Your job contains 1 sequence.
>027009
MSQWLHQRPLHNPLPNPYPLSPRNSMTFQFQRPMLLVLNRTTLLVLLSLLVVLGVILPWT
GTPGFMFPNATSSLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKH
QDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHIL
ELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVRTLYSMTLELV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027009
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2124968 - symbol:MGP4 "male gametophyte defect... 718 6.1e-71 1
TAIR|locus:2133392 - symbol:RGXT1 "rhamnogalacturonan xyl... 698 8.0e-69 1
TAIR|locus:2133457 - symbol:RGXT2 "rhamnogalacturonan xyl... 669 9.4e-66 1
TAIR|locus:2027605 - symbol:RGXT3 "RhamnoGalacturonan spe... 666 2.0e-65 1
TAIR|locus:2026831 - symbol:RAY1 "REDUCED ARABINOSE YARIV... 138 3.7e-08 1
TAIR|locus:2119827 - symbol:AT4G19970 "AT4G19970" species... 131 8.6e-07 2
DICTYBASE|DDB_G0283005 - symbol:agtA "UDP-Gal:fucoside al... 120 5.6e-05 1
TAIR|locus:2058769 - symbol:XEG113 "xyloglucanase 113" sp... 114 0.00031 1
TAIR|locus:2156304 - symbol:AT5G44820 "AT5G44820" species... 111 0.00032 1
TAIR|locus:2037248 - symbol:RRA2 "REDUCED RESIDUAL ARABIN... 111 0.00041 1
>TAIR|locus:2124968 [details] [associations]
symbol:MGP4 "male gametophyte defective 4" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0042285 "xylosyltransferase activity" evidence=IDA] [GO:0048868
"pollen tube development" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002687 CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 EMBL:AL161491 GO:GO:0048868
GO:GO:0042285 PANTHER:PTHR10994 GO:GO:0010306 HOGENOM:HOG000241399
KO:K11714 ProtClustDB:CLSN2682897 EMBL:BT033130 IPI:IPI00537987
PIR:A85016 RefSeq:NP_849279.1 UniGene:At.20197
ProteinModelPortal:Q9M146 PRIDE:Q9M146 EnsemblPlants:AT4G01220.1
GeneID:828028 KEGG:ath:AT4G01220 TAIR:At4g01220 InParanoid:Q9M146
OMA:KPLDHSH PhylomeDB:Q9M146 Genevestigator:Q9M146 Uniprot:Q9M146
Length = 360
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 131/165 (79%), Positives = 143/165 (86%)
Query: 58 PWTGTPGFMFPNATS-SLAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISIS 116
PW G+P F PN S S +KWRDY+L QA FVAKNGT+IVCAVS PYLPFLNNWLIS+S
Sbjct: 58 PWAGSPLFPSPNKLSPSQSKWRDYSLPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVS 117
Query: 117 RQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHL 176
RQKHQDQVLVIAEDYATLYKVN +WPGHAVL+PPA DSQTAHKFGSQGFFNFT+RRP HL
Sbjct: 118 RQKHQDQVLVIAEDYATLYKVNEKWPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHL 177
Query: 177 LHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVRTL 221
L ILELGYNVMYNDVDMVWL+DPF YL+G HD YF DDM A++ L
Sbjct: 178 LEILELGYNVMYNDVDMVWLQDPFQYLEGKHDAYFMDDMTAIKPL 222
>TAIR|locus:2133392 [details] [associations]
symbol:RGXT1 "rhamnogalacturonan xylosyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY924810
EMBL:BK005829 IPI:IPI00542928 PIR:T01998 RefSeq:NP_192086.1
UniGene:At.50860 ProteinModelPortal:Q9ZSJ2 STRING:Q9ZSJ2
EnsemblPlants:AT4G01770.1 GeneID:828129 KEGG:ath:AT4G01770
TAIR:At4g01770 InParanoid:Q9ZSJ2 OMA:HSHDLPH PhylomeDB:Q9ZSJ2
Genevestigator:Q9ZSJ2 Uniprot:Q9ZSJ2
Length = 361
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 129/170 (75%), Positives = 146/170 (85%)
Query: 58 PWTGTPGFMFPNA-TSSLA-----KWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFLNNW 111
PW G+P F+FPN +SSL+ KWRDYTL+QAA FVAKNGT+IVCAVS P+LPFLNNW
Sbjct: 52 PWPGSPLFLFPNRLSSSLSPSPQSKWRDYTLAQAARFVAKNGTVIVCAVSSPFLPFLNNW 111
Query: 112 LISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSR 171
LIS+SRQKHQD+VLVIAEDY TLYKVN +WPGHAVL+PPA DS+TA FGSQGFFNFT+R
Sbjct: 112 LISVSRQKHQDKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAFSFGSQGFFNFTAR 171
Query: 172 RPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVRTL 221
RP HLL ILELGYNVMYNDVDMVWL+DPF YL+G HD YFTDDM ++ L
Sbjct: 172 RPQHLLQILELGYNVMYNDVDMVWLQDPFLYLEGSHDAYFTDDMPQIKPL 221
>TAIR|locus:2133457 [details] [associations]
symbol:RGXT2 "rhamnogalacturonan xylosyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY065071
EMBL:BT002558 EMBL:BK005830 IPI:IPI00536959 PIR:T02000
RefSeq:NP_192084.1 UniGene:At.3842 ProteinModelPortal:Q9ZSJ0
IntAct:Q9ZSJ0 EnsemblPlants:AT4G01750.1 GeneID:827905
KEGG:ath:AT4G01750 TAIR:At4g01750 InParanoid:Q9ZSJ0 OMA:PDQNGET
PhylomeDB:Q9ZSJ0 Genevestigator:Q9ZSJ0 Uniprot:Q9ZSJ0
Length = 367
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 123/175 (70%), Positives = 143/175 (81%)
Query: 58 PWTGTPGFMFPNATSS-----------LAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLP 106
PW G+P +FPN SS ++WR+YTL+QAA FVA NGT+IVCAVS P+LP
Sbjct: 53 PWPGSPLLLFPNKVSSPSYASSLSPHAKSEWRNYTLAQAAKFVATNGTVIVCAVSSPFLP 112
Query: 107 FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFF 166
FLNNWLIS+SRQKHQ++VLVIAEDY TLYKVN +WPGHAVL+PPA DS+TA+ FGSQGFF
Sbjct: 113 FLNNWLISVSRQKHQEKVLVIAEDYITLYKVNEKWPGHAVLIPPALDSKTAYSFGSQGFF 172
Query: 167 NFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVRTL 221
NFT+RRP HLL ILELGYNVMYNDVDMVWL+DPF YL+G HD YFTDDM ++ L
Sbjct: 173 NFTARRPQHLLQILELGYNVMYNDVDMVWLQDPFQYLEGSHDAYFTDDMPQIKPL 227
>TAIR|locus:2027605 [details] [associations]
symbol:RGXT3 "RhamnoGalacturonan specific
Xylosyltransferase 3" species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0035252
"UDP-xylosyltransferase activity" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GenomeReviews:CT485782_GR CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 GO:GO:0035252 EMBL:AC009323
PANTHER:PTHR10994 EMBL:BT005111 EMBL:AK117396 IPI:IPI00528206
PIR:B96607 RefSeq:NP_176048.1 UniGene:At.42755
ProteinModelPortal:Q9FXA7 PRIDE:Q9FXA7 EnsemblPlants:AT1G56550.1
GeneID:842108 KEGG:ath:AT1G56550 TAIR:At1g56550
HOGENOM:HOG000241399 InParanoid:Q9FXA7 KO:K11714 OMA:NETWVNE
PhylomeDB:Q9FXA7 ProtClustDB:CLSN2682897 Genevestigator:Q9FXA7
Uniprot:Q9FXA7
Length = 383
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 126/173 (72%), Positives = 143/173 (82%)
Query: 58 PWTGTPGFMFPNATSS---------LAKWRDYTLSQAASFVAKNGTIIVCAVSQPYLPFL 108
P T + FMFPN TSS ++ WRDY+L+QA FVAKN T+IVCAVS P+LPFL
Sbjct: 39 PLTKSSLFMFPNTTSSSLSPSSSLSVSDWRDYSLAQAVKFVAKNETVIVCAVSYPFLPFL 98
Query: 109 NNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNF 168
NNWLISISRQKHQ++VLVIAEDYATLYKVN +WPGHAVL+PPA D Q+AHKFGSQGFFN
Sbjct: 99 NNWLISISRQKHQEKVLVIAEDYATLYKVNEKWPGHAVLIPPALDPQSAHKFGSQGFFNL 158
Query: 169 TSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQGDHDVYFTDDMAAVRTL 221
TSRRP HLL+ILELGYNVMYNDVDMVWL+DPF YLQG +D YF DDM A++ L
Sbjct: 159 TSRRPQHLLNILELGYNVMYNDVDMVWLQDPFDYLQGSYDAYFMDDMIAIKPL 211
>TAIR|locus:2026831 [details] [associations]
symbol:RAY1 "REDUCED ARABINOSE YARIV 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IDA]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 PANTHER:PTHR10994 IPI:IPI00540709 RefSeq:NP_177220.2
UniGene:At.50024 ProteinModelPortal:F4I6V0
EnsemblPlants:AT1G70630.1 GeneID:843400 KEGG:ath:AT1G70630
OMA:CHFGTKC Uniprot:F4I6V0
Length = 537
Score = 138 (53.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 80 YTLSQAASFVA-KNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVN 138
+ L VA KN T+++ Y L +W+ + R K + ++ +D + +
Sbjct: 259 FDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLVCALDDETYQFSIL 318
Query: 139 GRWPGHAVLVPPAPDSQTAHK--FGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWL 196
P P AP + + + FGS+ F T + +L IL+LGYNV+ +DVD+ W
Sbjct: 319 QGLP--VFFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWF 376
Query: 197 KDPFPYLQ 204
++P P LQ
Sbjct: 377 RNPLPLLQ 384
>TAIR|locus:2119827 [details] [associations]
symbol:AT4G19970 "AT4G19970" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021637
EMBL:AL161552 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
IPI:IPI00541656 PIR:T04881 RefSeq:NP_193730.1 UniGene:At.50356
PaxDb:O49424 EnsemblPlants:AT4G19970.1 GeneID:827741
KEGG:ath:AT4G19970 TAIR:At4g19970 eggNOG:NOG312116
HOGENOM:HOG000114721 OMA:DFQITCD PhylomeDB:O49424
ArrayExpress:O49424 Genevestigator:O49424 Uniprot:O49424
Length = 715
Score = 131 (51.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 37/131 (28%), Positives = 58/131 (44%)
Query: 91 KNGTIIVCAVSQPYL-P------FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPG 143
+N T+IV ++Q + P FL ++ I +K V+V+ D + + P
Sbjct: 452 ENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLLQHVVVVCLDSKAFARCSQLHPN 511
Query: 144 HAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYL 203
L D F + + RR L +LE+GYN ++ D D++WL+DPFP L
Sbjct: 512 CYYLKTTGTDFSGEKLFATPDYLKMMWRRIELLTQVLEMGYNFIFTDADIMWLRDPFPRL 571
Query: 204 QGDHDVYFTDD 214
D D D
Sbjct: 572 YPDGDFQMACD 582
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 91 KNGTIIVCAVSQPYL-P------FLNNWLISISRQKHQDQVLVIAED---YATLYKVNGR 140
++ T+I+ A++Q + P F ++ + I ++ V+ + D Y KV+
Sbjct: 112 EDNTVIITALNQAWAEPNSTFDVFRESFKVGIETERLLKHVIAVCLDIKAYDQCLKVH-- 169
Query: 141 WPGHAVLVPPAPDSQTA--HKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKD 198
P H L+ Q + ++F + G+ RR L ++ LGYN ++ D D++WL+D
Sbjct: 170 -P-HCYLINATDSDQLSGPNRFMTPGYLKLIWRRMDLLRQVIGLGYNFIFTDADILWLRD 227
Query: 199 PFPYLQGDHDVYFTDD 214
PFP D D T D
Sbjct: 228 PFPRFFPDADFQITCD 243
Score = 36 (17.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 64 GFMFPNATSSLAKWRDYTLSQAASFVAKN 92
GF + A + +K+ Y + + F K+
Sbjct: 259 GFTYVKANNKTSKFYKYWIRSSRKFPGKH 287
>DICTYBASE|DDB_G0283005 [details] [associations]
symbol:agtA "UDP-Gal:fucoside
alpha3-galactosyltransferase" species:44689 "Dictyostelium
discoideum" [GO:0035250 "UDP-galactosyltransferase activity"
evidence=IDA] [GO:0006486 "protein glycosylation" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;TAS] [GO:0004381
"fucosylgalactoside 3-alpha-galactosyltransferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00378 dictyBase:DDB_G0283005
GO:GO:0005737 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006486 EMBL:AAFI02000049
GO:GO:0035250 EMBL:DQ340632 RefSeq:XP_639311.1
ProteinModelPortal:Q54RP0 CAZy:GT77 EnsemblProtists:DDB0231341
GeneID:8623882 KEGG:ddi:DDB_G0283005 OMA:SSINCIH GO:GO:0004381
InterPro:IPR005069 Pfam:PF03407 Uniprot:Q54RP0
Length = 648
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 77 WRDYTLSQAASF----VAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYA 132
+RD TL+ F + K+ I+ C + Y F I R +D ++ +
Sbjct: 22 FRDMTLNLLKCFEKLSIDKSRYILYCMDDKAYQFFAEFKGIECQRFS-RDDIINSSTSST 80
Query: 133 TLYKVNGRWPGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVD 192
L+ N + S+ A +G GF + +P +L +L+ GYNV++ D D
Sbjct: 81 QLFHDNNTNDNKGIY------SENAESYGDIGFRAICNEKPLVVLDVLKKGYNVLWTDTD 134
Query: 193 MVWLKDPFPYLQGD--HDVYFTDD 214
+VW +DPF + D + FT+D
Sbjct: 135 IVWKRDPFIHFYQDINQENQFTND 158
>TAIR|locus:2058769 [details] [associations]
symbol:XEG113 "xyloglucanase 113" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=IMP] [GO:0052325 "cell wall pectin biosynthetic process"
evidence=IMP] [GO:0052636 "arabinosyltransferase activity"
evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002685 GO:GO:0005768
GO:GO:0006486 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 GO:GO:0052636 GO:GO:0052325
PANTHER:PTHR10994 EMBL:AY074327 IPI:IPI00544266 RefSeq:NP_850250.1
UniGene:At.75202 ProteinModelPortal:Q8VXZ5 SMR:Q8VXZ5 PRIDE:Q8VXZ5
EnsemblPlants:AT2G35610.1 GeneID:818128 KEGG:ath:AT2G35610
TAIR:At2g35610 InParanoid:Q8VXZ5 OMA:SIFCSGH PhylomeDB:Q8VXZ5
ProtClustDB:CLSN2680053 Genevestigator:Q8VXZ5 Uniprot:Q8VXZ5
Length = 644
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 39/140 (27%), Positives = 62/140 (44%)
Query: 91 KNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPGHAVLVPP 150
K+ IIV + ++ F+ W+ ++ +LV A D L + W G V
Sbjct: 130 KDNVIIVTFGNYAFMDFILTWVKHLT-DLDLSNILVGAMDTKLLEALY--WKGVPVFDMG 186
Query: 151 APDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYLQG--DHD 208
+ S +GS F + + +L GY ++ D DMVWLK+P PYL D D
Sbjct: 187 SHMSTVDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDAD 246
Query: 209 VYFTDDMAAVRTLYSMTLEL 228
V + D V T+ +L++
Sbjct: 247 VLTSSDQV-VPTVIDDSLDI 265
>TAIR|locus:2156304 [details] [associations]
symbol:AT5G44820 "AT5G44820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 HOGENOM:HOG000238616 EMBL:BT026026 IPI:IPI00527813
RefSeq:NP_199295.2 UniGene:At.30051 STRING:Q147R7 PRIDE:Q147R7
DNASU:834512 EnsemblPlants:AT5G44820.1 GeneID:834512
KEGG:ath:AT5G44820 TAIR:At5g44820 InParanoid:Q147R7 OMA:WYAARER
PhylomeDB:Q147R7 Genevestigator:Q147R7 Uniprot:Q147R7
Length = 367
Score = 111 (44.1 bits), Expect = 0.00032, P = 0.00032
Identities = 32/131 (24%), Positives = 56/131 (42%)
Query: 91 KNGTIIVCAVSQPYL-P------FLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRWPG 143
KN T+I+ ++Q + P FL ++ I Q+ V+V+ D + +
Sbjct: 102 KNNTVIITTLNQAWAEPNSLFDLFLESFRIGQGTQQLLKHVVVVCLDIKAFERCSQLHTN 161
Query: 144 HAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLHILELGYNVMYNDVDMVWLKDPFPYL 203
+ D + + + R L +LE+G+N ++ D D++WL+DPFP L
Sbjct: 162 CYHIETSETDFSGEKVYNTPDYLKMMWARIDLLTQVLEMGFNFIFTDADIMWLRDPFPRL 221
Query: 204 QGDHDVYFTDD 214
D D D
Sbjct: 222 YPDGDFQMACD 232
>TAIR|locus:2037248 [details] [associations]
symbol:RRA2 "REDUCED RESIDUAL ARABINOSE 2" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR003388 GO:GO:0005783 EMBL:CP002684
GO:GO:0016740 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AC013258 GO:GO:0080147 PANTHER:PTHR10994 EMBL:AY039531
EMBL:AY102148 IPI:IPI00527154 PIR:B96781 RefSeq:NP_565102.1
UniGene:At.17941 ProteinModelPortal:Q9C9Q5 IntAct:Q9C9Q5
PRIDE:Q9C9Q5 EnsemblPlants:AT1G75110.1 GeneID:843848
KEGG:ath:AT1G75110 TAIR:At1g75110 InParanoid:Q9C9Q5 OMA:SCESSER
PhylomeDB:Q9C9Q5 ProtClustDB:CLSN2682481 Genevestigator:Q9C9Q5
Uniprot:Q9C9Q5
Length = 428
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 40/142 (28%), Positives = 63/142 (44%)
Query: 82 LSQAASFVAKNGTIIVCAVSQPYLPFLNNWLISISRQKHQDQVLVIAEDYATLYKVNGRW 141
L++ VA N IIV + P L + S+ R Q+ ++V +D + +
Sbjct: 146 LAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVKRVGIQNYLIVALDDSMESFCESKE- 204
Query: 142 PGHAVLVPPAPDSQTAHKFGSQGFFNFTSRRPCHLLH-ILELGYNVMYNDVDMVWLKDPF 200
V PD + G G + S +L L+LGY+V+ +DVD+V+L++PF
Sbjct: 205 ---VVFYKRDPD-KAVDMVGKSGGNHAVSGLKFRVLREFLQLGYSVLLSDVDIVFLQNPF 260
Query: 201 PYLQGDHDVYFTDDMAAVRTLY 222
+L D DV D T Y
Sbjct: 261 SHLHRDSDVESMSDGHDNNTAY 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.136 0.446 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 190 0.00091 110 3 11 22 0.39 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 612 (65 KB)
Total size of DFA: 191 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.41u 0.15s 16.56t Elapsed: 00:00:00
Total cpu time: 16.41u 0.15s 16.56t Elapsed: 00:00:00
Start: Mon May 20 19:41:30 2013 End: Mon May 20 19:41:30 2013