILIPECLERLGF-IENFSWYEAGSR-------EYFADST--------TLFVAQMVLMGWA 163
Query: 136 EGYRIGG--GPLGEGLDPLYPGGAFD------PLGLADD--------PDQFAELKVKELK 179
EG R P ++P YP P GL D P+ L+ KE+K
Sbjct: 164 EGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIK 223
Query: 180 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATN 224
NGRLAM + GF QA T + PIENL H+ADP N ++ T+
Sbjct: 224 NGRLAMLAFVGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTS 268
>gi|255547367|ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223546345|gb|EEF47847.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 251
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+P+YL G PGD G+D GL+ DPE + E+++ RWAMLG G + PE+ +K G+
Sbjct: 61 SPAYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI- 119
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPLG 146
W+ AG + +Y S ++ + +L +VE R P
Sbjct: 120 INVPKWYDAGKE-------EYFA--------SSSTLFVIEFILFHYVEIRRWQDIKNPGS 164
Query: 147 EGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
DP+ YPGG F+PL A E K KEL NGRLAM + GF +Q
Sbjct: 165 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----LEAKEKELANGRLAMLAFLGFVIQ 220
Query: 195 AIVTGKGPIENLYDHIADPVAN 216
VTGKGP +NL H++DP N
Sbjct: 221 HNVTGKGPFDNLLQHLSDPWHN 242
>gi|33438474|emb|CAE30280.1| chlorophyll a /b binding protein [Beta vulgaris]
Length = 252
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 99/202 (49%), Gaps = 34/202 (16%)
Query: 29 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVK 88
+P+YL G PGD G+D L+ DPE + E+++ RWAMLG G + PE+ ++ G+
Sbjct: 62 SPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTQIGI- 120
Query: 89 FGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPLG 146
W+ AG Q +Y S ++ + +L +VE R P
Sbjct: 121 INVPKWYDAGKQ-------EYFA--------SSSTLFVIEFILFHYVEIRRWQDIKNPGS 165
Query: 147 EGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQ 194
DP+ YPGG F+PL A AE K KEL NGRLAM + GF VQ
Sbjct: 166 VNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPT----AEAKEKELANGRLAMLAFLGFIVQ 221
Query: 195 AIVTGKGPIENLYDHIADPVAN 216
VTGKGP +NL H++DP N
Sbjct: 222 HNVTGKGPFDNLLQHLSDPWHN 243
>gi|1262851|gb|AAB19042.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 55
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/55 (94%), Positives = 54/55 (98%)
Query: 175 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 229
VKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADP ANNAWAYATNFVPGK
Sbjct: 1 VKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPAANNAWAYATNFVPGK 55
>gi|22753|emb|CAA78932.1| Lhca4 protein,Type 4 protein of light-harvesting complex of
photosystem I [Pinus sylvestris]
Length = 251
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 34/204 (16%)
Query: 28 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 87
+PSYL G PGD G+D GL+ DPE+ + E+++ RWAMLG G + PE+L+ G+
Sbjct: 60 SSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSIGL 119
Query: 88 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIG--GGPL 145
W+ AG ++Y + + ++ + +L +VE R P
Sbjct: 120 -INVPKWYDAGK-------VEYFASSS--------TLFVIEFILFHYVELRRWQDIKYPG 163
Query: 146 GEGLDPL------------YPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFV 193
DPL YPGG F+PL + E K KEL NGRLAM + GF V
Sbjct: 164 SVNQDPLFKQYSLPPNEVGYPGGIFNPLNFSPS----MEAKEKELANGRLAMLAFLGFVV 219
Query: 194 QAIVTGKGPIENLYDHIADPVANN 217
Q VTGKGP +NL H++DP N
Sbjct: 220 QHNVTGKGPFDNLLQHLSDPWHNT 243
>gi|255070015|ref|XP_002507089.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226522364|gb|ACO68347.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 227
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 104/196 (53%), Gaps = 22/196 (11%)
Query: 30 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKF 89
PSYL G P DYG+D GL +P+ A+ +E E+IH+RWAMLG G EI++ G+
Sbjct: 46 PSYLDGSMPCDYGFDPLGLGKEPDNLARFQEAELIHARWAMLGVSGAAGAEIIT--GIN- 102
Query: 90 GEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIGGGPLGEGL 149
W +A Q YLGN + AI A +V +M +VE R G +
Sbjct: 103 ----WVEAPVQ----SQQTYLGNTIPF---PLPAIAAIEVFVMAYVESKR---GSETDRS 148
Query: 150 DPLYPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTG-KGPIENLYD 208
+YPGGAFDP G + D F +LK KEL NGR+AM + G +A +GP+ L
Sbjct: 149 KRMYPGGAFDPAGFSKGAD-FEKLKRKELANGRVAMLAFAGIIGEAQANNLEGPVAALAR 207
Query: 209 HIADPVANNAWAYATN 224
H+ADP NA ATN
Sbjct: 208 HLADPWHVNA---ATN 220
>gi|168068456|ref|XP_001786080.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662173|gb|EDQ49108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 115/237 (48%), Gaps = 30/237 (12%)
Query: 1 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL------SADPET 54
M + +APQ+ +RP + Q P +L G PGD+G+D GL +DPET
Sbjct: 52 MTISAVAAPQN-----ERPLWFP--GSQAPEWLDGSLPGDFGFDPLGLVLRTCAGSDPET 104
Query: 55 FAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAG-AQIFSEGGLDYLGNP 113
+ E++H RWAMLGA G PE L+K G+ W AG A F++
Sbjct: 105 LKWFVQAELVHCRWAMLGAAGIFIPEALTKMGI-LNTPSWTVAGDADYFTD-------KT 156
Query: 114 NLIHAQSILAIWA-----CQVVLMGFVEGYRIGGGPLGEGLDPLYPGGA-FDPLGLADDP 167
L + IL WA +V G V + G D YPGG FDPLG
Sbjct: 157 TLFVIELILFAWAEGRRWADIVNPGCVNVDPVFPNNKLTGTDVGYPGGLWFDPLGWGQTS 216
Query: 168 D--QFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYA 222
D + +L+ +E+KNGRLAM ++ G VQA T GPI+NL H+ DP N +A +
Sbjct: 217 DAAKLKDLRTREIKNGRLAMLAVLGAIVQANYTHTGPIDNLVAHLVDPGHNTIFALS 273
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.141 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,370,026,860
Number of Sequences: 23463169
Number of extensions: 200053189
Number of successful extensions: 370098
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 363733
Number of HSP's gapped (non-prelim): 2772
length of query: 229
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 91
effective length of database: 9,121,278,045
effective search space: 830036302095
effective search space used: 830036302095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)