BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027005
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum
sativum GN=petC PE=2 SV=1
Length = 230
Score = 347 bits (890), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/229 (75%), Positives = 196/229 (85%), Gaps = 2/229 (0%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
SS++LS TPSQLCS K G+ CPS A LVKP RTQM + GMKI CQATSIPADRVPD
Sbjct: 2 SSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPD 61
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+ +NLLLLGA+SLPT MLVPY +F PPG GS+ GGT AKDA+GND++A +WL T
Sbjct: 62 MSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKT 121
Query: 123 HGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQ 182
H PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQ
Sbjct: 122 HAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQ 181
Query: 183 YNNQGRVVRGPAPLSLALAHAN--VENGKVVFVPWTETDFRTGEAPWWA 229
YN+QGRVVRGPAPLSLALAH + VE+GKVVFVPW ETDFRTG+APWW+
Sbjct: 182 YNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230
>sp|P08980|UCRIA_SPIOL Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Spinacia oleracea GN=petC PE=1 SV=2
Length = 230
Score = 335 bits (858), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/229 (76%), Positives = 202/229 (88%), Gaps = 3/229 (1%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQ-MVTKNPM-GMKIKCQATSIPADRV 60
+S +LSSATPSQLCSSK GMF PS A L K R +++K + GMK+ CQATSIPAD V
Sbjct: 2 ASFTLSSATPSQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+ GGT AKDA+GND+IAA+WL
Sbjct: 61 PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
Query: 181 SQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
SQYNNQGRVVRGPAPLSLALAH +V++GKVVFVPWTETDFRTGEAPWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229
>sp|Q69S39|UCRIA_ORYSJ Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza
sativa subsp. japonica GN=petC PE=1 SV=1
Length = 225
Score = 332 bits (850), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/230 (69%), Positives = 183/230 (79%), Gaps = 6/230 (2%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADR 59
MAS++ +++ P+QLC S+ + P + R I CQA +SIPADR
Sbjct: 1 MASTALSTASNPTQLCRSRASLGKPVKGLGFGRERVPRTATT-----ITCQAASSIPADR 55
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMGKRQLMNLLLLGA+SLPT MLVPY FF P G G+AGGG AKD +GND++A +W
Sbjct: 56 VPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEW 115
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCH
Sbjct: 116 LKTHGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 175
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQYNNQGRVVRGPAPLSLAL HA+V++GKV+FVPW ETDFRTG+ PWWA
Sbjct: 176 GSQYNNQGRVVRGPAPLSLALVHADVDDGKVLFVPWVETDFRTGDNPWWA 225
>sp|O49078|UCRIA_FRIAG Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Fritillaria agrestis GN=petC PE=2 SV=1
Length = 230
Score = 323 bits (827), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 164/230 (71%), Positives = 188/230 (81%), Gaps = 1/230 (0%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ ++ TPSQL ++K G + PSRA L K AR K + K+ CQATSIPADRV
Sbjct: 1 MASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDMGKRQ MNLLLLGA+SLPT ML+PY FF PP G GGG AKDA+GNDI+AA WL
Sbjct: 61 PDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWL 120
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHG
Sbjct: 121 KTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHG 180
Query: 181 SQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 229
SQYNNQG+VVRGPAPLSLAL+H ++ E GKVVFVPW ETDFRTGE PWW+
Sbjct: 181 SQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230
>sp|Q7X9A6|UCRIA_WHEAT Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Triticum aestivum GN=petC PE=2 SV=1
Length = 222
Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/228 (66%), Positives = 176/228 (77%), Gaps = 7/228 (3%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P+QLC ++ C KP + + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRV 53
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL
Sbjct: 54 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWL 113
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHG
Sbjct: 114 KTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHG 173
Query: 181 SQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
SQYNNQG+VVRGPAPLSLAL HA+V++GKVVFVPW ETDFRTG+ PWW
Sbjct: 174 SQYNNQGKVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGDNPWW 221
>sp|Q9ZR03|UCRIA_ARATH Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Arabidopsis thaliana GN=petC PE=1 SV=1
Length = 229
Score = 317 bits (813), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/230 (74%), Positives = 195/230 (84%), Gaps = 5/230 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+WL
Sbjct: 60 PDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWL 119
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHG
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHG 179
Query: 181 SQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 229
SQYN QGRVVRGPAPLSLALAHA++ E GKV+FVPW ETDFRTG+APWW+
Sbjct: 180 SQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229
>sp|Q69GY7|UCRIA_SOLTU Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Solanum tuberosum GN=petC PE=2 SV=1
Length = 230
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/232 (73%), Positives = 192/232 (82%), Gaps = 8/232 (3%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS TPSQLCSSK G+ S+A LVKP + + + MG MK KC A SIPAD
Sbjct: 2 ASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPAD 58
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G GT AKDA GND++
Sbjct: 59 DRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVT 118
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICP
Sbjct: 119 EWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICP 178
Query: 178 CHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
CHGSQYNNQG+VVRGPAPLSLALAHA++++GKVVFVPW ETDFRTG++PWWA
Sbjct: 179 CHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230
>sp|Q02585|UCRIB_TOBAC Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic
OS=Nicotiana tabacum GN=petC2 PE=2 SV=1
Length = 228
Score = 298 bits (763), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/232 (73%), Positives = 195/232 (84%), Gaps = 10/232 (4%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ L+KP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPYATFFAPPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICP
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 176
Query: 178 CHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
CHGSQYNNQGRVVRGPAPLSLALAHA++++GKVVFVPW ETDFRTGEAPWWA
Sbjct: 177 CHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228
>sp|P30361|UCRIA_TOBAC Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic
OS=Nicotiana tabacum GN=petC1 PE=2 SV=2
Length = 228
Score = 293 bits (751), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/232 (72%), Positives = 192/232 (82%), Gaps = 10/232 (4%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ LVKP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPY TFF PPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICP
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 176
Query: 178 CHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
CHGSQYNNQGRVVRGPAPLSLALAHA++++GKVVFVPW ETDFRTGE PWWA
Sbjct: 177 CHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228
>sp|B0JXB7|UCRI_MICAN Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis
aeruginosa (strain NIES-843) GN=petC PE=3 SV=1
Length = 179
Score = 248 bits (633), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
+ + VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GN
Sbjct: 2 SQVSGTDVPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
D+I + +L +H GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E
Sbjct: 62 DVIVSQFLTSHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEE 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQYN +G+VVRGPAPLSLALAHANV +N KVVF WTETDFRTGE PWW+
Sbjct: 122 KFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDNDKVVFSTWTETDFRTGEEPWWS 179
>sp|Q9SBN3|UCRIA_VOLCA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Volvox carteri GN=petC PE=2 SV=1
Length = 206
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 33 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF 92
P + Q ++ + ++ A S VPDM KR +MNL+LLG SLP G + + Y FF
Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFF 68
Query: 93 APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASY 152
PP G GG AKDA+GNDI A WL TH GDR+L++GLKGDPTYL+V D T+ Y
Sbjct: 69 VPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKY 128
Query: 153 GINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVV 211
G+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH +V E+G V
Sbjct: 129 GLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVT 188
Query: 212 FVPWTETDFRTGEAPWWA 229
F W+ETDFRTG PWWA
Sbjct: 189 FSTWSETDFRTGLEPWWA 206
>sp|Q5CC93|UCRIA_CYAPA Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle
OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1
Length = 239
Score = 240 bits (613), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 152/214 (71%), Gaps = 13/214 (6%)
Query: 17 SSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGA 76
S + G F P A KPA+ + + C A S D VPDMGKR+LMNLLLLGA
Sbjct: 36 SKQVGSFKPVFA-AAKPAKETTFS-------VSCSAAS---DDVPDMGKRKLMNLLLLGA 84
Query: 77 VSLPTGFMLVPYATFFAPP-GLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK 135
++ P P+ +F PP G AG G AKDA+GND+ + WL TH PGDR+L +GLK
Sbjct: 85 IAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLK 144
Query: 136 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAP 195
GD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+ G+VVRGPAP
Sbjct: 145 GDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAP 204
Query: 196 LSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 228
LSLALAH +V E+G V F PWTETDFRT APWW
Sbjct: 205 LSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWW 238
>sp|A5GMW1|UCRI_SYNPW Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH7803) GN=petC PE=3 SV=1
Length = 178
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 132/177 (74%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL+TH GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 AVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY+ G+VVRGPAPLSLALA+ +VEN V WT+TDFRTGE PWWA
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWWA 178
>sp|P49728|UCRIA_CHLRE Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1
Length = 206
Score = 238 bits (607), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 33 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF 92
PA+ + ++ + ++ A S VPDM KR +MNL+L G LP + + Y FF
Sbjct: 12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFF 68
Query: 93 APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASY 152
PP G GGG AKDA+GNDI A +WL TH GDR+L++GLKGDPTYL+V D T+ Y
Sbjct: 69 VPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKY 128
Query: 153 GINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGKVV 211
G+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH +V E+G V
Sbjct: 129 GLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAESGLVT 188
Query: 212 FVPWTETDFRTGEAPWWA 229
F WTETDFRTG PWWA
Sbjct: 189 FSTWTETDFRTGLEPWWA 206
>sp|Q114L6|UCRI_TRIEI Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium
erythraeum (strain IMS101) GN=petC PE=3 SV=1
Length = 179
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
QA P VP MG+RQ MNLL G V+ L P +F PP G +GGG TAKDA+
Sbjct: 3 QAEGTP--DVPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDAL 60
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSA 170
GNDII +++L H G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +
Sbjct: 61 GNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGS 120
Query: 171 ENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
ENKFICPCHGSQY+N G+VVRGPAPLSLAL HANV + K+VF W ETDFRTGE PWW
Sbjct: 121 ENKFICPCHGSQYDNTGKVVRGPAPLSLALVHANVSDDKLVFTQWEETDFRTGEKPWWV 179
>sp|A5GRU8|UCRI_SYNR3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain RCC307) GN=petC PE=3 SV=1
Length = 178
Score = 237 bits (604), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 128/177 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
D+ A+ WL H GDR+L +GLKGDPTYL+V+ ++ YGINA+CTHLGCVVPWN+ N
Sbjct: 62 DVTASGWLADHKEGDRSLVQGLKGDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY+ G+VVRGPAPLSLALAH NVEN V W+ETDFRT E PWWA
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPLSLALAHVNVENDNVFVSQWSETDFRTDEKPWWA 178
>sp|Q3ALY0|UCRI_SYNSC Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9605) GN=petC PE=3 SV=1
Length = 178
Score = 236 bits (603), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 133/177 (75%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I A+ WL++H GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 PITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY++ G+VVRGPAPLSLALA+ +VEN V WTETDFRTG+ PWWA
Sbjct: 122 KFMCPCHGSQYDSTGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178
>sp|Q7V654|UCRI_PROMM Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9313) GN=petC PE=3 SV=2
Length = 178
Score = 236 bits (602), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 128/176 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
KF+CPCHGSQYN+ G+VVRGPAPLSLALA+ VEN V WTETDFRTGE PWW
Sbjct: 122 KFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177
>sp|A2C7F6|UCRI_PROM3 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9303) GN=petC PE=3 SV=1
Length = 178
Score = 236 bits (602), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 128/176 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
KF+CPCHGSQYN+ G+VVRGPAPLSLALA+ VEN V WTETDFRTGE PWW
Sbjct: 122 KFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177
>sp|Q3AWL7|UCRI_SYNS9 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9902) GN=petC PE=3 SV=1
Length = 178
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 131/177 (74%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T IP+ VP MG+RQ MNLL G+V+ L P A +F PP +GGGTTAKD +GN
Sbjct: 2 TQIPSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVARYFIPPKAAGSGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A WL+TH GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 VVTATGWLSTHPEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY+ G+VVRGPAPLSLALA+ +VE+ V W+ETDFRTG+ PWWA
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPLSLALANVSVEDDNVFVSEWSETDFRTGDKPWWA 178
>sp|P0C8N8|UCRI_THEEB Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus
elongatus (strain BP-1) GN=petC PE=1 SV=1
Length = 180
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 228
GSQY++ G+VVRGPAPLSLAL A V E+ K+VF PWTE DFRTG+ PWW
Sbjct: 130 GSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179
>sp|P0C8N7|UCRI_SYNEL Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus
elongatus GN=petC PE=3 SV=1
Length = 180
Score = 235 bits (600), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWW 228
GSQY++ G+VVRGPAPLSLAL A V E+ K+VF PWTE DFRTG+ PWW
Sbjct: 130 GSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179
>sp|P26292|UCRI_SYNP2 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1
Length = 180
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ +NLL +G + L P +F PP G AGGG AKDA+GNDII +D+
Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L TH GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCH
Sbjct: 70 LQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+VVRGPAPLSLAL HA V E+ K+ F WTETDFRT EAPWWA
Sbjct: 130 GSQYDETGKVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWWA 180
>sp|B8HNR1|UCRI_CYAP4 Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1
Length = 179
Score = 233 bits (595), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 110/169 (65%), Positives = 128/169 (75%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G+ + ML P +F PP G GGG AKDA+GNDI +D+
Sbjct: 10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H DR L +GLKGDPTY+VV+ D T+ YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
GSQY+N G+VVRGPAPLSLALAHA V + K+ F PWTETDFRTG+ PWW
Sbjct: 130 GSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178
>sp|Q9L3P9|UCRIA_ANAVT Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3
SV=1
Length = 179
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 129/170 (75%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+VVRGPAP SLAL+HA EN K+V PWTETDFRTGE PWW+
Sbjct: 130 GSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWWS 179
>sp|Q0I872|UCRI_SYNS3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9311) GN=petC PE=3 SV=1
Length = 178
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 131/177 (74%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN
Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY+ G+VVRGPAPLSLALA+ +V+N V WTETDFRTGE PWW+
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPLSLALANVSVDNDNVFVSQWTETDFRTGEKPWWS 178
>sp|Q5N5B0|UCRI_SYNP6 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC
PE=3 SV=1
Length = 179
Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 129/173 (74%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++
Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66
Query: 117 ADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFIC 176
+ +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF C
Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKC 126
Query: 177 PCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
PCHGSQY+ G+VVRGPAPLSLALAH +V + KV PWTETDFRTG+ PWWA
Sbjct: 127 PCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179
>sp|Q31NV7|UCRI_SYNE7 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus
elongatus (strain PCC 7942) GN=petC PE=3 SV=1
Length = 179
Score = 228 bits (581), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 129/173 (74%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++
Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66
Query: 117 ADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFIC 176
+ +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF C
Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKC 126
Query: 177 PCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
PCHGSQY+ G+VVRGPAPLSLALAH +V + KV PWTETDFRTG+ PWWA
Sbjct: 127 PCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179
>sp|P26290|UCRIB_SYNY3 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=petC2 PE=3 SV=2
Length = 180
Score = 227 bits (579), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P + PP G +GGG TAKDA+GND+ ++
Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDR L +GLKGDPTY+VV+ D T+A+YGINAVCTHLGCVVPWN++ENKF+CPCH
Sbjct: 70 LASHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWNASENKFMCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANV-ENGKVVFVPWTETDFRTGEAPWWA 229
GSQYN +G+VVRGPAPLSLALAHA V ++ K+V WTETDFRT E PWWA
Sbjct: 130 GSQYNAEGKVVRGPAPLSLALAHATVTDDDKLVLSTWTETDFRTDEDPWWA 180
>sp|Q93SX0|UCRIA_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=petC1 PE=1 SV=1
Length = 179
Score = 226 bits (577), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 128/170 (75%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+VVRGPAP SLAL+HA EN K+V WTETDFRTGE PWW+
Sbjct: 130 GSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWWS 179
>sp|Q5CC92|UCRIB_CYAPA Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle
OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1
Length = 241
Score = 226 bits (577), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Query: 32 KPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATF 91
KP I C A S D VPDMGKR+LMNLLLLGA++ PT P+ +F
Sbjct: 45 KPVFAAAKAAKATTFSISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSF 101
Query: 92 FAPP-GLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLA 150
PP G AG G AKDA GNDI WL T PGDR+L +GLKGD TYL+V++D TL
Sbjct: 102 LVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLE 161
Query: 151 SYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANV-ENGK 209
YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+ G+VVRGPAPLSLALAH NV E+G
Sbjct: 162 KYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGV 221
Query: 210 VVFVPWTETDFRTGEAPWW 228
V F PWTETDFRT APWW
Sbjct: 222 VAFEPWTETDFRTNTAPWW 240
>sp|P14698|UCRI_NOSSP Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain
PCC 7906) GN=petC PE=3 SV=1
Length = 179
Score = 224 bits (570), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 127/170 (74%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L GDR L +GLKGDPTY+VVE + + YGINA+CTHLGCVVPWN AENKF CPCH
Sbjct: 70 LENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+VVRGPAPLSLALAHAN + K++ PWTETDFRTG+APWWA
Sbjct: 130 GSQYDETGKVVRGPAPLSLALAHANTVDDKIILSPWTETDFRTGDAPWWA 179
>sp|P83794|UCRI_MASLA Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus
laminosus GN=petC PE=1 SV=2
Length = 179
Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 127/170 (74%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +
Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDR L +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+V+RGPAPLSLAL HA V++ +V PWTETDFRTGE PWW
Sbjct: 130 GSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWWV 179
>sp|B2J3K2|UCRI_NOSP7 Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1
Length = 179
Score = 223 bits (568), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 126/170 (74%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L GDR L +GLKGDPTY+VV+ + + YGINA+CTHLGCVVPWN AENKF CPCH
Sbjct: 70 LENRNAGDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
GSQY+ G+VVRGPAPLSLALAH NV + K+V PWTETDFRTG+APWW+
Sbjct: 130 GSQYDETGKVVRGPAPLSLALAHTNVSDDKIVLTPWTETDFRTGDAPWWS 179
>sp|Q46GW1|UCRI_PROMT Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL2A) GN=petC PE=3 SV=1
Length = 178
Score = 221 bits (562), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 130/176 (73%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN
Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 NVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
K++CPCHGSQY++ G+VVRGPAPLSLA+AH ++E+ +V+ WTETDFRTG PWW
Sbjct: 122 KYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177
>sp|A2C0R9|UCRI_PROM1 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL1A) GN=petC PE=3 SV=1
Length = 178
Score = 221 bits (562), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 130/176 (73%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN
Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 NVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
K++CPCHGSQY++ G+VVRGPAPLSLA+AH ++E+ +V+ WTETDFRTG PWW
Sbjct: 122 KYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177
>sp|Q7U566|UCRI_SYNPX Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH8102) GN=petC PE=3 SV=1
Length = 178
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 129/177 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I A WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 AITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KF+CPCHGSQY+ G+VVRGPAPLSLALA+ +VEN V WTETDFRTG+ PWWA
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178
>sp|A9BE84|UCRI_PROM4 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9211) GN=petC PE=3 SV=1
Length = 178
Score = 218 bits (554), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 127/173 (73%), Gaps = 1/173 (0%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPIT 64
Query: 116 AADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFI 175
A+ WL+ H GDR+L +GLKGDPTYL+VE + + ++GINA+CTHLGCVVPWNS NK+I
Sbjct: 65 ASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYI 124
Query: 176 CPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
CPCHGSQY+ G+VVRGPAPLSLALAH +VE+ KV W ETDFRTGE PWW
Sbjct: 125 CPCHGSQYDANGKVVRGPAPLSLALAHIDVEDDKVFVSQWAETDFRTGEKPWW 177
>sp|A2BPU5|UCRI_PROMS Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain AS9601) GN=petC PE=3 SV=1
Length = 178
Score = 213 bits (542), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 125/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
>sp|Q7VDC0|UCRI_PROMA Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=petC PE=3
SV=1
Length = 178
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A FF P G GGTTAKD +GN +
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVT 64
Query: 116 AADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFI 175
A WL+ H GDR+L +GLKGDPTYL+V+ D + ++GINA+CTHLGCVVPWNS NK+I
Sbjct: 65 ATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYI 124
Query: 176 CPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
CPCHGSQY+ G+VVRGPAPLSLAL H ++++ V+ WTETDFRTG+ PWWA
Sbjct: 125 CPCHGSQYDANGKVVRGPAPLSLALTHIDIDDDNVLVSQWTETDFRTGDKPWWA 178
>sp|A3PBI5|UCRI_PROM0 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9301) GN=petC PE=3 SV=1
Length = 178
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 125/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
>sp|Q31C72|UCRI_PROM9 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9312) GN=petC PE=3 SV=1
Length = 178
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 125/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
>sp|A8G3H7|UCRI_PROM2 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9215) GN=petC PE=3 SV=1
Length = 178
Score = 212 bits (539), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 124/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSKDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGGIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDIEDDAVLVKQWSETDFRTNENPWWA 178
>sp|Q7V2L4|UCRI_PROMP Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC
PE=3 SV=1
Length = 178
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 125/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL +H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH +V++ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178
>sp|A2BVC4|UCRI_PROM5 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9515) GN=petC PE=3 SV=1
Length = 178
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 124/177 (70%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLANHQAGDRSLVQGLKGDPTYLIVNSEGDIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
KFICPCHGSQY+ G+VVRGPAPLSLALAH +V++ V+ W+ETDFRT E PWWA
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPLSLALAHVDVDDDAVLVKQWSETDFRTNENPWWA 178
>sp|Q7XYM4|UCRIA_BIGNA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Bigelowiella natans GN=petC PE=2 SV=1
Length = 252
Score = 201 bits (510), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/217 (50%), Positives = 132/217 (60%), Gaps = 1/217 (0%)
Query: 14 QLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLL 73
QL + +G + P +F +R K QA D VPDMGKR+LMN L+
Sbjct: 36 QLSAVRGKIAAPRTSFQNAVSRVSRNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMNNLV 95
Query: 74 LGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEG 133
L AV+ Y +F PP G GG A DA+GN + A W +H R L +G
Sbjct: 96 LAAVAPVVASAGGCYLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDLVQG 155
Query: 134 LKGDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRG 192
+KGDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G VVRG
Sbjct: 156 IKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVRG 215
Query: 193 PAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWWA 229
PAP L LAH +NGK++ PWTETDFRTGE PWWA
Sbjct: 216 PAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWWA 252
>sp|Q2JUP1|UCRI_SYNJA Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain JA-3-3Ab) GN=petC PE=3 SV=1
Length = 172
Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R +N LL +V + L P +F PP G AG G A+DA+G I ++
Sbjct: 9 EAPPMSRRVFLNALLSSSVGVVVVGTLYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPC 178
L TH DR L +GLKGDPTY+V++ + +A+YG+NAVCTHLGCVVPWN+ EN F CPC
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVID-NGAVANYGLNAVCTHLGCVVPWNAGENLFKCPC 127
Query: 179 HGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFR 221
HGSQY G+V+RGPAP SL L A V+ V F PW DFR
Sbjct: 128 HGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
>sp|Q2JL39|UCRI_SYNJB Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=petC PE=3 SV=1
Length = 172
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R L+N LL G+V + L P +F PP G G G A+DA+G I ++
Sbjct: 9 EAPPMSRRVLLNALLSGSVGVVVVGALYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPC 178
L TH DR L +GLKGDPTY+V++ + +A+YG+NAVCTHLGCVVPWN EN F CPC
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVID-NGAVANYGLNAVCTHLGCVVPWNVGENLFKCPC 127
Query: 179 HGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFR 221
HGSQY G+V+RGPAP SL L A V+ V F PW DFR
Sbjct: 128 HGSQYAANGKVIRGPAPRSLELVSATVDGDNVRFSPWQGPDFR 170
>sp|Q7NCE1|UCRI_GLOVI Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter
violaceus (strain PCC 7421) GN=petC PE=3 SV=1
Length = 186
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A +P M +RQL++ + GA++ T L P +F PP G G AKD G DI
Sbjct: 6 AQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDISV 64
Query: 117 ADWLNTHGPGDRTLTEGLK---GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENK 173
+ L PG+ LT GL GD TY+V+ K +A++GINAVCTHLGCVVPW++ +
Sbjct: 65 SKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWDNGAKQ 124
Query: 174 FICPCHGSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFR-----TGEAPWW 228
F CPCHGS YN G + RGPAP LAL A V + KV+ PWTE DFR + P+W
Sbjct: 125 FKCPCHGSVYNADGGLERGPAPQPLALVKATVSDDKVLIAPWTEQDFRCTDLWCNKDPYW 184
>sp|Q93SW8|UCRIB_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=petC2 PE=3 SV=1
Length = 178
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P M +RQL+N V+ + P FF PP + A GG A+D IG+ I A+
Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCH
Sbjct: 70 L-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCH 128
Query: 180 GSQYNNQGRVVRGPAPLSLALAHANVENGKVVFVPWTETDFRTGEAPWW 228
GS+Y+ QG V RGPA L L V++ + PW ETD RTGE PWW
Sbjct: 129 GSRYDAQGSVERGPANRPLKLVQVQVKDDYIWISPWQETDPRTGEKPWW 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,102,160
Number of Sequences: 539616
Number of extensions: 3845313
Number of successful extensions: 8334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 8152
Number of HSP's gapped (non-prelim): 126
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)