BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027033
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S1Z1|UTP11_ORYSJ Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza
sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2
Length = 229
Score = 337 bits (863), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 163/229 (71%), Positives = 201/229 (87%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
MSSLRNA+ RRAHKERAQP+SRKKFGLLEKHKDY++RAKA+H+KEE+IR+LKEKA+FRNP
Sbjct: 1 MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60
Query: 61 DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
DEFYFKMI +KTVDG+HR + EANKYT++ELML+KT+D+GY+LQ +QSE+ KIEKL++ML
Sbjct: 61 DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120
Query: 121 HSLDNNPSSRHVYFAEDREEAKEIKSQSGRKDALPDFDDIPDHIKRKTAASYRELEGRKK 180
H LDN ++HVYFAEDREE KEI+S+ +K + D+IP IKRKTA+SYRELE RK+
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180
Query: 181 RVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCPTSKAVYKWRSERKR 229
RVQ+LEKLY DM+L KEL+K GRKRKLRE+EI TS+ VYKWR++RKR
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229
>sp|Q9M223|UTP11_ARATH Probable U3 small nucleolar RNA-associated protein 11
OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1
Length = 228
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 187/229 (81%), Gaps = 1/229 (0%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
MSSLRNA+PR AHKER+QP++RK+FG+LEKHKDY+IRA AYHKK+E+++ L++KAAF+NP
Sbjct: 1 MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60
Query: 61 DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
DEF FKMI +KTVDG HR + E NKY+ EELM+MKTQDIGYV QK QSE+NKI+KLT L
Sbjct: 61 DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120
Query: 121 HSLDNNPSSRHVYFAEDREEAKEIKSQSGRKDALPDFDDIPDHIKRKTAASYRELEGRKK 180
+ S RHVY+AEDREEA+E++ Q GR + +IP IK+K SYR+LEGRK
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQ-GRSKSDISTVEIPKDIKKKMDRSYRDLEGRKS 179
Query: 181 RVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCPTSKAVYKWRSERKR 229
R ++LEKLY DMS+ KELQKKGRKRKLR++E++ P KAVYKWR++RKR
Sbjct: 180 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228
>sp|Q55C50|UTP11_DICDI Probable U3 small nucleolar RNA-associated protein 11
OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1
Length = 250
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 141/248 (56%), Gaps = 40/248 (16%)
Query: 1 MSS--LRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFR 58
MSS LR LP+RA +ER QP+S KK G LE+ KDYV RAK Y+ K +++++LK +AAF+
Sbjct: 1 MSSMNLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFK 60
Query: 59 NPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTT 118
NPDEF +KMI +K VDGVH E +E+++ +KTQDI Y+ K +++ KIE+L
Sbjct: 61 NPDEFNYKMISSKLVDGVHS-EISKTSLKKEQIIDIKTQDILYLQSKRRADDKKIERLQA 119
Query: 119 MLHSLDNN--PSSRHVYFAEDREEAKEIKSQSGRK--DALPD-----FDDIPDHIKRK-- 167
L +D+ P+ + +Y ++ KE+K+ S K D +PD IP K K
Sbjct: 120 TLQYMDSGLEPTEQIIYV----DDEKEVKNFSATKYFDTVPDAFNGSLSTIPKISKLKEG 175
Query: 168 ------------------TAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRK----R 205
TA SY+EL+ RK R +L K MD+S K K+G K +
Sbjct: 176 SLVVNPKTAPTLGQLEAMTATSYKELKERKLRRDQLFKAEMDLSKSKIQLKRGTKSGVTK 235
Query: 206 KLREEEIV 213
K+ ++E+V
Sbjct: 236 KVGKKEVV 243
>sp|Q10106|UTP11_SCHPO Probable U3 small nucleolar RNA-associated protein 11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC18G6.06 PE=3 SV=1
Length = 249
Score = 124 bits (310), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 134/253 (52%), Gaps = 31/253 (12%)
Query: 2 SSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPD 61
SS +NA R+ H+ERAQP R+K+GLLEK KDY RA+ Y K++ ++RL+EKA RNPD
Sbjct: 3 SSFKNAGQRKNHRERAQPFERRKWGLLEKRKDYAQRAQDYKTKQKKLKRLREKALERNPD 62
Query: 62 EFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLH 121
EFY +M KT +GV + E + + + ++KTQDIG++ ER KI+ L +H
Sbjct: 63 EFYHEMTHKKTKNGVPLEQREDSTIDMDTIKILKTQDIGWIRHHRNVERAKIDHLEQQMH 122
Query: 122 SL----DNNPSSRHVYFAEDREEAKEIKSQS---------GRKDALPDFDDIPD------ 162
++ + N S +H F ++ +EAK GR + D I +
Sbjct: 123 TVGAHRNKNESRKHTIFVDNVKEAKSFNPAEFFQTTDDLVGRTENRVKKDQIENNELTNQ 182
Query: 163 ------HIKRKTAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCPT 216
H K K A+ EL R+KR ++L + L + LQ KG ++K +
Sbjct: 183 PFSGKLHSKLKEKAAT-ELLLRQKRDKKLAAAEERVELDRLLQGKGGRQKKK-----VVN 236
Query: 217 SKAVYKWRSERKR 229
K VYKWR+ERKR
Sbjct: 237 GKPVYKWRNERKR 249
>sp|Q9CZJ1|UTP11_MOUSE Probable U3 small nucleolar RNA-associated protein 11 OS=Mus
musculus GN=Utp11l PE=2 SV=1
Length = 253
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 29/244 (11%)
Query: 11 RAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKT 70
R H+ER+QP RK+ GLLEK KDY +RA YHKK++ +R L++KA +NPDEFY+KM +
Sbjct: 14 REHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTRA 73
Query: 71 KTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNPS 128
K DGVH + + T E+L LM+TQDI Y+ K +E KIE+L + LH LD
Sbjct: 74 KLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQQ 133
Query: 129 SRHVYFAEDREEAKEIKSQSGRKDALPDFDD-------------------IPD----HIK 165
+HV+F + ++E + + + A P+ D P I
Sbjct: 134 KKHVFFFDTKKEVERFDVATHLQTA-PELVDRVYNRPRIETLQKERVKGATPQTGLKRIA 192
Query: 166 RKTAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCPTSKAVYKWRS 225
++ Y L R +R ++L + + K+L K +K K+++E + P A+Y++++
Sbjct: 193 KERQKQYDCLTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSP---AIYRFQT 249
Query: 226 ERKR 229
RKR
Sbjct: 250 RRKR 253
>sp|Q9Y3A2|UTP11_HUMAN Probable U3 small nucleolar RNA-associated protein 11 OS=Homo
sapiens GN=UTP11L PE=1 SV=2
Length = 253
Score = 120 bits (301), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 132/243 (54%), Gaps = 27/243 (11%)
Query: 11 RAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKT 70
R H+ER+QP RK GLLEK KDY +RA Y KK+E ++ L++KA +NPDEFY+KM +
Sbjct: 14 REHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTRV 73
Query: 71 KTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNPS 128
K DGVH ++ + T E+L LM+TQD+ Y+ K +E KIE+L + LH LD
Sbjct: 74 KLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQQ 133
Query: 129 SRHVYFAEDREEAKEIKSQSGRKDALPDFDDIPD----------------------HIKR 166
++HV+F + ++E ++ + + A D + + I +
Sbjct: 134 NKHVFFFDTKKEVEQFDVATHLQTAPELVDRVFNRPRIETLQKEKVKGVTNQTGLKRIAK 193
Query: 167 KTAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCPTSKAVYKWRSE 226
+ Y L R +R ++L + + K+L K +K K+++E + P A+YK++S
Sbjct: 194 ERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP---AIYKFQSR 250
Query: 227 RKR 229
RKR
Sbjct: 251 RKR 253
>sp|Q8R5K5|UTP11_RAT Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus
norvegicus GN=Utp11l PE=2 SV=1
Length = 253
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 29/254 (11%)
Query: 2 SSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRN 59
++ R A+ +R ++ER+QP RK GLLEK KDY +RA Y KK+E ++ L++KA +N
Sbjct: 3 AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62
Query: 60 PDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTM 119
PDEFY+KM + K DGVH ++ + T E+L LM+TQD+ Y+ K +E KIE+L +
Sbjct: 63 PDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSE 122
Query: 120 LHSLD--NNPSSRHVYFAEDREEAKEIKSQSGRKDALPDFDDIPD--------------- 162
LH LD +RHV+F + ++E ++ + + A D + +
Sbjct: 123 LHLLDFQGKQQNRHVFFFDTKKEVEQFDVAAHLQTAPELVDRVFNRPRIETLQKEKVKGV 182
Query: 163 -------HIKRKTAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREEEIVCP 215
I ++ Y L R +R ++L + + K+L K +K K+++E + P
Sbjct: 183 TNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP 242
Query: 216 TSKAVYKWRSERKR 229
A+YK++S RKR
Sbjct: 243 ---AIYKFQSRRKR 253
>sp|Q9W3C0|UTP11_DROME Probable U3 small nucleolar RNA-associated protein 11 OS=Drosophila
melanogaster GN=CG1789 PE=2 SV=1
Length = 237
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
Query: 1 MSSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFR 58
MSS +NA ++ H+ER QP+SR+ G LEK KDY RA KK+++++ L +A +
Sbjct: 1 MSSWKNASKSNQKVHRERHQPESRQHLGFLEKKKDYKKRAIDAQKKQKTLKLLYRRAQNK 60
Query: 59 NPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTT 118
NPDEFY MI +K + H + +++T E+L LM+TQD+ YV+ K ER KIE+L
Sbjct: 61 NPDEFYHHMINSKLSNDEHHEKDTKDEHTPEQLALMQTQDLKYVVMKRTMERKKIERLKA 120
Query: 119 MLHSLD--NNPSSRHVYFAED 137
L +D +++ + F ED
Sbjct: 121 SLVDVDAIKGAANKRIKFDED 141
>sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein 11 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP11 PE=1
SV=2
Length = 250
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 39/259 (15%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
M+ L + + ++ H+ER+Q SR ++G LEKHKDYV RA+ +H+K+ +++ L+EKA RNP
Sbjct: 1 MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60
Query: 61 DEFYFKMIKTKT------VDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIE 114
DE+Y M KT + H E E + +++ L+KTQD YV Q E K+E
Sbjct: 61 DEYYHAMHSRKTDAKGLLISSRHGDE-EDESLSMDQVKLLKTQDSNYVRTLRQIELKKLE 119
Query: 115 KLTTMLHSLDNNPSSRHVYFAEDREEAKEIKSQS---------GRKDALPDFDDIPDHIK 165
K L S H F + RE+ E + R + D + I
Sbjct: 120 KGAKQLMF---KSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLTKDQLAQDIS 176
Query: 166 RKTAAS---------------YRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREE 210
AS +++++ +R +L+++ M +EL KKG K+K
Sbjct: 177 NNRNASSIMPKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKK---- 232
Query: 211 EIVCPTSKAVYKWRSERKR 229
IV + K +KW+ +RKR
Sbjct: 233 -IVDSSGKISFKWKKQRKR 250
>sp|A6ZZL7|UTP11_YEAS7 U3 small nucleolar RNA-associated protein 11 OS=Saccharomyces
cerevisiae (strain YJM789) GN=UTP11 PE=3 SV=1
Length = 250
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 39/259 (15%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
M+ L + + ++ H+ER+Q SR ++G LEKHKDYV RA+ +H+K+ +++ L+EKA RNP
Sbjct: 1 MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60
Query: 61 DEFYFKMIKTKT------VDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIE 114
DE+Y M KT + H E E + +++ L+KTQD YV Q E K+E
Sbjct: 61 DEYYHAMHSRKTDAKGLLISSRHGDE-EDESLSMDQVKLLKTQDSNYVRTLRQIELKKLE 119
Query: 115 KLTTMLHSLDNNPSSRHVYFAEDREEAKEIKSQS---------GRKDALPDFDDIPDHIK 165
K L S H F + RE+ E + R + D + I
Sbjct: 120 KGAKQLMF---KSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLTKDQLAQDIS 176
Query: 166 RKTAAS---------------YRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREE 210
AS +++++ +R +L+++ M +EL KKG K+K
Sbjct: 177 NNRNASSIMPKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKK---- 232
Query: 211 EIVCPTSKAVYKWRSERKR 229
IV + K +KW+ +RKR
Sbjct: 233 -IVDSSGKISFKWKKQRKR 250
>sp|B5VM59|UTP11_YEAS6 U3 small nucleolar RNA-associated protein 11 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=UTP11 PE=3 SV=1
Length = 250
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 39/259 (15%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
M+ L + + ++ H+ER+Q SR ++G LEKHKDYV RA+ +H+K+ +++ L+EKA RNP
Sbjct: 1 MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60
Query: 61 DEFYFKMIKTKT------VDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIE 114
DE+Y M KT + H E E + +++ L+KTQD YV Q E K+E
Sbjct: 61 DEYYHAMHSRKTDAKGLLISSRHGDE-EDESLSMDQVKLLKTQDSNYVRTLRQIELKKLE 119
Query: 115 KLTTMLHSLDNNPSSRHVYFAEDREEAKEIKSQS---------GRKDALPDFDDIPDHIK 165
K L S H F + RE+ E + R + D + I
Sbjct: 120 KGAKQLMF---KSSGNHTIFVDSREKMNEFTPEKFFNTTSEMVNRSENRLTKDQLAQDIS 176
Query: 166 RKTAAS---------------YRELEGRKKRVQELEKLYMDMSLHKELQKKGRKRKLREE 210
AS +++++ +R +L+++ M +EL KKG K+K
Sbjct: 177 NNRNASSIMPKESLDKKKLKKFKQVKQHLQRETQLKQVQQRMDAQRELLKKGSKKK---- 232
Query: 211 EIVCPTSKAVYKWRSERKR 229
IV + K +KW+ +RKR
Sbjct: 233 -IVDSSGKISFKWKKQRKR 250
>sp|Q09462|UTP11_CAEEL Probable U3 small nucleolar RNA-associated protein 11
OS=Caenorhabditis elegans GN=C16C10.2 PE=3 SV=1
Length = 262
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 43/267 (16%)
Query: 1 MSSL----RNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAA 56
MSSL + +R H+ER+QP++R+K+G LEK KDY +RA+ Y KK ++I++LK+ A
Sbjct: 1 MSSLVSISKKLSGQRQHRERSQPEARRKYGELEKKKDYKLRAEDYQKKRDTIKKLKKSAM 60
Query: 57 FRNPDEFYFKMIKTKT-VDGVH---RLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNK 112
+N DE++ M+ ++T DG H + E E + TQ + L +D+ YV KL E+ K
Sbjct: 61 DKNQDEYHHHMVNSETWADGRHFDKKTEAEETE-TQIQKKLGSLKDLEYVKFKLNEEKKK 119
Query: 113 IEKLTTMLHSLD---NNPSSRHVYFAEDREEAKEIK------------SQSGRKDALPDF 157
I+++ LH D N + H F + EAK S+ + DF
Sbjct: 120 IDEMKGELHFADSSLNGKGNTHTVFVDTDSEAKSFDPRVYFDTTTSMLSRQFNRLKNEDF 179
Query: 158 DD-------------IPDHIKRKTAASYRELEGRKKRVQELEKLYMDMSLHKELQKKGRK 204
+ D ++R Y EL R +R +EL+ + + L K+L G K
Sbjct: 180 QNKTIIGAGTKEQVRKADRVRR---TRYNELIKRVERAKELQVVVDKLELKKQLA-AGSK 235
Query: 205 RKLREEEI--VCPTSKAVYKWRSERKR 229
+L+ +++ AVYKW ERK+
Sbjct: 236 SELKPQKVKKAKAMRAAVYKWTYERKK 262
>sp|Q9U178|UTP11_LEIMA Probable U3 small nucleolar RNA-associated protein 11 OS=Leishmania
major GN=L374.02 PE=3 SV=1
Length = 361
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 37/227 (16%)
Query: 2 SSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKE---KAAFR 58
S L L R+ H ER+QP+SR+ G LEKHKD+V+RAK K++ +RRL+E AA R
Sbjct: 12 SGLDKHLKRKTHLERSQPKSRQHLGQLEKHKDHVLRAK---KRKVKVRRLQEIKRAAAQR 68
Query: 59 NPDEFYFKMIKT--KTVDG------VHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSER 110
NPDEF M K +G V +E + K Q + + +++ Y+ K Q+++
Sbjct: 69 NPDEFNIGMTKAVMDVANGRMRQRRVRLVESDRKKDMQTTIEHNR-RNVQYLEFKAQADQ 127
Query: 111 NKIEKLTT--MLHSLDNN-PSSRHVYFAEDREEAKEIKSQSGRKDALPDFDDIPDHIKRK 167
+ +L +L + P ++H+ F EE + + L FD P+ +++
Sbjct: 128 QRATELLNEEAAAALTSTAPQNKHIVFVNSEEEFRSF-------NPLKHFDVTPEMMRQH 180
Query: 168 TAASYRELEGRKKRVQELEKLYMD----MSLHKELQKKGRKRKLREE 210
A + R++ LEK M MS +++ +KRK R E
Sbjct: 181 PAV--------RGRIRVLEKTVMPEEILMSGGHQIKSAAQKRKERRE 219
>sp|Q8I4V5|UTP11_PLAF7 Probable U3 small nucleolar RNA-associated protein 11 OS=Plasmodium
falciparum (isolate 3D7) GN=PFL2295w PE=3 SV=1
Length = 212
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
Query: 1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
MS+ +N +P+R + ER Q + R G LEK DY R + Y KK++ LKEK +NP
Sbjct: 1 MSNFKNIIPKRTYLERGQAKHRLHLGELEKKVDYGKRREIYKKKKKIENVLKEKIMTKNP 60
Query: 61 DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSER----NKIEKL 116
DEF+ M+ ++ E N +EE +L K + Q+L+ + NK++K+
Sbjct: 61 DEFHTGMVHSRVT--------EDNVLVREEKVLKKEVQLKNKRQELKEQTNDLYNKLKKI 112
Query: 117 TTMLHSLDNNPSSRHVY 133
L + N R+V+
Sbjct: 113 NKRLSNYQMNIPLRYVF 129
>sp|Q9VWR5|CP306_DROME Cytochrome P450 306a1 OS=Drosophila melanogaster GN=phm PE=1 SV=1
Length = 574
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 28/198 (14%)
Query: 25 FGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK--TKTVDGVHRL-EG 81
FG++ +D + R H + E+I LK R P E ++ + + VD RL +
Sbjct: 127 FGIICAQED-IWR----HARRETIDWLKALGMTRRPGELRARLERRIARGVDECVRLFDT 181
Query: 82 EANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDREEA 141
EA K E+ + S N I L + ++P +Y +EE
Sbjct: 182 EAKKSCASEVNPLPALH--------HSLGNIINDLVFGITYKRDDPD--WLYLQRLQEEG 231
Query: 142 KEIKSQSGRKDALPDFDDIPDHI---------KRKTAASY-RELEGRKKRVQELEKLYMD 191
++ SG + LP +P ++ K KT A Y R +E +R++E +K++ +
Sbjct: 232 VKLIGVSGVVNFLPWLRHLPANVRNIRFLLEGKAKTHAIYDRIVEACGQRLKEKQKVFKE 291
Query: 192 MSLHKELQKKGRKRKLRE 209
+ K LQ++ K +LR+
Sbjct: 292 LQEQKRLQRQLEKEQLRQ 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,496,624
Number of Sequences: 539616
Number of extensions: 3423092
Number of successful extensions: 16641
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 16032
Number of HSP's gapped (non-prelim): 826
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 59 (27.3 bits)