BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026998
(229 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF++++
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMM 364
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 365 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 406
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 407 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFP---KIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + + A+G F ++ K DS + F FD+D NG
Sbjct: 331 LGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNG 390
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 391 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 438
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D +G ++F EFL
Sbjct: 306 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMA 365
Query: 212 R 212
R
Sbjct: 366 R 366
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K +F+ D D++GTI +ELK ++ + E EI DL +A DI+K + + EFI
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA- 70
Query: 119 LCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESG 178
V+L KLE E LV AF + DK+ GY++ E+ QA + G
Sbjct: 71 -ATVHL----------------NKLERE-ENLVSAFSYFDKDGSGYITLDEIQQACKDFG 112
Query: 179 EGSTGRIAIKR-FEEMDWDKNGMVNFKEF 206
I I +E+D D +G +++ EF
Sbjct: 113 ---LDDIHIDDMIKEIDQDNDGQIDYGEF 138
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 373 ARKMKYTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 414
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 415 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + + A+G F +++ + K DS + F FD+D NG
Sbjct: 339 LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNG 398
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 399 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 125 LKDDPTALRAKSRMGMPK--LEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGST 182
K+D L K +P E +AF DK+ DG ++ E+ + G+ T
Sbjct: 285 FKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT 344
Query: 183 GRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
E+D D +G ++F EFL R
Sbjct: 345 EAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 373 ARKMKYTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 414
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 415 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + + A+G F +++ + K DS + F FD+D NG
Sbjct: 339 LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNG 398
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 399 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 125 LKDDPTALRAKSRMGMPK--LEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGST 182
K+D L K +P E +AF DK+ DG ++ E+ + G+ T
Sbjct: 285 FKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT 344
Query: 183 GRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
E+D D +G ++F EFL R
Sbjct: 345 EAELQDMINEVDADGDGTIDFPEFLTMMAR 374
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 374 ARKMKYTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 416 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + + A+G F +++ + K DS + F FD+D NG
Sbjct: 340 LGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNG 399
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 400 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D +G ++F EFL
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 374
Query: 212 R 212
R
Sbjct: 375 R 375
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +G I EEL L+ TEEE+ D+ D + + ++F+EF+ L+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD E L +AF DK+++GY+S SE+ + GE
Sbjct: 73 A--KKVKDTDAE----------------EELKEAFKVFDKDQNGYISASELRHVMINLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + +E D D +G VN++EF+
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEFV 142
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEA 101
F S++ K K D+ K F+ FD+D NG I EL+ L K T+EE+ + +
Sbjct: 68 FLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKE 127
Query: 102 CDINKDMGMKFNEFIVLLCLV 122
D++ D + + EF+ ++ V
Sbjct: 128 ADLDGDGQVNYEEFVKMMMTV 148
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 373 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 414
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 415 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 325 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEE 384
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 385 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
Query: 119 LC 120
+
Sbjct: 445 MT 446
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D +G ++F EFL
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 212 R 212
R
Sbjct: 374 R 374
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D+NG+I EL L + +E E+NDL D++ + ++F+EF+ L+
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
LK + + + L++AF DKN DG +S +E+ +T GE
Sbjct: 74 S--RQLKSNDSE----------------QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEF 206
T E+ D +G +N ++F
Sbjct: 116 KLTDAEVDDMLREV-SDGSGEINIQQF 141
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ +G +S SE+ + G + E+D D N + F EFL +
Sbjct: 15 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 74
Query: 212 RWC 214
R
Sbjct: 75 RQL 77
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF-E 100
F +++ + K +DS + F+ FD++ +G I ELK + K T+ E++D+ E
Sbjct: 69 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128
Query: 101 ACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKS 136
D + ++ ++ +F LL K T R K+
Sbjct: 129 VSDGSGEINIQ--QFAALLS-----KGSSTGTRRKA 157
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 374 ARKMKYTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 416 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEE 385
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 119 LC 120
+
Sbjct: 446 MT 447
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 212 R 212
R
Sbjct: 375 R 375
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 73 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D +G ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 374 A--RWMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 416 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + + A+G F +++ ++ K DS + F FD+D NG
Sbjct: 340 LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNG 399
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 400 YISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 212 RW 213
RW
Sbjct: 375 RW 376
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 375 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 416
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 417 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 327 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 386
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 387 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
Query: 119 LC 120
+
Sbjct: 447 MT 448
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 316 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 375
Query: 212 R 212
R
Sbjct: 376 R 376
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D+NG+I EL L + +E E+NDL D++ + ++F+EF+ L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
LK + + + L++AF DKN DG +S +E+ +T GE
Sbjct: 73 S--RQLKSNDSE----------------QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEF 206
T E+ D +G +N ++F
Sbjct: 115 KLTDAEVDDMLREV-SDGSGEINIQQF 140
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ +G +S SE+ + G + E+D D N + F EFL +
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73
Query: 212 RWC 214
R
Sbjct: 74 RQL 76
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF-E 100
F +++ + K +DS + F+ FD++ +G I ELK + K T+ E++D+ E
Sbjct: 68 FLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLRE 127
Query: 101 ACDINKDMGMKFNEFIVLLC 120
D + ++ ++ +F LL
Sbjct: 128 VSDGSGEINIQ--QFAALLS 145
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 374 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 416 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 385
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 119 LC 120
+
Sbjct: 446 MT 447
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 212 R 212
R
Sbjct: 375 R 375
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 374 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 416 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 385
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 386 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
Query: 119 LC 120
+
Sbjct: 446 MT 447
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 374
Query: 212 R 212
R
Sbjct: 375 R 375
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 337 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 378
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 379 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 410
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 289 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 348
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 349 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
Query: 119 LC 120
+
Sbjct: 409 MT 410
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 278 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 337
Query: 212 R 212
R
Sbjct: 338 R 338
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 340 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 381
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 382 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 292 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 351
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 119 LC 120
+
Sbjct: 412 MT 413
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 340
Query: 212 R 212
R
Sbjct: 341 R 341
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 340 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 381
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 382 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 292 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 351
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 352 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
Query: 119 LC 120
+
Sbjct: 412 MT 413
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 281 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 340
Query: 212 R 212
R
Sbjct: 341 R 341
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDQMIREADIDGDGQVNYEEFVQMMT 147
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++ + DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 XLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 71 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 112
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 82
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 119 LC 120
+
Sbjct: 143 MT 144
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 212 R 212
R
Sbjct: 72 R 72
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 73 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 XLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 76
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 77 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 118
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 119 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 150
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 29 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 88
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 89 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
Query: 119 LC 120
+
Sbjct: 149 MT 150
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 18 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 77
Query: 212 R 212
R
Sbjct: 78 R 78
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 75 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 116
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 117 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 148
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 27 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 86
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 87 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
Query: 119 LC 120
+
Sbjct: 147 MT 148
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 16 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 75
Query: 212 R 212
R
Sbjct: 76 R 76
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 69 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 110
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 111 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 142
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 21 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 80
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 81 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
Query: 119 LC 120
+
Sbjct: 141 MT 142
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 212 R 212
R
Sbjct: 70 R 70
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 70 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 111
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 112 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 143
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 22 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 81
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 82 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
Query: 119 LC 120
+
Sbjct: 142 MT 143
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 70
Query: 212 R 212
R
Sbjct: 71 R 71
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 79 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 120
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 121 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 152
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 31 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 90
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 91 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
Query: 119 LC 120
+
Sbjct: 151 MT 152
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 20 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 79
Query: 212 R 212
R
Sbjct: 80 R 80
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
K++ + E + +AF DK+ +G++S +E+ +T GE
Sbjct: 73 A--------------------RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 144
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFP-KIDDSLRNCK 60
G I K + + EA++ + + A+G F + K+ DS +
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEEIR 84
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ ++
Sbjct: 85 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 144
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 73 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ +T GE
Sbjct: 73 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 71 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 112
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 82
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 119 LC 120
+
Sbjct: 143 MT 144
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 212 R 212
R
Sbjct: 72 R 72
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 71 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 112
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 82
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 83 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Query: 119 LC 120
+
Sbjct: 143 MT 144
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71
Query: 212 R 212
R
Sbjct: 72 R 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
D+ + K F FD+D +GTI +EL L TE E+ D+ D + + + F
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF+ L+ +KD + E L +AF DK+ +G++S +E+
Sbjct: 63 PEFLNLMA--RKMKDTDSE----------------EELKEAFRVFDKDGNGFISAAELRH 104
Query: 173 AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+T GE T + E D D +G VN++EF+
Sbjct: 105 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 139
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 22 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 81
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K F FD+D NG I EL+ L K T+EE++++ D++ D + + EF+ +
Sbjct: 82 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
Query: 119 LC 120
+
Sbjct: 142 MM 143
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 70
Query: 212 R 212
R
Sbjct: 71 R 71
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
D+ + K F FD+D +GTI +EL L TE E+ D+ D + + + F
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF+ L+ +KD + E L +AF DK+ +G++S +E+
Sbjct: 66 PEFLNLMA--RKMKDTDSE----------------EKLKEAFRVFDKDGNGFISAAELRH 107
Query: 173 AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+T GE T + E D D +G VN++EF+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEK 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K F FD+D NG I EL+ L K T+EE++++ D++ D + + EF+ +
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 119 LC 120
+
Sbjct: 145 MM 146
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 72 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 113
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 114 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 145
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 24 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 83
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 84 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
Query: 119 LC 120
+
Sbjct: 144 MT 145
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 13 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 72
Query: 212 R 212
R
Sbjct: 73 R 73
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
D+ + K F FD+D +GTI +EL L TE E+ D+ D + + + F
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF+ L+ +KD + E L +AF DK+ +G++S +E+
Sbjct: 66 PEFLNLMA--RKMKDTDSE----------------EELKEAFRVFDKDGNGFISAAELRH 107
Query: 173 AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+T GE T + E D D +G VN++EF+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K F FD+D NG I EL+ L K T+EE++++ D++ D + + EF+ +
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 119 LC 120
+
Sbjct: 145 MM 146
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
DD + K F FD+D +G I +EL L TE E+ D+ D + + + F
Sbjct: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF+ L+ +KD + E L +AF DK+++G++S +E+
Sbjct: 67 PEFLNLMA--RKMKDTDSE----------------EELKEAFRVFDKDQNGFISAAELRH 108
Query: 173 AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+T GE T + E D D +G +N++EF+
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K F FD+D NG I EL+ L K T+EE++++ D++ D + + EF+ +
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 145
Query: 119 L 119
+
Sbjct: 146 M 146
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL R
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D++G+I EL L + +E E+ DL D++ + ++F+EF+ L+
Sbjct: 14 KEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D + L++AF DKN DG +S +E+ +T GE
Sbjct: 74 SRQLKCNDSE------------------QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEF 206
T + E+ D +G +N K+F
Sbjct: 116 KLTDAEVDEMLREV-SDGSGEINIKQF 141
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ G +S SE+ + G + E+D D N + F EFL +
Sbjct: 15 EAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMS 74
Query: 212 RW 213
R
Sbjct: 75 RQ 76
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF-E 100
F +++ + K +DS + F+ FD++ +G I ELK + K T+ E++++ E
Sbjct: 69 FLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLRE 128
Query: 101 ACDINKDMGMKFNEFIVLLC 120
D + ++ +K +F LL
Sbjct: 129 VSDGSGEINIK--QFAALLS 146
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D+NG+I EL L + +E E+NDL D++ + ++F+EF+ L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
LK + + + L++AF DKN DG +S +E+ +T GE
Sbjct: 73 S--RQLKSNDSE----------------QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ +G +S SE+ + G + E+D D N + F EFL +
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73
Query: 212 RWC 214
R
Sbjct: 74 RQL 76
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +G++S +E+ +T GE
Sbjct: 74 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +G++S +E+ +T GE
Sbjct: 74 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGFISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +G++S +E+ +T GE
Sbjct: 73 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +G++S +E+ +T GE
Sbjct: 73 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 69 A--RKMKDTDS-----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 109
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E + D +G VN++EF+ T
Sbjct: 110 KLTDEEVDEMIREANIDGDGQVNYEEFVQMMT 141
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 69
Query: 212 R 212
R
Sbjct: 70 R 70
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF DK+ +GY+S +E+ +T GE
Sbjct: 73 A--RKMKDTDSE----------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E + D +G VN++EF+ T
Sbjct: 115 KLTDEEVDEMIREANIDGDGQVNYEEFVQMMT 146
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ +I+ D + + EF+ +
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
Query: 119 LC 120
+
Sbjct: 145 MT 146
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +G++S +E+ +T GE
Sbjct: 74 ARKMKDTDSEEEIR------------------EAFRVFDKDGNGFISAAELRHVMTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D D +G VN++EF+ T
Sbjct: 116 KLTDEEVDEMIRESDIDGDGQVNYEEFVTMMT 147
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 86 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
Query: 119 LC 120
+
Sbjct: 146 MT 147
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V++
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
V +K+D + KS E L D F DKN DG++ E+ + + +GE
Sbjct: 83 --VRQMKEDA---KGKSE----------EELADCFRIFDKNADGFIDIEELGEILRATGE 127
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 128 HVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L +C F FD++++G ID EEL + TEE+I DL + D N D +
Sbjct: 93 KSEEELADC---FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 149
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 150 DFDEFLKMM 158
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V++
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
V +K+D + KS E L + F D+N DGY+ E+ + SGE
Sbjct: 80 --VRQMKEDA---KGKSE----------EELAECFRIFDRNADGYIDAEELAEIFRASGE 124
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 125 HVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L C F FD +++G ID EEL + F T+EEI L + D N D +
Sbjct: 90 KSEEELAEC---FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRI 146
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 147 DFDEFLKMM 155
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 213 W 213
Sbjct: 82 Q 82
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ L+
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+M K + + E L++AF D++ +G +S +E+ +T GE
Sbjct: 73 A---------------RKM---KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + E D D +G +N++EF+
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F S++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
F+ FD D NG I EL+ L K T++E++++ DI+ D + + EF+ +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Query: 119 LC 120
+
Sbjct: 145 MV 146
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ L+
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+M K + + E L++AF D++ +G +S +E+ +T GE
Sbjct: 73 A---------------RKM---KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + E D D +G +N++EF+
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F S++ + K DS
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
F+ FD D NG I EL+ L K T++E++++ DI+ D + + EF+ +
Sbjct: 85 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 144
Query: 119 LC 120
+
Sbjct: 145 MV 146
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V++
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 79
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
V +K+D + KS E L + F D+N DGY+ E+ + SGE
Sbjct: 80 --VRQMKEDA---KGKSE----------EELAELFRIFDRNADGYIDAEELAEIFRASGE 124
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 125 HVTDEEIESLMKDGDKNNDGRIDFDEFL 152
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
+F FD +++G ID EEL + F T+EEI L + D N D + F+EF+ ++
Sbjct: 98 LFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 213 WC 214
Sbjct: 82 QM 83
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D + K F FD+D +G I +EL L TE E+ D+ D + + + F
Sbjct: 8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EF+ L+ +KD + E L +AF DK+++G++S +E+
Sbjct: 68 EFLNLMA--RKMKDTDSE----------------EELKEAFRVFDKDQNGFISAAELRHV 109
Query: 174 VTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+T GE T + E D D +G +N+ EF+
Sbjct: 110 MTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 143
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
G I K + + EA++ + + A+G F +++ + K DS
Sbjct: 26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
K F FD+D NG I EL+ L K T+EE++++ D++ D + ++EF+ +
Sbjct: 86 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKV 145
Query: 119 L 119
+
Sbjct: 146 M 146
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL R
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 75
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V++
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
V +K+D + KS E L D F DKN DG++ E+ + + +GE
Sbjct: 83 --VRQMKEDA---KGKSE----------EELEDCFRIFDKNADGFIDIEELGEILRATGE 127
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 128 HVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L +C F FD++++G ID EEL + TEE+I DL + D N D +
Sbjct: 93 KSEEELEDC---FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 149
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 150 DFDEFLKMM 158
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
++ + K F D D +G I EELK ++ E EI DL +A D++ + +
Sbjct: 23 EEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDY 82
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EFI + + + K+E + L AF + DK+ GY++ E+ Q
Sbjct: 83 KEFIA------------------ATLHLNKIERE-DHLFAAFTYFDKDGSGYITPDELQQ 123
Query: 173 AVTESGEGSTGRIAIKRFEEM----DWDKNGMVNFKEFL 207
A E G + R EE+ D D +G +++ EF+
Sbjct: 124 ACEEFG------VEDVRIEELXRDVDQDNDGRIDYNEFV 156
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D D + + + F EF+
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXX 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ T GE
Sbjct: 73 ARCXKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + E D D +G VN++EF+
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEFV 142
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 22 EAKMVEAMQRRAAEGTALKSFNSIIL---KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEE 78
EA++ + + A+G +F + + K DS + F FD+D NG I E
Sbjct: 45 EAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAE 104
Query: 79 LKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
L+ L K T+EE+++ DI+ D + + EF+
Sbjct: 105 LRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ G T E+D D NG +NF EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V+
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM- 81
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+V +K+D + KS E L + F DKN DG++ E+ + + +GE
Sbjct: 82 -MVRQMKEDA---KGKSE----------EELANCFRIFDKNADGFIDIEELGEILRATGE 127
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 128 HVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L NC F FD++++G ID EEL + TEE+I DL + D N D +
Sbjct: 93 KSEEELANC---FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 149
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 150 DFDEFLKMM 158
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V+
Sbjct: 20 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM- 78
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+V +K+D + KS E L + F DKN DG++ E+ + + +GE
Sbjct: 79 -MVRQMKEDA---KGKSE----------EELANCFRIFDKNADGFIDIEELGEILRATGE 124
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T ++ D + +G ++F EFL
Sbjct: 125 HVTEEDIEDLMKDSDKNNDGRIDFDEFL 152
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L NC F FD++++G ID EEL + TEE+I DL + D N D +
Sbjct: 90 KSEEELANC---FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 146
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 147 DFDEFLKMM 155
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 213 W 213
Sbjct: 82 Q 82
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D D + + + F EF+
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXX 73
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ T GE
Sbjct: 74 ARKXKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVXTNLGE 115
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + E D D +G VN++EF+
Sbjct: 116 KLTDEEVDQXIREADIDGDGQVNYEEFV 143
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIIL---KFPKIDDSLRN 58
G I K + + EA++ + + A+G F + + K DS
Sbjct: 26 GTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEE 85
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ F FD+D NG I EL+ L K T+EE++ DI+ D + + EF+
Sbjct: 86 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF DK+ DG ++ E+ G+ T E+D D NG ++F EFL R
Sbjct: 16 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXAR 75
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D D + + + F EF+
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXX 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D +R +AF DK+ +GY+S +E+ T GE
Sbjct: 73 ARKXKDTDSEEEIR------------------EAFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
T + E D D +G VN++EF+
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEFV 142
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIIL---KFPKIDDSLRN 58
G I K + + EA++ + + A+G F + + K DS
Sbjct: 25 GTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEE 84
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ F FD+D NG I EL+ L K T+EE+++ DI+ D + + EF+
Sbjct: 85 IREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF DK+ DG ++ E+ G+ T E+D D NG ++F EFL R
Sbjct: 15 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXAR 74
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V+
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM- 81
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+V +K+D + KS E L + F DKN DG++ E+ + + +GE
Sbjct: 82 -MVRQMKEDA---KGKSE----------EELANCFRIFDKNADGFIDIEELGEILRATGE 127
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
++ D + +G ++F EFL
Sbjct: 128 HVIEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L NC F FD++++G ID EEL + EE+I DL + D N D +
Sbjct: 93 KSEEELANC---FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRI 149
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 150 DFDEFLKMM 158
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
++ + K F +FD++ G I EL L TE E+ DL + N + + F
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF ++ D T E + +AF D++ DG++S +E+
Sbjct: 66 TEFCGIMAKQMRETD------------------TEEEMREAFKIFDRDGDGFISPAELRF 107
Query: 173 AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+ GE T + E D+D +GM+N++EF++ ++
Sbjct: 108 VMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEA 101
F I+ K + D+ + F+ FD D +G I EL+ L K T+EEI+++
Sbjct: 68 FCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIRE 127
Query: 102 CDINKDMGMKFNEFIVLLC 120
D + D + + EF+ ++
Sbjct: 128 ADFDGDGMINYEEFVWMIS 146
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 47 LKFP-----KIDDSLR-----NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEIN 96
+K+P + D SLR + F +FD+D +G I+ +L C + TE E+
Sbjct: 5 VKYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELI 64
Query: 97 DLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVF 156
+L + ++N + F++F+ L+ P L + M + L DAF
Sbjct: 65 ELSQQINMNLGGHVDFDDFVELMG--------PKLLAETADM------IGVKELRDAFRE 110
Query: 157 LDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKR-FEEMDWDKNGMVNFKEFLFAFTR 212
D N DG +S SE+ +A+ + G I+ ++D + +G V+F+EF+ +R
Sbjct: 111 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 52 IDDSLR-----NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINK 106
+D SLR + F +FD+D +G I+ +L C + TE E+ +L + ++N
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 107 DMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVS 166
+ F++F+ L+ P L + M + L DAF D N DG +S
Sbjct: 61 GGHVDFDDFVELMG--------PKLLAETADM------IGVKELRDAFREFDTNGDGEIS 106
Query: 167 RSEMTQAVTESGEGSTGRIAIKR-FEEMDWDKNGMVNFKEFLFAFTR 212
SE+ +A+ + G I+ ++D + +G V+F+EF+ +R
Sbjct: 107 TSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +G I EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMM 72
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
D+ +R +AF DK+ +G+VS +E+ +T GE
Sbjct: 73 ARKMKDTDNEEEIR------------------EAFRVFDKDGNGFVSAAELRHVMTRLGE 114
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ + D D +G VN++EF+
Sbjct: 115 KLSDEEVDEMIRAADTDGDGQVNYEEFV 142
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 16 MPETKLEAKMVEAMQR--RAAEGTA-LKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
+ + EA++ + M R GT F ++ + K D+ + F FD+D NG
Sbjct: 39 LGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNG 98
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
+ EL+ +L K ++EE++++ A D + D + + EF+ +L
Sbjct: 99 FVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLV 146
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG V+F EFL
Sbjct: 14 EAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 52 IDDSLR-----NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINK 106
+D SLR + F +FD+D +G I+ +L C + TE E+ +L + ++N
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNL 60
Query: 107 DMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVS 166
+ F++F+ L+ P L + M + L DAF D N DG +S
Sbjct: 61 GGHVDFDDFVELMG--------PKLLAETADM------IGVKELRDAFREFDTNGDGEIS 106
Query: 167 RSEMTQAVTESGEGSTGRIAIKR-FEEMDWDKNGMVNFKEFLFAFTR 212
SE+ +A+ G I+ ++D + +G V+F+EF+ +R
Sbjct: 107 TSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDS- 89
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
+ KS E L D F DKN DGY+ E+ + +GE T +
Sbjct: 90 --KGKSE----------EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ EFL
Sbjct: 138 KDGDKNNDGRIDYDEFL 154
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDSK 90
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
T E L D F DKN DGY+ E+ + +GE T +
Sbjct: 91 G-------------KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ EFL
Sbjct: 138 KDGDKNNDGRIDYDEFL 154
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDS- 89
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
+ KS E L D F DKN DGY+ E+ + +GE T +
Sbjct: 90 --KGKSE----------EELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ EFL
Sbjct: 138 KDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 34/217 (15%)
Query: 5 VGKPESATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFE 64
+ K S T T LE+ M Q +A + A + + K +D++ + IF
Sbjct: 280 IQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDET-KQLTEIFR 338
Query: 65 KFDEDSNGTIDHEELKKCFHKL--------------EIKFTEEEINDLFEACDINKDMGM 110
K D +++G +D +EL + +H+ E E++I+ L D++ +
Sbjct: 339 KLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSI 398
Query: 111 KFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEM 170
+++EFI D T L ++ RM AF DK+ G +S E+
Sbjct: 399 EYSEFIASAI-------DRTILLSRERMER------------AFKMFDKDGSGKISTKEL 439
Query: 171 TQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ +++ E++D +K+G V+F EF+
Sbjct: 440 FKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
F+ FD+D +G I +EL K F + + EE+ + E D NKD + FNEF+ +L
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDS- 89
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
+ KS E L D F DKN DGY+ E+ + +GE T +
Sbjct: 90 --KGKSE----------EELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ EFL
Sbjct: 138 KDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRCMKDDSK 90
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
T E L D F DKN DGY+ E+ + +GE T +
Sbjct: 91 G-------------KTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ EFL
Sbjct: 138 KDGDKNNDGRIDYDEFL 154
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 22/125 (17%)
Query: 52 IDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMK 111
I++ ++ +F K D + NG++ H E+ + IK + +IN + +A DIN +
Sbjct: 34 INNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQALDINDRGNIT 91
Query: 112 FNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMT 171
+ EF+ R K+ +E+TF L AF +DK++DGY+S+S++
Sbjct: 92 YTEFM------------AGCYRWKN------IESTF--LKAAFNKIDKDEDGYISKSDIV 131
Query: 172 QAVTE 176
V +
Sbjct: 132 SLVHD 136
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDS- 89
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
+ KS E L D F DKN DGY+ E+ + +GE T +
Sbjct: 90 --KGKSE----------EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ E+L
Sbjct: 138 KDGDKNNDGRIDYDEWL 154
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID +ELK TE++I +L + D N D + ++E++
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWL 154
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ + F+ FD D GTID +ELK L + +EEI + D M F +F+
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 117 VLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTE 176
++ KD T E ++ AF D ++ G +S + + E
Sbjct: 66 TVMTQKMSEKD------------------TKEEILKAFKLFDDDETGKISFKNLKRVAKE 107
Query: 177 SGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
GE T + +E D D +G V+ +EFL
Sbjct: 108 LGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
F+ FD+D G I + LK+ +L T+EE+ ++ + D + D + EF+ ++
Sbjct: 85 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCL 121
+F FD+D+NG I EE EE+++ FE D+N D + F+E + ++
Sbjct: 68 LFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVAS 127
Query: 122 VYLLKDDPTALRAKSRMGMPKLEATFETLV-DAFVFLDKNKDGYVSRSEMTQA 173
VY + S + + + EAT E V F +DKN+DGY++ E +
Sbjct: 128 VYKM--------MGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG 172
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 31/127 (24%)
Query: 92 EEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLV 151
E+ N LF D + + + F EFI T L SR + E L
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFI-------------TVLSTTSRGTLE------EKLS 102
Query: 152 DAFVFLDKNKDGYVSRSEMT-----------QAVTESGEGSTGRIAIKR-FEEMDWDKNG 199
AF D N DGY++ EM VT + + +T + +K+ F+ MD +++G
Sbjct: 103 WAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDG 162
Query: 200 MVNFKEF 206
+ EF
Sbjct: 163 YITLDEF 169
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 154 FVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
F DK+ +G++ E ++ + G+ FE D + +G + F E L
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEML 122
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +G I ++L L TE E+ D+ + + + F +F+ ++
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMM 373
Query: 120 CLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGE 179
+KD + E + +AF K+ +GY+S +++ +T GE
Sbjct: 374 A--RKMKDTDSE----------------EEIREAFRVFGKDGNGYISAAQLRHVMTNLGE 415
Query: 180 GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
T + E D +G VN+++F+ T
Sbjct: 416 KLTDEEVDEMIREAGIDGDGQVNYEQFVQMMT 447
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 2 GGIVGKPESATSTWMPETKLEAKMVEAMQRRAAEGTA---LKSFNSIILKFPKIDDSLRN 58
GGI K + + EA++ + + A+G F +++ + K DS
Sbjct: 326 GGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEE 385
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F F +D NG I +L+ L K T+EE++++ I+ D + + +F+ +
Sbjct: 386 IREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQM 445
Query: 119 LC 120
+
Sbjct: 446 MT 447
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ ++ + G+ T E+ D NG ++F +FL
Sbjct: 315 EAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMA 374
Query: 212 R 212
R
Sbjct: 375 R 375
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D+NG+I EL L + +E E+NDL D++ + ++F+EF+ L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 120 C 120
Sbjct: 73 S 73
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ +G +S SE+ + G + E+D D N + F EFL +
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73
Query: 212 RWC 214
R
Sbjct: 74 RQL 76
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT 130
+G+I +EL K L T EE+ ++ + D + + F+EF+V++ V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMM--VRSMKDDS- 89
Query: 131 ALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRF 190
+ KS E L D F DKN DGY+ E+ + +GE T +
Sbjct: 90 --KGKSE----------EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 191 EEMDWDKNGMVNFKEFL 207
++ D + +G +++ E L
Sbjct: 138 KDGDKNNDGRIDYDEXL 154
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F EF
Sbjct: 20 FKAAFDIFVL--GAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID +ELK TE++I +L + D N D + ++E +
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXL 154
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMG--MKFNE 114
+ + F+ FD D +GTID +ELK L + +EEI + DI+KD + F E
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMI--ADIDKDGSGTIDFEE 65
Query: 115 FIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAV 174
F+ ++ ++MG + E ++ AF D ++ G +S + +
Sbjct: 66 FLQMMT---------------AKMGERD---SREEIMKAFRLFDDDETGKISFKNLKRVA 107
Query: 175 TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E GE T + +E D D +G VN +EF
Sbjct: 108 KELGENMTDEELQEMIDEADRDGDGEVNEEEFF 140
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS F FD+D G I + LK+ +L T+EE+ ++ + D + D +
Sbjct: 78 DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEE 137
Query: 114 EFIVLLCLVYLL 125
EF ++ L
Sbjct: 138 EFFRIMKKTSLF 149
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 33/163 (20%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKL--------EIKFTEEEINDLFEACDINKDMGMKFN 113
IF+K D++ +G +D +EL + ++ L E+K EEE++++ + D +K+ ++++
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ- 172
EFI +C+ D L ++ R L AF D +K G +++ E+
Sbjct: 420 EFIS-VCM------DKQILFSEER------------LRRAFNLFDTDKSGKITKEELANL 460
Query: 173 -AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
+T E + + E D +K+ M++F EF+ + C
Sbjct: 461 FGLTSISEKTWNDV----LGEADQNKDNMIDFDEFVSMMHKIC 499
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 150 LVDAFVFLDKNKDGYVSRSEMTQAV-------TESGEGSTGRIAIKR-FEEMDWDKNGMV 201
L D F LDKN DG + + E+ + E GE + +E+D+DKNG +
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYI 416
Query: 202 NFKEFL 207
+ EF+
Sbjct: 417 EYSEFI 422
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLV 122
F FD +++G +D+ ELK L + + EI DL + D MK+++F +++
Sbjct: 29 FSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMG-E 87
Query: 123 YLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGST 182
+LK DP + + AF D + G +S + + E GE T
Sbjct: 88 KILKRDP-----------------LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLT 130
Query: 183 GRIAIKRFEEMDWDKNGMVNFKEFL 207
EE D D +G +N EF+
Sbjct: 131 DEELRAMIEEFDLDGDGEINENEFI 155
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D L K F+ FD+D G I + L++ +L T+EE+ + E D++ D + N
Sbjct: 93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINEN 152
Query: 114 EFIVL 118
EFI +
Sbjct: 153 EFIAI 157
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 62 EFVQMMT 68
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 208 FAFT 211
T
Sbjct: 65 QMMT 68
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L +AF DK+++GY+S SE+ + GE T + +E D D +G VN++EF+
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D+ K F+ FD+D NG I EL+ L K T+EE+ + + D++ D + +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 114 EFIVLLCLV 122
EF+ ++ V
Sbjct: 61 EFVKMMMTV 69
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 66 EFVQMMT 72
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 208 FAFT 211
T
Sbjct: 69 QMMT 72
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 63 EFVQMMT 69
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 208 FAFT 211
T
Sbjct: 66 QMMT 69
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 65 EFVQMMT 71
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 208 FAFT 211
T
Sbjct: 68 QMMT 71
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHK-----------LEIKFTEEEINDLFEAC 102
D + AIF K D++ +G +D EL + + + L+ E E++ + +A
Sbjct: 355 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 414
Query: 103 DINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKD 162
D +K+ ++++EF+ + A+ K+ + +LE AF D +
Sbjct: 415 DFDKNGYIEYSEFVTV------------AMDRKTLLSRERLER-------AFRMFDSDNS 455
Query: 163 GYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
G +S +E+ S S ++ E+D + +G V+F EF + C
Sbjct: 456 GKISSTELATIFGVSDVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLKLC 505
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHK-----------LEIKFTEEEINDLFEAC 102
D + AIF K D++ +G +D EL + + + L+ E E++ + +A
Sbjct: 332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 391
Query: 103 DINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKD 162
D +K+ ++++EF+ + A+ K+ + +LE AF D +
Sbjct: 392 DFDKNGYIEYSEFVTV------------AMDRKTLLSRERLER-------AFRMFDSDNS 432
Query: 163 GYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
G +S +E+ S S ++ E+D + +G V+F EF + C
Sbjct: 433 GKISSTELATIFGVSDVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLKLC 482
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 32/172 (18%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHK-----------LEIKFTEEEINDLFEAC 102
D + AIF K D++ +G +D EL + + + L+ E E++ + +A
Sbjct: 356 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAV 415
Query: 103 DINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKD 162
D +K+ ++++EF+ + A+ K+ + +LE AF D +
Sbjct: 416 DFDKNGYIEYSEFVTV------------AMDRKTLLSRERLER-------AFRMFDSDNS 456
Query: 163 GYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
G +S +E+ S S ++ E+D + +G V+F EF + C
Sbjct: 457 GKISSTELATIFGVSDVDSETWKSV--LSEVDKNNDGEVDFDEFQQMLLKLC 506
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L +AF DK+++GY+S SE+ + GE T + +E D D +G VN++EF+
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D+ K F+ FD+D NG I EL+ L K T+EE+ + + D++ D + +
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 114 EFIVLLCLV 122
EF+ ++ V
Sbjct: 66 EFVKMMMTV 74
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 114 EFIVLL 119
EF+ ++
Sbjct: 62 EFVQMM 67
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
+ K +F+ D D++GTI +ELK ++ + E EI DL +A DI+K + + EF
Sbjct: 22 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
Query: 116 IV 117
I
Sbjct: 82 IA 83
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
++F I +F DS +F FD D NG + E+ K L +E++N F
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAF 144
Query: 100 EACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDK 159
DINKD + E + ++ +Y + T K +E F+ +DK
Sbjct: 145 NLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQK-------MDK 197
Query: 160 NKDGYVSRSEMTQA 173
NKDG V+ E ++
Sbjct: 198 NKDGVVTIDEFIES 211
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 31/122 (25%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
LF A D + + + F +FI L ++ LR + E L AF
Sbjct: 107 LFNAFDTDHNGAVSFEDFIKGLSIL---------LRGTVQ----------EKLNWAFNLY 147
Query: 158 DKNKDGYVSRSEMTQAVTESGE--GSTGRIAIKR----------FEEMDWDKNGMVNFKE 205
D NKDGY+++ EM + + G +K F++MD +K+G+V E
Sbjct: 148 DINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDE 207
Query: 206 FL 207
F+
Sbjct: 208 FI 209
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 208 FAFT 211
T
Sbjct: 62 QMMT 65
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ F FD+D NG I EL+ L K T+EE++++ DI+ D + + EF+ +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 119 LC 120
+
Sbjct: 64 MT 65
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS K F FD+D NG I EL+ L K T+EE++++ D++ D + +
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 114 EFIVLL 119
EF+ ++
Sbjct: 61 EFVKVM 66
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L +AF DK+++G++S +E+ +T GE T + E D D +G +N++EF+
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLV 122
F FD +++G +D+ ELK L + + EI DL + D K+++F ++
Sbjct: 29 FSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXG-E 87
Query: 123 YLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGST 182
+LK DP + + AF D + G +S + + E GE T
Sbjct: 88 KILKRDP-----------------LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLT 130
Query: 183 GRIAIKRFEEMDWDKNGMVNFKEFL 207
EE D D +G +N EF+
Sbjct: 131 DEELRAXIEEFDLDGDGEINENEFI 155
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 24 KMVEAMQRRAAEGTALKSFNSI-ILKFPKI--DDSLRNCKAIFEKFDEDSNGTIDHEELK 80
++++ + +EG L ++ I+ KI D L K F+ FD+D G I + L+
Sbjct: 60 EILDLIDEYDSEGRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLR 119
Query: 81 KCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+ +L T+EE+ E D++ D + NEFI +
Sbjct: 120 RVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F FD+D NG I +L+ L K T+EE++++ DI+ D + +
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 114 EFIVLLC 120
+F+ ++
Sbjct: 64 DFVQMMT 70
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +++ +T GE T + E D D +G VN+++F+
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 208 FAFT 211
T
Sbjct: 67 QMMT 70
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E + +AF DK+ +GY+S +E+ +T GE T + E D D +G VN++EF+
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 208 FAFT 211
T
Sbjct: 89 QMMT 92
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS + F D+D NG I EL+ L K T+EE++++ DI+ D + +
Sbjct: 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 86 EFVQMMT 92
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHK--LEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
C F+ FD D NG I EELK+ F + +E ++ I+ L + D+N D + F+EF+
Sbjct: 131 CLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Query: 117 VLLC 120
+++
Sbjct: 191 LMMS 194
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
+D L + F+ FD D NG I +EL L E E+ + + D++ D + F
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 113 NEFIVLL 119
EF+ LL
Sbjct: 92 EEFVTLL 98
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 129 PTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTG---RI 185
P L + + +P E E + +AF D++ +G++S+ E+ A+ G +
Sbjct: 19 PNLLSEQRPVDIP--EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEV 76
Query: 186 AIKRFEEMDWDKNGMVNFKEFL 207
I+R +D D +G V+F+EF+
Sbjct: 77 IIQR---LDMDGDGQVDFEEFV 95
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS F+ FD D NG I EL+ L K T++E++++ DI+ D + +
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 65 EFVRMMV 71
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L++AF D++ +G +S +E+ +T GE T + E D D +G +N++EF+
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 139 GMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKN 198
G K A ++L+ + +D +KDGYVS E + G T AI F +D++KN
Sbjct: 94 GEEKAXAVIQSLI-XYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKN 152
Query: 199 GMVNFKEFL 207
G ++ EFL
Sbjct: 153 GQISRDEFL 161
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ + F+ FD D +GTID +ELK L + +EEI + D + + F EF+
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 117 VLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTE 176
++ ++MG + E ++ AF D + G ++ ++ + E
Sbjct: 88 TMMT---------------AKMGERD---SREEILKAFRLFDDDNSGTITIKDLRRVAKE 129
Query: 177 SGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
GE T + E D + + ++ EF+
Sbjct: 130 LGENLTEEELQEMIAEADRNDDNEIDEDEFI 160
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS F FD+D++GTI ++L++ +L TEEE+ ++ D N D + +
Sbjct: 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 157
Query: 114 EFIVLLCLVYL 124
EFI ++ L
Sbjct: 158 EFIRIMKKTSL 168
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 135 KSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMD 194
K R+G+ E + + +AF D + G + E+ A+ G K E+D
Sbjct: 17 KGRVGLT--EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID 74
Query: 195 WDKNGMVNFKEFLFAFT 211
D +G ++F+EFL T
Sbjct: 75 KDGSGTIDFEEFLTMMT 91
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
A F++FD D +G I +EEL + F E+ +E + + + CD N D + F EF+ ++
Sbjct: 401 AAFQQFDSDGSGKITNEELGRLFGVTEV--DDETWHQVLQECDKNNDGEVDFEEFVEMM 457
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKL-----------EIKFTEEEINDLFEACDINKDMGM 110
IF + D + +G +D +EL + + KL + E E++ + ++ D +++ +
Sbjct: 319 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 378
Query: 111 KFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEM 170
+++EF+ + C+ D L ++ R L+ AF D + G ++ E+
Sbjct: 379 EYSEFVTV-CM------DKQLLLSRER------------LLAAFQQFDSDGSGKITNEEL 419
Query: 171 TQ--AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
+ VTE + + ++ +E D + +G V+F+EF+ + C
Sbjct: 420 GRLFGVTEVDDETWHQV----LQECDKNNDGEVDFEEFVEMMQKIC 461
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 29/172 (16%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEA--------------- 101
R A F FD+D NG ID + + +F +D +A
Sbjct: 4 RRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGI 63
Query: 102 CDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNK 161
D + D + EF+ V L+D P + M P L A A D +
Sbjct: 64 ADRDGDQRITREEFVT--GAVKRLRDKPDRF---AEMARPFLHA-------ALGVADTDG 111
Query: 162 DGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRW 213
DG V+ ++ +A+T G +A + +D D +G V E + AF R+
Sbjct: 112 DGAVTVADTARALTAFGVPED--LARQAAAALDTDGDGKVGETEIVPAFARY 161
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + D + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D +G ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
A F++FD D +G I +EEL + F E+ +E + + + CD N D + F EF+ ++
Sbjct: 127 AAFQQFDSDGSGKITNEELGRLFGVTEVD--DETWHQVLQECDKNNDGEVDFEEFVEMM 183
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 77/166 (46%), Gaps = 36/166 (21%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKL-----------EIKFTEEEINDLFEACDINKDMGM 110
IF + D + +G +D +EL + + KL + E E++ + ++ D +++ +
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104
Query: 111 KFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEM 170
+++EF+ + C+ D L ++ R L+ AF D + G ++ E+
Sbjct: 105 EYSEFVTV-CM------DKQLLLSRER------------LLAAFQQFDSDGSGKITNEEL 145
Query: 171 TQ--AVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRWC 214
+ VTE + + ++ +E D + +G V+F+EF+ + C
Sbjct: 146 GRLFGVTEVDDETWHQV----LQECDKNNDGEVDFEEFVEMMQKIC 187
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +G I EEL L+ TEEE+ D+ D + + ++F+EF+ L+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 148 ETLVD---AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFK 204
E +VD AF DK+ DG ++ E+ + + T E+D D NG + F
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 205 EFL 207
EFL
Sbjct: 67 EFL 69
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +G I EEL L+ TEEE+ D+ D + + ++F+EF+ L+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 148 ETLVD---AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFK 204
E +VD AF DK+ DG ++ E+ + + T E+D D NG + F
Sbjct: 7 EQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Query: 205 EFL 207
EFL
Sbjct: 67 EFL 69
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 29/172 (16%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEA--------------- 101
R A F FD+D NG ID + L +F +D +A
Sbjct: 4 RRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGI 63
Query: 102 CDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNK 161
D + D + EF+ V L+D P + + P L A A D +
Sbjct: 64 ADRDGDQRITREEFVT--GAVKRLRDKPDRF---AEIARPFLHA-------ALGVADTDG 111
Query: 162 DGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTRW 213
DG V+ ++ +A+T G +A + +D D +G V E + AF R+
Sbjct: 112 DGAVTVADTARALTAFGVPED--LARQAAAALDTDGDGKVGETEIVPAFARY 161
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 139 GMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKN 198
G K A ++L+ + +D +KDGYVS E + G T AI F +D++KN
Sbjct: 94 GEEKAMAVIQSLI-MYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKN 152
Query: 199 GMVNFKEFL 207
G ++ EFL
Sbjct: 153 GQISRDEFL 161
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F +D+D +GTI +EL L + TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 CLV 122
+
Sbjct: 73 ARI 75
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G T E+D D NG ++F EFL
Sbjct: 14 EAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
R K IF FD+ G I + L + T + + D+ IN D ++ +
Sbjct: 4 RANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDI-----INADSSLRDASSL 58
Query: 117 VLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTE 176
L + L++ + L A ++ A E V AF DK G VS ++ +T
Sbjct: 59 TLDQITGLIEVNEKELDATTK-------AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTG 111
Query: 177 SGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
GE T + + ++ D NG +++K+F+
Sbjct: 112 LGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.4 bits (85), Expect = 0.008, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
L + + F FD+D +G I +EL++ L +EE++ + D+++D + + EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 116 IVLL 119
+L
Sbjct: 65 ARML 68
Score = 33.1 bits (74), Expect = 0.12, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 145 ATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFK 204
A E L AF D++ DG+++ E+ +A+ G+ E D D++G VN++
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
Query: 205 EF 206
EF
Sbjct: 63 EF 64
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLV 122
F D++ NGTI EL++ L T E+ +L + ++ D + + F+ +L
Sbjct: 82 FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTG 141
Query: 123 YLL 125
Y L
Sbjct: 142 YPL 144
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D ++ C F+ FD+D++G + EEL L T E+N I + K
Sbjct: 5 DQIQEC---FQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNT------IKGQLNAK-- 53
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EF D + R + + ++DAF LDK +G + +E+ Q
Sbjct: 54 EF------------DLATFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQL 101
Query: 174 VTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ G+ T + +E+ +G +N++ F+
Sbjct: 102 LLNLGDALTSSEVEELMKEVSVSGDGAINYESFV 135
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ + F+ FD D +GTID +ELK L + +EEI + D + + F EF+
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 117 VLLC 120
++
Sbjct: 90 TMMT 93
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 37/153 (24%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEIND-LFEACDINKDMGMKFNEFIVL- 118
A F K D +SNGT+ +E ++ F +L F ++ + D LF D ++ + F+E++ L
Sbjct: 192 ADFRKIDTNSNGTLSRKEFREHFVRL--GFDKKSVQDALFRYADEDESDDVGFSEYVHLG 249
Query: 119 LCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESG 178
LCL+ L R+ + F D +K G +S+ E+ + + ++
Sbjct: 250 LCLLVL------------RI--------------LYAFADFDKSGQLSKEEVQKVLEDAH 283
Query: 179 EGSTGRIAIKRFEE----MDWDKNGMVNFKEFL 207
+ R K+FE +D D + ++++EF+
Sbjct: 284 IPESAR---KKFEHQFSVVDVDDSKSLSYQEFV 313
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
DD + K FE FD + G I E L+ + ++ N++F D + ++F
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQ 172
EF+ ++ RM K + + L AF D GY+ ++ +
Sbjct: 62 PEFLSMMG---------------RRM---KQTTSEDILRQAFRTFDPEGTGYIPKAALQD 103
Query: 173 AVTESGE 179
A+ G+
Sbjct: 104 ALLNLGD 110
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Query: 120 C 120
Sbjct: 74 A 74
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 74
Query: 212 R 212
R
Sbjct: 75 R 75
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKL------EIKFTEEEINDLFEACDINKDMGM 110
+ K F+ +D D NG+ID EL F + + EE IN +F DIN D +
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 111 KFNEFIV-------LLCLVYLLKDDPTALRAKSRMGMPKLEA 145
EFI LL +VY D LR P +E
Sbjct: 153 TLEEFINGMAKDQDLLEIVYKSFDFSNVLRVICNGKQPDMET 194
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V+
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM- 81
Query: 120 CLVYLLKDDP 129
+V +K+D
Sbjct: 82 -MVRQMKEDA 90
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 41 SFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFE 100
+F I +F D+ +F FD D NG I E+ L E++ F
Sbjct: 113 TFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFN 172
Query: 101 ACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKN 160
DINKD + E + ++ +Y + + + + +A E + F +D+N
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIY-------DMMGRHTYPILREDAPLEHVERFFQKMDRN 225
Query: 161 KDGYVSRSE 169
+DG V+ E
Sbjct: 226 QDGVVTIDE 234
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 33/123 (26%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
LF A D + + + F +F+V L ++ LR E L AF
Sbjct: 134 LFNAFDADGNGAIHFEDFVVGLSIL---------LRG----------TVHEKLKWAFNLY 174
Query: 158 DKNKDGYVSRSEMTQAVTESGEGSTGR--IAIKR-----------FEEMDWDKNGMVNFK 204
D NKDG +++ EM A+ +S GR I R F++MD +++G+V
Sbjct: 175 DINKDGCITKEEML-AIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTID 233
Query: 205 EFL 207
EFL
Sbjct: 234 EFL 236
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 51 KIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGM 110
K ++ L NC F FD++++G ID EEL + EE+I DL + D N D +
Sbjct: 7 KSEEELANC---FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRI 63
Query: 111 KFNEFIVLL 119
F+EF+ ++
Sbjct: 64 DFDEFLKMM 72
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L + F DKN DG++ E+ + + +GE ++ D + +G ++F EFL
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
DS F FD+D++GTI ++L++ +L TEEE+ ++ D N D + +
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 114 EFIVLL 119
EFI ++
Sbjct: 66 EFIRIM 71
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
K F FD+D +GTI +EL L TE E+ D+ D + + + F EF+ ++
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 120 C 120
Sbjct: 73 A 73
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
+AF DK+ DG ++ E+ + G+ T E+D D NG ++F EFL
Sbjct: 14 EAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA 73
Query: 212 R 212
R
Sbjct: 74 R 74
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I +EL L T+EE++ + E D + + F EF+V++
Sbjct: 12 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
Query: 120 C 120
Sbjct: 72 V 72
Score = 30.4 bits (67), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S E+ + G+ T EE+D D +G ++F+EFL R
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 73
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM 108
F+ FD + G I E++ L + TE++ ND+F CDI +D+
Sbjct: 91 FKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDI 136
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 50/169 (29%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKL-----EIKFTEEEINDLFEACDINKDMGM 110
LR+C + G + EE KK + KF E +F D N D +
Sbjct: 35 LRDCPS----------GHLSMEEFKKIYGNFFPYGDASKFAEH----VFRTFDANGDGTI 80
Query: 111 KFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEM 170
F EFI+ AL SR KLE + L AF D + +GY+S++EM
Sbjct: 81 DFREFII-------------ALSVTSR---GKLE---QKLKWAFSMYDLDGNGYISKAEM 121
Query: 171 TQAVT------------ESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ V E + + K F +MD +++G ++ +EF+
Sbjct: 122 LEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 38 ALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEIND 97
+++ F I F D+ + + +F FD + +GTID E E+++
Sbjct: 44 SMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW 103
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDA-FVF 156
F D++ + + E + ++ +Y + S M MP+ E+T E + F
Sbjct: 104 AFSMYDLDGNGYISKAEMLEIVQAIYKM--------VSSVMKMPEDESTPEKRTEKIFRQ 155
Query: 157 LDKNKDGYVSRSEMTQAV 174
+D N+DG +S E +
Sbjct: 156 MDTNRDGKLSLEEFIRGA 173
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 39/168 (23%)
Query: 57 RNCKAIFEKF-DEDSNGTIDHEELKKCFHKLEIKFTEEEIND----LFEACDINKDMGMK 111
R + ++ F +E +G ++ E K+ + + F + + LF A D + +K
Sbjct: 18 RELQVLYRGFKNEXPSGVVNEETFKQIYAQF---FPHGDASTYAHYLFNAFDTTQTGSVK 74
Query: 112 FNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMT 171
F +F+ L ++ LR E L F D NKDGY+++ EM
Sbjct: 75 FEDFVTALSIL---------LRG----------TVHEKLRWTFNLYDINKDGYINKEEMM 115
Query: 172 QAVTESGE--GSTGRIAIKR----------FEEMDWDKNGMVNFKEFL 207
V + G +K F++MD +K+G+V EFL
Sbjct: 116 DIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFL 163
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
++F I +F D+ +F FD G++ E+ L E++ F
Sbjct: 39 ETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF 98
Query: 100 EACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKL-EATFETLVDAFVF-L 157
DINKD + E + ++ +Y + + P L E T VD F +
Sbjct: 99 NLYDINKDGYINKEEMMDIVKAIYDM---------MGKYTYPVLKEDTPRQHVDVFFQKM 149
Query: 158 DKNKDGYVSRSEMTQAVTE 176
DKNKDG V+ E ++ E
Sbjct: 150 DKNKDGIVTLDEFLESXQE 168
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 19/87 (21%)
Query: 136 SRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGR--IAIKR---- 189
S MG E L AF D NKDGY+++ EM A+ +S GR I R
Sbjct: 2 SHMG-----TVHEKLKWAFNLYDINKDGYITKEEML-AIMKSIYDMMGRHTYPILREDAP 55
Query: 190 -------FEEMDWDKNGMVNFKEFLFA 209
FE+MD +++G+V +EFL A
Sbjct: 56 AEHVERFFEKMDRNQDGVVTIEEFLEA 82
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 157 LDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
D N DG +S SE+T A+ G S + + E+D D +G ++F EF+
Sbjct: 12 FDTNGDGKISLSELTDALRTLGSTSADEVQ-RMMAEIDTDGDGFIDFNEFI 61
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
IF++FD + +G I EL L + +E+ + D + D + FNEFI
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFI 61
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 157 LDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
D N DG +S SE+T A+ G S + + E+D D +G ++F EF+
Sbjct: 11 FDTNGDGKISLSELTDALRTLGSTSADEVQ-RMMAEIDTDGDGFIDFNEFI 60
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
IF++FD + +G I EL L + +E+ + D + D + FNEFI
Sbjct: 7 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFI 60
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKF 112
+D +RN F FDE+++G I + L++ + +FT+EE+++++ I+K +
Sbjct: 75 EDVIRNA---FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNY 131
Query: 113 NEFIVLL 119
EF +L
Sbjct: 132 VEFTRIL 138
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNF 203
++ + +AF +D+N+DG++ + ++ + G+ T + E M + G +NF
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTD----EYLEGMMSEAPGPINF 58
Query: 204 KEFLFAF 210
FL F
Sbjct: 59 TMFLTMF 65
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAV-----TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
AF D ++DG +SR EM Q + + E IA + +E D D +G V+F EF
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ + F+ FD D GTID +ELK L + +EEI + D M F +F+
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 117 VLLC 120
++
Sbjct: 91 TVMT 94
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 146 TFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKE 205
T E L D F DKN DGY+ E+ + +GE T + ++ D + +G +++ E
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 206 FL 207
FL
Sbjct: 73 FL 74
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 20 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 150 LVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFA 209
L +AF DK +GY+S M + + E E + +E+D D +G V+F+EF+
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 210 FT 211
T
Sbjct: 65 MT 66
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 42 FNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEIND---- 97
F I +F D + +F FD D NG ID +E L + + E+ND
Sbjct: 48 FQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEF---ICALSVT-SRGELNDKLIW 103
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDA-FVF 156
F+ D++ + + ++E + ++ +Y + S + +P+ E T E V+ F
Sbjct: 104 AFQLYDLDNNGLISYDEMLRIVDAIYKM--------VGSMVKLPEDEDTPEKRVNKIFNM 155
Query: 157 LDKNKDGYVSRSEMTQA 173
+DKNKDG ++ E +
Sbjct: 156 MDKNKDGQLTLEEFCEG 172
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
F D +K+GY+ E A++ + G I F+ D D NG++++ E L
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 163 GYVSRSEMTQAVTESGE-GSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFT 211
G++++SE + + G A F D DKNG ++FKEF+ A +
Sbjct: 41 GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALS 90
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ L +AF DK +GY+S M + + E E + +E+D D +G V+F+EF+
Sbjct: 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Query: 208 FAFT 211
T
Sbjct: 151 GVMT 154
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 146 TFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKE 205
T E L D F DKN DGY+ E+ + +GE T + ++ D + +G +++ E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 206 FL 207
FL
Sbjct: 68 FL 69
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 157 LDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
DKNKDG +S E + T +K FEE+D D NG +N EF
Sbjct: 10 FDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
+ K +FEKFD++ +G + +E ++ FT+E+I FE D++ + + +EF
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
KA F+ FD D G I + L L T+EE++ + E D + + F EF+V+
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM- 81
Query: 120 CLVYLLKDDP 129
+V +K+D
Sbjct: 82 -MVRQMKEDA 90
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 153 AFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
AF D + G +S + + G+ T EE+D D +G ++F+EFL R
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 213 W 213
Sbjct: 85 Q 85
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
LF A D + +KF +F+ L ++ LR E L F
Sbjct: 94 LFNAFDTTQTGSVKFEDFVTALSIL---------LRG----------TVHEKLRWTFNLY 134
Query: 158 DKNKDGYVSRSEMTQAVTESGE--GSTGRIAIKR----------FEEMDWDKNGMVNFKE 205
D NKDGY+++ EM V + G +K F++MD +K+G+V E
Sbjct: 135 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 194
Query: 206 FL 207
FL
Sbjct: 195 FL 196
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 11/139 (7%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
++F I +F D+ +F FD G++ E+ L E++ F
Sbjct: 72 ETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTF 131
Query: 100 EACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKL-EATFETLVDAFVF-L 157
DINKD + E + ++ +Y + + P L E T VD F +
Sbjct: 132 NLYDINKDGYINKEEMMDIVKAIYDM---------MGKYTYPVLKEDTPRQHVDVFFQKM 182
Query: 158 DKNKDGYVSRSEMTQAVTE 176
DKNKDG V+ E ++ E
Sbjct: 183 DKNKDGIVTLDEFLESCQE 201
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L D F DKN DGY+ E+ + +GE T + ++ D + +G +++ EFL
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L D F DKN DGY+ E+ + +GE T + ++ D + +G +++ EFL
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID +ELK TE++I +L + D N D + ++EF+
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 60 KAIFEKFDEDS-NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
KA F+ F +D+ +G I +EL K L T EE+ ++ + D + + F+EF+V+
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 119 LCLVYLLKDD 128
+V +KDD
Sbjct: 81 --MVRCMKDD 88
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
E L D F DKN DGY+ E+ + +GE T + ++ D + +G +++ EFL
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+F FD++++G ID EELK TE++I +L + D N D + ++EF+
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 60 KAIFEKFDEDS-NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
KA F+ F +D+ +G I +EL K L T EE+ ++ + D + + F+EF+V+
Sbjct: 21 KAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 119 LCLVYLLKDD 128
+V +KDD
Sbjct: 81 --MVRCMKDD 88
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 31/122 (25%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
LF A D + +KF +F+ L ++ LR KL TF
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSIL---------LRGTVH---EKLRWTFN-------LY 98
Query: 158 DKNKDGYVSRSEMTQAVTESGE--GSTGRIAIKR----------FEEMDWDKNGMVNFKE 205
D NKDGY+++ EM V + G +K F++MD +K+G+V E
Sbjct: 99 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 158
Query: 206 FL 207
FL
Sbjct: 159 FL 160
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 7/136 (5%)
Query: 41 SFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFE 100
+F I +F D+ +F FD G++ E+ L E++ F
Sbjct: 37 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 96
Query: 101 ACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKN 160
DINKD + E + ++ +Y + T K ++ F+ +DKN
Sbjct: 97 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQK-------MDKN 149
Query: 161 KDGYVSRSEMTQAVTE 176
KDG V+ E ++ E
Sbjct: 150 KDGIVTLDEFLESCQE 165
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 52 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 105
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKD 127
+G ID ELK+ + +++ + L D + F++FI ++ L D
Sbjct: 106 SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD 162
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 34 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 87
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKD 127
+G ID ELK+ + +++ + L D + F++FI ++ L D
Sbjct: 88 SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD 144
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKK-CFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIV 117
+A+F++ D + +G++ +EE+K K IK E+ + +F+A DI+ + + EF
Sbjct: 2 AEALFKQLDANGDGSVSYEEVKAFVSSKRPIK-NEQLLQLIFKAIDIDGNGEIDLAEFTK 60
Query: 118 LLCLV--YLLKDDPTALR-------AKSRMGMPKLEAT-------FETLVDAFVFLDKNK 161
V L D+ L+ A + K E T +E +VD + D N
Sbjct: 61 FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANG 120
Query: 162 DGYVSRSE 169
DGY++ E
Sbjct: 121 DGYITLEE 128
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 18/151 (11%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ + F+ FD D GTID +ELK L + +EEI D F +F+
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFL 90
Query: 117 VLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTE 176
+ KD T E ++ AF D ++ G +S + + E
Sbjct: 91 TVXTQKXSEKD------------------TKEEILKAFKLFDDDETGKISFKNLKRVAKE 132
Query: 177 SGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
GE T + +E D D +G V+ +EFL
Sbjct: 133 LGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 53 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 106
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+G ID ELK+ + +++ + L D + F++FI
Sbjct: 107 SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 152
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 30 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 83
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKD 127
+G ID ELK+ + +++ + L D + F++FI ++ L D
Sbjct: 84 SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD 140
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 31 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 84
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKD 127
+G ID ELK+ + +++ + L D + F++FI ++ L D
Sbjct: 85 SGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD 141
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLV 122
F D+ NGT+ E+ ++ + IN F + + F F+ L
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFSEGEDQ----VNFRGFMRTLAHF 90
Query: 123 YLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAV-----TES 177
++D+ ++K G L + L AF D +KD +SR E+ Q +
Sbjct: 91 RPIEDNE---KSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNI 147
Query: 178 GEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ G IA + +E D D + ++F EF+
Sbjct: 148 SDEQLGSIADRTIQEADQDGDSAISFTEFV 177
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 31/122 (25%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
LF A D + +KF +F+ L ++ LR KL TF
Sbjct: 58 LFNAFDTTQTGSVKFEDFVTALSIL---------LRGTVH---EKLRWTFN-------LY 98
Query: 158 DKNKDGYVSRSEM---TQAVTESGEGSTGRIAIKR---------FEEMDWDKNGMVNFKE 205
D NKDGY+++ EM +A+ + T + + F++MD +K+G+V E
Sbjct: 99 DINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDE 158
Query: 206 FL 207
FL
Sbjct: 159 FL 160
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 41 SFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFE 100
+F I +F D+ +F FD G++ E+ L E++ F
Sbjct: 37 TFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 96
Query: 101 ACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKL-EATFETLVDAFVF-LD 158
DINKD + E + ++ +Y + T P L E T VD F +D
Sbjct: 97 LYDINKDGYINKEEMMDIVKAIYDMMGAYT---------YPVLAEDTPRQHVDVFFQKMD 147
Query: 159 KNKDGYVSRSEMTQAVTE 176
KNKDG V+ E ++ E
Sbjct: 148 KNKDGIVTLDEFLESCQE 165
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 60 KAIFEKFDEDS-NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
KA F+ F + + +G I +EL K L T EE+ ++ + D + + F+EF+V+
Sbjct: 21 KAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Query: 119 LCLVYLLKDD 128
+V +KDD
Sbjct: 81 --MVRCMKDD 88
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 34 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 87
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKD 127
+G ID ELK+ + +++ + L D + F++FI ++ L D
Sbjct: 88 SGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTD 144
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D +E H T +++ F
Sbjct: 46 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAF 105
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 106 SLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D +E H T +++ F
Sbjct: 46 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAF 105
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 106 SLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D +E H T +++ F
Sbjct: 47 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAF 106
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 107 SLYDVDGNGTISKNEVLEIVTAIF 130
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 52 IDDSLRNCKAIFEKFD--EDSNGTIDHEELKKCFHK---LEIKFTEEEINDLFEACDINK 106
+D ++ AIF K+ E T+ +ELK+ K + K + EI L E D NK
Sbjct: 5 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNK 64
Query: 107 DMGMKFNEFIVL---LCLVY 123
D + F E++ L L+Y
Sbjct: 65 DQEVNFQEYVTFLGALALIY 84
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLV 122
F D+ NGT+ E+ ++ + IN F + + F F+ L
Sbjct: 35 FTSLDKGENGTLSREDFQRIPELAINPLGDRIINAFFPEGEDQ----VNFRGFMRTLAHF 90
Query: 123 YLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAV-----TES 177
++D+ ++K G L + L AF D +KD +SR E+ Q +
Sbjct: 91 RPIEDNE---KSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNI 147
Query: 178 GEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ G IA + +E D D + ++F EF+
Sbjct: 148 SDEQLGSIADRTIQEADQDGDSAISFTEFV 177
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 47 LKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINK 106
K P +++ + +A+F FD + + TID E + + E ++ F+ D ++
Sbjct: 49 FKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDR 108
Query: 107 DMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVS 166
+ + E + ++ +Y LK + + G KL E + F+ +D+N DG +S
Sbjct: 109 NGCIDRQELLDIVESIYKLKKACSVEVEAEQQG--KLLTPEEVVDRIFLLVDENGDGQLS 166
Query: 167 RSEMTQAV 174
+E +
Sbjct: 167 LNEFVEGA 174
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 22/114 (19%)
Query: 63 FEKFDED-SNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCL 121
++KF E+ +GT+ E K+ F + + + + +F A D N D + F E++ L L
Sbjct: 28 YKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNL 87
Query: 122 VYLLKDDPTALRAKSRMGMPKLEATFE-TLVDAFVFLDKNKDGYVSRSEMTQAV 174
V L T E L F DK+++G + R E+ V
Sbjct: 88 V--------------------LRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIV 121
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (or Apo) Human S100a6
Length = 90
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 52 IDDSLRNCKAIFEKFD--EDSNGTIDHEELKKCFHK---LEIKFTEEEINDLFEACDINK 106
+D ++ AIF K+ E T+ +ELK+ K + K + EI L E D NK
Sbjct: 5 LDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNK 64
Query: 107 DMGMKFNEFIVLLCLVYLLKDDP 129
D + F E++ L + L+ ++
Sbjct: 65 DQEVNFQEYVTFLGALALIYNEA 87
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D +E H T +++ F
Sbjct: 46 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAF 105
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 106 SLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
L + F FD D +GT+D +EL+K + + + + +N + + N + F+++
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
Query: 116 IVLLCLVYLLKD 127
I + L D
Sbjct: 160 IACCVKLRALTD 171
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 150 LVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKR-FEEMDWDKNGMVNFKEFLF 208
L DAF D N DG +S SE+ +A+ + G I+ ++D + +G V+F+EF+
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 68
Query: 209 AFTR 212
+R
Sbjct: 69 MMSR 72
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 55 SLRNCKAIFEKFDEDSNGTIDHEELKKCFHK-LEIKFTEEEINDLFEACDINKDMGMKFN 113
++ + F +FD + +G I EL++ K L + +I ++ D+N D + F
Sbjct: 5 GVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
Query: 114 EFIVLLC 120
EF+ ++
Sbjct: 65 EFVRMMS 71
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 142 KLEATFET--LVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEE------- 192
KL + ET L D F +DKN DG + R E+ ++ + + E
Sbjct: 338 KLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILG 397
Query: 193 -MDWDKNGMVNFKEFL 207
D+D+NG +++ EF+
Sbjct: 398 AADFDRNGYIDYSEFV 413
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCF--HKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
+ F+KFD+D NG I +EL F LE K +E I+ D N D + F EF
Sbjct: 430 SAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMIS----GIDSNNDGDVDFEEF 482
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 18/81 (22%)
Query: 141 PKLEATFET--LVDAFVFLDKNKDGYVSRSEMTQAVTE-SGEGSTGRIAIKRFEEM---- 193
KL + ET L D F +DKN DG + R E+ ++ SGE +A+ ++
Sbjct: 54 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGE----EVAVFDLPQIESEV 109
Query: 194 -------DWDKNGMVNFKEFL 207
D+D+NG +++ EF+
Sbjct: 110 DAILGAADFDRNGYIDYSEFV 130
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCF--HKLEIKFTEEEINDLFEACDINKDMGMKFNEF-- 115
++ F+KFD+D NG I +EL F LE K +E I+ D N D + F EF
Sbjct: 146 ESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMIS----GIDSNNDGDVDFEEFCK 201
Query: 116 -IVLLC 120
I LC
Sbjct: 202 MIQKLC 207
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 33/163 (20%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEAC-DINKDMGMKF 112
D L K FE FD +G I L+ C D+ + +G
Sbjct: 7 DQLEEFKEAFELFDRVGDGKI-----------------------LYSQCGDVMRALGQNP 43
Query: 113 NEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEA--------TFETLVDAFVFLDKNKDGY 164
VL L D+ + R +P L+A T+E ++ F DK +G
Sbjct: 44 TNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGK 103
Query: 165 VSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
V +E+ +T GE T ++ D NG +N++ FL
Sbjct: 104 VMGAELRHVLTTLGEKMTEE-EVETVLAGHEDSNGCINYEAFL 145
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
F+ FD+D+ G I EL+ L K + EE+++L + + KD + +++F+ ++
Sbjct: 82 FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMI 137
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
+G I +EL K L T EE+ ++ + D + + F+EF+V+ +V +KDD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRCMKDD 88
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D ++ H T +++ F
Sbjct: 46 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAF 105
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 106 SLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 39/84 (46%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F +I KF D + +F FD +S+GT+D ++ H T +++ F
Sbjct: 46 QEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAF 105
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 106 SLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI-VLL 119
A+F+ FD+D +GTI +E K I +EE+ F+ CD++ + +E L
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMTRQHL 176
Query: 120 CLVYLLKDDPTA 131
Y L DP A
Sbjct: 177 GFWYTL--DPEA 186
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVR 83
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
+G+I +EL K L T EE+ ++ + D + + F+EF+V+ +V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDD 88
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
+G+I +EL K L T EE+ ++ + D + + F+EF+V+ +V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDD 88
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 155 VFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFLFAFTR 212
+F+ +DG +S E+ + + G+ T + +E+D D +G V+F EFL R
Sbjct: 26 IFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 83
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 71 NGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
+G+I +EL K L T EE+ ++ + D + + F+EF+V+ +V +KDD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDD 88
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++EE++++ D+ +D+ +K+ EF+
Sbjct: 91 FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 146
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ +AI+++FD D +GTI EL F E N + ++
Sbjct: 79 EFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYS-DES 137
Query: 108 MGMKFNEFIVLLCLVYL 124
M F+ FI CLV L
Sbjct: 138 GNMDFDNFIS--CLVRL 152
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++EE++++ D+ +D+ +K+ EF+
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++EE++++ D+ +D+ +K+ EF+
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 40 KSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+ F SI KF D + +F FD + +GT+D +E H T +++ F
Sbjct: 54 QQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAF 113
Query: 100 EACDINKDMGMKFNEFIVLLCLVY 123
D++ + + NE + ++ ++
Sbjct: 114 SLYDVDGNGTISKNEVLEIVXAIF 137
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 44 SIILKFPKI----------DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEE 93
++LKF K+ D + K+ F DED G I E+LKK K +K
Sbjct: 29 GLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-Y 87
Query: 94 EINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDA 153
+ L + D + + + EFI AL K + + + + A
Sbjct: 88 NFDLLLDQIDSDGSGKIDYTEFI------------AAALDRK--------QLSKKLIYCA 127
Query: 154 FVFLDKNKDGYVSRSEMTQAVTESG-EGSTGRIAIKRFEEM--DWDKN--GMVNFKEF 206
F D + DG ++ +E+ + +G+ + + R + M D DKN G ++F EF
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 26 VEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHK 85
+E +R A+E S N I L D A+F+ D+D NG I +E K
Sbjct: 85 IEGWKRLASEELKRYSKNQITLIRLWGD-------ALFDIIDKDQNGAISLDEWKAYTKS 137
Query: 86 LEIKFTEEEINDLFEACDINKDMGMKFNE 114
I + E+ + F CDI++ + +E
Sbjct: 138 AGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL 98
L + F FD D +GT+D +EL+K + + + +N +
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSI 113
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
E L +AF DK+KDGY++ ++ + G T I+ ++++ + G V+F +F
Sbjct: 9 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDF 68
Query: 207 L 207
+
Sbjct: 69 V 69
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 55 SLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEI---KFTEEEINDLFEACDINKDMGMK 111
S K IF D D +G +D +ELK K + + TE E L +A D + D +
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Query: 112 FNEF 115
+EF
Sbjct: 99 ADEF 102
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 56 LRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
L + F D D +GT+D +EL+K + + + + +N + + N + F+++
Sbjct: 102 LNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFDDY 159
Query: 116 IVLLCLVYL 124
I C V L
Sbjct: 160 IA--CCVKL 166
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDW---DKNGM 200
E E +AF +D+N DG + + ++ + + GR+ +K EE+D + +G
Sbjct: 21 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFA-----AMGRLNVKN-EELDAMIKEASGP 74
Query: 201 VNFKEFLFAF 210
+NF FL F
Sbjct: 75 INFTVFLTMF 84
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 55 SLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEI---KFTEEEINDLFEACDINKDMGMK 111
S K +F D D +G +D EELK K E + TE E L A D + D +
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIG 99
Query: 112 FNEF 115
EF
Sbjct: 100 AEEF 103
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 139 GMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKN 198
G P ATF F D+NKDG + SE QA++ + G+ F+ D D +
Sbjct: 59 GDPTKFATF-----VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDND 113
Query: 199 GMVNFKEFL 207
G + E L
Sbjct: 114 GYITRNEML 122
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 19/77 (24%)
Query: 98 LFEACDINKDMGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFL 157
+F D NKD ++F+EFI AL SR + E L AF
Sbjct: 68 VFNVFDENKDGRIEFSEFI-------------QALSVTSRGTLD------EKLRWAFKLY 108
Query: 158 DKNKDGYVSRSEMTQAV 174
D + DGY++R+EM V
Sbjct: 109 DLDNDGYITRNEMLDIV 125
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDW---DKNGM 200
E E +AF +D+N DG + + ++ + + GR+ +K EE+D + +G
Sbjct: 3 ETEIEDFKEAFTVIDQNADGIIDKDDLRETFA-----AMGRLNVKN-EELDAMIKEASGP 56
Query: 201 VNFKEFLFAF 210
+NF FL F
Sbjct: 57 INFTVFLTMF 66
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDW---DKNGMVNFKEFLF 208
+AF +D+N+DG + + ++ + + GR+ +K EE+D + +G +NF FL
Sbjct: 16 EAFTVIDQNRDGIIDKDDLRETF-----AAMGRLNVKN-EELDAMIKEASGPINFTVFLT 69
Query: 209 AF 210
F
Sbjct: 70 MF 71
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ +AI+++FD D +GTI EL F E + + ++
Sbjct: 68 EFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEG 126
Query: 108 MGMKFNEFIVLLCLVYL 124
M F+ FI CLV L
Sbjct: 127 GNMDFDNFIS--CLVRL 141
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 11 ATSTWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDS 70
+ TW P + + + +M R E A +F+ +F + + + + +F +D D+
Sbjct: 31 SNGTWTPFNPVTVRSIISMFDR--ENKAGVNFS----EFTGVWKYITDWQNVFRTYDRDN 84
Query: 71 NGTIDHEELKKCF--HKLEIKFTE 92
+G ID ELK+ ++L +F +
Sbjct: 85 SGMIDKNELKQALSGYRLSDQFHD 108
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 53 DDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLF 99
+D+LRN F FDED G I + LK + F++EEI +++
Sbjct: 84 EDALRNA---FSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVW 127
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 55 SLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
++ K F D+D +G I E+LK F L ++E+N + + C + F
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQ----LNFTA 69
Query: 115 FIVLLCLVYLLKDDPTALR 133
F+ L D ALR
Sbjct: 70 FLTLFGEKVSGTDPEDALR 88
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F E+
Sbjct: 20 FKAAFDIFVL--GAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMVR 83
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ FD+D +GTI +E K I ++E+ F CD++ + +E
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ FD+D +GTI +E K I ++E+ F CD++ + +E
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1TMO|A Chain A, Trimethylamine N-Oxide Reductase From Shewanella Massilia
Length = 829
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 56/141 (39%), Gaps = 24/141 (17%)
Query: 75 DHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYLLKDDPT--AL 132
D +K+ FHKLE T D+N +F++ ++ C Y D A
Sbjct: 481 DRNRMKQAFHKLECVVT----------VDVNWTATCRFSDIVLPACTTYERNDIDVYGAY 530
Query: 133 RAKSRMGMPKL-EATFETLVDAFVF------LDKNKDGYVSRSEMTQAVT---ESGEGST 182
+ + M K+ E F++L D +F L K K+ + EM T E +
Sbjct: 531 ANRGILAMQKMVEPLFDSLSDFEIFTRFAAVLGKEKEYTRNMGEMEWLETLYNECKAANA 590
Query: 183 GRIAIKRFEEMDWDKNGMVNF 203
G+ + F W K G V+F
Sbjct: 591 GKFEMPDFATF-W-KQGYVHF 609
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 147 FETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F+ D FV +DG +S E+ + + G+ T + +E+D D +G V+F E+
Sbjct: 20 FKAAFDIFVL--GAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 207 LFAFTR 212
L R
Sbjct: 78 LVMMAR 83
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D ++ F+K D D++G++ EE +L+ + + D+F D + + + F
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFK 72
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EFI + + D LR AF D +KDGY+S E+ Q
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRF------------------AFRIYDMDKDGYISNGELFQV 114
Query: 174 V-----TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
+ + +I K D D +G ++F+EF
Sbjct: 115 LKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMG--MKFNEFIV 117
KA F+ FD D G I +EL L T+ E++ + C++++D + F EF+V
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAII--CEVDEDGSGTIDFEEFLV 80
Query: 118 LLCLVYLLKDDP 129
+ +V +K+D
Sbjct: 81 M--MVRQMKEDA 90
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTE-EEINDLFEACDINKDMGMKFNEFIVLLC 120
+F++ D N +D EE K+ KLE + E+ LF+ D N + F+EF
Sbjct: 135 MFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWAS 194
Query: 121 LVYLLKD-DP 129
V L D DP
Sbjct: 195 AVKLDADGDP 204
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 38/143 (26%)
Query: 62 IFEKFDEDSNGTIDHEEL-KKCFHKLEIKFTEEEINDLFE-ACDINKDMGMK-------- 111
+F+KFD++ G + ++E+ C L++ + D+ + A D ++ +G K
Sbjct: 53 LFKKFDKNETGKLXYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSED 112
Query: 112 ---FNEFIVLLCLVY-----------------LLKDDPTALRAKSRMGMPKLEATFETLV 151
F EF ++LC +Y +L D+ RA +PKLEA +
Sbjct: 113 FVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRA-----VPKLEAWGAKVE 167
Query: 152 DA---FVFLDKNKDGYVSRSEMT 171
D F LDKN G V+ E
Sbjct: 168 DPAALFKELDKNGTGSVTFDEFA 190
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D ++ F+K D D++G++ EE +L+ + + D+F D + + + F
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFK 73
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EFI + + D LR AF D +KDGY+S E+ Q
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRF------------------AFRIYDMDKDGYISNGELFQV 115
Query: 174 V-----TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
+ + +I K D D +G ++F+EF
Sbjct: 116 LKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 55 SLRNCKAIFEKFDEDSNGTIDHEELK---KCFHKLEIKFTEEEINDLFEACDINKDMGMK 111
S + K +F+ D D++G I+ EELK K F T+ E +A D + D +
Sbjct: 40 SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIG 99
Query: 112 FNEFIVLL 119
+EF L+
Sbjct: 100 IDEFETLV 107
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ FD+D +GTI +E K I ++E+ F CD++ + +E
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ FD+D +GTI +E K I ++E+ F CD++ + +E
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D ++ F+K D D++G++ EE +L+ + + D+F D + + + F
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFK 59
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EFI + + D LR AF D +KDGY+S E+ Q
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRF------------------AFRIYDMDKDGYISNGELFQV 101
Query: 174 V-----TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
+ + +I K D D +G ++F+EF
Sbjct: 102 LKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 27/158 (17%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFN 113
D ++ F+K D D++G++ EE +L+ + + D+F D + + + F
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFM-SLPELQQNPLVQRVIDIF---DTDGNGEVDFK 58
Query: 114 EFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEMTQA 173
EFI + + D LR AF D +KDGY+S E+ Q
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRF------------------AFRIYDMDKDGYISNGELFQV 100
Query: 174 V-----TESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
+ + +I K D D +G ++F+EF
Sbjct: 101 LKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 138
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 146 TFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKE 205
T E ++ AF D ++ G +S + + E GE T + +E D D +G V+ +E
Sbjct: 9 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 68
Query: 206 FL 207
FL
Sbjct: 69 FL 70
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
F+ FD+D G I + LK+ +L T+EE+ ++ + D + D + EF+ ++
Sbjct: 17 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A Resolution
Length = 98
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 78 ELKKCFHKLEIKFTEEEIND-----LFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
E+K+ HK F E++++ L + D N D + F E+ V L L+ ++ +D
Sbjct: 34 EMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALITVMSND 89
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2JTT|A Chain A, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
pdb|2JTT|B Chain B, Solution Structure Of Calcium Loaded S100a6 Bound To C-
Terminal Siah-1 Interacting Protein
Length = 90
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 52 IDDSLRNCKAIFEKFD--EDSNGTIDHEELKKCFHK---LEIKFTEEEINDLFEACDINK 106
+D ++ IF K+ E T+ +ELK+ K + K + EI L + D NK
Sbjct: 5 LDQAIGLLIGIFHKYSGKEGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNK 64
Query: 107 DMGMKFNEFIVLL 119
D + F E+I L
Sbjct: 65 DQEVNFQEYITFL 77
>pdb|2KAX|A Chain A, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAX|B Chain B, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAY|A Chain A, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|2KAY|B Chain B, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|4DIR|A Chain A, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
pdb|4DIR|B Chain B, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
Length = 92
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 52 IDDSLRNCKAIFEKFD--EDSNGTIDHEELKKCFHKLEI---KFTEEEINDLFEACDINK 106
++ +L F K+ E S T+ +ELK+ K E+ + E I+DL ++ D N
Sbjct: 5 LEKALTTMVTTFHKYSGREGSKLTLSRKELKELIKK-ELCLGEMKESSIDDLMKSLDKNS 63
Query: 107 DMGMKFNE---FIVLLCLVY 123
D + F E F+ +LC+ Y
Sbjct: 64 DQEIDFKEYSVFLTMLCMAY 83
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ FD+D +GTI +E K I ++E+ F CD++ + +E
Sbjct: 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 154 FVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F D N DG +S SE+ A+ G + + + E+D D +G ++F EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGSVTPDEVR-RMMAEIDTDGDGFISFDEF 68
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
IF++FD + +G I EL L T +E+ + D + D + F+EF
Sbjct: 16 IFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ D+D NG I +E K I + E+ + F CDI++ + +E
Sbjct: 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 146 TFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKE 205
T E ++ AF D ++ G +S + + E GE T + +E D D +G V+ +E
Sbjct: 19 TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQE 78
Query: 206 FL 207
FL
Sbjct: 79 FL 80
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
F+ FD+D G I + LK+ +L T+EE+ ++ + D + D + EF+ ++
Sbjct: 27 FKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
E L+ F D N GY+++S+M +T G+ T + AI + N +++K F
Sbjct: 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--IDYKLF 140
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 139
Query: 202 NFKEFL 207
+++F+
Sbjct: 140 KYEDFV 145
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 61 AIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
A+F+ D+D NG I +E K I + E+ + F CDI++ + +E
Sbjct: 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 36/159 (22%)
Query: 62 IFEKFDEDSNGTIDHEE-LKKCFHKLEI-KFTEEEINDLFEACDINKDMGMK-------- 111
+F++FD + G + E L C+ L++ +FT + + A D KD+G K
Sbjct: 56 LFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEED 115
Query: 112 ---FNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRS 168
F EF ++LC +Y + FE V F +DK+ +
Sbjct: 116 LVEFLEFRLMLCYIYDI---------------------FELTV-MFDTMDKDGSLLLELQ 153
Query: 169 EMTQAVTESGE-GSTGRIAIKRFEEMDWDKNGMVNFKEF 206
E +A+ + E G A F E+D + +G+V F EF
Sbjct: 154 EFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 139
Query: 202 NFKEFL 207
+++F+
Sbjct: 140 KYEDFV 145
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 145 ATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFK 204
A E V AF DK G VS ++ +T GE T + + ++ D NG +++K
Sbjct: 2 AKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK 61
Query: 205 EFL 207
+F+
Sbjct: 62 KFI 64
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 148 ETLVDAFVFLDKNKDGYVSRSEMTQAVTESG 178
E L +AF DKN DGY+ E+ + + +G
Sbjct: 5 EELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 88 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 143
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 78 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 137
Query: 202 NFKEFL 207
+++F+
Sbjct: 138 KYEDFV 143
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 78 ELKKCFHKLEIKFTEEEIND-----LFEACDINKDMGMKFNEFIVLLCLVYLLKDD 128
E+K+ HK F E++++ L + D N D + F E+ V L L+ ++ +D
Sbjct: 34 EMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALITVMSND 89
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 90 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 80 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 139
Query: 202 NFKEFL 207
+++F+
Sbjct: 140 KYEDFV 145
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 87 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 77 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 136
Query: 202 NFKEFL 207
+++F+
Sbjct: 137 KYEDFV 142
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 21/157 (13%)
Query: 54 DSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMK-- 111
D + + K F FD + I ++ L T EIN + ++M K
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKIL-GNPSKEEMNAKKI 59
Query: 112 -FNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVSRSEM 170
F EF+ +L KD + TFE V+ DK +G V +E+
Sbjct: 60 TFEEFLPMLQAAANNKD----------------QGTFEDFVEGLRVFDKEGNGTVMGAEL 103
Query: 171 TQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEFL 207
+ GE T + + + D NG +N++ F+
Sbjct: 104 RHVLATLGEKMTEEEVEELMKGQE-DSNGCINYEAFV 139
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 32 RAAEGTALKSFNSIILKFPK------IDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHK 85
+A + L+ N L PK + L K + +FD + NG ID LK+ K
Sbjct: 17 KAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK 76
Query: 86 LEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLC 120
L + T E+ L + +++F+ ++
Sbjct: 77 LGVPKTHLELKRLIREVSSGSEETFSYSDFLRMML 111
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 63 FEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDM--GMKFNEFI 116
F+ FD + G I EL+ L + ++E+++++ + D+ +D+ +K+ +F+
Sbjct: 87 FKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 142
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 144 EATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIA--IKRFEEMDWDKNGMV 201
+ TF ++AF D+ G++S +E+ +T GE + I + ++ D G V
Sbjct: 77 QGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNV 136
Query: 202 NFKEFL 207
+++F+
Sbjct: 137 KYEDFV 142
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ + I+++FD D +GTI EL F + I + ++
Sbjct: 79 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDET 137
Query: 108 MGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYV 165
M F+ FI CLV +L+A F AF LDKN G +
Sbjct: 138 GNMDFDNFIS--CLV-------------------RLDAMFR----AFRSLDKNGTGQI 170
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 154 FVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMVNFKEF 206
F D N DG +S +E+ +A+ G + + E+D D +G ++F+EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGSITPDEVK-HMMAEIDTDGDGFISFQEF 66
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 62 IFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
IF++FD + +G I EL + L T +E+ + D + D + F EF
Sbjct: 14 IFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 63 FEKFDEDSNGTIDHEELKK-CFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
FE FD TI EE + C +++I T+E+ + L+ +N +K+ +F+
Sbjct: 30 FENFDTMKTNTISREEFRAICNRRVQI-LTDEQFDRLWNEMPVNAKGRLKYPDFL 83
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 26/119 (21%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ + I+++FD D +GTI EL F + I + ++
Sbjct: 68 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDET 126
Query: 108 MGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYVS 166
M F+ FI CLV +L+A F AF LDKN G +
Sbjct: 127 GNMDFDNFIS--CLV-------------------RLDAMFR----AFRSLDKNGTGQIQ 160
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 21 LEAKMVEAMQR--RAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEE 78
L AK +E+ +AA+ KSF S + K D + K +F D+D +G I+ EE
Sbjct: 7 LSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQI---KKVFGILDQDKSGFIEEEE 63
Query: 79 LK---KCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
L+ K F T E A D + D + EF L+
Sbjct: 64 LQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV 107
>pdb|3EBC|A Chain A, Structure Of N141a Hincii With Cognate Dna
pdb|3EBC|B Chain B, Structure Of N141a Hincii With Cognate Dna
Length = 317
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 26/167 (15%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL-FEACDINKDMGMKFNEFI 116
N I +K +GT+ + F KL KF +E ++DL F+ + D+ MK N I
Sbjct: 14 NSILIGQKVKRPKSGTLSGHAAGEPFEKLVYKFLKENLSDLTFKQYEYLNDLFMK-NPAI 72
Query: 117 VLLCLVYLLKDDPTAL----RAKSRMGMPKLEATFE----------TLVDAFVFLDKNKD 162
+ Y L + PT L R K+ +E FE + D F L K
Sbjct: 73 IGHEARYKLFNSPTLLFLLSRGKAATENWSIENLFEEKQNDTADILLVKDQFYELLDVKT 132
Query: 163 GYVSRSEMTQAVTES---GEGSTGRIAIKRFE-------EMDWDKNG 199
+S+S A+ + + I K F+ E+DW+ NG
Sbjct: 133 RNISKSAQAPAIISAYKLAQTCAKMIDNKEFDLFDINYLEVDWELNG 179
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 152 DAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKR-FEEMDWDKNGMVNFKEFLFAF 210
+AF +D++KDG++S++++ S GR+ ++ + M + G +NF FL F
Sbjct: 61 EAFQLIDQDKDGFISKNDIRATFD-----SLGRLCTEQELDSMVAEAPGPINFTMFLTIF 115
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 56 LRNC-KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
+RN +A+F+ FD+D +G+I +E K I ++E+ F+ CD++ + +E
Sbjct: 114 IRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
Query: 115 FI-VLLCLVYLLKDDPTA 131
L Y L DP A
Sbjct: 174 MTRQHLGFWYTL--DPNA 189
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 21 LEAKMVEAMQR--RAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEE 78
L AK +E+ +AA+ KSF S + K D + K +F D+D +G I+ EE
Sbjct: 6 LSAKDIESALSSCQAADSFNYKSFFSTVGLSSKTPDQI---KKVFGILDQDKSGFIEEEE 62
Query: 79 LK---KCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLL 119
L+ K F T E A D + D + EF L+
Sbjct: 63 LQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLV 106
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELK---KCFHKLEIKFTEEEINDLFEACDINKDMGMKFNE 114
K +FE D+D +G I+ EELK K F + E L A D + D + +E
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 115 FIVLLC 120
F ++
Sbjct: 102 FAKMVA 107
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 55 SLRNCKAIFEKF--DEDSNGTIDHEELKKCFHKLEIKFTE-----EEINDLFEACDINKD 107
S K+IFEK+ E + EELK+ ++ +F ++DLF+ D N D
Sbjct: 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQL---IQAEFPSLLKGPRTLDDLFQELDKNGD 61
Query: 108 MGMKFNEFIVLL 119
+ F EF VL+
Sbjct: 62 GEVSFEEFQVLV 73
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 142 KLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMV 201
K + TFE V+ DK +G V +E+ + GE T + + + D NG +
Sbjct: 77 KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCI 135
Query: 202 NFKEFL 207
N++ F+
Sbjct: 136 NYEAFV 141
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 140 MPKLEATFETLVDAF--VFLDKNKDGYVSRSEMTQAV-TESGEGSTGRIAIKRFEEMDWD 196
+ +LE +++D + L K V R ++ + + TES + + A F+E+D +
Sbjct: 2 LTELEKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDIN 61
Query: 197 KNGMVNFKEFLFAFTR 212
+G VNF+EFL +
Sbjct: 62 TDGAVNFQEFLILVIK 77
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 142 KLEATFETLVDAFVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIKRFEEMDWDKNGMV 201
K + TFE V+ DK +G V +E+ + GE T + + + D NG +
Sbjct: 79 KDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQE-DSNGCI 137
Query: 202 NFKEFL 207
N++ F+
Sbjct: 138 NYEAFV 143
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 26/118 (22%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ + I+++FD D +GTI EL F + I + ++
Sbjct: 79 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDET 137
Query: 108 MGMKFNEFIVLLCLVYLLKDDPTALRAKSRMGMPKLEATFETLVDAFVFLDKNKDGYV 165
M F+ FI CLV +L+A F AF LDKN G +
Sbjct: 138 GNMDFDNFIS--CLV-------------------RLDAMFR----AFRSLDKNGTGQI 170
>pdb|1X9F|C Chain C, Hemoglobin Dodecamer From Lumbricus Erythrocruorin
pdb|1X9F|G Chain G, Hemoglobin Dodecamer From Lumbricus Erythrocruorin
pdb|1X9F|K Chain K, Hemoglobin Dodecamer From Lumbricus Erythrocruorin
pdb|2GTL|C Chain C, Lumbricus Erythrocruorin At 3.5a Resolution
pdb|2GTL|G Chain G, Lumbricus Erythrocruorin At 3.5a Resolution
pdb|2GTL|K Chain K, Lumbricus Erythrocruorin At 3.5a Resolution
Length = 153
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 94 EINDLFEACDINKDMGMKFNEFIVLLC----LVYLLKDDPTALRA 134
E+NDLF+ DI G KF+ + + L L DDP AL A
Sbjct: 49 EVNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDA 93
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 57 RNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFI 116
+ K F+ FD + G+ID+ ELK L + EI +L D + + F++F+
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFL 66
Query: 117 VLLC 120
++
Sbjct: 67 DIMT 70
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 13 STWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
T+ P + +++ AM R + T FN+ F ++ +L K F D+D +G
Sbjct: 32 GTYSPFSLETCRIMIAMLDR--DHTGKMGFNA----FKELWAALNAWKENFMTVDQDGSG 85
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDL 98
T++H EL++ + + + + + +
Sbjct: 86 TVEHHELRQAIGLMGYRLSPQTLTTI 111
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 142 KLEATFET--LVDAFVFLDKNKDGYVSRSEMTQAVTE----SGEGSTGRIAI-------K 188
KL + ET L F DKN DG + R+E+ + E G+ ++ A +
Sbjct: 327 KLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQ 386
Query: 189 RFEEMDWDKNGMVNFKEFL 207
+ +D+DKNG + + EF+
Sbjct: 387 VLDAVDFDKNGYIEYSEFV 405
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 13 STWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNG 72
T+ P + +++ AM R + T FN+ F ++ +L K F D+D +G
Sbjct: 32 GTYSPFSLETCRIMIAMLDR--DHTGKMGFNA----FKELWAALNAWKENFMTVDQDGSG 85
Query: 73 TIDHEELKKCFHKLEIKFTEEEINDL 98
T++H EL++ + + + + + +
Sbjct: 86 TVEHHELRQAIGLMGYRLSPQTLTTI 111
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+A+F++ D + +G + +EE+K K E+ + +F++ D + + + NEF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 119 LCLVYL--LKDDPTALRAKSRM-------GMPKLEAT-------FETLVDAFVFLDKNKD 162
+ L DD L+ ++ + K E T E + + + D N D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 163 GYVSRSEMTQ 172
GY++ E +
Sbjct: 122 GYITLEEFLE 131
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 59 CKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEFIVL 118
+A+F++ D + +G + +EE+K K E+ + +F++ D + + + NEF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 119 LCLVYL--LKDDPTALRAKSRM-------GMPKLEAT-------FETLVDAFVFLDKNKD 162
+ L DD L+ ++ + K E T E + + + D N D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 163 GYVSRSEMTQ 172
GY++ E +
Sbjct: 122 GYITLEEFLE 131
>pdb|2GIG|A Chain A, Alteration Of Sequence Specificity Of The Type Ii
Restriction Endonuclease Hincii Through An Indirect
Readout Mechanism
pdb|2GIG|B Chain B, Alteration Of Sequence Specificity Of The Type Ii
Restriction Endonuclease Hincii Through An Indirect
Readout Mechanism
pdb|2GIH|A Chain A, Q138f Hincii Bound To Cognate Dna Gtcgac And Ca2+
pdb|2GIH|B Chain B, Q138f Hincii Bound To Cognate Dna Gtcgac And Ca2+
pdb|2GII|A Chain A, Q138f Hincii Bound To Cognate Dna Gttaac
pdb|2GII|B Chain B, Q138f Hincii Bound To Cognate Dna Gttaac
pdb|2GIJ|A Chain A, Q138f Hincii Bound To Cognate Dna Gttaac And Ca2+
pdb|2GIJ|B Chain B, Q138f Hincii Bound To Cognate Dna Gttaac And Ca2+
pdb|3E3Y|A Chain A, Q138f Hincii Bound To Gttaac And Cocrystallized With 5 Mm
Ca2+
pdb|3E3Y|B Chain B, Q138f Hincii Bound To Gttaac And Cocrystallized With 5 Mm
Ca2+
pdb|3E40|A Chain A, Q138f Hincii Bound To Gttaac And Cocrystallized With 5 Mm
Ca2+
pdb|3E40|B Chain B, Q138f Hincii Bound To Gttaac And Cocrystallized With 5 Mm
Ca2+
pdb|3E41|A Chain A, Q138f Hincii Bound To Gtcgac And 5 Mm Ca2+
pdb|3E41|B Chain B, Q138f Hincii Bound To Gtcgac And 5 Mm Ca2+
pdb|3E42|A Chain A, Q138f Hincii Bound To Gtcgac And Ca2+ (Cocrystallized)
pdb|3E42|B Chain B, Q138f Hincii Bound To Gtcgac And Ca2+ (Cocrystallized)
pdb|3E43|A Chain A, Q138f Hincii Bound To Gttaac And Cocrystallized With 2.5
Mm Mgcl2
pdb|3E43|B Chain B, Q138f Hincii Bound To Gttaac And Cocrystallized With 2.5
Mm Mgcl2
pdb|3E44|A Chain A, Q138f Hincii Bound To Cleaved Dna (Gtt | Aac) And Mn2+
pdb|3E44|B Chain B, Q138f Hincii Bound To Cleaved Dna (Gtt | Aac) And Mn2+
pdb|3E45|A Chain A, Q138f Hincii Bound To Noncognate Dna (Gtgcac) And Ca2+
pdb|3E45|B Chain B, Q138f Hincii Bound To Noncognate Dna (Gtgcac) And Ca2+
Length = 257
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL-FEACDINKDMGMKFNEFI 116
N I +K +GT+ + F KL KF +E ++DL F+ + D+ MK N I
Sbjct: 11 NSILIGQKVKRPKSGTLSGHAAGEPFEKLVYKFLKENLSDLTFKQYEYLNDLFMK-NPAI 69
Query: 117 VLLCLVYLLKDDPTALRAKSR 137
+ Y L + PT L SR
Sbjct: 70 IGHEARYKLFNSPTLLFLLSR 90
>pdb|2AUD|A Chain A, Unliganded Hincii
Length = 257
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL-FEACDINKDMGMKFNEFI 116
N I +K +GT+ + F KL KF +E ++DL F+ + D+ MK N I
Sbjct: 11 NSILIGQKVKRPKSGTLSGHAAGEPFEKLVYKFLKENLSDLTFKQYEYLNDLFMK-NPAI 69
Query: 117 VLLCLVYLLKDDPTALRAKSR 137
+ Y L + PT L SR
Sbjct: 70 IGHEARYKLFNSPTLLFLLSR 90
>pdb|1KC6|A Chain A, Hincii Bound To Cognate Dna
pdb|1KC6|B Chain B, Hincii Bound To Cognate Dna
pdb|1KC6|C Chain C, Hincii Bound To Cognate Dna
pdb|1KC6|D Chain D, Hincii Bound To Cognate Dna
pdb|1TW8|A Chain A, Hincii Bound To Ca2+ And Cognate Dna Gtcgac
pdb|1TW8|B Chain B, Hincii Bound To Ca2+ And Cognate Dna Gtcgac
pdb|1TW8|C Chain C, Hincii Bound To Ca2+ And Cognate Dna Gtcgac
pdb|1TW8|D Chain D, Hincii Bound To Ca2+ And Cognate Dna Gtcgac
pdb|1XHU|A Chain A, Hincii Bound To Cleaved, Cognate Dna Containing Gtcgac
pdb|1XHU|B Chain B, Hincii Bound To Cleaved, Cognate Dna Containing Gtcgac
pdb|1XHU|C Chain C, Hincii Bound To Cleaved, Cognate Dna Containing Gtcgac
pdb|1XHU|D Chain D, Hincii Bound To Cleaved, Cognate Dna Containing Gtcgac
pdb|1XHV|A Chain A, Hincii Bound To Cleaved Cognate Dna Gtcgac And Mn2+
pdb|1XHV|B Chain B, Hincii Bound To Cleaved Cognate Dna Gtcgac And Mn2+
pdb|1XHV|C Chain C, Hincii Bound To Cleaved Cognate Dna Gtcgac And Mn2+
pdb|1XHV|D Chain D, Hincii Bound To Cleaved Cognate Dna Gtcgac And Mn2+
pdb|1TX3|A Chain A, Hincii Bound To Cognate Dna
pdb|1TX3|B Chain B, Hincii Bound To Cognate Dna
pdb|1TX3|C Chain C, Hincii Bound To Cognate Dna
pdb|1TX3|D Chain D, Hincii Bound To Cognate Dna
pdb|2GIE|A Chain A, Hincii Bound To Cognate Dna Gttaac
pdb|2GIE|B Chain B, Hincii Bound To Cognate Dna Gttaac
pdb|2GIE|C Chain C, Hincii Bound To Cognate Dna Gttaac
pdb|2GIE|D Chain D, Hincii Bound To Cognate Dna Gttaac
Length = 257
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 58 NCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL-FEACDINKDMGMKFNEFI 116
N I +K +GT+ + F KL KF +E ++DL F+ + D+ MK N I
Sbjct: 11 NSILIGQKVKRPKSGTLSGHAAGEPFEKLVYKFLKENLSDLTFKQYEYLNDLFMK-NPAI 69
Query: 117 VLLCLVYLLKDDPTALRAKSR 137
+ Y L + PT L SR
Sbjct: 70 IGHEARYKLFNSPTLLFLLSR 90
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 48 KFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKD 107
+F + ++++ + I+++FD D +GTI EL F + I + ++
Sbjct: 75 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN-QHIYSMIIRRYSDET 133
Query: 108 MGMKFNEFIVLLCLVYL 124
M F+ FI CLV L
Sbjct: 134 GNMDFDNFIS--CLVRL 148
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 25 MVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEELKKCFH 84
MV M R L FN + + +RN IF KFD D +G++ E++
Sbjct: 582 MVNLMDRDGNGKLGLVEFNILW-------NRIRNYLTIFRKFDLDKSGSMSAYEMRMAIE 634
Query: 85 KLEIKFTEEEINDLFEACDINKDMGMKFNEFIVLLCLVYL 124
K +++ + A + ++ + F+ F+ CLV L
Sbjct: 635 AAGFKLP-CQLHQVIVARFADDELIIDFDNFV--RCLVRL 671
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 63 FEKFDEDSNGTIDHEELKKCFH---------KLEIKFTEEEINDLFEACDINKDMGMKFN 113
F FD D +GT++ E+L + + +L ++ I+++ E DI++D + +
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 114 EF 115
EF
Sbjct: 195 EF 196
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 63 FEKFDEDSNGTIDHEELKKCFH---------KLEIKFTEEEINDLFEACDINKDMGMKFN 113
F FD D +GT++ E+L + + +L ++ I+++ E DI++D + +
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 114 EF 115
EF
Sbjct: 164 EF 165
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 95 INDLFEACDINKDMGMKFNEFIVLLCL 121
I+++F+ D N+D + F EFI L+ +
Sbjct: 57 IDEIFQGLDANQDEQVDFQEFISLVAI 83
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 95 INDLFEACDINKDMGMKFNEFIVLLCL 121
I+++F+ D N+D + F EFI L+ +
Sbjct: 53 IDEIFQGLDANQDEQVDFQEFISLVAI 79
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 44 SIILKFPKIDDSLRNCKAIFEKFDEDSNGTIDHEEL 79
+ +LKF I + FE +D+D NG ID EL
Sbjct: 178 NFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 213
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 130 TALRAKSRMGMPKLEATFETLVDA-FVFLDKNKDGYVSRSEMTQAVTESGEGSTGRIAIK 188
T K G+ L + V+ F D NKDGY+ E A++ +G +
Sbjct: 33 TLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW 92
Query: 189 RFEEMDWDKNGMVNFKEFL 207
F+ D D NG ++ E L
Sbjct: 93 YFKLYDVDGNGCIDRGELL 111
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 66 FDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL 98
FD++ NGT+ E++ L K TEEE+ L
Sbjct: 93 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 125
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 66 FDEDSNGTIDHEELKKCFHKLEIKFTEEEINDL 98
FD++ NGT+ E++ L K TEEE+ L
Sbjct: 95 FDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 127
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 26.9 bits (58), Expect = 9.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 60 KAIFEKFDEDSNGTIDHEELKKCFHKLEIKFTEEEINDLFEACDINKDMGMKFNEF 115
+A+F++ D + +G + +EE+K K E+ + +F++ D + + + NEF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,242,956
Number of Sequences: 62578
Number of extensions: 243685
Number of successful extensions: 1638
Number of sequences better than 100.0: 326
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 751
Number of HSP's gapped (non-prelim): 720
length of query: 229
length of database: 14,973,337
effective HSP length: 95
effective length of query: 134
effective length of database: 9,028,427
effective search space: 1209809218
effective search space used: 1209809218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)