Query 027012
Match_columns 229
No_of_seqs 137 out of 423
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 05:26:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w1g_A HPDK1, 3-phosphoinositi 97.4 0.0025 8.5E-08 51.7 11.5 88 91-182 48-138 (151)
2 2cod_A Centaurin-delta 1; ARF 95.6 0.18 6.3E-06 36.9 11.0 89 91-182 4-98 (115)
3 2dn6_A KIAA0640 protein; PH do 95.2 0.56 1.9E-05 33.9 12.6 92 91-183 4-103 (115)
4 3a58_A Exocyst complex compone 94.2 0.84 2.9E-05 40.7 12.9 107 83-191 90-227 (320)
5 2i5f_A Pleckstrin; PH domain, 93.8 1.2 4.2E-05 31.7 12.8 89 92-180 4-103 (109)
6 1eaz_A Tandem PH domain contai 93.8 1.1 3.6E-05 32.8 11.2 91 92-183 11-111 (125)
7 2d9x_A Oxysterol binding prote 93.7 0.52 1.8E-05 34.8 9.3 87 91-178 4-96 (120)
8 1u5d_A SKAP55, SRC kinase-asso 93.7 1.1 3.6E-05 31.7 10.6 87 93-179 1-98 (108)
9 1pls_A Pleckstrin homology dom 93.4 0.98 3.3E-05 32.6 10.2 87 92-178 2-93 (113)
10 1x05_A Pleckstrin; PH domain, 93.1 1.9 6.6E-05 31.8 12.0 90 92-181 15-115 (129)
11 2dhk_A TBC1 domain family memb 93.0 1.2 4.2E-05 32.8 10.4 87 92-179 5-97 (119)
12 1u5f_A SRC-associated adaptor 92.6 2.3 7.8E-05 32.4 11.8 89 93-181 15-114 (148)
13 1wgq_A FYVE, rhogef and PH dom 92.3 1.9 6.4E-05 30.9 10.4 90 92-181 5-98 (109)
14 1x1g_A Pleckstrin 2; PH domain 92.2 2.2 7.5E-05 31.4 10.9 90 92-181 15-119 (129)
15 2d9y_A Pleckstrin homology dom 92.1 2.4 8.3E-05 30.4 11.8 92 92-183 8-106 (117)
16 1upq_A PEPP1; PH domain, phosp 91.9 2.7 9.3E-05 30.5 12.3 91 91-182 7-105 (123)
17 1v89_A Hypothetical protein KI 91.9 2.6 8.8E-05 30.2 13.1 89 92-180 5-106 (118)
18 2dkp_A Pleckstrin homology dom 91.7 2.9 9.9E-05 30.6 12.7 89 92-181 18-114 (128)
19 3hie_A Protein PSL1, exocyst c 91.6 1.2 4.2E-05 36.5 9.4 84 108-193 62-161 (171)
20 3aj4_A Pleckstrin homology dom 90.2 3.4 0.00011 29.6 9.9 90 92-181 2-106 (112)
21 1v61_A RAC/CDC42 guanine nucle 89.2 2.5 8.6E-05 33.0 9.0 86 93-181 26-121 (132)
22 1fao_A Dual adaptor of phospho 89.2 5.1 0.00017 29.3 11.5 91 92-183 15-112 (126)
23 2yry_A Pleckstrin homology dom 88.6 5.4 0.00018 28.8 12.5 90 92-181 19-115 (122)
24 3rcp_A Pleckstrin homology dom 88.5 4.9 0.00017 28.2 10.9 83 99-182 3-89 (103)
25 1v5u_A SBF1, SET binding facto 88.2 5.5 0.00019 28.5 10.4 91 92-183 5-108 (117)
26 1u5e_A SRC-associated adaptor 87.5 3.2 0.00011 34.3 9.1 88 93-180 104-202 (211)
27 2cof_A Protein KIAA1914; PH do 87.2 5.5 0.00019 28.4 9.3 89 92-181 5-96 (107)
28 2y7b_A Actin-binding protein a 86.8 7 0.00024 28.7 10.0 89 92-180 2-122 (134)
29 1wg7_A Dedicator of cytokinesi 86.5 5.8 0.0002 30.0 9.6 87 92-178 15-116 (150)
30 3tfm_A Myosin X; split PH doma 84.7 11 0.00039 31.1 11.2 91 92-183 55-155 (228)
31 1v5m_A SH2 and PH domain-conta 81.7 1.2 4E-05 35.2 3.6 56 126-181 65-125 (136)
32 1qqg_A IRS-1, insulin receptor 80.7 13 0.00044 31.8 10.2 86 92-181 7-107 (264)
33 1btk_A Bruton'S tyrosine kinas 80.7 19 0.00065 28.4 12.0 86 95-181 3-127 (169)
34 3peg_A Neurofibromin; SEC14 do 80.0 9.6 0.00033 33.3 9.3 82 96-183 192-282 (290)
35 1dbh_A Protein (human SOS 1); 78.4 28 0.00095 30.2 11.9 85 93-181 245-344 (354)
36 1v88_A Oxysterol binding prote 78.3 20 0.00067 27.1 10.6 70 91-160 4-75 (130)
37 3cxb_B Pleckstrin homology dom 77.6 18 0.00061 26.2 9.4 73 111-183 21-98 (112)
38 1v5p_A Pleckstrin homology dom 77.4 20 0.0007 26.8 10.7 89 93-182 13-116 (126)
39 1ntv_A Disabled homolog 1; bet 77.0 17 0.00058 28.4 9.1 75 109-183 59-137 (152)
40 2p0d_A RHO GTPase-activating p 76.4 21 0.0007 26.6 9.2 89 92-180 9-118 (129)
41 4a6h_A Phosphatidylinositol 4, 75.6 23 0.00078 26.5 11.1 87 95-181 6-113 (120)
42 1mix_A Talin; focal adhesion, 75.6 20 0.00068 28.6 9.5 86 93-183 115-202 (206)
43 3pg7_A Neurofibromin; SEC lipi 75.4 23 0.00079 30.1 10.3 86 92-183 156-248 (256)
44 3so6_A LDL receptor adaptor pr 74.8 24 0.00083 26.4 9.4 75 109-183 42-124 (137)
45 1p3r_A Disabled homolog 2; PTB 73.7 31 0.0011 27.1 10.4 75 109-183 58-136 (160)
46 2dtc_A RAL guanine nucleotide 73.4 28 0.00095 26.6 9.3 70 111-181 25-107 (126)
47 2dfk_A Collybistin II; DH doma 72.6 51 0.0017 29.3 12.3 91 93-183 255-363 (402)
48 2d9v_A Pleckstrin homology dom 72.6 26 0.0009 25.8 13.6 91 91-181 4-109 (130)
49 2ej8_A DCC-interacting protein 72.5 19 0.00065 28.3 8.4 76 109-184 55-141 (160)
50 1x1f_A Signal-transducing adap 72.4 32 0.0011 26.7 12.6 86 92-178 15-105 (149)
51 1unq_A RAC-alpha serine/threon 72.0 15 0.00053 26.5 7.4 88 92-179 5-103 (125)
52 2lul_A Tyrosine-protein kinase 71.5 34 0.0012 26.6 12.7 94 91-185 11-123 (164)
53 2ela_A Adapter protein contain 71.5 20 0.00069 28.8 8.5 76 109-184 68-154 (175)
54 2pz1_A RHO guanine nucleotide 71.4 59 0.002 29.4 12.9 92 93-184 332-441 (466)
55 1fgy_A GRP1; PH domain, signal 71.2 25 0.00087 25.1 11.7 86 94-179 4-113 (127)
56 4anj_A Unconventional myosin-V 71.2 0.046 1.6E-06 56.2 -9.2 106 50-176 909-1019(1052)
57 3f0w_A NUMB-R, NUMB-like prote 70.0 38 0.0013 26.7 9.7 75 109-183 76-157 (168)
58 3pvl_A Myosin VIIA isoform 1; 69.9 47 0.0016 32.1 12.1 72 111-183 493-567 (655)
59 1mai_A Phospholipase C delta-1 68.5 27 0.00093 26.3 8.2 81 99-179 17-114 (131)
60 2j59_M RHO-GTPase activating p 67.7 36 0.0012 26.1 9.0 72 110-182 29-107 (168)
61 3t06_A PDZ-rhogef, RHO guanine 67.4 46 0.0016 29.5 10.8 89 93-181 293-403 (418)
62 3au4_A Myosin-X; protein-prote 66.7 24 0.00083 33.0 9.1 82 93-180 451-532 (555)
63 4f7g_A Talin-1; alpha-helix bu 66.2 52 0.0018 26.7 12.4 85 93-181 126-212 (222)
64 1zc3_B Exocyst complex protein 65.8 38 0.0013 25.0 11.9 91 92-183 5-107 (113)
65 1xcg_A PDZ-rhogef, RHO guanine 64.9 57 0.0019 28.3 10.7 89 93-182 251-365 (368)
66 2w2x_D 1-phosphatidylinositol- 62.4 43 0.0015 24.5 8.5 87 93-180 10-113 (124)
67 4dxa_B KREV interaction trappe 61.2 64 0.0022 27.8 10.2 73 109-183 240-313 (322)
68 1btn_A Beta-spectrin; signal t 60.6 38 0.0013 23.3 7.3 71 110-181 23-103 (106)
69 3hsa_A Pleckstrin homology dom 57.6 63 0.0022 24.9 8.9 82 91-181 30-123 (126)
70 4dx8_A Integrin beta-1-binding 57.5 49 0.0017 26.5 7.9 69 112-183 63-146 (154)
71 3ivf_A Talin-1; FERM domain, c 54.8 1.1E+02 0.0037 26.8 14.1 83 94-180 281-365 (371)
72 2i1j_A Moesin; FERM, coiled-co 53.7 1.1E+02 0.0037 29.1 11.2 82 93-183 202-288 (575)
73 2rsg_A Collagen type IV alpha- 52.6 51 0.0018 22.3 9.5 78 98-177 4-85 (94)
74 2da0_A 130-kDa phosphatidylino 52.6 59 0.002 23.0 10.8 84 93-178 8-93 (114)
75 1wjm_A Beta-spectrin III; PH d 51.8 54 0.0019 23.5 7.1 70 111-181 33-112 (123)
76 2r09_A Cytohesin-3; autoinhibi 50.3 1.3E+02 0.0044 26.3 12.2 87 95-181 213-323 (347)
77 3a8p_A T-lymphoma invasion and 48.2 99 0.0034 26.1 9.1 70 111-180 40-118 (263)
78 3tca_A Amyloid beta A4 precurs 47.3 1.1E+02 0.0037 25.2 9.1 85 96-180 169-270 (291)
79 1fho_A UNC-89; pleckstrin homo 44.9 80 0.0027 23.7 7.1 71 94-165 9-87 (119)
80 2vrw_B P95VAV, VAV1, proto-onc 44.6 1.6E+02 0.0056 25.8 10.9 90 93-183 232-335 (406)
81 3ky9_A Proto-oncogene VAV; cal 44.2 2E+02 0.0069 26.8 11.7 90 93-183 404-507 (587)
82 3p6a_A RHO guanine nucleotide 43.4 1.6E+02 0.0055 25.4 10.9 89 93-181 257-366 (377)
83 1txd_A RHO guanine nucleotide 41.5 1.6E+02 0.0056 25.5 9.8 90 93-183 255-369 (385)
84 1dro_A Beta-spectrin; cytoskel 40.3 60 0.0021 23.4 5.7 71 111-181 33-114 (122)
85 1wi1_A Calcium-dependent activ 39.6 1.2E+02 0.0043 23.0 10.1 88 93-182 6-106 (126)
86 3odw_A RHO guanine nucleotide 39.3 2.1E+02 0.0071 26.6 10.5 91 93-183 410-524 (536)
87 3pp2_A RHO GTPase-activating p 36.5 1.2E+02 0.0042 22.0 10.2 71 111-182 32-119 (124)
88 1aqc_A X11; PTB domain; 2.30A 36.5 1.6E+02 0.0053 23.3 9.7 73 109-184 62-159 (172)
89 3lju_X ARF-GAP with dual PH do 34.3 2.5E+02 0.0085 24.9 9.9 90 93-183 267-372 (386)
90 3b77_A Uncharacterized protein 33.9 63 0.0022 26.8 5.2 60 92-160 27-96 (193)
91 3mpx_A FYVE, rhogef and PH dom 33.9 2.4E+02 0.0082 24.8 9.7 88 93-183 242-337 (434)
92 3qqz_A Putative uncharacterize 33.8 1.2E+02 0.0042 25.4 7.3 43 112-157 39-86 (255)
93 3mbr_X Glutamine cyclotransfer 33.5 74 0.0025 26.8 5.8 41 112-153 75-117 (243)
94 2gj2_A WSV230, VP9; ferredoxin 33.3 53 0.0018 23.6 4.1 31 136-166 28-58 (85)
95 1kz7_A Guanine nucleotide exch 33.0 2.4E+02 0.0081 24.3 11.5 80 93-173 208-312 (353)
96 2yt0_A Amyloid beta A4 protein 32.3 1.4E+02 0.0049 24.0 7.2 70 109-179 98-173 (176)
97 4dbb_A Amyloid beta A4 precurs 32.1 1.8E+02 0.0061 22.6 9.9 74 108-184 50-131 (162)
98 1ef1_A Moesin; membrane, FERM 29.9 2.4E+02 0.0082 23.4 11.2 80 94-182 200-284 (294)
99 3nol_A Glutamine cyclotransfer 29.1 73 0.0025 27.3 5.1 40 112-152 97-138 (262)
100 1h4r_A Merlin; FERM, neurofibr 26.9 2.8E+02 0.0097 23.3 11.1 82 93-183 219-305 (314)
101 3dsm_A Uncharacterized protein 24.7 1.6E+02 0.0056 24.4 6.6 36 120-155 203-241 (328)
102 2rov_A RHO-associated protein 23.4 2.2E+02 0.0075 20.8 7.7 37 110-146 20-60 (117)
103 1dyn_A Dynamin; signal transdu 23.0 2.5E+02 0.0087 21.4 13.0 86 95-183 12-114 (125)
104 3sjl_D Methylamine dehydrogena 22.9 1.8E+02 0.0061 26.0 6.7 47 120-166 311-358 (386)
105 2ysz_A Amyloid beta A4 precurs 21.4 3.3E+02 0.011 22.0 9.0 75 109-184 52-132 (185)
106 1wgu_A APBB2, amyloid beta (A4 21.4 2.8E+02 0.0094 21.2 9.5 74 109-183 52-131 (136)
107 1nty_A Triple functional domai 21.2 3.6E+02 0.012 22.5 12.0 85 93-178 201-300 (311)
108 1foe_A T-lymphoma invasion and 21.1 4E+02 0.014 22.9 11.3 90 93-183 236-366 (377)
109 3nol_A Glutamine cyclotransfer 20.3 1.5E+02 0.0053 25.2 5.5 23 119-141 191-213 (262)
No 1
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=97.35 E-value=0.0025 Score=51.67 Aligned_cols=88 Identities=20% Similarity=0.249 Sum_probs=67.9
Q ss_pred CCccEEEeeeEEEeCCCCceeeeEEEEecC-eEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecC
Q 027012 91 GDKQVLFADKILKFTGSGKMKRRILLITDF-AIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST 169 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~-aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~ 169 (229)
.+|.|+....|.|-... ..+.|.||||+. .+|-+|+....+|..||++. .+++-..+|..|+||+|. -.|.|...
T Consensus 48 ~ge~Ilk~G~v~KrkGl-~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~--~l~ve~k~~~~F~I~Tp~-RtY~~~d~ 123 (151)
T 1w1g_A 48 ENNLILKMGPVDKRKGL-FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQ--ELRPEAKNFKTFFVHTPN-RTYYLMDP 123 (151)
T ss_dssp TTCCEEEEEEEEEEETT-EEEEEEEEEETTTEEEEEETTTTEEEEEECCCT--TCEEEESSSSEEEEEETT-EEEEEECT
T ss_pred CCCcEEEEEEEEecccC-cceeEEEEEcCCceEEEEcCccccccceEecCC--CeeEEEcCCCEEEEECCC-ceEEEEcC
Confidence 36899999999996443 357999999977 88899999999999999995 666777889899999997 56666543
Q ss_pred --cHHHHHHHHHHHH
Q 027012 170 --RKTEIVTVLVEAT 182 (229)
Q Consensus 170 --~ktElvt~L~~~~ 182 (229)
...|=+..|..+.
T Consensus 124 ~~~AqeWv~aI~~~~ 138 (151)
T 1w1g_A 124 SGNAHKWCRKIQEVW 138 (151)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 4455555554443
No 2
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=95.63 E-value=0.18 Score=36.88 Aligned_cols=89 Identities=17% Similarity=0.248 Sum_probs=65.3
Q ss_pred CCccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeee
Q 027012 91 GDKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA 167 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~ 167 (229)
++..++.+..+.|-.. ...-++|.++|++..|+-..... .+.+..|+|..+..|.... ++.|.|+.+ +..+.|.
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~--~~~F~i~~~-~r~~~l~ 80 (115)
T 2cod_A 4 GSSGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG--DNKFEVVTT-QRTFVFR 80 (115)
T ss_dssp CCSCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET--TTEEEEEES-SCCEEEE
T ss_pred CCCCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC--CCEEEEEeC-CcEEEEE
Confidence 4567889999999765 23558999999999998876543 4678889999988776554 677778754 4688898
Q ss_pred cCcHHHHH---HHHHHHH
Q 027012 168 STRKTEIV---TVLVEAT 182 (229)
Q Consensus 168 s~~ktElv---t~L~~~~ 182 (229)
++...|+- ..|..+.
T Consensus 81 a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 81 VEKEEERNDWISILLNAL 98 (115)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 88766654 4444444
No 3
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.24 E-value=0.56 Score=33.88 Aligned_cols=92 Identities=14% Similarity=0.072 Sum_probs=66.1
Q ss_pred CCccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEeccCC---cEEEEEeCCCCCee
Q 027012 91 GDKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSELSD---NFFAIIIPSEYDLL 165 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~~D---~~~VIhv~~e~D~l 165 (229)
+.+.++.+..+.|-... ..-++|.++|++..|+..... ..+.+..|+|..+..|...+..+ +.|.|+.+ +.-+.
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~-~r~~~ 82 (115)
T 2dn6_A 4 GSSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCF-DKTFE 82 (115)
T ss_dssp CCCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECS-SCEEE
T ss_pred CCCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeC-CCEEE
Confidence 45778889999997753 345899999999999888753 35678889999988887764433 46777765 46788
Q ss_pred eecCcHHHHH---HHHHHHHh
Q 027012 166 MASTRKTEIV---TVLVEATK 183 (229)
Q Consensus 166 l~s~~ktElv---t~L~~~~~ 183 (229)
|.++...|.- ..|..+..
T Consensus 83 l~a~s~~e~~~Wi~ai~~~~~ 103 (115)
T 2dn6_A 83 ISASDKKKKQEWIQAIHSTIH 103 (115)
T ss_dssp EECSSHHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHHHHH
Confidence 8887766654 44444443
No 4
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=94.24 E-value=0.84 Score=40.70 Aligned_cols=107 Identities=10% Similarity=0.119 Sum_probs=76.7
Q ss_pred HHHHHhhcC------CccEEEeeeEEEeCCC-----------CceeeeEEEEecCe-----EEEecC-----CcceeEEE
Q 027012 83 LMKILQKQG------DKQVLFADKILKFTGS-----------GKMKRRILLITDFA-----IYLVDP-----ETDALKRR 135 (229)
Q Consensus 83 ~~~l~~k~~------~e~VlFS~~V~Kinr~-----------gK~~~R~LiITd~a-----iY~ld~-----~~~klKrr 135 (229)
+..++++.. .|..+=-+.|.+.-.. ++..+|+|+|+-.. +++-.. ..|++.+.
T Consensus 90 i~scFsk~D~~~G~~~ErYITHVrV~Eds~~ps~pPp~~s~~kkKK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKT 169 (320)
T 3a58_A 90 INCCFSRPDHKTGEPPNNYITHVRIIEDSKFPSSRPPPDSKLENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRT 169 (320)
T ss_dssp HHHHSSSCCSSSSCCCCEEEEEEEEEEESSSTTSCCCTTCCGGGEEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEE
T ss_pred HHHHcCccccccCcccceEEEEEEEEecccCCCCCCCcccCccccCceEEEEEEecCCCceEEEEEEEecCCCceEecce
Confidence 345665532 2777778889997665 58889999986665 444422 35999999
Q ss_pred eeccccceEEEeccCCcEEEEEeCCCCCeeeecCc---HHHHHHHHHHHHhccCC-CeeE
Q 027012 136 IALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTR---KTEIVTVLVEATKGASE-ELEV 191 (229)
Q Consensus 136 IpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~---ktElvt~L~~~~~~~~~-~L~V 191 (229)
-+|.+|..|.--...+.-|+|++ +-+|.-++.. +.-|+..|.+.|.+-++ .+|.
T Consensus 170 W~L~ELk~Id~~~~~~~gF~LTl--~K~YyW~A~s~kER~~FI~sLvKiy~KYtgGk~P~ 227 (320)
T 3a58_A 170 WQLTELVRVEKDLEISEGFILTM--SKKYYWETNSAKERTVFIKSLITLYIQTFEGHVPE 227 (320)
T ss_dssp EEGGGCCEEEECSSCTTEEEEES--SSEEEEEESSHHHHHHHHHHHHHHHHHHTTTCBCE
T ss_pred echhhhhhhhcccCCCCceEEEe--CCceEEecCCHHHHHHHHHHHHHHHHHHcCCCCCe
Confidence 99999999994345556678998 4577777644 34499999999998775 5553
No 5
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=93.83 E-value=1.2 Score=31.66 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=63.0
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecC--eEEEecCC-cceeEEEeeccccceEEEecc-------CCcEEEEEeCC
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDF--AIYLVDPE-TDALKRRIALAAVEKMCLSEL-------SDNFFAIIIPS 160 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~--aiY~ld~~-~~klKrrIpL~~I~gVSvS~~-------~D~~~VIhv~~ 160 (229)
.+.++.+..+.|-... ..-++|.++|++. .|+-.+.. ....+..|+|....-+.+... ..+.|.|..++
T Consensus 4 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~ 83 (109)
T 2i5f_A 4 TGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD 83 (109)
T ss_dssp CCCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTT
T ss_pred cCceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCC
Confidence 3678899999997653 3458999999986 78777543 356788899998644444332 45677788776
Q ss_pred CCCeeeecCcHHHHHHHHHH
Q 027012 161 EYDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 161 e~D~ll~s~~ktElvt~L~~ 180 (229)
...+.|.++...|+-..+..
T Consensus 84 ~~~~~l~a~s~~e~~~Wi~a 103 (109)
T 2i5f_A 84 EVHYFLQAATPKERTEWIKA 103 (109)
T ss_dssp CCEEEEECSSHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHH
Confidence 55689988888877666544
No 6
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=93.82 E-value=1.1 Score=32.84 Aligned_cols=91 Identities=22% Similarity=0.261 Sum_probs=65.2
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-----cCCcEEEEEeCCCCCe
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSEYDL 164 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e~D~ 164 (229)
+..++.+..+.|-... ..-++|.++|++..||...... .+.+..|+|..+..|.... .....|.|..+ +..+
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~-~r~~ 89 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT-SRTF 89 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECS-SCEE
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeC-CcEE
Confidence 4678889999998653 3458999999999998886543 5678889999998887632 34566777755 4678
Q ss_pred eeecCcHHHHHH---HHHHHHh
Q 027012 165 LMASTRKTEIVT---VLVEATK 183 (229)
Q Consensus 165 ll~s~~ktElvt---~L~~~~~ 183 (229)
.|.++...|+-. .|..+..
T Consensus 90 ~l~a~s~~e~~~W~~al~~~i~ 111 (125)
T 1eaz_A 90 YVQADSPEEMHSWIKAVSGAIV 111 (125)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHH
Confidence 888877666554 4444443
No 7
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.72 E-value=0.52 Score=34.85 Aligned_cols=87 Identities=14% Similarity=0.129 Sum_probs=60.4
Q ss_pred CCccEEEeeeEEEeCCC-CceeeeEEEEe--cCeEEEecCCc---ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe
Q 027012 91 GDKQVLFADKILKFTGS-GKMKRRILLIT--DFAIYLVDPET---DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL 164 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~-gK~~~R~LiIT--d~aiY~ld~~~---~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ 164 (229)
+.+.+.++....|-... ..-++|.++|+ +..|+-..... .+.+-.|+|..+. |.........|.|..++..-+
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~-v~~~~~~~~~F~i~~~~~r~~ 82 (120)
T 2d9x_A 4 GSSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-ISPSDEDSHTFTVNAASGEQY 82 (120)
T ss_dssp CCSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCC-EECCSSSSSCEEECCSSSCCE
T ss_pred CCCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEE-EEecCCCCCEEEEEcCCCCEE
Confidence 45678888888887653 35589999998 46776665433 3667889999975 665554556677777765678
Q ss_pred eeecCcHHHHHHHH
Q 027012 165 LMASTRKTEIVTVL 178 (229)
Q Consensus 165 ll~s~~ktElvt~L 178 (229)
.|.++...|.-.++
T Consensus 83 ~l~a~s~~e~~~Wi 96 (120)
T 2d9x_A 83 KLRATDAKERQHWV 96 (120)
T ss_dssp EECCSSHHHHHHHH
T ss_pred EEECCCHHHHHHHH
Confidence 88887766654443
No 8
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=93.65 E-value=1.1 Score=31.70 Aligned_cols=87 Identities=10% Similarity=0.081 Sum_probs=60.5
Q ss_pred ccEEEeeeEEEeCCC-----CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEe-----ccCCcEEEEEeCCC
Q 027012 93 KQVLFADKILKFTGS-----GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLS-----ELSDNFFAIIIPSE 161 (229)
Q Consensus 93 e~VlFS~~V~Kinr~-----gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS-----~~~D~~~VIhv~~e 161 (229)
+.|+.+..+.|-... ..-++|.++|++..||...... .+.+..|+|..+.-+.+. ......|.|..++.
T Consensus 1 g~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~ 80 (108)
T 1u5d_A 1 GSVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDR 80 (108)
T ss_dssp CCEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSS
T ss_pred CCccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCC
Confidence 357788888887653 3448999999999998887543 456788999998743331 12235677777765
Q ss_pred CCeeeecCcHHHHHHHHH
Q 027012 162 YDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 162 ~D~ll~s~~ktElvt~L~ 179 (229)
.-+.|.++...|.-..+.
T Consensus 81 r~~~l~a~s~~e~~~Wi~ 98 (108)
T 1u5d_A 81 RTYEFTATSPAEARDWVD 98 (108)
T ss_dssp CCEEEECSSHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHH
Confidence 778898887766655443
No 9
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=93.36 E-value=0.98 Score=32.65 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=61.5
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEE-e--ccCCcEEEEEeCCCCCeee
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCL-S--ELSDNFFAIIIPSEYDLLM 166 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSv-S--~~~D~~~VIhv~~e~D~ll 166 (229)
+..++++..+.|-... ..-++|.++|++..||-..... .+.+..|+|..+..+.. . ....+.|.|..++..-+.|
T Consensus 2 e~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l 81 (113)
T 1pls_A 2 EPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFF 81 (113)
T ss_dssp CCCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEE
T ss_pred CCCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEE
Confidence 3567888899888653 3458999999999998887543 56788899999876542 1 2233467777776567888
Q ss_pred ecCcHHHHHHHH
Q 027012 167 ASTRKTEIVTVL 178 (229)
Q Consensus 167 ~s~~ktElvt~L 178 (229)
.++...|+-.++
T Consensus 82 ~a~s~~e~~~Wi 93 (113)
T 1pls_A 82 QAAFLEERDAWV 93 (113)
T ss_dssp ECSSHHHHHHHH
T ss_pred ECCCHHHHHHHH
Confidence 887766654443
No 10
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=93.13 E-value=1.9 Score=31.79 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=62.5
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecC--eEEEecCC-cceeEEEeeccccceEEEecc-------CCcEEEEEeCC
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDF--AIYLVDPE-TDALKRRIALAAVEKMCLSEL-------SDNFFAIIIPS 160 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~--aiY~ld~~-~~klKrrIpL~~I~gVSvS~~-------~D~~~VIhv~~ 160 (229)
.+.++.+..+.|-... ..-++|.++|++. .||-.+.. ..+.+..|+|....-+.+... ....|.|..+.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~ 94 (129)
T 1x05_A 15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD 94 (129)
T ss_dssp CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTT
T ss_pred cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCC
Confidence 4678999999996653 2347999999986 67777543 456788899998654444333 34677888776
Q ss_pred CCCeeeecCcHHHHHHHHHHH
Q 027012 161 EYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 161 e~D~ll~s~~ktElvt~L~~~ 181 (229)
..-+.|.++...|+-.++...
T Consensus 95 ~~~~~l~a~s~~e~~~Wi~al 115 (129)
T 1x05_A 95 EVHYFLQAATPKERTEWIKAI 115 (129)
T ss_dssp CCCCEEECSSHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH
Confidence 566888888777765554433
No 11
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.01 E-value=1.2 Score=32.82 Aligned_cols=87 Identities=17% Similarity=0.270 Sum_probs=62.2
Q ss_pred CccEEEeeeEEEeCCCC---ceeeeEEEEecC--eEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCee
Q 027012 92 DKQVLFADKILKFTGSG---KMKRRILLITDF--AIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLL 165 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~g---K~~~R~LiITd~--aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~l 165 (229)
.+.+.++....|-...+ .-+.|.++|++. .||-..... .+.+-.|+|..+..+.......+.|.|+.+ +..+.
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~-~r~~~ 83 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKTP-SRVIT 83 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECTTGGGCEEEEECS-SCCEE
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecCCCCCCEEEEEeC-CcEEE
Confidence 35677888888877522 337899999998 787775433 467888999998766544445567788876 57888
Q ss_pred eecCcHHHHHHHHH
Q 027012 166 MASTRKTEIVTVLV 179 (229)
Q Consensus 166 l~s~~ktElvt~L~ 179 (229)
|.++...|+-.++.
T Consensus 84 l~a~s~~e~~~Wi~ 97 (119)
T 2dhk_A 84 LKAATKQAMLYWLQ 97 (119)
T ss_dssp EECSSHHHHHHHHH
T ss_pred EECCCHHHHHHHHH
Confidence 98887777654443
No 12
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=92.64 E-value=2.3 Score=32.43 Aligned_cols=89 Identities=12% Similarity=0.118 Sum_probs=63.1
Q ss_pred ccEEEeeeEEEeCCCC-----ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEe-----ccCCcEEEEEeCCC
Q 027012 93 KQVLFADKILKFTGSG-----KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLS-----ELSDNFFAIIIPSE 161 (229)
Q Consensus 93 e~VlFS~~V~Kinr~g-----K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS-----~~~D~~~VIhv~~e 161 (229)
..++.+..+.|-.... .-++|.++|++..||-..... .+.+..|+|..++-+.+. ......|.|..++.
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~ 94 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK 94 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC
Confidence 6788999999987642 458999999999998886543 466888999988533321 11235677777665
Q ss_pred CCeeeecCcHHHHHHHHHHH
Q 027012 162 YDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 162 ~D~ll~s~~ktElvt~L~~~ 181 (229)
.-+.|.++...|+-.++...
T Consensus 95 r~~~l~a~s~~e~~~Wi~al 114 (148)
T 1u5f_A 95 RIYQFTAASPKDAEEWVQQL 114 (148)
T ss_dssp CEEEEECSSHHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHH
Confidence 67889888777766555443
No 13
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=92.33 E-value=1.9 Score=30.94 Aligned_cols=90 Identities=9% Similarity=0.072 Sum_probs=63.7
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccC--CcEEEEEeCCCCCeeee
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELS--DNFFAIIIPSEYDLLMA 167 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~--D~~~VIhv~~e~D~ll~ 167 (229)
.+.++++....|-... ..=++|.++|++..||...... .+.+..|+|..+..+...... ...|.|..++..-+.|.
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~ 84 (109)
T 1wgq_A 5 SSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFK 84 (109)
T ss_dssp CCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEE
Confidence 4677888888887553 3458999999999998886543 566788999998777665432 24566665544458888
Q ss_pred cCcHHHHHHHHHHH
Q 027012 168 STRKTEIVTVLVEA 181 (229)
Q Consensus 168 s~~ktElvt~L~~~ 181 (229)
++...|+-..+...
T Consensus 85 a~s~~e~~~Wi~al 98 (109)
T 1wgq_A 85 ADDAHSTQRWIDAF 98 (109)
T ss_dssp CSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 88877776665543
No 14
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=92.22 E-value=2.2 Score=31.40 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=62.7
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEec--CeEEEecCC--cceeEEEeeccccceEEEecc----------CCcEEEE
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITD--FAIYLVDPE--TDALKRRIALAAVEKMCLSEL----------SDNFFAI 156 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd--~aiY~ld~~--~~klKrrIpL~~I~gVSvS~~----------~D~~~VI 156 (229)
...|+.+..+.|-... ..-++|.++|++ ..||-.+.. ..+.+..|+|....-+.+... ....|.|
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I 94 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKV 94 (129)
T ss_dssp CSEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEE
T ss_pred CCCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEE
Confidence 3678999999998763 345899999993 577777653 456677899987544444433 3456777
Q ss_pred EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 157 IIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 157 hv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
..++..-+.|.++...|.-.++...
T Consensus 95 ~~~~~r~~~l~a~s~~e~~~Wi~al 119 (129)
T 1x1g_A 95 ITKDDTHYYIQASSKAERAEWIEAI 119 (129)
T ss_dssp CCTTCCCEEECCSSHHHHHHHHHHH
T ss_pred EcCCCCEEEEEcCCHHHHHHHHHHH
Confidence 7776557889888877776665543
No 15
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.11 E-value=2.4 Score=30.45 Aligned_cols=92 Identities=11% Similarity=0.144 Sum_probs=64.3
Q ss_pred CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec----cCCcEEEEEeCCCCCe
Q 027012 92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE----LSDNFFAIIIPSEYDL 164 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~----~~D~~~VIhv~~e~D~ 164 (229)
++.|+.+..+.|-.. ...-++|.++|++..||..... ..+.+..|+|..+.-..+.+ .....|.|..++...+
T Consensus 8 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~ 87 (117)
T 2d9y_A 8 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTY 87 (117)
T ss_dssp SCCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEE
T ss_pred CCCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEE
Confidence 467899999999863 3355899999999999888643 35678889999875222222 1223566655666789
Q ss_pred eeecCcHHHHHHHHHHHHh
Q 027012 165 LMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 165 ll~s~~ktElvt~L~~~~~ 183 (229)
.|.++...|.-.++...-.
T Consensus 88 ~l~a~s~~e~~~Wi~al~~ 106 (117)
T 2d9y_A 88 FFSAESPEEQEAWIQAMGE 106 (117)
T ss_dssp EEECSSHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHH
Confidence 9999888877766655443
No 16
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=91.88 E-value=2.7 Score=30.53 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=62.2
Q ss_pred CCccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec-c----CCcEEEEEeCCCC
Q 027012 91 GDKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE-L----SDNFFAIIIPSEY 162 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~-~----~D~~~VIhv~~e~ 162 (229)
.+..|+.+..+.|-.. ...-++|.++|++..||-.... ..+.+..|+|..+. |.... . ....|.|..++..
T Consensus 7 p~~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-v~~~~~~~~~~~~~~f~i~~~~~r 85 (123)
T 1upq_A 7 PNLPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYN-IRPDGPGAPRGRRFTFTAEHPGMR 85 (123)
T ss_dssp TTSCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCE-EEECCSSCTTSSSSEEEEECTTSC
T ss_pred CCCCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCE-EEECCCCccCCCcEEEEEECCCCe
Confidence 3467999999999864 2345899999999999888543 35667889988864 33321 1 2234455556557
Q ss_pred CeeeecCcHHHHHHHHHHHH
Q 027012 163 DLLMASTRKTEIVTVLVEAT 182 (229)
Q Consensus 163 D~ll~s~~ktElvt~L~~~~ 182 (229)
-++|.++...|+-.++...-
T Consensus 86 ~~~l~a~s~~e~~~Wi~al~ 105 (123)
T 1upq_A 86 TYVLAADTLEDLRGWLRALG 105 (123)
T ss_dssp CEEEECSSHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHH
Confidence 88998888777766655443
No 17
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.86 E-value=2.6 Score=30.21 Aligned_cols=89 Identities=10% Similarity=0.100 Sum_probs=62.7
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEecc----CCcEEEEEeC------
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSEL----SDNFFAIIIP------ 159 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~----~D~~~VIhv~------ 159 (229)
.+.++.+..+.|-... ..-++|.++|++..||-..... .+.+..|+|....-+.+.+. ....|.|..+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~ 84 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNR 84 (118)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCC
T ss_pred CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcccccc
Confidence 4678899999998753 3458999999999998886543 46678899998866655432 1335666653
Q ss_pred -CCCCeeeecCcHHHHHHHHHH
Q 027012 160 -SEYDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 160 -~e~D~ll~s~~ktElvt~L~~ 180 (229)
...-+.|.++...|+-.++..
T Consensus 85 ~~~~~~~l~a~s~~e~~~Wi~a 106 (118)
T 1v89_A 85 MGQDSYVLMASSQAEMEEWVKF 106 (118)
T ss_dssp SSCCCEEEECSSHHHHHHHHHH
T ss_pred CCCcEEEEECCCHHHHHHHHHH
Confidence 456788888877776555443
No 18
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=91.73 E-value=2.9 Score=30.58 Aligned_cols=89 Identities=13% Similarity=0.200 Sum_probs=63.6
Q ss_pred CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEec-----cCCcEEEEEeCCCCC
Q 027012 92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSEYD 163 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e~D 163 (229)
++.|+.+..+.|-.. ...-++|.++|++..||..... ....+..|+|..+. |.... .....|.|..++...
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i~~~~~r~ 96 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQ-IALLTSEDHINRKYAFKAAHPNMRT 96 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGSE-EEECCGGGCCSSCSEEEEECSSSCC
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCceE-EEEcCCcccCCCCeEEEEEcCCCCE
Confidence 467889999988865 2355899999999999888643 35678889998764 33322 223466777676678
Q ss_pred eeeecCcHHHHHHHHHHH
Q 027012 164 LLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 164 ~ll~s~~ktElvt~L~~~ 181 (229)
+.|.++...|+-.++...
T Consensus 97 ~~l~a~s~~e~~~Wi~al 114 (128)
T 2dkp_A 97 YYFCTDTGKEMELWMKAM 114 (128)
T ss_dssp EEEECSSHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHH
Confidence 999998877776665544
No 19
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=91.58 E-value=1.2 Score=36.47 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=61.8
Q ss_pred CceeeeEEEEecCe-----E--EEecC---CcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecC---cHHHH
Q 027012 108 GKMKRRILLITDFA-----I--YLVDP---ETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAST---RKTEI 174 (229)
Q Consensus 108 gK~~~R~LiITd~a-----i--Y~ld~---~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~---~ktEl 174 (229)
+...+|+|+|+-.+ + |+... ..|++.+.-+|.+|+.|..-+..+.-|.|++. -.|.-++. .+.-|
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~~~~gF~ltl~--K~Y~W~a~s~~Er~~F 139 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLEISEGFILTMS--KKYYWETNSAKERTVF 139 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSSCTTEEEEESS--SEEEEECSSHHHHHHH
T ss_pred CCccceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCCCCCcEEEEeC--CeEEEecCCHHHHHHH
Confidence 56789999985443 3 44422 35999999999999999986656666789983 57777664 34559
Q ss_pred HHHHHHHHhccCC-Cee--EEE
Q 027012 175 VTVLVEATKGASE-ELE--VAF 193 (229)
Q Consensus 175 vt~L~~~~~~~~~-~L~--V~~ 193 (229)
+..|.+.|.+-++ ..| ++|
T Consensus 140 I~sL~K~y~ky~~G~~P~l~n~ 161 (171)
T 3hie_A 140 IKSLITLYIQTFEGHVPELVNW 161 (171)
T ss_dssp HHHHHHHHHHTSCSSCCTTEEE
T ss_pred HHHHHHHHHHHcCCCCCeEecc
Confidence 9999999998774 544 455
No 20
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=90.19 E-value=3.4 Score=29.61 Aligned_cols=90 Identities=7% Similarity=0.096 Sum_probs=60.4
Q ss_pred CccEEEeeeEEEeCC-CCceeeeEEEE-ecCeEEEecCC-cceeEEEeeccccc-------eEE---EeccC--CcEEEE
Q 027012 92 DKQVLFADKILKFTG-SGKMKRRILLI-TDFAIYLVDPE-TDALKRRIALAAVE-------KMC---LSELS--DNFFAI 156 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr-~gK~~~R~LiI-Td~aiY~ld~~-~~klKrrIpL~~I~-------gVS---vS~~~--D~~~VI 156 (229)
.-.|+.+..+.|-.. ...-++|.++| ++..|+-.... ..+.+..|+|.... .|. ..... ...|.|
T Consensus 2 ~~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i 81 (112)
T 3aj4_A 2 SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQI 81 (112)
T ss_dssp CCSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEE
T ss_pred CcceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEE
Confidence 345778888888765 33458999999 88888666543 35667778877532 222 22222 236777
Q ss_pred EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 157 IIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 157 hv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
..++..-+.|.++...|+-.++...
T Consensus 82 ~~~~~r~~~l~a~s~~e~~~Wi~al 106 (112)
T 3aj4_A 82 VCRDGKTISLCAESTDDCLAWKFTL 106 (112)
T ss_dssp EETTSCEEEEECSSHHHHHHHHHHH
T ss_pred EecCCcEEEEEeCCHHHHHHHHHHH
Confidence 7776678999998888887776544
No 21
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=89.21 E-value=2.5 Score=32.95 Aligned_cols=86 Identities=12% Similarity=0.260 Sum_probs=59.3
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC----cceeEEEeeccccceEEEeccCCc-----EEEEEeCCCC
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE----TDALKRRIALAAVEKMCLSELSDN-----FFAIIIPSEY 162 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~----~~klKrrIpL~~I~gVSvS~~~D~-----~~VIhv~~e~ 162 (229)
..|++...|.--+- ....++|.|+|-+..|+.+.+. .|+++-++||..| +|....|. -|-|-=+...
T Consensus 26 G~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~---~V~~~ed~~~~~~aFeI~g~~~~ 102 (132)
T 1v61_A 26 GNVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGM---VVNRLDEIEGSDCMFEITGSTVE 102 (132)
T ss_dssp CCCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTC---BCSTTCSSSSSCCCEEEECSSSC
T ss_pred CCeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEeccee---EEEeccccccCccEEEEecCCCc
Confidence 46777777776553 4577899999999999888652 5899999999866 45555442 4444433335
Q ss_pred CeeeecCcHHHHHHHHHHH
Q 027012 163 DLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 163 D~ll~s~~ktElvt~L~~~ 181 (229)
-+++.|....|.-.+|...
T Consensus 103 ~i~v~~~s~eE~~~Wl~~L 121 (132)
T 1v61_A 103 RIVVHCNNNQDFQEWMEQL 121 (132)
T ss_dssp EEEECCCCSHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHH
Confidence 6777887777766655443
No 22
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=89.20 E-value=5.1 Score=29.27 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=64.8
Q ss_pred CccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEecc--CCcEEEEEeCCCCCeeee
Q 027012 92 DKQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSEL--SDNFFAIIIPSEYDLLMA 167 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~--~D~~~VIhv~~e~D~ll~ 167 (229)
...++.+..+.|-.. ...-++|.++|++..||..... ..+.+..|+|..+..|..... ..+.|.|..+ +.-+.|.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~-~r~~~l~ 93 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFP-FRTFYLC 93 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEET-TEEEEEE
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeC-CcEEEEE
Confidence 456788888888765 3355899999999999888643 356788899999988877643 2346677765 4678888
Q ss_pred cCcHHHHHH---HHHHHHh
Q 027012 168 STRKTEIVT---VLVEATK 183 (229)
Q Consensus 168 s~~ktElvt---~L~~~~~ 183 (229)
++...|.-. .|..+..
T Consensus 94 a~s~~e~~~Wi~al~~~i~ 112 (126)
T 1fao_A 94 AKTGVEADEWIKILRWKLS 112 (126)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 877666544 4444444
No 23
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.62 E-value=5.4 Score=28.81 Aligned_cols=90 Identities=10% Similarity=0.138 Sum_probs=62.4
Q ss_pred CccEEEeeeEEEeCC--CCceeeeEEEEecCeEEEecC-CcceeEEEeeccccceEEEec----cCCcEEEEEeCCCCCe
Q 027012 92 DKQVLFADKILKFTG--SGKMKRRILLITDFAIYLVDP-ETDALKRRIALAAVEKMCLSE----LSDNFFAIIIPSEYDL 164 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr--~gK~~~R~LiITd~aiY~ld~-~~~klKrrIpL~~I~gVSvS~----~~D~~~VIhv~~e~D~ 164 (229)
++.++.+..+.|-.. ...-++|.++|++..||.... .....+..|+|..+.-..+.+ .....|.|..++..-+
T Consensus 19 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~ 98 (122)
T 2yry_A 19 NAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTY 98 (122)
T ss_dssp TCCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEE
T ss_pred CCCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEE
Confidence 467899999999863 335589999999999988854 335678889999876222222 1223566655666788
Q ss_pred eeecCcHHHHHHHHHHH
Q 027012 165 LMASTRKTEIVTVLVEA 181 (229)
Q Consensus 165 ll~s~~ktElvt~L~~~ 181 (229)
.|.++...|+-.++...
T Consensus 99 ~l~a~s~~e~~~Wi~al 115 (122)
T 2yry_A 99 FFSAESPEEQEAWIQAM 115 (122)
T ss_dssp EEECSSHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHH
Confidence 99988877776655543
No 24
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=88.47 E-value=4.9 Score=28.21 Aligned_cols=83 Identities=18% Similarity=0.239 Sum_probs=58.2
Q ss_pred eeEEEeCCC-CceeeeEEEEecCeEEEecCCc---ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHHHH
Q 027012 99 DKILKFTGS-GKMKRRILLITDFAIYLVDPET---DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTEI 174 (229)
Q Consensus 99 ~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~---~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ktEl 174 (229)
....|-... ..-++|.++|++..||-.+... ...+-.|+|.. ..|...+..+.-|.|..+++.-+.|.++...|.
T Consensus 3 G~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~-~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~ 81 (103)
T 3rcp_A 3 GVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV-CEIKVHSADNTRMELIIPGEQHFYMKAVNAAER 81 (103)
T ss_dssp EEEEEECCTTTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG-CEEECCTTCSSEEEEEETTTEEEEEECSSHHHH
T ss_pred eEEEEccCCCCCeeceEEEEECCEEEEEecCCcccCCcccEEEeee-eEEEEcCCCCceEEEEeCCCCEEEEECCCHHHH
Confidence 345555542 3458899999999998887543 23567799963 355555556667778877667889988888888
Q ss_pred HHHHHHHH
Q 027012 175 VTVLVEAT 182 (229)
Q Consensus 175 vt~L~~~~ 182 (229)
-..+...-
T Consensus 82 ~~Wi~al~ 89 (103)
T 3rcp_A 82 QRWLVALG 89 (103)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765543
No 25
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=88.22 E-value=5.5 Score=28.45 Aligned_cols=91 Identities=13% Similarity=0.093 Sum_probs=64.7
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEe--cCeEEEecCCc-ceeEEEeeccccceEEEec---------cCCcEEEEEe
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLIT--DFAIYLVDPET-DALKRRIALAAVEKMCLSE---------LSDNFFAIII 158 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiIT--d~aiY~ld~~~-~klKrrIpL~~I~gVSvS~---------~~D~~~VIhv 158 (229)
.+.++++..+.|-... ..-++|.++|+ +..||-..... .+.+..|+|..+..|.... .....|.|+.
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~ 84 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT 84 (117)
T ss_dssp CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEEC
Confidence 4677888999887653 34589999999 77888776433 5677889999998777532 1124667765
Q ss_pred CCCCCeeeecCcHHHHHHHHHHHHh
Q 027012 159 PSEYDLLMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 159 ~~e~D~ll~s~~ktElvt~L~~~~~ 183 (229)
+ +.-+.|.++...|+-.++...-.
T Consensus 85 ~-~r~~~l~a~s~~e~~~Wi~al~~ 108 (117)
T 1v5u_A 85 T-RRVYNFCAQDVPSAQQWVDRIQS 108 (117)
T ss_dssp S-SCEEEEECSSHHHHHHHHHHHHT
T ss_pred C-CceEEEECCCHHHHHHHHHHHHH
Confidence 4 46788888888888777665543
No 26
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=87.48 E-value=3.2 Score=34.34 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=64.3
Q ss_pred ccEEEeeeEEEeCCC-----CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-----cCCcEEEEEeCCC
Q 027012 93 KQVLFADKILKFTGS-----GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-----LSDNFFAIIIPSE 161 (229)
Q Consensus 93 e~VlFS~~V~Kinr~-----gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-----~~D~~~VIhv~~e 161 (229)
..++.+..+.|-... ..-++|.++|++..||-..... .+.+..|+|..+..+.... ...+.|.|..++.
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~ 183 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK 183 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCC
Confidence 578999999988752 2457899999999998886543 4668889999998776432 2235777877765
Q ss_pred CCeeeecCcHHHHHHHHHH
Q 027012 162 YDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 162 ~D~ll~s~~ktElvt~L~~ 180 (229)
.-+.|.++...|+-.++..
T Consensus 184 r~~~l~A~s~~e~~~Wi~a 202 (211)
T 1u5e_A 184 RIYQFTAASPKDAEEWVQQ 202 (211)
T ss_dssp CEEEEECSSHHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHH
Confidence 7788988877776655543
No 27
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=87.25 E-value=5.5 Score=28.41 Aligned_cols=89 Identities=11% Similarity=-0.010 Sum_probs=56.9
Q ss_pred CccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccce-EEEecc--CCcEEEEEeCCCCCeeeec
Q 027012 92 DKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEK-MCLSEL--SDNFFAIIIPSEYDLLMAS 168 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~g-VSvS~~--~D~~~VIhv~~e~D~ll~s 168 (229)
.+.+.++....|. ....-++|.++|++..||-.....-..+-.++|..... |...+. ....|.|..++..-+.|.+
T Consensus 5 ~~~~~~~G~L~K~-~~k~Wk~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A 83 (107)
T 2cof_A 5 SSGLETSSYLNVL-VNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEA 83 (107)
T ss_dssp CCCCTTCCEEEEE-ETTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEEC
T ss_pred CCCCcEeEEEEEe-cCCCcceEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEc
Confidence 3556677777777 33445799999999998777654334444555554443 444332 2346677776555688888
Q ss_pred CcHHHHHHHHHHH
Q 027012 169 TRKTEIVTVLVEA 181 (229)
Q Consensus 169 ~~ktElvt~L~~~ 181 (229)
+...|+-..+...
T Consensus 84 ~s~~e~~~Wi~al 96 (107)
T 2cof_A 84 KSSEEMGHWLGLL 96 (107)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8888877666544
No 28
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=86.75 E-value=7 Score=28.73 Aligned_cols=89 Identities=18% Similarity=0.155 Sum_probs=58.6
Q ss_pred CccEEEeeeEEEeC--C-CCceeeeEEEEecCeEEEecC----CcceeEEEeeccccce--EEEec----cCCcEEEEEe
Q 027012 92 DKQVLFADKILKFT--G-SGKMKRRILLITDFAIYLVDP----ETDALKRRIALAAVEK--MCLSE----LSDNFFAIII 158 (229)
Q Consensus 92 ~e~VlFS~~V~Kin--r-~gK~~~R~LiITd~aiY~ld~----~~~klKrrIpL~~I~g--VSvS~----~~D~~~VIhv 158 (229)
+..|.++....|-. . ...=++|.++|++..||-... ..-..+-.|+|..+.. |...+ ...+.|.|..
T Consensus 2 ~~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~ 81 (134)
T 2y7b_A 2 NSSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELIT 81 (134)
T ss_dssp CCCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEE
T ss_pred CCCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEe
Confidence 46788888988872 2 234589999999999988863 2245677799998653 65543 2334556655
Q ss_pred --CCCC-----------------CeeeecCcHHHHHHHHHH
Q 027012 159 --PSEY-----------------DLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 159 --~~e~-----------------D~ll~s~~ktElvt~L~~ 180 (229)
|... -++|+++...|+-..+..
T Consensus 82 ~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~a 122 (134)
T 2y7b_A 82 VRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQK 122 (134)
T ss_dssp EEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHH
T ss_pred cCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHH
Confidence 4321 378888877776655443
No 29
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.46 E-value=5.8 Score=29.99 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=59.4
Q ss_pred CccEEEeeeEEEeCCCC-------ceeeeEEEEecC-----eEEEecCC--cceeEEEeeccccceEEEec-cCCcEEEE
Q 027012 92 DKQVLFADKILKFTGSG-------KMKRRILLITDF-----AIYLVDPE--TDALKRRIALAAVEKMCLSE-LSDNFFAI 156 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~g-------K~~~R~LiITd~-----aiY~ld~~--~~klKrrIpL~~I~gVSvS~-~~D~~~VI 156 (229)
.+.++.+..+.|-...+ .-++|.++|++. .|+-.... ....+..|+|..+..+...+ .....|.|
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~~~~~~~F~i 94 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNNKVRRFAFEL 94 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCCSSCTTEEEE
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCCCCCceEEEE
Confidence 36678888888876432 347899999985 66555433 34577889999987665443 33456777
Q ss_pred EeCCCCCeeeecCcHHHHHHHH
Q 027012 157 IIPSEYDLLMASTRKTEIVTVL 178 (229)
Q Consensus 157 hv~~e~D~ll~s~~ktElvt~L 178 (229)
..++...++|.++...|+-.++
T Consensus 95 ~~~~~r~~~l~A~s~~e~~~Wi 116 (150)
T 1wg7_A 95 KMQDKSSYLLAADSEVEMEEWI 116 (150)
T ss_dssp ECSSSCEEEEECSSHHHHHHHH
T ss_pred EeCCCcEEEEEeCCHHHHHHHH
Confidence 7775568889887766654443
No 30
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=84.71 E-value=11 Score=31.10 Aligned_cols=91 Identities=12% Similarity=0.235 Sum_probs=66.1
Q ss_pred CccEEEeeeEEEeCCC------CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCe
Q 027012 92 DKQVLFADKILKFTGS------GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDL 164 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~------gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ 164 (229)
.+.++.+....|-... ..-+.|.++|++..|+-..... .+.+..|+|..+..+.-.......|.|..+ +.-+
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~-~r~~ 133 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMA-DRTF 133 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEETTTTSEEEEECS-SCEE
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCCCCCcEEEEEcC-CcEE
Confidence 3567788888887652 3447999999999998876543 467888999999887766666677777654 4678
Q ss_pred eeecCcHHHHH---HHHHHHHh
Q 027012 165 LMASTRKTEIV---TVLVEATK 183 (229)
Q Consensus 165 ll~s~~ktElv---t~L~~~~~ 183 (229)
.|+++...|+- ..|..+..
T Consensus 134 ~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 134 HLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEcCCHHHHHHHHHHHHHHHh
Confidence 88888777764 44555443
No 31
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=81.74 E-value=1.2 Score=35.25 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=44.9
Q ss_pred cCCcceeEEEeeccccceEEEecc-----CCcEEEEEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 126 DPETDALKRRIALAAVEKMCLSEL-----SDNFFAIIIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 126 d~~~~klKrrIpL~~I~gVSvS~~-----~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
.|+.-+.|..|+++.|..|..++- .+|.|||++...-+|+|+...-.++-++|...
T Consensus 65 PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~I 125 (136)
T 1v5m_A 65 PPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADI 125 (136)
T ss_dssp STTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHH
T ss_pred CCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHH
Confidence 355678899999999999987643 47899999987779999998877877777554
No 32
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=80.68 E-value=13 Score=31.83 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=60.6
Q ss_pred CccEEEeeeEEEeCCCCceeeeEEEEecC-------eEEEecCCc------ceeEEEeeccccceEEEec--cCCcEEEE
Q 027012 92 DKQVLFADKILKFTGSGKMKRRILLITDF-------AIYLVDPET------DALKRRIALAAVEKMCLSE--LSDNFFAI 156 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~-------aiY~ld~~~------~klKrrIpL~~I~gVSvS~--~~D~~~VI 156 (229)
.+.|+.+..+.|- ..-++|.++|.+. .|+-.+..+ -+.+..|+|..+..|.... ...+.|.|
T Consensus 7 ~~~v~k~G~L~K~---K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I 83 (264)
T 1qqg_A 7 FSDVRKVGYLRKP---KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVAL 83 (264)
T ss_dssp --CEEEEEEEECT---TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEE
T ss_pred CCCccEEEEEEEC---CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEEE
Confidence 4678899999886 3457899999988 777776543 2578889999998776543 23457778
Q ss_pred EeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 157 IIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 157 hv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
..+ +.-+.|.++...|+-.++...
T Consensus 84 ~t~-~rty~l~A~se~e~~~Wi~aL 107 (264)
T 1qqg_A 84 YTR-DEHFAIAADSEAEQDSWYQAL 107 (264)
T ss_dssp EES-SCEEEEECSSHHHHHHHHHHH
T ss_pred EEC-CEEEEEEeCCHHHHHHHHHHH
Confidence 776 568888888777766555443
No 33
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=80.67 E-value=19 Score=28.38 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=55.6
Q ss_pred EEEeeeEEEeCCCC------ceeeeEEEEecCeEEEecC-----CcceeEEEeeccccceEEEecc-CC-----------
Q 027012 95 VLFADKILKFTGSG------KMKRRILLITDFAIYLVDP-----ETDALKRRIALAAVEKMCLSEL-SD----------- 151 (229)
Q Consensus 95 VlFS~~V~Kinr~g------K~~~R~LiITd~aiY~ld~-----~~~klKrrIpL~~I~gVSvS~~-~D----------- 151 (229)
|+.+....|=...+ .-++|.+||++..|+-.+. ...+.+..|||..+..|..... .+
T Consensus 3 vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~ 82 (169)
T 1btk_A 3 VILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRG 82 (169)
T ss_dssp CCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC----
T ss_pred eEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhccccccc
Confidence 56677777754221 2589999999999987773 3467888999999877654311 11
Q ss_pred ----------------cEEEEEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 152 ----------------NFFAIIIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 152 ----------------~~~VIhv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
..|-|..+ +..+.|+++.-.|.-.+|...
T Consensus 83 ~~~~~~~~~~i~~~~~~~F~I~t~-~rt~yl~A~s~~E~~eWi~aI 127 (169)
T 1btk_A 83 EESSEMEQISIIERFPYPFQVVYD-EGPLYVFSPTEELRKRWIHQL 127 (169)
T ss_dssp -----CCTTHHHHCCCEEEEEEET-TCCEEEEESCHHHHHHHHHHH
T ss_pred CcccccccccccccccccEEEEeC-CceEEEEcCCHHHHHHHHHHH
Confidence 33444444 367888777666655554443
No 34
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=80.02 E-value=9.6 Score=33.33 Aligned_cols=82 Identities=17% Similarity=0.308 Sum_probs=57.6
Q ss_pred EEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-------cceeEEEeeccccceEEEeccCCcEEEEEeCC-CCCeee
Q 027012 96 LFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-------TDALKRRIALAAVEKMCLSELSDNFFAIIIPS-EYDLLM 166 (229)
Q Consensus 96 lFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-------~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~-e~D~ll 166 (229)
+|..-+ ++.. .+ +-.|=|.++++=++..+ ..++-.-.++++|+.|.++ .|+.|.|...+ ..-+.|
T Consensus 192 vf~~~~-~l~~~~~---~V~lkIG~~~lQi~~~~k~~i~~~~~~~nDVy~lsdI~ev~~~--~~~eFti~~~n~~~~l~f 265 (290)
T 3peg_A 192 VFHNAL-KLAHKDT---KVSIKVGSTAVQVTSAERTKVLGQSVFLNDIYYASEIEEICLV--DENQFTLTIANQGTPLTF 265 (290)
T ss_dssp EEEEEE-ECSSSCE---EEEEEECSSEEEEEESSCEEETTEEECCEEEEETTTEEEEEEE--ETTEEEEEETTCSSCEEE
T ss_pred Eeecce-eecccCC---CEEEEECCCEEEEEEeccEEccccCceeEEEEEeeeeeEEEec--CCCceEEEEeCCcEEEEE
Confidence 555555 4443 33 34455666666555432 3556677899999999987 67788899844 459999
Q ss_pred ecCcHHHHHHHHHHHHh
Q 027012 167 ASTRKTEIVTVLVEATK 183 (229)
Q Consensus 167 ~s~~ktElvt~L~~~~~ 183 (229)
.|+.+.||+-.|..+--
T Consensus 266 ~S~~~~eIv~~i~~a~~ 282 (290)
T 3peg_A 266 MHQECEAIVQSIIHIRT 282 (290)
T ss_dssp ECTTHHHHHHHHHHHHH
T ss_pred eCcCHHHHHHHHHHHHH
Confidence 99999999999887754
No 35
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=78.45 E-value=28 Score=30.21 Aligned_cols=85 Identities=13% Similarity=0.243 Sum_probs=54.6
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC------------cceeEEEeeccccceEEEeccC---CcEEEEE
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE------------TDALKRRIALAAVEKMCLSELS---DNFFAII 157 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~------------~~klKrrIpL~~I~gVSvS~~~---D~~~VIh 157 (229)
...+..+.+.+. |+.++|.++|-+..|....++ +|++|..|||..+. |.-.+.. .+.|.|.
T Consensus 245 r~li~eG~l~~~---g~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~-v~~~~d~~~~~~~F~i~ 320 (354)
T 1dbh_A 245 NEFIMEGTLTRV---GAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQ-INDKDDTNEYKHAFEII 320 (354)
T ss_dssp CCEEEEEEEEET---TCSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCE-EEECCCSSSCCSEEEEC
T ss_pred ceEEEEeeEEEE---ecCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceE-EEeCCcccccCccEEEe
Confidence 567777777777 567778887777777666553 47889999999884 3322222 2455565
Q ss_pred eCCCCCeeeecCcHHHHHHHHHHH
Q 027012 158 IPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 158 v~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
.+++.-++|.+....|--.++...
T Consensus 321 ~~~~~~~~l~a~s~~ek~~W~~~i 344 (354)
T 1dbh_A 321 LKDENSVIFSAKSAEEKNNWMAAL 344 (354)
T ss_dssp CTTSCCEEEECSSHHHHHHHHHHH
T ss_pred cCCCCEEEEEeCCHHHHHHHHHHH
Confidence 554456778776655555454443
No 36
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=78.34 E-value=20 Score=27.13 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=45.1
Q ss_pred CCccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCC-cEEEEEeCC
Q 027012 91 GDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSD-NFFAIIIPS 160 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D-~~~VIhv~~ 160 (229)
+...|+.+....|=+....=++|.+||.+..||-..... ...+-.|+|...+-+......+ ..|-|..|.
T Consensus 4 ~~~~v~k~GwL~K~g~~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~ 75 (130)
T 1v88_A 4 GSSGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPL 75 (130)
T ss_dssp SSSSCCEEEEEEECCSSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCCCTTTSSCEEEEECTT
T ss_pred CCCceEEEeEEEEeCCCCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEECCCCCCCeEEEEEcCC
Confidence 456788999998855222448999999999998886443 4567778888764222222233 345555443
No 37
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=77.59 E-value=18 Score=26.24 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=49.7
Q ss_pred eeeEEEEecCeEEEecCCc-ceeEEEeeccccce--EEE--eccCCcEEEEEeCCCCCeeeecCcHHHHHHHHHHHHh
Q 027012 111 KRRILLITDFAIYLVDPET-DALKRRIALAAVEK--MCL--SELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~g--VSv--S~~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~~~ 183 (229)
++|.++|.+..||.....+ ......|||...+. +.. .....+.|-|..++..-|+|+.+.-.|+-..|...-.
T Consensus 21 k~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~ 98 (112)
T 3cxb_B 21 KTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQ 98 (112)
T ss_dssp EEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 6899999999999997543 34456688774322 222 2334567778777767899999888887766655544
No 38
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=77.37 E-value=20 Score=26.82 Aligned_cols=89 Identities=12% Similarity=0.182 Sum_probs=60.4
Q ss_pred ccEEEeeeEEEeCC--CCceeeeEEEEe---cCeEEEecC-----CcceeEEEeeccccceEEEec--cC---CcEEEEE
Q 027012 93 KQVLFADKILKFTG--SGKMKRRILLIT---DFAIYLVDP-----ETDALKRRIALAAVEKMCLSE--LS---DNFFAII 157 (229)
Q Consensus 93 e~VlFS~~V~Kinr--~gK~~~R~LiIT---d~aiY~ld~-----~~~klKrrIpL~~I~gVSvS~--~~---D~~~VIh 157 (229)
....++....|-.+ ...-++|.++|+ +.-+|-.+. ..-+.+..|+|..+..|+..+ .. ...|+|+
T Consensus 13 ~~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~ 92 (126)
T 1v5p_A 13 RQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVIN 92 (126)
T ss_dssp CCCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEE
T ss_pred CCCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEE
Confidence 33456777888752 445689999998 555666542 335677889999988888643 11 2356777
Q ss_pred eCCCCCeeeecCcHHHHHHHHHHHH
Q 027012 158 IPSEYDLLMASTRKTEIVTVLVEAT 182 (229)
Q Consensus 158 v~~e~D~ll~s~~ktElvt~L~~~~ 182 (229)
.+ ..-|.|.++.-.|+-.++...-
T Consensus 93 t~-~r~y~l~A~s~~e~~~Wi~al~ 116 (126)
T 1v5p_A 93 AL-SQRYFLQANDQKDLKDWVEALN 116 (126)
T ss_dssp CS-SCEEEEECSSHHHHHHHHHHHH
T ss_pred CC-CEEEEEECCCHHHHHHHHHHHH
Confidence 54 4679999988888776665543
No 39
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=76.96 E-value=17 Score=28.39 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=56.2
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeee---cC-cHHHHHHHHHHHHh
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMA---ST-RKTEIVTVLVEATK 183 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~---s~-~ktElvt~L~~~~~ 183 (229)
+.++-.|.|+...|.++|+.+-.+....||..|+-++--+....+|..-..++...++. +. .-.+++..|.+++.
T Consensus 59 ~~~~v~L~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~~~~h~f~v~~s~~~A~~I~~tigqAF~ 137 (152)
T 1ntv_A 59 HKQKIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGNHRFVAIKTAQAAEPVILDLRDLFQ 137 (152)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCCEEEEEEESSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCeEEEEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEcCCeEEEEEEccHHHHHHHHHHHHHHHH
Confidence 45677788999999999998878888899999988887665556777777655444443 23 33678888888876
No 40
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=76.38 E-value=21 Score=26.62 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=55.2
Q ss_pred CccEEEeeeEEE--eCCCCc-----eeeeEEEEecCeEEEecCCc------------ceeEEEeeccccceEEEec--cC
Q 027012 92 DKQVLFADKILK--FTGSGK-----MKRRILLITDFAIYLVDPET------------DALKRRIALAAVEKMCLSE--LS 150 (229)
Q Consensus 92 ~e~VlFS~~V~K--inr~gK-----~~~R~LiITd~aiY~ld~~~------------~klKrrIpL~~I~gVSvS~--~~ 150 (229)
...+..+..+.| +...|+ =..|.++|++..||.....+ ......|+|....-..... ..
T Consensus 9 ~~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kr 88 (129)
T 2p0d_A 9 SHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSR 88 (129)
T ss_dssp CCSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCSS
T ss_pred CcceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCCC
Confidence 356677777765 222332 25899999999998886542 2455678887653222111 12
Q ss_pred CcEEEEEeCCCCCeeeecCcHHHHHHHHHH
Q 027012 151 DNFFAIIIPSEYDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 151 D~~~VIhv~~e~D~ll~s~~ktElvt~L~~ 180 (229)
.+.|-|..++...|+|+++.-.|+-..+..
T Consensus 89 ~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~a 118 (129)
T 2p0d_A 89 RNVLHIRTIPGHEFLLQSDHETELRAWHRA 118 (129)
T ss_dssp SSEEEEECTTSCEEEEECSCHHHHHHHHHH
T ss_pred CcEEEEEcCCCCEEEEECCCHHHHHHHHHH
Confidence 367788777656799999887776555443
No 41
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=75.64 E-value=23 Score=26.49 Aligned_cols=87 Identities=8% Similarity=-0.019 Sum_probs=57.4
Q ss_pred EEEeeeEEEeCCCC-ceeeeEEEEecCeEEEecCC----cceeEEEeeccccceEEEecc----------CCcEEEEEeC
Q 027012 95 VLFADKILKFTGSG-KMKRRILLITDFAIYLVDPE----TDALKRRIALAAVEKMCLSEL----------SDNFFAIIIP 159 (229)
Q Consensus 95 VlFS~~V~Kinr~g-K~~~R~LiITd~aiY~ld~~----~~klKrrIpL~~I~gVSvS~~----------~D~~~VIhv~ 159 (229)
++.+....|-.+.. .-++|.+|||+..||-.... .-...-.|+|..-+-..++.. ...-|+|+.+
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~ 85 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAK 85 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEES
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeC
Confidence 56677777766644 45899999999988877432 223566788865422222222 3347888887
Q ss_pred CCC------CeeeecCcHHHHHHHHHHH
Q 027012 160 SEY------DLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 160 ~e~------D~ll~s~~ktElvt~L~~~ 181 (229)
+.+ .++|..+...|+-.++...
T Consensus 86 ~~~~~~~~~~y~f~A~s~~e~~~Wv~aI 113 (120)
T 4a6h_A 86 QNGIIRRGHNWVFKADSYESMMSWFDNL 113 (120)
T ss_dssp SSSSSCTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCCcccCceEEEEEcCCHHHHHHHHHHH
Confidence 643 8999888888877666543
No 42
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=75.56 E-value=20 Score=28.56 Aligned_cols=86 Identities=20% Similarity=0.193 Sum_probs=57.2
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC--CCeeeecCc
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE--YDLLMASTR 170 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e--~D~ll~s~~ 170 (229)
+--+|...... ....++.+..|-|+...|+++++.+..+....|+++|..++.+ ++.|.|.+.+. .-+.+.++.
T Consensus 115 G~~~f~v~~~~-~g~~~~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~---~~~f~i~~~~~~~~~~~~~t~~ 190 (206)
T 1mix_A 115 GVSFFLVKEKM-KGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDGYYSVQTTE 190 (206)
T ss_dssp TCEEEEEEECC-SSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEC---SSEEEEECGGGSSSCEEEECSC
T ss_pred CceEEEEEEcc-CCCCCcCcEEEEEcccceEEeCCCCCceeeeeehhHeeecccC---CCEEEEEeCcccceEEEEECCc
Confidence 45566554321 0133557889999999999999877777788999999988864 45567877432 346666655
Q ss_pred HHHHHHHHHHHHh
Q 027012 171 KTEIVTVLVEATK 183 (229)
Q Consensus 171 ktElvt~L~~~~~ 183 (229)
- +.++.|+..|-
T Consensus 191 ~-~~i~~Li~~Yi 202 (206)
T 1mix_A 191 G-EQIAQLIAGYI 202 (206)
T ss_dssp H-HHHHHHHHTTS
T ss_pred H-HHHHHHHHHHH
Confidence 4 44555555543
No 43
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=75.43 E-value=23 Score=30.11 Aligned_cols=86 Identities=17% Similarity=0.310 Sum_probs=57.9
Q ss_pred CccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC------cceeEEEeeccccceEEEeccCCcEEEEEeCCC-CCe
Q 027012 92 DKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSELSDNFFAIIIPSE-YDL 164 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~------~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e-~D~ 164 (229)
+-+ .|+. |.+++...+ +-.|=|.++++=++..+ ..++-.-.++++|+.|+ +..|+.|.|...++ .-+
T Consensus 156 d~r-vf~~-v~~l~~~~~--pV~lkIG~~~~qi~~~~~~i~~~~~~~ndVy~ls~i~~v~--t~~~~eFtl~~~n~~~~l 229 (256)
T 3pg7_A 156 DLK-VFHN-ALKLAHKDT--KVSIKVGSTAVQVTSAERTVLGQSVFLNDIYYASEIEEIC--LVDENQFTLTIANQGTPL 229 (256)
T ss_dssp SCE-EEEE-EEEESSSCE--EEEEEECSSEEEEEESCEEETTEEECCEEEEEGGGEEEEE--EEETTEEEEEETTCCSCE
T ss_pred cce-eecc-ceeeccCCC--cEEEEECCCEEEEEEEEeEecCCcceeEEEEEeeeeEEEe--cCCCCCeEEEEeCCcEEE
Confidence 444 4555 566776432 44555555555444332 23455668899999974 46788889998544 479
Q ss_pred eeecCcHHHHHHHHHHHHh
Q 027012 165 LMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 165 ll~s~~ktElvt~L~~~~~ 183 (229)
.|.|+.+.|||-.|..+--
T Consensus 230 ~f~S~~~~eIv~~i~~a~~ 248 (256)
T 3pg7_A 230 TFMHQECEAIVQSIIHIRT 248 (256)
T ss_dssp EEECTTHHHHHHHHHHHHH
T ss_pred EEeCcCHHHHHHHHHHHHH
Confidence 9999999999999887754
No 44
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=74.83 E-value=24 Score=26.41 Aligned_cols=75 Identities=20% Similarity=0.264 Sum_probs=53.0
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC--C---CeeeecCc---HHHHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE--Y---DLLMASTR---KTEIVTVLVE 180 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e--~---D~ll~s~~---ktElvt~L~~ 180 (229)
+.++-.|.|+...|-++|+.+-.+-...|+..|+-.+.-+....+|..-.... . -.+|.|+. -.+++..|.+
T Consensus 42 ~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~l~~ 121 (137)
T 3so6_A 42 KLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQ 121 (137)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTEEEEEEECSSSSCEEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCEEEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 45667788999999999987766767789999988777555555666655332 2 34566653 4567778877
Q ss_pred HHh
Q 027012 181 ATK 183 (229)
Q Consensus 181 ~~~ 183 (229)
+++
T Consensus 122 AF~ 124 (137)
T 3so6_A 122 AFK 124 (137)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 45
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=73.73 E-value=31 Score=27.13 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=57.4
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeec---C-cHHHHHHHHHHHHh
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMAS---T-RKTEIVTVLVEATK 183 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s---~-~ktElvt~L~~~~~ 183 (229)
+++.-.|.|+.+.|-++|+.+-.+....||..|+-.+.-+....+|..-..+++-.++.+ . .-.+++..|.+++.
T Consensus 58 ~~~~V~L~IS~~GI~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~~~h~c~vf~s~~~A~~I~~tigqAF~ 136 (160)
T 1p3r_A 58 HKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQ 136 (160)
T ss_dssp CCEEEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTTCEEEEEEEESSCSHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCeEEEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecCCEEEEEEEccHHHHHHHHHHHHHHHH
Confidence 556777889999999999988777788999999999987776678877776655555433 2 23567888888876
No 46
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=73.38 E-value=28 Score=26.65 Aligned_cols=70 Identities=6% Similarity=0.091 Sum_probs=46.5
Q ss_pred eeeEEEEecCeEEEecCCc--------c--eeEEEeeccccceEEEecc--CCcEEEEEeCCCC-CeeeecCcHHHHHHH
Q 027012 111 KRRILLITDFAIYLVDPET--------D--ALKRRIALAAVEKMCLSEL--SDNFFAIIIPSEY-DLLMASTRKTEIVTV 177 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~--------~--klKrrIpL~~I~gVSvS~~--~D~~~VIhv~~e~-D~ll~s~~ktElvt~ 177 (229)
+++.++|+.+.||..++++ + .-...|||....-. +... ..+.|-|..++.| -|+|.++...|+..+
T Consensus 25 kr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W 103 (126)
T 2dtc_A 25 TRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILW 103 (126)
T ss_dssp EEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHH
T ss_pred ccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHH
Confidence 8999999999999999764 2 22345777664322 3222 3467888877444 588888888777655
Q ss_pred HHHH
Q 027012 178 LVEA 181 (229)
Q Consensus 178 L~~~ 181 (229)
+...
T Consensus 104 ~~ai 107 (126)
T 2dtc_A 104 HKHL 107 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 47
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=72.63 E-value=51 Score=29.33 Aligned_cols=91 Identities=18% Similarity=0.267 Sum_probs=57.6
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-----cceeEEEeeccccceEEEeccCC--------cEEEEEe
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-----TDALKRRIALAAVEKMCLSELSD--------NFFAIII 158 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-----~~klKrrIpL~~I~gVSvS~~~D--------~~~VIhv 158 (229)
...+..+.+.++.. .|+.++|.++|=+..|....++ .|..+.+|||+.+.=..+....+ +.|-|+.
T Consensus 255 r~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~ 334 (402)
T 2dfk_A 255 SELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHN 334 (402)
T ss_dssp CCEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEE
T ss_pred cceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEE
Confidence 46788888888887 6888999999988888777653 47889999998763222221111 3455555
Q ss_pred CC-CCCeeeecCc---HHHHHHHHHHHHh
Q 027012 159 PS-EYDLLMASTR---KTEIVTVLVEATK 183 (229)
Q Consensus 159 ~~-e~D~ll~s~~---ktElvt~L~~~~~ 183 (229)
+. +.-++|++.. |.+-+..|..+..
T Consensus 335 ~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~ 363 (402)
T 2dfk_A 335 KETEEVHLFFAKKLEEKIRWLRAFREERK 363 (402)
T ss_dssp SSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 43 3345666643 4445555555443
No 48
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=72.60 E-value=26 Score=25.84 Aligned_cols=91 Identities=11% Similarity=0.169 Sum_probs=60.1
Q ss_pred CCccEEEeeeEEEeCCCC-ceeeeEEEE-ecCeEEEecCCc-ceeEEEeecc-ccceEEE-------e----ccCCcEEE
Q 027012 91 GDKQVLFADKILKFTGSG-KMKRRILLI-TDFAIYLVDPET-DALKRRIALA-AVEKMCL-------S----ELSDNFFA 155 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~g-K~~~R~LiI-Td~aiY~ld~~~-~klKrrIpL~-~I~gVSv-------S----~~~D~~~V 155 (229)
+.+.|+.+....|-.... .=++|.++| ++..|+-.+... ...+..|++. .+..|.+ . ......|.
T Consensus 4 ~~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~ 83 (130)
T 2d9v_A 4 GSSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLT 83 (130)
T ss_dssp SCCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEE
T ss_pred CCCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEE
Confidence 457899999999986533 448999999 898887776543 4556667665 2333332 1 11235677
Q ss_pred EEeCCCCCeeeecCcHHHHHHHHHHH
Q 027012 156 IIIPSEYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 156 Ihv~~e~D~ll~s~~ktElvt~L~~~ 181 (229)
|..++..-+.|+++...|+-.++...
T Consensus 84 I~~~~~r~~~l~A~s~~e~~~Wi~al 109 (130)
T 2d9v_A 84 VNLREGSRLHLCAETRDDAIAWKTAL 109 (130)
T ss_dssp EEETTSCEEEEECSSHHHHHHHHHHH
T ss_pred EEeCCCCEEEEEcCCHHHHHHHHHHH
Confidence 77665457889888888776665543
No 49
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=72.47 E-value=19 Score=28.33 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=56.0
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC----------CCeeeecC-cHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE----------YDLLMAST-RKTEIVTV 177 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e----------~D~ll~s~-~ktElvt~ 177 (229)
++++-.|.|+...|.++|+.+-.+....||..|+-.+.-+....+|..-.... .-.+|.|+ .-.+++..
T Consensus 55 ~~~~v~L~VS~~gi~l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~t 134 (160)
T 2ej8_A 55 RMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDS 134 (160)
T ss_dssp CCCEEEEEEESSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHH
T ss_pred cCCEEEEEEECCeEEEEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHH
Confidence 56677899999999999998888888899999988887655445776666332 12455665 45667778
Q ss_pred HHHHHhc
Q 027012 178 LVEATKG 184 (229)
Q Consensus 178 L~~~~~~ 184 (229)
|.+++..
T Consensus 135 igqAF~~ 141 (160)
T 2ej8_A 135 VGLAKQI 141 (160)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887764
No 50
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=72.37 E-value=32 Score=26.73 Aligned_cols=86 Identities=5% Similarity=0.072 Sum_probs=59.7
Q ss_pred CccEEEeeeEEEeCCCCc-eeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEecc---CCcEEEEEeCCCCCeee
Q 027012 92 DKQVLFADKILKFTGSGK-MKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSEL---SDNFFAIIIPSEYDLLM 166 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~gK-~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~---~D~~~VIhv~~e~D~ll 166 (229)
+..|+......|-....| =++|.++|.+..||-..... ...+..|+|...+.+..... ..+.|.|..++ ..+.|
T Consensus 15 ~~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~-r~~~f 93 (149)
T 1x1f_A 15 ALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPK-EEVQL 93 (149)
T ss_dssp SSCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECSS-CCEEE
T ss_pred CCCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcCC-CEEEE
Confidence 345899999998775433 37999999999998886543 44567899999877644322 13466777654 57888
Q ss_pred ecCcHHHHHHHH
Q 027012 167 ASTRKTEIVTVL 178 (229)
Q Consensus 167 ~s~~ktElvt~L 178 (229)
+++...|.-.++
T Consensus 94 ~A~s~ee~~eWi 105 (149)
T 1x1f_A 94 KTENTESGEEWR 105 (149)
T ss_dssp ECSSHHHHHHHH
T ss_pred EcCCHHHHHHHH
Confidence 887766654444
No 51
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=72.03 E-value=15 Score=26.54 Aligned_cols=88 Identities=14% Similarity=0.026 Sum_probs=54.1
Q ss_pred CccEEEeeeEEEeCCC-CceeeeEEEEe-cCeEEEecCC-cceeEEEeeccccceE--E---EeccCCcEEEEEeC---C
Q 027012 92 DKQVLFADKILKFTGS-GKMKRRILLIT-DFAIYLVDPE-TDALKRRIALAAVEKM--C---LSELSDNFFAIIIP---S 160 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~-gK~~~R~LiIT-d~aiY~ld~~-~~klKrrIpL~~I~gV--S---vS~~~D~~~VIhv~---~ 160 (229)
+..++.+..+.|-... ..-++|.++|+ +..|+-.... ..+.+..|||..+.-+ . ......+.|.|..+ .
T Consensus 5 ~~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~ 84 (125)
T 1unq_A 5 DVAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTT 84 (125)
T ss_dssp GGCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTE
T ss_pred CCCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCCCC
Confidence 3678899999998753 34589999999 4566555432 2334555777765421 1 12234456677654 2
Q ss_pred CCCeeeecCcHHHHHHHHH
Q 027012 161 EYDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 161 e~D~ll~s~~ktElvt~L~ 179 (229)
...+.|.++...|+-.++.
T Consensus 85 ~~~~~~~a~s~~e~~~Wi~ 103 (125)
T 1unq_A 85 VIERTFHVETPEEREEWTT 103 (125)
T ss_dssp EEEEEEECSSHHHHHHHHH
T ss_pred ceeEEEEeCCHHHHHHHHH
Confidence 3467788877777654443
No 52
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=71.51 E-value=34 Score=26.62 Aligned_cols=94 Identities=14% Similarity=0.172 Sum_probs=62.0
Q ss_pred CCccEEEeeeEEEeCCCCc------eeeeEEEEecCeEEEecCCc--ceeEEEeeccccceEEEeccC--------CcEE
Q 027012 91 GDKQVLFADKILKFTGSGK------MKRRILLITDFAIYLVDPET--DALKRRIALAAVEKMCLSELS--------DNFF 154 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~gK------~~~R~LiITd~aiY~ld~~~--~klKrrIpL~~I~gVSvS~~~--------D~~~ 154 (229)
.+..|+......|=...-| =++|.++|++..|+-.+... ...+-.|+|..+..|...... ...|
T Consensus 11 m~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f 90 (164)
T 2lul_A 11 MNFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPF 90 (164)
T ss_dssp CCSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEE
T ss_pred CCCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeE
Confidence 4578888999888655322 37899999999997775432 334567999999888664332 2345
Q ss_pred EEEeCCCCCeeeecCcHHH---HHHHHHHHHhcc
Q 027012 155 AIIIPSEYDLLMASTRKTE---IVTVLVEATKGA 185 (229)
Q Consensus 155 VIhv~~e~D~ll~s~~ktE---lvt~L~~~~~~~ 185 (229)
.|..+ +.-+.|..+.-.| =|..|.++.+..
T Consensus 91 ~i~t~-~rt~~l~A~s~~e~~~Wi~aL~~~i~~n 123 (164)
T 2lul_A 91 QVVHD-ANTLYIFAPSPQSRDLWVKKLKEEIKNN 123 (164)
T ss_dssp EEECS-SCEEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred EEecC-CcEEEEECCCHHHHHHHHHHHHHHHHHC
Confidence 55544 3567777765555 456666666643
No 53
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=71.51 E-value=20 Score=28.78 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=56.4
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC----------CCeeeecC-cHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE----------YDLLMAST-RKTEIVTV 177 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e----------~D~ll~s~-~ktElvt~ 177 (229)
++++-.|.|+...|.++|+.+-.+....||..|+-.+.-+....+|..-.... .-.+|.|+ .-.+++..
T Consensus 68 ~~~~V~L~VS~~gI~l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~t 147 (175)
T 2ela_A 68 RMTESHLLVTCDCLKLIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDS 147 (175)
T ss_dssp CCEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHH
T ss_pred cCCEEEEEEECCeEEEEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHH
Confidence 56777899999999999998888888899999988887655555777766432 12455665 45667778
Q ss_pred HHHHHhc
Q 027012 178 LVEATKG 184 (229)
Q Consensus 178 L~~~~~~ 184 (229)
|.+++..
T Consensus 148 IgqAF~~ 154 (175)
T 2ela_A 148 VGLAKQI 154 (175)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777763
No 54
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=71.43 E-value=59 Score=29.36 Aligned_cols=92 Identities=14% Similarity=0.287 Sum_probs=60.2
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-----cceeEEEeeccccceEEEeccCC--------cEEEEEe
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-----TDALKRRIALAAVEKMCLSELSD--------NFFAIII 158 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-----~~klKrrIpL~~I~gVSvS~~~D--------~~~VIhv 158 (229)
...+..+.+.++.+ .++.+.|.++|=+..|....++ .|..|.+|||..+.=..+....+ +.|-|+.
T Consensus 332 r~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~ 411 (466)
T 2pz1_A 332 SELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHR 411 (466)
T ss_dssp SCEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEEC
T ss_pred ceeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEe
Confidence 46788888888887 6889999999988888777643 47889999998873333322211 3455555
Q ss_pred CC-CCCeeeecC---cHHHHHHHHHHHHhc
Q 027012 159 PS-EYDLLMAST---RKTEIVTVLVEATKG 184 (229)
Q Consensus 159 ~~-e~D~ll~s~---~ktElvt~L~~~~~~ 184 (229)
+. +.-++|++. .|.+-+..|..+..+
T Consensus 412 ~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 412 GATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp SSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 43 234566554 345556666666553
No 55
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=71.21 E-value=25 Score=25.09 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=55.8
Q ss_pred cEEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-cCCcEEEEEeCCC---------
Q 027012 94 QVLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-LSDNFFAIIIPSE--------- 161 (229)
Q Consensus 94 ~VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-~~D~~~VIhv~~e--------- 161 (229)
.++.+..+.|-... ..-++|.++|++..||-..... .+.+..|+|..++-+.+.. ...+.|.|..++.
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 83 (127)
T 1fgy_A 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACK 83 (127)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEE
T ss_pred CCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccCCCCCceEEEecCCcccccccccc
Confidence 45667777887653 3458899999999998886533 5667789999885444432 2234556665532
Q ss_pred ------------CCeeeecCcHHHHHHHHH
Q 027012 162 ------------YDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 162 ------------~D~ll~s~~ktElvt~L~ 179 (229)
.-+.|.++...|.-.++.
T Consensus 84 ~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~ 113 (127)
T 1fgy_A 84 TEADGRVVEGNHVVYRISAPSPEEKEEWMK 113 (127)
T ss_dssp ECTTSCEEECCCSEEEEECSSHHHHHHHHH
T ss_pred ccCCcceecCCceEEEEECCCHHHHHHHHH
Confidence 256777776666554443
No 56
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=71.16 E-value=0.046 Score=56.23 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=68.6
Q ss_pred hhhhhhccccccccccCCcCcccCccCCCCchHHHHHHhhcCCccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc
Q 027012 50 EDQEPFMGIKVRRKASLHRDYKGDYLDVASHPYLMKILQKQGDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET 129 (229)
Q Consensus 50 ~a~~~f~gkK~Rrr~Sl~R~f~GDYL~~~~~~~~~~l~~k~~~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~ 129 (229)
..+..|+| |..++.|+.-+|.|| .+..++..+++-.+ .++.|+.+..+.|+||.+. +++|+. .+
T Consensus 909 e~~~~~kd-~~~y~~~~~~~f~g~--~l~~~~~~~~~~~~-~~~~i~~~~~~~~~n~~n~-----~~~~~~-------~~ 972 (1052)
T 4anj_A 909 ERTIFFKD-DGNYKTRAEVKFEGD--TLVNRIELKGIDFK-EDGNILGHKLEYNYNSHNV-----YIMADK-------QK 972 (1052)
T ss_dssp EEEEEETT-SCEEEEEEEEEEETT--EEEEEEEEEEESCC-TTSTTTTTCBCSCCCCEEE-----EEEEET-------TT
T ss_pred Hhhhhhcc-cccCccccCccccch--hhccCccccccccc-cccchhhhhhhcccCccce-----eEecch-------hc
Confidence 44668888 789999999999999 45555543333221 3689999999999998544 455552 22
Q ss_pred ceeEEEeeccccceEEEeccCCcEEEEEeC-----CCCCeeeecCcHHHHHH
Q 027012 130 DALKRRIALAAVEKMCLSELSDNFFAIIIP-----SEYDLLMASTRKTEIVT 176 (229)
Q Consensus 130 ~klKrrIpL~~I~gVSvS~~~D~~~VIhv~-----~e~D~ll~s~~ktElvt 176 (229)
-..+--+.+. +++..+...|+.|+. +.+++.+.|.|..|..+
T Consensus 973 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~ 1019 (1052)
T 4anj_A 973 NGIKVNFKIR-----HNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQS 1019 (1052)
T ss_dssp TEEEEEEEEE-----EEBTTSCEEEEEEEEEEEESSSSCCCCCCSEEEEEEE
T ss_pred CcceEEEEec-----cccccccccHHhHhhccCccCCcccccccchhHHHHH
Confidence 3334333333 445555555677773 35888888888544433
No 57
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=70.04 E-value=38 Score=26.75 Aligned_cols=75 Identities=15% Similarity=0.096 Sum_probs=53.1
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCC--CC---CeeeecCc--HHHHHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPS--EY---DLLMASTR--KTEIVTVLVEA 181 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~--e~---D~ll~s~~--ktElvt~L~~~ 181 (229)
++++-.|.|+...|-++|+.+-.+-..-|+..|+-.+.-+....+|..-... .. -.+|.|.. -.+++..|.++
T Consensus 76 k~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~~~~~~~CHvF~c~~~~A~~I~~aIgqA 155 (168)
T 3f0w_A 76 KSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDGTTRRWICHCFLALKDSGERLSHAVGCA 155 (168)
T ss_dssp -CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEETTTTEEEEEEEEESSSCHHHHHHHHHHH
T ss_pred CCcEEEEEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecCCCCcEEEEEEEeccchHHHHHHHHHHH
Confidence 4577778899999999999776666778999998888765555566665532 22 35566643 55677788887
Q ss_pred Hh
Q 027012 182 TK 183 (229)
Q Consensus 182 ~~ 183 (229)
+.
T Consensus 156 F~ 157 (168)
T 3f0w_A 156 FA 157 (168)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 58
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=69.87 E-value=47 Score=32.15 Aligned_cols=72 Identities=14% Similarity=0.218 Sum_probs=52.7
Q ss_pred eeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCC---cEEEEEeCCCCCeeeecCcHHHHHHHHHHHHh
Q 027012 111 KRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSD---NFFAIIIPSEYDLLMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D---~~~VIhv~~e~D~ll~s~~ktElvt~L~~~~~ 183 (229)
.+-+|-|+...|+++++++-.+ -..|+++|..++.+...+ .-|.|......+++|.++...+|...|...+.
T Consensus 493 ~~l~LgVn~~GV~v~d~~~k~l-l~f~~~eI~~is~~~~~~~~~~~ftl~~~~~~~~~F~T~~a~~I~~LI~~yi~ 567 (655)
T 3pvl_A 493 SDVIVAVNWTGVYFVDEQEQVL-LELSFPEIMAVSSSRGTKMMAPSFTLATIKGDEYTFTSSNAEDIRDLVVTFLE 567 (655)
T ss_dssp SEEEEEEETTEEEEECTTCCEE-EEEEGGGEEEEEEECCCSSSCCEEEEEETTSCEEEEECTTHHHHHHHHHHHHH
T ss_pred ccEEEEEcCCceEEEcCCCceE-EEechhHceEEeccCcccccccEEEEEeccCceEEEEcCCHHHHHHHHHHHHH
Confidence 3677889999999999865433 369999999999986433 46677765556799999887666655544433
No 59
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=68.50 E-value=27 Score=26.29 Aligned_cols=81 Identities=7% Similarity=0.138 Sum_probs=51.4
Q ss_pred eeEEEeCCCCceeeeEEEEecCeEEEecC-C---cceeEEEeeccccceEEEeccCC------------c-EEEEEeCCC
Q 027012 99 DKILKFTGSGKMKRRILLITDFAIYLVDP-E---TDALKRRIALAAVEKMCLSELSD------------N-FFAIIIPSE 161 (229)
Q Consensus 99 ~~V~Kinr~gK~~~R~LiITd~aiY~ld~-~---~~klKrrIpL~~I~gVSvS~~~D------------~-~~VIhv~~e 161 (229)
+...|+.++++...|++.+++...++-.. + .-+.+..|+|++|..|-.-..++ . |-||+-...
T Consensus 17 t~l~K~~~~~~~k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~ 96 (131)
T 1mai_A 17 SQLLKVKSSSWRRERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQR 96 (131)
T ss_dssp EEEEEESSSSCEEEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSC
T ss_pred CeEEEECCCCcceeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCC
Confidence 45678887776788999998876555542 1 12357789999999998864222 2 445554322
Q ss_pred CCeeeecCcHHHHHHHHH
Q 027012 162 YDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 162 ~D~ll~s~~ktElvt~L~ 179 (229)
.=+=|.++...|+-.++.
T Consensus 97 k~LdlvA~s~~e~~~Wv~ 114 (131)
T 1mai_A 97 NTLDLIAPSPADAQHWVQ 114 (131)
T ss_dssp CCEEEECSSHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHH
Confidence 334445777777655543
No 60
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=67.73 E-value=36 Score=26.07 Aligned_cols=72 Identities=10% Similarity=0.234 Sum_probs=44.8
Q ss_pred eeeeEEEEecCeEEEecCCc---ceeEEEeeccccceEE-Eec---cCCcEEEEEeCCCCCeeeecCcHHHHHHHHHHHH
Q 027012 110 MKRRILLITDFAIYLVDPET---DALKRRIALAAVEKMC-LSE---LSDNFFAIIIPSEYDLLMASTRKTEIVTVLVEAT 182 (229)
Q Consensus 110 ~~~R~LiITd~aiY~ld~~~---~klKrrIpL~~I~gVS-vS~---~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~~~ 182 (229)
=+.|.++|++..||...... -..+..|+|.....+. +.. ...+.|.|..++ .-|+|+++...|+-.++...-
T Consensus 29 WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~-r~~~l~A~s~~e~~~Wi~ai~ 107 (168)
T 2j59_M 29 WKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSD-CECLFQAEDRDDMLAWIKTIQ 107 (168)
T ss_dssp CEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEEEECSS-CEEEEECSSHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCEEEEEeCC-ceEEEEcCCHHHHHHHHHHHH
Confidence 47999999999998886542 2446668887755432 332 234577777765 578899888887766665443
No 61
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=67.44 E-value=46 Score=29.52 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=56.8
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC-------------------cceeEEEeeccccceEEEeccCCcE
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE-------------------TDALKRRIALAAVEKMCLSELSDNF 153 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~-------------------~~klKrrIpL~~I~gVSvS~~~D~~ 153 (229)
..++..+.+.+...+++.++|.++|=+..|....++ +|..+..|+|+.+.=-.+......|
T Consensus 293 r~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~f 372 (418)
T 3t06_A 293 RKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAF 372 (418)
T ss_dssp SCEEEEEEEEECCBTTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSCSSEE
T ss_pred ceeEEeceEEEEeCCCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceeccccccCceE
Confidence 568888999888878888889888888888777542 2445678898887322233344457
Q ss_pred EEEEeCC---CCCeeeecCcHHHHHHHHHHH
Q 027012 154 FAIIIPS---EYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 154 ~VIhv~~---e~D~ll~s~~ktElvt~L~~~ 181 (229)
++++... +.=+.|.+....|--.++...
T Consensus 373 ~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I 403 (418)
T 3t06_A 373 FIICTSKLGPPQIYELVALTSSDKNTWMELL 403 (418)
T ss_dssp EEEECCSSSTTCEEEEECSSHHHHHHHHHHH
T ss_pred EEEecCCCCCceEEEEEcCCHHHHHHHHHHH
Confidence 7777532 134566666555544444433
No 62
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=66.72 E-value=24 Score=32.98 Aligned_cols=82 Identities=11% Similarity=0.147 Sum_probs=56.6
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHH
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKT 172 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~kt 172 (229)
+--+|... ....+.+.+-+|-|+...|+++++.+..+....|+++|..++.. +++.|.|.+.+ ..+.|.++...
T Consensus 451 G~~~F~v~---~~~~~~~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~--~~~~f~i~~~~-~~l~f~T~qa~ 524 (555)
T 3au4_A 451 GSTLFDVE---CKEGGFPQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAP--LANTYKIVVDE-RELLFETSEVV 524 (555)
T ss_dssp TCEEEEEE---EEESSSCSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEE--ETTEEEEEETT-EEEEEECTTHH
T ss_pred CceEEEEE---ecCCCCCceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCC--CCCEEEEEECC-cEEEEECCCHH
Confidence 44566653 22233345667888999999999876666678999999988752 34556788865 47888887766
Q ss_pred HHHHHHHH
Q 027012 173 EIVTVLVE 180 (229)
Q Consensus 173 Elvt~L~~ 180 (229)
||...|..
T Consensus 525 ~i~~LI~~ 532 (555)
T 3au4_A 525 DVAKLMKA 532 (555)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66544443
No 63
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=66.15 E-value=52 Score=26.71 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=58.1
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC--CCeeeecCc
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE--YDLLMASTR 170 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e--~D~ll~s~~ 170 (229)
+--+|...-. -....+..+..|-|+...|.++++.+-.+-...|+++|..++.+ .+.|.|.+.+. +.+.+.++.
T Consensus 126 G~~~f~v~~~-~~g~~~~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~---~~~f~I~~~~~~~~~~~~~T~q 201 (222)
T 4f7g_A 126 GVSFFLVKEK-MKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDGYYSVQTTE 201 (222)
T ss_dssp TCEEEEEEEE-CTTSSCEEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCEEEEC---SSEEEEECCTTSSSCEEEECSC
T ss_pred CcEEEEEEEe-cCCCCCCCCEEEEEcCCcEEEEcCCCCceeEeccHHHeeeeccC---CCEEEEEECCccceEEEEECCc
Confidence 4456655432 11223467888999999999999987777888999999999854 34567877432 457777777
Q ss_pred HHHHHHHHHHH
Q 027012 171 KTEIVTVLVEA 181 (229)
Q Consensus 171 ktElvt~L~~~ 181 (229)
-.||...|..-
T Consensus 202 ~~~I~~Li~~Y 212 (222)
T 4f7g_A 202 GEQIAQLIAGY 212 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666555443
No 64
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=65.83 E-value=38 Score=25.05 Aligned_cols=91 Identities=9% Similarity=0.184 Sum_probs=59.0
Q ss_pred CccEEEeeeEEEeCC-CCceeeeE-EEEecCeEEEecC-----CcceeEEEeeccccceEEEec--cCCcEEEEEeCCCC
Q 027012 92 DKQVLFADKILKFTG-SGKMKRRI-LLITDFAIYLVDP-----ETDALKRRIALAAVEKMCLSE--LSDNFFAIIIPSEY 162 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr-~gK~~~R~-LiITd~aiY~ld~-----~~~klKrrIpL~~I~gVSvS~--~~D~~~VIhv~~e~ 162 (229)
+..++....+.++++ ..|+.+++ |+|=|..|..-.+ ..|+....+||.+|.-+.+.. .-.|.|-|..++ .
T Consensus 5 gR~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~-~ 83 (113)
T 1zc3_B 5 GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFP-E 83 (113)
T ss_dssp CCCEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEETT-E
T ss_pred CeEEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEEeCC-c
Confidence 356788889999998 45665543 5554445544433 127778889999987666632 234566666654 3
Q ss_pred CeeeecC---cHHHHHHHHHHHHh
Q 027012 163 DLLMAST---RKTEIVTVLVEATK 183 (229)
Q Consensus 163 D~ll~s~---~ktElvt~L~~~~~ 183 (229)
-.++.++ .|.|.+..|.++.+
T Consensus 84 s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 84 SRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHH
Confidence 4667663 57888888887764
No 65
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=64.93 E-value=57 Score=28.29 Aligned_cols=89 Identities=13% Similarity=0.169 Sum_probs=52.2
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC-------------------cceeEEEeeccccceEE-EeccCCc
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE-------------------TDALKRRIALAAVEKMC-LSELSDN 152 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~-------------------~~klKrrIpL~~I~gVS-vS~~~D~ 152 (229)
...++.+.+.+...+++.++|.++|=+..|....++ +|..+..||+..+. |. ++.....
T Consensus 251 R~li~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~~~~~ 329 (368)
T 1xcg_A 251 RKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVL-IRSVATDKRA 329 (368)
T ss_dssp SCEEEEEEEEECCSSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEE-EEECSSCSSE
T ss_pred ceEEeecceEeeecCCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEcccee-eecccCCCce
Confidence 467888888765556777888888877777666432 24456778888763 32 2223334
Q ss_pred EEEEEeCC---CCCeeeecCcHHH---HHHHHHHHH
Q 027012 153 FFAIIIPS---EYDLLMASTRKTE---IVTVLVEAT 182 (229)
Q Consensus 153 ~~VIhv~~---e~D~ll~s~~ktE---lvt~L~~~~ 182 (229)
|++++... +.-+.|.+....| -+..|.++.
T Consensus 330 f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai 365 (368)
T 1xcg_A 330 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAV 365 (368)
T ss_dssp EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHH
Confidence 66776532 2346676655444 444444443
No 66
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=62.39 E-value=43 Score=24.52 Aligned_cols=87 Identities=10% Similarity=0.109 Sum_probs=51.2
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCCc----------ceeEEEeeccccceEEEecc----CCcEEEEE
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPET----------DALKRRIALAAVEKMCLSEL----SDNFFAII 157 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~~----------~klKrrIpL~~I~gVSvS~~----~D~~~VIh 157 (229)
+.+..+....|-.. ...-++|.+||++..||-.+... -..+-.|+|.... |..... ....|-|.
T Consensus 10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~-v~~~~~~~~~k~~~F~I~ 88 (124)
T 2w2x_D 10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYN-VVKAPQGKNQKSFVFILE 88 (124)
T ss_dssp ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEE-EEECTTCBTTBSEEEEEE
T ss_pred hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCE-EEEccCCcCCCCEEEEEE
Confidence 34556666777654 33458999999999998886421 1235668888765 333321 11345565
Q ss_pred eCCC--CCeeeecCcHHHHHHHHHH
Q 027012 158 IPSE--YDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 158 v~~e--~D~ll~s~~ktElvt~L~~ 180 (229)
.++. .=+.|.++...|+-.++..
T Consensus 89 ~~~~~~~~~~~~A~s~ee~~~Wi~a 113 (124)
T 2w2x_D 89 PKQQGDPPVEFATDKVEELFEWFQS 113 (124)
T ss_dssp ECC--CCCEEEEECCCHHHHHHHHH
T ss_pred CCCCCCceEEEEECCHHHHHHHHHH
Confidence 5543 2366778776666655543
No 67
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=61.23 E-value=64 Score=27.82 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=55.0
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC-CCeeeecCcHHHHHHHHHHHHh
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE-YDLLMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e-~D~ll~s~~ktElvt~L~~~~~ 183 (229)
+..+.+|-|+...|+++++++..+-...|+.+|+ .++| .++..|.|.+-+. ..+++.+....||...|.....
T Consensus 240 ~~~~~~LgV~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s-~~~~~f~i~~~~~~~~~~~~t~q~~~i~~li~~~~~ 313 (322)
T 4dxa_B 240 KVIPVYVGVNIKGLHLLNMETKALLISLKYGCFM-WQLG-DTDTCFQIHSMENKMSFIVHTKQAGLVVKLLMKLNG 313 (322)
T ss_dssp -EEEEEEEECSSEEEEEETTTCCEEEEEETTSEE-EEEC-SSTTEEEEEESSSCCEEEEECTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCceEEEcCCCceeeeccccceeE-Eeec-CCCCEEEEEECCCCccEEEEeCcHHHHHHHHHHHHH
Confidence 4567888899999999999877777889999995 6644 5566888887543 3688888887777766665554
No 68
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=60.55 E-value=38 Score=23.30 Aligned_cols=71 Identities=8% Similarity=0.127 Sum_probs=44.1
Q ss_pred eeeeEEEEecCeEEEecCCcc-----eeEEE--eeccccceEEEec---cCCcEEEEEeCCCCCeeeecCcHHHHHHHHH
Q 027012 110 MKRRILLITDFAIYLVDPETD-----ALKRR--IALAAVEKMCLSE---LSDNFFAIIIPSEYDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 110 ~~~R~LiITd~aiY~ld~~~~-----klKrr--IpL~~I~gVSvS~---~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~ 179 (229)
=+.|.++|++..||......- ..+.. |+|... .+.+.+ ...+.|.|..++..-++|+++...|+...+.
T Consensus 23 Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~-~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ 101 (106)
T 1btn_A 23 WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEA-ICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQ 101 (106)
T ss_dssp CEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTC-EEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHH
T ss_pred hhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCC-EEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHH
Confidence 378999999999988865321 11222 444332 122222 2245677776655678899999888887775
Q ss_pred HH
Q 027012 180 EA 181 (229)
Q Consensus 180 ~~ 181 (229)
..
T Consensus 102 ai 103 (106)
T 1btn_A 102 AI 103 (106)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 69
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=57.60 E-value=63 Score=24.88 Aligned_cols=82 Identities=15% Similarity=0.229 Sum_probs=55.6
Q ss_pred CCccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc----ceeEEEeeccccceEEEeccC----CcEEEEEeCCCC
Q 027012 91 GDKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET----DALKRRIALAAVEKMCLSELS----DNFFAIIIPSEY 162 (229)
Q Consensus 91 ~~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~----~klKrrIpL~~I~gVSvS~~~----D~~~VIhv~~e~ 162 (229)
.+|+|.++-.. -+-.++.||+.|..+|... -+.-..+|++.|+.+|+-+-. |..+-|++.+..
T Consensus 30 ~gE~I~~ayk~---------iRD~~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~fDlDaElki~isg~~ 100 (126)
T 3hsa_A 30 DNEELQLAYXM---------VRDLFVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTFDMDAELXLWISGQH 100 (126)
T ss_dssp TTCCEEEEEEC---------SSEEEEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTTSCEEEEEEEETTCS
T ss_pred CCCEEEEEehh---------cCceEEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccccCCceEEEEEcCCc
Confidence 46888887554 3478999999999999642 233567999999999986433 457788886544
Q ss_pred C-eeee---cCcHHHHHHHHHHH
Q 027012 163 D-LLMA---STRKTEIVTVLVEA 181 (229)
Q Consensus 163 D-~ll~---s~~ktElvt~L~~~ 181 (229)
. +-+. .....|+-..|...
T Consensus 101 ~pi~~~f~k~~di~~i~k~La~~ 123 (126)
T 3hsa_A 101 EPLVXELXRGTDVVGIQXTIARY 123 (126)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHH
T ss_pred eEEEEeccCcccHHHHHHHHHHH
Confidence 2 3332 24556666666554
No 70
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=57.45 E-value=49 Score=26.46 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=46.9
Q ss_pred eeEEEEecCeEEEecCCcceeEEEeeccccc-eEEEeccCCcE------EEEEeC----CCC-CeeeecCc---HHHHHH
Q 027012 112 RRILLITDFAIYLVDPETDALKRRIALAAVE-KMCLSELSDNF------FAIIIP----SEY-DLLMASTR---KTEIVT 176 (229)
Q Consensus 112 ~R~LiITd~aiY~ld~~~~klKrrIpL~~I~-gVSvS~~~D~~------~VIhv~----~e~-D~ll~s~~---ktElvt 176 (229)
+-+|-||...|-+.+....-+..|+||.+|. .+|- .|.+ +|+... .++ =.+|+|.. -.|++.
T Consensus 63 dvi~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~Y---dDg~g~g~~vla~KT~~~~~~~~~~hv~Qc~s~~~A~~iC~ 139 (154)
T 4dx8_A 63 EFIMGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCY---DDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICK 139 (154)
T ss_dssp CEEEEEETTEEEEEETTSCCEEEEEEGGGEEEEEEE---ECCSSSCCEEEEEEEECTTSCCEEEEEEEESSHHHHHHHHH
T ss_pred eEEEEEeccCcEEEeccCcccccchhHHHhhhheee---ccccccccEEEEEEecCCCCceEEEEEEEcCCHHHHHHHHH
Confidence 3456678888888877778888999999996 4443 6666 677753 223 34556744 467777
Q ss_pred HHHHHHh
Q 027012 177 VLVEATK 183 (229)
Q Consensus 177 ~L~~~~~ 183 (229)
+|..++.
T Consensus 140 ~l~~~f~ 146 (154)
T 4dx8_A 140 VLSTAFD 146 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777765
No 71
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=54.80 E-value=1.1e+02 Score=26.77 Aligned_cols=83 Identities=20% Similarity=0.267 Sum_probs=58.1
Q ss_pred cEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCC--CCCeeeecCcH
Q 027012 94 QVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPS--EYDLLMASTRK 171 (229)
Q Consensus 94 ~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~--e~D~ll~s~~k 171 (229)
--+|.+. .+....+++.+..|-|+...|+++++++..+-...|+++|..++.+ .+.|.|.+.+ ...+.+.++.-
T Consensus 281 ~~~f~vk-~~~~g~~~~~~~~LgI~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~---~~~f~I~~~~~~~~~~~~~T~~~ 356 (371)
T 3ivf_A 281 VSFFLVK-EKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDGYYSVQTTEG 356 (371)
T ss_dssp CEEEEEE-EECTTSSCEEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEE---TTEEEEECGGGSSSCEEEECSCH
T ss_pred cEEEEEE-EeccCCCCCccEEEEEcCCcEEEEcCCCCceEEeeehhheeeeecC---CCEEEEEECCccCcEEEEECChH
Confidence 3455443 2222234566788999999999999987777888999999999876 3566777742 24677888777
Q ss_pred HHHHHHHHH
Q 027012 172 TEIVTVLVE 180 (229)
Q Consensus 172 tElvt~L~~ 180 (229)
.||...|..
T Consensus 357 ~~I~~Li~~ 365 (371)
T 3ivf_A 357 EQIAQLIAG 365 (371)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666654443
No 72
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=53.66 E-value=1.1e+02 Score=29.06 Aligned_cols=82 Identities=10% Similarity=0.135 Sum_probs=55.2
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCC--CCCeeeecC
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPS--EYDLLMAST 169 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~--e~D~ll~s~ 169 (229)
+--+|.+. +..| .+.+|-|+...|+++++.. ......+|+++|..+|.+. +.|.|.+.+ ..++.|.++
T Consensus 202 G~~~F~vk----d~~g--~~l~LGV~~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~---k~F~I~~~~~~~~~l~F~t~ 272 (575)
T 2i1j_A 202 GVNYFEIR----NKKN--TELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFND---RKFIIKPIDKKAPDFVFFAP 272 (575)
T ss_dssp TCEEEEEE----CTTC--CEEEEEECSSEEEEEETTCSSSCSEEEEGGGEEEEEEET---TEEEEEESCTTSCCEEEECS
T ss_pred CCEEEEEE----ecCC--CEEEEEEcCCeeEEEeCCCCcccceEecHHHhhcccCCC---CeEEEEEccCCcceeEEEeC
Confidence 34466653 3444 6888889999999998754 2445679999999998764 456777743 358888887
Q ss_pred cH--HHHHHHHHHHHh
Q 027012 170 RK--TEIVTVLVEATK 183 (229)
Q Consensus 170 ~k--tElvt~L~~~~~ 183 (229)
.. ...+..||..|.
T Consensus 273 ~~~~ak~i~~lc~~~H 288 (575)
T 2i1j_A 273 RVRVNKRILALCMGNH 288 (575)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHH
Confidence 63 344555554443
No 73
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=52.63 E-value=51 Score=22.34 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=48.3
Q ss_pred eeeEEEeCCCCc-eeeeEEEEecCeEEEecCCc---ceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCcHHH
Q 027012 98 ADKILKFTGSGK-MKRRILLITDFAIYLVDPET---DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTRKTE 173 (229)
Q Consensus 98 S~~V~Kinr~gK-~~~R~LiITd~aiY~ld~~~---~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ktE 173 (229)
+....|-....| =++|.++|++..|+-..... ....-.|+|... .+..++.....|.|+.++ .-+.|.++...|
T Consensus 4 ~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~-~~~~~~~~~~~F~i~~~~-r~~~l~A~s~~e 81 (94)
T 2rsg_A 4 CGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKA-VITPHDFDECRFDISVND-SVWYLRAQDPDH 81 (94)
T ss_dssp EEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTC-EEEECSSCSSEEEEEETT-EEEEEECCSSCC
T ss_pred EEEEEEeCCCCCCceEEEEEEECCEEEEEEecccccccceeeEeccee-eeecCcccceeEEEEeCC-eEEEEECCCHHH
Confidence 345566544322 47899999999997764322 344566787765 455566666677888764 467776654444
Q ss_pred HHHH
Q 027012 174 IVTV 177 (229)
Q Consensus 174 lvt~ 177 (229)
.-..
T Consensus 82 ~~~W 85 (94)
T 2rsg_A 82 RQQW 85 (94)
T ss_dssp THHH
T ss_pred HHHH
Confidence 4333
No 74
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.60 E-value=59 Score=23.05 Aligned_cols=84 Identities=10% Similarity=0.088 Sum_probs=53.8
Q ss_pred ccEEEeeeEEEeCCC--CceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCCCCeeeecCc
Q 027012 93 KQVLFADKILKFTGS--GKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSEYDLLMASTR 170 (229)
Q Consensus 93 e~VlFS~~V~Kinr~--gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll~s~~ 170 (229)
..++.+....|-... ..-++|.++|++..|+-.....-+....|.+.... |...+.....|.|..+ +.-+.|.++.
T Consensus 8 ~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~i~l~~~~-v~~~~~~~~~F~I~~~-~r~~~l~a~s 85 (114)
T 2da0_A 8 YGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTCQ-VKPNAEDKKSFDLISH-NRTYHFQAED 85 (114)
T ss_dssp CCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCCSCCEEEETTTSE-EEECSSSSSCEEEEET-TEEEEEECSS
T ss_pred CCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCCCCCCEEEeeeeE-EEECCCCCCEEEEEcC-CcEEEEEcCC
Confidence 467788888888763 34589999999999988765443333444443321 4444444455666654 4578888877
Q ss_pred HHHHHHHH
Q 027012 171 KTEIVTVL 178 (229)
Q Consensus 171 ktElvt~L 178 (229)
..|+-.++
T Consensus 86 ~~e~~~Wi 93 (114)
T 2da0_A 86 EQDYVAWI 93 (114)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76664443
No 75
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=51.83 E-value=54 Score=23.50 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=43.4
Q ss_pred eeeEEEEecCeEEEecCCcce-----eEE--EeeccccceEEEe---ccCCcEEEEEeCCCCCeeeecCcHHHHHHHHHH
Q 027012 111 KRRILLITDFAIYLVDPETDA-----LKR--RIALAAVEKMCLS---ELSDNFFAIIIPSEYDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~~k-----lKr--rIpL~~I~gVSvS---~~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~ 180 (229)
++|.++|.+..||......-. .+- .|+|... .+.+. ....+.|.|..++..-++|+++...|+-.+|..
T Consensus 33 k~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~-~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~a 111 (123)
T 1wjm_A 33 QNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARA-QGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRV 111 (123)
T ss_dssp EEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTC-EEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHH
T ss_pred cEEEEEEECCEEEEEEcccccccCcccCCCceEEccCc-EEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHH
Confidence 689999999999888653211 112 2444321 12222 224567778777656899999888887666654
Q ss_pred H
Q 027012 181 A 181 (229)
Q Consensus 181 ~ 181 (229)
.
T Consensus 112 i 112 (123)
T 1wjm_A 112 V 112 (123)
T ss_dssp H
T ss_pred H
Confidence 4
No 76
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=50.25 E-value=1.3e+02 Score=26.29 Aligned_cols=87 Identities=20% Similarity=0.216 Sum_probs=58.1
Q ss_pred EEEeeeEEEeCCC-CceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEec-cCCcEEEEEeCC-----------
Q 027012 95 VLFADKILKFTGS-GKMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSE-LSDNFFAIIIPS----------- 160 (229)
Q Consensus 95 VlFS~~V~Kinr~-gK~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~-~~D~~~VIhv~~----------- 160 (229)
+..+..+.|-... ..-++|.++|++..||-..... .+.+-.|+|..++-..+.. .....|.|..++
T Consensus 213 ~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~ 292 (347)
T 2r09_A 213 PDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKT 292 (347)
T ss_dssp CCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEE
T ss_pred cccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccc
Confidence 4677888887653 3457899999999998886543 4567789999885333322 233456676653
Q ss_pred ----------CCCeeeecCcHHHHHHHHHHH
Q 027012 161 ----------EYDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 161 ----------e~D~ll~s~~ktElvt~L~~~ 181 (229)
..-+.|+++...|.-.++...
T Consensus 293 ~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI 323 (347)
T 2r09_A 293 EADGRVVEGNHVVYRISAPSPEEKEEWMKSI 323 (347)
T ss_dssp CTTSCEEECCCSCEEEECSSHHHHHHHHHHH
T ss_pred cccccccccCceEEEEECCCHHHHHHHHHHH
Confidence 246788888777776655544
No 77
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=48.17 E-value=99 Score=26.08 Aligned_cols=70 Identities=10% Similarity=0.124 Sum_probs=45.2
Q ss_pred eeeEEEEecCeEEEecCC-------cceeEEEeeccccceEEEec--cCCcEEEEEeCCCCCeeeecCcHHHHHHHHHH
Q 027012 111 KRRILLITDFAIYLVDPE-------TDALKRRIALAAVEKMCLSE--LSDNFFAIIIPSEYDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~-------~~klKrrIpL~~I~gVSvS~--~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~~ 180 (229)
+.|.++|++..||..... ....+..|+|..-.-..+.. ...+.|.|..++..-|+|+++.-.|+-.++..
T Consensus 40 krRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~a 118 (263)
T 3a8p_A 40 KQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTA 118 (263)
T ss_dssp EEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHH
T ss_pred eEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHH
Confidence 689999999999888752 23445668886332111211 23467777776666889998887777555443
No 78
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=47.25 E-value=1.1e+02 Score=25.25 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=53.7
Q ss_pred EEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC-cceeEEEeeccccceEEEeccC----------CcEEEEEeCCC--
Q 027012 96 LFADKILKFTG-SGKMKRRILLITDFAIYLVDPE-TDALKRRIALAAVEKMCLSELS----------DNFFAIIIPSE-- 161 (229)
Q Consensus 96 lFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~-~~klKrrIpL~~I~gVSvS~~~----------D~~~VIhv~~e-- 161 (229)
-.+....|-.. ...=++|.++|.+..||-.... ..+.+..|+|..+..+.+.... ...|.|..++.
T Consensus 169 ~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~ 248 (291)
T 3tca_A 169 ELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQK 248 (291)
T ss_dssp CCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCS
T ss_pred ceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCC
Confidence 34566676655 3456899999999999888543 2344556777777665553322 23455555432
Q ss_pred ---CCeeeecCcHHHHHHHHHH
Q 027012 162 ---YDLLMASTRKTEIVTVLVE 180 (229)
Q Consensus 162 ---~D~ll~s~~ktElvt~L~~ 180 (229)
.-+.|+++.-.|...++..
T Consensus 249 ~~~~~~~l~A~s~~e~~~Wi~a 270 (291)
T 3tca_A 249 ESQYIKYLCCDDARTLSQWVMG 270 (291)
T ss_dssp CCTTSEEEECSSHHHHHHHHHH
T ss_pred CCceEEEEECCCHHHHHHHHHH
Confidence 3477888887777666543
No 79
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=44.92 E-value=80 Score=23.67 Aligned_cols=71 Identities=13% Similarity=0.146 Sum_probs=49.2
Q ss_pred cEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC------cceeEEEeeccccceEEEecc-CCcE-EEEEeCCCCCee
Q 027012 94 QVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE------TDALKRRIALAAVEKMCLSEL-SDNF-FAIIIPSEYDLL 165 (229)
Q Consensus 94 ~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~------~~klKrrIpL~~I~gVSvS~~-~D~~-~VIhv~~e~D~l 165 (229)
+++.-+...-....+|...|.+.|=+++|..-++. .|..|..|.++++ +|+-+.. .|.. |.|-.+...+..
T Consensus 9 ~Ll~q~~f~V~~~~~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~-~lte~~~~~d~~kFeiw~~~~~~~~ 87 (119)
T 1fho_A 9 RIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKY-NIRQHTTDEDTIVLQPQEPGLPSFR 87 (119)
T ss_dssp CSSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSC-EEEEECTTCCEEEEECCSTTCCCBC
T ss_pred CccccCceEEEeCCCCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeecee-EEEecCCCCCCcEEEEccCCCCceE
Confidence 33333443333333789999999999999887653 4888999999999 8888877 7764 666555544433
No 80
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=44.56 E-value=1.6e+02 Score=25.80 Aligned_cols=90 Identities=10% Similarity=0.052 Sum_probs=51.7
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecCC--cceeEEEeeccccceEEEeccC--------CcEEEEEeCCC
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDPE--TDALKRRIALAAVEKMCLSELS--------DNFFAIIIPSE 161 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~~--~~klKrrIpL~~I~gVSvS~~~--------D~~~VIhv~~e 161 (229)
+..+..+.+..... +++.++|.++|-+..|....++ +|.+|..|||..+. |.-.+.. ..|.+++..++
T Consensus 232 grli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~-v~~~~~~~~~~~~~~~~F~i~~~~~~ 310 (406)
T 2vrw_B 232 GRPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGDSYDLKASVNLHSFQ-VRDDSSGERDNKKWSHMFLLIEDQGA 310 (406)
T ss_dssp CSEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETTEEEEEEEEETTTEE-EEC--------CTTCEEEEEEETTCS
T ss_pred CcccccccEEEEecCCCccceEEEEecCCEEEEEEecCCceEEEEEeccccee-eeecCCCCccCCccceeeEEEecCCC
Confidence 34566666666543 3455778888877777777643 58889999998763 2222211 23555554334
Q ss_pred CCeeeecCcH---HHHHHHHHHHHh
Q 027012 162 YDLLMASTRK---TEIVTVLVEATK 183 (229)
Q Consensus 162 ~D~ll~s~~k---tElvt~L~~~~~ 183 (229)
.-+.|.+... .+-+..|..+..
T Consensus 311 ~~~~l~a~s~~ek~~W~~~i~~ai~ 335 (406)
T 2vrw_B 311 QGYELFFKTRELKKKWMEQFEMAIS 335 (406)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCHHHHHHHHHHHHHHHh
Confidence 4577766544 444445555443
No 81
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=44.23 E-value=2e+02 Score=26.79 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=52.5
Q ss_pred ccEEEeeeEEEeCC-CCceeeeEEEEecCeEEEecC--CcceeEEEeeccccceEEEeccC--------CcEEEEEeCCC
Q 027012 93 KQVLFADKILKFTG-SGKMKRRILLITDFAIYLVDP--ETDALKRRIALAAVEKMCLSELS--------DNFFAIIIPSE 161 (229)
Q Consensus 93 e~VlFS~~V~Kinr-~gK~~~R~LiITd~aiY~ld~--~~~klKrrIpL~~I~gVSvS~~~--------D~~~VIhv~~e 161 (229)
++++....+.+... +++.++|.++|=+..|....+ .+|.++..|||+.+ .|.-.+.. ..|.+++..+.
T Consensus 404 grll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~-~v~~~~~~~~~~~~~~~~f~i~~~~~~ 482 (587)
T 3ky9_A 404 GRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGDSYDLKDFVNLHSF-QVRDDSSGDRDNKKWSHMFLLIEDQGA 482 (587)
T ss_dssp CCEEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGE-EEEEC-----CCCTTCEEEEEEETTC-
T ss_pred CceEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCCEEEeeeeechhhc-eeeecCCCCcccccccceeEEEEcCCC
Confidence 34566666666543 567788888888888877764 35889999999987 33332222 23655554322
Q ss_pred CCeeeecCc---HHHHHHHHHHHHh
Q 027012 162 YDLLMASTR---KTEIVTVLVEATK 183 (229)
Q Consensus 162 ~D~ll~s~~---ktElvt~L~~~~~ 183 (229)
.-+.|.+.. |.+-+..|.++..
T Consensus 483 ~~~~L~A~S~eeK~~Wi~~I~~ai~ 507 (587)
T 3ky9_A 483 QGYELFFKTRELKKKWMEQFEMAIS 507 (587)
T ss_dssp --CEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 456665544 4445555555544
No 82
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=43.45 E-value=1.6e+02 Score=25.37 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=54.3
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc--ceeEE-----------------EeeccccceEEEeccCCcE
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET--DALKR-----------------RIALAAVEKMCLSELSDNF 153 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~--~klKr-----------------rIpL~~I~gVSvS~~~D~~ 153 (229)
...+..+.+......++.++|.++|=+..|....++. |.++. -|||..+.--.+......+
T Consensus 257 r~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~~~~~ 336 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAF 336 (377)
T ss_dssp SCEEEEEEEEEESSSSCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTCTTEE
T ss_pred ceEEEECCcEEEecCCCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhcccccccccee
Confidence 4678888887777778888998888887777776432 33332 3676665322334444468
Q ss_pred EEEEeCCC--CCeeeecCcHHHHHHHHHHH
Q 027012 154 FAIIIPSE--YDLLMASTRKTEIVTVLVEA 181 (229)
Q Consensus 154 ~VIhv~~e--~D~ll~s~~ktElvt~L~~~ 181 (229)
++|+.... .-+.|.+....|=-.++...
T Consensus 337 ~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I 366 (377)
T 3p6a_A 337 YVLFTWDQEAQIYELVAQTVSERKNWCALI 366 (377)
T ss_dssp EEEETTCTTCCEEEEECSSHHHHHHHHHHH
T ss_pred EEEecCCCCCeeEEEecCCHHHHHHHHHHH
Confidence 88876322 23456665555544444443
No 83
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=41.47 E-value=1.6e+02 Score=25.53 Aligned_cols=90 Identities=11% Similarity=0.147 Sum_probs=51.9
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc-------------------ceeEEEeeccccceEE-EeccCCc
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET-------------------DALKRRIALAAVEKMC-LSELSDN 152 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~-------------------~klKrrIpL~~I~gVS-vS~~~D~ 152 (229)
.++++.+.+.....+++.++|.++|-+..|....++. +.++..|+|+.+. |. ++.....
T Consensus 255 R~li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~-v~~~~~d~~~ 333 (385)
T 1txd_A 255 RKMIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVL-VRQVATDNKA 333 (385)
T ss_dssp SCEEEEEEEEEESSSSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEE-EEECCC-CCE
T ss_pred ceEEEECcEEEEcCCCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccc-ccccccCCce
Confidence 4677888887655567788888888777777665421 2345668877652 22 2222335
Q ss_pred EEEEEeCC--CCCeeeecCc---HHHHHHHHHHHHh
Q 027012 153 FFAIIIPS--EYDLLMASTR---KTEIVTVLVEATK 183 (229)
Q Consensus 153 ~~VIhv~~--e~D~ll~s~~---ktElvt~L~~~~~ 183 (229)
+++|.... +.-+.|.+.. |.+-+..|.++..
T Consensus 334 ~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~ 369 (385)
T 1txd_A 334 LFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA 369 (385)
T ss_dssp EEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 77777642 2345566544 3444445555444
No 84
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=40.28 E-value=60 Score=23.38 Aligned_cols=71 Identities=8% Similarity=0.051 Sum_probs=43.3
Q ss_pred eeeEEEEecCeEEEecCCc-cee--------EEEeeccccceEEEec--cCCcEEEEEeCCCCCeeeecCcHHHHHHHHH
Q 027012 111 KRRILLITDFAIYLVDPET-DAL--------KRRIALAAVEKMCLSE--LSDNFFAIIIPSEYDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~-~kl--------KrrIpL~~I~gVSvS~--~~D~~~VIhv~~e~D~ll~s~~ktElvt~L~ 179 (229)
++|.++|.+..||...... ... ...|+|....--..+. ...+.|-|..++..-++|+++...|+..+|.
T Consensus 33 k~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ 112 (122)
T 1dro_A 33 DKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVT 112 (122)
T ss_dssp EEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHH
T ss_pred cEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHH
Confidence 6889999999888776432 221 1235554421111111 2346777776555678999988888777665
Q ss_pred HH
Q 027012 180 EA 181 (229)
Q Consensus 180 ~~ 181 (229)
..
T Consensus 113 ai 114 (122)
T 1dro_A 113 SL 114 (122)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 85
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=39.58 E-value=1.2e+02 Score=23.04 Aligned_cols=88 Identities=9% Similarity=0.177 Sum_probs=53.8
Q ss_pred ccEEEeeeEEEeCCCC--ceeeeEEEEecCeEEEec-----CCcceeEEEeeccccceEEE-eccCC-----cEEEEEeC
Q 027012 93 KQVLFADKILKFTGSG--KMKRRILLITDFAIYLVD-----PETDALKRRIALAAVEKMCL-SELSD-----NFFAIIIP 159 (229)
Q Consensus 93 e~VlFS~~V~Kinr~g--K~~~R~LiITd~aiY~ld-----~~~~klKrrIpL~~I~gVSv-S~~~D-----~~~VIhv~ 159 (229)
..+.++....|-.+.+ .=++|.+||++..||-.. ...-...--|+|... .|.. .+..| .+|-|..+
T Consensus 6 ~n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~-tV~~~~~~~~~~~~k~~F~~v~~ 84 (126)
T 1wi1_A 6 SGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGY-TVDYTDPQPGLEGGRAFFNAVKE 84 (126)
T ss_dssp CCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSC-EEEECCCCSSCCSCSSEEEEECS
T ss_pred CCCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCc-EEEEecCCcccccCceEEEEecC
Confidence 4577888999987744 337899999999887774 444455666777763 2221 13332 35533335
Q ss_pred CCCCeeeecCcHHHHHHHHHHHH
Q 027012 160 SEYDLLMASTRKTEIVTVLVEAT 182 (229)
Q Consensus 160 ~e~D~ll~s~~ktElvt~L~~~~ 182 (229)
++. ++|+++.-.|.-.++....
T Consensus 85 ~~t-y~~~Adseee~~~WikAi~ 106 (126)
T 1wi1_A 85 GDT-VIFASDDEQDRILWVQAMY 106 (126)
T ss_dssp SCE-EEEECSSHHHHHHHHHHHH
T ss_pred Cce-EEEEcCCHHHHHHHHHHHH
Confidence 443 7778776666554444433
No 86
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=39.34 E-value=2.1e+02 Score=26.55 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=52.4
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCC--cceeEE-----------------EeeccccceEEEeccCCcE
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPE--TDALKR-----------------RIALAAVEKMCLSELSDNF 153 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~--~~klKr-----------------rIpL~~I~gVSvS~~~D~~ 153 (229)
.+++....+.+...+++.++|.++|=+..|.....+ +|.++. .|||..+.=-.+......|
T Consensus 410 R~LI~eG~l~~~~~~~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d~~~f 489 (536)
T 3odw_A 410 KKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAF 489 (536)
T ss_dssp SCEEEEEEEEEESCC---CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTCTTEE
T ss_pred ceeeeecceEEEecCCCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccccCCce
Confidence 457888888877777888888888888777777643 233332 3777776222233334457
Q ss_pred EEEEeC--CCCCeeeecCcHHHH---HHHHHHHHh
Q 027012 154 FAIIIP--SEYDLLMASTRKTEI---VTVLVEATK 183 (229)
Q Consensus 154 ~VIhv~--~e~D~ll~s~~ktEl---vt~L~~~~~ 183 (229)
++|... +..-|.|.+....|- +..|.++..
T Consensus 490 fli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~ 524 (536)
T 3odw_A 490 YVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 524 (536)
T ss_dssp EEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHH
Confidence 777752 223466666555554 444445444
No 87
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=36.52 E-value=1.2e+02 Score=22.01 Aligned_cols=71 Identities=7% Similarity=0.079 Sum_probs=46.9
Q ss_pred eeeEEEEecCeEEEecCCc-c------------eeEEEeeccccceEEEe--cc--CCcEEEEEeCCCCCeeeecCcHHH
Q 027012 111 KRRILLITDFAIYLVDPET-D------------ALKRRIALAAVEKMCLS--EL--SDNFFAIIIPSEYDLLMASTRKTE 173 (229)
Q Consensus 111 ~~R~LiITd~aiY~ld~~~-~------------klKrrIpL~~I~gVSvS--~~--~D~~~VIhv~~e~D~ll~s~~ktE 173 (229)
+.|.++|+...||.....+ . .....|+|..- .+... .. ..+.|-|..++...++|+++...|
T Consensus 32 ~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a-~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e 110 (124)
T 3pp2_A 32 SASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGA-TLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAI 110 (124)
T ss_dssp EEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTC-EEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHH
T ss_pred eEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCC-EEEecccccCCCceEEEEECCCCCEEEEECCCHHH
Confidence 5788999999998885422 2 23455666542 22222 12 356777777665689999999999
Q ss_pred HHHHHHHHH
Q 027012 174 IVTVLVEAT 182 (229)
Q Consensus 174 lvt~L~~~~ 182 (229)
+..++....
T Consensus 111 ~~~Wi~aI~ 119 (124)
T 3pp2_A 111 ISTWHKAIA 119 (124)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887776543
No 88
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=36.51 E-value=1.6e+02 Score=23.26 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=51.6
Q ss_pred ceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEeCCC-------------------------CC
Q 027012 109 KMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIIIPSE-------------------------YD 163 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e-------------------------~D 163 (229)
+.++-.|.|+...|-++++.+..+...-||..|+-++-. .++|+.-.... .-
T Consensus 62 ~~~~V~L~IS~~gikv~d~~t~~il~~~~l~~ISf~aD~---~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~C 138 (172)
T 1aqc_A 62 PMTEVDLFILTQRIKVLNADTQETMMDHPLRTISYIADI---GNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMIC 138 (172)
T ss_dssp --CEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEEE---TTEEEEEECCC----------------------CEEEE
T ss_pred CCcEEEEEEECCeEEEEeCCCCceEeccccceEEEEeeC---CcEEEEEecCCCccccccccccccccccccCCCCcEEE
Confidence 467788999999999999988888888899988777522 34666665431 12
Q ss_pred eeeecCcHHHHHHHHHHHHhc
Q 027012 164 LLMASTRKTEIVTVLVEATKG 184 (229)
Q Consensus 164 ~ll~s~~ktElvt~L~~~~~~ 184 (229)
++|.|..-.+++..|.+++..
T Consensus 139 HVF~s~~A~~I~~tIGqAF~~ 159 (172)
T 1aqc_A 139 HVFESEDAQLIAQSIGQAFSV 159 (172)
T ss_dssp EEEECTTHHHHHHHHHHHHHH
T ss_pred EEEECccHHHHHHHHHHHHHH
Confidence 566676666677778777763
No 89
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=34.27 E-value=2.5e+02 Score=24.93 Aligned_cols=90 Identities=12% Similarity=0.144 Sum_probs=58.7
Q ss_pred ccEEEeeeEEEeCCCC--ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceE-EEe---ccC------CcEEEEEeC
Q 027012 93 KQVLFADKILKFTGSG--KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKM-CLS---ELS------DNFFAIIIP 159 (229)
Q Consensus 93 e~VlFS~~V~Kinr~g--K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gV-SvS---~~~------D~~~VIhv~ 159 (229)
..++-+....|-.... .-++|.++|++..|+-.+... ...+-.|+|..+..+ ++. +.. ...|.|..+
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~ 346 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTP 346 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECS
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeC
Confidence 4567788888876543 348999999999998776533 456778999776543 222 111 245666666
Q ss_pred CCCCeeeecCcHHHHHH---HHHHHHh
Q 027012 160 SEYDLLMASTRKTEIVT---VLVEATK 183 (229)
Q Consensus 160 ~e~D~ll~s~~ktElvt---~L~~~~~ 183 (229)
+ .-|.|+++...|.-. .|..+..
T Consensus 347 ~-rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 347 D-RKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp S-CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred C-eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 4 688888877666554 4444443
No 90
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=33.91 E-value=63 Score=26.75 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=44.8
Q ss_pred CccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCc----ceeEEEeecc--ccceEEEecc----CCcEEEEEeCC
Q 027012 92 DKQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPET----DALKRRIALA--AVEKMCLSEL----SDNFFAIIIPS 160 (229)
Q Consensus 92 ~e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~----~klKrrIpL~--~I~gVSvS~~----~D~~~VIhv~~ 160 (229)
+|+|.|+-.. .+-.++.||+.|..+|.+. -+.-.++|++ .|+.+|+-+- .|..+-|.+.+
T Consensus 27 gE~I~~ayk~---------irD~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtfDlDaElki~i~~ 96 (193)
T 3b77_A 27 GEKIYFLIKS---------KTDEYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTVDLDVEIKFEIGG 96 (193)
T ss_dssp TCCEEEEEEC---------SSEEEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSSCCEEEEEEEETT
T ss_pred CCEEeeeeee---------cceEEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEecceeccCccEEEEEcC
Confidence 5888877554 3448999999999999643 2335669999 9999998663 35677888865
No 91
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=33.87 E-value=2.4e+02 Score=24.78 Aligned_cols=88 Identities=19% Similarity=0.253 Sum_probs=48.3
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecC---CcceeEEEeeccccceEEEeccC--CcEEEEEeCCCCCeeee
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDP---ETDALKRRIALAAVEKMCLSELS--DNFFAIIIPSEYDLLMA 167 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~---~~~klKrrIpL~~I~gVSvS~~~--D~~~VIhv~~e~D~ll~ 167 (229)
...+....+.++.+. +.++|.++|=+..|....+ .+|+++..|||..+ .|.-+... .+.|.|+-+. .-++|.
T Consensus 242 r~li~~g~l~~~~~~-~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l-~v~~~~~~~~~~~f~i~~~~-~~~~l~ 318 (434)
T 3mpx_A 242 REFLKEGTLMKVTGK-NRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANM-KVSRPVMEKVPYALKIETSE-SCLMLS 318 (434)
T ss_dssp CCEEECCEEEEEETT-EEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC------CCCCCTTSCSEEEEECSS-CEEEEE
T ss_pred cceEecceEEEEeCC-CceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCc-EEEecCCCCCCeeEEEecCC-eEEEEe
Confidence 346777777777654 4566777776667766654 35889999999887 33222211 2345555443 357777
Q ss_pred cCcHHH---HHHHHHHHHh
Q 027012 168 STRKTE---IVTVLVEATK 183 (229)
Q Consensus 168 s~~ktE---lvt~L~~~~~ 183 (229)
+....| -+..|.++..
T Consensus 319 a~s~~ek~~W~~~i~~ai~ 337 (434)
T 3mpx_A 319 ASSCAERDEWYGCLSRALP 337 (434)
T ss_dssp CSSHHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 655444 4444444443
No 92
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=33.76 E-value=1.2e+02 Score=25.42 Aligned_cols=43 Identities=26% Similarity=0.298 Sum_probs=31.2
Q ss_pred eeEEEEecC--eEEEecCCcceeEEEeecc---ccceEEEeccCCcEEEEE
Q 027012 112 RRILLITDF--AIYLVDPETDALKRRIALA---AVEKMCLSELSDNFFAII 157 (229)
Q Consensus 112 ~R~LiITd~--aiY~ld~~~~klKrrIpL~---~I~gVSvS~~~D~~~VIh 157 (229)
.+..+++|. .||.||.. .++.+++|+. +.+||++. .++.++|-
T Consensus 39 ~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~--~~g~~~vs 86 (255)
T 3qqz_A 39 NTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI--GDNQFVIS 86 (255)
T ss_dssp TEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC--STTEEEEE
T ss_pred CEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe--CCCEEEEE
Confidence 345555654 78999986 8899999985 89999875 45555553
No 93
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=33.50 E-value=74 Score=26.84 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=31.1
Q ss_pred eeEEEEe--cCeEEEecCCcceeEEEeeccccceEEEeccCCcE
Q 027012 112 RRILLIT--DFAIYLVDPETDALKRRIALAAVEKMCLSELSDNF 153 (229)
Q Consensus 112 ~R~LiIT--d~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~ 153 (229)
.++.++| +..++++|+.++++..+||... .|..+++....+
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L 117 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALTSDDSHL 117 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEEECSSCE
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEeeCCCEE
Confidence 5677777 7788999988999999999864 677776554443
No 94
>2gj2_A WSV230, VP9; ferredoxin fold, metal binding protein; 2.35A {Shrimp white spot syndrome virus} PDB: 2gji_A 2zug_A
Probab=33.28 E-value=53 Score=23.56 Aligned_cols=31 Identities=16% Similarity=0.344 Sum_probs=25.8
Q ss_pred eeccccceEEEeccCCcEEEEEeCCCCCeee
Q 027012 136 IALAAVEKMCLSELSDNFFAIIIPSEYDLLM 166 (229)
Q Consensus 136 IpL~~I~gVSvS~~~D~~~VIhv~~e~D~ll 166 (229)
..+..|++|.-|.+.|+.|++|+++..-+.|
T Consensus 28 ~tF~~vesvRkSEl~d~~~iV~LK~~e~l~~ 58 (85)
T 2gj2_A 28 KTFDTVEAVRKSDLDDRVYMVCLKQGSTFVL 58 (85)
T ss_dssp TTSTTEEEEEECSSCTTEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHhhcccceEEEEEccCCEEEE
Confidence 3567789999999999999999987655555
No 95
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=33.02 E-value=2.4e+02 Score=24.31 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=47.1
Q ss_pred ccEEEeeeEEEeC--CCC----------ceeeeEEEEecCeEEEecCC-----------cceeEEEeeccccceEEEecc
Q 027012 93 KQVLFADKILKFT--GSG----------KMKRRILLITDFAIYLVDPE-----------TDALKRRIALAAVEKMCLSEL 149 (229)
Q Consensus 93 e~VlFS~~V~Kin--r~g----------K~~~R~LiITd~aiY~ld~~-----------~~klKrrIpL~~I~gVSvS~~ 149 (229)
++++..+.+..+. +.| +.++|.++|=+..|....++ .|.+|..||++++ .|+=+..
T Consensus 208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~-~v~e~~~ 286 (353)
T 1kz7_A 208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAV-GITENVK 286 (353)
T ss_dssp CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGE-EEECCBT
T ss_pred hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccc-eeeEcCC
Confidence 3567766665442 233 56788888877777766542 4778999999887 3332222
Q ss_pred -CCcEEEEEeCCC-CCeeeecCcHHH
Q 027012 150 -SDNFFAIIIPSE-YDLLMASTRKTE 173 (229)
Q Consensus 150 -~D~~~VIhv~~e-~D~ll~s~~ktE 173 (229)
..+-|.|...+. .-++|.+....|
T Consensus 287 ~~~~~F~i~~~~~~~~~~l~a~s~~e 312 (353)
T 1kz7_A 287 GDTKKFEIWYNAREEVYIIQAPTPEI 312 (353)
T ss_dssp TBTTEEEEEETTTTEEEEEECSSHHH
T ss_pred CCCceEEEEECCCCcEEEEECCCHHH
Confidence 234556655432 346666644333
No 96
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=32.30 E-value=1.4e+02 Score=24.02 Aligned_cols=70 Identities=7% Similarity=0.082 Sum_probs=47.7
Q ss_pred ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCC----CeeeecCcH-HHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEY----DLLMASTRK-TEIVTVLV 179 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~----D~ll~s~~k-tElvt~L~ 179 (229)
+.++-.|.|++..|++++.++ -.+....+|..|+-.++ ...+-+|.+...... -.+|.|+.. .++...|.
T Consensus 98 ~~~~V~L~VS~~gI~v~d~~t~~evl~~c~l~~ISFcgv-d~d~k~FaFI~~~~~~~f~CHVF~cek~A~~ls~aI~ 173 (176)
T 2yt0_A 98 DWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGV-GKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQ 173 (176)
T ss_dssp TSCEEEEECGGGEEEEEESSCTTCEEEEEETTTCCEEEE-CSSTTEEEEEEEEETTEEEEEEEEESSCSHHHHHHHH
T ss_pred cCcceEEEEcCCEEEEEecCCCcceecccceEEeeeEcc-CCCCcEEEEEEeCCCCCEEEEEEEccCChhHHHHHHH
Confidence 457788999999999999875 36777799999999999 455556666654322 334445444 44444443
No 97
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=32.13 E-value=1.8e+02 Score=22.63 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=51.9
Q ss_pred CceeeeEEEEecCeEEEecCCcceeEEEeeccccceEEEeccCCcEEEEEe--CCC------CCeeeecCcHHHHHHHHH
Q 027012 108 GKMKRRILLITDFAIYLVDPETDALKRRIALAAVEKMCLSELSDNFFAIII--PSE------YDLLMASTRKTEIVTVLV 179 (229)
Q Consensus 108 gK~~~R~LiITd~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~~~VIhv--~~e------~D~ll~s~~ktElvt~L~ 179 (229)
.+.++-.|.|+...|-++++.+-.+-..-||..|+-.+-. .++|..-. +.+ .-.+|.|..-.+++..|.
T Consensus 50 ~~~~~V~L~IS~~gIkv~d~~t~~~i~~~~l~~ISf~a~~---~~~f~fIar~~~~~~~~~~~CHVF~~~~A~~I~~tig 126 (162)
T 4dbb_A 50 QPMTEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADI---GNIVVLMARRRMPRSQYKMICHVFESEDAQLIAQSIG 126 (162)
T ss_dssp CCCEEEEEEEESSEEEEEETTTCCEEEEEEGGGEEEEEEE---TTEEEEEEEECCSTTCEEEEEEEEECTTHHHHHHHHH
T ss_pred CCCcEEEEEEECCEEEEEECCCCcEEeeeecceeEEEEEC---CCEEEEEeccCCCCCCCcEEEEEEECCCHHHHHHHHH
Confidence 3567788999999999999988777777888888777643 23454433 321 245566766677777788
Q ss_pred HHHhc
Q 027012 180 EATKG 184 (229)
Q Consensus 180 ~~~~~ 184 (229)
+++..
T Consensus 127 qAF~~ 131 (162)
T 4dbb_A 127 QAFSV 131 (162)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88763
No 98
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=29.90 E-value=2.4e+02 Score=23.42 Aligned_cols=80 Identities=13% Similarity=0.187 Sum_probs=54.0
Q ss_pred cEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcc-eeEEEeeccccceEEEeccCCcEEEEEeCC--CCCeeeecCc
Q 027012 94 QVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETD-ALKRRIALAAVEKMCLSELSDNFFAIIIPS--EYDLLMASTR 170 (229)
Q Consensus 94 ~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~-klKrrIpL~~I~gVSvS~~~D~~~VIhv~~--e~D~ll~s~~ 170 (229)
--+|... ++.| .+..|-|+...|+++++..- ......|+++|..++.+. +-|.|++.+ +.++.|.++.
T Consensus 200 ~~~f~v~----~~~g--~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~---~~f~i~~~~~~~~~~~f~~~~ 270 (294)
T 1ef1_A 200 VNYFSIK----NKKG--SELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFND---KKFVIKPIDKKAPDFVFYAPR 270 (294)
T ss_dssp CEEEEEE----CTTC--CEEEEEEETTEEEEEETTCSSSCSEEEEGGGEEEEEEET---TEEEEEESSSSSCCEEEECSS
T ss_pred ceEEeee----cCCC--CEEEEEEecCcEEEEeCCCccccceEEEcccceEeeecC---CEEEEEEccCccceEEEEeCC
Confidence 3455552 3344 78888899999999987543 445679999999998774 456777743 3588898876
Q ss_pred H--HHHHHHHHHHH
Q 027012 171 K--TEIVTVLVEAT 182 (229)
Q Consensus 171 k--tElvt~L~~~~ 182 (229)
. .+-+..||..+
T Consensus 271 ~~~~k~l~~l~~~~ 284 (294)
T 1ef1_A 271 LRINKRILALCMGN 284 (294)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 4 33444555444
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=29.13 E-value=73 Score=27.28 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=29.9
Q ss_pred eeEEEEe--cCeEEEecCCcceeEEEeeccccceEEEeccCCc
Q 027012 112 RRILLIT--DFAIYLVDPETDALKRRIALAAVEKMCLSELSDN 152 (229)
Q Consensus 112 ~R~LiIT--d~aiY~ld~~~~klKrrIpL~~I~gVSvS~~~D~ 152 (229)
.++.++| +..++.+|+.++++...||+.. .|..+++..+.
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~ 138 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLTHNDQY 138 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCCEEECSSC
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCC-CceEEecCCCE
Confidence 3667777 7788888888899999999865 66666655443
No 100
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=26.94 E-value=2.8e+02 Score=23.30 Aligned_cols=82 Identities=17% Similarity=0.236 Sum_probs=54.9
Q ss_pred ccEEEeeeEEEeCCCCceeeeEEEEecCeEEEecCCcc-eeEEEeeccccceEEEeccCCcEEEEEeCCC--CCeeeecC
Q 027012 93 KQVLFADKILKFTGSGKMKRRILLITDFAIYLVDPETD-ALKRRIALAAVEKMCLSELSDNFFAIIIPSE--YDLLMAST 169 (229)
Q Consensus 93 e~VlFS~~V~Kinr~gK~~~R~LiITd~aiY~ld~~~~-klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e--~D~ll~s~ 169 (229)
+--+|... +..| .+..|-|+...|.++++.+. ......|+++|..++.+ ++-|.|.+.++ ..+.|.++
T Consensus 219 G~~~f~v~----~~~g--~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~---~~~f~i~~~~~~~~~~~f~~~ 289 (314)
T 1h4r_A 219 GVNYFAIR----NKKG--TELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYS---DKEFTIKPLDKKIDVFKFNSS 289 (314)
T ss_dssp TCEEEEEE----ETTC--CEEEEEECSSEEEEECTTCSSSCSEEEEGGGEEEEEEE---TTEEEEEESSTTSCCEEEECC
T ss_pred CceEEEee----cCCC--CEEEEEEeCCceEEEeCCCCcccceEEecccceEEEee---CCEEEEEEcCCCCceEEEEcC
Confidence 44566554 3344 67788899999999998543 34567999999988865 34566777443 47888776
Q ss_pred cH--HHHHHHHHHHHh
Q 027012 170 RK--TEIVTVLVEATK 183 (229)
Q Consensus 170 ~k--tElvt~L~~~~~ 183 (229)
.. .+-+..||..|.
T Consensus 290 ~~~~~k~i~~l~~~~h 305 (314)
T 1h4r_A 290 KLRVNKLILQLCIGNH 305 (314)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 53 445566665554
No 101
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=24.67 E-value=1.6e+02 Score=24.37 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=27.7
Q ss_pred CeEEEecCCcceeEEEeecc---ccceEEEeccCCcEEE
Q 027012 120 FAIYLVDPETDALKRRIALA---AVEKMCLSELSDNFFA 155 (229)
Q Consensus 120 ~aiY~ld~~~~klKrrIpL~---~I~gVSvS~~~D~~~V 155 (229)
..||.+|+.+.++.+.+++. ...++.+|+....+++
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 36999999888988888874 4788888886665544
No 102
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=23.41 E-value=2.2e+02 Score=20.75 Aligned_cols=37 Identities=8% Similarity=0.127 Sum_probs=28.1
Q ss_pred eeeeEEEEecCeEEEecCCc----ceeEEEeeccccceEEE
Q 027012 110 MKRRILLITDFAIYLVDPET----DALKRRIALAAVEKMCL 146 (229)
Q Consensus 110 ~~~R~LiITd~aiY~ld~~~----~klKrrIpL~~I~gVSv 146 (229)
=++|.++||+..|+..+... .+....|+|+.+..|+.
T Consensus 20 Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~ 60 (117)
T 2rov_A 20 WVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRP 60 (117)
T ss_dssp CCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEE
T ss_pred cEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEE
Confidence 57899999999999887532 24577899987766543
No 103
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=23.04 E-value=2.5e+02 Score=21.39 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=56.1
Q ss_pred EEEeeeEEEeCCCC-c--eeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCC------cEEEEEeCCC---
Q 027012 95 VLFADKILKFTGSG-K--MKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSD------NFFAIIIPSE--- 161 (229)
Q Consensus 95 VlFS~~V~Kinr~g-K--~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D------~~~VIhv~~e--- 161 (229)
|+=.....|-|... | -++|.+|||+..||=..... -..+--|||..+ ++....+ ..|.|+.|+.
T Consensus 12 VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~---~vr~v~~~~~~rk~~F~l~~~d~r~v 88 (125)
T 1dyn_A 12 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNL---KLRDVEKGFMSSKHIFALFNTEQRNV 88 (125)
T ss_dssp EEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTE---EEEECCSCSSSSCEEEEEEETTSSCS
T ss_pred eEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcccccceEEECCCc---eEeccCCCCCCCceEEEEECCCCccc
Confidence 66677777766532 3 68999999999998886433 455667998665 3333333 3566665541
Q ss_pred ---C-CeeeecCcHHHHHHHHHHHHh
Q 027012 162 ---Y-DLLMASTRKTEIVTVLVEATK 183 (229)
Q Consensus 162 ---~-D~ll~s~~ktElvt~L~~~~~ 183 (229)
+ -|.|+++.-.|.-..+....+
T Consensus 89 ~~~h~~y~LsA~t~ee~~~Wi~s~~r 114 (125)
T 1dyn_A 89 YKDYRQLELACETQEEVDSWKASFLR 114 (125)
T ss_dssp STTCSSEEEEESSHHHHHHHHHHHHH
T ss_pred cccceEEEEeCCCHHHHHHHHHHHHh
Confidence 2 566777777777777665433
No 104
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=22.94 E-value=1.8e+02 Score=26.03 Aligned_cols=47 Identities=9% Similarity=0.200 Sum_probs=33.9
Q ss_pred CeEEEecCCcceeEEEeeccc-cceEEEeccCCcEEEEEeCCCCCeee
Q 027012 120 FAIYLVDPETDALKRRIALAA-VEKMCLSELSDNFFAIIIPSEYDLLM 166 (229)
Q Consensus 120 ~aiY~ld~~~~klKrrIpL~~-I~gVSvS~~~D~~~VIhv~~e~D~ll 166 (229)
+.|+.+|.++.++.++|++.. +.+|.+|+.....+++-....+++.+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsV 358 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYI 358 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEE
Confidence 469999999999999999976 77888888876443332233455544
No 105
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=21.38 E-value=3.3e+02 Score=22.05 Aligned_cols=75 Identities=9% Similarity=0.134 Sum_probs=50.9
Q ss_pred ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCCC----eeeec-CcHHHHHHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEYD----LLMAS-TRKTEIVTVLVEAT 182 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~D----~ll~s-~~ktElvt~L~~~~ 182 (229)
+.++-.|-|++..|.+++.++ -.+....+|..|+-..+ ...+-+|.+......+ .+|.| +.-.++...+..|+
T Consensus 52 k~~~V~L~VS~~gI~v~d~~t~~e~l~~~~I~~ISFc~v-d~d~k~FaFI~~~~~~~f~CHVF~c~k~A~~vs~aV~~Af 130 (185)
T 2ysz_A 52 DWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGV-GKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAAC 130 (185)
T ss_dssp TSCEEEEEEETTEEEEEESSCSSCEEEEECTTTCCEEEC-CSSTTEEEEEEESSSSCEEEEEEEESSCSTTHHHHHHHHH
T ss_pred cCceEEEEEecCEEEEEecCCCcceeeeccEEEeeeecc-CCCCcEEEEEecCCCccEEEEEEEccCchHHHHHHHHHHH
Confidence 567788999999999999865 36777789999999998 4555577776643322 23334 33344555556666
Q ss_pred hc
Q 027012 183 KG 184 (229)
Q Consensus 183 ~~ 184 (229)
+.
T Consensus 131 ~l 132 (185)
T 2ysz_A 131 SG 132 (185)
T ss_dssp HS
T ss_pred HH
Confidence 54
No 106
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=21.38 E-value=2.8e+02 Score=21.19 Aligned_cols=74 Identities=8% Similarity=0.086 Sum_probs=50.1
Q ss_pred ceeeeEEEEecCeEEEecCCc-ceeEEEeeccccceEEEeccCCcEEEEEeCCCC----CeeeecC-cHHHHHHHHHHHH
Q 027012 109 KMKRRILLITDFAIYLVDPET-DALKRRIALAAVEKMCLSELSDNFFAIIIPSEY----DLLMAST-RKTEIVTVLVEAT 182 (229)
Q Consensus 109 K~~~R~LiITd~aiY~ld~~~-~klKrrIpL~~I~gVSvS~~~D~~~VIhv~~e~----D~ll~s~-~ktElvt~L~~~~ 182 (229)
+.++-.|-|++..|.+++..+ -.+....+|..|+-.++ ...+-+|.+...... -.+|.|+ .-.++...+..|+
T Consensus 52 ~~~~v~l~Vs~~gi~v~~~~~~~~~l~~~~l~~ISFc~~-d~~~k~FaFI~~~~~~~f~CHvF~c~~~A~~vs~aV~~A~ 130 (136)
T 1wgu_A 52 DWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGV-GKDVHTFAFIMDTGNQRFECHVFWCEPNAANVSEAVQAAC 130 (136)
T ss_dssp TSCEEEEEEETTEEEEECSSCSSCEEEEEETTTEEEEEE-CSSTTCEEEEEECSSSCEEEEEEECSSCTHHHHHHHHHHH
T ss_pred cCceEEEEEccCEEEEEecCCCCceeccceEEEeeeEec-CCCCcEEEEEEcCCCccEEEEEEEcCcchHHHHHHHHHHH
Confidence 457788999999999999865 36777789999999998 444446665553322 2334454 4455556666665
Q ss_pred h
Q 027012 183 K 183 (229)
Q Consensus 183 ~ 183 (229)
.
T Consensus 131 ~ 131 (136)
T 1wgu_A 131 S 131 (136)
T ss_dssp C
T ss_pred H
Confidence 4
No 107
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=21.23 E-value=3.6e+02 Score=22.49 Aligned_cols=85 Identities=11% Similarity=0.192 Sum_probs=49.1
Q ss_pred ccEEEeeeEEEeCC---CCceeeeEEEEecCeEEEecCC-------cceeEEEeeccccceEEE-eccCCcEEEEEe---
Q 027012 93 KQVLFADKILKFTG---SGKMKRRILLITDFAIYLVDPE-------TDALKRRIALAAVEKMCL-SELSDNFFAIII--- 158 (229)
Q Consensus 93 e~VlFS~~V~Kinr---~gK~~~R~LiITd~aiY~ld~~-------~~klKrrIpL~~I~gVSv-S~~~D~~~VIhv--- 158 (229)
+.++..+.+..... ..+.++|.+++=+..|....++ +|..|.+||++++ .|.= .....+-|.|..
T Consensus 201 g~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~-~v~e~~~~~~~~F~i~~~~~ 279 (311)
T 1nty_A 201 GELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSEL-GVTEHVEGDPCKFALWVGRT 279 (311)
T ss_dssp CCEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGE-EEECCCTTCTTEEEEEESSS
T ss_pred CCceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccce-eeEEccCCCCceEEEEeCCC
Confidence 34666666555432 2356788888877777766542 4778899999877 3332 222233455554
Q ss_pred C-CCCCeeeecCcHHHHHHHH
Q 027012 159 P-SEYDLLMASTRKTEIVTVL 178 (229)
Q Consensus 159 ~-~e~D~ll~s~~ktElvt~L 178 (229)
+ ++.-++|.+....|--.++
T Consensus 280 ~~~~~~~~l~a~s~~ek~~W~ 300 (311)
T 1nty_A 280 PTSDNKIVLKASSIENKQDWI 300 (311)
T ss_dssp CCTTTCEEEECSSHHHHHHHH
T ss_pred CCCCceEEEECCCHHHHHHHH
Confidence 2 2345777775555544333
No 108
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=21.13 E-value=4e+02 Score=22.90 Aligned_cols=90 Identities=11% Similarity=0.141 Sum_probs=50.0
Q ss_pred ccEEEeeeEEEeC------CCCceeeeEEEEecCeEEEecC---------------------CcceeEEEeeccccceEE
Q 027012 93 KQVLFADKILKFT------GSGKMKRRILLITDFAIYLVDP---------------------ETDALKRRIALAAVEKMC 145 (229)
Q Consensus 93 e~VlFS~~V~Kin------r~gK~~~R~LiITd~aiY~ld~---------------------~~~klKrrIpL~~I~gVS 145 (229)
+.++..+.+..++ +.++.++|.++|=+..|.++-. ..|+.+..|||+.+ .|.
T Consensus 236 g~ll~~~~~~~~~~~~~~~~~~k~~~~~~fLF~d~lll~~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~-~v~ 314 (377)
T 1foe_A 236 GDLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEAL-QVR 314 (377)
T ss_dssp GGEEEEEEEEESSCCHHHHTTCSSCEEEEEEETTEEEEEECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGE-EEE
T ss_pred cceeeecceeeccCchhhccccccceEEEEEcCCeEEEEeccccccccccccccccccccCCCceeEeeeccccce-EEE
Confidence 3556666666554 3346677777776666554411 25788999999887 343
Q ss_pred EeccCC----cEE-EEEeCC------CCCeeeecCc---HHHHHHHHHHHHh
Q 027012 146 LSELSD----NFF-AIIIPS------EYDLLMASTR---KTEIVTVLVEATK 183 (229)
Q Consensus 146 vS~~~D----~~~-VIhv~~------e~D~ll~s~~---ktElvt~L~~~~~ 183 (229)
-.+..| .+| ++|+.. +.=++|++.. |.+-+..|.++..
T Consensus 315 ~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~ 366 (377)
T 1foe_A 315 ALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILR 366 (377)
T ss_dssp CCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 333333 233 666642 2235666644 4444555544443
No 109
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=20.26 E-value=1.5e+02 Score=25.18 Aligned_cols=23 Identities=30% Similarity=0.406 Sum_probs=19.4
Q ss_pred cCeEEEecCCcceeEEEeecccc
Q 027012 119 DFAIYLVDPETDALKRRIALAAV 141 (229)
Q Consensus 119 d~aiY~ld~~~~klKrrIpL~~I 141 (229)
+..|+.||+.+.++...|+++.+
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L 213 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGI 213 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTG
T ss_pred CCeEEEEECCCCcEEEEEECCcC
Confidence 45789999999999999999755
Done!