BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027015
(229 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
Query: 19 RLQDGTIVAVKVLSVESKQG-EKEFMSEVA--SMANVNVCHENLVKLHGGCIDGPCRILV 75
RL DGT+VAVK L E QG E +F +EV SMA H NL++L G C+ R+LV
Sbjct: 58 RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMA----VHRNLLRLRGFCMTPTERLLV 113
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
Y YM N S++ L + + W R+ I +G RGLAY+H+ P ++HRD+K +NI
Sbjct: 114 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
LLD+ F + DFGL+KL H+ V GT+G++APEY +G+ + K+DV+ +GV+L
Sbjct: 174 LLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVML 233
Query: 196 LEIVSGRTAVDF 207
LE+++G+ A D
Sbjct: 234 LELITGQRAFDL 245
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 118/192 (61%), Gaps = 7/192 (3%)
Query: 19 RLQDGTIVAVKVLSVESKQG-EKEFMSEVA--SMANVNVCHENLVKLHGGCIDGPCRILV 75
RL DG +VAVK L E QG E +F +EV SMA H NL++L G C+ R+LV
Sbjct: 50 RLADGXLVAVKRLKEERTQGGELQFQTEVEMISMA----VHRNLLRLRGFCMTPTERLLV 105
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
Y YM N S++ L + + W R+ I +G RGLAY+H+ P ++HRD+K +NI
Sbjct: 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
LLD+ F + DFGL+KL H+ V G +G++APEY +G+ + K+DV+ +GV+L
Sbjct: 166 LLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVML 225
Query: 196 LEIVSGRTAVDF 207
LE+++G+ A D
Sbjct: 226 LELITGQRAFDL 237
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 121/188 (64%), Gaps = 8/188 (4%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC-HENLVKLHGGCIDGPCRILVYDY 78
L+DG VA+K + ES QG +EF +E+ +++ C H +LV L G C + IL+Y Y
Sbjct: 60 LRDGAKVALKRRTPESSQGIEEFETEIETLS---FCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
M N +L + L G + W+ R EI +G RGL Y+H ++HRD+K+ NILLD
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLD 173
Query: 139 QNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
+NF PKI+DFG+SK E + TH+ V GTLGY+ PEY I GRLT KSDVYSFGV+L E
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 198 IVSGRTAV 205
++ R+A+
Sbjct: 234 VLCARSAI 241
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 151 bits (382), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 120/188 (63%), Gaps = 8/188 (4%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC-HENLVKLHGGCIDGPCRILVYDY 78
L+DG VA+K + ES QG +EF +E+ +++ C H +LV L G C + IL+Y Y
Sbjct: 60 LRDGAKVALKRRTPESSQGIEEFETEIETLS---FCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
M N +L + L G + W+ R EI +G RGL Y+H ++HRD+K+ NILLD
Sbjct: 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLD 173
Query: 139 QNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
+NF PKI+DFG+SK E TH+ V GTLGY+ PEY I GRLT KSDVYSFGV+L E
Sbjct: 174 ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 198 IVSGRTAV 205
++ R+A+
Sbjct: 234 VLCARSAI 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 115/190 (60%), Gaps = 12/190 (6%)
Query: 22 DGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
+ T VAVK L+ + +++ +++F E+ MA HENLV+L G DG LVY
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYV 110
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
YMPN SL L + W R +I G G+ ++HE H +HRDIK++NILL
Sbjct: 111 YMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166
Query: 138 DQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
D+ F KISDFGL++ + T + +R+ GT Y+APE A+ G +T KSD+YSFGV+LL
Sbjct: 167 DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 225
Query: 197 EIVSGRTAVD 206
EI++G AVD
Sbjct: 226 EIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 22 DGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
+ T VAVK L+ + +++ +++F E+ MA HENLV+L G DG LVY
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYV 110
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
YMPN SL L + W R +I G G+ ++HE H +HRDIK++NILL
Sbjct: 111 YMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166
Query: 138 DQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
D+ F KISDFGL++ + T + R+ GT Y+APE A+ G +T KSD+YSFGV+LL
Sbjct: 167 DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 225
Query: 197 EIVSGRTAVD 206
EI++G AVD
Sbjct: 226 EIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 113/190 (59%), Gaps = 12/190 (6%)
Query: 22 DGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
+ T VAVK L+ + +++ +++F E+ MA HENLV+L G DG LVY
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYV 104
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
YMPN SL L + W R +I G G+ ++HE H +HRDIK++NILL
Sbjct: 105 YMPNGSLLDRLSCLDGT-PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 160
Query: 138 DQNFNPKISDFGLSKLFPENTTHI-STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
D+ F KISDFGL++ + + R+ GT Y+APE A+ G +T KSD+YSFGV+LL
Sbjct: 161 DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLL 219
Query: 197 EIVSGRTAVD 206
EI++G AVD
Sbjct: 220 EIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 12/190 (6%)
Query: 22 DGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
+ T VAVK L+ + +++ +++F E+ A HENLV+L G DG LVY
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ--HENLVELLGFSSDGDDLCLVYV 101
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y PN SL L + W R +I G G+ ++HE H +HRDIK++NILL
Sbjct: 102 YXPNGSLLDRLSCLDGT-PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 157
Query: 138 DQNFNPKISDFGLSKLFPENTTHI-STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
D+ F KISDFGL++ + + +R+ GT Y APE A+ G +T KSD+YSFGV+LL
Sbjct: 158 DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLL 216
Query: 197 EIVSGRTAVD 206
EI++G AVD
Sbjct: 217 EIITGLPAVD 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 23 GTIVAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G+ VAVK+L + E+ EF+ EVA M + H N+V G P +V +Y+
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLR--HPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL + LL + R + + R + + +G+ Y+H P +VHR++K+ N+L+D+
Sbjct: 118 RGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKK 175
Query: 141 FNPKISDFGLSKLFPENTTHISTR-VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ K+ DFGLS+L + +T +S++ AGT ++APE KSDVYSFGV+L E+
Sbjct: 176 YTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 200 S 200
+
Sbjct: 234 T 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 23 GTIVAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G+ VAVK+L + E+ EF+ EVA M + H N+V G P +V +Y+
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLR--HPNIVLFMGAVTQPPNLSIVTEYLS 117
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL + LL + R + + R + + +G+ Y+H P +VHRD+K+ N+L+D+
Sbjct: 118 RGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKK 175
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+ K+ DFGLS+L + S AGT ++APE KSDVYSFGV+L E+ +
Sbjct: 176 YTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 15/190 (7%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
QD +VAVK L S K+F E + N+ HE++VK +G C++G I+V++YM
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHIVKFYGVCVEGDPLIMVFEYMK 98
Query: 81 NNSLSQ---------TLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIK 131
+ L++ L+ E + I I G+ Y+ + H VHRD+
Sbjct: 99 HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLA 155
Query: 132 TSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYS 190
T N L+ +N KI DFG+S+ ++ + + + ++ PE + + T +SDV+S
Sbjct: 156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215
Query: 191 FGVLLLEIVS 200
GV+L EI +
Sbjct: 216 LGVVLWEIFT 225
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 10 EKVDLAPFIRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDG 69
E +L+P +D +VAVK L + K+F E + N+ HE++VK +G C DG
Sbjct: 35 ECYNLSP---TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEHIVKFYGVCGDG 89
Query: 70 PCRILVYDYMPNNSLSQ----------TLLGEEKRRAK--FGWKARREIIMGIGRGLAYI 117
I+V++YM + L++ L+ + R+AK G I I G+ Y+
Sbjct: 90 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL 149
Query: 118 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEY 176
+ H VHRD+ T N L+ N KI DFG+S+ ++ + + + ++ PE
Sbjct: 150 ASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPES 206
Query: 177 AISGRLTRKSDVYSFGVLLLEIVS 200
+ + T +SDV+SFGV+L EI +
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 115/221 (52%), Gaps = 27/221 (12%)
Query: 20 LQDGTIVAVKVLSVESKQGE-------KEFMSEVASMANVNVCHENLVKLHGGCIDGPCR 72
++D ++VA+K L + +GE +EF EV M+N+N H N+VKL+G + P R
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN--HPNIVKLYG-LMHNPPR 97
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +++P L LL + W + +++ I G+ Y+ + P +VHRD+++
Sbjct: 98 -MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRS 152
Query: 133 SNILL---DQN--FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY--AISGRLTRK 185
NI L D+N K++DFGLS + + H + + G ++APE A T K
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 186 SDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMK 226
+D YSF ++L I++G D + G+ ++ +R ++
Sbjct: 209 ADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMIREEGLR 248
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 33 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIXI-VTEYMSKGS 88
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 89 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 143
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 144 KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I++ +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYIVI-EYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKIR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I++ +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYIVI-EYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 36 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 91
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 92 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 146
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 147 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E++F+ E M ++ H LV+L+G C++ LV+++M + LS
Sbjct: 32 VAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 88
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 89 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 142
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 143 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 32 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 87
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 88 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 142
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 143 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E++F+ E M ++ H LV+L+G C++ LV+++M + LS
Sbjct: 34 VAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 91 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 144
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 34 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 89
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 90 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 144
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 145 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E++F+ E M ++ H LV+L+G C++ LV+++M + LS
Sbjct: 34 VAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 90
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 91 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKV 144
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 145 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E++F+ E M ++ H LV+L+G C++ LV+++M + LS
Sbjct: 37 VAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 94 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 147
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 148 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 27/221 (12%)
Query: 20 LQDGTIVAVKVLSVESKQGE-------KEFMSEVASMANVNVCHENLVKLHGGCIDGPCR 72
++D ++VA+K L + +GE +EF EV M+N+N H N+VKL+G + P R
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN--HPNIVKLYG-LMHNPPR 97
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +++P L LL + W + +++ I G+ Y+ + P +VHRD+++
Sbjct: 98 -MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRS 152
Query: 133 SNILL---DQN--FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY--AISGRLTRK 185
NI L D+N K++DFG S + + H + + G ++APE A T K
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 186 SDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMK 226
+D YSF ++L I++G D + G+ ++ +R ++
Sbjct: 209 ADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMIREEGLR 248
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E +F+ E M ++ H LV+L+G C++ LV+++M + LS
Sbjct: 54 VAIKTIK-EGSMSEDDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVFEFMEHGCLS 110
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 111 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 164
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 165 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 40 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMNKGS 95
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 96 LLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 150
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 151 KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VCEYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 264
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 265 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 319
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 264
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 265 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 319
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 27/221 (12%)
Query: 20 LQDGTIVAVKVLSVESKQGE-------KEFMSEVASMANVNVCHENLVKLHGGCIDGPCR 72
++D ++VA+K L + +GE +EF EV M+N+N H N+VKL+G + P R
Sbjct: 41 VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN--HPNIVKLYG-LMHNPPR 97
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +++P L LL + W + +++ I G+ Y+ + P +VHRD+++
Sbjct: 98 -MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRS 152
Query: 133 SNILL---DQN--FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY--AISGRLTRK 185
NI L D+N K++DF LS + + H + + G ++APE A T K
Sbjct: 153 PNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 186 SDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMK 226
+D YSF ++L I++G D + G+ ++ +R ++
Sbjct: 209 ADTYSFAMILYTILTGEGPFD-EYSYGKIKFINMIREEGLR 248
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 40 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMNKGS 95
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 96 LLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 150
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 151 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 209 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VGEYMSKGS 264
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 265 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 319
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD+ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VMEYMSKGC 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 292 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 347
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 348 LLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 402
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 403 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM
Sbjct: 43 TRVAIKTLKPGTMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGC 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 99 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 153
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 154 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + HE LV+L+ + P I V +YM S
Sbjct: 210 TRVAIKTLKPGNMSPEA-FLQEAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGS 265
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L GE + + ++ I G+AY+ + + VHRD++ +NIL+ +N
Sbjct: 266 LLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVC 320
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K++DFGL +L +N + + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 321 KVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K + E E++F+ E M ++ H LV+L+G C++ LV ++M + LS
Sbjct: 35 VAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L +R F + + + + G+AY+ E V+HRD+ N L+ +N K+
Sbjct: 92 DYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKV 145
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFG+++ ++ ST + + +PE R + KSDV+SFGVL+ E+ S
Sbjct: 146 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
QD +VAVK L S+ ++F E + + H+++V+ G C +G ++V++YM
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGRPLLMVFEYMR 103
Query: 81 NNSLSQTLL-----------GEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRD 129
+ L++ L GE+ G + + G+ Y+ H VHRD
Sbjct: 104 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRD 160
Query: 130 IKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDV 188
+ T N L+ Q KI DFG+S+ ++ + + R + ++ PE + + T +SDV
Sbjct: 161 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 220
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 221 WSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
QD +VAVK L S+ ++F E + + H+++V+ G C +G ++V++YM
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGRPLLMVFEYMR 97
Query: 81 NNSLSQTLL-----------GEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRD 129
+ L++ L GE+ G + + G+ Y+ H VHRD
Sbjct: 98 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRD 154
Query: 130 IKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDV 188
+ T N L+ Q KI DFG+S+ ++ + + R + ++ PE + + T +SDV
Sbjct: 155 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 214
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 215 WSFGVVLWEIFT 226
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VA+K L + E F+ E M + H+ LV+L+ + P I V +YM S
Sbjct: 34 TKVAIKTLKPGTMSPES-FLEEAQIMKKLK--HDKLVQLYAVVSEEPIYI-VTEYMNKGS 89
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E R K ++ + G+AYI + + +HRD++++NIL+
Sbjct: 90 LLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLIC 144
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI+DFGL++L +N + + APE A+ GR T KSDV+SFG+LL E+V+
Sbjct: 145 KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
QD +VAVK L S+ ++F E + + H+++V+ G C +G ++V++YM
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGRPLLMVFEYMR 126
Query: 81 NNSLSQTLL-----------GEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRD 129
+ L++ L GE+ G + + G+ Y+ H VHRD
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRD 183
Query: 130 IKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDV 188
+ T N L+ Q KI DFG+S+ ++ + + R + ++ PE + + T +SDV
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 244 WSFGVVLWEIFT 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 28 VKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQT 87
V + +ES+ K F+ E+ ++ VN H N+VKL+G C++ C LV +Y SL
Sbjct: 35 VAIKQIESESERKAFIVELRQLSRVN--HPNIVKLYGACLNPVC--LVMEYAEGGSLYNV 90
Query: 88 LLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KIS 146
L G E A + +G+AY+H ++HRD+K N+LL KI
Sbjct: 91 LHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 149
Query: 147 DFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
DFG + + TH+ T G+ ++APE + K DV+S+G++L E+++ R D
Sbjct: 150 DFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 28 VKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQT 87
V + +ES+ K F+ E+ ++ VN H N+VKL+G C++ C LV +Y SL
Sbjct: 34 VAIKQIESESERKAFIVELRQLSRVN--HPNIVKLYGACLNPVC--LVMEYAEGGSLYNV 89
Query: 88 LLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KIS 146
L G E A + +G+AY+H ++HRD+K N+LL KI
Sbjct: 90 LHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148
Query: 147 DFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
DFG + + TH+ T G+ ++APE + K DV+S+G++L E+++ R D
Sbjct: 149 DFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 39 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 90
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 91 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 145
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 146 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 205
Query: 200 S 200
+
Sbjct: 206 T 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 38 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 89
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 90 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 200 S 200
+
Sbjct: 205 T 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 72
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 40 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 91
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 92 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 146
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 147 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 206
Query: 200 S 200
+
Sbjct: 207 T 207
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L +++ ++F+SE + M + H N+++L G G ++V +YM N SL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD--HPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L + +F ++ G+G G+ Y+ + VHRD+ N+L+D N K
Sbjct: 138 DTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCK 191
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + APE + SDV+SFGV++ E+++
Sbjct: 192 VSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 33 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 84
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 85 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 139
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 140 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 199
Query: 200 S 200
+
Sbjct: 200 T 200
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE-KRRAKFGWKARREIIMGIGRGL 114
H N++ L G C+ P LV ++ L++ L G+ W + I RG+
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGM 118
Query: 115 AYIHEEIQPHVVHRDIKTSNILLDQNFNP--------KISDFGLSKLFPENTTHISTRVA 166
Y+H+E ++HRD+K+SNIL+ Q KI+DFGL++ + TT +S A
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-HRTTKMSA--A 175
Query: 167 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
G ++APE + ++ SDV+S+GVLL E+++G
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 38 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 89
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 90 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 200 S 200
+
Sbjct: 205 T 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 46 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 97
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 98 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 152
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 153 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 212
Query: 200 S 200
+
Sbjct: 213 T 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 47 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 98
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 99 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 153
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 154 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 213
Query: 200 S 200
+
Sbjct: 214 T 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 44 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 95
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 96 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 150
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 151 TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
Query: 200 S 200
+
Sbjct: 211 T 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 38 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 89
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 90 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 200 S 200
+
Sbjct: 205 T 205
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L +++ ++F+SE + M + H N+++L G G ++V +YM N SL
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFD--HPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L + +F ++ G+G G+ Y+ + VHRD+ N+L+D N K
Sbjct: 138 DTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCK 191
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + APE + SDV+SFGV++ E+++
Sbjct: 192 VSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 75
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 132
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 70
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 127
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 128 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 78
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 135
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 136 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 43 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 94
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 95 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 149
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 150 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 209
Query: 200 S 200
+
Sbjct: 210 T 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 44 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 95
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 96 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 150
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 151 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
Query: 200 S 200
+
Sbjct: 211 T 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 103
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 160
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 161 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 77
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 134
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 135 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 79
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 136
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 137 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 72
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 71
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 128
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 129 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 90
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 147
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 76
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 133
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 134 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 72
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 129
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 90
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 147
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 48 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 99
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 100 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 154
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 155 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 214
Query: 200 S 200
+
Sbjct: 215 T 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 122 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 175
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 176 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 73
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +K + + + I +G+ Y
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEY 130
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HR++ T NIL++ KI DFGL+K+ P++ + + G + + AP
Sbjct: 131 LGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 105 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 158
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 14/195 (7%)
Query: 12 VDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDG 69
V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N+VK G C
Sbjct: 29 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDNIVKYKGVCYSA 86
Query: 70 PCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVH 127
R L+ +++P SL + L +K + + + I +G+ Y+ + +H
Sbjct: 87 GRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIH 140
Query: 128 RDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAPEYAISGRLTRK 185
RD+ T NIL++ KI DFGL+K+ P++ + G + + APE + +
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 186 SDVYSFGVLLLEIVS 200
SDV+SFGV+L E+ +
Sbjct: 201 SDVWSFGVVLYELFT 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 131
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 132 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 185
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VAVK + S E F++E M + H+ LVKLH P I+ ++M S
Sbjct: 40 TKVAVKTMKPGSMSVEA-FLAEANVMKTLQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGS 95
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L +E + + I G+A+I Q + +HRD++ +NIL+ +
Sbjct: 96 LLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVC 150
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI+DFGL+++ +N + + APE G T KSDV+SFG+LL+EIV+
Sbjct: 151 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 34 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 85
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HR+++ +NIL+
Sbjct: 86 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSD 140
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L +N + + APE G T KSDV+SFG+LL EIV
Sbjct: 141 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 200
Query: 200 S 200
+
Sbjct: 201 T 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VAVK + S E F++E M + H+ LVKLH P I+ ++M S
Sbjct: 213 TKVAVKTMKPGSMSVEA-FLAEANVMKTLQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGS 268
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L +E + + I G+A+I Q + +HRD++ +NIL+ +
Sbjct: 269 LLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVC 323
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI+DFGL+++ +N + + APE G T KSDV+SFG+LL+EIV+
Sbjct: 324 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGL+++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P +V +YMP +L
Sbjct: 60 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTLEPPFYIVTEYMPYGNLL 116
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 117 DYL--RECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKV 171
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + KSDV++FGVLL EI +
Sbjct: 172 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
+ +G V++ + LQD G +VAVK L +++ ++F E+ + ++ H+N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDN 75
Query: 59 LVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
+VK G C R L+ +Y+P SL L +R + I +G+ Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI---KLLQYTSQICKGMEY 132
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT--LGYLAP 174
+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + + AP
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + SDV+SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYM 79
T VAVK L KQG MS A +A N+ H+ LV+L+ P I+ +YM
Sbjct: 38 TKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYM 89
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
N SL L + K ++ I G+A+I E + +HRD++ +NIL+
Sbjct: 90 ENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSD 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ KI+DFGL++L + + + APE G T KSDV+SFG+LL EIV
Sbjct: 145 TLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 200 S 200
+
Sbjct: 205 T 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L + + ++F+SE + M + H N++ L G +++ +YM N SL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K +F ++ GIG G+ Y+ + VHRD+ NIL++ N K
Sbjct: 118 DAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCK 171
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFG+S++ ++ T G + + APE + T SDV+S+G+++ E++S
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N++ L G ++V +YM N SL
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIHLEGVVTKSKPVMIVTEYMENGSL 110
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L +K +F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 111 DTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCK 164
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + APE + T SDV+S+G+++ E+VS
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V +YM N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGL ++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 11 KVDLAPFIRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLVKLHGGCI 67
KV L + DGT +VAVK L ++ Q + E+ + + HE+++K G C
Sbjct: 46 KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY--HEHIIKYKGCCE 103
Query: 68 D-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 125
D G + LV +Y+P SL L R G I G+AY+H + H
Sbjct: 104 DAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ---HY 155
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLT 183
+HRD+ N+LLD + KI DFGL+K PE R G + + APE +
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFY 215
Query: 184 RKSDVYSFGVLLLEIVS 200
SDV+SFGV L E+++
Sbjct: 216 YASDVWSFGVTLYELLT 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L + + ++F+SE + M + H N++ L G +++ +YM N SL
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K +F ++ GIG G+ Y+ + VHRD+ NIL++ N K
Sbjct: 97 DAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 150
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFG+S++ ++ T G + + APE + T SDV+S+G+++ E++S
Sbjct: 151 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+V L G G ++V ++M N +L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFD--HPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K +F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 132 DAFL---RKHDGQFTVIQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCK 185
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ + T G + + APE + T SDV+S+G+++ E++S
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L + + ++F+SE + M + H N++ L G +++ +YM N SL
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIHLEGVVTKCKPVMIITEYMENGSL 102
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K +F ++ GIG G+ Y+ + VHRD+ NIL++ N K
Sbjct: 103 DAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCK 156
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFG+S++ ++ T G + + APE + T SDV+S+G+++ E++S
Sbjct: 157 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
++ +G V+L + L D G +VAVK L +++F E+ + + H +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL---HSD 84
Query: 59 LVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--IGRG 113
+ + G GP R LV +Y+P+ L L ++ RA+ A R ++ I +G
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQICKG 139
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 171
+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G + +
Sbjct: 140 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
APE +R+SDV+SFGV+L E+ +
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V + M N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
++ +G V+L + L D G +VAVK L +++F E+ + + H +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL---HSD 72
Query: 59 LVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--IGRG 113
+ + G GP R LV +Y+P+ L L ++ RA+ A R ++ I +G
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQICKG 127
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 171
+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G + +
Sbjct: 128 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
APE +R+SDV+SFGV+L E+ +
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V + M N SL
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 105 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 158
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 1 MASVGPIRLEKVDLAPFIRLQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 58
++ +G V+L + L D G +VAVK L +++F E+ + + H +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL---HSD 71
Query: 59 LVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--IGRG 113
+ + G GP R LV +Y+P+ L L ++ RA+ A R ++ I +G
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQICKG 126
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 171
+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G + +
Sbjct: 127 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
APE +R+SDV+SFGV+L E+ +
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 13/177 (7%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 108 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 161
Query: 146 SDFGLSK--LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ L E T+ + ++ + + PE + + + KSD+++FGVL+ EI S
Sbjct: 162 SDFGLSRYVLDDEETSSVGSKFP--VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 31 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 87
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 88 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 141
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 93 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 146
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L V +++ ++F+ E + M + H N+++L G ++V + M N SL
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L K A+F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + +PE + T SDV+S+G++L E++S
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 35 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 91
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 92 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 145
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 22 DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
+ T VAVK L + F+ E M + H+ LV+L+ ++ +YM
Sbjct: 36 NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQ--HDKLVRLYAVVTREEPIYIITEYMAK 92
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L +E + + I G+AYI + + +HRD++ +N+L+ ++
Sbjct: 93 GSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESL 147
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS- 200
KI+DFGL+++ +N + + APE G T KSDV+SFG+LL EIV+
Sbjct: 148 MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTY 207
Query: 201 ------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
GRT D L + + + +V + +LY
Sbjct: 208 GKIPYPGRTNADVMTALSQGYRMPRVENCPDELY 241
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 42 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 99 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 153 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 51 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 107
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 108 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 161
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VA+K++ E E EF+ E M N++ HE LV+L+G C ++ +YM N L
Sbjct: 36 VAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLL 92
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L + R +F + E+ + + Y+ + +HRD+ N L++ K+
Sbjct: 93 NYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 146
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
SDFGLS+ ++ S + + PE + + + KSD+++FGVL+ EI S
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI---LVYDYM 79
G +VAVK L +++F E+ + + H + + + G GP R LV +Y+
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKAL---HSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILL 137
P+ L L ++ RA+ A R ++ I +G+ Y+ VHRD+ NIL+
Sbjct: 93 PSGCLRDFL---QRHRARL--DASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILV 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLTRKSDVYSFGVLL 195
+ + KI+DFGL+KL P + R G + + APE +R+SDV+SFGV+L
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL 204
Query: 196 LEIVS 200
E+ +
Sbjct: 205 YELFT 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 11 KVDLAPFIRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLVKLHGGCI 67
KV L + DGT +VAVK L + Q + E+ + + HE+++K G C
Sbjct: 29 KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY--HEHIIKYKGCCE 86
Query: 68 DGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 125
D + L V +Y+P SL L R G I G+AY+H + H
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ---HY 138
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLT 183
+HR++ N+LLD + KI DFGL+K PE + R G + + APE +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 184 RKSDVYSFGVLLLEIVS 200
SDV+SFGV L E+++
Sbjct: 199 YASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 11 KVDLAPFIRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLVKLHGGCI 67
KV L + DGT +VAVK L + Q + E+ + + HE+++K G C
Sbjct: 29 KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY--HEHIIKYKGCCE 86
Query: 68 DGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 125
D + L V +Y+P SL L R G I G+AY+H + H
Sbjct: 87 DQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ---HY 138
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLT 183
+HR++ N+LLD + KI DFGL+K PE + R G + + APE +
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY 198
Query: 184 RKSDVYSFGVLLLEIVS 200
SDV+SFGV L E+++
Sbjct: 199 YASDVWSFGVTLYELLT 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 36 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 93
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P + + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 94 YAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 146
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 147 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 202
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 96 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 150
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 151 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 103 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 157
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 158 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 96 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 150
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 151 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 27/199 (13%)
Query: 24 TIVAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM--- 79
T+VAVK+L E S + +F E A MA + + N+VKL G C G L+++YM
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFD--NPNIVKLLGVCAVGKPMCLLFEYMAYG 135
Query: 80 ----------PNN--SLSQTLLGEEKRRAKFG-----WKARREIIMGIGRGLAYIHEEIQ 122
P+ SLS + L R + G + I + G+AY+ E
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-- 193
Query: 123 PHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGR 181
VHRD+ T N L+ +N KI+DFGLS+ ++ + A + ++ PE R
Sbjct: 194 -KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR 252
Query: 182 LTRKSDVYSFGVLLLEIVS 200
T +SDV+++GV+L EI S
Sbjct: 253 YTTESDVWAYGVVLWEIFS 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 99 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 153
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 154 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 42 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 99 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 153
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 154 ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 22/207 (10%)
Query: 26 VAVKVLSVESKQGE---KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VA+K + + ++ E K F EV + + ++ H+N+V + + C LV +Y+
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLS--HQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+LS+ + +I+ GI + H+ +VHRDIK NIL+D N
Sbjct: 97 TLSEYIESHGPLSVDTAINFTNQILDGI----KHAHD---MRIVHRDIKPQNILIDSNKT 149
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV--- 199
KI DFG++K E + + V GT+ Y +PE A +D+YS G++L E++
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
Query: 200 ---SGRTAVDFDVQLGEYHLVDKVRSI 223
+G TAV ++ H+ D V ++
Sbjct: 210 PPFNGETAVSIAIK----HIQDSVPNV 232
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 103 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 157
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 35 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 92
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 93 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 145
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 146 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 201
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 202 EFLVGKPPFEANTYQETYKRISRV 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 45 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 102 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 156
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 157 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 100 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 154
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 155 ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 103 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 157
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 30 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 87
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 88 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 140
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 141 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 196
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 197 EFLVGKPPFEANTYQETYKRISRV 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 103 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 157
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 32 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 89
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 90 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 142
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T ++GTL YL PE I GR+ K D++S GVL
Sbjct: 143 GSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 198
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRV 222
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 54 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 111 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 165
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 166 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 100 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 154
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 155 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 43 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 100 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 154
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 155 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 46 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 103 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 157
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 41 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 98 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 152
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 36 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 93
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 94 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 146
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 147 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 202
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV 226
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 32 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 89
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 90 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 142
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 143 GSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 198
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRV 222
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 28 QRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 85
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 86 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 138
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 139 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 194
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 195 EFLVGKPPFEANTYQETYKRISRV 218
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 39 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HRD+ N L+ +N K+
Sbjct: 96 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKV 150
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 151 ADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 35 QSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 92
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ ++F + I + L+Y H + V+HRDIK N+LL
Sbjct: 93 YAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 145
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
N KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 146 GSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 201
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G + Y + +V
Sbjct: 202 EFLVGMPPFEAHTYQETYRRISRV 225
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 48 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 105
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 106 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 158
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 159 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 214
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 215 EFLVGKPPFEANTYQETYKRISRV 238
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 36 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 93
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 94 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 146
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 147 GSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 202
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV 226
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 57 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 114
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 115 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 167
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 168 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 223
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 224 EFLVGKPPFEANTYQETYKRISRV 247
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
Query: 25 IVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VA+K L S +++ ++F+SE + M + H N++ L G +++ ++M N S
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L + +F ++ GI G+ Y+ + + VHRD+ NIL++ N
Sbjct: 121 LDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVC 174
Query: 144 KISDFGLSKLFPENTTH--ISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGLS+ ++T+ ++ + G + + APE + T SDV+S+G+++ E++
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
Query: 200 S 200
S
Sbjct: 235 S 235
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 26 VAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L + ++ +F+ E M + H N+++L G +++ +YM N +L
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ L ++ +F ++ GI G+ Y+ + VHRD+ NIL++ N K
Sbjct: 134 DKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCK 187
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+SDFGLS++ ++ T G + + APE + T SDV+SFG+++ E+++
Sbjct: 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 36 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 93
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 94 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 146
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + T + GTL YL PE I GR K D++S GVL
Sbjct: 147 GSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-XIEGRXHDEKVDLWSLGVLCY 202
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV 226
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 26 VAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCIDGPC----RILVYDYMP 80
VAVK+ ++ KQ + E+ EV S+ + HEN+++ G G L+ +
Sbjct: 50 VAVKIFPIQDKQSWQNEY--EVYSLPGMK--HENILQFIGAEKRGTSVDVDLWLITAFHE 105
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-------QPHVVHRDIKTS 133
SLS L + W I + RGLAY+HE+I +P + HRDIK+
Sbjct: 106 KGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 134 NILLDQNFNPKISDFGLSKLFPENTTHISTR-VAGTLGYLAPEYAISGRLTRKS------ 186
N+LL N I+DFGL+ F + T GT Y+APE + G + +
Sbjct: 161 NVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRI 219
Query: 187 DVYSFGVLLLEIVSGRTAVD---------FDVQLGEYHLVDKVRSI 223
D+Y+ G++L E+ S TA D F+ ++G++ ++ ++ +
Sbjct: 220 DMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV 265
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI++FG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 25/180 (13%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T VAVK + S E F++E M + H+ LVKLH P I+ ++M S
Sbjct: 207 TKVAVKTMKPGSMSVEA-FLAEANVMKTLQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGS 262
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L +E + + I G+A+I Q + +HRD++ +NIL+ +
Sbjct: 263 LLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVC 317
Query: 144 KISDFGLSKL---FPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI+DFGL+++ FP + + APE G T KSDV+SFG+LL+EIV+
Sbjct: 318 KIADFGLARVGAKFP-------------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 100/203 (49%), Gaps = 35/203 (17%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L + E ++ +SE + VN H +++KL+G C DGP +L+ +Y
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPHVIKLYGACSQDGPL-LLIVEYAKY 110
Query: 82 NSLSQTLLGEEKRRAKFGW--------------KARREIIMG--------IGRGLAYIHE 119
SL L E R+ G+ R + MG I +G+ Y+ E
Sbjct: 111 GSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 120 EIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYA 177
+VHRD+ NIL+ + KISDFGLS+ E +++ R G + ++A E
Sbjct: 169 M---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK-RSQGRIPVKWMAIESL 224
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
T +SDV+SFGVLL EIV+
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 36 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 93
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P + + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 94 YAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 146
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 147 GSAGELKIADFGWSVHAPSSR---RXXLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 202
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 203 EFLVGKPPFEANTYQETYKRISRV 226
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 31 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 88
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 89 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 141
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 142 GSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 197
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 198 EFLVGKPPFEANTYQETYKRISRV 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 33 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 90
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 91 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 143
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI++FG S P + T + GTL YL PE I GR+ K D++S GVL
Sbjct: 144 GSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 199
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 200 EFLVGKPPFEANTYQETYKRISRV 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 24 TIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
+ VA+K L +++ +EF+SE + M H N+++L G + +++ ++M N
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFE--HPNIIRLEGVVTNSMPVMILTEFMENG 100
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+L L + +F ++ GI G+ Y+ E VHRD+ NIL++ N
Sbjct: 101 ALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLV 154
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEI 198
K+SDFGLS+ EN++ ++ + G + + APE + T SD +S+G+++ E+
Sbjct: 155 CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
Query: 199 VS 200
+S
Sbjct: 215 MS 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 32 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 89
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 90 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 142
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 143 GSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 198
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 199 EFLVGKPPFEANTYQETYKRISRV 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 33 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 90
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 91 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 143
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 144 GSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 199
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 200 EFLVGKPPFEANTYQETYKRISRV 223
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIADFGWSVHAPSSR---RAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 33/202 (16%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L + E ++ +SE + VN H +++KL+G C DGP +L+ +Y
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPHVIKLYGACSQDGPL-LLIVEYAKY 110
Query: 82 NSLSQTLLGEEKRRAKFGW--------------KARREIIMG--------IGRGLAYIHE 119
SL L E R+ G+ R + MG I +G+ Y+ E
Sbjct: 111 GSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 120 EIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAI 178
+VHRD+ NIL+ + KISDFGLS+ ++ E++ ++ + ++A E
Sbjct: 169 M---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 179 SGRLTRKSDVYSFGVLLLEIVS 200
T +SDV+SFGVLL EIV+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 33/202 (16%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L + E ++ +SE + VN H +++KL+G C DGP +L+ +Y
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPHVIKLYGACSQDGPL-LLIVEYAKY 110
Query: 82 NSLSQTLLGEEKRRAKFGW--------------KARREIIMG--------IGRGLAYIHE 119
SL L E R+ G+ R + MG I +G+ Y+ E
Sbjct: 111 GSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 120 EIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAI 178
+VHRD+ NIL+ + KISDFGLS+ ++ E++ ++ + ++A E
Sbjct: 169 M---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLF 225
Query: 179 SGRLTRKSDVYSFGVLLLEIVS 200
T +SDV+SFGVLL EIV+
Sbjct: 226 DHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 34 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 92 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 144
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 145 GSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 200
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 201 EFLVGKPPFEANTYQETYKRISRV 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 24 TIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
+ VA+K L +++ +EF+SE + M H N+++L G + +++ ++M N
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFE--HPNIIRLEGVVTNSMPVMILTEFMENG 102
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+L L + +F ++ GI G+ Y+ E VHRD+ NIL++ N
Sbjct: 103 ALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLV 156
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLG------YLAPEYAISGRLTRKSDVYSFGVLLL 196
K+SDFGLS+ EN++ + +LG + APE + T SD +S+G+++
Sbjct: 157 CKVSDFGLSRFLEENSSDPTE--TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 214
Query: 197 EIVS 200
E++S
Sbjct: 215 EVMS 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 35 QSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 92
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ ++F + I + L+Y H + V+HRDIK N+LL
Sbjct: 93 YAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 145
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
N KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 146 GSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 201
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G + Y + +V
Sbjct: 202 EFLVGMPPFEAHTYQETYRRISRV 225
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 21 QDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDY 78
+G A+KVL E + + E ++ M ++ V H ++++ G D ++ DY
Sbjct: 29 HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-VTHPFIIRMWGTFQDAQQIFMIMDY 87
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+ L L ++ +F + + L Y+H + +++RD+K NILLD
Sbjct: 88 IEGGELFSLL----RKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLD 140
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
+N + KI+DFG +K P+ ++ + GT Y+APE + + D +SFG+L+ E+
Sbjct: 141 KNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
Query: 199 VSGRTA 204
++G T
Sbjct: 197 LAGYTP 202
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 25 IVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
I+A+KVL +E E + EV +++ H N+++L+G D L+ +Y P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDSTRVYLILEYAPL 92
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 93 GTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAG 145
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL E +
Sbjct: 146 ELKIADFGWSVHAPSSR---RAALCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 201 GRTAVDFDVQLGEYHLVDKV 220
G+ + + Y + +V
Sbjct: 202 GKPPFEANTYQDTYKRISRV 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q I+A+KVL +E E + EV +++ H N+++L+G D L+ +
Sbjct: 57 QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILE 114
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y P ++ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 115 YAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL 167
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLL 196
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL
Sbjct: 168 GSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCY 223
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKV 220
E + G+ + + Y + +V
Sbjct: 224 EFLVGKPPFEANTYQETYKRISRV 247
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 11 KVDLAPFIRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLVKLHGGCI 67
KV L + DGT +VAVK L Q + E+ + + HE++VK G C
Sbjct: 23 KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY--HEHIVKYKGCCE 80
Query: 68 D-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 125
D G + LV +Y+P SL L R G I G+AY+H + H
Sbjct: 81 DQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ---HY 132
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLT 183
+HR + N+LLD + KI DFGL+K PE + R G + + APE +
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 192
Query: 184 RKSDVYSFGVLLLEIVS 200
SDV+SFGV L E+++
Sbjct: 193 YASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 11 KVDLAPFIRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLVKLHGGCI 67
KV L + DGT +VAVK L Q + E+ + + HE++VK G C
Sbjct: 24 KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY--HEHIVKYKGCCE 81
Query: 68 D-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 125
D G + LV +Y+P SL L R G I G+AY+H + H
Sbjct: 82 DQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQ---HY 133
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLT 183
+HR + N+LLD + KI DFGL+K PE + R G + + APE +
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFY 193
Query: 184 RKSDVYSFGVLLLEIVS 200
SDV+SFGV L E+++
Sbjct: 194 YASDVWSFGVTLYELLT 210
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 22 DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
+ T VAVK L + F+ E M + H+ LV+L+ ++ ++M
Sbjct: 35 NSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQ--HDKLVRLYAVVTKEEPIYIITEFMAK 91
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L +E + + I G+AYI + + +HRD++ +N+L+ ++
Sbjct: 92 GSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESL 146
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS- 200
KI+DFGL+++ +N + + APE G T KS+V+SFG+LL EIV+
Sbjct: 147 MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTY 206
Query: 201 ------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
GRT D L + + + ++ + +LY
Sbjct: 207 GKIPYPGRTNADVMSALSQGYRMPRMENCPDELY 240
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 248 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HR++ N L+ +N K+
Sbjct: 305 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 359
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 245 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HR++ N L+ +N K+
Sbjct: 302 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 356
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 357 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK L ++ + E EF+ E A M + H NLV+L G C P ++ ++M +L
Sbjct: 287 VAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
L E R + + I + Y+ ++ + +HR++ N L+ +N K+
Sbjct: 344 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 398
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
+DFGLS+L +T + + APE + + KSDV++FGVLL EI +
Sbjct: 399 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 13/181 (7%)
Query: 25 IVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VA+K L S +++ ++F+SE + M + H N++ L G +++ ++M N S
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L + +F ++ GI G+ Y+ + + VHR + NIL++ N
Sbjct: 95 LDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRALAARNILVNSNLVC 148
Query: 144 KISDFGLSKLFPENTTH--ISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGLS+ ++T+ ++ + G + + APE + T SDV+S+G+++ E++
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 200 S 200
S
Sbjct: 209 S 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ E E EF E +M ++ H LVK +G C +V +Y+ N L
Sbjct: 35 VAVKMIK-EGSMSEDEFFQEAQTMMKLS--HPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91
Query: 86 QTLLGEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L K G + + E+ + G+A++ +HRD+ N L+D++
Sbjct: 92 NYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCV 143
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GR 202
K+SDFG+++ ++ S + + APE + + KSDV++FG+L+ E+ S G+
Sbjct: 144 KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203
Query: 203 TAVD 206
D
Sbjct: 204 MPYD 207
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKNTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 114
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 115 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 171
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 172 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 230
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G + L E H +DK + +LY
Sbjct: 231 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 281
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 168
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 225
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 284
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 285 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 335
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 111
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 112 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 168
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 169 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 227
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G + L E H +DK + +LY
Sbjct: 228 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 278
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 109
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 110 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 166
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 167 HRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 225
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G + L E H +DK + +LY
Sbjct: 226 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 276
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIITLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 93
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF K +I RG+ Y+H + ++HRD+K++NI L ++
Sbjct: 94 LYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTV 147
Query: 144 KISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE S + +SDVY+FG++L E++
Sbjct: 148 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 207
Query: 200 SGR 202
+G+
Sbjct: 208 TGQ 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 118
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L E ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 119 GNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIIHLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G + L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 85 SQTLLGEEKRRAKFGWKARREIIM--------GIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
L K A + R + + + +G+A++ + + +HRD+ N+L
Sbjct: 130 LNFL--RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 184
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L KI DFGL++ ++ +I A + ++APE T +SDV+S+G+LL
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 244
Query: 196 LEIVS 200
EI S
Sbjct: 245 WEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 85 SQTLLGEEKRRAKFGWKARREIIM--------GIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
L K A + R + + + +G+A++ + + +HRD+ N+L
Sbjct: 138 LNFL--RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 192
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L KI DFGL++ ++ +I A + ++APE T +SDV+S+G+LL
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 252
Query: 196 LEIVS 200
EI S
Sbjct: 253 WEIFS 257
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+KVL +++ + +E M E M ++ + +V+L G C +LV + L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVC-QAEALMLVMEMAGGGPL 96
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ L+G +R + E++ + G+ Y+ E+ + VHRD+ N+LL K
Sbjct: 97 HKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAK 150
Query: 145 ISDFGLSKLFPENTTHISTRVAGT--LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK + ++ + R AG L + APE + + +SDV+S+GV + E +S
Sbjct: 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 118
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L +F + + ++++ + RG+ Y+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTAPQLAIVTQWCEGSS 105
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF K +I RG+ Y+H + ++HRD+K++NI L ++
Sbjct: 106 LYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTV 159
Query: 144 KISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + +H +++G++ ++APE S + +SDVY+FG++L E++
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
Query: 200 SGR 202
+G+
Sbjct: 220 TGQ 222
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
+ G ++ +K L ++ ++ F+ EV M + H N++K G + +Y+
Sbjct: 33 ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE--HPNVLKFIGVLYKDKRLNFITEYIK 90
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
+L + + +++ W R I G+AY+H +++HRD+ + N L+ +N
Sbjct: 91 GGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVREN 144
Query: 141 FNPKISDFGLSKLFPENTTHIS-------------TRVAGTLGYLAPEYAISGR-LTRKS 186
N ++DFGL++L + T V G ++APE I+GR K
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE-MINGRSYDEKV 203
Query: 187 DVYSFGVLLLEIVSGRTAVDFD 208
DV+SFG++L EI+ GR D D
Sbjct: 204 DVFSFGIVLCEII-GRVNADPD 224
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N +I+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 23 GTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRI-LVYDYM 79
G VAVK L ES + E+ + N+ HEN+VK G C DG I L+ +++
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
P+ SL + L K + K K + + + I +G+ Y+ VHRD+ N+L++
Sbjct: 96 PSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVES 149
Query: 140 NFNPKISDFGLSKLF---PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
KI DFGL+K E T R + Y APE + + SDV+SFGV L
Sbjct: 150 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLH 208
Query: 197 EIVS 200
E+++
Sbjct: 209 ELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 23 GTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRI-LVYDYM 79
G VAVK L ES + E+ + N+ HEN+VK G C DG I L+ +++
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
P+ SL + L K + K K + + + I +G+ Y+ VHRD+ N+L++
Sbjct: 108 PSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVES 161
Query: 140 NFNPKISDFGLSKLF---PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
KI DFGL+K E T R + Y APE + + SDV+SFGV L
Sbjct: 162 EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLH 220
Query: 197 EIVS 200
E+++
Sbjct: 221 ELLT 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIVA-Y 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G + L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-GY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L ++ + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N + G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 85 -------SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSN 134
S+ L + + R+++ + +G+A++ + + +HRD+ N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194
Query: 135 ILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGV 193
+LL KI DFGL++ ++ +I A + ++APE T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 194 LLLEIVS 200
LL EI S
Sbjct: 255 LLWEIFS 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 105
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF K +I RG+ Y+H + ++HRD+K++NI L ++
Sbjct: 106 LYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTV 159
Query: 144 KISDFGL-SKLFPENTTHISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL ++ + +H +++G++ ++APE S + +SDVY+FG++L E++
Sbjct: 160 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
Query: 200 SGR 202
+G+
Sbjct: 220 TGQ 222
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 18/189 (9%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 85 SQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRDIKT 132
L + ++ + + R+++ + +G+A++ + + +HRD+
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 194
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSF 191
N+LL KI DFGL++ ++ +I A + ++APE T +SDV+S+
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 192 GVLLLEIVS 200
G+LL EI S
Sbjct: 255 GILLWEIFS 263
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 53 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 110
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 111 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 167
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 168 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 223
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 224 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 274
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 54 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 111
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 112 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 168
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 169 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 224
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 225 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 275
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 118
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 50 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 107
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 108 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 164
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 165 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 220
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 221 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 159
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 217 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 272
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 273 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 323
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 85 -------SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSN 134
S+ L + + R+++ + +G+A++ + + +HRD+ N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194
Query: 135 ILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGV 193
+LL KI DFGL++ ++ +I A + ++APE T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 194 LLLEIVS 200
LL EI S
Sbjct: 255 LLWEIFS 261
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 29/193 (15%)
Query: 23 GTIVAVKVLSVESKQGEKEF-MSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
G VA+K + ++S++G + E++ M + HEN+V+L+ LV+++M N
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIREISLMKELK--HENIVRLYDVIHTENKLTLVFEFMDN 87
Query: 82 N--------SLSQTLLGEEKRRAK-FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+ ++ T G E K F W+ + +GLA+ HE ++HRD+K
Sbjct: 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGLAFCHEN---KILHRDLKP 136
Query: 133 SNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISGRLTRKS-DVY 189
N+L+++ K+ DFGL++ F P NT S+ V TL Y AP+ + R S D++
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVV-TLWYRAPDVLMGSRTYSTSIDIW 193
Query: 190 SFGVLLLEIVSGR 202
S G +L E+++G+
Sbjct: 194 SCGCILAEMITGK 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 46 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 103
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 104 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 160
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 161 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 216
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 217 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 267
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR----ILVYDYMP 80
VAVK+ ++ KQ + SE + + HENL++ G L+ +
Sbjct: 40 FVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHD 96
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI--------QPHVVHRDIKT 132
SL+ L G W + + RGL+Y+HE++ +P + HRD K+
Sbjct: 97 KGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKS 151
Query: 133 SNILLDQNFNPKISDFGLSKLF----PENTTHISTRVAGTLGYLAPEYAISGRLTRKS-- 186
N+LL + ++DFGL+ F P TH GT Y+APE + G + +
Sbjct: 152 KNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPE-VLEGAINFQRDA 207
Query: 187 ----DVYSFGVLLLEIVSGRTAVD---------FDVQLGEYHLVDKVRSI 223
D+Y+ G++L E+VS A D F+ ++G++ +++++ +
Sbjct: 208 FLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEV 257
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 24 TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPN 81
T VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 61 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EYASK 118
Query: 82 NSLSQTLLGEEKRRAKFGWK---------ARREII---MGIGRGLAYIHEEIQPHVVHRD 129
+L + L ++ + + ++++ + RG+ Y+ + +HRD
Sbjct: 119 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTR 184
+ N+L+ ++ KI+DFGL++ + HI T G ++APE T
Sbjct: 176 LAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 231
Query: 185 KSDVYSFGVLLLEIVS-------GRTAVDFDVQLGEYHLVDKVRSINMKLY 228
+SDV+SFGVLL EI + G + L E H +DK + +LY
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY 282
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 3 SVGPIRLEKVDLAPFIRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 61
++G KV LA I G +VA+K++ + + +E+ ++ N+ H+++ +
Sbjct: 17 TIGTGGFAKVKLACHIL--TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR--HQHICQ 72
Query: 62 LHGGCIDGPCRILVYDYMPNNSL-----SQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 116
L+ +V +Y P L SQ L EE+ R F R+I+ + AY
Sbjct: 73 LYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF-----RQIVSAV----AY 123
Query: 117 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 176
+H + HRD+K N+L D+ K+ DFGL N + G+L Y APE
Sbjct: 124 VHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE- 179
Query: 177 AISGR--LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 214
I G+ L ++DV+S G+LL ++ G D D + Y
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY 219
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL +H E +V+RD+K NILLD + + +ISD GL+ PE T I RV GT+GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYM 352
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
APE + R T D ++ G LL E+++G++
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 12/178 (6%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+KVL +++ + +E M E M ++ + +V+L G C +LV + L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVC-QAEALMLVMEMAGGGPL 422
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ L+G +R + E++ + G+ Y+ E+ + VHR++ N+LL K
Sbjct: 423 HKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAK 476
Query: 145 ISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK + ++ + R AG L + APE + + +SDV+S+GV + E +S
Sbjct: 477 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 27 AVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
AVKV++ S + + + EV + ++ H N++KL D +V + L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL---DQNF 141
++ +R +F II + G+ Y+H+ ++VHRD+K NILL +++
Sbjct: 109 FDEII----KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+ KI DFGLS F +N T + R+ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 162 DIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 27 AVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
AVKV++ S + + + EV + ++ H N++KL D +V + L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL---DQNF 141
++ +R +F II + G+ Y+H+ ++VHRD+K NILL +++
Sbjct: 109 FDEII----KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+ KI DFGLS F +NT + R+ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 162 DIKIIDFGLSTCFQQNTK-MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL +H E +V+RD+K NILLD + + +ISD GL+ PE T I RV GT+GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYM 352
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
APE + R T D ++ G LL E+++G++
Sbjct: 353 APEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 29/231 (12%)
Query: 21 QDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
++ VAVK+L ++ + + + +SE+ M + H+N++ L G C DGP ++V +Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HKNIINLLGACTQDGPLYVIV-EY 122
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARR------------EIIMGIGRGLAYIHEEIQPHVV 126
+L + L + + R + RG+ Y+ + +
Sbjct: 123 ASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCI 179
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTR 184
HRD+ N+L+ +N KI+DFGL++ N G L ++APE T
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTNGRLPVKWMAPEALFDRVYTH 238
Query: 185 KSDVYSFGVLLLEIVS--GRTAVDFDVQ-----LGEYHLVDKVRSINMKLY 228
+SDV+SFGVL+ EI + G V+ L E H +DK + +LY
Sbjct: 239 QSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY 289
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 27 AVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
AVKV++ S + + + EV + ++ H N++KL D +V + L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL---DQNF 141
++ +R +F II + G+ Y+H+ ++VHRD+K NILL +++
Sbjct: 109 FDEII----KRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+ KI DFGLS F +NT + R+ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 162 DIKIIDFGLSTCFQQNTK-MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPN 81
G VAVK +++ + F++E + M + H NLV+L G ++ + +V +YM
Sbjct: 44 GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAK 99
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L + R+ G + + + + Y+ + VHRD+ N+L+ ++
Sbjct: 100 GSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDN 154
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGL+K ST+ G L + APE + + KSDV+SFG+LL EI
Sbjct: 155 VAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 208
Query: 200 S 200
S
Sbjct: 209 S 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K+L+ + EFM E MA+++ H +LV+L G C+ P LV MP+ L
Sbjct: 47 VAIKILNETTGPKANVEFMDEALIMASMD--HPHLVRLLGVCL-SPTIQLVTQLMPHGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + + G + + I +G+ Y+ E +VHRD+ N+L+ + K
Sbjct: 104 LEYV---HEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVK 157
Query: 145 ISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL++L + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPN 81
G VAVK +++ + F++E + M + H NLV+L G ++ + +V +YM
Sbjct: 29 GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAK 84
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L + R+ G + + + + Y+ + VHRD+ N+L+ ++
Sbjct: 85 GSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDN 139
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGL+K ST+ G L + APE + + KSDV+SFG+LL EI
Sbjct: 140 VAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 193
Query: 200 S 200
S
Sbjct: 194 S 194
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K+L+ + EFM E MA+++ H +LV+L G C+ P LV MP+ L
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMD--HPHLVRLLGVCL-SPTIQLVTQLMPHGCL 126
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + + G + + I +G+ Y+ E +VHRD+ N+L+ + K
Sbjct: 127 LEYV---HEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVK 180
Query: 145 ISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL++L + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 27/197 (13%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGC-IDGPCRILVYDYMPNNS 83
VAVK+L ++ E+E MSE+ M + HEN+V L G C + GP L+++Y
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLG-SHENIVNLLGACTLSGPI-YLIFEYCCYGD 135
Query: 84 L-------------------SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 124
L +Q L EE+ ++ + +G+ ++ +
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---S 192
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 183
VHRD+ N+L+ KI DFGL++ ++ ++ A + ++APE G T
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 252
Query: 184 RKSDVYSFGVLLLEIVS 200
KSDV+S+G+LL EI S
Sbjct: 253 IKSDVWSYGILLWEIFS 269
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPN 81
G VAVK + ++ + F++E + M + H NLV+L G ++ + +V +YM
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAK 271
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L + R+ G + + + + Y+ + VHRD+ N+L+ ++
Sbjct: 272 GSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDN 326
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGL+K ST+ G L + APE + + KSDV+SFG+LL EI
Sbjct: 327 VAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 200 S 200
S
Sbjct: 381 S 381
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 31 LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC-IDGPCRILVYDYMPNNSLSQTLL 89
L V K +K+ M + + V +N VK+H C + P + +Y+Y +++ +L
Sbjct: 37 LEVAIKMIDKKAMYKAGMVQRV----QNEVKIH--CQLKHPSILELYNYFEDSNYVYLVL 90
Query: 90 -----GEEKRRAK-----FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
GE R K F R + I G+ Y+H ++HRD+ SN+LL +
Sbjct: 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTR 147
Query: 140 NFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
N N KI+DFGL ++L + H + + GT Y++PE A +SDV+S G + +
Sbjct: 148 NMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205
Query: 199 VSGRTAVDFDV 209
+ GR D D
Sbjct: 206 LIGRPPFDTDT 216
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 56 HENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 114
H +++KL+ I P I +V +Y+ L + + + K R + I G+
Sbjct: 75 HPHIIKLYQ-VISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGV 129
Query: 115 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 174
Y H + VVHRD+K N+LLD + N KI+DFGLS + + G+ Y AP
Sbjct: 130 DYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAP 184
Query: 175 EYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVDFD 208
E ISGRL + D++S GV+L ++ G D D
Sbjct: 185 E-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 35/201 (17%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 85 -------SQTLLG--------------EEKRRAKFGWKARREII---MGIGRGLAYIHEE 120
++ +LG E+ R + R+++ + +G+A++ +
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL-----RDLLHFSSQVAQGMAFLASK 177
Query: 121 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAIS 179
+ +HRD+ N+LL KI DFGL++ ++ +I A + ++APE
Sbjct: 178 ---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 180 GRLTRKSDVYSFGVLLLEIVS 200
T +SDV+S+G+LL EI S
Sbjct: 235 CVYTVQSDVWSYGILLWEIFS 255
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 20 LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLH----GGCIDGPCR 72
L+D VAVKVL + + F E + A +N H +V ++ GP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDTGEAETPAGPLP 91
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +Y+ +L + E K E+I + L + H Q ++HRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH---QNGIIHRDVKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYS 190
+NIL+ K+ DFG+++ + N+ + V GT YL+PE A + +SDVYS
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 191 FGVLLLEIVSG 201
G +L E+++G
Sbjct: 205 LGCVLYEVLTG 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 31/195 (15%)
Query: 22 DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDG------------ 69
DG +K + +++ E+E + +A + +VN+ H N GC DG
Sbjct: 35 DGKTYVIKRVKYNNEKAERE-VKALAKLDHVNIVHYN------GCWDGFDYDPETSSKNS 87
Query: 70 -----PCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 124
C + ++ +L Q + E++R K E+ I +G+ YIH +
Sbjct: 88 SRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSK---K 142
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
+++RD+K SNI L KI DFGL + R GTL Y++PE S +
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGTLRYMSPEQISSQDYGK 200
Query: 185 KSDVYSFGVLLLEIV 199
+ D+Y+ G++L E++
Sbjct: 201 EVDLYALGLILAELL 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPN 81
G VAVK +++ + F++E + M + H NLV+L G ++ + +V +YM
Sbjct: 35 GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAK 90
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
SL L + R+ G + + + + Y+ + VHRD+ N+L+ ++
Sbjct: 91 GSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDN 145
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+SDFGL+K ST+ G L + APE + KSDV+SFG+LL EI
Sbjct: 146 VAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIY 199
Query: 200 S 200
S
Sbjct: 200 S 200
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANV-NVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
V +KV +E K G + F + M + ++ H ++V+L G C G LV Y+P SL
Sbjct: 45 VCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSL 101
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R G + + I +G+ Y+ E +VHR++ N+LL +
Sbjct: 102 LDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQ 155
Query: 145 ISDFGLSKLFPENTTHISTRVAGT-LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
++DFG++ L P + + A T + ++A E G+ T +SDV+S+GV + E+++
Sbjct: 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANV-NVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
V +KV +E K G + F + M + ++ H ++V+L G C G LV Y+P SL
Sbjct: 63 VCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSL 119
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R G + + I +G+ Y+ E +VHR++ N+LL +
Sbjct: 120 LDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQ 173
Query: 145 ISDFGLSKLFPENTTHISTRVAGT-LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
++DFG++ L P + + A T + ++A E G+ T +SDV+S+GV + E+++
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAVK++ + S +K F EV M +N H
Sbjct: 12 LKTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 66
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-----RQIVSAV-- 119
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 120 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYA 172
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 20 LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLH----GGCIDGPCR 72
L+D VAVKVL + + F E + A +N H +V ++ GP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDTGEAETPAGPLP 91
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +Y+ +L + E K E+I + L + H Q ++HRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH---QNGIIHRDVKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYS 190
+NI++ K+ DFG+++ + N+ + V GT YL+PE A + +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 191 FGVLLLEIVSG 201
G +L E+++G
Sbjct: 205 LGCVLYEVLTG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 20 LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLH----GGCIDGPCR 72
L+D VAVKVL + + F E + A +N H +V ++ GP
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDTGEAETPAGPLP 91
Query: 73 ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+V +Y+ +L + E K E+I + L + H Q ++HRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH---QNGIIHRDVKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYS 190
+NI++ K+ DFG+++ + N+ + V GT YL+PE A + +SDVYS
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 191 FGVLLLEIVSG 201
G +L E+++G
Sbjct: 205 LGCVLYEVLTG 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM 79
G AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVY 114
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD- 138
L ++ R +F II + G+ Y+H+ +VHRD+K N+LL+
Sbjct: 115 TGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLES 167
Query: 139 --QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L
Sbjct: 168 KSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 224
Query: 197 EIVSG 201
++SG
Sbjct: 225 ILLSG 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G I+A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 41 GLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 97
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K + + ++ + + RGLAY+ E+ Q ++HRD+K SNIL++
Sbjct: 98 GGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSR 151
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y+APE + +SD++S G+ L+E+
Sbjct: 152 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAV 208
Query: 201 GRTAV 205
GR +
Sbjct: 209 GRYPI 213
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM 79
G AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVY 108
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD- 138
L ++ R +F II + G+ Y+H + +VHRD+K N+LL+
Sbjct: 109 TGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLES 161
Query: 139 --QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L
Sbjct: 162 KSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 218
Query: 197 EIVSG 201
++SG
Sbjct: 219 ILLSG 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 19 RLQDGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRIL-- 74
R DG I+ K L S + EK+ + SEV + + H N+V+ + ID L
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYYDRIIDRTNTTLYI 84
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ--PHVVHRDIKT 132
V +Y L+ + K R + ++ + L H V+HRD+K
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFG 192
+N+ LD N K+ DFGL+++ +T+ T V GT Y++PE KSD++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 193 VLLLEIVS 200
LL E+ +
Sbjct: 204 CLLYELCA 211
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAVK++ + S +K F EV M +N H
Sbjct: 19 LKTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAVK++ + S +K F EV M +N H
Sbjct: 19 LKTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 26 VAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK++ ++ + + E+ A +N HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLN--HENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 85 SQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
+ +G + A+ + G+ Y+H + HRDIK N+LLD+
Sbjct: 93 FDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERD 142
Query: 142 NPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIV 199
N KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L ++
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML 202
Query: 200 SGRTAVD 206
+G D
Sbjct: 203 AGELPWD 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 96 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 149
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 96 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 149
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 150 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 9 LEKVDLAPFIRLQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLHGG 65
+ +V LA +RL VAVKVL + + F E + A +N H +V ++
Sbjct: 25 MSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYAT 80
Query: 66 ----CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 121
GP +V +Y+ +L + E K E+I + L + H
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH--- 133
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAIS 179
Q ++HRD+K +NI++ K+ DFG+++ + N+ + V GT YL+PE A
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 180 GRLTRKSDVYSFGVLLLEIVSG 201
+ +SDVYS G +L E+++G
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTG 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 95
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 96 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 149
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 27 AVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
AVKVL ++ K+ EK MSE + NV H LV LH V DY+
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLK-NVKHPFLVGLHFSFQTADKLYFVLDYINGGE 125
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L +R F R I L Y+H ++V+RD+K NILLD +
Sbjct: 126 LFYHL----QRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHI 178
Query: 144 KISDFGLSKLFPENTTHIST--RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++DFGL K EN H ST GT YLAPE R D + G +L E++ G
Sbjct: 179 VLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 44/208 (21%)
Query: 22 DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDG------------ 69
DG ++ + +++ E+E + +A + +VN+ H N GC DG
Sbjct: 36 DGKTYVIRRVKYNNEKAERE-VKALAKLDHVNIVHYN------GCWDGFDYDPETSDDSL 88
Query: 70 ------------------PCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 111
C + ++ +L Q + E++R K E+ I
Sbjct: 89 ESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQIT 146
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+G+ YIH + ++HRD+K SNI L KI DFGL + TR GTL Y
Sbjct: 147 KGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTLRY 201
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIV 199
++PE S ++ D+Y+ G++L E++
Sbjct: 202 MSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 106 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 159
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 100 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 153
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 9 LEKVDLAPFIRLQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLH-- 63
+ +V LA +RL VAVKVL + + F E + A +N H +V ++
Sbjct: 42 MSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDT 97
Query: 64 --GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 121
GP +V +Y+ +L + E K E+I + L + H
Sbjct: 98 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH--- 150
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAIS 179
Q ++HRD+K +NI++ K+ DFG+++ + N+ + V GT YL+PE A
Sbjct: 151 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 210
Query: 180 GRLTRKSDVYSFGVLLLEIVSG 201
+ +SDVYS G +L E+++G
Sbjct: 211 DSVDARSDVYSLGCVLYEVLTG 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 105
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 106 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 159
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 160 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 9 LEKVDLAPFIRLQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENLVKLH-- 63
+ +V LA +RL VAVKVL + + F E + A +N H +V ++
Sbjct: 25 MSEVHLARDLRLHRD--VAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDT 80
Query: 64 --GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 121
GP +V +Y+ +L + E K E+I + L + H
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSH--- 133
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAGTLGYLAPEYAIS 179
Q ++HRD+K +NI++ K+ DFG+++ + N+ + V GT YL+PE A
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 180 GRLTRKSDVYSFGVLLLEIVSG 201
+ +SDVYS G +L E+++G
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTG 215
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 26 VAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
VAVK L + + +F+ EV +M +++ H NL++L+G + P + +V + P
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
SL L K + F + + G+ Y+ + +HRD+ N+LL
Sbjct: 100 SLLDRL---RKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDL 153
Query: 143 PKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGL + P+N H + + APE + + SD + FGV L E+ +
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAVK++ + S +K F EV M +N H
Sbjct: 19 LKTIGKGNFAKVKLARHI--LTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--FCGAPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 26 VAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+KVL S + KE + E MA V + + +L G C+ + LV MP L
Sbjct: 49 VAIKVLRENTSPKANKEILDEAYVMAGVGSPY--VSRLLGICLTSTVQ-LVTQLMPYGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R + G + M I +G++Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDHV---RENRGRLGSQDLLNWCMQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVK 159
Query: 145 ISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL++L + T + + + ++A E + R T +SDV+S+GV + E+++
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 119 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 167
Query: 140 NFNPKISDFGLSK-LFPENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ ++ + + + L ++A E + + T KSDV+SFGVLL
Sbjct: 168 KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 197 EIVS 200
E+++
Sbjct: 228 ELMT 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 111
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 112 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 159
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 160 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 214
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 215 VIEMVDG 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 18 IRLQDGTI--VAVKVLSVE-SKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDG---- 69
++ +DGT VAVK + ++ S Q E +EF+SE A M + + H N+++L G CI+
Sbjct: 55 LKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--HPNVIRLLGVCIEMSSQG 112
Query: 70 -PCRILVYDYMPNNSLSQTLLGE--EKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVV 126
P +++ +M L LL E + + ++ I G+ Y+ + +
Sbjct: 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFL 169
Query: 127 HRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT-LGYLAPEYAISGRLTRK 185
HRD+ N +L + ++DFGLSK + R+A + ++A E T K
Sbjct: 170 HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK 229
Query: 186 SDVYSFGVLLLEIVS 200
SDV++FGV + EI +
Sbjct: 230 SDVWAFGVTMWEIAT 244
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM 79
G AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVY 131
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD- 138
L ++ R +F II + G+ Y+H + +VHRD+K N+LL+
Sbjct: 132 TGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLES 184
Query: 139 --QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L
Sbjct: 185 KSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 241
Query: 197 EIVSG 201
++SG
Sbjct: 242 ILLSG 246
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAV+++ + S +K F EV M +N H
Sbjct: 19 LKTIGKGNFAKVKLARHI--LTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G+ Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 40 KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 99
+E +E++ + +++ H N++KL D LV ++ L + ++ R KF
Sbjct: 91 EEIYNEISLLKSLD--HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFD 144
Query: 100 WKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN---FNPKISDFGLSKLFPE 156
I+ I G+ Y+H + ++VHRDIK NILL+ N KI DFGLS F +
Sbjct: 145 ECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 157 NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+ + R+ GT Y+APE + + K DV+S GV++ ++ G
Sbjct: 202 DYK-LRDRL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM 79
G AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVY 132
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD- 138
L ++ R +F II + G+ Y+H + +VHRD+K N+LL+
Sbjct: 133 TGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLES 185
Query: 139 --QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L
Sbjct: 186 KSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 242
Query: 197 EIVSG 201
++SG
Sbjct: 243 ILLSG 247
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 111
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 112 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 160
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 161 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 220
Query: 197 EIVS 200
E+++
Sbjct: 221 ELMT 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 102
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 103 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 150
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 151 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 205
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 206 VIEMVDG 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G VAVK++ + +Q + +EV M + H N+V+++ + G ++ +++
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ--HFNVVEMYKSYLVGEELWVLMEFLQGG 127
Query: 83 SL----SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L SQ L EE+ + + + LAY+H + V+HRDIK+ +ILL
Sbjct: 128 ALTDIVSQVRLNEEQIAT---------VCEAVLQALAYLHAQ---GVIHRDIKSDSILLT 175
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
+ K+SDFG ++ + GT ++APE + D++S G++++E+
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 199 VSG 201
V G
Sbjct: 235 VDG 237
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 120 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 168
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 197 EIVS 200
E+++
Sbjct: 229 ELMT 232
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 113
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 114 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 161
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 162 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 216
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 217 VIEMVDG 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 106
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 107 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 154
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 155 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 209
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 210 VIEMVDG 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 138
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 139 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 187
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 188 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 247
Query: 197 EIVS 200
E+++
Sbjct: 248 ELMT 251
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAV+++ + S +K F EV M +N H
Sbjct: 19 LKTIGKGNFAKVKLARHI--LTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 118
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 119 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 167
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 168 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 227
Query: 197 EIVS 200
E+++
Sbjct: 228 ELMT 231
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 137
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 138 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 186
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 187 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 246
Query: 197 EIVS 200
E+++
Sbjct: 247 ELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 116
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 117 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 165
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 166 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 225
Query: 197 EIVS 200
E+++
Sbjct: 226 ELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 114
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 115 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 163
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 223
Query: 197 EIVS 200
E+++
Sbjct: 224 ELMT 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 120 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 168
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 169 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 197 EIVS 200
E+++
Sbjct: 229 ELMT 232
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 91
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 92 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 141
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 142 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 201 GRTAVD 206
G D
Sbjct: 202 GELPWD 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ Y+ + VHRD+ N +LD+
Sbjct: 118 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKYLASK---KFVHRDLAARNCMLDE 166
Query: 140 NFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + + H T + ++A E + + T KSDV+SFGVLL
Sbjct: 167 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 197 EIVS 200
E+++
Sbjct: 227 ELMT 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTAPQLAIVTQWCEGSS 89
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 90 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 143
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 200 SGR 202
+G+
Sbjct: 204 TGQ 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 19/183 (10%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G VAVK + + +Q + +EV M + + H+N+V ++ + G +V +++
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYH--HDNVVDMYSSYLVGDELWVVMEFLEGG 127
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+L+ + + + + + R L+Y+H + V+HRDIK+ +ILL +
Sbjct: 128 ALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGR 179
Query: 143 PKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
K+SDFG +SK P+ + GT ++APE + D++S G++++E+
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKX-----LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 199 VSG 201
+ G
Sbjct: 235 IDG 237
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
+I + + L ++ E ++ ++HRDIK SNILLD++ N K+ DFG+S ++ TR
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TR 184
Query: 165 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGR 202
AG Y+APE I +R +SDV+S G+ L E+ +GR
Sbjct: 185 DAGCRPYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 94 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 143
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 201 GRTAVD 206
G D
Sbjct: 204 GELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 42 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 99
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 156
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ +F KI DFG+++ E T + G L ++APE G T SD+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM 215
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
VAVK++ ++ E + + + N + HEN+VK +G +G + L +Y L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 86 QTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ +G + A+ + G+ Y+H + HRDIK N+LLD+ N
Sbjct: 93 DRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDN 142
Query: 143 PKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KISDFGL+ +F N + ++ GTL Y+APE DV+S G++L +++
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 201 GRTAVD 206
G D
Sbjct: 203 GELPWD 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 3 SVGPIRLEKVDLAPFIRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLV 60
++G KV LA + G VAVK++ + ++ EV M +N H N+V
Sbjct: 22 TIGKGNFAKVKLARHVLT--GREVAVKIIDKTQLNPTSLQKLFREVRIMKILN--HPNIV 77
Query: 61 KLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGRGLA 115
KL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV----Q 128
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 175
Y H Q ++VHRD+K N+LLD + N KI+DFG S F + G+ Y APE
Sbjct: 129 YCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTFCGSPPYAAPE 183
Query: 176 YAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
+ + DV+S GV+L +VSG D
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 156
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 157 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 204
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 205 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 259
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 260 VIEMVDG 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N++K+ D +V + L + ++ + R E++ + LA
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP----KISDFGLSKLFPENTTHISTRVAGTLGY 171
Y H + HVVH+D+K NIL Q+ +P KI DFGL++LF + ST AGT Y
Sbjct: 139 YFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALY 192
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+APE +T K D++S GV++ +++G
Sbjct: 193 MAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 22 DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG----CIDGPCR-ILVY 76
D VAVKV S ++Q F++E + H+N+ + G DG +LV
Sbjct: 35 DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI------QPHVVHRDI 130
+Y PN SL + L W + + + RGLAY+H E+ +P + HRD+
Sbjct: 92 EYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146
Query: 131 KTSNILLDQNFNPKISDFGLSKLF-------PENTTHISTRVAGTLGYLAPEY---AISG 180
+ N+L+ + ISDFGLS P + + GT+ Y+APE A++
Sbjct: 147 NSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNL 206
Query: 181 R----LTRKSDVYSFGVLLLEI 198
R ++ D+Y+ G++ EI
Sbjct: 207 RDXESALKQVDMYALGLIYWEI 228
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGR 112
HEN+VK +G +G + L +Y L + +G + A+ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMA 115
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGY 171
G+ Y+H + HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y
Sbjct: 116 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 172 LAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 206
+APE DV+S G++L +++G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGR 112
HEN+VK +G +G + L +Y L + +G + A+ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMA 116
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGY 171
G+ Y+H + HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y
Sbjct: 117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 172 LAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 206
+APE DV+S G++L +++G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 117
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 118 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 166
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 167 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 226
Query: 197 EIVS 200
E+++
Sbjct: 227 ELMT 230
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 19 RLQDGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRIL-- 74
R DG I+ K L S + EK+ + SEV + + H N+V+ + ID L
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYYDRIIDRTNTTLYI 84
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ--PHVVHRDIKT 132
V +Y L+ + K R + ++ + L H V+HRD+K
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFG 192
+N+ LD N K+ DFGL+++ +T+ V GT Y++PE KSD++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 193 VLLLEIVS 200
LL E+ +
Sbjct: 204 CLLYELCA 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 91
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 92 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 145
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 146 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 205
Query: 200 SGR 202
+G+
Sbjct: 206 TGQ 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 42 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 99
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 156
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ +F KI DFG+++ E T + G L ++APE G T SD+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM 215
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 41 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 98
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 99 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 155
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ +F KI DFG+++ E T + G L ++APE G T SD+
Sbjct: 156 AARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM 214
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI S
Sbjct: 215 WSFGVVLWEITS 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 120 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 168
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 197 EIVS 200
E+++
Sbjct: 229 ELMT 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 27/187 (14%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +VAVK + + +Q + +EV M + HEN+V+++ + G +V +++
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVMEFLEGG 233
Query: 83 SLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+L+ T + EE+ A + + + + L+ +H + V+HRDIK+ +ILL
Sbjct: 234 ALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 281
Query: 139 QNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ K+SDFG +SK P + GT ++APE + D++S G++
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPELISRLPYGPEVDIWSLGIM 336
Query: 195 LLEIVSG 201
++E+V G
Sbjct: 337 VIEMVDG 343
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 121 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 169
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 170 KFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 197 EIVS 200
E+++
Sbjct: 230 ELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 119
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 120 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 168
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 169 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 228
Query: 197 EIVS 200
E+++
Sbjct: 229 ELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 124
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 125 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 173
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 174 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 233
Query: 197 EIVS 200
E+++
Sbjct: 234 ELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 120
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 121 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 169
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 170 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 229
Query: 197 EIVS 200
E+++
Sbjct: 230 ELMT 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 42 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 99
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 156
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKS 186
N ++ +F KI DFG+++ E R G + ++APE G T S
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDX---XRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 187 DVYSFGVLLLEIVS 200
D++SFGV+L EI S
Sbjct: 214 DMWSFGVVLWEITS 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK + KE FMSE M N++ H ++VKL G + P I++ Y P L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGEL 95
Query: 85 SQTLLGEEKRRAKFGWKARREII--MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
L R K K ++ + I + +AY+ E I + VHRDI NIL+
Sbjct: 96 GHYL-----ERNKNSLKVLTLVLYSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPEC 147
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFGLS+ + + ++ + +++PE R T SDV+ F V + EI+S
Sbjct: 148 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 39 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 96
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 97 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 153
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKS 186
N ++ +F KI DFG+++ E R G + ++APE G T S
Sbjct: 154 AARNCMVAHDFTVKIGDFGMTRDIXETDX---XRKGGKGLLPVRWMAPESLKDGVFTTSS 210
Query: 187 DVYSFGVLLLEIVS 200
D++SFGV+L EI S
Sbjct: 211 DMWSFGVVLWEITS 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 89
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 90 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 143
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 144 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 200 SGR 202
+G+
Sbjct: 204 TGQ 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ +N H+N+V+ G + R ++ + M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 178
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 198 IVS 200
I S
Sbjct: 239 IFS 241
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 42 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 99
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHRD+
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDL 156
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKS 186
N ++ +F KI DFG+++ E R G + ++APE G T S
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDX---XRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 187 DVYSFGVLLLEIVS 200
D++SFGV+L EI S
Sbjct: 214 DMWSFGVVLWEITS 227
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 129 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ +N H+N+V+ G + R ++ + M L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 192
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 198 IVS 200
I S
Sbjct: 253 IFS 255
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 94
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 95 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 148
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 149 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 200 SGR 202
+G+
Sbjct: 209 TGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 116
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 117 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 170
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 171 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 230
Query: 200 SGR 202
+G+
Sbjct: 231 TGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 94
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 95 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 148
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 149 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 200 SGR 202
+G+
Sbjct: 209 TGQ 211
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 129 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAG 167
I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 27 AVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGP-CRILVYDYMPNNSL 84
AVK L+ + GE +F++E M + + H N++ L G C+ ++V YM + L
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVLPYMKHGDL 178
Query: 85 SQTLLGEE-----KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
+ E K FG + + +G+ ++ + VHRD+ N +LD+
Sbjct: 179 RNFIRNETHNPTVKDLIGFG--------LQVAKGMKFLASK---KFVHRDLAARNCMLDE 227
Query: 140 NFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
F K++DFGL++ + ++ H T + ++A E + + T KSDV+SFGVLL
Sbjct: 228 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 287
Query: 197 EIVS 200
E+++
Sbjct: 288 ELMT 291
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK + KE FMSE M N++ H ++VKL G + P I++ Y P L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGEL 99
Query: 85 SQTLLGEEKRRAKFGWKARREII--MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
L R K K ++ + I + +AY+ E I + VHRDI NIL+
Sbjct: 100 GHYL-----ERNKNSLKVLTLVLYSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPEC 151
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFGLS+ + + ++ + +++PE R T SDV+ F V + EI+S
Sbjct: 152 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 134 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI----LVYDY 78
G VAVKV E + E V + HEN++ I G L+ DY
Sbjct: 60 GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRDIKTS 133
N SL L + K+ ++ GL ++H EI +P + HRD+K+
Sbjct: 117 HENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSK 171
Query: 134 NILLDQNFNPKISDFGLSKLFPENTTHI----STRVAGTLGYLAPEYAISGRLTRK---- 185
NIL+ +N I+D GL+ F +T + +TRV GT Y+ PE + L R
Sbjct: 172 NILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE-VLDESLNRNHFQS 229
Query: 186 ---SDVYSFGVLLLEIV 199
+D+YSFG++L E+
Sbjct: 230 YIMADMYSFGLILWEVA 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 135 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 126 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 26 VAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK + KE FMSE M N++ H ++VKL G + P I++ Y P L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGEL 111
Query: 85 SQTLLGEEKRRAKFGWKARREII--MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
L R K K ++ + I + +AY+ E I + VHRDI NIL+
Sbjct: 112 GHYL-----ERNKNSLKVLTLVLYSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPEC 163
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFGLS+ + + ++ + +++PE R T SDV+ F V + EI+S
Sbjct: 164 VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 131 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 137 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 129 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 47 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 104
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 105 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 161
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 162 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 220
Query: 195 LLEIVS 200
L EI +
Sbjct: 221 LWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
++ + T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++
Sbjct: 43 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIM 100
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDI 130
+ M L ++L E + + ++I G G+AY++ VHRD+
Sbjct: 101 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDL 157
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ ++F KI DFG+++ E T + G L +++PE G T SDV
Sbjct: 158 AARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 216
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 217 WSFGVVLWEIAT 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 129 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 117
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 118 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 171
Query: 144 KISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 172 KIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 200 SGR 202
+G+
Sbjct: 232 TGQ 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 127 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 127 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 131 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 111 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 115 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAG 167
I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
++ + T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIM 107
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDI 130
+ M L ++L E + + ++I G G+AY++ VHRD+
Sbjct: 108 ELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDL 164
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ ++F KI DFG+++ E T + G L +++PE G T SDV
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 224 WSFGVVLWEIAT 235
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
I+ KVL+ QG E E++ + + H +++KL+ I+V +Y N
Sbjct: 36 IINKKVLAKSDMQGRIE--REISYLRLLR--HPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ +R K + R I + Y H +VHRD+K N+LLD++ N K
Sbjct: 92 DYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 143
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGR 202
I+DFGLS + + ++ G+ Y APE ISG+L + DV+S GV+L ++ R
Sbjct: 144 IADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 200
Query: 203 TAVD 206
D
Sbjct: 201 LPFD 204
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 49 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 163
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 164 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 195 LLEIVS 200
L EI +
Sbjct: 223 LWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 50 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 164
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 165 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 195 LLEIVS 200
L EI +
Sbjct: 224 LWEIAT 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 129 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 78 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 192
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 193 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 195 LLEIVS 200
L EI +
Sbjct: 252 LWEIAT 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
I+ KVL+ QG E E++ + + H +++KL+ I+V +Y N
Sbjct: 40 IINKKVLAKSDMQGRIE--REISYLRLLR--HPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ +R K + R I + Y H +VHRD+K N+LLD++ N K
Sbjct: 96 DYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 147
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGR 202
I+DFGLS + + ++ G+ Y APE ISG+L + DV+S GV+L ++ R
Sbjct: 148 IADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 204
Query: 203 TAVD 206
D
Sbjct: 205 LPFD 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAG 167
I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 109 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 55 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 112
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCP- 168
Query: 142 NP----KISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
P KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL
Sbjct: 169 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 228
Query: 197 EIVS 200
EI S
Sbjct: 229 EIFS 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 192
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 198 IVS 200
I S
Sbjct: 253 IFS 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 121 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 120
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 198 IVS 200
I S
Sbjct: 238 IFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 70 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 127
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 128 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 184
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 185 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 244
Query: 198 IVS 200
I S
Sbjct: 245 IFS 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 7 IRLEKVDLAPFIR------LQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHEN 58
+RL+K+ F + +DG +K +++ S + +E EVA +AN+ H N
Sbjct: 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK--HPN 84
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
+V+ + +V DY L + + ++ F + + I L ++H
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+ ++HRDIK+ NI L ++ ++ DFG++++ +T ++ GT YL+PE
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICE 198
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
+ KSD+++ G +L E+ + + A +
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 80 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 137
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 194
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 195 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 254
Query: 198 IVS 200
I S
Sbjct: 255 IFS 257
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 43 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 157
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 158 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 195 LLEIVS 200
L EI +
Sbjct: 217 LWEIAT 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 129 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 63 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILMELMAGGDL 120
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237
Query: 198 IVS 200
I S
Sbjct: 238 IFS 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAG 167
I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
I+ KVL+ QG E E++ + + H +++KL+ I+V +Y N
Sbjct: 45 IINKKVLAKSDMQGRIE--REISYLRLLR--HPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ +R K + R I + Y H +VHRD+K N+LLD++ N K
Sbjct: 101 DYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGR 202
I+DFGLS + + ++ G+ Y APE ISG+L + DV+S GV+L ++ R
Sbjct: 153 IADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 209
Query: 203 TAVD 206
D
Sbjct: 210 LPFD 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHEN 58
+ ++G KV LA I G VA+K++ + ++ EV M +N H N
Sbjct: 20 LKTIGKGNFAKVKLARHI--LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--HPN 75
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
+VKL L+ +Y + L+ + + K R+I+ + Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV----QYCH 131
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL--APEY 176
Q +VHRD+K N+LLD + N KI+DFG S F V G L AP Y
Sbjct: 132 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT---------VGGKLDAFCGAPPY 179
Query: 177 AISGRLTRKS------DVYSFGVLLLEIVSGRTAVD 206
A K DV+S GV+L +VSG D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILMELMAGGDL 135
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 192
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 193 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 252
Query: 198 IVS 200
I S
Sbjct: 253 IFS 255
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHEN 58
+ ++G KV LA I G VA+K++ + ++ EV M +N H N
Sbjct: 17 LKTIGKGNFAKVKLARHI--LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--HPN 72
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
+VKL L+ +Y + L+ + + K R+I+ + Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV----QYCH 128
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
Q +VHRD+K N+LLD + N KI+DFG S F G+ Y APE
Sbjct: 129 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPELFQ 183
Query: 179 SGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQ 210
+ + DV+S GV+L +VSG ++ FD Q
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG--SLPFDGQ 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
I+ KVL+ QG E E++ + + H +++KL+ I+V +Y N
Sbjct: 46 IINKKVLAKSDMQGRIE--REISYLRLLR--HPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ +R K + R I + Y H +VHRD+K N+LLD++ N K
Sbjct: 102 DYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 153
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGR 202
I+DFGLS + + ++ G+ Y APE ISG+L + DV+S GV+L ++ R
Sbjct: 154 IADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRR 210
Query: 203 TAVD 206
D
Sbjct: 211 LPFD 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 178
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 179 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 198 IVS 200
I S
Sbjct: 239 IFS 241
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 41 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 98
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 99 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 155
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFG 192
+ ++F KI DFG+++ E R G + +++PE G T SDV+SFG
Sbjct: 156 VAEDFTVKIGDFGMTRDIXETDX---XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
Query: 193 VLLLEIVS 200
V+L EI +
Sbjct: 213 VVLWEIAT 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 50 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 164
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFG 192
+ ++F KI DFG+++ E R G + +++PE G T SDV+SFG
Sbjct: 165 VAEDFTVKIGDFGMTRDIXETDX---XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 193 VLLLEIVS 200
V+L EI +
Sbjct: 222 VVLWEIAT 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 90 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 147
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 148 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 204
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 205 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 264
Query: 198 IVS 200
I S
Sbjct: 265 IFS 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 23 GTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYM 79
G AVKV+S V+ K ++ + EV + ++ H N+ KL+ D LV +
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIXKLYEFFEDKGYFYLVGEVY 108
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD- 138
L ++ R +F II + G+ Y H + +VHRD+K N+LL+
Sbjct: 109 TGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLES 161
Query: 139 --QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
++ N +I DFGLS F E + ++ GT Y+APE + G K DV+S GV+L
Sbjct: 162 KSKDANIRIIDFGLSTHF-EASKKXKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILY 218
Query: 197 EIVSG 201
++SG
Sbjct: 219 ILLSG 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 178
Query: 139 QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ + + A + ++ PE + G T K+D +SFGVLL E
Sbjct: 179 PGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 238
Query: 198 IVS 200
I S
Sbjct: 239 IFS 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
I ++ SV + K + EVA + ++ H N++KL+ D LV +
Sbjct: 66 AIKIIRKTSVSTSSNSK-LLEEVAVLKLLD--HPNIMKLYDFFEDKRNYYLVMECYKGGE 122
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L ++ R KF II + G+ Y+H + ++VHRD+K N+LL+
Sbjct: 123 LFDEII----HRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKD 175
Query: 144 ---KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGLS +F EN + R+ GT Y+APE + + K DV+S GV+L +++
Sbjct: 176 ALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
Query: 201 G 201
G
Sbjct: 233 G 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
+ A+KVL + + +++ V V H +VKLH L+ D++ L
Sbjct: 55 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 114
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L + F + + + + L ++H +++RD+K NILLD+ + K
Sbjct: 115 FTRL----SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 167
Query: 145 ISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++DFGLSK E+ H + GT+ Y+APE T+ +D +SFGVL+ E+++G
Sbjct: 168 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 17 FIRLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I+ VAVK+L + E+E MSE+ ++ + H N+V L G C G +++
Sbjct: 63 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HMNIVNLLGACTIGGPTLVI 121
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----------------IGRGLAYIH 118
+Y L L ++R F IM + +G+A++
Sbjct: 122 TEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 178
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYA 177
+ + +HRD+ NILL KI DFGL++ ++ ++ A + ++APE
Sbjct: 179 SK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 235
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
+ T +SDV+S+G+ L E+ S
Sbjct: 236 FNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 17 FIRLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I+ VAVK+L + E+E MSE+ ++ + H N+V L G C G +++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HMNIVNLLGACTIGGPTLVI 128
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----------------IGRGLAYIH 118
+Y L L ++R F IM + +G+A++
Sbjct: 129 TEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 185
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYA 177
+ + +HRD+ NILL KI DFGL++ ++ ++ A + ++APE
Sbjct: 186 SK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI 242
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
+ T +SDV+S+G+ L E+ S
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 17 FIRLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I+ VAVK+L + E+E MSE+ ++ + H N+V L G C G +++
Sbjct: 47 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HMNIVNLLGACTIGGPTLVI 105
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----------------IGRGLAYIH 118
+Y L L ++R F IM + +G+A++
Sbjct: 106 TEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 162
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYA 177
+ + +HRD+ NILL KI DFGL++ ++ ++ A + ++APE
Sbjct: 163 SK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 219
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
+ T +SDV+S+G+ L E+ S
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFS 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 46 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 103
Query: 83 SLSQTL------LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
L L + A ++ I G+AY++ VHRD+ N +
Sbjct: 104 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 160
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 161 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 219
Query: 195 LLEIVS 200
L EI +
Sbjct: 220 LWEIAT 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
+ A+KVL + + +++ V V H +VKLH L+ D++ L
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 113
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L + F + + + + L ++H +++RD+K NILLD+ + K
Sbjct: 114 FTRL----SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 145 ISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++DFGLSK E+ H + GT+ Y+APE T+ +D +SFGVL+ E+++G
Sbjct: 167 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PE-NTTHISTRVAG 167
I RGL YIH +V+HRD+K SN+L++ + KI DFGL+++ PE + T T
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 25 IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
+ A+KVL + + +++ V V H +VKLH L+ D++ L
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 113
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
L + F + + + + L ++H +++RD+K NILLD+ + K
Sbjct: 114 FTRL----SKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 145 ISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++DFGLSK E+ H + GT+ Y+APE T+ +D +SFGVL+ E+++G
Sbjct: 167 LTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 17 FIRLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I+ VAVK+L + E+E MSE+ ++ + H N+V L G C G +++
Sbjct: 65 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HMNIVNLLGACTIGGPTLVI 123
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----------------IGRGLAYIH 118
+Y L L ++R F IM + +G+A++
Sbjct: 124 TEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 180
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYA 177
+ + +HRD+ NILL KI DFGL++ ++ ++ A + ++APE
Sbjct: 181 SK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 237
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
+ T +SDV+S+G+ L E+ S
Sbjct: 238 FNCVYTFESDVWSYGIFLWELFS 260
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 81 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 138
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 195
Query: 139 QNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ ++ + ++ PE + G T K+D +SFGVLL E
Sbjct: 196 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 255
Query: 198 IVS 200
I S
Sbjct: 256 IFS 258
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
++ + T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIM 107
Query: 77 DYMPNNSLSQTL------LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDI 130
+ M L L + A ++ I G+AY++ VHRD+
Sbjct: 108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDL 164
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ ++F KI DFG+++ E T + G L +++PE G T SDV
Sbjct: 165 AARNCMVAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI +
Sbjct: 224 WSFGVVLWEIAT 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 89
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 90 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 143
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 144 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 200 SGR 202
+G+
Sbjct: 204 TGQ 206
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 26 VAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VAVK L V S+Q E +F+ E ++ N H+N+V+ G + R ++ + M L
Sbjct: 104 VAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQSLPRFILLELMAGGDL 161
Query: 85 SQTLLGEEKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 138
L R ++ A +++ I G Y+ E H +HRDI N LL
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218
Query: 139 QNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI DFG+++ ++ + ++ PE + G T K+D +SFGVLL E
Sbjct: 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278
Query: 198 IVS 200
I S
Sbjct: 279 IFS 281
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 17 FIRLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I+ VAVK+L + E+E MSE+ ++ + H N+V L G C G +++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN-HMNIVNLLGACTIGGPTLVI 128
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----------------IGRGLAYIH 118
+Y L L ++R F IM + +G+A++
Sbjct: 129 TEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 185
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYA 177
+ + +HRD+ NILL KI DFGL++ ++ ++ A + ++APE
Sbjct: 186 SK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI 242
Query: 178 ISGRLTRKSDVYSFGVLLLEIVS 200
+ T +SDV+S+G+ L E+ S
Sbjct: 243 FNCVYTFESDVWSYGIFLWELFS 265
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 109
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 110 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 163
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 164 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 223
Query: 200 SGR 202
+G+
Sbjct: 224 TGQ 226
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 474 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 42 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 99
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHR++
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNL 156
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ +F KI DFG+++ E T + G L ++APE G T SD+
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM 215
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 19 RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDY 78
R G + A+KVL + + +++ +V H +VKLH L+ D+
Sbjct: 52 RPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDF 111
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
+ L L + F + + + + GL ++H +++RD+K NILLD
Sbjct: 112 LRGGDLFTRL----SKEVMFTEEDVKFYLAELALGLDHLH---SLGIIYRDLKPENILLD 164
Query: 139 QNFNPKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
+ + K++DFGLSK E H + GT+ Y+APE + +D +S+GVL+
Sbjct: 165 EEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMF 221
Query: 197 EIVSG 201
E+++G
Sbjct: 222 EMLTG 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIS 162
E++ + G+ Y+ E + VHRD+ N+LL KISDFGLSK EN
Sbjct: 473 ELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
T + + APE + + KSDV+SFGVL+ E S
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
I+ + T VAVK ++ + E+ EF++E + M CH ++V+L G G ++V
Sbjct: 43 IKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCH-HVVRLLGVVSKGQPTLVVM 100
Query: 77 DYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDI 130
+ M + L ++L E + +E+I I G+AY++ + VHR++
Sbjct: 101 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNL 157
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDV 188
N ++ +F KI DFG+++ E T + G L ++APE G T SD+
Sbjct: 158 AARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDM 216
Query: 189 YSFGVLLLEIVS 200
+SFGV+L EI S
Sbjct: 217 WSFGVVLWEITS 228
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 24 TIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
T VA+K ++ + E+ EF++E + M N CH ++V+L G G +++ + M
Sbjct: 43 TRVAIKTVNEAASMRERIEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 83 SLS---QTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNIL 136
L ++L E + + ++I G G+AY++ VHRD+ N
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCX 157
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVL 194
+ ++F KI DFG+++ E T + G L +++PE G T SDV+SFGV+
Sbjct: 158 VAEDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 195 LLEIVS 200
L EI +
Sbjct: 217 LWEIAT 222
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII---------M 469
Query: 85 SQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
LGE + + KF I+ + LAY+ + VHRDI N+L+
Sbjct: 470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 526
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
N K+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 527 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P V+ M +L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENP----VWIIMELCTL 94
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 151
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q+ I+A+KVL +E + E + E+ +++ H N+++++ D L+ +
Sbjct: 37 QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR--HPNILRMYNYFHDRKRIYLMLE 94
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ P L + L ++ +F + + + L Y HE V+HRDIK N+L+
Sbjct: 95 FAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 147
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFG S P + GTL YL PE K D++ GVL E
Sbjct: 148 GYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 198 IVSGRTAVD 206
+ G D
Sbjct: 205 FLVGMPPFD 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 15/183 (8%)
Query: 26 VAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L+V + Q + F +EV + H N++ L G P +V + +S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-LFMGYSTKPQLAIVTQWCEGSS 117
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L L E KF +I +G+ Y+H + ++HRD+K++NI L ++
Sbjct: 118 LYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTV 171
Query: 144 KISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + +H +++G++ ++APE + +SDVY+FG++L E++
Sbjct: 172 KIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 200 SGR 202
+G+
Sbjct: 232 TGQ 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII---------M 89
Query: 85 SQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
LGE + + KF I+ + LAY+ + VHRDI N+L+
Sbjct: 90 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 146
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
N K+ DFGLS+ ++T +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 147 NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 94
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 95 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 151
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 29/197 (14%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVAS---MANVNVCHENLVKLHGGCIDGPCRILVY 76
L+ TIV K + E + E++ + + + ++ + KLH L+
Sbjct: 90 LKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH----------LIL 138
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTS 133
DY+ L L +R +F E+ + +G L ++H + +++RDIK
Sbjct: 139 DYINGGELFTHL----SQRERF---TEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLE 188
Query: 134 NILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL--TRKSDVYSF 191
NILLD N + ++DFGLSK F + T + GT+ Y+AP+ G + D +S
Sbjct: 189 NILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248
Query: 192 GVLLLEIVSGRTAVDFD 208
GVL+ E+++G + D
Sbjct: 249 GVLMYELLTGASPFTVD 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q+ I+A+KVL +E + E + E+ +++ H N+++++ D L+ +
Sbjct: 38 QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR--HPNILRMYNYFHDRKRIYLMLE 95
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ P L + L ++ +F + + + L Y HE V+HRDIK N+L+
Sbjct: 96 FAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 148
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFG S P + + GTL YL PE K D++ GVL E
Sbjct: 149 GYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 198 IVSGRTAVD 206
+ G D
Sbjct: 206 FLVGMPPFD 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 29/193 (15%)
Query: 21 QDGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCI--DGPCRILVYD 77
Q+ A+K LS + Q + F+ E M +N H N++ L G + +G +L+
Sbjct: 47 QNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN--HPNVLALIGIMLPPEGLPHVLL-P 103
Query: 78 YMPNNSLSQTLLGEEKRRA-----KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
YM + L Q + ++ FG + + RG+ Y+ E+ VHRD+
Sbjct: 104 YMCHGDLLQFIRSPQRNPTVKDLISFG--------LQVARGMEYLAEQ---KFVHRDLAA 152
Query: 133 SNILLDQNFNPKISDFGLSKLFPEN-----TTHISTRVAGTLGYLAPEYAISGRLTRKSD 187
N +LD++F K++DFGL++ + H R+ + + A E + R T KSD
Sbjct: 153 RNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VKWTALESLQTYRFTTKSD 210
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL E+++
Sbjct: 211 VWSFGVLLWELLT 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 38 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 91
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 92 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 148
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 149 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 46 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 99
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 100 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 156
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 157 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT--THIS 162
EII+G L ++H + +V+RD+K NILLD++ + KI+DFG+ K EN +
Sbjct: 127 EIILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKT 176
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
GT Y+APE + + D +SFGVLL E++ G++
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 122
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 123 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 179
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 180 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 1 MASVGPIRLEKVDLAPFIRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHE 57
+ ++G KV LA I G VAVK++ + S +K F EV +N H
Sbjct: 19 LKTIGKGNFAKVKLARHILT--GKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLN--HP 73
Query: 58 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 112
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-----RQIVSAV-- 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G Y
Sbjct: 127 --QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA--FCGAPPYA 179
Query: 173 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 206
APE + + DV+S GV+L +VSG D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 43 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 96
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 97 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 153
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 154 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 21 QDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
Q+ I+A+KVL +E + E + E+ +++ H N+++++ D L+ +
Sbjct: 37 QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR--HPNILRMYNYFHDRKRIYLMLE 94
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ P L + L ++ +F + + + L Y HE V+HRDIK N+L+
Sbjct: 95 FAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLM 147
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFG S P + GTL YL PE K D++ GVL E
Sbjct: 148 GYKGELKIADFGWSVHAPSLR---RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 198 IVSGRTAVD 206
+ G D
Sbjct: 205 FLVGMPPFD 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+YMP + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+YMP + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
R + I + Y H + VVHRD+K N+LLD + N KI+DFGLS + + ++
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 164 RVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 206
G+ Y APE ISGRL + D++S GV+L ++ G D
Sbjct: 171 --CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H
Sbjct: 133 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--T 163
+ I RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H
Sbjct: 134 FLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 164 RVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
T Y APE ++ + T+ D++S G +L E++S R
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H +++KL+ I P I++ L ++ +++ G + ++II I
Sbjct: 68 HPHIIKLYD-VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAI----E 122
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 175
Y H +VHRD+K N+LLD N N KI+DFGLS + + ++ G+ Y APE
Sbjct: 123 YCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 177
Query: 176 YAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 206
I+G+L + DV+S G++L ++ GR D
Sbjct: 178 -VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 19 RLQDGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRIL-- 74
R DG I+ K L S + EK+ + SEV + + H N+V+ + ID L
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYYDRIIDRTNTTLYI 84
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ--PHVVHRDIKT 132
V +Y L+ + K R + ++ + L H V+HRD+K
Sbjct: 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP 144
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFG 192
+N+ LD N K+ DFGL+++ + + GT Y++PE KSD++S G
Sbjct: 145 ANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 193 VLLLEIVS 200
LL E+ +
Sbjct: 204 CLLYELCA 211
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
+A+K + + + E+A ++ H+N+V+ G + + + +P SLS
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGSFSENGFIKIFMEQVPGGSLS 93
Query: 86 QTLLGEEKRRAKFGWKARREIIMG-----IGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
L R+K+G E +G I GL Y+H+ +VHRDIK N+L++
Sbjct: 94 ALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTY 144
Query: 141 FNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR--LTRKSDVYSFGVLLLE 197
KISDFG SK + GTL Y+APE G + +D++S G ++E
Sbjct: 145 SGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 198 IVSGRTAVDFDVQLGE 213
+ +G+ +LGE
Sbjct: 204 MATGKPPF---YELGE 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ M +L
Sbjct: 44 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII----MELCTL 97
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + R+ + + LAY+ + VHRDI N+L+ N K
Sbjct: 98 GELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVK 154
Query: 145 ISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 155 LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 85
+A+K + + + E+A ++ H+N+V+ G + + + +P SLS
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107
Query: 86 QTLLGEEKRRAKFGWKARREIIMG-----IGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
L R+K+G E +G I GL Y+H+ +VHRDIK N+L++
Sbjct: 108 ALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTY 158
Query: 141 FNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR--LTRKSDVYSFGVLLLE 197
KISDFG SK + GTL Y+APE G + +D++S G ++E
Sbjct: 159 SGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 198 IVSGRTAVDFDVQLGE 213
+ +G+ +LGE
Sbjct: 218 MATGKPPF---YELGE 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT--THIS 162
EII+G L ++H + +V+RD+K NILLD++ + KI+DFG+ K EN +
Sbjct: 126 EIILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKT 175
Query: 163 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
GT Y+APE + + D +SFGVLL E++ G++
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 26 VAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VAVK+L V E+ F +EVA + H N++ L G + +V + +S
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTR--HVNIL-LFMGYMTKDNLAIVTQWCEGSS 117
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L + L +E KF +I +G+ Y+H + +++HRD+K++NI L +
Sbjct: 118 LYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTV 171
Query: 144 KISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL+ + + + + G++ ++APE + + +SDVYS+G++L E++
Sbjct: 172 KIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
Query: 200 SG 201
+G
Sbjct: 232 TG 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 25 IVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
IVA+KVL +E + E + E+ A+++ H N+++L+ D L+ +Y P
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLH--HPNILRLYNYFYDRRRIYLILEYAPR 107
Query: 82 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
L + L ++ F + I+ + L Y H + V+HRDIK N+LL
Sbjct: 108 GELYKEL----QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKG 160
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVS 200
KI+DFG S P + GTL YL PE I GR+ K D++ GVL E++
Sbjct: 161 ELKIADFGWSVHAPSLR---RKTMCGTLDYLPPE-MIEGRMHNEKVDLWCIGVLCYELLV 216
Query: 201 G 201
G
Sbjct: 217 G 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 2 ASVGPIRLEKVDLAPFIRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVK 61
A V +RL+K D +R+ +V ++ Q EK + ++ H LV
Sbjct: 66 AKVLLVRLKKTDRIYAMRVVKKELVNDDE-DIDWVQTEKHVFEQASN-------HPFLVG 117
Query: 62 LHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 120
LH C R+ V +Y+ L + +R+ K + R I L Y+HE
Sbjct: 118 LHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNYLHER 172
Query: 121 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+APE
Sbjct: 173 ---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEILR 226
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
D ++ GVL+ E+++GR+ D
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 56 HENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 114
H LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 115 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYL 172
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+
Sbjct: 120 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 173
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
APE D ++ GVL+ E+++GR+ D
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
R + I + Y H + VVHRD+K N+LLD + N KI+DFGLS + +
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLR 168
Query: 164 RVAGTLGYLAPEYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 206
G+ Y APE ISGRL + D++S GV+L ++ G D
Sbjct: 169 DSCGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 88 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 142 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 201 GRTAV 205
GR +
Sbjct: 199 GRYPI 203
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 56 HENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 114
H LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 80 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 115 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYL 172
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+
Sbjct: 135 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 188
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
APE D ++ GVL+ E+++GR+ D
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 23/195 (11%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCID-GPCRI----- 73
++ G + A+KV+ V + E+E E+ +M H N+ +G I P +
Sbjct: 46 VKTGQLAAIKVMDVTGDE-EEEIKQEI-NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103
Query: 74 LVYDYMPNNSLSQTLLGEEKRRAKFGWKAR--REIIMGIGRGLAYIHEEIQPHVVHRDIK 131
LV ++ S++ + + K W A REI+ RGL+++H Q V+HRDIK
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL----RGLSHLH---QHKVIHRDIK 156
Query: 132 TSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-----SGRLTRKS 186
N+LL +N K+ DFG+S +T + GT ++APE KS
Sbjct: 157 GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKS 215
Query: 187 DVYSFGVLLLEIVSG 201
D++S G+ +E+ G
Sbjct: 216 DLWSLGITAIEMAEG 230
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 20 LQDGTIVAVK---VLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
L DG VA+K + + + + + E+ + +N H N++K + I+ +V
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN--HPNVIKYYASFIEDNELNIVL 111
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
+ LS+ + +K++ + + + + L ++H V+HRDIK +N+
Sbjct: 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVF 168
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
+ K+ D GL + F TT + V GT Y++PE KSD++S G LL
Sbjct: 169 ITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLY 227
Query: 197 EIVSGRTAVDFDVQLGEYHLVDKVRSIN 224
E+ + ++ D ++ Y L K+ +
Sbjct: 228 EMAALQSPFYGD-KMNLYSLCKKIEQCD 254
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 88 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 142 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 201 GRTAV 205
GR +
Sbjct: 199 GRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 88 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 142 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 201 GRTAV 205
GR +
Sbjct: 199 GRYPI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 34 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 90
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 91 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 144
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 145 GEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 201
Query: 201 GR 202
GR
Sbjct: 202 GR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 88 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 142 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 201 GRTAV 205
GR +
Sbjct: 199 GRYPI 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTH 160
R ++ I L Y+HE ++HRD+K NI+L Q KI D G +K +
Sbjct: 125 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 179
Query: 161 ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 215
+ T GTL YLAPE + T D +SFG L E ++G + Q ++H
Sbjct: 180 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 88 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 142 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 201 GRTAV 205
GR +
Sbjct: 199 GRYPI 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTH 160
R ++ I L Y+HE ++HRD+K NI+L Q KI D G +K +
Sbjct: 124 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 178
Query: 161 ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 215
+ T GTL YLAPE + T D +SFG L E ++G + Q ++H
Sbjct: 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 58 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 114
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 115 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 168
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 169 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 225
Query: 201 GRTAV 205
GR +
Sbjct: 226 GRYPI 230
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E ++ SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 56 HENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 114
H LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 115 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYL 172
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+
Sbjct: 124 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 177
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
APE D ++ GVL+ E+++GR+ D
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 50 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 106
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 107 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 160
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 161 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 217
Query: 201 GRTAV 205
GR +
Sbjct: 218 GRYPI 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 143
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 143
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMP 80
G ++A K++ +E K + + E+ + N + +V +G DG I + ++M
Sbjct: 93 GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMD 149
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
SL Q L K+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++
Sbjct: 150 GGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSR 203
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
K+ DFG+S ++ ++ GT Y++PE + +SD++S G+ L+E+
Sbjct: 204 GEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 260
Query: 201 GRTAV 205
GR +
Sbjct: 261 GRYPI 265
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI---STRVA 166
+ RG+ ++ +HRD+ NILL +N KI DFGL++ +N ++ TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 167 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
L ++APE + KSDV+S+GVLL EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 128
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 129 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ +
Sbjct: 41 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII---------M 89
Query: 85 SQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
LGE + + KF I+ + LAY+ + VHRDI N+L+
Sbjct: 90 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSA 146
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 147 TDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 122
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 123 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 144
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 144
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 147
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 148 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 147
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 148 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 154
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 155 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ ++ A L ++APE T +SD
Sbjct: 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 269
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 270 VWSFGVLLWEIFS 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 151
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 152 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 144
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 123
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 124 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 117
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ ++ A L ++APE T +SD
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 144
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 121
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 122 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 146
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 149
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 150 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H VKL+ D Y N L + + ++ F R I L
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALE 124
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAP 174
Y+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++P
Sbjct: 125 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 175 EYAISGRLTRKSDVYSFGVLLLEIVSG 201
E + SD+++ G ++ ++V+G
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 27 AVKVLSVESKQGEKEFMSEVASMANVNVC--HENLVKLHGGCIDGPCRILVYDYMPNNSL 84
AVK++S K+ E E+ ++ +C H N+VKLH D LV + + L
Sbjct: 40 AVKIIS---KRMEANTQKEITAL---KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL---DQNF 141
+ + K++ F I+ + ++++H+ VVHRD+K N+L + N
Sbjct: 94 FERI----KKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNL 146
Query: 142 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
KI DFG ++L P + + T TL Y APE D++S GV+L ++SG
Sbjct: 147 EIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205
Query: 202 R 202
+
Sbjct: 206 Q 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 118
Query: 83 SLSQTLLGEEKRRAKFGWKARREII-------------MGIGRGLAYIHEEIQPHVVHRD 129
+LS L KR +K ++ + +G+ ++ +HRD
Sbjct: 119 NLSTYL--RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDV 188
+ NILL + KI DFGL++ ++ + A L ++APE T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 189 YSFGVLLLEIVS 200
+SFGVLL EI S
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
I + G IVA+K + VES +E + E++ M + H +VK +G +V +
Sbjct: 49 IHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPH--VVKYYGSYFKNTDLWIVME 104
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y S+S + R I+ +GL Y+H + +HRDIK NILL
Sbjct: 105 YCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILL 158
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
+ + K++DFG++ T ++ R V GT ++APE +D++S G+
Sbjct: 159 NTEGHAKLADFGVAGQL---TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITA 215
Query: 196 LEIVSGR 202
+E+ G+
Sbjct: 216 IEMAEGK 222
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 119
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 120 NLSTYL--RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 174
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ ++ A L ++APE T +SD
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 234
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 235 VWSFGVLLWEIFS 247
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
++ + I + L Y+ E + V+HRD+K SNILLD+ K+ DFG+S ++ R
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDR 183
Query: 165 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGR-----TAVDFDV 209
AG Y+APE T+ ++DV+S G+ L+E+ +G+ DF+V
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 55 CHENLV-KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 113
C + V K +G + G ++ +Y+ S L R F ++ I +G
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKG 132
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 173
L Y+H E + +HRDIK +N+LL + + K++DFG++ + +T V GT ++A
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 188
Query: 174 PEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
PE K+D++S G+ +E+ G
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
++ G A+K+L + KE ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF--LVKLEFSFKDNSNLYMVM 120
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
+Y P + L +R +F R I Y+H +++RD+K N++
Sbjct: 121 EYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
+DQ K++DFGL+K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 IDQQGYIKVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 197 EIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 117
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ + A L ++APE T +SD
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 232
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 233 VWSFGVLLWEIFS 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K + S ++F+ E +M + H ++VKL G + P I+ +
Sbjct: 421 VAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVITENPVWII---------M 469
Query: 85 SQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
LGE + + KF I+ + LAY+ + VHRDI N+L+
Sbjct: 470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSA 526
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+ DFGLS+ ++T + +++ + ++APE R T SDV+ FGV + EI+
Sbjct: 527 TDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 108
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ + A L ++APE T +SD
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEV--ASMANVNVC-----HENLVKLHGGCIDGPCRILV 75
G AVK++ V +++ E + EV A+ ++ H +++ L LV
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+D M L L + K R I+ + ++++H ++VHRD+K NI
Sbjct: 179 FDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 136 LLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR------LTRKSDV 188
LLD N ++SDFG S L P + GT GYLAPE ++ D+
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 189 YSFGVLLLEIVSG 201
++ GV+L +++G
Sbjct: 289 WACGVILFTLLAG 301
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
EII+G L ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S
Sbjct: 300 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
GT GY+APE G +D +S G +L +++ G +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
EII+G L ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S
Sbjct: 300 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
GT GY+APE G +D +S G +L +++ G +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
EII+G L ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S
Sbjct: 299 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 350
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
GT GY+APE G +D +S G +L +++ G +
Sbjct: 351 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
EII+G L ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S
Sbjct: 300 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
GT GY+APE G +D +S G +L +++ G +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 117
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 118 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLF---PENTTHISTRVAGTLGYLAPEYAISGRLTRK 185
D+ NILL + KI DFGL++ P+ R+ L ++APE T +
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQ 230
Query: 186 SDVYSFGVLLLEIVS 200
SDV+SFGVLL EI S
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 25 IVAVKVLSVESKQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
+VA+K ++ E+ +G++ M +E+A + + H N+V L G L+ +
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGE 102
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN 140
L ++ + + + +I + + Y+H+ +VHRD+K N+L LD++
Sbjct: 103 LFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK+ E+ + + GT GY+APE ++ D +S GV+ ++
Sbjct: 156 SKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 201 G 201
G
Sbjct: 214 G 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 117
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMG----------IGRGLAYIHEEIQPHVVHRDIKT 132
+LS L KR +K + + + +G+ ++ +HRD+
Sbjct: 118 NLSTYL--RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAA 172
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSF 191
NILL + KI DFGL++ ++ ++ A L ++APE T +SDV+SF
Sbjct: 173 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
Query: 192 GVLLLEIVS 200
GVLL EI S
Sbjct: 233 GVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIG-HHLNVVNLLGACTKPGGPLMVIV-EFCKFG 117
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMG----------IGRGLAYIHEEIQPHVVHRDIKT 132
+LS L KR +K + + + +G+ ++ +HRD+
Sbjct: 118 NLSTYL--RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAA 172
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSF 191
NILL + KI DFGL++ ++ ++ A L ++APE T +SDV+SF
Sbjct: 173 RNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
Query: 192 GVLLLEIVS 200
GVLL EI S
Sbjct: 233 GVLLWEIFS 241
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + T GT YL
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 316
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFG 108
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ ++ A L ++APE T +SD
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + T GT YL
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 319
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFG 108
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ ++ A L ++APE T +SD
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
I+ I +GL Y+H E + +HRDIK +N+LL ++ K++DFG++ + +T V
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
GT ++APE K+D++S G+ +E+ G
Sbjct: 166 -GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 74 LVYDYMPNNSL---SQTLLGEEKRRAKF-GWKARREIIMGIGRGLAYIHEEIQPHVVHRD 129
++Y+YM N+S+ + +K F + + II + +YIH E ++ HRD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI--SGRLTRKSD 187
+K SNIL+D+N K+SDFG S+ + S GT ++ PE+ S K D
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVD 234
Query: 188 VYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMK 226
++S G+ L V V F +++ L + +R+ N++
Sbjct: 235 IWSLGICLY--VMFYNVVPFSLKISLVELFNNIRTKNIE 271
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 25 IVAVKVLSVESKQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
+VA+K ++ E+ +G++ M +E+A + + H N+V L G L+ +
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGE 102
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN 140
L ++ + + + +I + + Y+H+ +VHRD+K N+L LD++
Sbjct: 103 LFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK+ E+ + + GT GY+APE ++ D +S GV+ ++
Sbjct: 156 SKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 201 G 201
G
Sbjct: 214 G 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 25 IVAVKVLSVESKQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
+VA+K ++ E+ +G++ M +E+A + + H N+V L G L+ +
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGE 102
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN 140
L ++ + + + +I + + Y+H+ +VHRD+K N+L LD++
Sbjct: 103 LFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK+ E+ + + GT GY+APE ++ D +S GV+ ++
Sbjct: 156 SKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 201 G 201
G
Sbjct: 214 G 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGY 189
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 46/215 (21%)
Query: 43 MSEVASMANVNVCHENLVKLHGGCID-------------GPCRILVYDYMPNNSLSQTLL 89
+SEV +A++N H+ +V+ + ++ + +Y N +L +
Sbjct: 50 LSEVMLLASLN--HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH 107
Query: 90 GEE--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 147
E ++R ++ W+ R+I+ L+YIH + ++HRD+K NI +D++ N KI D
Sbjct: 108 SENLNQQRDEY-WRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159
Query: 148 FGLSK--------------LFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFG 192
FGL+K P ++ ++++ + GT Y+A E +G K D+YS G
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 193 VLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMKL 227
++ E++ F + +++ K+RS++++
Sbjct: 219 IIFFEMI-----YPFSTGMERVNILKKLRSVSIEF 248
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 46/215 (21%)
Query: 43 MSEVASMANVNVCHENLVKLHGGCID-------------GPCRILVYDYMPNNSLSQTLL 89
+SEV +A++N H+ +V+ + ++ + +Y N +L +
Sbjct: 50 LSEVMLLASLN--HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH 107
Query: 90 GEE--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 147
E ++R ++ W+ R+I+ L+YIH + ++HRD+K NI +D++ N KI D
Sbjct: 108 SENLNQQRDEY-WRLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159
Query: 148 FGLSK--------------LFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFG 192
FGL+K P ++ ++++ + GT Y+A E +G K D+YS G
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLG 218
Query: 193 VLLLEIVSGRTAVDFDVQLGEYHLVDKVRSINMKL 227
++ E++ F + +++ K+RS++++
Sbjct: 219 IIFFEMI-----YPFSTGMERVNILKKLRSVSIEF 248
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTR 164
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ E T +++TR
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTR 164
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ E T +++TR
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 26 VAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L +++ +EF E +M + H N+V L G +++ Y + L
Sbjct: 59 VAIKTLKDKAEGPLREEFRHE--AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 85 SQTLL----------GEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+ L+ ++ R K + ++ I G+ Y+ HVVH+D+ T
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLAT 173
Query: 133 SNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSF 191
N+L+ N KISD GL + ++ + + + ++APE + G+ + SD++S+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 192 GVLLLEIVS 200
GV+L E+ S
Sbjct: 234 GVVLWEVFS 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y P + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ K++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 23 GTIVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G IVA+K S + K +K M E+ + + HENLV L C LV++++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--HENLVNLLEVCKKKKRWYLVFEFVD 107
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
+ L L + K +II GIG + H +++HRDIK NIL+ Q+
Sbjct: 108 HTILDDLELFPNGLDYQVVQKYLFQIINGIG----FCHSH---NIIHRDIKPENILVSQS 160
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIV 199
K+ DFG ++ VA T Y APE + + + DV++ G L+ E+
Sbjct: 161 GVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
Query: 200 SGRTAVDFDVQLGE-YHLV 217
G D + + YH++
Sbjct: 220 MGEPLFPGDSDIDQLYHIM 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 179
Query: 166 AG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
AG T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 179
Query: 166 AG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
AG T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGY 187
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 49 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 105
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 106 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 158
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 159 LIDQQGYIQVTDFGFAKRVKGRTWTL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 214
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 215 YEMAAGYPPFFADQPIQIYEKIVSGKVR 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 35 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE-- 92
SK ++F E+ + + H N++ L G C L +Y P+ +L L
Sbjct: 55 SKDDHRDFAGELEVLCKLGH-HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 113
Query: 93 ----------KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ + + RG+ Y+ Q +HRD+ NIL+ +N+
Sbjct: 114 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 170
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFGLS+ V T+G ++A E T SDV+S+GVLL E
Sbjct: 171 AKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
Query: 198 IVS 200
IVS
Sbjct: 224 IVS 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 26 VAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L +++ +EF E +M + H N+V L G +++ Y + L
Sbjct: 42 VAIKTLKDKAEGPLREEFRHE--AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 85 SQTLL----------GEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
+ L+ ++ R K + ++ I G+ Y+ HVVH+D+ T
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLAT 156
Query: 133 SNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSF 191
N+L+ N KISD GL + ++ + + + ++APE + G+ + SD++S+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 192 GVLLLEIVS 200
GV+L E+ S
Sbjct: 217 GVVLWEVFS 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGY 187
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS-- 179
Q H VHRDIK NIL+D N + +++DFG E+ T S+ GT Y++PE +
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 180 ---GRLTRKSDVYSFGVLLLEIVSGRT 203
GR + D +S GV + E++ G T
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 MIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 187
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 129 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 181
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 137 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 189
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 35 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE-- 92
SK ++F E+ + + H N++ L G C L +Y P+ +L L
Sbjct: 65 SKDDHRDFAGELEVLCKLGH-HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 123
Query: 93 ----------KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ + + RG+ Y+ Q +HRD+ NIL+ +N+
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFGLS+ V T+G ++A E T SDV+S+GVLL E
Sbjct: 181 AKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
Query: 198 IVS 200
IVS
Sbjct: 234 IVS 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
I+ I +GL Y+H E + +HRDIK +N+LL ++ K++DFG++ + +T V
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
GT ++APE K+D++S G+ +E+ G
Sbjct: 186 -GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 140 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 192
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 184
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N++ L DG LV + M L +L R+ F + ++ IG+ +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVE 135
Query: 116 YIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSK-LFPENTTHISTRVAGTLG 170
Y+H + VVHRD+K SNIL +D++ NP +I DFG +K L EN ++ T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTAN 190
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
++APE D++S G+LL +++G T
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 141 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGY 193
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
++ G A+K+L + KE ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF--LVKLEFSFKDNSNLYMVM 120
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
+Y P + L +R +F R I Y+H +++RD+K N++
Sbjct: 121 EYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
+DQ +++DFGL+K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 IDQQGYIQVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 197 EIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 14/102 (13%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 175
Query: 166 AG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
AG T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 LIDQQGYIQVTDFGFAKRVKGRTWTL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 184
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP +++ ++
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFG 108
Query: 83 SLSQTLLGEEKRRAKFGWKARREII--------------MGIGRGLAYIHEEIQPHVVHR 128
+LS L KR +K E + + +G+ ++ +HR
Sbjct: 109 NLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 163
Query: 129 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSD 187
D+ NILL + KI DFGL++ ++ + A L ++APE T +SD
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSD 223
Query: 188 VYSFGVLLLEIVS 200
V+SFGVLL EI S
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 184
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y P + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 188
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLG 170
+ L ++H V+HRDIK+ NILL + + K++DFG +++ PE + + + GT
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPY 181
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
++APE K D++S G++ +E++ G
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 141 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 193
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 194
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGX 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 194
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 135 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 187
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 178
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 142 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 194
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 178
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 127 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 179
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 202
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 127 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 179
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 153 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 205
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 16/108 (14%)
Query: 106 IIMGIGRGLAYIHEEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH 160
I++ I GLA++H EI +P + HRD+K+ NIL+ +N I+D GL+ + ++T
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 161 I----STRVAGTLGYLAPEYAISGRLT------RKSDVYSFGVLLLEI 198
+ + RV GT Y+APE ++ D+++FG++L E+
Sbjct: 170 LDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 188
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 MIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 126 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 178
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 20/180 (11%)
Query: 42 FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE--KRRAKFG 99
F E MA N +V+L D +V +YMP L + + ++ AKF
Sbjct: 122 FWEERDIMAFAN--SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF- 178
Query: 100 WKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENT 158
E+++ L IH ++HRD+K N+LLD++ + K++DFG K+
Sbjct: 179 --YTAEVVLA----LDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM 229
Query: 159 THISTRVAGTLGYLAPEYAIS----GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 214
H T V GT Y++PE S G R+ D +S GV L E++ G T D +G Y
Sbjct: 230 VHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTY 288
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 202
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 149 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 201
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 188
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 149 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 201
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 204
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AGT G++
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE + D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 128 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 180
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 16/108 (14%)
Query: 106 IIMGIGRGLAYIHEEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH 160
I++ I GLA++H EI +P + HRD+K+ NIL+ +N I+D GL+ + ++T
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 161 I----STRVAGTLGYLAPEYAISGRLT------RKSDVYSFGVLLLEI 198
+ + RV GT Y+APE ++ D+++FG++L E+
Sbjct: 170 LDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N++ L DG LV + M L +L R+ F + ++ IG+ +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVE 135
Query: 116 YIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSK-LFPENTTHISTRVAGTLG 170
Y+H + VVHRD+K SNIL +D++ NP +I DFG +K L EN ++ T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTAN 190
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
++APE D++S G+LL +++G T
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 232
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AGT G++
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE + D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 132 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGY 184
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AGT G++
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE + D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AGT G++
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE + D ++ GV L E+++ R
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK---LFPENTTH 160
R + + RGL Y+H V+HRD+K SN+L+++N KI DFG+++ P +
Sbjct: 162 RYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 161 ISTRVAGTLGYLAPEYAIS-GRLTRKSDVYSFGVLLLEIVSGR 202
T T Y APE +S T+ D++S G + E+++ R
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 136 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGY 188
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLG 170
+ L ++H V+HRDIK+ NILL + + K++DFG +++ PE + + + GT
Sbjct: 128 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPY 182
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
++APE K D++S G++ +E++ G
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ + ++ H+++V HG D +V + SL L KRR
Sbjct: 57 KPHQREKMSMEISI-HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRR 111
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
+ T + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 169 YDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLG 170
+ L ++H V+HRDIK+ NILL + + K++DFG +++ PE + + + GT
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPY 181
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
++APE K D++S G++ +E++ G
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 104
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 105 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 158
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK---LFPENTTH 160
R + + RGL Y+H V+HRD+K SN+L+++N KI DFG+++ P +
Sbjct: 161 RYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 161 ISTRVAGTLGYLAPEYAIS-GRLTRKSDVYSFGVLLLEIVSGR 202
T T Y APE +S T+ D++S G + E+++ R
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ + ++ H+++V HG D +V + SL L KRR
Sbjct: 57 KPHQREKMSMEISI-HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRR 111
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
+ T + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 169 YDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 106
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 107 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 160
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ + ++ H+++V HG D +V + SL L KRR
Sbjct: 61 KPHQREKMSMEISI-HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRR 115
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 172
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
+ T + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 173 YDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 48 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGXL 104
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 105 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 158
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLG 170
+ L ++H V+HRDIK+ NILL + + K++DFG +++ PE + + + GT
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPY 181
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
++APE K D++S G++ +E++ G
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 16/108 (14%)
Query: 106 IIMGIGRGLAYIHEEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH 160
I++ I GLA++H EI +P + HRD+K+ NIL+ +N I+D GL+ + ++T
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 161 I----STRVAGTLGYLAPEYAISGRLT------RKSDVYSFGVLLLEI 198
+ + RV GT Y+APE ++ D+++FG++L E+
Sbjct: 199 LDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 159
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 110
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 111 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 164
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGXL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNN 82
VAVK+L + E + MSE+ + ++ H N+V L G C GP ++V ++
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFG 119
Query: 83 SLSQTLLGEEKRRAKFGWKAR---REII---------MGIGRGLAYIHEEIQPHVVHRDI 130
+LS L KR +K ++ + + +G+ ++ +HRD+
Sbjct: 120 NLSTYL--RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDL 174
Query: 131 KTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVY 189
NILL + KI DFGL++ ++ + A L ++APE T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 190 SFGVLLLEIVS 200
SFGVLL EI S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 57 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 113
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 114 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 167
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 72 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 128
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 129 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 182
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS- 83
VA+K +++E Q E + E+ +M+ + H N+V + + LV + S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCH--HPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 84 ---LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
+ + E + I+ + GL Y+H+ Q +HRD+K NILL ++
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 141 FNPKISDFGLSKLFPENTTHISTRV----AGTLGYLAPEYAISGR-LTRKSDVYSFGVLL 195
+ +I+DFG+S +V GT ++APE R K+D++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 196 LEIVSG 201
+E+ +G
Sbjct: 213 IELATG 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 107
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 108 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 161
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 106
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 107 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 160
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 106
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 107 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 160
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 22 DGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
D T+VAVK K +F+ E + + H N+V+L G C +V + +
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRLIGVCTQKQPIYIVMELVQ 195
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
T L E R + K +++ G+ Y+ + +HRD+ N L+ +
Sbjct: 196 GGDFL-TFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEK 249
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
KISDFG+S+ E + G + + APE GR + +SDV+SFG+LL
Sbjct: 250 NVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 197 EIVS 200
E S
Sbjct: 307 ETFS 310
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 41 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 97
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 98 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 151
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 106
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 107 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 160
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+P + L +R +F R I Y+H
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 204
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 110
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 111 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 164
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 110
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 111 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 164
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 159
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 109
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 110 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 163
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 218 DKV 220
+V
Sbjct: 241 PEV 243
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 15/186 (8%)
Query: 26 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS- 83
VA+K +++E Q E + E+ +M+ + H N+V + + LV + S
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCH--HPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 84 ---LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
+ + E + I+ + GL Y+H+ Q +HRD+K NILL ++
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 141 FNPKISDFGLSKLFPENTTHISTRV----AGTLGYLAPEYAISGR-LTRKSDVYSFGVLL 195
+ +I+DFG+S +V GT ++APE R K+D++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 196 LEIVSG 201
+E+ +G
Sbjct: 218 IELATG 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 218 DKV 220
+V
Sbjct: 241 PEV 243
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 218 DKV 220
+V
Sbjct: 241 PEV 243
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL + +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 179
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 218 DKV 220
+V
Sbjct: 240 PEV 242
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 MIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 22 DGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
D T+VAVK K +F+ E + + H N+V+L G C +V + +
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRLIGVCTQKQPIYIVMELVQ 195
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
T L E R + K +++ G+ Y+ + +HRD+ N L+ +
Sbjct: 196 GGDFL-TFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEK 249
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
KISDFG+S+ E + G + + APE GR + +SDV+SFG+LL
Sbjct: 250 NVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 197 EIVS 200
E S
Sbjct: 307 ETFS 310
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN L KL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 MIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN L KL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 MIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI D+GL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ ++ H+++V HG D +V + SL L KRR
Sbjct: 55 KPHQREKMSMEISIHR-SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL----LELHKRR 109
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV- 165
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
E + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 166 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 186
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 218 DKV 220
+V
Sbjct: 247 PEV 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G A K + + ++ E+ +M+ + H LV LH D +++Y++M
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHDAFEDDNEMVMIYEFMSGG 239
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL--DQN 140
L + + E + ++ E + + +GL ++HE + VH D+K NI+ ++
Sbjct: 240 ELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRS 293
Query: 141 FNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+ DFGL+ L P+ + ++T GT + APE A + +D++S GVL ++
Sbjct: 294 NELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350
Query: 200 SG 201
SG
Sbjct: 351 SG 352
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T
Sbjct: 159 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGY 211
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ D++S G ++ E+++GRT
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 25 IVAVKVLSVESKQGEKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
+VA+K ++ ++ +G++ M +E+A + + H N+V L G L+ +
Sbjct: 45 LVAIKCIAKKALEGKEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGE 102
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN 140
L ++ + + + +I + + Y+H+ +VHRD+K N+L LD++
Sbjct: 103 LFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDED 155
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
ISDFGLSK+ E+ + + GT GY+APE ++ D +S GV+ ++
Sbjct: 156 SKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 201 G 201
G
Sbjct: 214 G 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G A K + + ++ E+ +M+ + H LV LH D +++Y++M
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHDAFEDDNEMVMIYEFMSGG 133
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL--DQN 140
L + + E + ++ E + + +GL ++HE + VH D+K NI+ ++
Sbjct: 134 ELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRS 187
Query: 141 FNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
K+ DFGL+ L P+ + ++T GT + APE A + +D++S GVL ++
Sbjct: 188 NELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 244
Query: 200 SG 201
SG
Sbjct: 245 SG 246
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 174
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 126 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 179
Query: 175 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 201
E I + ++ D++S GV++ +++G
Sbjct: 180 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N++ L DG +V + M L +L R+ F + ++ I + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVE 130
Query: 116 YIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSK-LFPENTTHISTRVAGTLG 170
Y+H + VVHRD+K SNIL +D++ NP +I DFG +K L EN ++ T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTAN 185
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
++APE D++S GVLL +++G T
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR-VAGT 168
I GL ++H+ +++RD+K N++LD + KI+DFG+ K ++TR GT
Sbjct: 129 ISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGT 183
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
Y+APE + D +++GVLL E+++G+ D
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ + ++ H+++V HG D +V + ++LL KRR
Sbjct: 81 KPHQREKMSMEISI-HRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRR 135
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV- 191
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
E + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 192 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 36 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 95
K ++E MS S+ + ++ H+++V HG D +V + ++LL KRR
Sbjct: 79 KPHQREKMSMEISI-HRSLAHQHVVGFHGFFEDNDFVFVVLEL----CRRRSLLELHKRR 133
Query: 96 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 155
R + I G Y+H V+HRD+K N+ L+++ KI DFGL+
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV- 189
Query: 156 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 206
E + GT Y+APE + + DV+S G ++ ++ G+ +
Sbjct: 190 EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
I+ I +GL Y+H E + +HRDIK +N+LL ++ K++DFG++ +T
Sbjct: 124 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXF 179
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
GT ++APE K+D++S G+ +E+ G
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 44 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 100
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 101 LDYV---REHKDNIGSQYLLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 154
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFGL+KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
I+ I +GL Y+H E + +HRDIK +N+LL ++ K++DFG++ +T
Sbjct: 109 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXF 164
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
GT ++APE K+D++S G+ +E+ G
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN L KL D +V
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTKLEFSFKDNSNLYMV 120
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y P + L +R +F R I Y+H +++RD+K N+
Sbjct: 121 MEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 173
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
++DQ K++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 174 MIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 230 YEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +
Sbjct: 153 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 202
Query: 166 AG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
G T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 319
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 218 DKV 220
+V
Sbjct: 380 PEV 382
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 35 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE-- 92
SK ++F E+ + + H N++ L G C L +Y P+ +L L
Sbjct: 62 SKDDHRDFAGELEVLCKLGH-HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 120
Query: 93 ----------KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
+ + + RG+ Y+ Q +HR++ NIL+ +N+
Sbjct: 121 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYV 177
Query: 143 PKISDFGLSKLFPENTTHISTRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLE 197
KI+DFGLS+ V T+G ++A E T SDV+S+GVLL E
Sbjct: 178 AKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
Query: 198 IVS 200
IVS
Sbjct: 231 IVS 233
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT YL
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 175
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT YL
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYL 177
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 305
Query: 170 GYLAPEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLV 217
YLAPE +S R D +S GV+L +SG RT V Q+ G+Y+ +
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 218 DKV 220
+V
Sbjct: 366 PEV 368
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +
Sbjct: 150 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM 199
Query: 166 AG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
G T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 174
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 192
Query: 175 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 201
E I + ++ D++S GV++ +++G
Sbjct: 193 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT YL
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYL 178
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + AGT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----AGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT YL
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYL 176
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
APE R D + GV++ E++ GR
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
I+ I +GL Y+H E + +HRDIK +N+LL + + K++DFG++ +T
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXF 176
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
GT ++APE K+D++S G+ +E+ G
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 35 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKR 94
S + KE + E MA+V+ H + +L G C+ + L+ MP L + +
Sbjct: 91 SPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REH 144
Query: 95 RAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF 154
+ G + + I +G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL
Sbjct: 145 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
Query: 155 -PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 202 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G IVA+K L E + + E++ + ++ H N+V L C LV+++M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELH--HPNIVSLIDVIHSERCLTLVFEFME 102
Query: 81 NN---SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ L + G + + K + + RG+A+ H Q ++HRD+K N+L+
Sbjct: 103 KDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCH---QHRILHRDLKPQNLLI 152
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLL 196
+ + K++DFGL++ F + V TL Y AP+ + S + + D++S G +
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 197 EIVSGR 202
E+++G+
Sbjct: 212 EMITGK 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 174
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAP 192
Query: 175 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 201
E I + ++ D++S GV++ +++G
Sbjct: 193 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 15/182 (8%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G + A+K + + +E+A + + HEN+V L LV +
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIK--HENIVTLEDIYESTTHYYLVMQLVSGG 91
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL---DQ 139
L +L R + K +I + + Y+HE +VHRD+K N+L ++
Sbjct: 92 ELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEE 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
N I+DFGLSK+ I + GT GY+APE ++ D +S GV+ ++
Sbjct: 145 NSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
Query: 200 SG 201
G
Sbjct: 202 CG 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G IVA+K L E + + E++ + ++ H N+V L C LV+++M
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELH--HPNIVSLIDVIHSERCLTLVFEFME 102
Query: 81 NN---SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ L + G + + K + + RG+A+ H Q ++HRD+K N+L+
Sbjct: 103 KDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCH---QHRILHRDLKPQNLLI 152
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLL 196
+ + K++DFGL++ F + V TL Y AP+ + S + + D++S G +
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211
Query: 197 EIVSGR 202
E+++G+
Sbjct: 212 EMITGK 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLG 170
+ L ++H V+HR+IK+ NILL + + K++DFG +++ PE + + + GT
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPY 182
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
++APE K D++S G++ +E++ G
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 65 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 117
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 118 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 172
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 173 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 232
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 233 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLG 170
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T GT
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPE 175
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
YLAPE R D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 26 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 78
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 79 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 133
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 134 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 193
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLG 170
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPE 170
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 29 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 81
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 82 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 136
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 137 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 196
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 197 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 235
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 27 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 79
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 80 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 134
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 135 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 194
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 195 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
I +K SV + + EVA + ++ H N++KL+ D LV +
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLD--HPNIMKLYEFFEDKRNYYLVMEVYRGGE 107
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L ++ R KF I+ + G Y+H+ ++VHRD+K N+LL+
Sbjct: 108 LFDEII----LRQKFSEVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRD 160
Query: 144 ---KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGLS F E + R+ GT Y+APE + + K DV+S GV+L ++
Sbjct: 161 ALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLC 217
Query: 201 G 201
G
Sbjct: 218 G 218
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS-- 179
Q H VHRDIK N+LLD N + +++DFG ++ T S+ GT Y++PE +
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 180 ---GRLTRKSDVYSFGVLLLEIVSGRT 203
G+ + D +S GV + E++ G T
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 122 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS-- 179
Q H VHRDIK N+LLD N + +++DFG ++ T S+ GT Y++PE +
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 180 ---GRLTRKSDVYSFGVLLLEIVSGRT 203
G+ + D +S GV + E++ G T
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 52 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 104
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 105 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 159
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 160 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 219
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 220 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 258
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--------IL 74
G VAVK+ S + E+ + E V + HEN++ G I + L
Sbjct: 32 GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GFIAADNKDNGTWTQLWL 84
Query: 75 VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-----QPHVVHRD 129
V DY + SL L R + ++ + GLA++H EI +P + HRD
Sbjct: 85 VSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 139
Query: 130 IKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLGYLAPEYAISG------ 180
+K+ NIL+ +N I+D GL+ T I GT Y+APE
Sbjct: 140 LKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 199
Query: 181 RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 217
+++D+Y+ G++ EI + + D QL Y LV
Sbjct: 200 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 238
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
++LL KRR R + +G+ Y+H V+HRD+K N+ L+ + + KI
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKI 183
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 205
DFGL+ + T + GT Y+APE + + D++S G +L ++ G+
Sbjct: 184 GDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 206 D 206
+
Sbjct: 243 E 243
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 51 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 107
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 108 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 161
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 159
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLG 170
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPE 170
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLG 170
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPE 170
Query: 171 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 202
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LIMQLMPFGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 159
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
++LL KRR R + +G+ Y+H V+HRD+K N+ L+ + + KI
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKI 183
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 205
DFGL+ E + GT Y+APE + + D++S G +L ++ G+
Sbjct: 184 GDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 206 D 206
+
Sbjct: 243 E 243
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 103
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 104 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 157
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
I +K SV + + EVA + ++ H N++KL+ D LV +
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLD--HPNIMKLYEFFEDKRNYYLVMEVYRGGE 90
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L ++ R KF I+ + G Y+H+ ++VHRD+K N+LL+
Sbjct: 91 LFDEII----LRQKFSEVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRD 143
Query: 144 ---KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
KI DFGLS F E + R+ GT Y+APE + + K DV+S GV+L ++
Sbjct: 144 ALIKIVDFGLSAHF-EVGGKMKERL-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLC 200
Query: 201 G 201
G
Sbjct: 201 G 201
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI FGL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
++LL KRR R + +G+ Y+H V+HRD+K N+ L+ + + KI
Sbjct: 111 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKI 167
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 205
DFGL+ E + GT Y+APE + + D++S G +L ++ G+
Sbjct: 168 GDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Query: 206 D 206
+
Sbjct: 227 E 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI DF L++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 86 QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 145
++LL KRR R + +G+ Y+H V+HRD+K N+ L+ + + KI
Sbjct: 127 RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKI 183
Query: 146 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 205
DFGL+ E + GT Y+APE + + D++S G +L ++ G+
Sbjct: 184 GDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 206 D 206
+
Sbjct: 243 E 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR--- 181
++HRD+K NILLD++ + I+DF ++ + P T T +AGT Y+APE S +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAG 193
Query: 182 LTRKSDVYSFGVLLLEIVSGR 202
+ D +S GV E++ GR
Sbjct: 194 YSFAVDWWSLGVTAYELLRGR 214
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 20 LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
++ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMV 119
Query: 76 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 135
+Y+ + L +R +F R I Y+H +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENL 172
Query: 136 LLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLL 195
L+DQ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 196 LEIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 49 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 105
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 106 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 159
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 26 VAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL 84
VA+K L S + KE + E MA+V+ H + +L G C+ + L+ MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPH--VCRLLGICLTSTVQ-LITQLMPFGCL 110
Query: 85 SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPK 144
+ + + G + + I +G+ Y+ + +VHRD+ N+L+ + K
Sbjct: 111 LDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVK 164
Query: 145 ISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
I+DFG +KL E + + + ++A E + T +SDV+S+GV + E+++
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
I L ++H Q +++RD+K NI+L+ + K++DFGL K + T ++ GT+
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTI 185
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
Y+APE + R D +S G L+ ++++G
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 169
I L ++H Q +++RD+K NI+L+ + K++DFGL K + T ++ GT+
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTI 185
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
Y+APE + R D +S G L+ ++++G
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 42/213 (19%)
Query: 43 MSEVASMANVN-----------VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGE 91
+SEV +A++N + N VK + +Y N +L + E
Sbjct: 50 LSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE 109
Query: 92 E--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFG 149
++R ++ W+ R+I+ L+YIH + ++HR++K NI +D++ N KI DFG
Sbjct: 110 NLNQQRDEY-WRLFRQIL----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFG 161
Query: 150 LSK--------------LFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVL 194
L+K P ++ ++++ + GT Y+A E +G K D YS G++
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGII 220
Query: 195 LLEIVSGRTAVDFDVQLGEYHLVDKVRSINMKL 227
E + F +++ K+RS++++
Sbjct: 221 FFEXI-----YPFSTGXERVNILKKLRSVSIEF 248
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 212
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+++DQ +++DFG +K T + GT YLAPE I
Sbjct: 159 ---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIII 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALT 177
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 124 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAP 174
+V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 175 EYAI-SGRLTRKSDVYSFGVLLLEIVSGR 202
E + S + +R DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 124 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAP 174
+V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 175 EYAI-SGRLTRKSDVYSFGVLLLEIVSGR 202
E + S + +R DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 25 IVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
+VA+K + +E ++G + EV+ + ++ H N+V LH LV++Y+ +
Sbjct: 29 LVALKEIRLEHEEGAPCTAIREVSLLKDLK--HANIVTLHDIIHTEKSLTLVFEYL-DKD 85
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 143
L Q L + + + + RGLAY H + V+HRD+K N+L+++
Sbjct: 86 LKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGEL 139
Query: 144 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIVSGR 202
K++DFGL++ T V TL Y P+ + S + + D++ G + E+ +GR
Sbjct: 140 KLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K + + GT YLAPE +
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIIL 232
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH-ISTR-VAGTLGYLAPEYAISGRL 182
+++RD+K N++LD + KI+DFG+ K EN ++T+ GT Y+APE
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVD 206
+ D ++FGVLL E+++G+ +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR 256
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 165
+I I RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T
Sbjct: 130 LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGY 182
Query: 166 AGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX----GTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN-VCHENLVKLHGGCIDGPCRILVYDY 78
+++ +VA+K +S KQ +++ + + + + H N ++ G + LV +Y
Sbjct: 76 VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
S S L +K + A + G +GLAY+H +++HRD+K NILL
Sbjct: 136 C-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH---NMIHRDVKAGNILLS 188
Query: 139 QNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS---GRLTRKSDVYSFGVL 194
+ K+ DFG + + P N GT ++APE ++ G+ K DV+S G+
Sbjct: 189 EPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242
Query: 195 LLEIVSGRTAV-DFDVQLGEYHLV 217
+E+ + + + + YH+
Sbjct: 243 CIELAERKPPLFNMNAMSALYHIA 266
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 8/118 (6%)
Query: 87 TLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKIS 146
T LG+ + K G + ++ + +GL YIH ++HRD+K N+ ++++ KI
Sbjct: 114 TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKIL 170
Query: 147 DFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
DFGL++ + + + V T Y APE ++ R T+ D++S G ++ E+++G+T
Sbjct: 171 DFGLAR---QADSEMXGXVV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-T 168
+ +G+ ++ +HRD+ NILL + KI DFGL++ ++ ++ A
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
L ++APE T +SDV+SFGVLL EI S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-T 168
+ +G+ ++ +HRD+ NILL + KI DFGL++ ++ ++ A
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
L ++APE T +SDV+SFGVLL EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-T 168
+ +G+ ++ +HRD+ NILL + KI DFGL++ ++ ++ A
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
L ++APE T +SDV+SFGVLL EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 19/187 (10%)
Query: 23 GTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G VA+K LS +S+ K E+ + ++ HEN++ L YD+
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLLDVFTPASSLRNFYDFYL 106
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
QT L ++ KF + + ++ + +GL YIH VVHRD+K N+ ++++
Sbjct: 107 VMPFMQTDL-QKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNED 162
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAG---TLGYLAPEYAISG-RLTRKSDVYSFGVLLL 196
KI DFGL++ H + G T Y APE +S + D++S G ++
Sbjct: 163 CELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 197 EIVSGRT 203
E+++G+T
Sbjct: 216 EMLTGKT 222
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN-VCHENLVKLHGGCIDGPCRILVYDY 78
+++ +VA+K +S KQ +++ + + + + H N ++ G + LV +Y
Sbjct: 37 VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
S S L +K + A + G +GLAY+H +++HRD+K NILL
Sbjct: 97 C-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH---NMIHRDVKAGNILLS 149
Query: 139 QNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS---GRLTRKSDVYSFGVL 194
+ K+ DFG + + P N GT ++APE ++ G+ K DV+S G+
Sbjct: 150 EPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 195 LLEIVSGRTAV-DFDVQLGEYHLV 217
+E+ + + + + YH+
Sbjct: 204 CIELAERKPPLFNMNAMSALYHIA 227
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 183
+HRD+ NILL + KI DFGL++ ++ ++ A L ++APE T
Sbjct: 212 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 271
Query: 184 RKSDVYSFGVLLLEIVS 200
+SDV+SFGVLL EI S
Sbjct: 272 IQSDVWSFGVLLWEIFS 288
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 232
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 154 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 206
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 251
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 25 IVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
+ A+K+LS + + F E MA N +V+L D +V +YMP
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW--VVQLFYAFQDDRYLYMVMEYMPG 158
Query: 82 NSLSQTLLGEE--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
L + + ++ A+F E+++ L IH +HRD+K N+LLD+
Sbjct: 159 GDLVNLMSNYDVPEKWARF---YTAEVVLA----LDAIH---SMGFIHRDVKPDNMLLDK 208
Query: 140 NFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAIS----GRLTRKSDVYSFGVL 194
+ + K++DFG K+ E T V GT Y++PE S G R+ D +S GV
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 195 LLEIVSGRTAVDFDVQLGEY 214
L E++ G T D +G Y
Sbjct: 268 LYEMLVGDTPFYADSLVGTY 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 25 IVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
+ A+K+LS + + F E MA N +V+L D +V +YMP
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW--VVQLFYAFQDDRYLYMVMEYMPG 158
Query: 82 NSLSQTLLGEE--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
L + + ++ A+F E+++ L IH +HRD+K N+LLD+
Sbjct: 159 GDLVNLMSNYDVPEKWARF---YTAEVVLA----LDAIH---SMGFIHRDVKPDNMLLDK 208
Query: 140 NFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAIS----GRLTRKSDVYSFGVL 194
+ + K++DFG K+ E T V GT Y++PE S G R+ D +S GV
Sbjct: 209 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 195 LLEIVSGRTAVDFDVQLGEY 214
L E++ G T D +G Y
Sbjct: 268 LYEMLVGDTPFYADSLVGTY 287
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYM 79
+ G + A KV+ +S++ ++++ E+ +A + H +VKL G DG I++ ++
Sbjct: 34 ETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYIVKLLGAYYHDGKLWIMI-EFC 90
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
P ++ +L ++ + + + + L ++H + ++HRD+K N+L+
Sbjct: 91 PGGAVDAIMLELDRGLTE---PQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTL 144
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGRLTR-----KSDVYSFG 192
+ +++DFG+S +N + R + GT ++APE + + K+D++S G
Sbjct: 145 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 201
Query: 193 VLLLEIVS 200
+ L+E+
Sbjct: 202 ITLIEMAQ 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH-ISTR-VAGTLGYLAPEYAISGRL 182
+++RD+K N++LD + KI+DFG+ K EN ++T+ GT Y+APE
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVD 206
+ D ++FGVLL E+++G+ +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
+ + A KV+ +S++ +++M E+ +A+ + H N+VKL ++ ++
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILIEFCA 117
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
++ +L E+ + + + L Y+H+ ++HRD+K NIL +
Sbjct: 118 GGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLD 171
Query: 141 FNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGR-----LTRKSDVYSFGV 193
+ K++DFG+S +NT I R + GT ++APE + K+DV+S G+
Sbjct: 172 GDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 194 LLLEIV 199
L+E+
Sbjct: 229 TLIEMA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
+ + A KV+ +S++ +++M E+ +A+ + H N+VKL ++ ++
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILIEFCA 117
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
++ +L E+ + + + L Y+H+ ++HRD+K NIL +
Sbjct: 118 GGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLD 171
Query: 141 FNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGR-----LTRKSDVYSFGV 193
+ K++DFG+S +NT I R GT ++APE + K+DV+S G+
Sbjct: 172 GDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 194 LLLEIV 199
L+E+
Sbjct: 229 TLIEMA 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIG 111
H N+VKL+ +LV++++ + L + L G E AK ++ +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLL 110
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
G+AY H+ V+HRD+K N+L+++ KI+DFGL++ F + V TL Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 172 LAPEYAI-SGRLTRKSDVYSFGVLLLEIVSG 201
AP+ + S + + D++S G + E+V+G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 25 IVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 81
+ A+K+LS + + F E MA N +V+L D +V +YMP
Sbjct: 96 VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW--VVQLFYAFQDDRYLYMVMEYMPG 153
Query: 82 NSLSQTLLGEE--KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
L + + ++ A+F E+++ L IH +HRD+K N+LLD+
Sbjct: 154 GDLVNLMSNYDVPEKWARF---YTAEVVLA----LDAIH---SMGFIHRDVKPDNMLLDK 203
Query: 140 NFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAIS----GRLTRKSDVYSFGVL 194
+ + K++DFG K+ E T V GT Y++PE S G R+ D +S GV
Sbjct: 204 SGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 195 LLEIVSGRTAVDFDVQLGEY 214
L E++ G T D +G Y
Sbjct: 263 LYEMLVGDTPFYADSLVGTY 282
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE ++ D+++ GV+L ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 118
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE ++ D+++ GV+L ++ G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE ++ D+++ GV+L ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
+ + A KV+ +S++ +++M E+ +A+ + H N+VKL ++ ++
Sbjct: 60 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILIEFCA 117
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
++ +L E+ + + + L Y+H+ ++HRD+K NIL +
Sbjct: 118 GGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLD 171
Query: 141 FNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGR-----LTRKSDVYSFGV 193
+ K++DFG+S +NT I R + GT ++APE + K+DV+S G+
Sbjct: 172 GDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 194 LLLEIV 199
L+E+
Sbjct: 229 TLIEMA 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIG 111
H N+VKL+ +LV++++ + L + L G E AK ++ +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLL 110
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
G+AY H+ V+HRD+K N+L+++ KI+DFGL++ F + V TL Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 172 LAPEYAI-SGRLTRKSDVYSFGVLLLEIVSG 201
AP+ + S + + D++S G + E+V+G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+G+ Y+H + ++HRDIK SN+L+ ++ + KI+DFG+S F + +S V GT +
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAF 203
Query: 172 LAPEYAISGRLT---RKSDVYSFGVLLLEIVSGR 202
+APE R + DV++ GV L V G+
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 18 IRLQDGTIV--AVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDG---- 69
++ +DG+ V AVK+L + + +EF+ E A M + H ++ KL G +
Sbjct: 44 LKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD--HPHVAKLVGVSLRSRAKG 101
Query: 70 --PCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQPHV 125
P +++ +M + L LL F + ++ I G+ Y+ +
Sbjct: 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NF 158
Query: 126 VHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
+HRD+ N +L ++ ++DFGLS K++ + + +LA E T
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTV 218
Query: 185 KSDVYSFGVLLLEIVS-GRT 203
SDV++FGV + EI++ G+T
Sbjct: 219 HSDVWAFGVTMWEIMTRGQT 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 17/109 (15%)
Query: 113 GLAYIHEEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI----ST 163
GLA++H EI +P + HRD K+ N+L+ N I+D GL+ + + + ++ +
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 164 RVAGTLGYLAPEYAISGRLT------RKSDVYSFGVLLLEIVSGRTAVD 206
RV GT Y+APE T + +D+++FG++L EI + RT V+
Sbjct: 177 RV-GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI-ARRTIVN 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 95/188 (50%), Gaps = 20/188 (10%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYM 79
+ G + A KV+ +S++ ++++ E+ +A + H +VKL G DG I++ ++
Sbjct: 42 ETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYIVKLLGAYYHDGKLWIMI-EFC 98
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
P ++ +L ++ + + + + L ++H + ++HRD+K N+L+
Sbjct: 99 PGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTL 152
Query: 140 NFNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGRLTR-----KSDVYSFG 192
+ +++DFG+S +N + R + GT ++APE + + K+D++S G
Sbjct: 153 EGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG 209
Query: 193 VLLLEIVS 200
+ L+E+
Sbjct: 210 ITLIEMAQ 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 18 IRLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILV 75
I + G VA+K LS +S+ K E+ + ++ HEN++ L
Sbjct: 62 IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLLDVFTPASSLRNF 119
Query: 76 YDY---MPNNSLS-QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIK 131
YD+ MP Q ++G E K + ++ + +GL YIH VVHRD+K
Sbjct: 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHSA---GVVHRDLK 171
Query: 132 TSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISG-RLTRKSDVY 189
N+ ++++ KI DFGL++ E T ++ TR Y APE +S + D++
Sbjct: 172 PGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIW 226
Query: 190 SFGVLLLEIVSGRT 203
S G ++ E+++G+T
Sbjct: 227 SVGCIMAEMLTGKT 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 23 GTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRI-LVYDYMP 80
G + AVK + ++ +G E +E+A + + HEN+V L + P + LV +
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIK--HENIVALED-IYESPNHLYLVMQLVS 103
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL--- 137
L ++ + + K +I + + Y+H + +VHRD+K N+L
Sbjct: 104 GGELFDRIV----EKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQ 156
Query: 138 DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLE 197
D+ ISDFGLSK+ E + + GT GY+APE ++ D +S GV+
Sbjct: 157 DEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 214
Query: 198 IVSG 201
++ G
Sbjct: 215 LLCG 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 142
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 197
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE ++ D+++ GV+L ++ G
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTR 164
++ + RGL YIH ++HRD+K SN+ ++++ +I DFGL++ E T +++TR
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR 184
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
Y APE ++ + D++S G ++ E++ G+
Sbjct: 185 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIG 111
H N+VKL+ +LV++++ + L + L G E AK ++ +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLL 110
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
G+AY H+ V+HRD+K N+L+++ KI+DFGL++ F + + TL Y
Sbjct: 111 NGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWY 166
Query: 172 LAPEYAI-SGRLTRKSDVYSFGVLLLEIVSG 201
AP+ + S + + D++S G + E+V+G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ ++ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 21 QDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVY 76
+ G A+K+L V+ KQ E ++E + VN LVKL D +V
Sbjct: 51 ESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMVM 107
Query: 77 DYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
+Y+ + L +R +F R I Y+H +++RD+K N+L
Sbjct: 108 EYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLL 160
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLL 196
+D+ +++DFG +K T + GT YLAPE +S + D ++ GVL+
Sbjct: 161 IDEQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIY 216
Query: 197 EIVSGRTA--VDFDVQLGEYHLVDKVR 221
E+ +G D +Q+ E + KVR
Sbjct: 217 EMAAGYPPFFADQPIQIYEKIVSGKVR 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N++ L DG +V + L +L R+ F + ++ I + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVE 130
Query: 116 YIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGY 171
Y+H + VVHRD+K SNIL +D++ NP +I DFG +K + T T +
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 172 LAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 203
+APE D++S GVLL ++G T
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTR 164
++ + RGL YIH ++HRD+K SN+ ++++ +I DFGL++ E T +++TR
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
Y APE ++ + D++S G ++ E++ G+
Sbjct: 193 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 35/205 (17%)
Query: 23 GTIVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--ILVYDY 78
G +VAVK + + ++ + E+ + ++ HEN+V L R LV+DY
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-GHENIVNLLNVLRADNDRDVYLVFDY 92
Query: 79 MPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD 138
M +T L R ++ ++ + + + Y+H ++HRD+K SNILL+
Sbjct: 93 M------ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLN 143
Query: 139 QNFNPKISDFGLSKLF--------------PENTTH------ISTRVAGTLGYLAPEYAI 178
+ K++DFGLS+ F ENT + I T T Y APE +
Sbjct: 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 179 -SGRLTRKSDVYSFGVLLLEIVSGR 202
S + T+ D++S G +L EI+ G+
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 10/100 (10%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTR 164
++ + RGL YIH ++HRD+K SN+ ++++ +I DFGL++ E T +++TR
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
Query: 165 VAGTLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 203
Y APE ++ + D++S G ++ E++ G+
Sbjct: 193 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 26 VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH--------------GGCIDGPC 71
VA+K + + Q K + E+ + ++ H+N+VK+ G +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLD--HDNIVKVFEILGPSGSQLTDDVGSLTELNS 96
Query: 72 RILVYDYMPN---NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHR 128
+V +YM N L Q L EE R + + RGL YIH +V+HR
Sbjct: 97 VYIVQEYMETDLANVLEQGPLLEEHARL---------FMYQLLRGLKYIHSA---NVLHR 144
Query: 129 DIKTSNILLD-QNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAIS-GRLTR 184
D+K +N+ ++ ++ KI DFGL+++ + +H G T Y +P +S T+
Sbjct: 145 DLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK 204
Query: 185 KSDVYSFGVLLLEIVSGRT 203
D+++ G + E+++G+T
Sbjct: 205 AIDMWAAGCIFAEMLTGKT 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 124 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAP 174
+V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T Y AP
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 175 EYAI-SGRLTRKSDVYSFGVLLLEIVSGR 202
E + S + +R DV+S G +L E+ R
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
+ + A KV+ +S++ +++M E+ +A+ + H N+VKL ++ ++
Sbjct: 33 ETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILIEFCA 90
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
++ +L E+ + + + L Y+H+ ++HRD+K NIL +
Sbjct: 91 GGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLD 144
Query: 141 FNPKISDFGLSKLFPENT-THISTRVA--GTLGYLAPEYAISGR-----LTRKSDVYSFG 192
+ K++DFG+S +NT T I R + GT ++APE + K+DV+S G
Sbjct: 145 GDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 201
Query: 193 VLLLEIV 199
+ L+E+
Sbjct: 202 ITLIEMA 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GL Y+H Q ++HRD+K +N+LLD+N K++DFGL+K F +V T Y
Sbjct: 123 QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWY 178
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIV 199
APE R+ D+++ G +L E++
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT YLAP +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPAIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
+I + I + L ++H ++ V+HRD+K SN+L++ K+ DFG+S ++ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTI 212
Query: 165 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVD 206
AG Y+APE I+ L + KSD++S G+ ++E+ R D
Sbjct: 213 DAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALT 177
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 166
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 167 -ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 168
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 158 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 212
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 119 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 173
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 174 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 166
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 167 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 113 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 167
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 168 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 118 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 172
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 173 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 120 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 174
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 175 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 168
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 164 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 218
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 219 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 59 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 118
LVKL D +V +Y+ + L +R +F R I Y+H
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 119 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 178
+++RD+K N+L+DQ +++DFG +K T + GT LAPE +
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEALAPEIIL 211
Query: 179 SGRLTRKSDVYSFGVLLLEIVSGRTA--VDFDVQLGEYHLVDKVR 221
S + D ++ GVL+ E+ +G D +Q+ E + KVR
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIHQILESVN 144
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
+IH Q +VHRD+K N+LL K++DFGL+ + + AGT GYL
Sbjct: 145 HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYL 200
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 128 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 182
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 183 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
+ + + +GL + H +V+HRD+K N+L+++N K++DFGL++ F S
Sbjct: 104 KSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160
Query: 164 RVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAV----DFDVQL 211
V TL Y P+ +L S D++S G + E+ + + D D QL
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 24/195 (12%)
Query: 21 QDGTIVAVKVL---------SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPC 71
+ G + AVKVL VE EK +S + H L +L C P
Sbjct: 46 ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-------HPFLTQLFC-CFQTPD 97
Query: 72 RILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIK 131
R+ N L+ ++ +F R I L ++H++ +++RD+K
Sbjct: 98 RLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLK 151
Query: 132 TSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSF 191
N+LLD + K++DFG+ K N +T GT Y+APE D ++
Sbjct: 152 LDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEILQEMLYGPAVDWWAM 210
Query: 192 GVLLLEIVSGRTAVD 206
GVLL E++ G +
Sbjct: 211 GVLLYEMLCGHAPFE 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 166
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 168
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 167
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 167
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 166
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 167
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 171
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 174
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + L++D + L + ++ R + I I +
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVL 135
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
+ H Q VVHRD+K N+LL K++DFGL+ + E AGT GYL
Sbjct: 136 HCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYL 191
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 174
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHI 161
+ + + +GLA+ H V+HRD+K N+L++ K++DFGL++ F P T
Sbjct: 105 KSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--- 158
Query: 162 STRVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
T TL Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 167
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 166
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
+I + I + L ++H ++ V+HRD+K SN+L++ K+ DFG+S ++
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID- 169
Query: 165 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVD 206
AG Y+APE I+ L + KSD++S G+ ++E+ R D
Sbjct: 170 -AGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV 171
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G +VA+K L E++ + E++ + +N H N+VKL LV++++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLVFEFL- 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
S+ + + + + +GLA+ H V+HRD+K N+L++
Sbjct: 88 --SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE 142
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV 199
K++DFGL++ F V TL Y APE + + + D++S G + E+V
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 200 SGRTAVDFDVQLGE 213
+ R D ++ +
Sbjct: 202 TRRALFPGDSEIDQ 215
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G +VA+K L E++ + E++ + +N H N+VKL LV++++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLVFEFL- 85
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
S+ + + + + +GLA+ H V+HRD+K N+L++
Sbjct: 86 --SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE 140
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV 199
K++DFGL++ F V TL Y APE + + + D++S G + E+V
Sbjct: 141 GAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 200 SGRTAVDFDVQLGE 213
+ R D ++ +
Sbjct: 200 TRRALFPGDSEIDQ 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVL 117
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
+ H Q VVHRD+K N+LL K++DFGL+ + + AGT GYL
Sbjct: 118 HCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALA 169
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G +VA+K L E++ + E++ + +N H N+VKL LV++++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLVFEFL- 87
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
S+ + + + + +GLA+ H V+HRD+K N+L++
Sbjct: 88 --SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 142
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV 199
K++DFGL++ F V TL Y APE + + + D++S G + E+V
Sbjct: 143 GAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 200 SGRTAVDFDVQLGE 213
+ R D ++ +
Sbjct: 202 TRRALFPGDSEIDQ 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 23 GTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMP 80
G +VA+K L E++ + E++ + +N H N+VKL LV++++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLVFEFL- 86
Query: 81 NNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 140
S+ + + + + +GLA+ H V+HRD+K N+L++
Sbjct: 87 --SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 141
Query: 141 FNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV 199
K++DFGL++ F V TL Y APE + + + D++S G + E+V
Sbjct: 142 GAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 200 SGRTAVDFDVQLGE 213
+ R D ++ +
Sbjct: 201 TRRALFPGDSEIDQ 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ +
Sbjct: 115 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALD 169
Query: 164 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 198
V TL Y APE + D++S G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 23/188 (12%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVN---VCHENLVKLHGGCIDGPCRILVYD 77
Q +VAVK + ++GEK + E +N + H N+V+ + +V +
Sbjct: 42 QANELVAVKYI----ERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME 95
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y L + + +F R + G++Y H V HRD+K N LL
Sbjct: 96 YASGGELFERICNA----GRFSEDEARFFFQQLISGVSYAHAM---QVAHRDLKLENTLL 148
Query: 138 DQNFNP--KISDFGLSKLFPENTTHISTRVA-GTLGYLAPEYAISGRLTRK-SDVYSFGV 193
D + P KI+DFG SK + H + A GT Y+APE + K +DV+S GV
Sbjct: 149 DGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 194 LLLEIVSG 201
L ++ G
Sbjct: 206 TLYVMLVG 213
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 118 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 173
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 116 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 171
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 117 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 172
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 171
+GLA+ H V+HRD+K N+L++ K++DFGL++ F V TL Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 169
Query: 172 LAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
APE + + + D++S G + E+V+ R D ++ +
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTL 169
+GL++ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTL 167
Query: 170 GYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGE 213
Y APE + + + D++S G + E+V+ R D ++ +
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 26 VAVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
VA++++ +E + K F EV MA HEN+V G C+ P ++ +
Sbjct: 58 VAIRLIDIERDNEDQLKAFKREV--MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115
Query: 84 LSQTLLGEEKRRAK--FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 141
L + R AK R+I I +G+ Y+H + ++H+D+K+ N+ D N
Sbjct: 116 LYSVV-----RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NG 166
Query: 142 NPKISDFGL---SKLFPENTTHISTRVA-GTLGYLAPEYAISGR---------LTRKSDV 188
I+DFGL S + R+ G L +LAPE ++ SDV
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 189 YSFGVLLLEI 198
++ G + E+
Sbjct: 227 FALGTIWYEL 236
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 71 CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDI 130
C +++ + M L + +E+ F + EI+ IG + ++H ++ HRD+
Sbjct: 100 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 154
Query: 131 KTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSD 187
K N+L +++ K++DFG +K E T + T Y+APE + + D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 188 VYSFGVLLLEIVSG 201
++S GV++ ++ G
Sbjct: 212 MWSLGVIMYILLCG 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 163
+ + + +GL + H +V+HRD+K N+L+++N K+++FGL++ F S
Sbjct: 104 KSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160
Query: 164 RVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV-SGRTAV---DFDVQL 211
V TL Y P+ +L S D++S G + E+ +GR D D QL
Sbjct: 161 EVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 71 CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDI 130
C +++ + M L + +E+ F + EI+ IG + ++H ++ HRD+
Sbjct: 81 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 135
Query: 131 KTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSD 187
K N+L +++ K++DFG +K E T + T Y+APE + + D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 188 VYSFGVLLLEIVSG 201
++S GV++ ++ G
Sbjct: 193 MWSLGVIMYILLCG 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL------------ 153
I + I + ++H + ++HRD+K SNI + K+ DFGL
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 154 -FPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLG 212
P TH GT Y++PE + K D++S G++L E++ F Q+
Sbjct: 226 PMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS-----FSTQME 278
Query: 213 EYHLVDKVRSINMKL 227
++ VR++ L
Sbjct: 279 RVRIITDVRNLKFPL 293
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHENLVKLHGGCIDGPCRILVYDYM 79
Q +VAVK + ++GEK + + N ++ H N+V+ + +V +Y
Sbjct: 42 QSNELVAVKYI----ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 97
Query: 80 PNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ 139
L + + +F R + G++Y H V HRD+K N LLD
Sbjct: 98 SGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLLDG 150
Query: 140 NFNP--KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK-SDVYSFGVLLL 196
+ P KI DFG SK ++ ST GT Y+APE + K +DV+S GV L
Sbjct: 151 SPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLY 208
Query: 197 EIVSG 201
++ G
Sbjct: 209 VMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVN---VCHENLVKLHGGCIDGPCRILVYD 77
Q +VAVK + ++GEK + E +N + H N+V+ + +V +
Sbjct: 41 QSNELVAVKYI----ERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME 94
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y L + + +F R + G++Y H V HRD+K N LL
Sbjct: 95 YASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLL 147
Query: 138 DQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK-SDVYSFGVL 194
D + P KI DFG SK ++ ST GT Y+APE + K +DV+S GV
Sbjct: 148 DGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVT 205
Query: 195 LLEIVSG 201
L ++ G
Sbjct: 206 LYVMLVG 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S GV++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 35 SKQGEKEFMSEVASMANVNVCHENLVKLHGG---CIDGP-CRILVYDYMPNNSLSQTLLG 90
+K + F E + + H N+V+ + + G C +LV + + +L L
Sbjct: 65 TKSERQRFKEEAEXLKGLQ--HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL-- 120
Query: 91 EEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-QNFNPKISDFG 149
KR K R I +GL ++H P ++HRD+K NI + + KI D G
Sbjct: 121 --KRFKVXKIKVLRSWCRQILKGLQFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLG 177
Query: 150 LSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 200
L+ L + V GT + APE + DVY+FG LE +
Sbjct: 178 LATL---KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXAT 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 18 IRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 77
+ LQ+G AVK++ ++ EV ++ ++N+++L D LV++
Sbjct: 33 VSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG-NKNILELIEFFEDDTRFYLVFE 91
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
+ S+ L +++ F + ++ + L ++H + + HRD+K NIL
Sbjct: 92 KLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAHRDLKPENILC 144
Query: 138 D--QNFNP-KISDFGLSKLFPEN------TTHISTRVAGTLGYLAPEY--AISGRLT--- 183
+ + +P KI DF L N TT T G+ Y+APE + + T
Sbjct: 145 ESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYD 204
Query: 184 RKSDVYSFGVLLLEIVSG 201
++ D++S GV+L ++SG
Sbjct: 205 KRCDLWSLGVVLYIMLSG 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 97 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLF 154
+F R + G++Y H + HRD+K N LLD + P KI DFG SK
Sbjct: 112 RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168
Query: 155 PENTTHISTRVAGTLGYLAPEYAISGRLTRK-SDVYSFGVLLLEIVSG 201
++ ST GT Y+APE + K +DV+S GV L ++ G
Sbjct: 169 VLHSQPKST--VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S GV++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + L++D + L + ++ R + I I +
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVL 124
Query: 116 YIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYL 172
+ H Q VVHR++K N+LL K++DFGL+ + E AGT GYL
Sbjct: 125 HCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYL 180
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 181 SPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 183
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 190
Query: 184 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 183
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 184 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 214
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 183
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 184 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 98 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 154
F + EI IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 158 FTEREASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 212
Query: 155 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
E T+H S T T Y+APE + + D +S GV+ ++ G
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ +T + T T Y APE +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E+V G
Sbjct: 203 NVDIWSVGCIMGELVKG 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 239
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 207
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLFPENTTHI 161
+ + I +AY+HE +VHRD+K N+L + KI+DFGLSK+ E+ +
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLM 207
Query: 162 STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
T V GT GY APE + D++S G++ ++ G
Sbjct: 208 KT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 226
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 183
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 184 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 206
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 23 GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
G +A K++ + ++E +E++ M ++ H NL++L+ +LV +Y+
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLD--HANLIQLYDAFESKNDIVLVMEYVDGG 171
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL-LDQNF 141
L ++ E + + I G+ ++H Q +++H D+K NIL ++++
Sbjct: 172 ELFDRIIDESYNLTELDTIL---FMKQICEGIRHMH---QMYILHLDLKPENILCVNRDA 225
Query: 142 NP-KISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
KI DFGL++ + P ++ GT +LAPE ++ +D++S GV+ ++
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL 282
Query: 200 SG 201
SG
Sbjct: 283 SG 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 191
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 219
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 220
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 183
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 187
Query: 184 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 125 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 192
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQL 211
R + V+S G+LL ++V G + D ++
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 24/188 (12%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T V +KVL + + F E ASM + + H++LV +G C+ G ILV +++ S
Sbjct: 41 TEVLLKVLDKAHRNYSESFF-EAASMMS-KLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL-----D 138
L T L + K WK E+ + + ++ E ++H ++ NILL
Sbjct: 99 LD-TYLKKNKNCINILWKL--EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDR 152
Query: 139 QNFNP---KISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGV 193
+ NP K+SD G+S + P++ + R+ ++ PE + + L +D +SFG
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDI--LQERIP----WVPPECIENPKNLNLATDKWSFGT 206
Query: 194 LLLEIVSG 201
L EI SG
Sbjct: 207 TLWEICSG 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 38/195 (19%)
Query: 23 GTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCR--ILVYDY 78
G + VKVL V S + ++F E + + H N++ + G C P L+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS--HPNVLPVLGACQSPPAPHPTLITHW 90
Query: 79 MPNNSLSQTL------LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKT 132
MP SL L + ++ + KF + + RG+A++H ++P + + +
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQAVKFA--------LDMARGMAFLHT-LEPLIPRHALNS 141
Query: 133 SNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL---GYLAPEYAISGRLT----RK 185
++++D++ +IS + S + G + ++APE A+ + R
Sbjct: 142 RSVMIDEDMTARISMADVK---------FSFQSPGRMYAPAWVAPE-ALQKKPEDTNRRS 191
Query: 186 SDVYSFGVLLLEIVS 200
+D++SF VLL E+V+
Sbjct: 192 ADMWSFAVLLWELVT 206
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 206 NVDIWSVGCIMGEMIKG 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 95 RAKFGWKARREIIMGIGR----GLAYIHEEIQPHVVHRDIKTSNILLDQN--FNPKISDF 148
R + R ++I I R L Y+H + + HRDIK N L N F K+ DF
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 149 GLSKLF---PENTTHISTRVAGTLGYLAPEY--AISGRLTRKSDVYSFGVLLLEIVSGRT 203
GLSK F + T AGT ++APE + K D +S GVLL ++ G
Sbjct: 215 GLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG-- 272
Query: 204 AVDF 207
AV F
Sbjct: 273 AVPF 276
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSK 152
++ I G+A++H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 120 LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 153 LFPENTTHISTRV---AGTLGYLAPE-------YAISGRLTRKSDVYSFGVLLLEIVS 200
+ T + +GT G+ APE RLTR D++S G + I+S
Sbjct: 177 KLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E+V G
Sbjct: 205 NVDIWSVGCIMGELVKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSK 152
++ I G+A++H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 138 LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 153 LFPENTTHISTRV---AGTLGYLAPEY---AISGRLTRKSDVYSFGVLLLEIVS 200
+ +GT G+ APE + RLTR D++S G + I+S
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSK 152
++ I G+A++H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 138 LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 153 LFPENTTHISTRV---AGTLGYLAPEY---AISGRLTRKSDVYSFGVLLLEIVS 200
+ +GT G+ APE + RLTR D++S G + I+S
Sbjct: 195 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 20 LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDY 78
L DG A+K + +Q +E E N H N+++L C+ + + +
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILRLVAYCLRERGAKHEAWLL 108
Query: 79 MPNNSLSQTLLGE-EKRRAKFGWKARREII---MGIGRGLAYIHEEIQPHVVHRDIKTSN 134
+P TL E E+ + K + +I+ +GI RGL IH + HRD+K +N
Sbjct: 109 LPFFKRG-TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTN 164
Query: 135 ILLDQNFNPKISDFGLSKLFPENTTHIS-TRVAGTL----------GYLAPE-YAISGR- 181
ILL P + D G + H+ +R A TL Y APE +++
Sbjct: 165 ILLGDEGQPVLMDLGSMN---QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHC 221
Query: 182 -LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE 213
+ ++DV+S G +L ++ G D Q G+
Sbjct: 222 VIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 105 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 164
+I + I + L ++H ++ V+HRD+K SN+L++ K DFG+S ++
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 165 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVD 206
AG Y APE I+ L + KSD++S G+ +E+ R D
Sbjct: 197 -AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVSG 201
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-----------SKLF 154
I + I + ++H + ++HRD+K SNI + K+ DFGL + L
Sbjct: 123 IFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 155 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 214
P T GT Y++PE + K D++S G++L E++ F Q+
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-----YPFSTQMERV 234
Query: 215 HLVDKVRSINM 225
+ VR++
Sbjct: 235 RTLTDVRNLKF 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 24 TIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 83
T V +KVL + + F E ASM + + H++LV +G C G ILV +++ S
Sbjct: 41 TEVLLKVLDKAHRNYSESFF-EAASMMS-KLSHKHLVLNYGVCFCGDENILVQEFVKFGS 98
Query: 84 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL-----D 138
L T L + K WK E+ + + ++ E ++H ++ NILL
Sbjct: 99 LD-TYLKKNKNCINILWKL--EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDR 152
Query: 139 QNFNP---KISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGV 193
+ NP K+SD G+S + P++ + R+ ++ PE + + L +D +SFG
Sbjct: 153 KTGNPPFIKLSDPGISITVLPKDI--LQERIP----WVPPECIENPKNLNLATDKWSFGT 206
Query: 194 LLLEIVSG 201
L EI SG
Sbjct: 207 TLWEICSG 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILESVN 117
Query: 116 YIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
+ H +VHRD+K N+LL + K++DFGL+ + + AGT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 110 IGRGLAYIHEEIQPHVVHRDIKTSNILL--DQNFNP-KISDFGLSKLFPENTTHISTRVA 166
I L Y H+ +++HRD+K N+LL +N P K+ DFG++ E+ RV
Sbjct: 139 ILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV- 194
Query: 167 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
GT ++APE + DV+ GV+L ++SG
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 56 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 115
H N+V+LH + LV+D + L + ++ R + I I +
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILESVN 117
Query: 116 YIHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
+ H +VHRD+K N+LL + K++DFGL+ + + AGT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
+PE + D+++ GV+L ++ G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVN---VCHENLVKLHGGCIDGPCRILVYD 77
Q +VAVK + ++GEK + E +N + H N+V+ + +V +
Sbjct: 42 QSNELVAVKYI----ERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME 95
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y L + + +F R + G++Y H V HRD+K N LL
Sbjct: 96 YASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLL 148
Query: 138 DQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK-SDVYSFGVL 194
D + P KI FG SK ++ ST GT Y+APE + K +DV+S GV
Sbjct: 149 DGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 195 LLEIVSG 201
L ++ G
Sbjct: 207 LYVMLVG 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 243 NVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 204 NVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
G+ ++H ++HRD+K SNI++ + KI DFGL++ T+ + T T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIV------SGRTAVD 206
APE + D++S G ++ E+V GR +D
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 172
G+ ++H ++HRD+K SNI++ + KI DFGL++ T+ + T Y
Sbjct: 140 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYR 194
Query: 173 APEYAISGRLTRKSDVYSFGVLLLEIVSG 201
APE + D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIV------SGRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 185 KSDVYSFGVLLLEIVS------GRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 199 NVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 21 QDGTIVAVKVLSVESKQGEKEFMSEVASMANVN---VCHENLVKLHGGCIDGPCRILVYD 77
Q +VAVK + ++GEK + E +N + H N+V+ + +V +
Sbjct: 42 QSNELVAVKYI----ERGEK--IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME 95
Query: 78 YMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL 137
Y L + + +F R + G++Y H V HRD+K N LL
Sbjct: 96 YASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLL 148
Query: 138 DQNFNP--KISDFGLSKLFPENTTHISTR-VAGTLGYLAPEYAISGRLTRK-SDVYSFGV 193
D + P KI FG SK + H + GT Y+APE + K +DV+S GV
Sbjct: 149 DGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 194 LLLEIVSG 201
L ++ G
Sbjct: 206 TLYVMLVG 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 185 KSDVYSFGVLLLEIVS------GRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 210 NVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 126 VHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
HRD+K NIL+ + + DFG+ S E T + V GTL Y APE T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATY 214
Query: 185 KSDVYSFGVLLLEIVSG 201
++D+Y+ +L E ++G
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 20/194 (10%)
Query: 21 QDGTIVAVKVLSVES--KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDY 78
Q G + A+K+++ K+GE E + VN + +LH D LV +Y
Sbjct: 84 QTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-VNGDRRWITQLHFAFQDENYLYLVMEY 142
Query: 79 MPNNSLSQTLLGE--EKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL 136
L TLL + E+ A+ EI+M I +H + VHRDIK NIL
Sbjct: 143 YVGGDL-LTLLSKFGERIPAEMARFYLAEIVMAIDS----VH---RLGYVHRDIKPDNIL 194
Query: 137 LDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE-------YAISGRLTRKSDVY 189
LD+ + +++DFG + T S GT YL+PE +G + D +
Sbjct: 195 LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 190 SFGVLLLEIVSGRT 203
+ GV E+ G+T
Sbjct: 255 ALGVFAYEMFYGQT 268
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 100 WKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT 159
W R+ ++ LA++H + +VH D+K +NI L K+ DFGL L T
Sbjct: 160 WGYLRDTLLA----LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTA 210
Query: 160 HISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 199
G Y+APE + G +DV+S G+ +LE+
Sbjct: 211 GAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 200
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 201 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF---NPKISDFGLSKLFPENTTHIS 162
+I I G+ Y+H Q ++VH D+K NILL + + KI DFG+S+ H
Sbjct: 136 LIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHAC 188
Query: 163 T--RVAGTLGYLAPEYAISGRLTRKSDVYSFGVL 194
+ GT YLAPE +T +D+++ G++
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 106 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSK 152
++ I G+A++H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 120 LLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 153 LFPENTTHISTRV---AGTLGYLAPE-------YAISGRLTRKSDVYSFGVLLLEIVS 200
+ +GT G+ APE RLTR D++S G + I+S
Sbjct: 177 KLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 97 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 156
KF + ++ + GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 157 NTTHISTRVAG---TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVS 200
R TL Y PE + R D++ G ++ E+ +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILL----DQNFNPKISDFGLSKLF--PEN 157
+ ++ I G+ Y+H V+HRD+K +NIL+ + KI+D G ++LF P
Sbjct: 131 KSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 158 TTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSG 201
V T Y APE + R T+ D+++ G + E+++
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 221
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 97 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 156
KF + ++ + GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 176
Query: 157 NTTHISTRVAG---TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVS 200
R TL Y PE + R D++ G ++ E+ +
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 97 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 156
KF + ++ + GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 157 NTTHISTRVAG---TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVS 200
R TL Y PE + R D++ G ++ E+ +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQ-----NFNPKISDFGLSKLFPENTTHISTR--V 165
GLA++H ++VHRD+K NIL+ ISDFGL K S R V
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 166 AGTLGYLAPEY---AISGRLTRKSDVYSFGVLLLEIVS 200
GT G++APE T D++S G + ++S
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SGRLT 183
+HRD+K NIL+ ++ K+ DFG ++L + + VA T Y +PE + +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYG 181
Query: 184 RKSDVYSFGVLLLEIVSG 201
DV++ G + E++SG
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 195
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 196 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 191
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 192 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 206
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 207 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 97 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 156
KF + ++ + GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 157 NTTHISTRVAG---TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVS 200
R TL Y PE + R D++ G ++ E+ +
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 188
Query: 168 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 202
Y APE T DV+S G +L E++ G+
Sbjct: 189 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVS------GRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 30/115 (26%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL--FPEN------------- 157
G+ Y+H ++HRD+K +N L++Q+ + K+ DFGL++ +PEN
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 158 --------TTHISTRVAG---TLGYLAPEYA-ISGRLTRKSDVYSFGVLLLEIVS 200
T ++ ++ G T Y APE + T DV+S G + E+++
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 74 LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTS 133
LV++ M S+ L +R F ++ + L ++H + + HRD+K
Sbjct: 88 LVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPE 140
Query: 134 NILLDQ--NFNP-KISDFGLSKLFPEN--TTHIST----RVAGTLGYLAPEY--AISGRL 182
NIL + +P KI DFGL N + IST G+ Y+APE A S
Sbjct: 141 NILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 183 T---RKSDVYSFGVLLLEIVSG 201
+ ++ D++S GV+L ++SG
Sbjct: 201 SIYDKRCDLWSLGVILYILLSG 222
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 35/124 (28%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--------- 154
+ I+ + G +IHE ++HRD+K +N LL+Q+ + K+ DFGL++
Sbjct: 132 KTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188
Query: 155 ----------PEN-------TTHISTRVAGTLGYLAPEYA-ISGRLTRKSDVYSFGVLLL 196
P N T+H+ TR Y APE + T+ D++S G +
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFA 243
Query: 197 EIVS 200
E+++
Sbjct: 244 ELLN 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 112 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 167
R LAYIH + HRDIK N+LLD K+ DFG +K+ N + I +R
Sbjct: 152 RSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-- 206
Query: 168 TLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIVSGR 202
Y APE + T D++S G ++ E++ G+
Sbjct: 207 ---YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 125 VVHRDIKTSNILLD-QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL- 182
VVHRDIK NIL+D + K+ DFG L + T GT Y PE+ +
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEWISRHQYH 216
Query: 183 TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHL 216
+ V+S G+LL ++V G + D ++ E L
Sbjct: 217 ALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRD+K SNI++ + KI DFGL++ T+ + T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 185 KSDVYSFGVLLLEIVS------GRTAVD 206
D++S G ++ E+V GR +D
Sbjct: 205 NVDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGY 171
GL Y+H + +VH+DIK N+LL KIS G+++ L P G+ +
Sbjct: 121 GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 172 LAPEYA--ISGRLTRKSDVYSFGVLLLEIVSGRTAVDFD 208
PE A + K D++S GV L I +G + D
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 38/127 (29%)
Query: 104 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--------- 154
+ I+ + G +IHE ++HRD+K +N LL+Q+ + KI DFGL++
Sbjct: 134 KTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
Query: 155 -------------PEN-------TTHISTRVAGTLGYLAPEYA-ISGRLTRKSDVYSFGV 193
P N T+H+ TR Y APE + T D++S G
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGC 245
Query: 194 LLLEIVS 200
+ E+++
Sbjct: 246 IFAELLN 252
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 7 IRLEKVDLAPFIRLQD---GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 63
+RL + R++D G AVK + +E + E+ MA + +V L+
Sbjct: 99 LRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE-------LMACAGLTSPRIVPLY 151
Query: 64 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEE 120
G +GP + + + SL Q L+ E+ G + +G+ GL Y+H
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQ-LVKEQ------GCLPEDRALYYLGQALEGLEYLHSR 204
Query: 121 IQPHVVHRDIKTSNILLDQN-FNPKISDFGLS-KLFPEN---TTHISTRVAGTLGYLAPE 175
++H D+K N+LL + + + DFG + L P+ + + GT ++APE
Sbjct: 205 ---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 176 YAISGRLTRKSDVYSFGVLLLEIVSG 201
+ K DV+S ++L +++G
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 7 IRLEKVDLAPFIRLQD---GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 63
+RL + R++D G AVK + +E + E+ MA + +V L+
Sbjct: 80 LRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE-------LMACAGLTSPRIVPLY 132
Query: 64 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEE 120
G +GP + + + SL Q L+ E+ G + +G+ GL Y+H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQ-LVKEQ------GCLPEDRALYYLGQALEGLEYLHSR 185
Query: 121 IQPHVVHRDIKTSNILLDQN-FNPKISDFGLS-KLFPENTTH---ISTRVAGTLGYLAPE 175
++H D+K N+LL + + + DFG + L P+ + GT ++APE
Sbjct: 186 ---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 176 YAISGRLTRKSDVYSFGVLLLEIVSG 201
+ K DV+S ++L +++G
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN- 129
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 130 ---YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 125 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 184
++HRDIK NI++ ++F K+ DFG S + E T GT+ Y APE + G R
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFG-SAAYLERGKLFYT-FCGTIEYCAPE-VLMGNPYR 207
Query: 185 --KSDVYSFGVLLLEIV 199
+ +++S GV L +V
Sbjct: 208 GPELEMWSLGVTLYTLV 224
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 124 HVVHRDIKTSNILLDQ-NFNPKISDFGLS-KLFPE--NTTHISTRVAGTLGYLAPEYAIS 179
+V HRDIK N+L+++ + K+ DFG + KL P N +I +R Y APE
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFG 205
Query: 180 GR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKV 220
+ T D++S G + E++ G D G+ H + +V
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN- 129
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 130 ---YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN- 129
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 130 ---YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYL 172
L +H Q +VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 173 APEYAISGRLTRKS-----------DVYSFGVLLLEIVSGRT 203
PE +R++ DV+S G +L + G+T
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYL 172
L +H Q +VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 173 APEYAISGRLTRKS-----------DVYSFGVLLLEIVSGRT 203
PE +R++ DV+S G +L + G+T
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 25 IVAVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNN 82
I A+K +++E + + +E+A + + + +++L+ I +V + N
Sbjct: 54 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNI 112
Query: 83 SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN 142
L+ L +K+++ W+ R+ + + IH Q +VH D+K +N L+
Sbjct: 113 DLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGM- 164
Query: 143 PKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKS-----------DVYS 190
K+ DFG++ ++ P+ T+ + GT+ Y+ PE +R++ DV+S
Sbjct: 165 LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224
Query: 191 FGVLLLEIVSGRT 203
G +L + G+T
Sbjct: 225 LGCILYYMTYGKT 237
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN- 129
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 130 ---YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN- 129
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 130 ---YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYL 172
L +H Q +VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 173 APEYAISGRLTRKS-----------DVYSFGVLLLEIVSGRT 203
PE +R++ DV+S G +L + G+T
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 54 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 113
+ H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV--- 128
Query: 114 LAYIHEEIQPHVVHRDIKTSNI-LLDQNF-NPKIS--DFGLSKLFPENTTHISTRVAGTL 169
Y+H + + H D+K NI LLD+N NP+I DFG++ + GT
Sbjct: 129 -HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTP 182
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYL 172
L +H Q +VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 173 APEYAISGRLTRKS-----------DVYSFGVLLLEIVSGRT 203
PE +R++ DV+S G +L + G+T
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 114 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYL 172
L +H Q +VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 173 APEYAISGRLTRKS-----------DVYSFGVLLLEIVSGRT 203
PE +R++ DV+S G +L + G+T
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 265
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 54 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 113
+ H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV--- 121
Query: 114 LAYIHEEIQPHVVHRDIKTSNI-LLDQNF-NPKIS--DFGLSKLFPENTTHISTRVAGTL 169
Y+H + + H D+K NI LLD+N NP+I DFG++ + GT
Sbjct: 122 -HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTP 175
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 54 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 113
+ H N++ LH + +L+ + + L L +E + ++I+ G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV--- 142
Query: 114 LAYIHEEIQPHVVHRDIKTSNI-LLDQNF-NPKIS--DFGLSKLFPENTTHISTRVAGTL 169
Y+H + + H D+K NI LLD+N NP+I DFG++ + GT
Sbjct: 143 -HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTP 196
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 53 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 112
V H N++ LH + +L+ + + L L +E + I I
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILD 126
Query: 113 GLAYIHEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGT 168
G+ Y+H + + H D+K NI LLD+N + K+ DFGL+ + + GT
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGT 181
Query: 169 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNP------KISDFGLSKLFPENTTH-ISTRV 165
GL Y+H ++H DIK N+L++ +P KI+D G + + E+ T+ I TR
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR- 199
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
Y +PE + +D++S L+ E+++G
Sbjct: 200 ----EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 113 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNP------KISDFGLSKLFPENTTH-ISTRV 165
GL Y+H ++H DIK N+L++ +P KI+D G + + E+ T+ I TR
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR- 199
Query: 166 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
Y +PE + +D++S L+ E+++G
Sbjct: 200 ----EYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 54 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 113
+ H N++ LH + IL+ + + L L +E + E + I G
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNG 126
Query: 114 LAYIHEEIQPHVVHRDIKTSNI-LLDQNF-NP--KISDFGLSKLFPENTTHISTRVAGTL 169
+ Y+H + H D+K NI LLD+N P KI DFGL+ + + + GT
Sbjct: 127 VYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTP 181
Query: 170 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 201
++APE L ++D++S GV+ ++SG
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,396,660
Number of Sequences: 62578
Number of extensions: 252727
Number of successful extensions: 2438
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 1128
length of query: 229
length of database: 14,973,337
effective HSP length: 95
effective length of query: 134
effective length of database: 9,028,427
effective search space: 1209809218
effective search space used: 1209809218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)