Query 027035
Match_columns 229
No_of_seqs 144 out of 1419
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 06:02:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027035.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027035hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.6E-49 8.8E-54 324.0 22.3 169 22-201 14-186 (197)
2 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.8E-49 6E-54 327.0 18.9 169 27-199 5-182 (201)
3 2ok3_A Peptidyl-prolyl CIS-tra 100.0 3.6E-49 1.2E-53 314.9 18.8 157 29-195 1-161 (161)
4 2poe_A Cyclophilin-like protei 100.0 5.3E-49 1.8E-53 320.0 19.4 163 26-197 14-182 (185)
5 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5.7E-48 1.9E-52 309.1 19.1 157 23-189 6-165 (166)
6 2b71_A Cyclophilin-like protei 100.0 1.2E-47 4.2E-52 314.0 19.2 156 27-192 37-195 (196)
7 2a2n_A Peptidylprolyl isomeras 100.0 1.7E-47 5.7E-52 308.9 19.3 162 17-188 10-175 (176)
8 2fu0_A Cyclophilin, putative; 100.0 1.7E-47 5.7E-52 304.7 18.1 152 28-189 5-159 (160)
9 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.1E-47 3.9E-52 312.9 16.9 164 26-197 13-187 (188)
10 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2.9E-47 9.8E-52 313.0 18.9 162 23-194 6-170 (203)
11 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.1E-47 1.1E-51 310.6 18.8 157 20-189 15-191 (191)
12 1v9t_A Cyclophilin B; beta bar 100.0 2E-47 7E-52 306.2 16.5 158 26-190 2-166 (166)
13 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2.2E-47 7.5E-52 306.5 16.0 155 28-189 3-167 (167)
14 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.7E-46 5.8E-51 302.1 19.7 156 26-190 8-172 (172)
15 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.2E-46 7.5E-51 301.8 20.2 157 24-189 7-172 (173)
16 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.2E-46 4.2E-51 304.3 18.6 155 27-189 9-177 (177)
17 1lop_A Cyclophilin A; rotamase 100.0 2E-47 6.9E-52 305.7 13.8 154 30-190 1-164 (164)
18 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.3E-46 7.9E-51 303.2 19.9 158 24-189 5-179 (179)
19 2hq6_A Serologically defined c 100.0 2.4E-46 8.3E-51 304.1 19.2 158 27-195 23-185 (185)
20 2igv_A Peptidyl-prolyl CIS-tra 100.0 3E-46 1E-50 301.1 19.5 155 27-190 2-172 (173)
21 2z6w_A Peptidyl-prolyl CIS-tra 100.0 5.3E-46 1.8E-50 297.6 19.6 153 28-189 3-164 (165)
22 1qng_A Peptidyl-prolyl CIS-tra 100.0 4E-46 1.4E-50 299.6 18.8 154 27-189 2-170 (170)
23 3bkp_A Cyclophilin; malaria, i 100.0 7.1E-47 2.4E-51 316.9 14.8 161 27-197 20-200 (232)
24 1a58_A Cyclophilin; isomerase, 100.0 5E-46 1.7E-50 300.8 19.2 155 27-189 5-176 (177)
25 2haq_A Cyclophilin; rotamase, 100.0 4.3E-46 1.5E-50 299.4 18.6 156 26-189 9-172 (172)
26 3rdd_A Peptidyl-prolyl CIS-tra 100.0 5.3E-46 1.8E-50 302.2 19.3 156 26-190 20-184 (184)
27 3pmp_A Cyclophilin A; peptidyl 100.0 8.4E-46 2.9E-50 296.3 19.6 153 28-189 2-163 (164)
28 4fru_A Cyclophilin B, peptidyl 100.0 3E-46 1E-50 304.3 16.4 157 26-190 10-175 (185)
29 2he9_A NK-tumor recognition pr 100.0 1.2E-45 4E-50 301.8 19.9 158 25-190 16-190 (192)
30 3k2c_A Peptidyl-prolyl CIS-tra 100.0 6.4E-45 2.2E-49 297.8 20.2 158 24-190 23-191 (193)
31 2poy_A Peptidyl-prolyl CIS-tra 100.0 3.8E-45 1.3E-49 297.3 18.4 155 25-188 16-186 (186)
32 1z81_A Cyclophilin; structural 100.0 5.1E-45 1.8E-49 304.5 17.7 157 25-189 56-229 (229)
33 2ose_A Probable peptidyl-proly 100.0 3.9E-45 1.3E-49 306.9 14.8 168 23-197 9-214 (234)
34 2c3b_A Ppiase, cyclophilin; is 100.0 3.3E-44 1.1E-48 288.8 12.1 149 34-189 18-172 (172)
35 1ihg_A Cyclophilin 40; ppiase 100.0 6.4E-42 2.2E-46 305.6 19.8 155 28-191 15-186 (370)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 2.4E-36 8.1E-41 266.9 8.9 139 26-165 168-344 (369)
37 3kop_A Uncharacterized protein 95.4 0.23 7.8E-06 39.2 11.1 114 30-165 23-167 (188)
38 2nnz_A Hypothetical protein; b 95.4 0.052 1.8E-06 42.0 7.3 104 27-163 28-142 (153)
39 1zx8_A Hypothetical protein TM 87.5 3.7 0.00013 30.8 8.5 101 28-163 12-123 (136)
40 2a3m_A COG3005: nitrate/TMAO r 31.5 18 0.00062 26.5 1.4 13 31-43 31-43 (130)
41 4dz1_A DALS D-alanine transpor 31.2 25 0.00084 27.7 2.3 13 38-50 29-41 (259)
42 4ank_A Transthyretin; hormone 23.9 32 0.0011 25.9 1.7 16 31-46 35-54 (147)
43 2khf_A PLNJ; anti-microbial, b 23.5 16 0.00056 18.5 -0.1 15 54-68 4-18 (26)
No 1
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-49 Score=324.00 Aligned_cols=169 Identities=29% Similarity=0.436 Sum_probs=150.2
Q ss_pred CCCCCCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCcccccccc
Q 027035 22 EDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEA 100 (229)
Q Consensus 22 ~~p~~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~ 100 (229)
..| ....+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...
T Consensus 14 ~~~-~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~------si~ 86 (197)
T 1zkc_A 14 LVP-RGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGE------SYW 86 (197)
T ss_dssp CCC-CSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCC------BTT
T ss_pred CCC-CCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCC------ccC
Confidence 344 3457999999999999999999999999999999999999999999999999999999875 22221 114
Q ss_pred CccccCC-cCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCCCCC
Q 027035 101 EKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE-GIFVMP 177 (229)
Q Consensus 101 ~~~~~~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~-~~~~~P 177 (229)
|..+++| .+.++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|++|||||++|++++++.+ + +|
T Consensus 87 g~~f~dE~~~~l~h~~~G~lsMAn-~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~---~P 162 (197)
T 1zkc_A 87 GKPFKDEFRPNLSHTGRGILSMAN-SGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTD---RP 162 (197)
T ss_dssp BSCBCCCCCTTCCSCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTC---CB
T ss_pred CCccccccCcCcCCCCceEEEEec-CCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCC---Cc
Confidence 6778888 578999 899999999 689999999999999999999999999999999999999999999886 6 99
Q ss_pred CcceEEEEeeeecCCcchhHHHHH
Q 027035 178 TERITIHSSYYYDTEMEICEKERS 201 (229)
Q Consensus 178 ~~~i~I~~~~vl~~~~~~~~~~~~ 201 (229)
.++|+|.+|+++.+||++++.+..
T Consensus 163 ~~~i~I~~~~v~~dPf~d~~~~~~ 186 (197)
T 1zkc_A 163 KEEIRIDATTVFVDPYEEADAQIA 186 (197)
T ss_dssp SSCCEEEEEEEEECTTHHHHHHHH
T ss_pred CCCeEEEEEEEEcCCcccHHHHHH
Confidence 999999999999999988775333
No 2
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-49 Score=327.00 Aligned_cols=169 Identities=21% Similarity=0.331 Sum_probs=142.7
Q ss_pred CCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEee-----cCCC-CCCCC-Cccccccc
Q 027035 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVA-----DVVG-GRSAP-MNEVQRVE 99 (229)
Q Consensus 27 ~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~G-----d~~~-~~~~~-~~~~~~~~ 99 (229)
.+.+|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+++|++||| |+.+ |.+.+ ........
T Consensus 5 ~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~ 84 (201)
T 3bo7_A 5 KKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSISGFP 84 (201)
T ss_dssp CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCCSST
T ss_pred CceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCcccccccccc
Confidence 45799999999999999999999999999999999999999999999999999999 8874 22221 11111112
Q ss_pred cCccccCC-cCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCC
Q 027035 100 AEKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177 (229)
Q Consensus 100 ~~~~~~~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P 177 (229)
.+..+++| .+.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++.++ +|
T Consensus 85 ~g~~f~dE~~~~l~h~~~G~lsmA~-~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P 160 (201)
T 3bo7_A 85 GGAPFEDEFDNRLVHQGIGVLSMAN-DGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKD---KP 160 (201)
T ss_dssp TCCCBCCCCCTTCCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTS---CB
T ss_pred CCCcccCcccCCCCcCCCcEEEEee-CCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCC---Cc
Confidence 36788888 578999 899999999 6899999999999999999999999999999999999999999999877 99
Q ss_pred CcceEEEEeeeecCCcchhHHH
Q 027035 178 TERITIHSSYYYDTEMEICEKE 199 (229)
Q Consensus 178 ~~~i~I~~~~vl~~~~~~~~~~ 199 (229)
.++|+|.+|+++.+||++++..
T Consensus 161 ~~~i~I~~~~v~~dPf~d~~~~ 182 (201)
T 3bo7_A 161 LKPPKVEEIIVFKNPFEDARKE 182 (201)
T ss_dssp SSCCBEEEEEEEECCC------
T ss_pred CCCeEEEEEEEEcCCccCHHHH
Confidence 9999999999999999988753
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=3.6e-49 Score=314.87 Aligned_cols=157 Identities=35% Similarity=0.547 Sum_probs=142.1
Q ss_pred cEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccCccccCC
Q 027035 29 ARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVGE 107 (229)
Q Consensus 29 ~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~~~~~~e 107 (229)
+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...+..+++|
T Consensus 1 m~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~dE 74 (161)
T 2ok3_A 1 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGN------SIWGKKFEDE 74 (161)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC------CTTSSCBCCC
T ss_pred CEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCC------cccCCccccc
Confidence 4799999999999999999999999999999999999999999999999999999884 22211 1136678888
Q ss_pred c-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC-CCCCCCCcceEEE
Q 027035 108 F-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE-GIFVMPTERITIH 184 (229)
Q Consensus 108 ~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~-~~~~~P~~~i~I~ 184 (229)
. +.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++.+ + +|.++|+|.
T Consensus 75 ~~~~l~h~~~G~lsma~-~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~---~P~~~v~I~ 150 (161)
T 2ok3_A 75 YSEYLKHNVRGVVSMAN-NGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTY---RPLNDVHIK 150 (161)
T ss_dssp CCTTCCSCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTC---CBSSCCBEE
T ss_pred cCcCcCcCCCeEEEEec-CCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCC---CcCCCeEEE
Confidence 4 68998 899999999 679999999999999999999999999999999999999999999886 6 999999999
Q ss_pred EeeeecCCcch
Q 027035 185 SSYYYDTEMEI 195 (229)
Q Consensus 185 ~~~vl~~~~~~ 195 (229)
+|.++++||++
T Consensus 151 ~~~i~~~Pf~d 161 (161)
T 2ok3_A 151 DITIHANPFAQ 161 (161)
T ss_dssp EEEEECCSCC-
T ss_pred EEEEecCCCCC
Confidence 99999999974
No 4
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=5.3e-49 Score=319.98 Aligned_cols=163 Identities=33% Similarity=0.507 Sum_probs=142.9
Q ss_pred CCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccCccc
Q 027035 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTV 104 (229)
Q Consensus 26 ~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~~~~ 104 (229)
...+.|.|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..+
T Consensus 14 ~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~------si~g~~~ 87 (185)
T 2poe_A 14 LYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGE------SIYGRYF 87 (185)
T ss_dssp -CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCC------BTTBSCB
T ss_pred CCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCC------ccCCCcc
Confidence 3467999999999999999999999999999999999999999999999999999999884 22221 1246778
Q ss_pred cCCc-CCCCC-CccEEEEecCCC---CCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCc
Q 027035 105 VGEF-SDVKH-VRGILSMGRYSD---PNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179 (229)
Q Consensus 105 ~~e~-~~l~h-~~G~lsma~~~~---~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~ 179 (229)
++|+ +.++| .+|+||||+.+. |++++|||||++++++|||++|+|||+|++|||||++|++++++.++ +|.+
T Consensus 88 ~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P~~ 164 (185)
T 2poe_A 88 DDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSH---KPID 164 (185)
T ss_dssp CCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTS---CBSS
T ss_pred cccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCC---CcCC
Confidence 8885 78999 899999999543 99999999999999999999999999999999999999999998877 9999
Q ss_pred ceEEEEeeeecCCcchhH
Q 027035 180 RITIHSSYYYDTEMEICE 197 (229)
Q Consensus 180 ~i~I~~~~vl~~~~~~~~ 197 (229)
+|+|.+|+++.+||++++
T Consensus 165 ~v~I~~~~i~~dPf~d~~ 182 (185)
T 2poe_A 165 EIIIKDIVIHSNPIADQE 182 (185)
T ss_dssp CCEEEEEEEECCC-----
T ss_pred CeEEEEEEEECCCCCCcc
Confidence 999999999999998875
No 5
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5.7e-48 Score=309.14 Aligned_cols=157 Identities=29% Similarity=0.464 Sum_probs=142.0
Q ss_pred CCCCCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccC
Q 027035 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAE 101 (229)
Q Consensus 23 ~p~~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~ 101 (229)
.+...+++|.|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...+
T Consensus 6 ~~~~~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g 79 (166)
T 2x7k_A 6 PDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGA------SIYG 79 (166)
T ss_dssp CTTCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCC------CTTS
T ss_pred ccccCCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCC------ccCC
Confidence 3556778999999999999999999999999999999999999999999999999999999875 22221 1136
Q ss_pred ccccCCc-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCc
Q 027035 102 KTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179 (229)
Q Consensus 102 ~~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~ 179 (229)
..+++|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++.+++.++ +|.+
T Consensus 80 ~~~~dE~~~~l~h~~~G~lsmAn-~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~---~P~~ 155 (166)
T 2x7k_A 80 KQFEDELHPDLKFTGAGILAMAN-AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQD---RPVD 155 (166)
T ss_dssp SCBCCCCCTTSCCCSTTEEEECB-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTS---CBSS
T ss_pred CccccccccccCCCCCeEEEEee-CCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCC---CcCC
Confidence 7788885 68999 699999998 6799999999999999999999999999999999999999999998877 9999
Q ss_pred ceEEEEeeee
Q 027035 180 RITIHSSYYY 189 (229)
Q Consensus 180 ~i~I~~~~vl 189 (229)
+|+|.+|.++
T Consensus 156 ~i~I~~~~i~ 165 (166)
T 2x7k_A 156 DVKIIKAYPS 165 (166)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 9999999986
No 6
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-47 Score=314.02 Aligned_cols=156 Identities=29% Similarity=0.443 Sum_probs=139.1
Q ss_pred CCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccCcccc
Q 027035 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (229)
Q Consensus 27 ~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~~~~~ 105 (229)
.+++|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..++
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~------si~g~~~~ 110 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGK------SIYGEYFE 110 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCC------BTTBSCBC
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCC------ccCCCccc
Confidence 467999999999999999999999999999999999999999999999999999999985 22221 11366788
Q ss_pred CC-cCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCcceEE
Q 027035 106 GE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITI 183 (229)
Q Consensus 106 ~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~~i~I 183 (229)
+| .+.++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++||+||++|++++++.++ +|.++|+|
T Consensus 111 dE~~~~l~h~~~G~lsMAn-~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~---~P~~~i~I 186 (196)
T 2b71_A 111 DEINKELKHTGAGILSMSN-NGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATN---KPIFDLKI 186 (196)
T ss_dssp CCCCTTCCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTC---CBSSCCEE
T ss_pred ccccCCcCcCCCeEEEEcc-CCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCC---CCCCCeEE
Confidence 88 578999 899999998 7899999999999999999999999999999999999999999998877 99999999
Q ss_pred EEeeeecCC
Q 027035 184 HSSYYYDTE 192 (229)
Q Consensus 184 ~~~~vl~~~ 192 (229)
.+|+++++|
T Consensus 187 ~~~~i~~dP 195 (196)
T 2b71_A 187 LRTSTAVNA 195 (196)
T ss_dssp EEEEC----
T ss_pred EEEEEecCC
Confidence 999999875
No 7
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-47 Score=308.85 Aligned_cols=162 Identities=31% Similarity=0.482 Sum_probs=142.7
Q ss_pred ccCCCCCCCCCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccc
Q 027035 17 TASSQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEV 95 (229)
Q Consensus 17 ~~~~~~~p~~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~ 95 (229)
++++...|......|.++|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+
T Consensus 10 ~~~~~~~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~---- 85 (176)
T 2a2n_A 10 AATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGE---- 85 (176)
T ss_dssp ---CCCSCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC----
T ss_pred hcccCCCCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCC----
Confidence 3455667878888999999999999999999999999999999999999999999999999999999875 22221
Q ss_pred cccccCccccCCc-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCC-CCC
Q 027035 96 QRVEAEKTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR-KEG 172 (229)
Q Consensus 96 ~~~~~~~~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~-~~~ 172 (229)
...|..+++|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++ .++
T Consensus 86 --si~g~~~~dE~~~~l~h~~~G~lsmA~-~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 162 (176)
T 2a2n_A 86 --SIWGGEFEDEFHSTLRHDRPYTLSMAN-AGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTD 162 (176)
T ss_dssp --CTTSSCBCCCCCTTCCSCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTC
T ss_pred --cccCCccccccccccccCCceEEEEEe-CCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCC
Confidence 12466788885 47999 789999999 6799999999999999999999999999999999999999999998 455
Q ss_pred CCCCCCcceEEEEeee
Q 027035 173 IFVMPTERITIHSSYY 188 (229)
Q Consensus 173 ~~~~P~~~i~I~~~~v 188 (229)
+|.++|+|.+|.+
T Consensus 163 ---~P~~~v~I~~v~v 175 (176)
T 2a2n_A 163 ---KPYEDVSIINITV 175 (176)
T ss_dssp ---CBSSCCBEEEEEE
T ss_pred ---ccCCCeEEEEEEE
Confidence 9999999999976
No 8
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-47 Score=304.71 Aligned_cols=152 Identities=30% Similarity=0.387 Sum_probs=137.9
Q ss_pred CcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccCccccC
Q 027035 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVVG 106 (229)
Q Consensus 28 ~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~~~~~~ 106 (229)
.+.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..+++
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~d 78 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGE------SIWGNEFED 78 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCC------CTTSSCBCC
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCC------cccCCCccc
Confidence 46899999999999999999999999999999999999999999999999999999874 22221 113667888
Q ss_pred Cc-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCcceEEE
Q 027035 107 EF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIH 184 (229)
Q Consensus 107 e~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~~i~I~ 184 (229)
|+ +.++| ++|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|++++++.++ +|.++|+|.
T Consensus 79 E~~~~l~h~~~G~lsmA~-~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~---~P~~~v~I~ 154 (160)
T 2fu0_A 79 EFFDHLNHSKPFMVSMAN-CGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRD---KPLEDIKIL 154 (160)
T ss_dssp CCBTTBCSSSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---CBSSCCBEE
T ss_pred cccCCcccCCceEEEEec-CCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCC---CcCCCeEEE
Confidence 85 47999 789999999 6899999999999999999999999999999999999999999998777 999999999
Q ss_pred Eeeee
Q 027035 185 SSYYY 189 (229)
Q Consensus 185 ~~~vl 189 (229)
+|.++
T Consensus 155 ~~~v~ 159 (160)
T 2fu0_A 155 NIKIN 159 (160)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99986
No 9
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.1e-47 Score=312.85 Aligned_cols=164 Identities=28% Similarity=0.414 Sum_probs=144.3
Q ss_pred CCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccccc
Q 027035 26 LGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (229)
Q Consensus 26 ~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (229)
..+++|.|+ |+.|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|++||||+..+.+....
T Consensus 13 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 88 (188)
T 3ich_A 13 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGK---- 88 (188)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCc----
Confidence 345688887 579999999999999999999999995 688 99999999999999999996654433111
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCC
Q 027035 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (229)
Q Consensus 98 ~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~ 176 (229)
...|..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++.++ +
T Consensus 89 si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~---~ 164 (188)
T 3ich_A 89 SIYGERFPDENFKLKHYGPGWVSMAN-AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRD---K 164 (188)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---C
T ss_pred cccCCcccccccCcccCCCeEEEEcc-CCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCC---e
Confidence 1136678889888999 899999999 6799999999999999999999999999999999999999999999887 9
Q ss_pred CCcceEEEEeeee--cCCcchhH
Q 027035 177 PTERITIHSSYYY--DTEMEICE 197 (229)
Q Consensus 177 P~~~i~I~~~~vl--~~~~~~~~ 197 (229)
|.++|+|.+|+++ ++||++++
T Consensus 165 P~~~v~I~~~~~l~~~~Pf~~~~ 187 (188)
T 3ich_A 165 PLKDVIIADCGKIEVEKPFAIAK 187 (188)
T ss_dssp BSSCEEEEEEEEEEEEEEEECCC
T ss_pred ECCCEEEEEeEEEecCCCCCCCC
Confidence 9999999999998 78887764
No 10
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2.9e-47 Score=312.99 Aligned_cols=162 Identities=28% Similarity=0.439 Sum_probs=145.5
Q ss_pred CCCCCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccC
Q 027035 23 DPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAE 101 (229)
Q Consensus 23 ~p~~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~ 101 (229)
.+.+.+++|.|+|++|+|+||||++.||+||+||++||+.+||+++.||||+|+|++||||+.. +.+.+ ...+
T Consensus 6 ~~~~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~------si~g 79 (203)
T 2k7n_A 6 PDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGA------SIYG 79 (203)
T ss_dssp CCSCCCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCC------TTSC
T ss_pred ccccCCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCC------ccCC
Confidence 3455778999999999999999999999999999999999999999999999999999999875 22211 1136
Q ss_pred ccccCCc-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCc
Q 027035 102 KTVVGEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTE 179 (229)
Q Consensus 102 ~~~~~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~ 179 (229)
..+++|+ +.++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++.++ +|.+
T Consensus 80 ~~f~dE~~~~l~h~~~G~lsMAn-~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~---~P~~ 155 (203)
T 2k7n_A 80 KQFEDELHPDLKFTGAGILAMAN-AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQD---RPVD 155 (203)
T ss_dssp SCBCCCCCCSSCCCSSCEEEEEE-SSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETT---EECC
T ss_pred CcccccccccccCCCCeEEEEee-CCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCC---CcCC
Confidence 6788885 68999 699999999 6799999999999999999999999999999999999999999998877 9999
Q ss_pred ceEEEEeeeecCCcc
Q 027035 180 RITIHSSYYYDTEME 194 (229)
Q Consensus 180 ~i~I~~~~vl~~~~~ 194 (229)
+|+|.+|++++.+..
T Consensus 156 ~V~I~~~~v~~~~~s 170 (203)
T 2k7n_A 156 DVKIIKAYPSGGGGS 170 (203)
T ss_dssp CCBEEEEEECCCCCC
T ss_pred CeEEEEEEEEecCCC
Confidence 999999999987654
No 11
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.1e-47 Score=310.65 Aligned_cols=157 Identities=27% Similarity=0.459 Sum_probs=139.1
Q ss_pred CCCCCCCCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhh---------------cCCCcCCceEeEEecCCEEEeecC
Q 027035 20 SQEDPQLGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLV---------------RLGCYNTNHFFRVDKGFVAQVADV 84 (229)
Q Consensus 20 ~~~~p~~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~---------------~~g~Y~g~~f~ri~~~~~iq~Gd~ 84 (229)
+...+.+.+++|.|+|+.|+|+||||++.||+||+||++|| +.+||+|+.||||+|+|+|||||+
T Consensus 15 ~~~~~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 15 SVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp ------CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT
T ss_pred ccccCCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC
Confidence 33345567789999999999999999999999999999999 458999999999999999999998
Q ss_pred CC-CCCCCCccccccccCccccCC-cCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc--CHHH
Q 027035 85 VG-GRSAPMNEVQRVEAEKTVVGE-FSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK--GDET 159 (229)
Q Consensus 85 ~~-~~~~~~~~~~~~~~~~~~~~e-~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~--G~~v 159 (229)
.+ +.+. .|..+++| .+.++| .+|+||||+ .+|++++|||||++.++||||++|+|||+|++ ||||
T Consensus 95 ~g~G~gg---------~g~~f~dE~~~~l~h~~~G~lsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdv 164 (191)
T 1w74_A 95 TGTGRGG---------PGYKFADEFHPELQFDKPYLLAMAN-AGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRV 164 (191)
T ss_dssp TSSSSCC---------SSCCBCCCCCTTCCSCSSSEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHH
T ss_pred CCCCCCC---------CCCccccccccCCCcCCCcEEEEee-CCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHH
Confidence 64 3232 36788999 578999 799999999 67999999999999999999999999999999 9999
Q ss_pred HHHHhcCCCCCCCCCCCCCcceEEEEeeee
Q 027035 160 LRKLEGLPTRKEGIFVMPTERITIHSSYYY 189 (229)
Q Consensus 160 l~~I~~~~~~~~~~~~~P~~~i~I~~~~vl 189 (229)
|++|++++++.++ +|.++|+|.+|+|+
T Consensus 165 v~~I~~~~t~~~~---~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 165 VEAISKTATDGND---RPTDPVVIESITIS 191 (191)
T ss_dssp HHHHHTSCBCTTS---CBSSCCEEEEEEEC
T ss_pred HHHHHcCCcCCCC---CcCCCeEEEEEEEC
Confidence 9999999998877 99999999999984
No 12
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=2e-47 Score=306.24 Aligned_cols=158 Identities=31% Similarity=0.476 Sum_probs=139.7
Q ss_pred CCCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccCcccc
Q 027035 26 LGSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVV 105 (229)
Q Consensus 26 ~~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~~~~ 105 (229)
.+++.|.|+|+.|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+..+.+.. ..+..++
T Consensus 2 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~-------~~g~~~~ 74 (166)
T 1v9t_A 2 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQK-------KPNPPIK 74 (166)
T ss_dssp CCSCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCBC-------CCCCCBC
T ss_pred CCCeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCCC-------CCCCccc
Confidence 357899999999999999999999999999999999999999999999999999999998743321 1356788
Q ss_pred CC-cCCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCCC-----CcEEEEEEcCHHHHHHHhcCCCCCCCC-CCCCC
Q 027035 106 GE-FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ-----YAVFGKVTKGDETLRKLEGLPTRKEGI-FVMPT 178 (229)
Q Consensus 106 ~e-~~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~-----~~vFG~Vi~G~~vl~~I~~~~~~~~~~-~~~P~ 178 (229)
+| ...++|.+|+||||+.++|++++|||||++.+++|||++ |+|||+|++|||||++|++++++..+. .++|.
T Consensus 75 dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~ 154 (166)
T 1v9t_A 75 NEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPS 154 (166)
T ss_dssp CCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEES
T ss_pred ccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcC
Confidence 88 467888999999999667999999999999999999998 999999999999999999999986210 12899
Q ss_pred cceEEEEeeeec
Q 027035 179 ERITIHSSYYYD 190 (229)
Q Consensus 179 ~~i~I~~~~vl~ 190 (229)
++|+|.+|++++
T Consensus 155 ~~v~I~~~~v~~ 166 (166)
T 1v9t_A 155 KPVVILSATVLP 166 (166)
T ss_dssp SCCBEEEEEECC
T ss_pred CCeEEEEEEEeC
Confidence 999999999873
No 13
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2.2e-47 Score=306.49 Aligned_cols=155 Identities=28% Similarity=0.461 Sum_probs=138.5
Q ss_pred CcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccCccccCC
Q 027035 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGE 107 (229)
Q Consensus 28 ~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~e 107 (229)
++.|.|+|++|+|+||||++.||+||+||++||+.+||+|+.||||+++|++||||+..+.+.. ..+..+++|
T Consensus 3 ~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~-------~~~~~~~~E 75 (167)
T 3s6m_A 3 GSMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQK-------PTDAPIANE 75 (167)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTEEC-------CCCCCBCCC
T ss_pred CcEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCCCC-------CCCCccCCc
Confidence 5799999999999999999999999999999999999999999999999999999988643311 136678888
Q ss_pred -cCCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCCCC-CCCCC
Q 027035 108 -FSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMP 177 (229)
Q Consensus 108 -~~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~--------~~vFG~Vi~G~~vl~~I~~~~~~~~~-~~~~P 177 (229)
...++|.+|+||||+.++|++++|||||++.+++|||++ |+|||+|++|||||++|++++++..+ ..++|
T Consensus 76 ~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 155 (167)
T 3s6m_A 76 ANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVP 155 (167)
T ss_dssp GGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCB
T ss_pred ccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCc
Confidence 567889999999999778999999999999999999998 99999999999999999999998721 01299
Q ss_pred CcceEEEEeeee
Q 027035 178 TERITIHSSYYY 189 (229)
Q Consensus 178 ~~~i~I~~~~vl 189 (229)
.++|+|.+|.|+
T Consensus 156 ~~~v~I~~~~il 167 (167)
T 3s6m_A 156 NDDVVIEKAVVV 167 (167)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEC
Confidence 999999999885
No 14
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.7e-46 Score=302.05 Aligned_cols=156 Identities=28% Similarity=0.395 Sum_probs=137.8
Q ss_pred CCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhcC--CC-cCCceEeEEecCCEEEeecCCCCCCCCCccccc
Q 027035 26 LGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVRL--GC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (229)
Q Consensus 26 ~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~~--g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (229)
..+++|.|+ |+.|+|+||||++.||+||+||++||++ || |+|+.||||+|+|++||||+..+.+....
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~---- 83 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGK---- 83 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCC----
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCC----
Confidence 457899999 7899999999999999999999999984 78 99999999999999999999865433211
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCC
Q 027035 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (229)
Q Consensus 98 ~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~ 176 (229)
...+..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++. + +
T Consensus 84 si~g~~f~dE~~~l~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~-~---~ 158 (172)
T 2cmt_A 84 SIYGRKFDDENFQLRHEGFGVLSMAN-SGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKS-G---K 158 (172)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTT-C---C
T ss_pred ccCCCcccccccCcccCCceEEEEee-CCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C---C
Confidence 1135678888778999 789999999 68999999999999999999999999999999999999999999864 4 9
Q ss_pred CCcceEEEEeeeec
Q 027035 177 PTERITIHSSYYYD 190 (229)
Q Consensus 177 P~~~i~I~~~~vl~ 190 (229)
|.++|+|.+|+++.
T Consensus 159 P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 159 VKEPVIISRCGELI 172 (172)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEeEeEC
Confidence 99999999999973
No 15
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.2e-46 Score=301.79 Aligned_cols=157 Identities=27% Similarity=0.387 Sum_probs=137.0
Q ss_pred CCCCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccc
Q 027035 24 PQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95 (229)
Q Consensus 24 p~~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~ 95 (229)
....+++|.|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+....
T Consensus 7 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~-- 84 (173)
T 2r99_A 7 KARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGK-- 84 (173)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCC--
T ss_pred cccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCC--
Confidence 34557899998 679999999999999999999999995 677 99999999999999999999864443111
Q ss_pred cccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCC
Q 027035 96 QRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIF 174 (229)
Q Consensus 96 ~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~ 174 (229)
...+..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++.+++. +
T Consensus 85 --si~g~~f~dE~~~l~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-~-- 158 (173)
T 2r99_A 85 --SIYGKKFDDENFILKHTGPGLLSMAN-SGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKD-G-- 158 (173)
T ss_dssp --BTTBSCBCCCCCCSCCCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C--
T ss_pred --ccCCCcccCcccCcccCCCcEEEEcc-CCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C--
Confidence 1135678888778999 799999999 68999999999999999999999999999999999999999999865 4
Q ss_pred CCCCcceEEEEeeee
Q 027035 175 VMPTERITIHSSYYY 189 (229)
Q Consensus 175 ~~P~~~i~I~~~~vl 189 (229)
+|.++|+|.+|+++
T Consensus 159 -~P~~~v~I~~cG~l 172 (173)
T 2r99_A 159 -KPKQKVIIADCGEY 172 (173)
T ss_dssp -CCSSCEEEEEEEEC
T ss_pred -CCCCCeEEEEeeeE
Confidence 99999999999987
No 16
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.2e-46 Score=304.34 Aligned_cols=155 Identities=26% Similarity=0.422 Sum_probs=139.2
Q ss_pred CCcEEEEEE-----eCceEEEEEcCCCCchhHHHHHHhhcCCC--------cCCceEeEEecCCEEEeecCCCCCCCCCc
Q 027035 27 GSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVRLGC--------YNTNHFFRVDKGFVAQVADVVGGRSAPMN 93 (229)
Q Consensus 27 ~~~~v~~~T-----~~G~I~ieL~~d~aP~t~~nF~~l~~~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~ 93 (229)
.+++|.|++ +.|+|+||||++.||+||+||++||++++ |+|+.||||+|+|++||||+..+.+....
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~ 88 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVA 88 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCC
Confidence 478999996 58999999999999999999999999998 99999999999999999999764433211
Q ss_pred cccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCC
Q 027035 94 EVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEG 172 (229)
Q Consensus 94 ~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~ 172 (229)
...|..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|++++++.++
T Consensus 89 ----si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~ 163 (177)
T 1mzw_A 89 ----SIYRGPFADENFKLRHSAPGLLSMAN-SGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNN 163 (177)
T ss_dssp ----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred ----ccCCCcccCcccccccCCCCEEEEcc-CCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 1136678888778999 799999999 6799999999999999999999999999999999999999999998777
Q ss_pred CCCCCCcceEEEEeeee
Q 027035 173 IFVMPTERITIHSSYYY 189 (229)
Q Consensus 173 ~~~~P~~~i~I~~~~vl 189 (229)
+|.++|+|.+|+++
T Consensus 164 ---~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 164 ---KPKLPVVISQCGEM 177 (177)
T ss_dssp ---CBSSCEEEEEEEEC
T ss_pred ---CCCCCEEEEeceeC
Confidence 99999999999985
No 17
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2e-47 Score=305.72 Aligned_cols=154 Identities=32% Similarity=0.489 Sum_probs=137.1
Q ss_pred EEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccCccccCCc-
Q 027035 30 RVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEF- 108 (229)
Q Consensus 30 ~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~e~- 108 (229)
+|.|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+..+.+. +..+..+++|+
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~g~-------~~~g~~~~dE~~ 73 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQ-------KATKEPIKNEAN 73 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETTTEE-------CCCCCCBCCCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccCCCc-------CCCCCccccccc
Confidence 4899999999999999999999999999999999999999999999999999998754322 12467888884
Q ss_pred CCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCCC--------CcEEEEEEcCHHHHHHHhcCCCCCCC-CCCCCCc
Q 027035 109 SDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQ--------YAVFGKVTKGDETLRKLEGLPTRKEG-IFVMPTE 179 (229)
Q Consensus 109 ~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~--------~~vFG~Vi~G~~vl~~I~~~~~~~~~-~~~~P~~ 179 (229)
+.++|.+|+||||++.+|++++|||||++++++|||++ |+|||+|++|||||++|++++++..+ ..++|.+
T Consensus 74 ~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~ 153 (164)
T 1lop_A 74 NGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKE 153 (164)
T ss_dssp SSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESS
T ss_pred cccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCC
Confidence 67899999999998678999999999999999999998 99999999999999999999997520 0129999
Q ss_pred ceEEEEeeeec
Q 027035 180 RITIHSSYYYD 190 (229)
Q Consensus 180 ~i~I~~~~vl~ 190 (229)
+|+|.+|++++
T Consensus 154 ~v~I~~~~v~~ 164 (164)
T 1lop_A 154 DVIIESVTVSE 164 (164)
T ss_dssp CCEEEEEEECC
T ss_pred CeEEEEEEEeC
Confidence 99999999873
No 18
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.3e-46 Score=303.22 Aligned_cols=158 Identities=28% Similarity=0.367 Sum_probs=138.3
Q ss_pred CCCCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc-----------CCCcCCceEeEEecCCEEEeecCCCC
Q 027035 24 PQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR-----------LGCYNTNHFFRVDKGFVAQVADVVGG 87 (229)
Q Consensus 24 p~~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~-----------~g~Y~g~~f~ri~~~~~iq~Gd~~~~ 87 (229)
++..+++|.|+ |+.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|++||||+..+
T Consensus 5 ~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 84 (179)
T 2wfi_A 5 IKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG 84 (179)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS
T ss_pred cCCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCC
Confidence 34457889988 469999999999999999999999996 56999999999999999999999764
Q ss_pred CCCCCccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcC
Q 027035 88 RSAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGL 166 (229)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~ 166 (229)
.+.... ...+..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|+++
T Consensus 85 ~g~gg~----si~g~~f~dE~~~~~h~~~G~lsMAn-~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~ 159 (179)
T 2wfi_A 85 NGRGGE----SIYGGFFEDESFAVKHNKEFLLSMAN-RGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQ 159 (179)
T ss_dssp SSSCCC----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTC
T ss_pred CCCCCC----cccCCcccccccCcCcCCCeEEEEEe-CCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcC
Confidence 433211 1135678888778899 799999999 6899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceEEEEeeee
Q 027035 167 PTRKEGIFVMPTERITIHSSYYY 189 (229)
Q Consensus 167 ~~~~~~~~~~P~~~i~I~~~~vl 189 (229)
+++.++ +|.++|+|.+|+++
T Consensus 160 ~t~~~~---~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 160 KTDAAS---KPFAEVRILSCGEL 179 (179)
T ss_dssp CBCTTS---CBSSCEEEEEEEEC
T ss_pred CCCCCC---CCCCCeEEEeCeeC
Confidence 998877 99999999999985
No 19
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-46 Score=304.13 Aligned_cols=158 Identities=26% Similarity=0.445 Sum_probs=140.9
Q ss_pred CCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCccccccccCcccc
Q 027035 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEAEKTVV 105 (229)
Q Consensus 27 ~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~~~~~~ 105 (229)
.+++|.|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+|+|++||||+.+ +.+.+ ...|..++
T Consensus 23 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~------si~g~~~~ 96 (185)
T 2hq6_A 23 TNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGE------SIYGAPFK 96 (185)
T ss_dssp CBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCC------CTTSSCBC
T ss_pred CCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCC------cccCCccc
Confidence 467999999999999999999999999999999999999999999999999999999874 22221 11466788
Q ss_pred CCc-CCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHH--HHHHhcCCCCCCCCCCCCCcce
Q 027035 106 GEF-SDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDET--LRKLEGLPTRKEGIFVMPTERI 181 (229)
Q Consensus 106 ~e~-~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~v--l~~I~~~~~~~~~~~~~P~~~i 181 (229)
+|+ +.++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|+ |+++ +++|++++++.++ +|.++|
T Consensus 97 dE~~~~l~h~~~G~lsMA~-~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~---~P~~~v 171 (185)
T 2hq6_A 97 DEFHSRLRFNRRGLVAMAN-AGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDE---RPHNPH 171 (185)
T ss_dssp CCCBTTBCSCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTS---CBSSCC
T ss_pred cccccCcccCCCeEEEEcc-CCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCC---CCCCCe
Confidence 884 57888 899999999 6799999999999999999999999999999 8887 4789999998777 999999
Q ss_pred EEEEeeeecCCcch
Q 027035 182 TIHSSYYYDTEMEI 195 (229)
Q Consensus 182 ~I~~~~vl~~~~~~ 195 (229)
+|.+|+++++||++
T Consensus 172 ~I~~~~v~~~Pf~d 185 (185)
T 2hq6_A 172 KIKSCEVLFNPFDD 185 (185)
T ss_dssp EEEEEEEEECTTC-
T ss_pred EEEEEEEeCCCCCC
Confidence 99999999999974
No 20
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3e-46 Score=301.13 Aligned_cols=155 Identities=25% Similarity=0.386 Sum_probs=137.8
Q ss_pred CCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhcC--C--------CcCCceEeEEecCCEEEeecCCCCCCCC
Q 027035 27 GSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--G--------CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (229)
Q Consensus 27 ~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~~--g--------~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (229)
.+++|.|+++ .|+|+||||++.||+||+||++||++ | ||+|+.||||+|+|++||||+..+.+..
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 81 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTG 81 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCC
Confidence 4679999987 89999999999999999999999986 5 7999999999999999999997654332
Q ss_pred CccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCC
Q 027035 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170 (229)
Q Consensus 92 ~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~ 170 (229)
.. ...+..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|++++++.
T Consensus 82 g~----siyg~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~ 156 (173)
T 2igv_A 82 GE----SIYGEKFPDENFKEKHTGPGVLSMAN-AGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQS 156 (173)
T ss_dssp CC----BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT
T ss_pred CC----ccCCCcccCcccccCCCCCeEEEEee-CCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 11 1135678888889999 689999999 68999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCCcceEEEEeeeec
Q 027035 171 EGIFVMPTERITIHSSYYYD 190 (229)
Q Consensus 171 ~~~~~~P~~~i~I~~~~vl~ 190 (229)
+ +|.++|+|.+|++++
T Consensus 157 -~---~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 157 -G---KPVKDCMIADCGQLK 172 (173)
T ss_dssp -S---CCSSCEEEEEEEEEC
T ss_pred -C---CCCCCEEEEEeEEEc
Confidence 4 999999999999985
No 21
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=5.3e-46 Score=297.55 Aligned_cols=153 Identities=25% Similarity=0.389 Sum_probs=136.1
Q ss_pred CcEEEEEE-----eCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccccccc
Q 027035 28 SARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99 (229)
Q Consensus 28 ~~~v~~~T-----~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 99 (229)
+++|.|++ ++|+|+||||++.||+||+||++||+ .|| |+|+.||||+|+|++||||+..+.+.... ..
T Consensus 3 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----si 78 (165)
T 2z6w_A 3 NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGK----SI 78 (165)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCC----BT
T ss_pred CCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCC----cc
Confidence 67899987 58999999999999999999999999 899 99999999999999999999764433111 11
Q ss_pred cCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCC
Q 027035 100 AEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178 (229)
Q Consensus 100 ~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~ 178 (229)
.+..+++|...++| ++|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++.++. ++ +|.
T Consensus 79 ~g~~f~dE~~~l~h~~~G~lsmA~-~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~-~~---~P~ 153 (165)
T 2z6w_A 79 YGSRFPDENFTLKHVGPGVLSMAN-AGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSK-SG---RTS 153 (165)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT-TS---CCS
T ss_pred cCCcccCcccccccCCCCEEEEee-CCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCC-CC---CCC
Confidence 35568888888999 689999999 6799999999999999999999999999999999999999999874 44 999
Q ss_pred cceEEEEeeee
Q 027035 179 ERITIHSSYYY 189 (229)
Q Consensus 179 ~~i~I~~~~vl 189 (229)
++|+|.+|+++
T Consensus 154 ~~v~I~~~g~l 164 (165)
T 2z6w_A 154 KKIVITDCGQL 164 (165)
T ss_dssp SCEEEEEEEEC
T ss_pred CcEEEEEeEEE
Confidence 99999999997
No 22
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=4e-46 Score=299.64 Aligned_cols=154 Identities=28% Similarity=0.450 Sum_probs=137.2
Q ss_pred CCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhc-CCC--------cCCceEeEEecCCEEEeecCCCCCCCCC
Q 027035 27 GSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVR-LGC--------YNTNHFFRVDKGFVAQVADVVGGRSAPM 92 (229)
Q Consensus 27 ~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~-~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~ 92 (229)
.+++|.|+++ .|+|+||||++.||+||+||++||+ .++ |+|+.||||+|+|++||||+..+.+...
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 81 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGG 81 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 3679999988 8999999999999999999999998 488 9999999999999999999976444321
Q ss_pred ccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCC
Q 027035 93 NEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKE 171 (229)
Q Consensus 93 ~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~ 171 (229)
. ...+..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|+++++ .+
T Consensus 82 ~----si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~ 155 (170)
T 1qng_A 82 E----SIYGRSFTDENFNMKHDQPGLLSMAN-AGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KS 155 (170)
T ss_dssp C----BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TT
T ss_pred c----cccCCcccccccccccCCCCEEEEee-cCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CC
Confidence 1 1135678888888999 699999998 689999999999999999999999999999999999999999999 44
Q ss_pred CCCCCCCcceEEEEeeee
Q 027035 172 GIFVMPTERITIHSSYYY 189 (229)
Q Consensus 172 ~~~~~P~~~i~I~~~~vl 189 (229)
+ +|.++|+|.+|+++
T Consensus 156 ~---~P~~~v~I~~cG~l 170 (170)
T 1qng_A 156 G---YVKRSVVITDCGEL 170 (170)
T ss_dssp C---CCSSCEEEEEEEEC
T ss_pred C---CCCCCeEEEeceeC
Confidence 5 99999999999985
No 23
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.1e-47 Score=316.93 Aligned_cols=161 Identities=28% Similarity=0.400 Sum_probs=140.8
Q ss_pred CCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCCCCCcccccccc--Ccc
Q 027035 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRSAPMNEVQRVEA--EKT 103 (229)
Q Consensus 27 ~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~~~~~~~~~~~~--~~~ 103 (229)
.++.|.|+|++|+|+||||++.||+||+||++||+.|||+|+.||||+++|+|||||+.+ +.+.+ ... |..
T Consensus 20 ~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~------si~~~g~~ 93 (232)
T 3bkp_A 20 TRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGA------DTTFDGKP 93 (232)
T ss_dssp CBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCC------CCTTTTCC
T ss_pred CCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCC------ccccCCCc
Confidence 457999999999999999999999999999999999999999999999999999999985 22221 012 667
Q ss_pred ccCCc-CCCCC-CccEEEEecCCCC-------------CCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHH--HHHHhcC
Q 027035 104 VVGEF-SDVKH-VRGILSMGRYSDP-------------NSAASSFSILLGDAPHLDGQYAVFGKVTKGDET--LRKLEGL 166 (229)
Q Consensus 104 ~~~e~-~~l~h-~~G~lsma~~~~~-------------~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~v--l~~I~~~ 166 (229)
+++|. +.++| .+|+||||+.+.+ ++++|||||++++++|||++|+|||+|+ ||++ |++|+.+
T Consensus 94 f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~ 172 (232)
T 3bkp_A 94 FDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDL 172 (232)
T ss_dssp BCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTS
T ss_pred cCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcC
Confidence 88884 68898 8999999995433 6999999999999999999999999999 7765 8999999
Q ss_pred CCCCCCCCCCCCcceEEEEeeeecCCcchhH
Q 027035 167 PTRKEGIFVMPTERITIHSSYYYDTEMEICE 197 (229)
Q Consensus 167 ~~~~~~~~~~P~~~i~I~~~~vl~~~~~~~~ 197 (229)
+++.++ +|.++|+|.+|+++.+||++..
T Consensus 173 ~t~~~~---~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 173 EVGKED---RPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp CBCGGG---CBSSCCBEEEEEEEECCCTTCC
T ss_pred CcCCCC---CcCCCeEEEEEEEEcCChhhhh
Confidence 998877 9999999999999999998754
No 24
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=5e-46 Score=300.85 Aligned_cols=155 Identities=30% Similarity=0.383 Sum_probs=138.1
Q ss_pred CCcEEEEEE-----eCceEEEEEcCCCCchhHHHHHHhhcC--------C---CcCCceEeEEecCCEEEeecCCCCCCC
Q 027035 27 GSARVVFQT-----NYGDIEFGFYPSVAPQTVDHIFKLVRL--------G---CYNTNHFFRVDKGFVAQVADVVGGRSA 90 (229)
Q Consensus 27 ~~~~v~~~T-----~~G~I~ieL~~d~aP~t~~nF~~l~~~--------g---~Y~g~~f~ri~~~~~iq~Gd~~~~~~~ 90 (229)
.+++|.|++ +.|+|+||||++.||+||+||++||++ | ||+|+.||||+|+|++||||+..+.+.
T Consensus 5 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 84 (177)
T 1a58_A 5 DRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGT 84 (177)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSS
T ss_pred CCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCC
Confidence 467899986 489999999999999999999999984 4 899999999999999999999754443
Q ss_pred CCccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCC
Q 027035 91 PMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTR 169 (229)
Q Consensus 91 ~~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~ 169 (229)
... ...+..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|++++++
T Consensus 85 gg~----si~g~~f~dE~~~~~h~~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~ 159 (177)
T 1a58_A 85 GGE----SIYGGMFDDEEFVMKHDEPFVVSMAN-KGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTN 159 (177)
T ss_dssp CCC----CTTSSCBCCCCCCSCCCSSSEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBC
T ss_pred CCC----cccCCcccCcccCcccCCCeEEEEee-CCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCC
Confidence 211 1135678888778889 899999999 6899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcceEEEEeeee
Q 027035 170 KEGIFVMPTERITIHSSYYY 189 (229)
Q Consensus 170 ~~~~~~~P~~~i~I~~~~vl 189 (229)
.++ +|.++|+|.+|+++
T Consensus 160 ~~~---~P~~~v~I~~~G~l 176 (177)
T 1a58_A 160 SKN---RPLADVVILNCGEL 176 (177)
T ss_dssp TTS---CBSSCEEEEEEEEE
T ss_pred CCC---cCCCCeEEEEeEEE
Confidence 877 99999999999987
No 25
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=4.3e-46 Score=299.44 Aligned_cols=156 Identities=29% Similarity=0.409 Sum_probs=138.8
Q ss_pred CCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhh--cCCC-cCCceEeEEecCCEEEeecCCCCCCCCCccccc
Q 027035 26 LGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLV--RLGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (229)
Q Consensus 26 ~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~--~~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (229)
..+++|.|+ |+.|+|+||||++.||+||+||++|| +.|| |+|+.||||+|+|++||||+..+.+....
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 84 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGK---- 84 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCc----
Confidence 346788887 56899999999999999999999999 6889 99999999999999999997654432111
Q ss_pred cccCccccCCcCCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCC
Q 027035 98 VEAEKTVVGEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMP 177 (229)
Q Consensus 98 ~~~~~~~~~e~~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P 177 (229)
...|..+++|...++|.+|+||||+ .+|++++|||||+++++++||++|+|||+|++|||||++|++++++.++ +|
T Consensus 85 si~g~~f~dE~~~l~h~~G~lsmAn-~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~---~P 160 (172)
T 2haq_A 85 SIYGEKFADENLNVKHFVGALSMAN-AGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD---RP 160 (172)
T ss_dssp CSSSSCBCCCCCCSCCCTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG---CB
T ss_pred cccCCcccCcCCCcccCceEEEEcc-CCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC---cC
Confidence 1136678889888999999999999 6799999999999999999999999999999999999999999998887 99
Q ss_pred CcceEEEEeeee
Q 027035 178 TERITIHSSYYY 189 (229)
Q Consensus 178 ~~~i~I~~~~vl 189 (229)
.++|+|.+|+++
T Consensus 161 ~~~v~I~~~g~l 172 (172)
T 2haq_A 161 VKPVKIVASGEL 172 (172)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEEeEEC
Confidence 999999999985
No 26
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=5.3e-46 Score=302.22 Aligned_cols=156 Identities=27% Similarity=0.401 Sum_probs=137.8
Q ss_pred CCCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhcCCC---cCCceEeEEecCCEEEeecCCCCCCCCCccccc
Q 027035 26 LGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRLGC---YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (229)
Q Consensus 26 ~~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~~g~---Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (229)
+.+++|.|+|+ .|+|+||||++.||+||+||++||+.++ |+|+.||||+|+|++||||+..+.+....
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 95 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGK---- 95 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCc----
Confidence 46789999988 9999999999999999999999997655 99999999999999999997765443211
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCC
Q 027035 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (229)
Q Consensus 98 ~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~ 176 (229)
...+..+++|...++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|++|||||++|++++++. + +
T Consensus 96 si~g~~~~de~~~l~h~~~G~lsmA~-~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-g---~ 170 (184)
T 3rdd_A 96 SIYGEKFEDENFILKHTGPGILSMAN-AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRN-G---K 170 (184)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-S---C
T ss_pred ccCCCcccCcccccccCCCcEEEEEe-CCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCC-C---C
Confidence 1135667888778999 799999999 68999999999999999999999999999999999999999999864 4 9
Q ss_pred CCcceEEEEeeeec
Q 027035 177 PTERITIHSSYYYD 190 (229)
Q Consensus 177 P~~~i~I~~~~vl~ 190 (229)
|.++|+|.+|++++
T Consensus 171 P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 171 TSKKITIADCGQLE 184 (184)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CcCCeEEEeCeEEC
Confidence 99999999999984
No 27
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=8.4e-46 Score=296.30 Aligned_cols=153 Identities=29% Similarity=0.393 Sum_probs=135.8
Q ss_pred CcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccccccc
Q 027035 28 SARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVE 99 (229)
Q Consensus 28 ~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~ 99 (229)
+++|.|+ |+.|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+.... ..
T Consensus 2 ~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----si 77 (164)
T 3pmp_A 2 MANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGK----SI 77 (164)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCC----BT
T ss_pred CCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCc----cc
Confidence 4567766 789999999999999999999999999 788 99999999999999999997654433211 11
Q ss_pred cCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCC
Q 027035 100 AEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPT 178 (229)
Q Consensus 100 ~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~ 178 (229)
.+..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++. + +|.
T Consensus 78 ~g~~~~dE~~~l~h~~~G~lsma~-~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~-~---~P~ 152 (164)
T 3pmp_A 78 YGEKFADENFQVKHTKPGLLSMAN-AGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSAS-G---KTN 152 (164)
T ss_dssp TBSCBCCCCCCSCCCSTTEEEECB-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C---CCS
T ss_pred CCccccccccccCcCCCcEEEEee-CCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCC-C---Ccc
Confidence 46678888888999 789999999 67999999999999999999999999999999999999999999974 4 899
Q ss_pred cceEEEEeeee
Q 027035 179 ERITIHSSYYY 189 (229)
Q Consensus 179 ~~i~I~~~~vl 189 (229)
++|+|.+|+++
T Consensus 153 ~~v~I~~cg~l 163 (164)
T 3pmp_A 153 ATIKITDCGTV 163 (164)
T ss_dssp SCEEEEEEEEC
T ss_pred cCEEEEeCeEE
Confidence 99999999997
No 28
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3e-46 Score=304.28 Aligned_cols=157 Identities=29% Similarity=0.393 Sum_probs=140.1
Q ss_pred CCCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhcC--C-CcCCceEeEEecCCEEEeecCCCCCCCCCccccc
Q 027035 26 LGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--G-CYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQR 97 (229)
Q Consensus 26 ~~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~~--g-~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~ 97 (229)
..+++|.|+++ .|+|+||||++.||+||+||++||++ | +|+|+.||||+|+|++||||+..+.+....
T Consensus 10 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~---- 85 (185)
T 4fru_A 10 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGK---- 85 (185)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC----
T ss_pred CcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCc----
Confidence 34678999987 89999999999999999999999976 5 799999999999999999999865443211
Q ss_pred cccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCC
Q 027035 98 VEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIFVM 176 (229)
Q Consensus 98 ~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~ 176 (229)
...+..+++|...++| .+|+||||+ .+|++++|||||++++++|||++|+|||+|++|||||++|++++++.++ +
T Consensus 86 si~g~~f~de~~~~~h~~~G~lsma~-~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~---~ 161 (185)
T 4fru_A 86 SIYGERFPDENFKLKHYGPGWVSMAN-AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRD---K 161 (185)
T ss_dssp BTTBSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTS---C
T ss_pred cccCCccCccccccCcCCCeEEEEee-CCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCC---c
Confidence 1135678888878999 899999999 6799999999999999999999999999999999999999999999877 9
Q ss_pred CCcceEEEEeeeec
Q 027035 177 PTERITIHSSYYYD 190 (229)
Q Consensus 177 P~~~i~I~~~~vl~ 190 (229)
|.++|+|.+|+++.
T Consensus 162 P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 162 PLKDVTIADCGKIE 175 (185)
T ss_dssp BSSCEEEEEEEEEE
T ss_pred CCCCEEEEEceEEe
Confidence 99999999999984
No 29
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=301.75 Aligned_cols=158 Identities=28% Similarity=0.374 Sum_probs=138.3
Q ss_pred CCCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc-----------CCCcCCceEeEEecCCEEEeecCCCCC
Q 027035 25 QLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR-----------LGCYNTNHFFRVDKGFVAQVADVVGGR 88 (229)
Q Consensus 25 ~~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~-----------~g~Y~g~~f~ri~~~~~iq~Gd~~~~~ 88 (229)
...+++|.|+ |+.|+|+||||++.||+||+||++||+ .+||+|+.||||+|+|++||||+..+.
T Consensus 16 ~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 16 PRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp ---CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 3457788887 468999999999999999999999995 579999999999999999999997644
Q ss_pred CCCCccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCC
Q 027035 89 SAPMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLP 167 (229)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~ 167 (229)
+.... ...|..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|++++
T Consensus 96 G~gg~----siyg~~f~dE~~~l~h~~~G~lsMAn-~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 170 (192)
T 2he9_A 96 GKGGE----SIYGGYFKDENFILKHDRAFLLSMAN-RGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLK 170 (192)
T ss_dssp SSCCC----CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCCCC----cccCCcccCccccCCCCCCeEEEEEe-CCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCC
Confidence 33211 1136678888778899 799999999 67999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcceEEEEeeeec
Q 027035 168 TRKEGIFVMPTERITIHSSYYYD 190 (229)
Q Consensus 168 ~~~~~~~~~P~~~i~I~~~~vl~ 190 (229)
++.++ +|.++|+|.+|+++.
T Consensus 171 t~~~~---~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 171 TDAAS---RPYADVRVIDCGVLA 190 (192)
T ss_dssp BCTTS---CBSSCEEEEEEEECC
T ss_pred cCCCC---CCcCCeEEEEeEEEc
Confidence 98877 999999999999985
No 30
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=6.4e-45 Score=297.76 Aligned_cols=158 Identities=26% Similarity=0.375 Sum_probs=138.5
Q ss_pred CCCCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccc
Q 027035 24 PQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEV 95 (229)
Q Consensus 24 p~~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~ 95 (229)
+...+++|.|+ |+.|+|+||||++.||+||+||++||+ .++ |+|+.||||+|+|++||||+..+.+....
T Consensus 23 ~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~-- 100 (193)
T 3k2c_A 23 AKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGR-- 100 (193)
T ss_dssp C--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCC--
T ss_pred cccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCc--
Confidence 44567899999 569999999999999999999999998 667 99999999999999999997764443211
Q ss_pred cccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCCCCCC
Q 027035 96 QRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRKEGIF 174 (229)
Q Consensus 96 ~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~ 174 (229)
...+..+++|...++| .+|+||||+ .+|++++|||||+++++++||++|+|||+|++|||||++|++++++. +
T Consensus 101 --si~g~~f~dE~~~l~h~~~G~lsmAn-~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~-g-- 174 (193)
T 3k2c_A 101 --SIYGEKFPDENFELKHTKEGILSMAN-CGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSES-G-- 174 (193)
T ss_dssp --CTTSSCBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-C--
T ss_pred --ccCCCcccccccccccCCCcEEEEEe-CCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCC-C--
Confidence 1136678888888999 899999999 67999999999999999999999999999999999999999999985 4
Q ss_pred CCCC--cceEEEEeeeec
Q 027035 175 VMPT--ERITIHSSYYYD 190 (229)
Q Consensus 175 ~~P~--~~i~I~~~~vl~ 190 (229)
+|. ++|+|.+|+++.
T Consensus 175 -~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 175 -QVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp -CCCTTCCEEEEEEEECC
T ss_pred -cCccCccEEEEEceEeC
Confidence 899 999999999985
No 31
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=3.8e-45 Score=297.32 Aligned_cols=155 Identities=28% Similarity=0.384 Sum_probs=135.5
Q ss_pred CCCCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhc--CCC--------cCCceEeEEecCCEEEeecCCCCCC
Q 027035 25 QLGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVR--LGC--------YNTNHFFRVDKGFVAQVADVVGGRS 89 (229)
Q Consensus 25 ~~~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~--~g~--------Y~g~~f~ri~~~~~iq~Gd~~~~~~ 89 (229)
...+++|.|+++ .|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+
T Consensus 16 ~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 16 FQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred cCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 345789999977 8999999999999999999999996 578 9999999999999999999976443
Q ss_pred CCCccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCC
Q 027035 90 APMNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPT 168 (229)
Q Consensus 90 ~~~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~ 168 (229)
.... ...+..+++|...++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++|||||++|+++++
T Consensus 96 ~gg~----si~g~~f~dE~~~l~h~~~G~lsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 170 (186)
T 2poy_A 96 TGGE----SIYGSKFRDENFVYTHDAPFLLSMAN-AGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS 170 (186)
T ss_dssp SCCC----CTTC-CBCCCCCCSCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC
T ss_pred CCCC----ccCCCcccCcccccccCCCcEEEEee-CCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC
Confidence 3211 1136678888888999 699999999 689999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEEEeee
Q 027035 169 RKEGIFVMPTERITIHSSYY 188 (229)
Q Consensus 169 ~~~~~~~~P~~~i~I~~~~v 188 (229)
+. + +|.++|+|.+||+
T Consensus 171 ~~-~---~P~~~v~I~~cG~ 186 (186)
T 2poy_A 171 QN-G---KPTKSVCITASGV 186 (186)
T ss_dssp TT-S---CCSSCEEEEEEEC
T ss_pred CC-C---CCCCCEEEEeCCC
Confidence 54 4 9999999999985
No 32
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=5.1e-45 Score=304.45 Aligned_cols=157 Identities=24% Similarity=0.348 Sum_probs=139.8
Q ss_pred CCCCcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhcCC--------CcCCceEeEEecCCEEEeecCCCCCCCC
Q 027035 25 QLGSARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRLG--------CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (229)
Q Consensus 25 ~~~~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~~g--------~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (229)
.+.+++|.|+|+ .|+|+||||++.||+||+||++||+++ +|+|+.||||+|+|+|||||+..+.+..
T Consensus 56 ~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 56 NPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp STTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 345789999976 899999999999999999999999987 7999999999999999999997644332
Q ss_pred CccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEE--cCHHHHHHHhcCCC
Q 027035 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVT--KGDETLRKLEGLPT 168 (229)
Q Consensus 92 ~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi--~G~~vl~~I~~~~~ 168 (229)
.. ...+..+++|...++| .+|+||||+ .+|++++|||||++.+++|||++|+|||+|+ +|||||++|+++++
T Consensus 136 g~----siyg~~f~dE~~~l~h~~~G~LsMAn-~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 136 SL----SIYGEKFDDENFDIKHDKEGLLSMAN-SGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp CC----BTTBSCCCCCCCCSCCCSTTEEEECC-SSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CC----ccCCCcccccccccccCCCcEEEecc-CCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCC
Confidence 11 1135678888888999 899999999 6799999999999999999999999999999 99999999999999
Q ss_pred CCC-CCCCCCCcceEEEEeeee
Q 027035 169 RKE-GIFVMPTERITIHSSYYY 189 (229)
Q Consensus 169 ~~~-~~~~~P~~~i~I~~~~vl 189 (229)
+.+ + +|.++|+|.+|+++
T Consensus 211 ~~~~~---~P~~~V~I~~cG~l 229 (229)
T 1z81_A 211 TPYIY---KPKIPINVVECGEL 229 (229)
T ss_dssp CTTTC---CBSSCEEEEEEEEC
T ss_pred CCCCC---CCCCCeEEEeCeeC
Confidence 875 6 99999999999985
No 33
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=3.9e-45 Score=306.89 Aligned_cols=168 Identities=19% Similarity=0.210 Sum_probs=138.7
Q ss_pred CCCCCCcEEEEE-----EeCceEEEEEcCCCCchhHHHHHHhhcC-----------------C--C-cCCceEeEEecCC
Q 027035 23 DPQLGSARVVFQ-----TNYGDIEFGFYPSVAPQTVDHIFKLVRL-----------------G--C-YNTNHFFRVDKGF 77 (229)
Q Consensus 23 ~p~~~~~~v~~~-----T~~G~I~ieL~~d~aP~t~~nF~~l~~~-----------------g--~-Y~g~~f~ri~~~~ 77 (229)
.....+++|.|+ |+.|+|+||||++.||+||+||++||++ | | |+|+.||||+++|
T Consensus 9 p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F 88 (234)
T 2ose_A 9 PNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN 88 (234)
T ss_dssp CCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT
T ss_pred CcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC
Confidence 334567899998 8999999999999999999999999984 4 6 9999999999999
Q ss_pred EEEeecCCCCCCCCCccccccccCcc-ccCC--cCCCCC-CccEEEEecC---CCCCCCcccEEEEcCC------CCCCC
Q 027035 78 VAQVADVVGGRSAPMNEVQRVEAEKT-VVGE--FSDVKH-VRGILSMGRY---SDPNSAASSFSILLGD------APHLD 144 (229)
Q Consensus 78 ~iq~Gd~~~~~~~~~~~~~~~~~~~~-~~~e--~~~l~h-~~G~lsma~~---~~~~~~~sqFfI~l~~------~~~ld 144 (229)
+|||||+..+.+..... ..|.. ++.| ...++| .+|+||||+. .+|++++|||||++++ .+|||
T Consensus 89 miQgGd~~~g~G~Gg~s----iyg~~~~p~~f~~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LD 164 (234)
T 2ose_A 89 YIVSGDIYNSNGSSAGT----VYCDEPIPPVFGDYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELD 164 (234)
T ss_dssp EEEECCCC----CCCCC----TTTTCCBCCCCCSCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSC
T ss_pred EEEcCCccCCCCCCCcc----ccCCccCcccccCcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccC
Confidence 99999976543321110 01222 2221 247899 7999999994 5799999999999999 89999
Q ss_pred CCCcEEEEEEcCHHHHHHHhcCCCCCCCCCCCCCcceEEEEeeeecCCcchhH
Q 027035 145 GQYAVFGKVTKGDETLRKLEGLPTRKEGIFVMPTERITIHSSYYYDTEMEICE 197 (229)
Q Consensus 145 ~~~~vFG~Vi~G~~vl~~I~~~~~~~~~~~~~P~~~i~I~~~~vl~~~~~~~~ 197 (229)
++|+|||+|++|||||++|++++++.++ +|.++|+|.+|+++++++++.+
T Consensus 165 g~~tVFG~Vv~GmdVv~~I~~~~t~~~~---~P~~~V~I~~~~~l~~p~~~~~ 214 (234)
T 2ose_A 165 RDQVVIGQVYGGLDVLDKINSMIKPYAG---RKYPTFSIGKCGAYLDSSQAQR 214 (234)
T ss_dssp TTSEEEEEEEECHHHHHHHHHHTCCCTT---CCCCCEEEEEEEECCCHHHHCC
T ss_pred CCeeEEEEEeCCHHHHHHHHhCCcCCCC---CccCCEEEEEEEEecCCccccc
Confidence 9999999999999999999999998877 9999999999999998876544
No 34
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=3.3e-44 Score=288.84 Aligned_cols=149 Identities=27% Similarity=0.390 Sum_probs=110.9
Q ss_pred EEeCceEEEEEcCCCCchhHHHHHHhhc--CCC-cCCceEeEEecCCEEEeecCCCCCCCCCccccccccCccccCCcCC
Q 027035 34 QTNYGDIEFGFYPSVAPQTVDHIFKLVR--LGC-YNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKTVVGEFSD 110 (229)
Q Consensus 34 ~T~~G~I~ieL~~d~aP~t~~nF~~l~~--~g~-Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~~~~~e~~~ 110 (229)
.|++|+|+||||++.||+||+||++||+ .|+ |+|+.||||+|+|++||||+..+.+.... ...+..+++|...
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~----si~g~~f~dE~~~ 93 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGR----SIYGDKFADENFS 93 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC--------------------------C
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCc----ccCCCcccCcccc
Confidence 3677999999999999999999999999 678 99999999999999999996544332110 1135678888778
Q ss_pred CCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEc--CHHHHHHHhcCCCCCCCCCCCCCcceEEEEee
Q 027035 111 VKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTK--GDETLRKLEGLPTRKEGIFVMPTERITIHSSY 187 (229)
Q Consensus 111 l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~--G~~vl~~I~~~~~~~~~~~~~P~~~i~I~~~~ 187 (229)
++| .+|+||||+ .+|++++|||||+++++||||++|+|||+|++ |||||++|++++++.++ .+|.++|+|.+|+
T Consensus 94 ~~h~~~G~lsmA~-~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~--~~P~~~v~I~~cG 170 (172)
T 2c3b_A 94 RKHDKKGILSMAN-AGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGS--VRSNTRPKIVNCG 170 (172)
T ss_dssp HHHHHTCEEEEC----------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSC--CCSSSCCEEEEEE
T ss_pred cccCCCeEEEEee-CCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCC--ccCCCCeEEEeCe
Confidence 888 899999999 68999999999999999999999999999999 99999999999997642 2899999999999
Q ss_pred ee
Q 027035 188 YY 189 (229)
Q Consensus 188 vl 189 (229)
++
T Consensus 171 ~l 172 (172)
T 2c3b_A 171 EL 172 (172)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=6.4e-42 Score=305.59 Aligned_cols=155 Identities=26% Similarity=0.382 Sum_probs=140.1
Q ss_pred CcEEEEEEe-----CceEEEEEcCCCCchhHHHHHHhhcC--------C---CcCCceEeEEecCCEEEeecCCCCCCCC
Q 027035 28 SARVVFQTN-----YGDIEFGFYPSVAPQTVDHIFKLVRL--------G---CYNTNHFFRVDKGFVAQVADVVGGRSAP 91 (229)
Q Consensus 28 ~~~v~~~T~-----~G~I~ieL~~d~aP~t~~nF~~l~~~--------g---~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~ 91 (229)
+++|.|+|+ .|+|+||||++.||+||+||++||++ | +|+|+.||||+|+|+|||||+..+.|..
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 789999998 89999999999999999999999987 6 7999999999999999999998655442
Q ss_pred CccccccccCccccCCcCCCCC-CccEEEEecCCCCCCCcccEEEEcCCCCCCCCCCcEEEEEEcCHHHHHHHhcCCCCC
Q 027035 92 MNEVQRVEAEKTVVGEFSDVKH-VRGILSMGRYSDPNSAASSFSILLGDAPHLDGQYAVFGKVTKGDETLRKLEGLPTRK 170 (229)
Q Consensus 92 ~~~~~~~~~~~~~~~e~~~l~h-~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~~~~vFG~Vi~G~~vl~~I~~~~~~~ 170 (229)
.. ...|..+++|...++| .+|+||||+ .+|+++||||||+++++||||++|+|||+|++||+||++|+..+++.
T Consensus 95 ~~----~~~~~~~~~e~~~~~~~~~g~l~ma~-~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~ 169 (370)
T 1ihg_A 95 GE----SIYGEKFEDENFHYKHDKEGLLSMAN-AGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG 169 (370)
T ss_dssp CC----BTTBSCBCCCCCCBCCCSTTEEEECC-SSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET
T ss_pred CC----CCCCCCcCCCcCCcCCCCCeEEEEee-CCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC
Confidence 11 1236678888778899 899999999 56999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCcceEEEEeeeecC
Q 027035 171 EGIFVMPTERITIHSSYYYDT 191 (229)
Q Consensus 171 ~~~~~~P~~~i~I~~~~vl~~ 191 (229)
+ +|..+|+|.+|+++..
T Consensus 170 -~---~P~~~v~I~~~g~l~~ 186 (370)
T 1ihg_A 170 -E---KPAKLCVIAECGELKE 186 (370)
T ss_dssp -T---EESSCEEEEEEEEECT
T ss_pred -C---ccceeEEEEEEEEecc
Confidence 5 9999999999999954
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=2.4e-36 Score=266.92 Aligned_cols=139 Identities=27% Similarity=0.295 Sum_probs=113.6
Q ss_pred CCCcEEEEEEe--------CceEEEEEcCCCCchhHHHHHHhhcCCCcCCceEeEEecCCEEEeecCCC-CCC--CC---
Q 027035 26 LGSARVVFQTN--------YGDIEFGFYPSVAPQTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVG-GRS--AP--- 91 (229)
Q Consensus 26 ~~~~~v~~~T~--------~G~I~ieL~~d~aP~t~~nF~~l~~~g~Y~g~~f~ri~~~~~iq~Gd~~~-~~~--~~--- 91 (229)
.++++|.|+|+ .|+|+|+||++.||+||+||++||+.|||+|+.|||| ++|++||||+.+ +.| .+
T Consensus 168 ~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~G~G~~~~~~g 246 (369)
T 3rfy_A 168 KGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGPAEGFIDPSTE 246 (369)
T ss_dssp CSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCCCSCCCSCCCC
T ss_pred CCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCCCCCccCcccC
Confidence 46789999998 8999999999999999999999999999999999999 999999999986 222 00
Q ss_pred ----Ccccc------ccccCccccCC-----cCCCCC-CccEEEEecC-CCCCCCcccEEEEc-------CCCCCCCCCC
Q 027035 92 ----MNEVQ------RVEAEKTVVGE-----FSDVKH-VRGILSMGRY-SDPNSAASSFSILL-------GDAPHLDGQY 147 (229)
Q Consensus 92 ----~~~~~------~~~~~~~~~~e-----~~~l~h-~~G~lsma~~-~~~~~~~sqFfI~l-------~~~~~ld~~~ 147 (229)
...+. ...++..+.+| .+.++| .+|+||||+. .+||+++|||||++ ++.+|||++|
T Consensus 247 ~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgky 326 (369)
T 3rfy_A 247 KTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRY 326 (369)
T ss_dssp CCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCE
T ss_pred cCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCe
Confidence 11110 00112223333 246776 9999999995 38999999999999 4789999999
Q ss_pred cEEEEEEcCHHHHHHHhc
Q 027035 148 AVFGKVTKGDETLRKLEG 165 (229)
Q Consensus 148 ~vFG~Vi~G~~vl~~I~~ 165 (229)
+|||+|++|||||++|++
T Consensus 327 tVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 327 AVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp EEEEEEEESTTGGGGCCT
T ss_pred eEEEEEecCHHHHHHHhC
Confidence 999999999999999987
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.43 E-value=0.23 Score=39.21 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=63.2
Q ss_pred EEEEEEeCce--EEEEEcCCCCchhHHHHHHhhc--C----CCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccC
Q 027035 30 RVVFQTNYGD--IEFGFYPSVAPQTVDHIFKLVR--L----GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAE 101 (229)
Q Consensus 30 ~v~~~T~~G~--I~ieL~~d~aP~t~~nF~~l~~--~----g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~ 101 (229)
+..++...+. ++.+|..+.||+||+.|.++.= + .-|.|..++-..+.+ ..
T Consensus 23 ~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~LP~~~~viHarwSGeeVy~~lp~f-------~~--------------- 80 (188)
T 3kop_A 23 YINITLEKRGVTCKALLLDDVAPRTSKAVWDALPQSSQVFHGKYARNEIYNLVPAF-------AP--------------- 80 (188)
T ss_dssp EEEEEETTTTEEEEEEECTTTSHHHHHHHHHHCCEEEECEECSSSSSEEEEEEECC-------SS---------------
T ss_pred EEEEEEecCCeEEEEEEccccChHHHHHHHHhCCCCcceEEEEEecceEEEECCcc-------cc---------------
Confidence 4555555444 6889999999999999999762 1 124555444433332 10
Q ss_pred ccccCCcCCCCCCccEEEEecC-----C------------CCCCCcccEEEEcCCCCC-CCCC-----CcEEEEEEcCHH
Q 027035 102 KTVVGEFSDVKHVRGILSMGRY-----S------------DPNSAASSFSILLGDAPH-LDGQ-----YAVFGKVTKGDE 158 (229)
Q Consensus 102 ~~~~~e~~~l~h~~G~lsma~~-----~------------~~~~~~sqFfI~l~~~~~-ld~~-----~~vFG~Vi~G~~ 158 (229)
..++.|++.....+|-|++-.. + +..+...++.|-.+.+-. +.++ -.+|++|++|+|
T Consensus 81 ~~~g~EN~T~~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~TIveGle 160 (188)
T 3kop_A 81 KEPGAENTTVTPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFATIVEGLD 160 (188)
T ss_dssp SCCCSCSEESSCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEEEEESHH
T ss_pred cCCCcCCCCCCCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEEEecCHH
Confidence 1122233333335666554210 0 011122466666666542 1221 269999999999
Q ss_pred HHHHHhc
Q 027035 159 TLRKLEG 165 (229)
Q Consensus 159 vl~~I~~ 165 (229)
-+.++.+
T Consensus 161 ~la~~c~ 167 (188)
T 3kop_A 161 EMAAACQ 167 (188)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=95.36 E-value=0.052 Score=41.98 Aligned_cols=104 Identities=18% Similarity=0.250 Sum_probs=64.5
Q ss_pred CCcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhcC----CCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccCc
Q 027035 27 GSARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVRL----GCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEK 102 (229)
Q Consensus 27 ~~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~~----g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~ 102 (229)
..+++.|...-..++++|+.+.||+||+.|+++.=- ..|.+ .++--.| .
T Consensus 28 ~~~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~LPl~~~~~~~g~-E~y~~lp--------------------------~ 80 (153)
T 2nnz_A 28 VEMRLRIRFESAECEVELYEEWAPETVRAIADALPIKSTANRWGD-EIYFTTQ--------------------------V 80 (153)
T ss_dssp SCCCEEEEETTEEEEECCCTTSCHHHHHHHHHTCSEEEEEEEETT-EEEECCS--------------------------C
T ss_pred CCeEEEEEECCEEEEEEEcCCCCHHHHHHHHHhCCcEEEHHhhCC-cEEEECC--------------------------C
Confidence 356788888888899999999999999999998611 01211 1111000 0
Q ss_pred cccC-CcCCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCC------CCcEEEEEEcCHHHHHHH
Q 027035 103 TVVG-EFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG------QYAVFGKVTKGDETLRKL 163 (229)
Q Consensus 103 ~~~~-e~~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~------~~~vFG~Vi~G~~vl~~I 163 (229)
.++. |........|-|++-..++ .+.|-+++.|...+ .-.+||+|++|++.|.++
T Consensus 81 ~l~~~en~~~~~~~GDI~Yy~pg~------~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 81 AVEKEENSKDVVELGDVAYWIPGK------AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp CCCCSSCCBCCCCTTEEEEETTTT------EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred CCCCCCCCcccCCCCeEEEeCCCC------EEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 1111 2222233788888765221 37787887753322 247899999998876554
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=87.47 E-value=3.7 Score=30.83 Aligned_cols=101 Identities=17% Similarity=0.202 Sum_probs=62.2
Q ss_pred CcEEEEEEeCceEEEEEcCCCCchhHHHHHHhhc----CCCcCCceEeEEecCCEEEeecCCCCCCCCCccccccccCcc
Q 027035 28 SARVVFQTNYGDIEFGFYPSVAPQTVDHIFKLVR----LGCYNTNHFFRVDKGFVAQVADVVGGRSAPMNEVQRVEAEKT 103 (229)
Q Consensus 28 ~~~v~~~T~~G~I~ieL~~d~aP~t~~nF~~l~~----~g~Y~g~~f~ri~~~~~iq~Gd~~~~~~~~~~~~~~~~~~~~ 103 (229)
.++|.+-.....++.+|+.. |.|++.|.+..= -..|. ..++-..|..
T Consensus 12 ~~~~~~~~~~~~v~a~L~Dn--p~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~-------------------------- 62 (136)
T 1zx8_A 12 HMRVELLFESGKCVIDLNEE--YEVVKLLKEKIPFESVVNTWG-EEIYFSTPVN-------------------------- 62 (136)
T ss_dssp EEEEEEECSSCEEEEEEETT--SHHHHHHHHHCSEEEECEESS-SEEEEECSCC--------------------------
T ss_pred eeEEEEeeCCcEEEEEEcCC--HHHHHHHHHHCCcEEEHHHhC-CcEEEECCcc--------------------------
Confidence 45677777788899999754 889999999872 12232 3332222211
Q ss_pred cc-CCcCCCCCCccEEEEecCCCCCCCcccEEEEcCCCCCCCC------CCcEEEEEEcCHHHHHHH
Q 027035 104 VV-GEFSDVKHVRGILSMGRYSDPNSAASSFSILLGDAPHLDG------QYAVFGKVTKGDETLRKL 163 (229)
Q Consensus 104 ~~-~e~~~l~h~~G~lsma~~~~~~~~~sqFfI~l~~~~~ld~------~~~vFG~Vi~G~~vl~~I 163 (229)
++ +|........|-|+.-..+ ..|.|-+++.|...+ .-.+||+|.+|++.+..+
T Consensus 63 l~~~e~~~~~~~~GDIaYw~pg------g~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 63 VQKMENPREVVEIGDVGYWPPG------KALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp CCCCSSEESSBCTTEEEEEGGG------TEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CCCCCCCCccCCCCcEEEeCCC------CEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 11 1122223367888876522 247787887754433 357999999998876554
No 40
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=31.49 E-value=18 Score=26.47 Aligned_cols=13 Identities=8% Similarity=0.153 Sum_probs=6.5
Q ss_pred EEEEEeCceEEEE
Q 027035 31 VVFQTNYGDIEFG 43 (229)
Q Consensus 31 v~~~T~~G~I~ie 43 (229)
+.++...+.+.+.
T Consensus 31 ~~~~~~~~~V~F~ 43 (130)
T 2a3m_A 31 LKMENTKMPVIFN 43 (130)
T ss_dssp EEECSSSSCEEEC
T ss_pred ccccCCCCCcccC
Confidence 3344455555553
No 41
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=31.21 E-value=25 Score=27.67 Aligned_cols=13 Identities=15% Similarity=0.439 Sum_probs=6.1
Q ss_pred ceEEEEEcCCCCc
Q 027035 38 GDIEFGFYPSVAP 50 (229)
Q Consensus 38 G~I~ieL~~d~aP 50 (229)
+.|+|....+..|
T Consensus 29 ~~l~v~~~~~~~P 41 (259)
T 4dz1_A 29 RTLNVAVSPASPP 41 (259)
T ss_dssp CEEEEEECCCBTT
T ss_pred CeEEEEECCCCCC
Confidence 3445544444444
No 42
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=23.89 E-value=32 Score=25.92 Aligned_cols=16 Identities=13% Similarity=0.301 Sum_probs=11.8
Q ss_pred EEEEEeCce----EEEEEcC
Q 027035 31 VVFQTNYGD----IEFGFYP 46 (229)
Q Consensus 31 v~~~T~~G~----I~ieL~~ 46 (229)
=+++|..|+ |.|+|+.
T Consensus 35 HVLDt~~G~PA~gv~V~L~~ 54 (147)
T 4ank_A 35 KVLDAVRGSPAINVAVHVFR 54 (147)
T ss_dssp EEEETTTTEECCSCEEEEEE
T ss_pred EEEeCCCCcCCCCCEEEEEE
Confidence 456777776 8999975
No 43
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=23.47 E-value=16 Score=18.51 Aligned_cols=15 Identities=20% Similarity=0.541 Sum_probs=12.1
Q ss_pred HHHHHhhcCCCcCCc
Q 027035 54 DHIFKLVRLGCYNTN 68 (229)
Q Consensus 54 ~nF~~l~~~g~Y~g~ 68 (229)
.||.+-.+.|+|||-
T Consensus 4 knfwsslrkgfydge 18 (26)
T 2khf_A 4 KNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHTTTH
T ss_pred HHHHHHHHhhcccch
Confidence 588888888999874
Done!