BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026996
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC227.14 PE=3 SV=1
Length = 235
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 93/152 (61%), Gaps = 14/152 (9%)
Query: 79 EARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYL 138
+ R ++GLAG PG+GKSTL A + K W ++ S ++ ++PMDGFH L
Sbjct: 27 QQRVLIGLAGGPGSGKSTLCAILA----KAWNERFGS--------EIVKIIPMDGFHYSL 74
Query: 139 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR--NQGSVYAPSFDHGVGDPVEDDIL 196
+LD ++P++A A RGA WTF+ L + ++ ++ +YAPSFDH +GDPV DDI
Sbjct: 75 EELDRFDNPEKARALRGAEWTFDADLFYSLVRLMKKITDRELYAPSFDHAIGDPVVDDIC 134
Query: 197 VGLQHKVVIVDGNYLFLDGGVWKDVSSMFDEK 228
V +++++I +GNYL L+ W D ++D K
Sbjct: 135 VEPKNRILIFEGNYLLLNKPPWSDACKLYDIK 166
>sp|C5DNG5|YFH7_LACTC ATP-dependent kinase YFH7 OS=Lachancea thermotolerans (strain ATCC
56472 / CBS 6340 / NRRL Y-8284) GN=YFH7 PE=3 SV=1
Length = 347
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 46/176 (26%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
+VG+ G P + R+ + P + S+ D ++ A ++PMDGFHL LD
Sbjct: 120 VVGIGGLPNS----------IRVENVAPLEPSNHDYKI-----AKIVPMDGFHLSRRHLD 164
Query: 143 AMEDPKEAHARRGAPWTFN--------PLLLLNCL--------KNLRNQG---------- 176
+DP EAH RRG+P TF+ LL C K + G
Sbjct: 165 HFDDPVEAHRRRGSPPTFDSNNCLQLCKLLAKTCTIKPTLPVNKTTADTGTLFDKISDTF 224
Query: 177 -----SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFDE 227
S+Y P FDH + DP V ++++++G YL LD W+D+ F +
Sbjct: 225 SESVPSIYVPGFDHALKDPSTGQHCVDAFTRIIVLEGLYLLLDEDNWRDIYPTFKD 280
>sp|P11664|YGGC_ECOLI Uncharacterized protein YggC OS=Escherichia coli (strain K12)
GN=yggC PE=4 SV=2
Length = 237
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 75/150 (50%), Gaps = 23/150 (15%)
Query: 79 EARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYL 138
+ R +V L PPG GKSTL W A D ++ P + T LPMDGFH Y
Sbjct: 41 QRRTVVFLCAPPGTGKSTLTT--------FWEYLAQQ-DPEL--PAIQT-LPMDGFHHYN 88
Query: 139 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN--QGSVYAPSFDHGVGDPVEDDIL 196
S LDA + +GAP TF+ + +NLR +G P +D DPVED +
Sbjct: 89 SWLDA----HQLRPFKGAPETFD---VAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALH 141
Query: 197 VGLQHKVVIVDGNYLFLDGGVWKDVSSMFD 226
V +VIV+GN+L LD W +++S D
Sbjct: 142 VTA--PLVIVEGNWLLLDDEKWLELASFCD 169
>sp|P43591|YFH7_YEAST ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YFH7 PE=1 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|A7A245|YFH7_YEAS7 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|B5VI33|YFH7_YEAS6 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|B3LUL5|YFH7_YEAS1 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|C7GYB3|YFH7_YEAS2 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
JAY291) GN=YFH7 PE=3 SV=1
Length = 353
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQKIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|C5DXG0|YFH7_ZYGRC ATP-dependent kinase YFH7 OS=Zygosaccharomyces rouxii (strain ATCC
2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=YFH7 PE=3 SV=1
Length = 375
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 43/169 (25%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
I+G G P A + N + P + SSF A ++PMDGFHL L
Sbjct: 156 QILGRGGLPNAFTIS---------NDVEPDEESSF---------AQIVPMDGFHLSRQCL 197
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGS------------------------ 177
+ ++P+EAH RRG+P TF+ K L +
Sbjct: 198 SSFQNPQEAHKRRGSPPTFDSNNFAQLCKTLAQTCTIKPGSCDAKSCFEFMAKTYDPHFP 257
Query: 178 -VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMF 225
+ P FDH + DP D + ++VI++G YL D W+ V +
Sbjct: 258 CIKIPGFDHSLKDPTPDQFCLNGHTRIVILEGLYLLYDKENWQRVHEIL 306
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 81 RHIVGLAGPPGAGKSTLAAEVVRRIN 106
R + + GPPG+GKST+A ++ R+IN
Sbjct: 59 RVCILIVGPPGSGKSTVAQDLSRQIN 84
>sp|C8Z7U0|YFH7_YEAS8 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=YFH7 PE=3 SV=1
Length = 353
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 29/127 (22%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG------- 176
++A ++PMDGFHL LD +DP+ AH RRG+P TF+ L K L
Sbjct: 154 NIAQIVPMDGFHLSRRCLDLFKDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSH 213
Query: 177 ----------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
++ P F+H + DP D + ++VI++G YL D
Sbjct: 214 HKFYSTSSVFEKLSKTFSQTIPDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYD 273
Query: 215 GGVWKDV 221
WK +
Sbjct: 274 QENWKKI 280
>sp|Q750K6|YFH7_ASHGO ATP-dependent kinase YFH7 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YFH7 PE=3 SV=1
Length = 334
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 56/124 (45%), Gaps = 27/124 (21%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------R 173
++A V+PMDGFHL + LD D AH RRGAPWTF+ L K L R
Sbjct: 139 NIAEVVPMDGFHLSRAHLDHFADAAAAHKRRGAPWTFDSNNYLQLCKLLAATCKWKPAKR 198
Query: 174 NQGS---------------VYAPSFDHGVGDPVEDD-ILVGLQHKVVIVDGNYLFLDGGV 217
+G + P FDH DPV D +L G +V+I DG YL D
Sbjct: 199 PKGETLMETICDTFAQCPVISYPGFDHAAKDPVRDQHVLTGFT-RVLIFDGLYLLYDQEN 257
Query: 218 WKDV 221
W +
Sbjct: 258 WAHI 261
>sp|A7TQF3|YFH7_VANPO ATP-dependent kinase YFH7 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=YFH7 PE=3 SV=1
Length = 359
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 33/135 (24%)
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL----------- 172
++A ++PMDGFHL LD +DP AH RRG+P TF+ L K L
Sbjct: 156 NIAQIIPMDGFHLTRKCLDNFKDPVNAHRRRGSPSTFDSNNFLQLCKLLAETSNTKIPLS 215
Query: 173 RNQGS----------------------VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNY 210
R Q S +Y P FDH + DP + + +++I +G Y
Sbjct: 216 RFQNSDNDDVDAVWEKLAKTFTSDVQDIYIPGFDHSLKDPTSNQYCINGFTRIMIFEGLY 275
Query: 211 LFLDGGVWKDVSSMF 225
L D W + +
Sbjct: 276 LLYDQENWSKIYQVL 290
Score = 38.5 bits (88), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 86 LAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMD 132
+ GPPG+GKST+A E+ R+N ++ + ++ V+ LP+D
Sbjct: 29 IVGPPGSGKSTIANELCERLNSMFHEYLKEHGGNIEISGVSEPLPVD 75
>sp|Q6CNA8|YFH7_KLULA ATP-dependent kinase YFH7 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YFH7 PE=3 SV=1
Length = 353
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 34/105 (32%)
Query: 123 PDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLK------------ 170
PD+A ++PMDGFHL LD +DP AH RRG+P+TF+ L K
Sbjct: 143 PDIAQIVPMDGFHLSRKHLDHFKDPTVAHLRRGSPFTFDSNNFLQLCKVLSKTCSLDPNY 202
Query: 171 --------NLRNQGSVYA--------------PSFDHGVGDPVED 193
N N S++ P FDH + DPV D
Sbjct: 203 HSTGPETVNEDNTNSLFDNVTNSFIDLPEISFPGFDHAIKDPVAD 247
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 81 RHIVGLAGPPGAGKSTLAAEVVRRINKIW 109
R +G+ GPPG+GKST+A ++ +IN +
Sbjct: 24 RVCIGIIGPPGSGKSTVAEKLKEKINSRY 52
>sp|Q6FUM2|YFH7_CANGA ATP-dependent kinase YFH7 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YFH7 PE=3
SV=1
Length = 345
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 28/128 (21%)
Query: 125 VATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG-------- 176
+A VLPMDGFHL LD DP+ AH RRG+ TF+ L + +
Sbjct: 148 IAEVLPMDGFHLSRECLDHFSDPQWAHLRRGSSLTFDSNNFLKLCEIMAKTSRIFPSIGY 207
Query: 177 --------------------SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGG 216
SV P FDH + DP + + ++VI +G YL +
Sbjct: 208 DGDDFTAFDAISSSFDCSVPSVEVPGFDHSLKDPQPSQHTISFKSRIVIFEGLYLLYNKE 267
Query: 217 VWKDVSSM 224
W + ++
Sbjct: 268 NWSKIYNI 275
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 61 NKTSLKVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQV 120
N+ +V+ S R EI R +V + GPPG+GKST+A ++ IN +S+ +
Sbjct: 5 NRLKEEVIASYR-EICKENYRLLVFIVGPPGSGKSTIAEKLKDAIN-------TSYLDYL 56
Query: 121 KPPDVATVLPMDGFHLYLSQL 141
K D T+ + H+ + Q
Sbjct: 57 KEIDRKTLRCENYNHINIDQF 77
>sp|A1SF33|COAA_NOCSJ Pantothenate kinase OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=coaA PE=3 SV=1
Length = 329
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
++GLAG GKST A V++ + WPQ P+VA V DGF ++L+
Sbjct: 102 VIGLAGSVAVGKST-TARVLQEMLAHWPQH----------PNVALVT-TDGFLYPNAELE 149
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 201
+ R+G P +++ LL + ++++ + V AP++ H V D V D+ +V +
Sbjct: 150 R----RGLLERKGFPESYDRRALLKFVVDIKSGKDEVLAPTYSHLVYDVVPDEKVVIRRP 205
Query: 202 KVVIVDG 208
+VIV+G
Sbjct: 206 DIVIVEG 212
>sp|Q38ZE2|COAA_LACSS Pantothenate kinase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=coaA PE=3 SV=1
Length = 309
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 34/163 (20%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G+AG GKST A + +++++P K ++ DGF S+L
Sbjct: 87 IIGIAGSVAVGKSTTARLLQLLLSRVYPDKT------------VQMITTDGFLYSTSELK 134
Query: 143 AMEDPKEAHARRGAPWTFN-PLLL--LNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGL 199
K ++G P +++ P L+ LN +KN N V AP + H + D + D+ +
Sbjct: 135 Q----KGILDKKGFPESYDMPQLISFLNAVKN--NVAPVKAPKYSHQIYDIIPDEFDIID 188
Query: 200 QHKVVIVDG-NYL------------FLDGGVWKDVSSMFDEKW 229
++IV+G N L F D V+ D + EKW
Sbjct: 189 DPDILIVEGINVLQLPTTEQIYVSDFFDFSVYVDANPSLIEKW 231
>sp|B2GEA0|COAA_LACF3 Pantothenate kinase OS=Lactobacillus fermentum (strain NBRC 3956 /
LMG 18251) GN=coaA PE=3 SV=1
Length = 307
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 35/179 (19%)
Query: 65 LKVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPD 124
+ L R IP +I+G+AG GKST A + + ++ P +
Sbjct: 72 MTFLRKSSRRIP-----YIIGIAGSVAVGKSTTARLLQILLKRLMPDRR----------- 115
Query: 125 VATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSF 183
++ DGF LY + A + AR+G P +++ LL + ++ + V AP++
Sbjct: 116 -IEMITTDGF-LYPN---AELKRRGIMARKGFPESYDMDRLLTFMNDVNAGEDQVTAPTY 170
Query: 184 DHGVGDPVEDDILVGLQHKVVIVDG-NYL------------FLDGGVWKDVSSMFDEKW 229
H V D +ED + ++IV+G N L F D V+ D + EKW
Sbjct: 171 SHSVYDVMEDHPQTIYKPDILIVEGINVLQLPTTQRLFVSDFFDFSVYVDADASLVEKW 229
>sp|Q1WRY7|COAA_LACS1 Pantothenate kinase OS=Lactobacillus salivarius (strain UCC118)
GN=coaA PE=3 SV=1
Length = 306
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 37/164 (22%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY----L 138
I+G+AG GKST A + +++++P K ++ DGF LY L
Sbjct: 85 ILGIAGSVAVGKSTTARLLQSLLSEVYPDKK------------VQLITTDGF-LYPNQEL 131
Query: 139 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVG 198
+ + ME R+G P +++ LL + +++N AP + H V D V+ +
Sbjct: 132 KRRNLME-------RKGFPESYDMRRLLRFVNDVKNNLPAKAPVYSHKVYDIVKGQYEIV 184
Query: 199 LQHKVVIVDG-NYL------------FLDGGVWKDVSSMFDEKW 229
++IV+G N L F D ++ D E+W
Sbjct: 185 ESPDILIVEGINVLQLPTNQQIYVSDFFDFSIYVDAEESLIEEW 228
>sp|P09559|KPPR_SPIOL Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1
Length = 402
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 29 LPSGHHGFLSFSWIRRNANAQPVFGKTRSLVQNKT------SLKVLCSQRREIPVVEARH 82
+P+ H SF+ N Q F RS N T S + CSQ++ I
Sbjct: 9 IPTTTHLGSSFN----QNNKQVFFNYKRSSSSNNTLFTTRPSYVITCSQQQTI------- 57
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIW-----PQKASSFDSQVKPPDVATVLPMDGFHLY 137
++GLA G GKST +RR+ ++ P K + DS D TV+ +D FH
Sbjct: 58 VIGLAADSGCGKSTF----MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFH-- 111
Query: 138 LSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDH--GVGDPVEDDI 195
LD K P + L+ +K L+ +V P ++H G+ DP E
Sbjct: 112 --SLDR-NGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDPPE--- 165
Query: 196 LVGLQHKVVIVDGNY--------LFLDGGVWKDVSSMFDEKW 229
+ K+++++G + LD ++ D+S+ W
Sbjct: 166 -LIQPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAW 206
>sp|P54556|COAA_BACSU Pantothenate kinase OS=Bacillus subtilis (strain 168) GN=coaA PE=3
SV=2
Length = 319
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G+AG GKST A +++++ P + P V +++ DGF ++L
Sbjct: 91 IIGIAGSVAVGKST-TARILQKLLSRLPDR----------PKV-SLITTDGFLFPTAELK 138
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 201
K +R+G P +++ LL L +L++ + SV AP + H D E V Q
Sbjct: 139 K----KNMMSRKGFPESYDVKALLEFLNDLKSGKDSVKAPVYSHLTYDREEGVFEVVEQA 194
Query: 202 KVVIVDG 208
+VI++G
Sbjct: 195 DIVIIEG 201
>sp|B2G996|COAA_LACRJ Pantothenate kinase OS=Lactobacillus reuteri (strain JCM 1112)
GN=coaA PE=3 SV=1
Length = 307
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST+A + +NK+ P K ++ DGF ++L
Sbjct: 84 YIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFLYPNAEL 131
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQ 200
+ R+G P +++ LL L +++ + V AP++ H V D D LV
Sbjct: 132 KR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDKPLVIDS 187
Query: 201 HKVVIVDG-NYLFLDGGVWKDVSSMFD 226
++IV+G N L L VS FD
Sbjct: 188 PDILIVEGINTLQLPSNQQLYVSDYFD 214
>sp|A5VLY5|COAA_LACRD Pantothenate kinase OS=Lactobacillus reuteri (strain DSM 20016)
GN=coaA PE=3 SV=1
Length = 307
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 18/147 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST+A + +NK+ P K ++ DGF ++L
Sbjct: 84 YIIGIAGSVAVGKSTIARLISILLNKMLPDKR------------VELMTTDGFLYPNAEL 131
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQ 200
+ R+G P +++ LL L +++ + V AP++ H V D D LV
Sbjct: 132 KR----RGIMDRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDKPLVIDS 187
Query: 201 HKVVIVDG-NYLFLDGGVWKDVSSMFD 226
++IV+G N L L VS FD
Sbjct: 188 PDILIVEGINTLQLPSNQQLYVSDYFD 214
>sp|O86779|COAA_STRCO Pantothenate kinase OS=Streptomyces coelicolor (strain ATCC BAA-471
/ A3(2) / M145) GN=coaA PE=3 SV=1
Length = 329
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
++G+AG GKST+A +++ + WP+ P V V DGF L +L+
Sbjct: 102 VIGVAGSVAVGKSTVA-RLLQALLSRWPEH----------PRVELVT-TDGFLLPTRELE 149
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 201
A + +R+G P +++ L + +++ + V AP + H + D V D LV +
Sbjct: 150 A----RGLMSRKGFPESYDRRALTRFVADIKAGKAEVTAPVYSHLIYDIVPDQRLVVRRP 205
Query: 202 KVVIVDG 208
++IV+G
Sbjct: 206 DILIVEG 212
>sp|B3W953|COAA_LACCB Pantothenate kinase OS=Lactobacillus casei (strain BL23) GN=coaA
PE=3 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G+AG GKST A + +++ +P+K + DGF LY +
Sbjct: 86 IIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTDGF-LY---PN 129
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 201
A + + R+G P +++ LL++ + N++N G++ AP + H + D V + + +
Sbjct: 130 AELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIVPGEYELIDRP 189
Query: 202 KVVIVDG 208
++IV+G
Sbjct: 190 DILIVEG 196
>sp|Q036Y4|COAA_LACC3 Pantothenate kinase OS=Lactobacillus casei (strain ATCC 334)
GN=coaA PE=3 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G+AG GKST A + +++ +P+K + DGF LY +
Sbjct: 86 IIGIAGSVAVGKSTTARLLQLLLSRAYPEKR------------VQQMTTDGF-LY---PN 129
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 201
A + + R+G P +++ LL++ + N++N G++ AP + H + D V + + +
Sbjct: 130 AELERRGILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIVPGEYELIDRP 189
Query: 202 KVVIVDG 208
++IV+G
Sbjct: 190 DILIVEG 196
>sp|Q839J7|COAA_ENTFA Pantothenate kinase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=coaA PE=3 SV=1
Length = 307
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 30/161 (18%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G+AG GKST A + R + + + ++ ++ DGF LY +++
Sbjct: 85 IIGIAGSVAVGKSTTARLLQRILARTFKRRN------------VQLITTDGF-LYPNKV- 130
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQH 201
+E+ + R+G P +++ L+N L +++ + + AP + H V D +E + + Q
Sbjct: 131 -LEE-QGIMDRKGFPESYDMEKLINFLNEVKSGKDEIKAPVYSHSVYDVIEGEYELIQQP 188
Query: 202 KVVIVDG-NYL------------FLDGGVWKDVSSMFDEKW 229
++IV+G N L F D ++ D EKW
Sbjct: 189 DILIVEGINTLQLPANQQIYVSDFFDFSIFVDADPALIEKW 229
>sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 404
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 43/210 (20%)
Query: 40 SWIRRNANAQPVFGKTRSLVQNKT-----SLKVLCSQRREIPVVEARHIVGLAGPPGAGK 94
S R+N Q +F TRS ++ T + +V C+ VE ++GLA G GK
Sbjct: 22 SGFRQN---QVIFFTTRSSRRSNTRHGARTFQVSCA-------VEQPIVIGLAADSGCGK 71
Query: 95 STLAAEVVRRINKIW-----PQKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKE 149
ST +RR+ ++ P K + DS D TV+ +D +H LD KE
Sbjct: 72 STF----MRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYH----SLDRT-GRKE 122
Query: 150 AHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDH--GVGDPVEDDILVGLQHKVVIVD 207
P + L+ +K ++ ++ P ++H G+ DP E + K+ +++
Sbjct: 123 KGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPAE----LIQPPKIFVIE 178
Query: 208 GNY--------LFLDGGVWKDVSSMFDEKW 229
G + LD ++ D+S+ W
Sbjct: 179 GLHPMYDERVRELLDFSIYLDISNEVKFAW 208
>sp|B4YNE3|V3_SPTNK Uncharacterized protein V3 OS=Sputnik virophage GN=ORF3 PE=4 SV=1
Length = 245
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 81 RHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVL-----PMDGFH 135
R ++ +AG G+GKST AA+ + K++P+ S++K ++ L P+D
Sbjct: 56 REVIYIAGQSGSGKSTYAAQYIYHYKKLFPKNKVFVFSRLKMAEILVSLGCIEIPIDD-- 113
Query: 136 LYLSQLDAMEDPKEA 150
L +DA+ D K+A
Sbjct: 114 -ELQDMDAIRDIKDA 127
>sp|A8AX56|COAA_STRGC Pantothenate kinase OS=Streptococcus gordonii (strain Challis /
ATCC 35105 / CH1 / DL1 / V288) GN=coaA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 37/164 (22%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLY----L 138
I+G++G GKST + R+ +I + +++V+ ++ DGF LY L
Sbjct: 86 IIGVSGSVAVGKSTTS-----RLLQILLSRTFE-NAKVE------LVTTDGF-LYPNSVL 132
Query: 139 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVG 198
+ D + R+G P ++N LLLN L +L+N + P + H + D V D
Sbjct: 133 QEHDLLN-------RKGFPESYNMELLLNFLDHLKNGQNYQVPVYSHEIYDIVPDQTQTI 185
Query: 199 LQHKVVIVDGN-----------YL--FLDGGVWKDVSSMFDEKW 229
VIV+G Y+ F D ++ D EKW
Sbjct: 186 QVADFVIVEGINVFQNPQNERLYITDFFDFSIYVDAEVENIEKW 229
>sp|A1R8P8|COAA_ARTAT Pantothenate kinase OS=Arthrobacter aurescens (strain TC1) GN=coaA
PE=3 SV=1
Length = 323
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 39/168 (23%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
++G+AG GKST+ A V+R + + WP P+V ++ DGF L++L
Sbjct: 96 VIGVAGSVAVGKSTI-ARVLREMLRRWP----------GTPNVE-LITTDGFLYPLAEL- 142
Query: 143 AMEDPKEAH--ARRGAPWTFNPLLLLNCLKNLRNQG-SVYAPSFDHGVGDPVEDDILVGL 199
K H R+G P +++ LL + ++ V AP + H D V +V
Sbjct: 143 -----KRRHLLERKGFPESYDRRGLLRFVSEVKGGAEEVRAPWYSHVTYDIVPGKEVVVR 197
Query: 200 QHKVVIVDG-NYL-----------------FLDGGVWKDVSSMFDEKW 229
+ V+IV+G N L F D ++ D + + E+W
Sbjct: 198 RPDVLIVEGLNVLAPARPRMDGKQGLAVSDFFDFSIYVDAKTSYIEEW 245
>sp|B9JXX1|COAA_AGRVS Pantothenate kinase OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=coaA PE=3 SV=1
Length = 330
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 55 TRSLVQNKTSLKVLCSQRREI---PVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQ 111
+R L + S ++L QR V + I+G+AG GKST A V++ + WP
Sbjct: 72 SRLLSSHVESSQLLFEQRNRFLSTNVTKTPFIIGIAGSVAVGKST-TARVLKELLARWPS 130
Query: 112 KASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKN 171
P V V DGF LY S + D K R+G P +++ LL L
Sbjct: 131 S----------PKVDLV-TTDGF-LY-SNATLVRDNK--LNRKGFPESYDTAALLRFLSA 175
Query: 172 LR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLF------LDGGVWKDVSSM 224
++ Q +V AP + H D + D + + ++I +G + DG + VS
Sbjct: 176 IKAGQQNVKAPRYSHLTYDVLPDQHTIIDRPDILIFEGINVLQSRDLPRDGKIVPMVSDF 235
Query: 225 FD 226
FD
Sbjct: 236 FD 237
>sp|P25697|KPPR_ARATH Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana
GN=At1g32060 PE=1 SV=1
Length = 395
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 75 IPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIW-----PQKASSFDSQVKPPDVATVL 129
I + ++GLA G GKST +RR+ ++ P K + DS D TV+
Sbjct: 44 ITCAQETIVIGLAADSGCGKSTF----MRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVI 99
Query: 130 PMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDH--GV 187
+D +H LD KE P + L+ +K L+N +V P ++H G+
Sbjct: 100 CLDDYH----SLDRY-GRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGL 154
Query: 188 GDPVEDDILVGLQHKVVIVDGNY-LF-------LDGGVWKDVSSMFDEKW 229
DP E + K+++++G + +F LD ++ D+S+ W
Sbjct: 155 LDPPE----LIQPPKILVIEGLHPMFDERVRDLLDFSIYLDISNEVKFAW 200
>sp|C0Z7P4|COAA_BREBN Pantothenate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 /
NBRC 100599) GN=coaA PE=3 SV=1
Length = 320
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 53 GKTRSLVQNKTSLKVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQK 112
G T+ L Q + L +Q ++P I+G+AG GKST A +++ + WP
Sbjct: 68 GGTQELYQATHTF--LGNQDGKVPF-----IIGIAGSVAVGKST-TARILQTLLSRWPNH 119
Query: 113 ASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNL 172
P V V DGF LY +++ +ED + R+G P +++ +N L ++
Sbjct: 120 ----------PKVDLV-TTDGF-LYPNKV--LED-RGIMKRKGFPESYDLRRFINFLSDV 164
Query: 173 RN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
++ V AP + H V D V D+ Q ++IV+G
Sbjct: 165 KSGLPEVKAPVYSHLVYDIVPDEWQTVRQPDILIVEG 201
>sp|Q5M4T8|COAA_STRT2 Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 202
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 203 VVIVDGNYLFLDG 215
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q5M079|COAA_STRT1 Pantothenate kinase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 202
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 203 VVIVDGNYLFLDG 215
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|B5ZV89|COAA_RHILW Pantothenate kinase OS=Rhizobium leguminosarum bv. trifolii (strain
WSM2304) GN=coaA PE=3 SV=1
Length = 331
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 21/159 (13%)
Query: 55 TRSLVQNKTSLKVLCSQRREI----PVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWP 110
+R L + S ++L QR V + ++G+AG GKST A V++ + WP
Sbjct: 72 SRLLSAHVESSQMLFEQRNRFLSLSDVTKTPFVIGIAGSVAVGKST-TARVLKELLGRWP 130
Query: 111 QKASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLK 170
P V V DGF +A+ ++ R+G P +++ +L L
Sbjct: 131 SS----------PKVDLV-TTDGF----LHPNAVLQREKLMQRKGFPESYDTAAILRFLS 175
Query: 171 NLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
++ Q V APS+ H V D + D+ + + ++I +G
Sbjct: 176 AIKAGQPDVKAPSYSHLVYDVLPDEYKIVDRPDILIFEG 214
>sp|Q5WEY6|COAA_BACSK Pantothenate kinase OS=Bacillus clausii (strain KSM-K16) GN=coaA
PE=3 SV=1
Length = 316
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 66 KVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDV 125
+ L +R+ +P V +G+AG GKST A +++ + WP P V
Sbjct: 79 RFLKRERKRVPFV-----IGIAGSVAVGKST-TARLIQALASRWP----------GSPKV 122
Query: 126 ATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFD 184
V DGF LY +++ + + R+G P +++ LL L +L+ V AP +
Sbjct: 123 ELV-TTDGF-LYPNEV---LEKRGLMKRKGFPESYDIRSLLTFLTDLKAGTPVVKAPMYS 177
Query: 185 HGVGDPVEDDILVGLQHKVVIVDG 208
H + +D I ++ VVIV+G
Sbjct: 178 HLTYNIEKDHIQTLIEPDVVIVEG 201
>sp|Q03L30|COAA_STRTD Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=coaA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+G++G GKST + + + + +P+ D+ T DGF L+ +Q+
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKV---------DMVTT---DGF-LFPNQVL 132
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHK 202
K R+G P +++ LLLN L ++N G V P + H + DI+ GL K
Sbjct: 133 I---DKGILNRKGFPESYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK 184
Query: 203 VVIVDGNYLFLDG 215
I N+L ++G
Sbjct: 185 --ISQPNFLIVEG 195
>sp|Q21CJ9|COAA_RHOPB Pantothenate kinase OS=Rhodopseudomonas palustris (strain BisB18)
GN=coaA PE=3 SV=1
Length = 317
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 66 KVLCSQRREIPVVEAR--HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPP 123
++ +QRR + +V+ + +I+G+AG GKST A V++ + W P
Sbjct: 71 QLYFAQRRFLGIVDRKMPYIIGVAGSVAVGKST-TARVLQALLARW-----------SPR 118
Query: 124 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPS 182
++ DGF LY +AM + + ++G P +++ LL L +++ + V AP
Sbjct: 119 PKVDLITTDGF-LY---SNAMLERQGMMQKKGFPESYDLPRLLAFLSDIKAGRRRVRAPI 174
Query: 183 FDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKD------VSSMFD 226
+ H D V ++ + + ++IV+G + G + +D VS FD
Sbjct: 175 YSHLTYDIVPNEYVTVDRPDILIVEGVNVLQTGRLPRDGKAVPVVSDFFD 224
>sp|Q2NWS4|COAA_SODGM Pantothenate kinase OS=Sodalis glossinidius (strain morsitans)
GN=coaA PE=3 SV=1
Length = 316
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGF---HLYL 138
+I+G+AG GKST A V++ + WP+ + ++ DGF + L
Sbjct: 89 YIIGIAGSVAVGKST-TARVLQALLSRWPEHRT-----------VELVTTDGFLHPNSVL 136
Query: 139 SQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILV 197
Q D M+ ++G P +++ L+N + +++ V AP + H + D V D+ V
Sbjct: 137 KQRDLMK-------KKGFPESYDIRSLVNFVSKVKSGTPRVTAPVYSHLIYDVVPDEQKV 189
Query: 198 GLQHKVVIVDG 208
Q ++I++G
Sbjct: 190 ISQPDILILEG 200
>sp|O58012|Y274_PYRHO Putative GTPase PH0274 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0274
PE=3 SV=1
Length = 317
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 54 KTRSLVQNKTSLKVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVR 103
K +LV+N S K ++ P+ HIVG+ GPPGAGKSTL ++++
Sbjct: 21 KLITLVENDES-KAKVIIKKIYPLTGNAHIVGITGPPGAGKSTLLDKLIK 69
>sp|Q7VPK9|COAA_HAEDU Pantothenate kinase OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=coaA PE=3 SV=1
Length = 316
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+ LAG GKST +A +++ + WP + + D+ T DGF L+ L
Sbjct: 89 YIISLAGSVSVGKST-SARILQALLCQWPVE--------RKVDLITT---DGFLYPLAIL 136
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
A K R+G P +++ L+ + +L++ + ++ AP + H D + D V Q
Sbjct: 137 QA----KNLLNRKGFPESYDIHRLIKFVSDLKSGERNIKAPIYSHLTYDIIPDRYSVVDQ 192
Query: 201 HKVVIVDG 208
++VI++G
Sbjct: 193 PEIVILEG 200
>sp|A9NAJ3|COAA_COXBR Pantothenate kinase OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=coaA PE=3 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST + V++ + WP P+V V+ DGF LY
Sbjct: 90 YIIGIAGSVAVGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---S 133
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
+A + + R+G P +++ LL L +++ Q +V P + H D V + Q
Sbjct: 134 NAKLEKQGLMKRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQ 193
Query: 201 HKVVIVDGNYLFLDGGVWKDVSSM 224
+VI++G + L GV K + +
Sbjct: 194 PDIVILEGLNI-LQTGVRKTLQQL 216
>sp|B6J2J7|COAA_COXB2 Pantothenate kinase OS=Coxiella burnetii (strain CbuG_Q212) GN=coaA
PE=3 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST + V++ + WP P+V V+ DGF LY
Sbjct: 90 YIIGIAGSVAVGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---S 133
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
+A + + R+G P +++ LL L +++ Q +V P + H D V + Q
Sbjct: 134 NAKLEKQGLMKRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQ 193
Query: 201 HKVVIVDGNYLFLDGGVWKDVSSM 224
+VI++G + L GV K + +
Sbjct: 194 PDIVILEGLNI-LQTGVRKTLQQL 216
>sp|B6J596|COAA_COXB1 Pantothenate kinase OS=Coxiella burnetii (strain CbuK_Q154) GN=coaA
PE=3 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST + V++ + WP P+V V+ DGF LY
Sbjct: 90 YIIGIAGSVAVGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---S 133
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
+A + + R+G P +++ LL L +++ Q +V P + H D V + Q
Sbjct: 134 NAKLEKQGLMKRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQ 193
Query: 201 HKVVIVDGNYLFLDGGVWKDVSSM 224
+VI++G + L GV K + +
Sbjct: 194 PDIVILEGLNI-LQTGVRKTLQQL 216
>sp|B9JG63|COAA_AGRRK Pantothenate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC
BAA-868) GN=coaA PE=3 SV=1
Length = 331
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 27/174 (15%)
Query: 64 SLKVLCSQRREI----PVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQ 119
S ++L QR V + ++G+AG GKST A +++ + + WP
Sbjct: 81 SSQILFEQRNRFLSLNGVAKTPFVIGIAGSVAVGKST-TARILKELLRRWPSS------- 132
Query: 120 VKPPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSV 178
P V ++ DGF ++L + R+G P +++ LL L ++ Q V
Sbjct: 133 ---PKV-DLITTDGFLYPNAELQR----RNLMQRKGFPESYDTAALLRFLSAIKAGQPDV 184
Query: 179 YAPSFDHGVGDPVEDDILVGLQHKVVIVDG------NYLFLDGGVWKDVSSMFD 226
AP + H V D + + + ++I +G +L DG + VS FD
Sbjct: 185 KAPCYSHLVYDVLPSEYKTVDRPDILIFEGINVLQSRHLPADGKIVPMVSDFFD 238
>sp|Q83EV9|COAA_COXBU Pantothenate kinase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=coaA PE=1 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST + V++ + WP P+V V+ DGF LY
Sbjct: 90 YIIGIAGSVAVGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---S 133
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
+A + + R+G P +++ LL L +++ Q +V P + H D V + Q
Sbjct: 134 NAKLEKQGLMKRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQ 193
Query: 201 HKVVIVDGNYLFLDGGVWKDVSSM 224
+VI++G + L GV K + +
Sbjct: 194 PDIVILEGLNI-LQTGVRKTLQQL 216
>sp|A9KD67|COAA_COXBN Pantothenate kinase OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=coaA PE=3 SV=1
Length = 318
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 82 HIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQL 141
+I+G+AG GKST + V++ + WP P+V V+ DGF LY
Sbjct: 90 YIIGIAGSVAVGKST-TSRVLKALLSRWPDH----------PNVE-VITTDGF-LY---S 133
Query: 142 DAMEDPKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQ 200
+A + + R+G P +++ LL L +++ Q +V P + H D V + Q
Sbjct: 134 NAKLEKQGLMKRKGFPESYDMPSLLRVLNAIKSGQRNVRIPVYSHHYYDIVRGQYEIVDQ 193
Query: 201 HKVVIVDGNYLFLDGGVWKDVSSM 224
+VI++G + L GV K + +
Sbjct: 194 PDIVILEGLNI-LQTGVRKTLQQL 216
>sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=coaA PE=3
SV=1
Length = 316
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 83 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKPPDVATVLPMDGFHLYLSQLD 142
I+GLAG GKST A +++++ K WP+ D+ T DGF L+
Sbjct: 90 IIGLAGSVAVGKST-TARLLQKLLKAWPEHHHV--------DLVTT---DGFLYPNETLE 137
Query: 143 AMEDPKEAHARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQH 201
A + ++G P +++ L+ L +++ + V AP + H + VE D V +
Sbjct: 138 A----RGLMDKKGFPESYDLPALIRFLSDVKAGEPYVKAPVYSHLTYNIVEGDYQVVHEP 193
Query: 202 KVVIVDG 208
+VIV+G
Sbjct: 194 DIVIVEG 200
>sp|Q03PP4|COAA_LACBA Pantothenate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=coaA PE=3 SV=1
Length = 307
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 41/194 (21%)
Query: 52 FGKTRSLVQNKTSLKVLCSQRREIPVVEARHIVGLAGPPGAGKSTLAAEVVRRINKIWPQ 111
F R L ++K + QR +P I+G+AG GKST A + +N +
Sbjct: 61 FDHYRQLQRDKATFLKQPQQR--VPF-----IIGIAGSVAVGKSTAARLLEVLLNHYFT- 112
Query: 112 KASSFDSQVKPPDVATVLPMDGFHLYLSQLDAMEDPKEAH--ARRGAPWTFNPLLLLNCL 169
D +++ ++ DGF L + E+ K+ + AR+G P +++ L+ L
Sbjct: 113 -----DQRIQ------LITTDGF------LYSNEELKKRNLMARKGFPESYDMTALIQFL 155
Query: 170 KNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-NYL------------FLDG 215
+++ + + AP + H V D V D + V+IV+G N L F D
Sbjct: 156 NDVKAGKELIKAPVYSHKVYDIVPDQFDYIMHPDVLIVEGINTLQLPTNEQIYVSDFTDF 215
Query: 216 GVWKDVSSMFDEKW 229
++ D E W
Sbjct: 216 SIYVDADPTLIESW 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,102,667
Number of Sequences: 539616
Number of extensions: 3886351
Number of successful extensions: 23458
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 23282
Number of HSP's gapped (non-prelim): 421
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)