Query 027024
Match_columns 229
No_of_seqs 194 out of 1637
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 05:46:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 8.8E-38 3E-42 295.1 19.9 187 2-208 1-196 (553)
2 1ao0_A Glutamine phosphoribosy 100.0 1.1E-35 3.9E-40 275.1 18.5 202 2-221 1-252 (459)
3 1xff_A D-fructose-6-, glucosam 100.0 2.3E-34 7.7E-39 245.5 21.7 182 2-205 1-225 (240)
4 1ecf_A Glutamine phosphoribosy 100.0 2E-31 7E-36 249.1 23.4 205 2-222 1-269 (504)
5 2bpl_A Glucosamine--fructose-6 100.0 3.5E-31 1.2E-35 252.5 18.6 183 2-204 1-224 (608)
6 1jgt_A Beta-lactam synthetase; 100.0 1.2E-28 4.2E-33 230.8 16.3 148 38-208 40-213 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 2.9E-27 9.9E-32 221.0 8.4 145 51-208 26-208 (503)
8 3mdn_A Glutamine aminotransfer 99.9 2E-25 6.8E-30 193.8 14.1 143 53-204 83-257 (274)
9 1te5_A Conserved hypothetical 99.9 2.2E-23 7.4E-28 179.4 1.5 176 1-200 1-252 (257)
10 1ea0_A Glutamate synthase [NAD 99.6 4.9E-15 1.7E-19 150.4 11.7 138 52-197 203-396 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.5 4.2E-14 1.4E-18 143.9 13.2 138 52-197 199-395 (1520)
12 1vk9_A Conserved hypothetical 32.1 12 0.00039 29.0 0.4 27 129-158 27-53 (151)
13 4afx_B Protein Z dependent pro 22.0 1.1E+02 0.0037 17.1 3.4 21 128-148 8-29 (36)
14 2riv_B Thyroxine-binding globu 21.3 1.2E+02 0.0043 17.3 3.6 21 128-148 12-33 (40)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=8.8e-38 Score=295.07 Aligned_cols=187 Identities=23% Similarity=0.410 Sum_probs=159.7
Q ss_pred eeEeeccccCCc-hhhhcCCCCCCCCcchHHHHHHHhHhcCCCCccEEECCcEEEEEEe---CCCCCCCCCeEeeCCcEE
Q 027024 2 LGVFSSAIVSPP-EELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIF 77 (229)
Q Consensus 2 ~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~lgh~r---~~~~~~~QP~~~~~~~~~ 77 (229)
|||+|....++. ... ...+.+|++.|+|||||+.+++..++++|||+| .+...+.||+.+.+++++
T Consensus 1 CGI~G~~~~~~~~~~~----------~~~~~~m~~~l~hRGpD~~G~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~ 70 (553)
T 1ct9_A 1 ASIFGVFDIKTDAVEL----------RKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHV 70 (553)
T ss_dssp CEEEEEESCCSCHHHH----------HHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEE
T ss_pred CEEEEEEcCCCcchhH----------HHHHHHHHHHHhccCCCcccEEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEE
Confidence 999998743321 111 235778999999999999999999899999999 233368999998778899
Q ss_pred EEEEEEEccchhHHHHhC--C---CCCCchHHHHHHHHHHhhccCCCchhhhhcccccceeEEEEECCCCEEEEEEcCCC
Q 027024 78 CLFEGALDNLGSLRQQYG--L---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFG 152 (229)
Q Consensus 78 lv~nG~I~N~~eL~~~lg--~---~~~d~e~~~~l~~~~~~g~~g~~~~~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G 152 (229)
++|||+|||+.+|+++|. + +.+|+|++ +++|++|| .+++++|+|+|||++||..+++|+++||++|
T Consensus 71 lv~NGeIyN~~eLr~~L~~~~~f~s~sDtEvi--l~l~~~~g-------~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G 141 (553)
T 1ct9_A 71 LAVNGEIYNHQALRAEYGDRYQFQTGSDCEVI--LALYQEKG-------PEFLDDLQGMFAFALYDSEKDAYLIGRDHLG 141 (553)
T ss_dssp EEEEEEETTHHHHHHHHTTTSCCCSCCTTHHH--HHHHHHHT-------TTTGGGCCEEEEEEEEETTTTEEEEEECTTC
T ss_pred EEEEEEEECHHHHHHHHhccCccCCCCcHHHH--HHHHHHHH-------HHHHHhCCccEEEEEEECCCCEEEEEECCCC
Confidence 999999999999999984 1 56777775 79999998 7899999999999999998899999999999
Q ss_pred CccEEEEEeCCCEEEEEechhhhhhhccCccEEeCCCeEEEEcCCcEEEEeCCCCC
Q 027024 153 KVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNK 208 (229)
Q Consensus 153 ~rPL~y~~~~~~~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~~y~~~~~~ 208 (229)
+|||||+...++.++||||.++|...+ +.|.+||||+++.++++++++||.+.+.
T Consensus 142 ~~PLy~~~~~~~~~~faSe~~al~~~~-~~i~~l~pG~~~~~~~g~~~~yw~~~~~ 196 (553)
T 1ct9_A 142 IIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGEIRSYYHRDWF 196 (553)
T ss_dssp CSCCEEEECTTCCEEEESSGGGTTTTC-SEEEECCTTEEEETTTCSEEECCCCGGG
T ss_pred CCCeEEEEecCCEEEEeechHHHHhhc-CCEEEECCCeEEEEcCCcEEEeecCCcc
Confidence 999999995357899999999998765 4699999999999877779999998643
No 2
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=100.00 E-value=1.1e-35 Score=275.07 Aligned_cols=202 Identities=17% Similarity=0.167 Sum_probs=159.7
Q ss_pred eeEeeccccCCchhhhcCCCCCCCCcchHHHHHHHhHhcCCCCccEEEC---------------------------CcEE
Q 027024 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVT 54 (229)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~ 54 (229)
|||||....... ...+..|+..|+|||||+.+++.. ++++
T Consensus 1 CGI~G~~~~~~~-------------~~~~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~ 67 (459)
T 1ao0_A 1 CGVFGIWGHEEA-------------PQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGA 67 (459)
T ss_dssp CEEEEEESCTBH-------------HHHHHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEE
T ss_pred CEEEEEECCcch-------------HHHHHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEE
Confidence 999998754311 124568999999999999998763 4689
Q ss_pred EEEEeC---C--CCCCCCCeEe---eCCcEEEEEEEEEccchhHHHHh---CC---CCCCchHHHHHHHHHHhhccCC-C
Q 027024 55 LAYTHQ---N--ESPLRQRSFA---VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (229)
Q Consensus 55 lgh~r~---~--~~~~~QP~~~---~~~~~~lv~nG~I~N~~eL~~~l---g~---~~~d~e~~~~l~~~~~~g~~g~-~ 119 (229)
|||+|. . ...+.||+.. .+++++++|||+|+|+.+|+++| |+ +.+|+|+ ++++|.++++... +
T Consensus 68 igH~R~at~g~~~~~n~qP~~~~~~~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEv--i~~l~~~~~~~~~~~ 145 (459)
T 1ao0_A 68 IGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEV--LAHLIKRSGHFTLKD 145 (459)
T ss_dssp EEEEECCC----CGGGSSSEEEBCTTTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHH--HHHHHHTCCCSSHHH
T ss_pred EEEEecCCCCCCCccCCCCceeccCCCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHH--HHHHHHHhccCCHHH
Confidence 999992 1 1258999986 45789999999999999999998 44 4555555 5789988762111 2
Q ss_pred chhhhhcccccceeEEEEECCCCEEEEEEcCCCCccEEEEEeCCCEEEEEechhhhhhhccCccEEeCCCeEEEEcCCcE
Q 027024 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (229)
Q Consensus 120 ~~~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~rPL~y~~~~~~~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~ 199 (229)
++.+++++|+|+|||++|| .++|+++||++|+|||||+.. ++.++||||.+||.....+.|++||||+++.++.+++
T Consensus 146 a~~~~~~~l~G~fa~~i~d--~~~l~~~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~ 222 (459)
T 1ao0_A 146 QIKNSLSMLKGAYAFLIMT--ETEMIVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGM 222 (459)
T ss_dssp HHHHHHTTCCEEEEEEEEC--SSEEEEEECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEE
T ss_pred HHHHHHHhhccceEEEEEe--CCEEEEEECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCce
Confidence 4578999999999999999 479999999999999999998 6789999999999988667899999999999988775
Q ss_pred E--EEeCCCCC------CccccCCcccccC
Q 027024 200 R--SFENPKNK------ITAVPAAEEEIWG 221 (229)
Q Consensus 200 ~--~y~~~~~~------~~~~~~~d~~~~g 221 (229)
+ +||.+... .-++.|+|+.+.+
T Consensus 223 ~~~~~~~~~~~~~c~feyiyfarp~s~~~~ 252 (459)
T 1ao0_A 223 KSERFSMNINRSICSMEYIYFSRPDSNIDG 252 (459)
T ss_dssp EEEESCSSCCCCEEHHHHHTTSCTTCEETT
T ss_pred EEEecCCCccccccceeeeeccCCcchhcc
Confidence 4 57765432 2256888876544
No 3
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=2.3e-34 Score=245.49 Aligned_cols=182 Identities=16% Similarity=0.202 Sum_probs=149.1
Q ss_pred eeEeeccccCCchhhhcCCCCCCCCcchHHHHHHHhHhcCCCCccEE-E---------------------------CCcE
Q 027024 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQ-V---------------------------GDNV 53 (229)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~-~---------------------------~~~~ 53 (229)
|||||....++. ...+..|++.|+|||||+++++ + .+++
T Consensus 1 CGI~G~~~~~~~-------------~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~ 67 (240)
T 1xff_A 1 CGIVGAIAQRDV-------------AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGT 67 (240)
T ss_dssp CEEEEEECSSCC-------------HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSE
T ss_pred CcEEEEEcCcch-------------HHHHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccE
Confidence 999998854322 1357789999999999999988 6 3579
Q ss_pred EEEEEeC-----CCCCCCCCeEeeCCcEEEEEEEEEccchhHHHHh---CC---CCCCchHHHHHHHHHHhhccCC---C
Q 027024 54 TLAYTHQ-----NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---Y 119 (229)
Q Consensus 54 ~lgh~r~-----~~~~~~QP~~~~~~~~~lv~nG~I~N~~eL~~~l---g~---~~~d~e~~~~l~~~~~~g~~g~---~ 119 (229)
+|||+|. ....+.||+.+ ++++++|||+|||+.+|+++| |+ +.+|+|++ +++|+.++..+. +
T Consensus 68 ~igH~R~at~g~~~~~n~qP~~~--~~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi--~~l~~~~~~~g~~~~~ 143 (240)
T 1xff_A 68 GIAHTRWATHGEPSEVNAHPHVS--EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVI--AHLVNWELKQGGTLRE 143 (240)
T ss_dssp EEEEEECCSSSCSSTTTSSCEEE--TTEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHH--HHHHHHHHHTSSCHHH
T ss_pred EEEEEeccCCCCCCcccCCCccc--CCEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHHHhcCCCHHH
Confidence 9999992 12468999977 789999999999999999988 44 56666664 788988763232 2
Q ss_pred chhhhhcccccceeEEEEECC-CCEEEEEEcCCCCccEEEEEeCCCEEEEEechhhhhhhccCccEEeCCCeEEEEcCCc
Q 027024 120 PPNHVVGHLSGYFAFIVYDKS-TSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG 198 (229)
Q Consensus 120 ~~~~~l~~L~G~fa~~i~d~~-~~~l~~aRD~~G~rPL~y~~~~~~~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~ 198 (229)
++.+++++|+|+|||++||.. .++|+++||+ |||||+.. ++.++||||.+||...+.+ +.+||||+++.++.++
T Consensus 144 ai~~~~~~l~G~fa~~i~d~~~~~~l~~~Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~~-~~~l~pG~~~~i~~~~ 218 (240)
T 1xff_A 144 AVLRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPLVIGLG-MGENFIASDQLALLPVTRR-FIFLEEGDIAEITRRS 218 (240)
T ss_dssp HHHHHGGGCCEEEEEEEEETTCTTCEEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCSE-EEECCTTCEEEECSSC
T ss_pred HHHHHHHhcccceEEEEEecCCCCEEEEEECC---CceEEEEe-CCEEEEEECHHHHHhhCCe-EEEECCCEEEEEECCe
Confidence 345899999999999999985 6899999997 99999997 5789999999999888764 9999999999998888
Q ss_pred EEEEeCC
Q 027024 199 LRSFENP 205 (229)
Q Consensus 199 ~~~y~~~ 205 (229)
++.|...
T Consensus 219 ~~~~~~~ 225 (240)
T 1xff_A 219 VNIFDKT 225 (240)
T ss_dssp EEEECTT
T ss_pred EEEEeCC
Confidence 8776653
No 4
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=100.00 E-value=2e-31 Score=249.13 Aligned_cols=205 Identities=16% Similarity=0.126 Sum_probs=155.5
Q ss_pred eeEeeccccCCchhhhcCCCCCCCCcchHHHHHHHhHhcCCCCccEEEC----------------------------CcE
Q 027024 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG----------------------------DNV 53 (229)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~ 53 (229)
|||||.....+. ...+..|+..|+|||||+.++++. +++
T Consensus 1 CGI~G~~~~~~~-------------~~~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~ 67 (504)
T 1ecf_A 1 CGIVGIAGVMPV-------------NQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNM 67 (504)
T ss_dssp CEEEEEECSSCC-------------HHHHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSE
T ss_pred CEEEEEEcChhH-------------HHHHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCE
Confidence 999998854321 235678999999999999998863 358
Q ss_pred EEEEEeC-----CCCCCCCCeEeeC-CcEEEEEEEEEccchhHHHHh---C-C---CCCCchHHHHHHHHHHhhcc-CC-
Q 027024 54 TLAYTHQ-----NESPLRQRSFAVK-DEIFCLFEGALDNLGSLRQQY---G-L---AKSANEVILVIEAYKALRDR-AP- 118 (229)
Q Consensus 54 ~lgh~r~-----~~~~~~QP~~~~~-~~~~lv~nG~I~N~~eL~~~l---g-~---~~~d~e~~~~l~~~~~~g~~-g~- 118 (229)
+|||+|. ....+.||+.... ++++++|||+|+|+.+|+++| + . +.+|+|+ ++++|..+.+. |.
T Consensus 68 ~igH~R~sT~G~~~~~n~QP~~~~~~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEv--i~~l~~~~~~~~g~~ 145 (504)
T 1ecf_A 68 GIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEI--LLNIFASELDNFRHY 145 (504)
T ss_dssp EEEEEECCBTTBCTTSCCSCEEECSSSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHH--HHHHHHHHHTTCCSS
T ss_pred EEEEEccCcCCCCCccccCCeEeccCCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHH--HHHHHHHHHHhcccc
Confidence 9999992 2236899998643 469999999999999999988 2 2 4556665 47888765321 11
Q ss_pred --------CchhhhhcccccceeEEEEECCCCEEEEEEcCCCCccEEEEEeC--C--CEEEEEechhhhhhhccCccEEe
Q 027024 119 --------YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITA--D--GHVAFADDADLLKGACGKSLASF 186 (229)
Q Consensus 119 --------~~~~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~rPL~y~~~~--~--~~~~faSe~~aL~~~~~~~i~~l 186 (229)
+++.+++++|+|+|||++|+. .++|+++||++|+|||||+..+ + +.++||||.+||.....+.|++|
T Consensus 146 ~~~~~~~~~a~~~~~~~l~G~fa~v~~~~-~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l 224 (504)
T 1ecf_A 146 PLEADNIFAAIAATNRLIRGAYACVAMII-GHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDV 224 (504)
T ss_dssp SCCHHHHHHHHHHHHHHCCEEEEEEEEET-TTEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEEC
T ss_pred ccccccHHHHHHHhhhhcCccceEEEEEc-CCeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEEC
Confidence 234578999999999999975 3589999999999999999972 3 37999999999998887789999
Q ss_pred CCCeEEEEcCCc-EEE--Ee-CCCCCCc-----cccCCcccccCc
Q 027024 187 PQGCFFSTAVGG-LRS--FE-NPKNKIT-----AVPAAEEEIWGA 222 (229)
Q Consensus 187 pPG~~~~~~~~~-~~~--y~-~~~~~~~-----~~~~~d~~~~g~ 222 (229)
+||+++.++.++ +.. +. .+.++.- ++.|+|+.|.+.
T Consensus 225 ~PGe~v~i~~~g~~~~~~~~~~~~~~~c~fe~iYfarP~s~i~~~ 269 (504)
T 1ecf_A 225 APGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKI 269 (504)
T ss_dssp CTTEEEEEETTCCEEEEECSSSCCCCCBHHHHHTTSCTTCEETTE
T ss_pred CCCeEEEEeCCCceecceecCCCCCCccEEEEehhcChHHHhhhc
Confidence 999999887665 432 22 1223311 458888887765
No 5
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.97 E-value=3.5e-31 Score=252.49 Aligned_cols=183 Identities=15% Similarity=0.171 Sum_probs=147.7
Q ss_pred eeEeeccccCCchhhhcCCCCCCCCcchHHHHHHHhHhcCCCCccEEEC----------------------------CcE
Q 027024 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG----------------------------DNV 53 (229)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~ 53 (229)
|||||....++. ...+..|++.|+|||||+.+++.. +++
T Consensus 1 CGI~G~~~~~~~-------------~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~ 67 (608)
T 2bpl_A 1 CGIVGAIAQRDV-------------AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGT 67 (608)
T ss_dssp CEEEEEECSSCC-------------HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSE
T ss_pred CeEEEEEcCCch-------------HHHHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCE
Confidence 999998854321 235778999999999999998853 468
Q ss_pred EEEEEeC-----CCCCCCCCeEeeCCcEEEEEEEEEccchhHHHHh---CC-CCCCchHHHHHHHHHHhhccCC---Cch
Q 027024 54 TLAYTHQ-----NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL-AKSANEVILVIEAYKALRDRAP---YPP 121 (229)
Q Consensus 54 ~lgh~r~-----~~~~~~QP~~~~~~~~~lv~nG~I~N~~eL~~~l---g~-~~~d~e~~~~l~~~~~~g~~g~---~~~ 121 (229)
+|||+|. ....+.||+.+ ++++++|||+|+|+.+|+++| |+ ..+++|.++++++|.++-+.|. +++
T Consensus 68 ~igH~R~at~g~~~~~n~qP~~~--~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi~~l~~~~~~~g~~~~~av 145 (608)
T 2bpl_A 68 GIAHTRWATHGEPSEVNAHPHVS--EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAV 145 (608)
T ss_dssp EEEEEECCCSSSCCGGGCSCEEE--TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred EEEEEccCCCCCCCccCCCCccC--CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhcCCCHHHHH
Confidence 9999992 12367899987 789999999999999999998 55 3334444445788887622222 345
Q ss_pred hhhhcccccceeEEEEECCC-CEEEEEEcCCCCccEEEEEeCCCEEEEEechhhhhhhccCccEEeCCCeEEEEcCCcEE
Q 027024 122 NHVVGHLSGYFAFIVYDKST-STLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (229)
Q Consensus 122 ~~~l~~L~G~fa~~i~d~~~-~~l~~aRD~~G~rPL~y~~~~~~~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~ 200 (229)
.+++++|+|+|||++||... ++|+++||+ |||||+.. ++.++||||.+||...+. .+.+|+||+++.++.++++
T Consensus 146 ~~~~~~l~G~fa~~i~d~~~~~~l~~aRd~---~PL~~g~~-~~~~~~aSe~~al~~~~~-~~~~l~~G~i~~i~~~~~~ 220 (608)
T 2bpl_A 146 LRAIPQLRGAYGTVIMDSRHPDTLLAARSG---SPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVN 220 (608)
T ss_dssp HHHGGGCCSSEEEEEEETTCTTCEEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCC-EEEECCTTCEEEECSSCEE
T ss_pred HHHHHhhcCceEEEEEecCCCCEEEEEECC---CceEEEEe-CCeEEEEechHHHHhcCC-eEEEECCCeEEEEECCeEE
Confidence 68999999999999999887 899999996 99999998 578999999999988874 6999999999999888877
Q ss_pred EEeC
Q 027024 201 SFEN 204 (229)
Q Consensus 201 ~y~~ 204 (229)
.|..
T Consensus 221 ~~~~ 224 (608)
T 2bpl_A 221 IFDK 224 (608)
T ss_dssp EECS
T ss_pred EEeC
Confidence 7654
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.96 E-value=1.2e-28 Score=230.78 Aligned_cols=148 Identities=19% Similarity=0.249 Sum_probs=121.7
Q ss_pred HhcCCCCccEEECCcEEEEEEeCCCCCCCCCeEeeC----CcEEEEEEEEEccchhHHHHhCC---CCCCchHHHHHHHH
Q 027024 38 LQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVK----DEIFCLFEGALDNLGSLRQQYGL---AKSANEVILVIEAY 110 (229)
Q Consensus 38 ~~RGpd~~~~~~~~~~~lgh~r~~~~~~~QP~~~~~----~~~~lv~nG~I~N~~eL~~~lg~---~~~d~e~~~~l~~~ 110 (229)
.+|+|+..+.++.. ....||++..+ ++++++|||+|||+.+|+++|++ +.+|+|+ ++++|
T Consensus 40 ~~r~p~~~~~~~~~-----------~~~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEv--il~l~ 106 (513)
T 1jgt_A 40 PQGERSLAATLVHA-----------PSVAPDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAEL--VLRLL 106 (513)
T ss_dssp TTGGGSCEEEEEEC-----------TTSCGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHH--HHHHH
T ss_pred ccCCCccccceeeC-----------CccCCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHH--HHHHH
Confidence 46777776654422 13479987654 78999999999999999999854 4555555 58999
Q ss_pred HHhhccCCCchhhhhcccccceeEEEEECCCCEEEEEEcCCCCccEEEEEeCCCEEEEEechhhhhhhc-----------
Q 027024 111 KALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGAC----------- 179 (229)
Q Consensus 111 ~~~g~~g~~~~~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~rPL~y~~~~~~~~~faSe~~aL~~~~----------- 179 (229)
++|| .+++++|+|+|||++||.. +|+++||++|+|||||+.. ++.++||||+++|...+
T Consensus 107 ~~~g-------~~~~~~l~G~fA~~i~d~~--~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~ 176 (513)
T 1jgt_A 107 ERYD-------LHAFRLVNGRFATVVRTGD--RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADAR 176 (513)
T ss_dssp HHHG-------GGGGGTCCEEEEEEEEETT--EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSE
T ss_pred HHHh-------HHhHhhcCeeEEEEEEECC--EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCC
Confidence 9998 7899999999999999974 4999999999999999998 68899999999998876
Q ss_pred ----cCccEEeCCCeEEEEc--CCc--EEEEeCCCCC
Q 027024 180 ----GKSLASFPQGCFFSTA--VGG--LRSFENPKNK 208 (229)
Q Consensus 180 ----~~~i~~lpPG~~~~~~--~~~--~~~y~~~~~~ 208 (229)
.+.|++|||||++.++ +++ .++||.+...
T Consensus 177 ~~t~~~~i~~l~pG~~l~i~~~~g~~~~~~yw~~~~~ 213 (513)
T 1jgt_A 177 RVAGLTGVYQVPAGAVMDIDLGSGTAVTHRTWTPGLS 213 (513)
T ss_dssp ECSSCSSCEECCTTEEEEEETTTTEEEEEECCCCCCS
T ss_pred ccccccceEEcCCCcEEEEEcCCCCEEEEeecCCccc
Confidence 3789999999999997 665 5789987643
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.94 E-value=2.9e-27 Score=221.02 Aligned_cols=145 Identities=13% Similarity=0.124 Sum_probs=121.6
Q ss_pred CcEEEEEEe--CCCCCCCCCeEeeCCcEEEEEEEEEccch---hHHHHhC-C--CCCCchHHHHHHHHHHhhccCCCchh
Q 027024 51 DNVTLAYTH--QNESPLRQRSFAVKDEIFCLFEGALDNLG---SLRQQYG-L--AKSANEVILVIEAYKALRDRAPYPPN 122 (229)
Q Consensus 51 ~~~~lgh~r--~~~~~~~QP~~~~~~~~~lv~nG~I~N~~---eL~~~lg-~--~~~d~e~~~~l~~~~~~g~~g~~~~~ 122 (229)
++++|||+| .....+.||+.+.+++++++ |+|||+. +|+++|. . +.+|+|+ ++++|++|| .
T Consensus 26 ~~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEv--il~l~~~~g-------~ 94 (503)
T 1q15_A 26 KGEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAEL--LALLFTRLG-------A 94 (503)
T ss_dssp EEEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHH--HHHHHHHHC-------G
T ss_pred CceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHH--HHHHHHHHH-------H
Confidence 479999999 23357899998876777777 9999999 9999883 2 4555665 589999998 7
Q ss_pred hhhcccccceeEEEEECCCCEEEEEEcCCCCccEEEEEeCCCE-----------------EEEEechhhhhhh-------
Q 027024 123 HVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGH-----------------VAFADDADLLKGA------- 178 (229)
Q Consensus 123 ~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~rPL~y~~~~~~~-----------------~~faSe~~aL~~~------- 178 (229)
+++++|+|+|||++||..++ |+++||++|+|||||+.. ++. ++||||+++|...
T Consensus 95 ~~l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T 172 (503)
T 1q15_A 95 NALALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYT 172 (503)
T ss_dssp GGGGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCC
T ss_pred HHHHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCc
Confidence 89999999999999998888 999999999999999987 567 9999999999875
Q ss_pred ccCccEEeCCCeEEEEcCCc------EEEEeCCCCC
Q 027024 179 CGKSLASFPQGCFFSTAVGG------LRSFENPKNK 208 (229)
Q Consensus 179 ~~~~i~~lpPG~~~~~~~~~------~~~y~~~~~~ 208 (229)
..+.|++||||+++.++.++ .++||.+...
T Consensus 173 ~~~~v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~~ 208 (503)
T 1q15_A 173 PVKNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPAS 208 (503)
T ss_dssp SBTTEEECCSSEEEEEEECTTCCEEEEEEESCCCCC
T ss_pred ccCCeEEECCCeEEEEeCCCcccccceeeecCCccc
Confidence 14679999999999887654 6789987543
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.93 E-value=2e-25 Score=193.83 Aligned_cols=143 Identities=13% Similarity=0.071 Sum_probs=106.5
Q ss_pred EEEEEEeC-----CCCCCCCCeEeeCCcEEEEEEEEEccchhHHHHh---C--C------CCCCchHHHHHHHHHHhhcc
Q 027024 53 VTLAYTHQ-----NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---G--L------AKSANEVILVIEAYKALRDR 116 (229)
Q Consensus 53 ~~lgh~r~-----~~~~~~QP~~~~~~~~~lv~nG~I~N~~eL~~~l---g--~------~~~d~e~~~~l~~~~~~g~~ 116 (229)
++|||+|. ....+.||+.. ++++++|||+|+|+++|+++| | . +.+|||+ ++++|..++..
T Consensus 83 ~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEv--i~~l~~~~~~~ 158 (274)
T 3mdn_A 83 LFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEV--LFLLALSEGLE 158 (274)
T ss_dssp EEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHH--HHHHHHHTTTT
T ss_pred EEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHH--HHHHHHHhhhc
Confidence 68999991 22468999986 789999999999999999887 3 1 3455555 57788666532
Q ss_pred CC--Cchhhhhcccccc-----------eeEEEEECCCCEEEEEEcC-CCCccEEEEEeCC--CEEEEEechhhhhhhcc
Q 027024 117 AP--YPPNHVVGHLSGY-----------FAFIVYDKSTSTLFVASDQ-FGKVPLYWGITAD--GHVAFADDADLLKGACG 180 (229)
Q Consensus 117 g~--~~~~~~l~~L~G~-----------fa~~i~d~~~~~l~~aRD~-~G~rPL~y~~~~~--~~~~faSe~~aL~~~~~ 180 (229)
.. +++.+++++|+|. |+|+++|. ++|+++||+ +|++||+|+...+ +.++||||. |...+
T Consensus 159 ~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~~~- 233 (274)
T 3mdn_A 159 HDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LETDE- 233 (274)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--CC-
T ss_pred CCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cccCC-
Confidence 11 3456899999998 89999984 789999998 9999977777633 689999999 43333
Q ss_pred CccEEeCCCeEEEEcCCcEEEEeC
Q 027024 181 KSLASFPQGCFFSTAVGGLRSFEN 204 (229)
Q Consensus 181 ~~i~~lpPG~~~~~~~~~~~~y~~ 204 (229)
+.|++||||+++.+++++++.+.-
T Consensus 234 ~~~~~v~pGeiv~i~~~~v~~~~~ 257 (274)
T 3mdn_A 234 GDWTELRPGRMLTIGAEGAAERDF 257 (274)
T ss_dssp SCCEECCSSEEEEEETTEEEEEEC
T ss_pred ceEEEECcCEEEEEeCCeEEEEEc
Confidence 469999999999998888776543
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.86 E-value=2.2e-23 Score=179.41 Aligned_cols=176 Identities=12% Similarity=0.075 Sum_probs=123.7
Q ss_pred CeeEeeccccCCchhhhcCCCCCCCCcchHHHHHHHhHhcC------CCCccEEEC------------------------
Q 027024 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTN------SSAVSVQVG------------------------ 50 (229)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RG------pd~~~~~~~------------------------ 50 (229)
||||||..... |..+.. -+..|+||| +|++++...
T Consensus 1 MCgi~G~~~~~-~~~~~~--------------gL~~Lq~RG~~~~~~~DgaGIa~~~~~~~~~~k~~g~v~~~~~~~~l~ 65 (257)
T 1te5_A 1 MCELLGMSANV-PTDIVF--------------SFTGLMQRGGGTGPHRDGWGIAFYEGRGVRLFQDPLASVDSEVARLVQ 65 (257)
T ss_dssp -CCEEEEEEEE-EEECEE--------------EECCCCCCSSSSSSSBCEEEEEEEETTEEEEEEECSBSSCCHHHHHHH
T ss_pred CCeEEEEEcCC-CccHHH--------------HHHHHHhccCCCCCCCCeEEEEEEeCCceEEEECCCccccchHHHHHh
Confidence 99999998643 222110 346689999 799886431
Q ss_pred -----CcEEEEEEe-----CCCCCCCCCeEee--CCcEEEEEEEEEccchhHHHHhCC--CCCCchHHHHHHHHHHhhc-
Q 027024 51 -----DNVTLAYTH-----QNESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQYGL--AKSANEVILVIEAYKALRD- 115 (229)
Q Consensus 51 -----~~~~lgh~r-----~~~~~~~QP~~~~--~~~~~lv~nG~I~N~~eL~~~lg~--~~~d~e~~~~l~~~~~~g~- 115 (229)
++++|||+| .....+.||+... .++++++|||.|.|+++ +.+++. +.+|||++ ++++.....
T Consensus 66 ~~~l~g~~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi--~~li~~~~~~ 142 (257)
T 1te5_A 66 RFPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAA--FCDLLNRVRR 142 (257)
T ss_dssp HSCCEEEEEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHH--HHHHHHHHHH
T ss_pred hCCccccEEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHH--HHHHHHHHHH
Confidence 136999999 2234789999865 45799999999999998 766543 56667665 455543221
Q ss_pred ---cCC--Cchhhhhcccc------cceeEEEEECCCCEEEEEEc----------CCCCccEEE-------EE---eCCC
Q 027024 116 ---RAP--YPPNHVVGHLS------GYFAFIVYDKSTSTLFVASD----------QFGKVPLYW-------GI---TADG 164 (229)
Q Consensus 116 ---~g~--~~~~~~l~~L~------G~fa~~i~d~~~~~l~~aRD----------~~G~rPL~y-------~~---~~~~ 164 (229)
+.+ +++.++++++. |.|+|++.|. ++|+++|| |+|.|||+. +. ..++
T Consensus 143 ~~~~~~~~~a~~~al~~l~~~~~~~G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~ 220 (257)
T 1te5_A 143 AFPEPVPVEVLLPVLISACDEYRKKGVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDV 220 (257)
T ss_dssp HCSSCCCHHHHHHHHHHHHHHHHTTBCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCE
T ss_pred hcCCCchHHHHHHHHHHHHHHHHhcCcEEEEEEcC--CEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCC
Confidence 111 23455565555 9999999885 78999999 999999975 31 1134
Q ss_pred EEEEEechhhhhhhccCccEEeCCCeEEEEcCCcEE
Q 027024 165 HVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (229)
Q Consensus 165 ~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~ 200 (229)
.++||||. |.. .+.|+++|||+++.++++++.
T Consensus 221 ~~vvASE~--l~~--~~~wr~v~pGe~v~i~~~~~~ 252 (257)
T 1te5_A 221 VTVIATEP--LTD--NENWTLQQSGEWVLWWGGEVL 252 (257)
T ss_dssp EEEEESSC--SSS--SSSCEEECTTCEEEEETTEEE
T ss_pred EEEEEeCc--cCC--CCCeeEeCCCEEEEEECCEEE
Confidence 68999995 442 467999999999999887655
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.58 E-value=4.9e-15 Score=150.37 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=101.2
Q ss_pred cEEEEEEeC-----CCCCCCCCeEeeCCcEEEEEEEEEccchhHHHHh-------------------C-C---CCCCchH
Q 027024 52 NVTLAYTHQ-----NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY-------------------G-L---AKSANEV 103 (229)
Q Consensus 52 ~~~lgh~r~-----~~~~~~QP~~~~~~~~~lv~nG~I~N~~eL~~~l-------------------g-~---~~~d~e~ 103 (229)
.++|||+|. +.-.++||+. +++|||+|.|...+++.+ + + +.+|||+
T Consensus 203 ~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSev 276 (1479)
T 1ea0_A 203 DFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSGS 276 (1479)
T ss_dssp SEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHHH
T ss_pred eEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHHH
Confidence 489999992 2236789984 289999999999887542 1 1 4567776
Q ss_pred HH-HHHHHHHhhccCCCch-------------------------hhhhcccccceeEEEEECCCCEEEEEEcCCCCccEE
Q 027024 104 IL-VIEAYKALRDRAPYPP-------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLY 157 (229)
Q Consensus 104 ~~-~l~~~~~~g~~g~~~~-------------------------~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~rPL~ 157 (229)
+- +++++...|..=++++ ..+++.++|+||+++.|. +.++++|||.|.|||.
T Consensus 277 ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~dg--~~l~a~~DrnGlRPl~ 354 (1479)
T 1ea0_A 277 LDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDG--RWVVGGMDRNGLRPMR 354 (1479)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECSS--SEEEEECCTTCCSCCE
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEeC--CEEEEEecCCCCcceE
Confidence 41 1333322221000011 245789999999999874 8999999999999999
Q ss_pred EEEeCCCEEEEEechhhhhhhccCccE--EeCCCeEEEEcCC
Q 027024 158 WGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (229)
Q Consensus 158 y~~~~~~~~~faSe~~aL~~~~~~~i~--~lpPG~~~~~~~~ 197 (229)
|+.++|+.+++|||..+|...+.+-++ ++.||+++.++..
T Consensus 355 ~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 396 (1479)
T 1ea0_A 355 YTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQ 396 (1479)
T ss_dssp EEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred EEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 999876789999999999777666566 9999999988643
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.53 E-value=4.2e-14 Score=143.87 Aligned_cols=138 Identities=14% Similarity=0.120 Sum_probs=100.1
Q ss_pred cEEEEEEeCC-----CCCCCCCeEeeCCcEEEEEEEEEccchhHH------HH-----------h---C-C---CCCCch
Q 027024 52 NVTLAYTHQN-----ESPLRQRSFAVKDEIFCLFEGALDNLGSLR------QQ-----------Y---G-L---AKSANE 102 (229)
Q Consensus 52 ~~~lgh~r~~-----~~~~~QP~~~~~~~~~lv~nG~I~N~~eL~------~~-----------l---g-~---~~~d~e 102 (229)
.++|||+|.. .-.++||+. +++|||+|.|...++ +. | + . +.||||
T Consensus 199 ~~aigH~RySTnt~p~w~~AQPf~------~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe 272 (1520)
T 1ofd_A 199 NFAVYHRRFSTNTMPKWPLAQPMR------LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSY 272 (1520)
T ss_dssp SEEEEEECCCSSSCCCGGGSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHH
T ss_pred eEEEEEccccCCCCCCcccCCchh------eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHH
Confidence 4799999922 225689984 389999999887776 21 1 3 2 567777
Q ss_pred HHH-HHHHHHHhhccCCCch---------------------------hhhhcccccceeEEEEECCCCEEEEEEcCCCCc
Q 027024 103 VIL-VIEAYKALRDRAPYPP---------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKV 154 (229)
Q Consensus 103 ~~~-~l~~~~~~g~~g~~~~---------------------------~~~l~~L~G~fa~~i~d~~~~~l~~aRD~~G~r 154 (229)
++. +++++.+.|..=++++ ..+++.++|+||+++.|. +.++++|||.|.|
T Consensus 273 ~ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGlR 350 (1520)
T 1ofd_A 273 NLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGLR 350 (1520)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCCS
T ss_pred HHHHHHHHHHhcCCCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCCC
Confidence 642 1233323221000011 234689999999999885 7999999999999
Q ss_pred cEEEEEeCCCEEEEEechhhhhhhccCccE--EeCCCeEEEEcCC
Q 027024 155 PLYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (229)
Q Consensus 155 PL~y~~~~~~~~~faSe~~aL~~~~~~~i~--~lpPG~~~~~~~~ 197 (229)
||.|+.++|+.+++|||..+|...+.+-++ ++.||+++.++..
T Consensus 351 Pl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 395 (1520)
T 1ofd_A 351 PARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLA 395 (1520)
T ss_dssp CCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred ceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 999999966789999999999777776666 9999999988643
No 12
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=32.08 E-value=12 Score=28.95 Aligned_cols=27 Identities=19% Similarity=0.415 Sum_probs=20.2
Q ss_pred ccceeEEEEECCCCEEEEEEcCCCCccEEE
Q 027024 129 SGYFAFIVYDKSTSTLFVASDQFGKVPLYW 158 (229)
Q Consensus 129 ~G~fa~~i~d~~~~~l~~aRD~~G~rPL~y 158 (229)
+|.|++++.+ .+.++-..++ |++|||=
T Consensus 27 e~~~ScVv~~--~~~i~ts~~r-Gv~pL~~ 53 (151)
T 1vk9_A 27 KKDLSLLAYS--GRSIFESKDS-GLKPVVE 53 (151)
T ss_dssp HTTCSEEEES--SSEEEEECCS-TTHHHHH
T ss_pred hCCeeEEEec--CCEEEEeCCc-ChHHHHH
Confidence 3789999954 4567776664 9999983
No 13
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=21.96 E-value=1.1e+02 Score=17.13 Aligned_cols=21 Identities=24% Similarity=0.724 Sum_probs=13.5
Q ss_pred cccceeEEEEECCCCE-EEEEE
Q 027024 128 LSGYFAFIVYDKSTST-LFVAS 148 (229)
Q Consensus 128 L~G~fa~~i~d~~~~~-l~~aR 148 (229)
++=+|-|+|+|..++. |+++|
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 4afx_B 8 IDRPFHFMIYEETSGMLLFLGR 29 (36)
T ss_dssp CCSCEEEEEEETTTTEEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEEE
Confidence 4567888888876654 44444
No 14
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=21.32 E-value=1.2e+02 Score=17.32 Aligned_cols=21 Identities=24% Similarity=0.626 Sum_probs=14.2
Q ss_pred cccceeEEEEECCCCE-EEEEE
Q 027024 128 LSGYFAFIVYDKSTST-LFVAS 148 (229)
Q Consensus 128 L~G~fa~~i~d~~~~~-l~~aR 148 (229)
++=+|-|+|+|..++. |+++|
T Consensus 12 ~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 12 IDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 5668888888876654 45544
Done!