Query 027026
Match_columns 229
No_of_seqs 241 out of 1762
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 05:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.9 1.8E-27 6.3E-32 194.0 12.6 106 117-229 55-161 (161)
2 3gla_A Low molecular weight he 99.9 3.3E-26 1.1E-30 172.2 14.6 98 116-219 2-99 (100)
3 1gme_A Heat shock protein 16.9 99.9 1.2E-26 4.1E-31 187.6 12.2 108 116-229 41-150 (151)
4 3aab_A Putative uncharacterize 99.9 1E-26 3.5E-31 181.6 9.6 115 83-220 2-118 (123)
5 4fei_A Heat shock protein-rela 99.9 2.4E-25 8.4E-30 168.5 13.8 94 116-220 4-97 (102)
6 3l1e_A Alpha-crystallin A chai 99.9 5.7E-23 1.9E-27 156.8 14.0 98 119-229 3-105 (106)
7 2wj5_A Heat shock protein beta 99.9 1.7E-22 5.8E-27 152.8 11.4 95 120-227 3-99 (101)
8 3q9p_A Heat shock protein beta 99.9 4.5E-22 1.5E-26 146.0 11.3 83 123-218 2-85 (85)
9 2bol_A TSP36, small heat shock 99.9 1.6E-21 5.4E-26 174.5 13.8 97 117-227 97-198 (314)
10 2klr_A Alpha-crystallin B chai 99.9 1.8E-21 6.1E-26 160.9 10.2 95 120-227 65-162 (175)
11 2y1y_A Alpha-crystallin B chai 99.8 1.5E-20 5.3E-25 139.0 11.3 84 124-220 2-86 (90)
12 2bol_A TSP36, small heat shock 99.8 2.5E-19 8.7E-24 160.2 10.9 91 118-218 220-314 (314)
13 1rl1_A Suppressor of G2 allele 99.0 1.8E-09 6.1E-14 82.2 8.3 82 117-219 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 2E-09 6.9E-14 78.6 8.0 81 118-219 2-82 (92)
15 3eud_A Protein SHQ1; CS domain 98.2 2.1E-05 7.3E-10 59.9 12.4 79 116-220 15-98 (115)
16 3igf_A ALL4481 protein; two-do 98.2 2.7E-06 9.3E-11 77.4 8.7 71 119-217 298-369 (374)
17 2k8q_A Protein SHQ1; beta-sand 98.2 3.3E-06 1.1E-10 66.3 6.9 76 118-219 3-83 (134)
18 1x5m_A Calcyclin-binding prote 97.8 0.00024 8.1E-09 54.9 11.0 81 118-219 20-104 (127)
19 1wh0_A Ubiquitin carboxyl-term 97.8 0.00019 6.4E-09 56.3 10.0 90 118-219 19-112 (134)
20 1wgv_A KIAA1068 protein; CS do 97.7 0.00049 1.7E-08 52.8 11.4 83 116-219 17-102 (124)
21 1wfi_A Nuclear distribution ge 97.7 0.00024 8.2E-09 55.1 9.6 79 117-219 6-88 (131)
22 3qor_A Nuclear migration prote 97.7 0.00047 1.6E-08 52.8 10.6 80 116-219 14-97 (121)
23 2o30_A Nuclear movement protei 97.6 0.00082 2.8E-08 52.1 11.2 76 118-218 4-80 (131)
24 1ejf_A Progesterone receptor P 97.5 0.00067 2.3E-08 52.2 10.0 78 120-219 5-82 (125)
25 2rh0_A NUDC domain-containing 97.3 0.0022 7.7E-08 51.3 10.9 78 117-219 12-91 (157)
26 2kmw_A Uncharacterized protein 97.2 0.0015 5.1E-08 52.0 8.1 78 118-219 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.0 0.00035 1.2E-08 54.5 2.7 84 118-218 6-97 (134)
28 3q9p_A Heat shock protein beta 78.6 4.5 0.00016 28.1 5.6 34 184-218 7-40 (85)
29 4fei_A Heat shock protein-rela 74.6 12 0.00039 26.8 7.0 32 130-161 63-95 (102)
30 2cql_A OK/SW-CL.103, 60S ribos 71.6 8.3 0.00028 28.1 5.5 19 141-159 20-38 (100)
31 2y1y_A Alpha-crystallin B chai 71.2 6.6 0.00023 27.5 4.9 33 184-217 6-38 (90)
32 3gla_A Low molecular weight he 71.0 8.3 0.00029 27.3 5.4 34 184-218 14-47 (100)
33 3l1e_A Alpha-crystallin A chai 69.2 8.1 0.00028 28.0 5.1 32 184-216 12-43 (106)
34 2nwt_A UPF0165 protein AF_2212 68.8 4.4 0.00015 27.8 3.2 30 199-228 3-32 (69)
35 2wj5_A Heat shock protein beta 68.6 7.8 0.00027 27.8 4.9 34 184-218 11-44 (101)
36 3aab_A Putative uncharacterize 65.8 14 0.00047 27.3 5.9 35 184-219 34-69 (123)
37 4eld_A MJ16.5-P1, small heat s 65.2 12 0.00043 29.0 5.8 33 185-218 67-99 (161)
38 1nkw_E 50S ribosomal protein L 63.6 15 0.00052 30.4 6.2 46 141-217 39-84 (212)
39 1vq8_E 50S ribosomal protein L 62.7 13 0.00044 30.0 5.5 47 141-217 9-55 (178)
40 1rl6_A Protein (ribosomal prot 62.5 20 0.00067 28.8 6.5 46 141-217 11-56 (177)
41 3j21_F 50S ribosomal protein L 53.5 15 0.00052 29.7 4.4 45 141-215 14-58 (184)
42 2klr_A Alpha-crystallin B chai 53.1 17 0.00058 28.9 4.7 33 184-217 73-105 (175)
43 3iz5_F 60S ribosomal protein L 52.0 35 0.0012 27.7 6.4 46 141-216 13-60 (190)
44 1gme_A Heat shock protein 16.9 51.7 23 0.0008 27.2 5.2 33 129-161 105-138 (151)
45 3v2d_H 50S ribosomal protein L 48.2 38 0.0013 27.1 6.1 44 141-215 12-55 (180)
46 3u5e_H L8, RP24, YL11, 60S rib 44.7 58 0.002 26.3 6.7 46 141-216 13-59 (191)
47 3oeq_A Frataxin homolog, mitoc 39.5 33 0.0011 25.9 4.1 16 201-216 49-64 (123)
48 2zkr_e 60S ribosomal protein L 37.7 52 0.0018 26.6 5.3 51 136-216 8-61 (192)
49 4a17_E RPL9, 60S ribosomal pro 37.6 41 0.0014 27.2 4.7 20 140-159 12-31 (188)
50 1ew4_A CYAY protein; friedreic 35.8 26 0.00089 25.7 2.9 17 200-216 29-45 (106)
51 3bbo_I Ribosomal protein L6; l 34.2 16 0.00053 30.6 1.6 47 141-217 54-100 (223)
52 1rl1_A Suppressor of G2 allele 29.2 48 0.0017 23.7 3.5 34 127-160 53-87 (114)
53 2o30_A Nuclear movement protei 28.7 1.4E+02 0.0046 22.1 6.1 40 174-214 5-44 (131)
54 1n91_A ORF, hypothetical prote 28.7 79 0.0027 23.2 4.6 37 123-160 8-45 (108)
55 3r8s_G 50S ribosomal protein L 26.2 32 0.0011 27.5 2.2 43 141-214 11-53 (176)
56 3jx8_A Putative lipoprotein; s 24.9 61 0.0021 26.6 3.8 39 121-159 34-72 (250)
57 2uwa_A Cellulase; glycoside hy 23.2 1.3E+02 0.0044 25.4 5.6 43 140-195 31-74 (274)
58 2ks0_A Uncharacterized protein 21.4 44 0.0015 22.7 1.8 24 138-161 17-40 (71)
59 2rh0_A NUDC domain-containing 20.8 2.1E+02 0.007 21.9 5.9 41 174-215 14-54 (157)
60 4awd_A Beta-porphyranase; hydr 20.7 1.6E+02 0.0056 25.5 5.8 51 140-195 85-145 (324)
61 2kq1_A BH0266 protein; solutio 20.3 1.8E+02 0.0063 20.9 5.3 27 199-225 80-106 (119)
62 1wgv_A KIAA1068 protein; CS do 20.1 2.3E+02 0.0079 20.5 5.8 39 175-214 21-60 (124)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=1.8e-27 Score=194.02 Aligned_cols=106 Identities=25% Similarity=0.351 Sum_probs=91.8
Q ss_pred CCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeee-eeeeEEEEEECCCC
Q 027026 117 GRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSN-GYGSYSTRIALPDN 195 (229)
Q Consensus 117 ~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er-~~g~f~r~i~LP~~ 195 (229)
..+|+||+|++++|+|.++|||++++||+|+++++.|+|+|+++..... +.+.+++.|| .+|.|.|+|.||.+
T Consensus 55 ~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~------~~~~~~~~Er~~~g~f~R~~~LP~~ 128 (161)
T 4eld_A 55 GFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMIT------ESERIIYSEIPEEEEIYRTIKLPAT 128 (161)
T ss_dssp SCCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCC------SSCEEEEECSCCCCEEEEEEECSSC
T ss_pred cccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccC------CCceEEEEEeeccccEEEEEECCCC
Confidence 3556999999999999999999999999999999999999998654332 3456888999 99999999999999
Q ss_pred cccCceEEEEECCEEEEEEeccCCCCCceEeecC
Q 027026 196 VEFEKIQAEVKDGVLYITIPKASSTAKIVDINVQ 229 (229)
Q Consensus 196 vd~~~IkA~~~nGvL~ItiPK~~~~~k~i~I~iq 229 (229)
||.++|+|+|+||||+|++||.+.. +...|+||
T Consensus 129 vd~~~i~A~~~nGvL~I~lpK~~~~-~~r~I~Ie 161 (161)
T 4eld_A 129 VKEENASAKFENGVLSVILPKAESS-IKKGINIE 161 (161)
T ss_dssp BCGGGCEEEEETTEEEEEEEBCGGG-SCCCCCCC
T ss_pred cccccEEEEEECCEEEEEEEcCCCC-CCcEeecC
Confidence 9999999999999999999998653 34445544
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.94 E-value=3.3e-26 Score=172.23 Aligned_cols=98 Identities=29% Similarity=0.508 Sum_probs=88.9
Q ss_pred CCCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCC
Q 027026 116 RGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDN 195 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~ 195 (229)
.+.|++||.|++++|+|.++|||++++||+|+++++.|+|+|++...... +.+.++..|+.+|.|.|+|.||.+
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~------~~~~~~~~er~~g~f~r~~~LP~~ 75 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESST------ETERFSRIERRYGSFHRRFALPDS 75 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGS------SGGGEEEECCCCEEEEEEEECCTT
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCcc------CCccEEEEeecceEEEEEEECCCC
Confidence 36899999999999999999999999999999999999999999765433 356788899999999999999999
Q ss_pred cccCceEEEEECCEEEEEEeccCC
Q 027026 196 VEFEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 196 vd~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
||.++|+|.|+||+|+|++||.+.
T Consensus 76 vd~~~i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 76 ADADGITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp BCTTSCEEEEETTEEEEEEEBC--
T ss_pred cChHHeEEEEeCCEEEEEEecCCC
Confidence 999999999999999999999764
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=1.2e-26 Score=187.61 Aligned_cols=108 Identities=25% Similarity=0.470 Sum_probs=94.5
Q ss_pred CCCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEE-CCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCC
Q 027026 116 RGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVE-ESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPD 194 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~ 194 (229)
.+.|++||+|++++|+|.++|||++++||+|.++ ++.|+|+|+++...+. +.+.++..||.+|.|.|+|.||+
T Consensus 41 ~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~------~~~~~~~~Er~~g~F~R~~~LP~ 114 (151)
T 1gme_A 41 FANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKED------KNDKWHRVERSSGKFVRRFRLLE 114 (151)
T ss_dssp HGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCC------TTCEEEECCCCCCCEEEEEECSS
T ss_pred ccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcccccc------CCceEEEEeEeccEEEEEEECCC
Confidence 3578999999999999999999999999999995 6899999988654432 34678888999999999999999
Q ss_pred CcccCceEEEEECCEEEEEEeccCCC-CCceEeecC
Q 027026 195 NVEFEKIQAEVKDGVLYITIPKASST-AKIVDINVQ 229 (229)
Q Consensus 195 ~vd~~~IkA~~~nGvL~ItiPK~~~~-~k~i~I~iq 229 (229)
+||.++|+|.|+||||+|++||.+.. .+.+.|+|+
T Consensus 115 ~vd~~~i~A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 115 DAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp CCCGGGCEEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred CccccceEEEEECCEEEEEEEccCcCCCCCeEeeeC
Confidence 99999999999999999999998754 455677765
No 4
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.94 E-value=1e-26 Score=181.65 Aligned_cols=115 Identities=21% Similarity=0.228 Sum_probs=89.5
Q ss_pred HHHHHHHHHHhcCcccCCCCCCccccccccccCCCCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEEC-CEEEEEEEEec
Q 027026 83 QQMMETMERIMEDPFAYGVTWPSQQERVRSGYRRGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEE-SMLVIKAEKAQ 161 (229)
Q Consensus 83 ~~m~~~mdr~fe~~~~~~~~~p~~~~~~~~~~~~~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~-~~L~I~g~~~~ 161 (229)
+.|+++|+++|+++..... ..+.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.
T Consensus 2 ~~~~~em~~~~~~~~~~~~-------------~~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~ 68 (123)
T 3aab_A 2 YYLGKELQKRSEELSRGFY-------------ELVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREI 68 (123)
T ss_dssp ------------CCCHHHH-------------HHHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCC
T ss_pred hhHHHHHHHHHHHHhhhcc-------------ccCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEec
Confidence 4567788888888653110 123688999999999999999999999999999999 99999998864
Q ss_pred ccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCce-EEEEECCEEEEEEeccCCC
Q 027026 162 RNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKI-QAEVKDGVLYITIPKASST 220 (229)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~I-kA~~~nGvL~ItiPK~~~~ 220 (229)
.. ++.++..||.+ .|.|+|.||.+||.++| +|.|+||+|+|++||.+..
T Consensus 69 ~~---------~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 69 TE---------PGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118 (123)
T ss_dssp CC---------CSCEEEECSCS-EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGGEE
T ss_pred cC---------CCeEEEEEEeE-EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCCCC
Confidence 32 35788899999 99999999999999999 9999999999999998754
No 5
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.93 E-value=2.4e-25 Score=168.53 Aligned_cols=94 Identities=20% Similarity=0.293 Sum_probs=87.4
Q ss_pred CCCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCC
Q 027026 116 RGRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDN 195 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~ 195 (229)
.+.|++||+|++++|+|.++|||++++||+|+++++.|+|+|+++. ++.++..||.+|.|.|+|.||.+
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~-----------~~~~~~~er~~g~f~R~~~LP~~ 72 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPG-----------TEHLLRSERPSGRFVRELAFPEP 72 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECC-----------CSSCSSCCSEEEEEEEEEECSSC
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEec-----------CCCEEEEEEeccEEEEEEECCCC
Confidence 4689999999999999999999999999999999999999999842 35678889999999999999999
Q ss_pred cccCceEEEEECCEEEEEEeccCCC
Q 027026 196 VEFEKIQAEVKDGVLYITIPKASST 220 (229)
Q Consensus 196 vd~~~IkA~~~nGvL~ItiPK~~~~ 220 (229)
||.++|+|+|+||+|+|++||.++.
T Consensus 73 vd~~~i~A~~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 73 VRPASGVASLAGGVLTVRFEKLRPT 97 (102)
T ss_dssp BCTTCCEEEEETTEEEEEEEBSSCC
T ss_pred cchhHcEEEEECCEEEEEEEccCcc
Confidence 9999999999999999999998763
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.90 E-value=5.7e-23 Score=156.77 Aligned_cols=98 Identities=26% Similarity=0.389 Sum_probs=81.9
Q ss_pred cCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCccc
Q 027026 119 TPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEF 198 (229)
Q Consensus 119 p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~ 198 (229)
...+|+|++++|+|.++|||++++||+|.++++.|+|+|++..... +.++. .+.|.|+|.||++||.
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--------~~~~~-----~~eF~R~~~LP~~vd~ 69 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQD--------DHGYI-----SREFHRRYRLPSNVDQ 69 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEET--------TTEEE-----EEEEEEEEECCTTBCT
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccC--------CCCEE-----EEEEEEEEECCCCcCh
Confidence 3589999999999999999999999999999999999998754321 12232 3469999999999999
Q ss_pred CceEEEE-ECCEEEEEEeccCCC----CCceEeecC
Q 027026 199 EKIQAEV-KDGVLYITIPKASST----AKIVDINVQ 229 (229)
Q Consensus 199 ~~IkA~~-~nGvL~ItiPK~~~~----~k~i~I~iq 229 (229)
++|+|.| +||+|+|++||.+.. .+...|.||
T Consensus 70 ~~i~A~~s~~GvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 70 SALSCSLSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp TSCEEEECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred hHcEEEECCCCEEEEEEEccCcccccCCCCeEeeec
Confidence 9999999 899999999998764 255566654
No 7
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.88 E-value=1.7e-22 Score=152.81 Aligned_cols=95 Identities=20% Similarity=0.242 Sum_probs=78.9
Q ss_pred CeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccC
Q 027026 120 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFE 199 (229)
Q Consensus 120 ~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~ 199 (229)
.+||+|++++|+|.++|||++++||+|+++++.|+|+|++.... +++.+.+ ..|.|+|.||.+||.+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~--------~~~~~~~-----~eF~R~~~LP~~vd~~ 69 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERP--------DEHGFIA-----REFHRRYRLPPGVDPA 69 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECS--------STTCCEE-----EEEEEEEECCTTBCTT
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc--------CCCCEEE-----EEEEEEEECCCCcChh
Confidence 48999999999999999999999999999999999999986432 1233433 3499999999999999
Q ss_pred ceEEEE-ECCEEEEEEeccCCC-CCceEee
Q 027026 200 KIQAEV-KDGVLYITIPKASST-AKIVDIN 227 (229)
Q Consensus 200 ~IkA~~-~nGvL~ItiPK~~~~-~k~i~I~ 227 (229)
+|+|.| +||+|+|++||.+.. ++.+.|.
T Consensus 70 ~i~A~~s~nGvL~I~lPK~~~~~~~~~~i~ 99 (101)
T 2wj5_A 70 AVTSALSPEGVLSIQATPASAQASLPSPPA 99 (101)
T ss_dssp CCEEEECTTSEEEEEECBCCCCCSSCC---
T ss_pred HCEEEECCCCEEEEEEECCCcCCCCCCccc
Confidence 999999 899999999998653 5556554
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.87 E-value=4.5e-22 Score=146.01 Aligned_cols=83 Identities=18% Similarity=0.411 Sum_probs=70.4
Q ss_pred EEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceE
Q 027026 123 IRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQ 202 (229)
Q Consensus 123 I~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~Ik 202 (229)
+.|++++|.|.++|||++++||+|.++++.|+|+|++....+ +.. ..+|+|.|+|.||++||.++|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--------~~~-----~~~~~F~R~~~LP~~vd~~~i~ 68 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQD--------EHG-----YISRCFTRKYTLPPGVDPTQVS 68 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC--------------------CCCEEEEEEEECCTTCCGGGCE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccC--------CCC-----EEEEEEEEEEECCCCcChHHcE
Confidence 457899999999999999999999999999999999864321 111 2468999999999999999999
Q ss_pred EEEE-CCEEEEEEeccC
Q 027026 203 AEVK-DGVLYITIPKAS 218 (229)
Q Consensus 203 A~~~-nGvL~ItiPK~~ 218 (229)
|.|+ ||+|+|++||.+
T Consensus 69 A~~~~~GvL~I~lPK~k 85 (85)
T 3q9p_A 69 SSLSPEGTLTVEAPMPK 85 (85)
T ss_dssp EEECTTSEEEEEEECCC
T ss_pred EEECCCCEEEEEEEcCC
Confidence 9998 999999999964
No 9
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.86 E-value=1.6e-21 Score=174.47 Aligned_cols=97 Identities=22% Similarity=0.342 Sum_probs=86.0
Q ss_pred CCcCeEEEEeCC----EEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEEC
Q 027026 117 GRTPWAIRETEN----DYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIAL 192 (229)
Q Consensus 117 ~~p~~dI~E~~d----~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~L 192 (229)
+.|++||+|+++ +|+|.++|||++++||+|.+++|.|+|+|+++.+.+ + ++.+|.|.|+|.|
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e---------~-----~r~~g~F~R~~~L 162 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACG---------D-----AAMSESVGRSIPL 162 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTT---------C-----CCBCCCEEEEEEC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCC---------C-----CEEEEEEEEEEEC
Confidence 578899999999 999999999999999999999999999998863211 1 1688999999999
Q ss_pred CCCcccCceEEEEE-CCEEEEEEeccCCCCCceEee
Q 027026 193 PDNVEFEKIQAEVK-DGVLYITIPKASSTAKIVDIN 227 (229)
Q Consensus 193 P~~vd~~~IkA~~~-nGvL~ItiPK~~~~~k~i~I~ 227 (229)
|++||.++|+|.|+ ||||+|++||.++..+.|.|.
T Consensus 163 P~~Vd~e~i~A~~~~nGVL~I~lPK~~~~~~~I~it 198 (314)
T 2bol_A 163 PPSVDRNHIQATITTDDVLVIEAPVNEPNYKAIKLS 198 (314)
T ss_dssp CTTBCGGGCEEEECSSSEEEEEEEBSSCCTTTEEEE
T ss_pred CCCccccccEEEEeCCCEEEEEEeccCcccceeecc
Confidence 99999999999999 999999999998776666553
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.85 E-value=1.8e-21 Score=160.93 Aligned_cols=95 Identities=20% Similarity=0.389 Sum_probs=71.5
Q ss_pred CeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccC
Q 027026 120 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFE 199 (229)
Q Consensus 120 ~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~ 199 (229)
.+||+|++++|+|.++|||+++|||+|+++++.|+|+|+++...+ ++++.. .+|.|+|.||++||.+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~--------~~~~~~-----reF~R~~~LP~~Vd~~ 131 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD--------EHGFIS-----REFHRKYRIPADVDPL 131 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEE--------TTEEEE-----EEEEEEEECTTTCCTT
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEccccc--------CCceEE-----EEEEEEEECCCCcChh
Confidence 479999999999999999999999999999999999999864321 123332 3599999999999999
Q ss_pred ceEEEE-ECCEEEEEEeccCCCC--CceEee
Q 027026 200 KIQAEV-KDGVLYITIPKASSTA--KIVDIN 227 (229)
Q Consensus 200 ~IkA~~-~nGvL~ItiPK~~~~~--k~i~I~ 227 (229)
+|+|.| +||||+|++||.+... +.|.|+
T Consensus 132 ~i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~ 162 (175)
T 2klr_A 132 TITSSLSSDGVLTVNGPRKQVSGPERTIPIT 162 (175)
T ss_dssp TCEEEECTTSCEEEEEECC------------
T ss_pred HeEEEEcCCCEEEEEEECCCCCCCCeEEEEe
Confidence 999999 7999999999987543 445543
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.84 E-value=1.5e-20 Score=139.05 Aligned_cols=84 Identities=20% Similarity=0.373 Sum_probs=67.8
Q ss_pred EEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEE
Q 027026 124 RETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQA 203 (229)
Q Consensus 124 ~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA 203 (229)
.+++++|+|.++|||++++||+|.++++.|+|+|++.... ++..++. +.|.|+|.||.+||.++|+|
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~--------~~~~~~~-----~ef~R~~~LP~~vd~~~i~A 68 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQ--------DEHGFIS-----REFHRKYRIPADVDPLTITS 68 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEE--------CSSSEEE-----EEEEEEEECCTTBCGGGCEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc--------CCCCEEE-----EEEEEEEECCCCcChhHcEE
Confidence 3678999999999999999999999999999999986532 1233332 45999999999999999999
Q ss_pred EE-ECCEEEEEEeccCCC
Q 027026 204 EV-KDGVLYITIPKASST 220 (229)
Q Consensus 204 ~~-~nGvL~ItiPK~~~~ 220 (229)
.| +||+|+|++||.+..
T Consensus 69 ~~~~~GvL~I~~pK~~~~ 86 (90)
T 2y1y_A 69 SMSSDGVLTVNGPRKQVS 86 (90)
T ss_dssp EECTTSEEEEEECBC---
T ss_pred EECCCCEEEEEEEcCCCC
Confidence 99 899999999998653
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.79 E-value=2.5e-19 Score=160.20 Aligned_cols=91 Identities=21% Similarity=0.345 Sum_probs=72.5
Q ss_pred CcCeEEEEeC---CEEEEEEEc-CCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECC
Q 027026 118 RTPWAIRETE---NDYKIRLDV-PGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALP 193 (229)
Q Consensus 118 ~p~~dI~E~~---d~y~l~~dL-PG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP 193 (229)
...++|.+++ +.|.|.++| ||++++||+|++++|.|+|+|+++.+. ..++..|+.||.|.|+|.||
T Consensus 220 ~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~----------~~~~~~Er~~g~F~R~~~LP 289 (314)
T 2bol_A 220 KEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEE----------KTENASHSEHREFYKAFVTP 289 (314)
T ss_dssp CCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC----------------------CEEEEEEEECS
T ss_pred CCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccC----------CceEEEEEeeeEEEEEEECC
Confidence 3447777755 589999999 999999999999999999999986421 24677899999999999999
Q ss_pred CCcccCceEEEEECCEEEEEEeccC
Q 027026 194 DNVEFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 194 ~~vd~~~IkA~~~nGvL~ItiPK~~ 218 (229)
++||.++|+|+|+||||+|++||.+
T Consensus 290 ~~vd~~~i~A~~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 290 EVVDASKTQAEIVDGLMVVEAPLFK 314 (314)
T ss_dssp SEECGGGCEEEEETTEEEEEEEEEC
T ss_pred CCcChHHeEEEEeCCEEEEEEecCC
Confidence 9999999999999999999999964
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.97 E-value=1.8e-09 Score=82.20 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=72.6
Q ss_pred CCcCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCc
Q 027026 117 GRTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV 196 (229)
Q Consensus 117 ~~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~v 196 (229)
..+.++++++++.+.|.+++||+.+++++|.++++.|.|++.... ...|...+.|+..|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~---------------------~~~y~~~~~L~~~I 66 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS---------------------GEDYNLKLELLHPI 66 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT---------------------SSEEEEEECBSSCC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC---------------------CcEEEEEeeCCCcC
Confidence 356799999999999999999999999999999999999985410 03677889999999
Q ss_pred ccCceEEEEECCEEEEEEeccCC
Q 027026 197 EFEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 197 d~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
+++..++.+.+|.|+|+|+|.+.
T Consensus 67 ~~e~s~~~~~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 67 IPEQSTFKVLSTKIEIKLKKPEA 89 (114)
T ss_dssp CGGGEEEEECSSSEEEEEECSSC
T ss_pred CccccEEEEECCEEEEEEEcCCC
Confidence 99999999999999999999864
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.96 E-value=2e-09 Score=78.56 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=71.7
Q ss_pred CcCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcc
Q 027026 118 RTPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVE 197 (229)
Q Consensus 118 ~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd 197 (229)
.+.++++++++.+.|.+.+||+.+++++|.++++.|.|++... . ...|...+.|+..|+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~----~-----------------~~~y~~~~~L~~~I~ 60 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP----G-----------------EDAYYLQPRLFGKII 60 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCT----T-----------------SCCEEECCBBSSCBC
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcC----C-----------------CcEEEEeeEcCCccC
Confidence 4579999999999999999999999999999999999998431 0 035778899999999
Q ss_pred cCceEEEEECCEEEEEEeccCC
Q 027026 198 FEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 198 ~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
++..++.+.+|.|+|+|.|.+.
T Consensus 61 ~~~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 61 PDKCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp GGGCEEEECSSCEEEEEEBSSS
T ss_pred chhEEEEEECCEEEEEEEcCCC
Confidence 9999999999999999999865
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.25 E-value=2.1e-05 Score=59.94 Aligned_cols=79 Identities=14% Similarity=0.324 Sum_probs=69.4
Q ss_pred CCCcCeEEEEeCCEEEEEEEcCCCC--CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECC
Q 027026 116 RGRTPWAIRETENDYKIRLDVPGMS--RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALP 193 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLPG~~--kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP 193 (229)
...|.+.|.++++.++|.+.+|-+. ..++++.|+|+.+.... ..|--++.||
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~--------------------------~PYyLRL~lP 68 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL--------------------------SPYYLRLRFP 68 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE--------------------------TTEEEEEECS
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec--------------------------CCeEEEEecC
Confidence 4577899999999999999999876 88999999999999987 3466789999
Q ss_pred CCc-ccCceEEEEE--CCEEEEEEeccCCC
Q 027026 194 DNV-EFEKIQAEVK--DGVLYITIPKASST 220 (229)
Q Consensus 194 ~~v-d~~~IkA~~~--nGvL~ItiPK~~~~ 220 (229)
..| +-+.-+|+|+ +|.++|++||....
T Consensus 69 ~~vved~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 69 HELIDDERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp SCEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred cceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence 999 6677899997 99999999998754
No 16
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.24 E-value=2.7e-06 Score=77.42 Aligned_cols=71 Identities=23% Similarity=0.360 Sum_probs=61.4
Q ss_pred cCeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCccc
Q 027026 119 TPWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEF 198 (229)
Q Consensus 119 p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~ 198 (229)
.|+.|... .|.+++.|||+++++|++...|+.|+|++ |.|+|.|.||..+..
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~~--------------------------g~~rR~i~LP~~L~~ 349 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVEA--------------------------GDQRRNIFLPPALSG 349 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEEE--------------------------TTEEEEEECCTTTTT
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEEE--------------------------CCEeecccCCHHHcC
Confidence 45666444 79999999999999999999999999998 889999999988844
Q ss_pred -CceEEEEECCEEEEEEecc
Q 027026 199 -EKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 199 -~~IkA~~~nGvL~ItiPK~ 217 (229)
.-..|+|+||.|.|++-..
T Consensus 350 ~~v~~A~~~~~~L~i~~~~~ 369 (374)
T 3igf_A 350 RPITGAKFQNNYLIISFLEH 369 (374)
T ss_dssp CCEEEEEEETTEEEEEECCC
T ss_pred CCccccEEECCEEEEEEehh
Confidence 4588999999999998643
No 17
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.18 E-value=3.3e-06 Score=66.29 Aligned_cols=76 Identities=14% Similarity=0.362 Sum_probs=67.8
Q ss_pred CcCeEEEEeCCEEEEEEEcCCCC--CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCC
Q 027026 118 RTPWAIRETENDYKIRLDVPGMS--RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDN 195 (229)
Q Consensus 118 ~p~~dI~E~~d~y~l~~dLPG~~--kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~ 195 (229)
.|.+.|.++++.++|.+.+|... ..++++.|++..+.... ..|.-++.||..
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~--------------------------~PYyLRL~LP~~ 56 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL--------------------------SPYYLRLRFPHE 56 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS--------------------------SSSCEEECCSSC
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec--------------------------CCeEEEecCCCe
Confidence 56789999999999999999999 89999999999998876 235567999999
Q ss_pred c-ccCceEEEEE--CCEEEEEEeccCC
Q 027026 196 V-EFEKIQAEVK--DGVLYITIPKASS 219 (229)
Q Consensus 196 v-d~~~IkA~~~--nGvL~ItiPK~~~ 219 (229)
| +.+..+|+|+ .|.|+|++||...
T Consensus 57 V~e~~~~kA~YD~d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 57 LIDDERSTAQYDSKDECINVKVAKLNK 83 (134)
T ss_dssp EECCSSCEEEEETTTTEEEEEEEESST
T ss_pred eecCCCcceeEeccCCEEEEEEeCCCC
Confidence 9 8888999997 8999999999764
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.80 E-value=0.00024 Score=54.86 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=68.9
Q ss_pred CcCeEEEEeCCEEEEEEEcCCC---CCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEE-CC
Q 027026 118 RTPWAIRETENDYKIRLDVPGM---SRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIA-LP 193 (229)
Q Consensus 118 ~p~~dI~E~~d~y~l~~dLPG~---~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~-LP 193 (229)
.+.++++++.+.+.|.+.+||+ .++++.|.+..+.|.|.+.... + ..|.-.+. |-
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~------------~---------~~y~~~~~~L~ 78 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN------------G---------KSYSMIVNNLL 78 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS------------S---------SCEEEEEECBS
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC------------C---------CcEEEEhHHhc
Confidence 4579999999999999999999 8999999999999999873210 0 24666775 99
Q ss_pred CCcccCceEEEEECCEEEEEEeccCC
Q 027026 194 DNVEFEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 194 ~~vd~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
..|+++..+..+..+.++|+|-|.+.
T Consensus 79 ~~I~~e~S~~~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 79 KPISVEGSSKKVKTDTVLILCRKKVE 104 (127)
T ss_dssp SCCCTTTCEEEEETTEEEEEEECSSS
T ss_pred CccCcccCEEEEeCCEEEEEEEECCC
Confidence 99999999999999999999999874
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.77 E-value=0.00019 Score=56.29 Aligned_cols=90 Identities=16% Similarity=0.136 Sum_probs=70.5
Q ss_pred CcCeEEEEe-CCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeee---eEEEEEECC
Q 027026 118 RTPWAIRET-ENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYG---SYSTRIALP 193 (229)
Q Consensus 118 ~p~~dI~E~-~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g---~f~r~i~LP 193 (229)
.+.++++++ .+.+.|.|.++++.+++++|.+..+.|.|........ .....-..| .|.-.+.|-
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~------------~l~~~~a~g~~~~y~~~~~L~ 86 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGN------------FLRLHPGCGPHTTFRWQVKLR 86 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHH------------HHHHSTTCCTTSCEEEEEEBS
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCc------------ccccccccCcceeEEEecccc
Confidence 567999999 9999999999999999999999999999987432100 000000001 566778999
Q ss_pred CCcccCceEEEEECCEEEEEEeccCC
Q 027026 194 DNVEFEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 194 ~~vd~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
..|+++..+..+..+.++|+|.|.+.
T Consensus 87 ~~I~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 87 NLIEPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEESSS
T ss_pred ccCCchhCEEEEeCCEEEEEEEECCC
Confidence 99999998988999999999999764
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.71 E-value=0.00049 Score=52.83 Aligned_cols=83 Identities=14% Similarity=0.217 Sum_probs=68.2
Q ss_pred CCCcCeEEEEeCCEEEEEEEcC-CC-CCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECC
Q 027026 116 RGRTPWAIRETENDYKIRLDVP-GM-SRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALP 193 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLP-G~-~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP 193 (229)
...+.+.+.++.+++.|.+.|| |+ +++||+|.+..+.|.|.+.... + ..+.-...|.
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~------------~---------~~~~~~~~L~ 75 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEEN------------G---------ERVLMEGKLT 75 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSS------------S---------EEEEEEEEBS
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccC------------C---------CceEEccccc
Confidence 3467899999999999999999 88 8999999999999999874310 0 1223457899
Q ss_pred CCcccCceEEEEECCE-EEEEEeccCC
Q 027026 194 DNVEFEKIQAEVKDGV-LYITIPKASS 219 (229)
Q Consensus 194 ~~vd~~~IkA~~~nGv-L~ItiPK~~~ 219 (229)
..|+++..+..+.+|- |.|+|-|.+.
T Consensus 76 ~~I~~e~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 76 HKINTESSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp SCBCTTTCEEEECTTSEEEEEECBSSS
T ss_pred CcCCCcCCEEEEeCCCEEEEEEEECCC
Confidence 9999999999999885 9999999764
No 21
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.70 E-value=0.00024 Score=55.07 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=65.8
Q ss_pred CCcCeEEEEeCCEEEEEEEcC-C--CCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECC
Q 027026 117 GRTPWAIRETENDYKIRLDVP-G--MSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALP 193 (229)
Q Consensus 117 ~~p~~dI~E~~d~y~l~~dLP-G--~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP 193 (229)
..+.+.+.++.+.+.|.+.|| | ++++||+|.+..+.|.|.... ... .-...|.
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg--------------~~~----------~~~~~L~ 61 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKG--------------QPP----------VVDGELY 61 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETT--------------SCC----------SBCSCBS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECC--------------ceE----------EEecccc
Confidence 467899999999999999999 6 899999999999999998621 000 1134688
Q ss_pred CCcccCceEEEEECC-EEEEEEeccCC
Q 027026 194 DNVEFEKIQAEVKDG-VLYITIPKASS 219 (229)
Q Consensus 194 ~~vd~~~IkA~~~nG-vL~ItiPK~~~ 219 (229)
..|+++..+..+.+| .|.|+|-|.+.
T Consensus 62 ~~I~~e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 62 NEVKVEESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp SCBCSTTCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccCEEEEcCCCEEEEEEEECCC
Confidence 899999999999998 89999999864
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.66 E-value=0.00047 Score=52.83 Aligned_cols=80 Identities=14% Similarity=0.190 Sum_probs=66.3
Q ss_pred CCCcCeEEEEeCCEEEEEEEcC-C--CCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEEC
Q 027026 116 RGRTPWAIRETENDYKIRLDVP-G--MSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIAL 192 (229)
Q Consensus 116 ~~~p~~dI~E~~d~y~l~~dLP-G--~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~L 192 (229)
...+.+.+.++.+.+.|.+.|| | ++.+||+|.+..+.|.|.... . .+.-...|
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg--------------~----------~~~~~g~L 69 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG--------------Q----------PAIIDGEL 69 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT--------------S----------CCSEEEEB
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC--------------c----------ceEEeccc
Confidence 4577899999999999999999 4 799999999999999887521 0 01124579
Q ss_pred CCCcccCceEEEEECC-EEEEEEeccCC
Q 027026 193 PDNVEFEKIQAEVKDG-VLYITIPKASS 219 (229)
Q Consensus 193 P~~vd~~~IkA~~~nG-vL~ItiPK~~~ 219 (229)
...|+++.....+++| .|.|+|-|.+.
T Consensus 70 ~~~I~~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 70 YNEVKVEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp SSCBCGGGCEEEEETTTEEEEEEEBSSS
T ss_pred cccccccccEEEEcCCCEEEEEEEECCC
Confidence 9999999999999998 99999999754
No 23
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.58 E-value=0.00082 Score=52.08 Aligned_cols=76 Identities=13% Similarity=0.226 Sum_probs=62.9
Q ss_pred CcCeEEEEeCCEEEEEEEcC-CCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCc
Q 027026 118 RTPWAIRETENDYKIRLDVP-GMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV 196 (229)
Q Consensus 118 ~p~~dI~E~~d~y~l~~dLP-G~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~v 196 (229)
.+.+.+.++.+.+.|.|.|| |+++++|+|.+..+.|.|.+.. .. .-...|...|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g------------------------~~-~~~~~L~~~I 58 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQG------------------------EI-VIDGELLHEV 58 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETT------------------------EE-EEEEEBSSCE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECC------------------------Ee-eEcccccccc
Confidence 46799999999999999996 9999999999999999998621 01 2346899999
Q ss_pred ccCceEEEEECCEEEEEEeccC
Q 027026 197 EFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 197 d~~~IkA~~~nGvL~ItiPK~~ 218 (229)
+++..+..+.+|-|.|+|-|.+
T Consensus 59 ~~e~S~w~i~~~kv~i~L~K~~ 80 (131)
T 2o30_A 59 DVSSLWWVINGDVVDVNVTKKR 80 (131)
T ss_dssp EEEEEEEEEETTEEEEEEEESS
T ss_pred ccccCEEEEeCCEEEEEEEECC
Confidence 9999999999999999999974
No 24
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.54 E-value=0.00067 Score=52.18 Aligned_cols=78 Identities=17% Similarity=0.100 Sum_probs=66.3
Q ss_pred CeEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccC
Q 027026 120 PWAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFE 199 (229)
Q Consensus 120 ~~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~ 199 (229)
.++++++.+.+.|.+.+|+. ++++|.++.+.|.+++..... ...|.-.+.|-..|+++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~--------------------~~~y~~~l~L~~~I~~e 62 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD--------------------NFKHLNEIDLFHCIDPN 62 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT--------------------TEEEEEEEEBSSCEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC--------------------CceEEEEEEccceeccc
Confidence 69999999999999999995 799999999999999854110 02477788999999999
Q ss_pred ceEEEEECCEEEEEEeccCC
Q 027026 200 KIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 200 ~IkA~~~nGvL~ItiPK~~~ 219 (229)
..+..+.++.+.|+|.|.+.
T Consensus 63 ~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 63 DSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp EEEEEECSSCEEEEEEESST
T ss_pred cCEEEECCCEEEEEEEECCC
Confidence 99999988999999999763
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.32 E-value=0.0022 Score=51.30 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCcCeEEEEeCCEEEEEEEcC-CCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCC
Q 027026 117 GRTPWAIRETENDYKIRLDVP-GMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDN 195 (229)
Q Consensus 117 ~~p~~dI~E~~d~y~l~~dLP-G~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~ 195 (229)
..+.+.+.++.+.+.|.|.|| |++.+||+|.+..+.|.|.+.. . .+ -...|...
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg---------------~---------~~-l~g~L~~~ 66 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG---------------R---------EI-LKGKLFDS 66 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETT---------------E---------EE-EEEEBSSC
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECC---------------E---------EE-Eeeccccc
Confidence 356799999999999999998 8999999999999999998621 0 12 34679999
Q ss_pred cccCceEEEEECCE-EEEEEeccCC
Q 027026 196 VEFEKIQAEVKDGV-LYITIPKASS 219 (229)
Q Consensus 196 vd~~~IkA~~~nGv-L~ItiPK~~~ 219 (229)
|+++..+..+.+|- |.|+|-|.+.
T Consensus 67 I~~eeS~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 67 TIADEGTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp BCGGGCEEEEECCCEEEEEEEBSSC
T ss_pred cCccccEEEEcCCcEEEEEEEEcCC
Confidence 99999999999885 9999999874
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.16 E-value=0.0015 Score=52.02 Aligned_cols=78 Identities=13% Similarity=0.199 Sum_probs=65.3
Q ss_pred CcCeEEEEeCCEEEEEEEcCCCCCCceEEEEE-CCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCc
Q 027026 118 RTPWAIRETENDYKIRLDVPGMSRNDVKVRVE-ESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNV 196 (229)
Q Consensus 118 ~p~~dI~E~~d~y~l~~dLPG~~kedV~V~v~-~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~v 196 (229)
.|.++++++.+.++|.|.+|++ ++++|.++ .+.|.+++.. .. ...|.-.+.|=..|
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~---~~------------------~~~y~~~l~L~~~I 60 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALG---AQ------------------GERFEFSLELYGKI 60 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEET---TT------------------TEEEEEEEEBSSCE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEc---CC------------------CceEEEEeEhhhcc
Confidence 4679999999999999999997 58999999 7899999851 00 03577788999999
Q ss_pred ccCceEEEEECCEEEEEEeccCC
Q 027026 197 EFEKIQAEVKDGVLYITIPKASS 219 (229)
Q Consensus 197 d~~~IkA~~~nGvL~ItiPK~~~ 219 (229)
+++ .+..+...-++|+|.|.+.
T Consensus 61 dpe-S~~~v~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 61 MTE-YRKNVGLRNIIFSIQKEER 82 (150)
T ss_dssp EEE-EEEEEESSSEEEEEEECCS
T ss_pred ccc-ceEEecCCEEEEEEEECCC
Confidence 999 8888888889999999764
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.00035 Score=54.53 Aligned_cols=84 Identities=17% Similarity=0.246 Sum_probs=60.4
Q ss_pred CcCeEEEEeCCE-------EEEEEEcCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEE
Q 027026 118 RTPWAIRETEND-------YKIRLDVPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRI 190 (229)
Q Consensus 118 ~p~~dI~E~~d~-------y~l~~dLPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i 190 (229)
.|.+++.++.+. +.|.+.+|++. +++|.++.+.|.|++...... +.. ....|.-.+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~----------g~~-----~~~~y~~~l 68 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHV----------GDE-----NVHHYQLHI 68 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC----------------------CEEBCEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEeccccc----------CCc-----cCceEEEEE
Confidence 456777787766 99999999974 899999999999987542100 000 002466778
Q ss_pred ECCCCcccCceEEEEECCE-EEEEEeccC
Q 027026 191 ALPDNVEFEKIQAEVKDGV-LYITIPKAS 218 (229)
Q Consensus 191 ~LP~~vd~~~IkA~~~nGv-L~ItiPK~~ 218 (229)
.|...|+++..+..+.++. |.|+|.|.+
T Consensus 69 ~L~~~Idpe~S~~~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 69 DLYKEIIPEKTMHKVANGQHYFLKLYKKD 97 (134)
T ss_dssp ECSSCCCSSSEEEEECCC--CEEEEEECS
T ss_pred EChhhccccccEEEECCCEEEEEEEEECC
Confidence 9999999999999999998 999999977
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=78.58 E-value=4.5 Score=28.14 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=29.4
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEeccC
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~~ 218 (229)
..|.-.+.|| +++++.|+..+.+|.|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 4677889999 799999999999999999987654
No 29
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=74.59 E-value=12 Score=26.81 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=27.1
Q ss_pred EEEEEEcC-CCCCCceEEEEECCEEEEEEEEec
Q 027026 130 YKIRLDVP-GMSRNDVKVRVEESMLVIKAEKAQ 161 (229)
Q Consensus 130 y~l~~dLP-G~~kedV~V~v~~~~L~I~g~~~~ 161 (229)
|.-.+.|| +++.+.++-.+++|.|+|+..+..
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~ 95 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGGVLTVRFEKLR 95 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETTEEEEEEEBSS
T ss_pred EEEEEECCCCcchhHcEEEEECCEEEEEEEccC
Confidence 44478899 699999999999999999987643
No 30
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=71.58 E-value=8.3 Score=28.09 Aligned_cols=19 Identities=11% Similarity=0.427 Sum_probs=16.3
Q ss_pred CCceEEEEECCEEEEEEEE
Q 027026 141 RNDVKVRVEESMLVIKAEK 159 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~ 159 (229)
++.|+|.++++.++|+|.+
T Consensus 20 P~gV~V~i~~~~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETTEEEEEETT
T ss_pred CCCCEEEEeCCEEEEECCC
Confidence 4788999999999999943
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=71.22 E-value=6.6 Score=27.52 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=28.9
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
..|.-.+.|| +++.+.|+..+.+|.|+|..-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 4677789999 79999999999999999998654
No 32
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=70.99 E-value=8.3 Score=27.26 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.4
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEeccC
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~~ 218 (229)
..|.-.+.|| +++.+.|+..+++|.|+|..-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 4677889999 699999999999999999976643
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=69.22 E-value=8.1 Score=28.02 Aligned_cols=32 Identities=9% Similarity=0.171 Sum_probs=28.6
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEec
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPK 216 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK 216 (229)
..|.-.+.|| +++++.|+..+.+|.|+|.--+
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~ 43 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKH 43 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEEE
Confidence 4678889999 7999999999999999999854
No 34
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=68.77 E-value=4.4 Score=27.79 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=18.6
Q ss_pred CceEEEEECCEEEEEEeccCCCCCceEeec
Q 027026 199 EKIQAEVKDGVLYITIPKASSTAKIVDINV 228 (229)
Q Consensus 199 ~~IkA~~~nGvL~ItiPK~~~~~k~i~I~i 228 (229)
..|+|.|+||||.--=|-.-++...+.|.|
T Consensus 3 k~IeAiYEnGVfkPLe~l~L~EG~kV~I~I 32 (69)
T 2nwt_A 3 KIIEAVYENGVFKPLQKVDLKEGERVKIKL 32 (69)
T ss_dssp CCEEEEEETTEEEESSCCCCCTTEEEEEEC
T ss_pred ceEEEEEECCEEeECCcCCCCCCCEEEEEE
Confidence 459999999999744333323344555544
No 35
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=68.55 E-value=7.8 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=29.4
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEeccC
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~~ 218 (229)
..|.-.+.|| +++.+.|+..+.+|.|+|..-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 4577789999 899999999999999999987643
No 36
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=65.79 E-value=14 Score=27.33 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=30.0
Q ss_pred eeEEEEEECCCCcccCceEEEEEC-CEEEEEEeccCC
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKD-GVLYITIPKASS 219 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~n-GvL~ItiPK~~~ 219 (229)
..|.-.+.|| +++.+.|+..+.+ |.|+|+.-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 4677789999 6999999999999 999999887553
No 37
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=65.17 E-value=12 Score=28.97 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=28.1
Q ss_pred eEEEEEECCCCcccCceEEEEECCEEEEEEeccC
Q 027026 185 SYSTRIALPDNVEFEKIQAEVKDGVLYITIPKAS 218 (229)
Q Consensus 185 ~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~~ 218 (229)
.|.-.+.|| +++.+.|+..+++|+|+|+.-+..
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 556678899 689999999999999999987655
No 38
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=63.62 E-value=15 Score=30.41 Aligned_cols=46 Identities=15% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
++.|+|.++++.++|+|.+ |...+.| +.. |+...+||.|.|+.+..
T Consensus 39 P~gV~V~i~~~~VtVKGPk------------------------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPK------------------------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCC------------------------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 4788999999999999944 6665544 443 45567899988886543
No 39
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=62.65 E-value=13 Score=29.96 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=33.5
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
++.|+|.++++.++|+|.+ |..++.|. +.. ++...+||.|.|+.+..
T Consensus 9 P~gV~v~i~~~~vtVkGpk------------------------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDN------------------------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETT------------------------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC------------------------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 4789999999999999943 66665442 333 45557899988876543
No 40
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=62.46 E-value=20 Score=28.82 Aligned_cols=46 Identities=22% Similarity=0.375 Sum_probs=33.7
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
++.|+|.++++.++|+|.+ |...+.| +.. ++...+||.|.|+.+..
T Consensus 11 P~gV~V~i~~~~VtVkGpk------------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPK------------------------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETT------------------------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCC------------------------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 4788999999999999933 6666554 544 44557899988876543
No 41
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=53.53 E-value=15 Score=29.70 Aligned_cols=45 Identities=29% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEe
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIP 215 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiP 215 (229)
|+.|+|.++++.++|+|.+ |...+.|.-| + ++-.++++.|.|...
T Consensus 14 P~gV~v~i~~~~V~VkGpk------------------------G~L~~~~~~~-~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPK------------------------GELEREFFWP-G-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEESSSEEEEECSS------------------------CEEEEECCCT-T-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEcCC------------------------eEEEEEecCC-c-----EEEEEeCCEEEEEEC
Confidence 4789999999999999943 6665554322 2 444578898888753
No 42
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=53.12 E-value=17 Score=28.95 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=28.6
Q ss_pred eeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 184 GSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 184 g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
..|.-.+.|| +++++.|+..+.+|.|+|.--+.
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 4677789999 79999999999999999998654
No 43
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=51.96 E-value=35 Score=27.67 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=32.1
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEE--ECCEEEEEEec
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEV--KDGVLYITIPK 216 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~--~nGvL~ItiPK 216 (229)
|+.|+|.++++.++|+|.+ |...+.|. +. .++..+ +++.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk------------------------G~L~~~~~-~~-----~v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPR------------------------GKLTRNFK-HL-----NLDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEETTEEEEEETT------------------------EEEEEECC-CT-----TEEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEeCCEEEEECCC------------------------ceEEEEcc-CC-----cEEEEEEcCCCEEEEEECC
Confidence 5789999999999999933 66655443 12 244455 78888887653
No 44
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=51.73 E-value=23 Score=27.20 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=28.0
Q ss_pred EEEEEEEcC-CCCCCceEEEEECCEEEEEEEEec
Q 027026 129 DYKIRLDVP-GMSRNDVKVRVEESMLVIKAEKAQ 161 (229)
Q Consensus 129 ~y~l~~dLP-G~~kedV~V~v~~~~L~I~g~~~~ 161 (229)
.|.-.+.|| +++.+.|+-.+++|.|+|+..+..
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~ 138 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETTEEEEEEECCC
T ss_pred EEEEEEECCCCccccceEEEEECCEEEEEEEccC
Confidence 466678999 789999999999999999987643
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=48.25 E-value=38 Score=27.13 Aligned_cols=44 Identities=23% Similarity=0.419 Sum_probs=31.8
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEe
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIP 215 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiP 215 (229)
++.|+|.++++.++|+|-+ |...+.| +..+ +-.++++.|.|...
T Consensus 12 P~gV~v~i~~~~v~VkGpk------------------------G~L~~~~--~~~v-----~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPK------------------------GELEVPV--SPEM-----RVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSS------------------------CEEEEEC--CTTS-----EEEEETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCC------------------------cEEEEEe--CCCE-----EEEEECCEEEEEEC
Confidence 5789999999999999933 5555544 4443 44567998888753
No 46
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=44.70 E-value=58 Score=26.32 Aligned_cols=46 Identities=9% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEE-EECCEEEEEEec
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAE-VKDGVLYITIPK 216 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~-~~nGvL~ItiPK 216 (229)
|+.|+|.++++.++|+|.+ |...+.| +. + .+.-. .++|.|.|..+.
T Consensus 13 P~gV~v~i~~~~V~VkGPk------------------------G~L~~~~--~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPR------------------------GTLTKNL--KH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEETTEEEEEETT------------------------EEEEEEC--TT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEeCCEEEEEcCC------------------------eEEEEEc--cC-C---cEEEEEecCCeEEEEECC
Confidence 5889999999999999933 6665544 32 1 23334 468998888654
No 47
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=39.45 E-value=33 Score=25.90 Aligned_cols=16 Identities=31% Similarity=0.607 Sum_probs=14.3
Q ss_pred eEEEEECCEEEEEEec
Q 027026 201 IQAEVKDGVLYITIPK 216 (229)
Q Consensus 201 IkA~~~nGvL~ItiPK 216 (229)
+.+++.+|||+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 7889999999999974
No 48
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=37.72 E-value=52 Score=26.64 Aligned_cols=51 Identities=8% Similarity=0.115 Sum_probs=33.9
Q ss_pred cCCCCCCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCE---EEE
Q 027026 136 VPGMSRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGV---LYI 212 (229)
Q Consensus 136 LPG~~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGv---L~I 212 (229)
.|=-=++.|+|.++++.++|+|.+ |...+. ||.. .|+...++|. |.|
T Consensus 8 ~pI~IP~gV~V~i~~~~VtVkGpk------------------------G~L~~~--~~~~----~v~i~~~~~~~~~i~v 57 (192)
T 2zkr_e 8 QTVDIPENVDITLKGRTVIVKGPR------------------------GTLRRD--FNHI----NVELSLLGKKKKRLRV 57 (192)
T ss_dssp --CCCCTTCEEEEETTEEEEEETT------------------------EEEEEE--CCSS----SCEEEEETTTTCEEEE
T ss_pred CcEEcCCCCEEEEeCCEEEEECCC------------------------eEEEEE--eCCC----CEEEEEecCceeEEEE
Confidence 343446889999999999999933 665554 4431 3455678888 777
Q ss_pred EEec
Q 027026 213 TIPK 216 (229)
Q Consensus 213 tiPK 216 (229)
+.+.
T Consensus 58 ~~~~ 61 (192)
T 2zkr_e 58 DKWW 61 (192)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 7554
No 49
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=37.56 E-value=41 Score=27.18 Aligned_cols=20 Identities=10% Similarity=0.250 Sum_probs=17.2
Q ss_pred CCCceEEEEECCEEEEEEEE
Q 027026 140 SRNDVKVRVEESMLVIKAEK 159 (229)
Q Consensus 140 ~kedV~V~v~~~~L~I~g~~ 159 (229)
=|+.|+|.++++.++|+|.+
T Consensus 12 IP~gV~v~i~~~~V~VkGPk 31 (188)
T 4a17_E 12 IPDKVTITAKQRVVEVKGPL 31 (188)
T ss_dssp CCTTCEEEEETTEEEEEETT
T ss_pred CCCCcEEEEeCCEEEEEcCC
Confidence 36899999999999999933
No 50
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=35.84 E-value=26 Score=25.66 Aligned_cols=17 Identities=41% Similarity=0.655 Sum_probs=14.6
Q ss_pred ceEEEEECCEEEEEEec
Q 027026 200 KIQAEVKDGVLYITIPK 216 (229)
Q Consensus 200 ~IkA~~~nGvL~ItiPK 216 (229)
.+.+.+.+|||+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 37889999999999973
No 51
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=34.17 E-value=16 Score=30.59 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=32.1
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEecc
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIPKA 217 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiPK~ 217 (229)
++.|+|.++++.++|+|.+ |...+. |+.+++.. ..+||.|.|+.+..
T Consensus 54 P~gV~V~i~~~~VtVKGPk------------------------G~L~~~--~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPL------------------------GELALT--YPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSSEEEECCSS------------------------CCEEEE--CCSSCEEE----ECSSSCEEEECSSC
T ss_pred CCCCEEEEeCCEEEEECCC------------------------eEEEEE--cCCCEEEE----EecCCEEEEEcCCC
Confidence 4778899999999999943 555544 45544331 45788888876653
No 52
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=29.24 E-value=48 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=29.5
Q ss_pred CCEEEEEEEcCC-CCCCceEEEEECCEEEEEEEEe
Q 027026 127 ENDYKIRLDVPG-MSRNDVKVRVEESMLVIKAEKA 160 (229)
Q Consensus 127 ~d~y~l~~dLPG-~~kedV~V~v~~~~L~I~g~~~ 160 (229)
+..|.+.++|++ +.+++.+..+.++.|.|.-.+.
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 568999999996 7999999999999999987663
No 53
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=28.70 E-value=1.4e+02 Score=22.07 Aligned_cols=40 Identities=5% Similarity=0.174 Sum_probs=28.5
Q ss_pred CceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEE
Q 027026 174 EEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITI 214 (229)
Q Consensus 174 ~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~Iti 214 (229)
..|.|..+. ....-.|.||.+++.+.++..+...-|.|.+
T Consensus 5 ~~y~W~Qt~-~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 5 AKYTWDQEL-NEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp CCCEEEEET-TEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CcEEEEecC-CEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 345665433 3455679999999999999999999999987
No 54
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=28.68 E-value=79 Score=23.20 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=29.1
Q ss_pred EEEeCCEEEEEEEc-CCCCCCceEEEEECCEEEEEEEEe
Q 027026 123 IRETENDYKIRLDV-PGMSRNDVKVRVEESMLVIKAEKA 160 (229)
Q Consensus 123 I~E~~d~y~l~~dL-PG~~kedV~V~v~~~~L~I~g~~~ 160 (229)
+.+.++.+.|.+.+ ||.+++.| ..++++.|.|+..-.
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~Ap 45 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAP 45 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCC
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecC
Confidence 45677889998888 99999987 457888898886544
No 55
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=26.21 E-value=32 Score=27.46 Aligned_cols=43 Identities=19% Similarity=0.380 Sum_probs=30.6
Q ss_pred CCceEEEEECCEEEEEEEEecccccCCCCCCCCCceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEE
Q 027026 141 RNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITI 214 (229)
Q Consensus 141 kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~Iti 214 (229)
++.|+|.++++.++|+|-+ |...+.| +.. ++-.++++.|.|..
T Consensus 11 P~gV~v~i~~~~V~VkGpk------------------------G~L~~~~--~~~-----v~i~~~~~~l~v~~ 53 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKN------------------------GELTRTL--NDA-----VEVKHADNTLTFGP 53 (176)
T ss_dssp CTTCCCEESSSEEECCBTT------------------------BCCEEEC--CSS-----CEEEEETTEEEEEC
T ss_pred CCCcEEEEeCCEEEEEcCC------------------------EEEEEEC--CCC-----EEEEEeCCEEEEEE
Confidence 5788999999999999833 5544444 544 44457889888873
No 56
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=24.87 E-value=61 Score=26.61 Aligned_cols=39 Identities=10% Similarity=0.128 Sum_probs=28.7
Q ss_pred eEEEEeCCEEEEEEEcCCCCCCceEEEEECCEEEEEEEE
Q 027026 121 WAIRETENDYKIRLDVPGMSRNDVKVRVEESMLVIKAEK 159 (229)
Q Consensus 121 ~dI~E~~d~y~l~~dLPG~~kedV~V~v~~~~L~I~g~~ 159 (229)
+.+...++.+.|+++-+.--.+.|++.+++++|.|+-+.
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~ 72 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKS 72 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECB
T ss_pred EEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcC
Confidence 444555456777777765556899999999999998754
No 57
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=23.20 E-value=1.3e+02 Score=25.35 Aligned_cols=43 Identities=14% Similarity=0.177 Sum_probs=27.1
Q ss_pred CCCceEEEEECCEEEEEEEEecccccCCCCCCCCCce-eeeeeeeeeEEEEEECCCC
Q 027026 140 SRNDVKVRVEESMLVIKAEKAQRNEANTDGSTVEEEE-EWPSNGYGSYSTRIALPDN 195 (229)
Q Consensus 140 ~kedV~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~-~~~er~~g~f~r~i~LP~~ 195 (229)
.++++.| +++.|+|++.+.. .+.. ......+|.|+-++.||..
T Consensus 31 ~~~Nv~v--~~G~L~L~~~k~t-----------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQGSLTIWLDSTS-----------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETTEEEEEECSSC-----------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECCEEEEEEecCC-----------CCEEEECceEeeEEEEEEEEeCCC
Confidence 3556655 7788888874421 0111 1234578999999999964
No 58
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=21.37 E-value=44 Score=22.75 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=19.6
Q ss_pred CCCCCceEEEEECCEEEEEEEEec
Q 027026 138 GMSRNDVKVRVEESMLVIKAEKAQ 161 (229)
Q Consensus 138 G~~kedV~V~v~~~~L~I~g~~~~ 161 (229)
.|+.+.|.+...-+.|.|+|+.-.
T Consensus 17 sFd~e~i~L~T~~G~L~IkG~~L~ 40 (71)
T 2ks0_A 17 SFDPKEILLETIQGVLSIKGEKLG 40 (71)
T ss_dssp EECSSEEEEEETTEEEEEEEECCC
T ss_pred EECCCEEEEEeCceEEEEEcCCcE
Confidence 467888999999999999997644
No 59
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=20.78 E-value=2.1e+02 Score=21.95 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=31.9
Q ss_pred CceeeeeeeeeeEEEEEECCCCcccCceEEEEECCEEEEEEe
Q 027026 174 EEEEWPSNGYGSYSTRIALPDNVEFEKIQAEVKDGVLYITIP 215 (229)
Q Consensus 174 ~~~~~~er~~g~f~r~i~LP~~vd~~~IkA~~~nGvL~ItiP 215 (229)
..|.|..+. ....-.|.||.++..+.++..++..-|.|.+.
T Consensus 14 ~~y~W~Qt~-~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k 54 (157)
T 2rh0_A 14 PWGQWYQTL-EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG 54 (157)
T ss_dssp SSEEEEECS-SEEEEEEECCTTCCGGGEEEEECSSEEEEEET
T ss_pred CcEEEEecC-CEEEEEEECCCCCcccceEEEEecCEEEEEEC
Confidence 356676533 45566799999999999999999999999873
No 60
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=20.69 E-value=1.6e+02 Score=25.48 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=30.1
Q ss_pred CCCceEEEEECCEEEEEEEEeccccc-CCCCCCCCCceee---------eeeeeeeEEEEEECCCC
Q 027026 140 SRNDVKVRVEESMLVIKAEKAQRNEA-NTDGSTVEEEEEW---------PSNGYGSYSTRIALPDN 195 (229)
Q Consensus 140 ~kedV~V~v~~~~L~I~g~~~~~~~~-~~~~~~~~~~~~~---------~er~~g~f~r~i~LP~~ 195 (229)
+++++.| +++.|+|++.+...... .+. ....+.. ....||.|+-++.||..
T Consensus 85 ~~~Nv~v--~dG~L~I~a~~~~~~~~~~G~---~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSV--KKGCLRIINTVLSPTEGLDGK---PGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEE--ETTEEEEECEEEEEEECGGGC---BSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEE--ECCEEEEEEEeCCCCcccCCc---ccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 5666555 59999999987642110 000 0001111 02568999999999975
No 61
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=20.29 E-value=1.8e+02 Score=20.91 Aligned_cols=27 Identities=7% Similarity=0.147 Sum_probs=17.6
Q ss_pred CceEEEEECCEEEEEEeccCCCCCceE
Q 027026 199 EKIQAEVKDGVLYITIPKASSTAKIVD 225 (229)
Q Consensus 199 ~~IkA~~~nGvL~ItiPK~~~~~k~i~ 225 (229)
+.+++...--.+.|++-|.....-++.
T Consensus 80 ~~v~v~v~P~~V~V~i~~~~~k~~pV~ 106 (119)
T 2kq1_A 80 GDLAVTVEPRMARVQLEERQTVSVPVT 106 (119)
T ss_dssp TTSEEEESCCEEEEEEESCCCCCCCCC
T ss_pred CCeEEEEcCCEEEEEEEEEEEEEEEEE
Confidence 345566778889999988765433333
No 62
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=20.12 E-value=2.3e+02 Score=20.49 Aligned_cols=39 Identities=10% Similarity=0.381 Sum_probs=31.1
Q ss_pred ceeeeeeeeeeEEEEEECCCCc-ccCceEEEEECCEEEEEE
Q 027026 175 EEEWPSNGYGSYSTRIALPDNV-EFEKIQAEVKDGVLYITI 214 (229)
Q Consensus 175 ~~~~~er~~g~f~r~i~LP~~v-d~~~IkA~~~nGvL~Iti 214 (229)
.+.|..+. ....-.|.||.++ +.+.++..++..-|.|.+
T Consensus 21 ~y~W~Qt~-~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~ 60 (124)
T 1wgv_A 21 NYTWSQDY-TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 60 (124)
T ss_dssp SCEEEEET-TEEEEEEECCTTCCSGGGEEEEECSSEEEEEE
T ss_pred cEEEEEcc-cEEEEEEEcCCCCCchhheEEEEEcCEEEEEE
Confidence 56676533 4556679999888 899999999999999987
Done!