Query 027018
Match_columns 229
No_of_seqs 115 out of 518
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:36:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027018.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027018hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0a_A Endoglucanase H; carboh 99.9 6E-26 2.1E-30 187.3 16.7 158 29-224 5-170 (178)
2 1wmx_A COG3291: FOG: PKD repea 96.8 0.1 3.6E-06 43.0 16.2 111 92-224 59-180 (205)
3 1wky_A Endo-beta-1,4-mannanase 94.6 2.6 8.8E-05 38.7 17.9 143 29-221 312-463 (464)
4 3f95_A Beta-glucosidase; beta- 93.3 2.1 7.3E-05 35.1 13.0 84 107-224 78-173 (193)
5 3gdb_A Endo-D, putative unchar 73.2 80 0.0027 31.7 15.0 96 55-169 557-654 (937)
6 3orj_A Sugar-binding protein; 56.1 3.7 0.00013 37.6 1.3 67 158-227 340-426 (439)
7 1uy4_A Endo-1,4-beta-xylanase 28.8 1.6E+02 0.0056 22.0 6.7 89 92-224 53-144 (145)
8 3o12_A Uncharacterized protein 28.2 2.4E+02 0.0081 22.8 8.9 24 191-222 185-208 (221)
9 2v73_A CBM40, putative EXO-alp 26.5 2.3E+02 0.008 22.8 7.4 97 116-226 71-178 (191)
10 2w91_A Endo-beta-N-acetylgluco 25.4 4.5E+02 0.015 25.1 13.6 127 57-224 408-536 (653)
11 4b1m_A Levanase; hydrolase, CB 24.0 2.5E+02 0.0086 21.7 10.7 13 155-167 129-141 (185)
12 2vtf_A Endo-beta-N-acetylgluco 23.7 4.8E+02 0.016 24.8 14.9 121 56-224 404-530 (626)
13 1od3_A Putative xylanase; hydr 21.3 2.8E+02 0.0097 21.3 7.4 61 92-166 75-139 (168)
No 1
>1v0a_A Endoglucanase H; carbohydrate binding module, cellulosome, cellulose degradation, hydrolase, glycosidase; 1.98A {Clostridium thermocellum} SCOP: b.18.1.30
Probab=99.94 E-value=6e-26 Score=187.26 Aligned_cols=158 Identities=16% Similarity=0.234 Sum_probs=116.5
Q ss_pred CCccEEEecCCcccccCeEEecCceecceeEEEEEEeeCCCccEEEEEEEEecccCCCCccccc-CcceeEeeecCCCCC
Q 027018 29 PSERYIFNFNSKEELKKWHLYSDSEYGGLSSASLEITESGNGMNGIFSGNLSLDLSEGSKWNIS-RSGFCGMRSKKFDGF 107 (229)
Q Consensus 29 ~~~~~l~~F~~~~~~~~W~~~~D~vmGG~S~s~~~~~~~~~g~~~~F~G~ls~e~p~~~~~~ln-~gGFasvr~~~~~~~ 107 (229)
..+++|++|..+. .|..++|. |.|.+ +.+.+.. ..+.++||++ | +|||+|||... .+
T Consensus 5 ~~~~~i~df~~~~---~W~~v~Ds---~~s~s-~~~~~g~----~~~~l~VS~~---------N~nGGF~svr~n~--~~ 62 (178)
T 1v0a_A 5 VGEKMLDDFEGVL---NWGSYSGE---GAKVS-TKIVSGK----TGNGMEVSYT---------GTTDGYWGTVYSL--PD 62 (178)
T ss_dssp BSEEEEECSSSSC---CCEEEEET---TCEEE-EEEEECS----SSEEEEEEEE---------CCSSCEEEEEEEC--SC
T ss_pred ccCcceecCCCCC---ceEEEcCC---CcEEE-EEEecCc----eeeEEEEEEe---------cCCCCEEEEEcCC--CC
Confidence 4566788886554 89999994 33333 5554421 3344499999 8 99999999764 67
Q ss_pred CCCCCCCeEEEEEee---cCcEEEEEEEecCCcCCCCCCCCCceEEEEEcCCCCeEEEEEeCCCceeeccccccCCC---
Q 027018 108 IDLDSYDTIAMKLKG---DGRCYISTIYTENWVNSPGQQEDNSWQSFVFVPKDNWYIAKIPLARYLPTWRGNVIDAE--- 181 (229)
Q Consensus 108 ~dls~y~gi~lrvrG---DGr~Y~~~l~~~~~~~~~~~~~~~~yq~~~~t~~g~W~tv~iPFs~F~~~~rG~~~~~~--- 181 (229)
.|++.|+||+|+|+| +|++|+|.||+....- ..+...|++. |++...|++|+|||++|. +|.+.++..
T Consensus 63 ~d~s~~~GI~l~vkG~~~nG~~y~~~LR~~~~~~---~~~~~~y~~s-F~t~~~W~~IeIPFs~F~--~r~~~~P~~~~~ 136 (178)
T 1v0a_A 63 GDWSKWLKISFDIKSVDGSANEIRFMIAEKSING---VGDGEHWVYS-ITPDSSWKTIEIPFSSFR--RRLDYQPPGQDM 136 (178)
T ss_dssp CCCTTCCEEEEEEEEC---CCCEEEEEEEECTTS---SSEEEEEEEE-ECCCSSCEEEEEEGGGCE--ECCSCCCTTCCC
T ss_pred CCHhHCCcEEEEEEcCCCCCCEEEEEEeeCCCCC---CCCCeeEEEE-ecCCCcCEEEEEEHHHhc--cccccCCCCccc
Confidence 999999999999999 6999999999975420 0123566654 555588999999999999 444433332
Q ss_pred -CCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEEec
Q 027018 182 -MEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKALRS 224 (229)
Q Consensus 182 -~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~~~ 224 (229)
.+||+++|++|+||+.. ..+|. |.|++|+.|..
T Consensus 137 ~~~~d~~~i~si~~m~G~--------~~~g~--~~id~I~l~~~ 170 (178)
T 1v0a_A 137 SGTLDLDNIDSIHFMYAN--------NKSGK--FVVDNIKLIGA 170 (178)
T ss_dssp CSSCCTTSEEEEEEEESS--------SCCEE--EEEEEEEEECB
T ss_pred CCCcChhHeEEEEEEEcC--------CCcce--EEEEEEEEEee
Confidence 38999999999999752 34454 89999999864
No 2
>1wmx_A COG3291: FOG: PKD repeat; CBM30, carbohydrate binding module family30, CELJ, sugar BIN protein; 2.00A {Clostridium thermocellum} SCOP: b.18.1.24 PDB: 1wzx_A 2c24_A
Probab=96.79 E-value=0.1 Score=43.02 Aligned_cols=111 Identities=19% Similarity=0.177 Sum_probs=76.9
Q ss_pred cCcceeEeeecCC-CCCCCCCCCC---eEEEEEeec--CcEEEEEEEecCCcCCCCCCCCCceEEEE-----EcCCCCeE
Q 027018 92 SRSGFCGMRSKKF-DGFIDLDSYD---TIAMKLKGD--GRCYISTIYTENWVNSPGQQEDNSWQSFV-----FVPKDNWY 160 (229)
Q Consensus 92 n~gGFasvr~~~~-~~~~dls~y~---gi~lrvrGD--Gr~Y~~~l~~~~~~~~~~~~~~~~yq~~~-----~t~~g~W~ 160 (229)
++.|+.++-..+- -...||+.|- +|+|-+||. |..+.+.+.++... + ..+..-|... .+.+-+||
T Consensus 59 ~~~~w~~~~~~l~~w~~~DLs~y~~nG~leF~IKG~~GGE~~~ig~~D~~~e-~---~~g~~~~~~~~~~~yi~VttEwQ 134 (205)
T 1wmx_A 59 VQSGWWISLLTLRGWNTHDLSQYVENGYLEFDIKGKEGGEDFVIGFRDKVYE-R---VYGLEIDVTTVISNYVTVTTDWQ 134 (205)
T ss_dssp CCSSCEEEEEESSTTSCBCCGGGTTTCEEEEEEEESSSCCCCEEEEEECCTT-C---TTCSSCEEEEEGGGTCCCCSSCE
T ss_pred ccCceeEEEEeccCcceeehhhhhcCCeEEEEEecccCceeEEEEEeccccc-c---cCCceeEEEeechheEEeccccE
Confidence 6889988766542 2467898885 899999985 79999999987332 2 1233444332 23455899
Q ss_pred EEEEeCCCceeeccccccCCCCCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEEec
Q 027018 161 IAKIPLARYLPTWRGNVIDAEMEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKALRS 224 (229)
Q Consensus 161 tv~iPFs~F~~~~rG~~~~~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~~~ 224 (229)
-|.||+.+| .. . ...+++.++.. |.+.. ...+||++-|+.|+....
T Consensus 135 HvsiPLkdF-M~-e------~td~dpr~~~~--fnlgk--------~~~~phtVwIDNIkLts~ 180 (205)
T 1wmx_A 135 HVKIPLRDL-MK-I------NNGFDPSSVTC--LVFSK--------RYADPFTVWFSDIKITSE 180 (205)
T ss_dssp EEEEEGGGT-SC-S------TTCCCTTSEEE--EEEEC--------SSSCCEEEEEEEEEEECC
T ss_pred EEEeeHHHh-cc-c------cCCcCcccceE--EEecC--------CCCCceEEEEeeEEEEec
Confidence 999999999 22 1 23566766554 44442 468999999999987644
No 3
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=94.62 E-value=2.6 Score=38.70 Aligned_cols=143 Identities=17% Similarity=0.189 Sum_probs=90.0
Q ss_pred CCccEEEecCCcccccCeEEecCceecceeEEEEEEeeCCCccEEEEEEEEecccCCCCcccccCcceeEeeecCCCCCC
Q 027018 29 PSERYIFNFNSKEELKKWHLYSDSEYGGLSSASLEITESGNGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFI 108 (229)
Q Consensus 29 ~~~~~l~~F~~~~~~~~W~~~~D~vmGG~S~s~~~~~~~~~g~~~~F~G~ls~e~p~~~~~~ln~gGFasvr~~~~~~~~ 108 (229)
++..++++|.+.. +.|..-+ .++|...+... ..+| .....+.+.+. ++.+| .+... ...
T Consensus 312 ~~~~~~~df~~~~--~~w~~~~--~~~g~~~~~~~---~~~g-~~sl~~~~~~~---------~~~~~-~~~~~---~~~ 370 (464)
T 1wky_A 312 TSPTTLYDFEEST--QGWTGSS--LSRGPWTVTEW---SSKG-NHSLKADIQMS---------SNSQH-YLHVI---QNR 370 (464)
T ss_dssp --CEEEECCSSSC--TTEEEES--CSEEEEEESSC---CSST-TCEEEEEEEEC---------TTCEE-EEEEE---EEE
T ss_pred CCCcccccccCCC--ccccccc--ccCCceeeccc---cccC-ceeEeeeeeec---------CCCce-EEEEe---ecc
Confidence 5567899998763 7898544 23443222111 1123 24555666555 45666 34443 568
Q ss_pred CCCCCCeEEEEEeec-------CcEEEEEEEecCCcCCCCCCCCCceEEE--EEcCCCCeEEEEEeCCCceeeccccccC
Q 027018 109 DLDSYDTIAMKLKGD-------GRCYISTIYTENWVNSPGQQEDNSWQSF--VFVPKDNWYIAKIPLARYLPTWRGNVID 179 (229)
Q Consensus 109 dls~y~gi~lrvrGD-------Gr~Y~~~l~~~~~~~~~~~~~~~~yq~~--~~t~~g~W~tv~iPFs~F~~~~rG~~~~ 179 (229)
||++++.|.++|+-. |-+=+|-++|...+ .|.-. ....+++|.++.|+|+.-
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~~~~~---------~w~~~~~~~i~~~~~~~l~~~l~~~---------- 431 (464)
T 1wky_A 371 SLQQNSRIQATVKHANWGSVGNGMTARLYVKTGHGY---------TWYSGSFVPINGSSGTTLSLDLSNV---------- 431 (464)
T ss_dssp CCTTCCEEEEEEEEC-------CEEEEEEEEETTTT---------EEEECCCEEECSSSCEEEEEECTTC----------
T ss_pred CCCCcceEEEEEEeccCCCCCCCeeEEEEEEeCCCc---------eEecCCceEecCCCceEEEEEcccC----------
Confidence 999999999999733 45667777875332 23321 233456899999999432
Q ss_pred CCCCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEE
Q 027018 180 AEMEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKA 221 (229)
Q Consensus 180 ~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a 221 (229)
-|++.|+.+||.+.... ...|.-.+-||+|.+
T Consensus 432 ----~~~~~~~~~gv~~~~~~------~~~~~~~~yvd~v~~ 463 (464)
T 1wky_A 432 ----QNLSQVREIGVQFQSES------NSSGQTSIYIDNVIV 463 (464)
T ss_dssp ----SCGGGEEEEEEEEEECT------TCCEEEEEEEEEEEE
T ss_pred ----cchhhhhhEEEEEEcCC------CCCcceEEEEEEEEe
Confidence 16789999999998621 235788999999975
No 4
>3f95_A Beta-glucosidase; beta-sandwich, hydrolase; 1.80A {Pseudoalteromonas SP}
Probab=93.28 E-value=2.1 Score=35.07 Aligned_cols=84 Identities=11% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCCCCCCC--eEEEEEeecC---cEEEEEEEecCCcCCCCCCCCCceEEEE-E------cCCCCeEEEEEeCCCceeecc
Q 027018 107 FIDLDSYD--TIAMKLKGDG---RCYISTIYTENWVNSPGQQEDNSWQSFV-F------VPKDNWYIAKIPLARYLPTWR 174 (229)
Q Consensus 107 ~~dls~y~--gi~lrvrGDG---r~Y~~~l~~~~~~~~~~~~~~~~yq~~~-~------t~~g~W~tv~iPFs~F~~~~r 174 (229)
+.| +.|. .|.|++|-|- ..-.+.+.|... . -...+ . .+.|+|+++.||++- ...
T Consensus 78 ~~D-s~y~~~aL~fd~rvd~ap~~~v~L~m~Cg~~--------~--C~~~vdit~~L~~~~~g~W~tv~IpL~C-a~~-- 143 (193)
T 3f95_A 78 PLD-SKFSTGYLELKMRIDKAPEQGANLQVMCSES--------N--CLRDIDFSSFSQLMADKSWHTLAIPLHC-DDS-- 143 (193)
T ss_dssp ECC-GGGTTCEEEEEEEEEECCTTCEEEEEEECSS--------C--EEEEEEGGGTHHHHTTCCCEEEEEESCC------
T ss_pred CcC-ChhhCceEEEEEEeecCCCCcEEEEEecCCC--------C--ccceeehhHhhhhccCCCCEEEEEeCcc-ccc--
Confidence 456 6664 4888887552 456777777521 0 11222 1 256899999999998 443
Q ss_pred ccccCCCCCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEEec
Q 027018 175 GNVIDAEMEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKALRS 224 (229)
Q Consensus 175 G~~~~~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~~~ 224 (229)
-.|+++|.+- |.+.. . ++.|.|..|+....
T Consensus 144 --------G~D~s~V~~P-f~L~t----------~-~~~lsianIrl~~~ 173 (193)
T 3f95_A 144 --------DQAEQPITDA-LRITS----------Q-NLSLAIADVALTIK 173 (193)
T ss_dssp ------------CEEEEE-EEEEE----------S-SEEEEEEEEEEESS
T ss_pred --------CCCHHHcCCc-cEEEe----------C-CcEEEEEEEEEecC
Confidence 3666666654 55553 3 89999999998654
No 5
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=73.23 E-value=80 Score=31.71 Aligned_cols=96 Identities=18% Similarity=0.273 Sum_probs=54.7
Q ss_pred cceeEEEEEEeeCC-CccEEEEEEEEecccCCCCcccccCcceeEeeecCCCCCCCCCCCCeEEEEEeec-CcEEEEEEE
Q 027018 55 GGLSSASLEITESG-NGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGD-GRCYISTIY 132 (229)
Q Consensus 55 GG~S~s~~~~~~~~-~g~~~~F~G~ls~e~p~~~~~~ln~gGFasvr~~~~~~~~dls~y~gi~lrvrGD-Gr~Y~~~l~ 132 (229)
|+.-++.+++.+.- .|.+++|+|.|.. .+...+|. |...+.+..-.-|.+.+|++ +-.-.+.|.
T Consensus 557 g~~l~~~~d~~DAy~GGSSL~l~G~l~~------------~~~~~irL--Fkt~L~v~~~~~l~l~~K~~~~s~l~l~L~ 622 (937)
T 3gdb_A 557 GEKLRAEYDFTDAYNGGNSLKFSGDVAG------------KTDQDVRL--YSTKLEVTEKTKLRVAHKGGKGSKVYMAFS 622 (937)
T ss_dssp SCCCEEEEESSCCSSBSCEEEEEEEECS------------SEEEEEEE--EEEEEECCTTCEEEEEEEECTTSEEEEEEE
T ss_pred CCceEEEEecccccCCcceEEEEEEcCC------------CCceeEEE--EeecccCCCCCEEEEEEecCCCceEEEEEE
Confidence 34455666654321 2457999999853 33344443 32334455545588888875 556777776
Q ss_pred ecCCcCCCCCCCCCceEEEEEcCCCCeEEEEEeCCCc
Q 027018 133 TENWVNSPGQQEDNSWQSFVFVPKDNWYIAKIPLARY 169 (229)
Q Consensus 133 ~~~~~~~~~~~~~~~yq~~~~t~~g~W~tv~iPFs~F 169 (229)
+...... .....|. ..+..++|+++.+++++|
T Consensus 623 ~~~~~~~---~~~~~~~--~~~~~~~Wt~~t~dLs~l 654 (937)
T 3gdb_A 623 TTPDYKF---DDADAWK--ELTLSDNWTNEEFDLSSL 654 (937)
T ss_dssp CSTTCCC---CCGGGEE--ECCCEEEEEEEEEECGGG
T ss_pred cCCCcee---ccccccc--ccccCCCcEEEEEEcccc
Confidence 6422100 0112343 234566899999998877
No 6
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=56.07 E-value=3.7 Score=37.61 Aligned_cols=67 Identities=10% Similarity=0.307 Sum_probs=37.0
Q ss_pred CeEEEEEeCCCceeeccccccCCC-CCC-------CccCeeEEEEEEE--e--CCCCCCC--C------cCCeeEEEEEe
Q 027018 158 NWYIAKIPLARYLPTWRGNVIDAE-MEM-------NPSRVVGMSLSVN--A--EGGVPGA--K------SGPGDFRVEVD 217 (229)
Q Consensus 158 ~W~tv~iPFs~F~~~~rG~~~~~~-~~l-------~~~~I~~ig~~~~--~--~~g~~~~--~------~~~G~F~LeI~ 217 (229)
.||||.|||+.|. +.+..... +.+ +.+.-+.+|+.+. | ++++-++ + ...-.-++-||
T Consensus 340 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (439)
T 3orj_A 340 GWQTVTVPFSEFY---KSKASSGAWTTFADVTATRASASYANFGFYFENSDITLDKITGASSDKETEFLSKATSVKIYID 416 (439)
T ss_dssp SCEEEEEEGGGSG---GGGCSSSCCCBHHHHHHHHHHCSCCCCEEEEEECCEETTTTSCTTTTTTCEECCCCBCCCEEEE
T ss_pred CceEEEeehHHhh---cccccccccchHHhhhhcccccchhccceeEeecceeecccccccccccchhhccceeeEEEee
Confidence 4999999999993 33322211 111 1234445555443 3 4444222 1 12344578889
Q ss_pred EEEEEecCCC
Q 027018 218 WIKALRSELP 227 (229)
Q Consensus 218 ~I~a~~~~~~ 227 (229)
..++++...|
T Consensus 417 ~~~~~~~~~~ 426 (439)
T 3orj_A 417 NWRVVPLTKP 426 (439)
T ss_dssp EEEEEECCCC
T ss_pred eeEEEecccc
Confidence 9998877655
No 7
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=28.85 E-value=1.6e+02 Score=22.04 Aligned_cols=89 Identities=12% Similarity=0.102 Sum_probs=50.2
Q ss_pred cCcceeEeeecCCCCCCCCCCCCeEEEEEeecCcEEEEEEEecCCcCCCCCCCCCce-EEEEEcCCC--CeEEEEEeCCC
Q 027018 92 SRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDGRCYISTIYTENWVNSPGQQEDNSW-QSFVFVPKD--NWYIAKIPLAR 168 (229)
Q Consensus 92 n~gGFasvr~~~~~~~~dls~y~gi~lrvrGDGr~Y~~~l~~~~~~~~~~~~~~~~y-q~~~~t~~g--~W~tv~iPFs~ 168 (229)
.+|.|+..+.-.+. +....|.+||.+.+ ...|.|+.+... .... ...+-.+.+ .|+++..+++.
T Consensus 53 ~~G~wi~y~~vdf~-----~G~~~~~~rvas~~-gg~ievrlds~~-------G~~lgt~~v~~Tggw~~w~tv~~~v~~ 119 (145)
T 1uy4_A 53 ENGNTVTYSNIDFG-----SGATGFSATVATEV-NTSIQIRSDSPT-------GTLLGTLYVSSTGSWNTYNTVSTNISK 119 (145)
T ss_dssp CTTCEEEEEEEECT-----TCEEEEEEEEECSS-CEEEEEEESSTT-------SCEEEEEEECCCSSTTCCEEEEEEEEE
T ss_pred CCCCEEEEEEEEcC-----CCCEEEEEEEEeCC-CcEEEEEECCCC-------CcEEEEEEecCCCCCcccEEEEEEecC
Confidence 46788777643221 35667888887654 357888776421 1222 222222332 68888877431
Q ss_pred ceeeccccccCCCCCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEEec
Q 027018 169 YLPTWRGNVIDAEMEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKALRS 224 (229)
Q Consensus 169 F~~~~rG~~~~~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~~~ 224 (229)
+.-++.|-|.+. |. +.|+|+.+-++
T Consensus 120 -----------------~~G~h~lyl~f~------------g~--~nl~~~~F~~~ 144 (145)
T 1uy4_A 120 -----------------ITGVHDIVLVFS------------GP--VNVDNFIFSRS 144 (145)
T ss_dssp -----------------ECSEEEEEEEES------------SC--CEEEEEEEEEC
T ss_pred -----------------CCceEEEEEEEe------------CC--eEEEEEEEEeC
Confidence 123566677653 22 67788887653
No 8
>3o12_A Uncharacterized protein YJL217W; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.50A {Saccharomyces cerevisiae}
Probab=28.15 E-value=2.4e+02 Score=22.82 Aligned_cols=24 Identities=8% Similarity=-0.021 Sum_probs=17.8
Q ss_pred EEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEE
Q 027018 191 GMSLSVNAEGGVPGAKSGPGDFRVEVDWIKAL 222 (229)
Q Consensus 191 ~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~ 222 (229)
.+||.+.+ .....+...++++..-
T Consensus 185 ~vGl~a~s--------p~~~g~~a~Fd~F~~~ 208 (221)
T 3o12_A 185 LVGPMACT--------PERGGLKVTFSEWSLT 208 (221)
T ss_dssp EEEEEEEC--------SSSCCCEEEEEEEEEE
T ss_pred EEEEEEEC--------CCCCCcEEEEEEEEEc
Confidence 58999986 3345677888888764
No 9
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=26.48 E-value=2.3e+02 Score=22.76 Aligned_cols=97 Identities=5% Similarity=0.036 Sum_probs=50.7
Q ss_pred EEEEEeecCcEEEEEEEecCCcCCCCCCCCCceEEEE-E--cCCCCeEEEEEeCCC---ceeeccccccCCC--CCC-Cc
Q 027018 116 IAMKLKGDGRCYISTIYTENWVNSPGQQEDNSWQSFV-F--VPKDNWYIAKIPLAR---YLPTWRGNVIDAE--MEM-NP 186 (229)
Q Consensus 116 i~lrvrGDGr~Y~~~l~~~~~~~~~~~~~~~~yq~~~-~--t~~g~W~tv~iPFs~---F~~~~rG~~~~~~--~~l-~~ 186 (229)
+.|-|+ +| +..+.+|.... ...|.... . ...++|.+|.+-.+. ++.+--|..+... +.. -.
T Consensus 71 f~lyi~-~g-~lg~e~R~~~~--------~~~~~~~~~a~v~~~~~wntvaf~~d~~~~~~ly~NG~~V~t~~~~~~~fi 140 (191)
T 2v73_A 71 FSLYVS-GG-KVGYELRRQEG--------NGDFNVHHSADVTFNRGINTLALKIEKGIGAKIFLNGSLVKTVSDPNIKFL 140 (191)
T ss_dssp EEEEEC-SS-EEEEEEEECTT--------SSCEEEEEEEECCCCSSCEEEEEEEETTTEEEEEETTEEEEEEECTTCCCG
T ss_pred EEEEEe-CC-EEEEEEecCCC--------ceeeeeecccceecCCceEEEEEEEcCCccEEEEECCEEEEEEecccccce
Confidence 333344 44 77777777532 23343211 1 123589888887753 4444556654322 100 11
Q ss_pred c--CeeEEEEEEEeCCCCCCCCcCCeeEEEEEeEEEEEecCC
Q 027018 187 S--RVVGMSLSVNAEGGVPGAKSGPGDFRVEVDWIKALRSEL 226 (229)
Q Consensus 187 ~--~I~~ig~~~~~~~g~~~~~~~~G~F~LeI~~I~a~~~~~ 226 (229)
+ .+..+.|....+. ...-.-+|..+|+.+..|+.+.
T Consensus 141 ~~i~ln~~~IG~~~r~----sg~~~y~F~G~Id~~~iYn~aL 178 (191)
T 2v73_A 141 NAINLNSGFIGKTDRA----NGYNEYLFRGNIDFMNIYDKPV 178 (191)
T ss_dssp GGSCCCEEEESSCCCC----SSSCCCCCCEEEEEEEEESSCC
T ss_pred eecCCceEEEcceeec----CCceeeccCCeEEEEEEEcCcC
Confidence 2 3334444322211 0124579999999999998764
No 10
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Probab=25.44 E-value=4.5e+02 Score=25.10 Aligned_cols=127 Identities=14% Similarity=0.221 Sum_probs=67.7
Q ss_pred eeEEEEEEeeCC-CccEEEEEEEEecccCCCCcccccCcceeEeeecCCCCCCCCCCCCeEEEEEeecC-cEEEEEEEec
Q 027018 57 LSSASLEITESG-NGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDG-RCYISTIYTE 134 (229)
Q Consensus 57 ~S~s~~~~~~~~-~g~~~~F~G~ls~e~p~~~~~~ln~gGFasvr~~~~~~~~dls~y~gi~lrvrGDG-r~Y~~~l~~~ 134 (229)
.-++.++..+.= .|.++.++|.|.. +....++. +...+++..-.-+.+.+|+++ -.-.+.|...
T Consensus 408 ~l~~~~~~~dAy~GGssL~l~G~l~~------------~~~~~v~L--f~t~l~~~~~~~~~~~~K~~~~s~~~l~L~~~ 473 (653)
T 2w91_A 408 KLRAEYDFTDAYNGGNSLKFSGDVAG------------KTDQDVRL--YSTKLEVTEKTKLRVAHKGGKGSKVYMAFSTT 473 (653)
T ss_dssp CCEEEEESSSCSSBSCEEEEEEEECS------------SEEEEEEE--EEEEEECCTTCEEEEEEEECTTSEEEEEEECS
T ss_pred ceeEEEEecccccCCceEEEEeecCC------------CCceEEEe--EEecccCCCCcEEEEEEEcCCCceeEEEEEec
Confidence 334555543211 2457999998743 22223332 322344444445777777764 5677777766
Q ss_pred CCcCCCCCCCCCceEEEEEcCCCCeEEEEEeCCCceeeccccccCCCCCCCccCeeEEEEEEEeCCCCCCCCcCCeeEEE
Q 027018 135 NWVNSPGQQEDNSWQSFVFVPKDNWYIAKIPLARYLPTWRGNVIDAEMEMNPSRVVGMSLSVNAEGGVPGAKSGPGDFRV 214 (229)
Q Consensus 135 ~~~~~~~~~~~~~yq~~~~t~~g~W~tv~iPFs~F~~~~rG~~~~~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~G~F~L 214 (229)
.... ......| .-.+..++|++..+.++.+ .|+ .|..|||.+.+ ....-+|.+
T Consensus 474 ~~~~---~~~~~~~--~~~~~~~~W~~~~~~ls~~----~G~-----------~i~~I~l~~~~-------~~~~~~y~~ 526 (653)
T 2w91_A 474 PDYK---FDDADAW--KELTLSDNWTNEEFDLSSL----AGK-----------TIYAVKLFFEH-------EGAVKDYQF 526 (653)
T ss_dssp TTCC---CCCGGGE--EECCCEEEEEEEEEECGGG----TTC-----------EEEEEEEEEEE-------SSCEEEEEE
T ss_pred CCce---ecccccc--cCCcCCCCcEEEEEEeccc----CCC-----------EeeeEEEEEeC-------CCCccceeE
Confidence 2110 0000111 1123456899999988744 232 37788888875 122356777
Q ss_pred EEeEEEEEec
Q 027018 215 EVDWIKALRS 224 (229)
Q Consensus 215 eI~~I~a~~~ 224 (229)
-|=.|..++.
T Consensus 527 ~lG~l~i~~~ 536 (653)
T 2w91_A 527 NLGQLTISDN 536 (653)
T ss_dssp EEEEEEEESC
T ss_pred EEeeEEEeCC
Confidence 7777776543
No 11
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=24.02 E-value=2.5e+02 Score=21.68 Aligned_cols=13 Identities=15% Similarity=0.064 Sum_probs=8.6
Q ss_pred CCCCeEEEEEeCC
Q 027018 155 PKDNWYIAKIPLA 167 (229)
Q Consensus 155 ~~g~W~tv~iPFs 167 (229)
++++|-+++|-..
T Consensus 129 ~~g~w~~l~I~~~ 141 (185)
T 4b1m_A 129 DVNKKYHLKTEAE 141 (185)
T ss_dssp CSSCCEEEEEEEE
T ss_pred CCCCeEEEEEEEE
Confidence 3567877777654
No 12
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=23.67 E-value=4.8e+02 Score=24.78 Aligned_cols=121 Identities=12% Similarity=0.200 Sum_probs=71.8
Q ss_pred ceeEEEEEEeeCC-CccEEEEEEEEecccCCCCcccccCcceeEeeecCCCCCCCCCCCCeEEEEEeecC-cEEEEEEEe
Q 027018 56 GLSSASLEITESG-NGMNGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFIDLDSYDTIAMKLKGDG-RCYISTIYT 133 (229)
Q Consensus 56 G~S~s~~~~~~~~-~g~~~~F~G~ls~e~p~~~~~~ln~gGFasvr~~~~~~~~dls~y~gi~lrvrGDG-r~Y~~~l~~ 133 (229)
+.-++.++..+.= .|.++.++|.|.. +..+.++. +...+.+..-.-+.+.+|.++ -.-.+.|..
T Consensus 404 ~~l~~~~~~~dAy~GGssL~l~G~l~~------------~~~~~~~L--f~t~l~~~~~~~~~~~~K~~~~s~l~l~l~~ 469 (626)
T 2vtf_A 404 GDLEATFSWEEAFEGGSSLQWHGSLAE------------GEHAQIEL--YQTELPISEGTSLTWTFKSEHGNDLNVGFRL 469 (626)
T ss_dssp SEEEEEEESSCCSSBSCEEEEEEECCT------------TCEEEEEE--EEEEEECCTTCEEEEEEEETTCCCCEEEEEE
T ss_pred CcceEEEEecccccCcceEEEEeecCC------------CCceEEEE--EEecccCCCCCEEEEEEEcCCCceEEEEEEE
Confidence 3444555553321 2457999998743 23333332 323344555556788888765 456677776
Q ss_pred cCCcCCCCCCCCCceEEEEE---cCC-CCeEEEEEeCCCceeeccccccCCCCCCCccCeeEEEEEEEeCCCCCCCCcCC
Q 027018 134 ENWVNSPGQQEDNSWQSFVF---VPK-DNWYIAKIPLARYLPTWRGNVIDAEMEMNPSRVVGMSLSVNAEGGVPGAKSGP 209 (229)
Q Consensus 134 ~~~~~~~~~~~~~~yq~~~~---t~~-g~W~tv~iPFs~F~~~~rG~~~~~~~~l~~~~I~~ig~~~~~~~g~~~~~~~~ 209 (229)
.+.. ..| .+- +.. ++|++..++++.+ .| ..|..|||.+.. ..+
T Consensus 470 ~~~~--------~~~--~~~~~~~~~~~~W~~~~~~ls~~----~G-----------~~i~~I~l~~~~--------~~~ 516 (626)
T 2vtf_A 470 DGEE--------DFR--YVEGEQRESINGWTQWTLPLDAF----AG-----------QTITGLAFAAEG--------NET 516 (626)
T ss_dssp TTCS--------SCE--EECCCEEEEETTEEEEEEECGGG----TT-----------CEEEEEEEEEEC--------CTT
T ss_pred CCCC--------cee--EeecCCccCCCCcEEEEEEeccc----CC-----------CEeeeEEEEEec--------CCC
Confidence 5421 223 111 123 7899999999844 23 247899999984 222
Q ss_pred eeEEEEEeEEEEEec
Q 027018 210 GDFRVEVDWIKALRS 224 (229)
Q Consensus 210 G~F~LeI~~I~a~~~ 224 (229)
-+|.+-|=.|.. +.
T Consensus 517 ~~y~~~lG~l~i-~~ 530 (626)
T 2vtf_A 517 GLAEFYIGQLAV-GA 530 (626)
T ss_dssp CEEEEEEEEEEE-EC
T ss_pred cceEEEEEEEEe-CC
Confidence 688888888887 44
No 13
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=21.25 E-value=2.8e+02 Score=21.29 Aligned_cols=61 Identities=3% Similarity=-0.001 Sum_probs=34.8
Q ss_pred cCcceeEeeecCCCCCCCC-CCCCeEEEEEeecCcEEEEEEEecCCcCCCCCCCCCceEEEEEcCCC---CeEEEEEeC
Q 027018 92 SRSGFCGMRSKKFDGFIDL-DSYDTIAMKLKGDGRCYISTIYTENWVNSPGQQEDNSWQSFVFVPKD---NWYIAKIPL 166 (229)
Q Consensus 92 n~gGFasvr~~~~~~~~dl-s~y~gi~lrvrGDGr~Y~~~l~~~~~~~~~~~~~~~~yq~~~~t~~g---~W~tv~iPF 166 (229)
.+|.|+..+.- |+ ++-..|.+||.+.+ ...+.|+.+... ...--...+..+| .|+++..++
T Consensus 75 ~~G~wl~y~~v------dfg~G~~~~~~rvas~~-~G~ievrlds~~-------G~~lgt~~vp~Tggw~~w~tvt~~v 139 (168)
T 1od3_A 75 ENGYSTTYKNI------DFGDGATSVTARVATQN-ATTIQVRLGSPS-------GTLLGTIYVGSTGSFDTYRDVSATI 139 (168)
T ss_dssp CTTCEEEEEEE------ECTTCEEEEEEEEECSS-CEEEEEEESSTT-------SCEEEEEEECCCSSTTCCEEEEEEE
T ss_pred cCCCEEEEEeE------EeCCCcEEEEEEEEcCC-CcEEEEEECCCC-------CcEEEEEEeCCCCCCcccEEEEEEE
Confidence 46777766642 33 35667888887655 357788776421 2222211233333 788888764
Done!