BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027038
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1
Length = 230
Score = 353 bits (907), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/230 (79%), Positives = 204/230 (88%), Gaps = 1/230 (0%)
Query: 1 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
MSSV+QGFTKSLAMT +SEIGDKTFFAAAILAMR+PRRLVL+GCL ALIVMTILSA +GW
Sbjct: 1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 61 VAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGE-AEEFEEVEKKLDADFKANAGATK 119
APNLISRK THHITT+LFFGFGLWSLWD F +GG +EE EVE +LDAD KAN + K
Sbjct: 61 AAPNLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPK 120
Query: 120 EGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLG 179
+ SK +DE KKQ R FL QFFSPIFLKAFSI FFGEWGDKSQLATIGLAADENPFGVVLG
Sbjct: 121 DSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLG 180
Query: 180 GIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPVKS 229
G++ Q LCTTAAVIGGKSLASQISE+IVALSGG+LFI+FGIQS+L+ V++
Sbjct: 181 GVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSYLTSVEA 230
>sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=2 SV=1
Length = 228
Score = 346 bits (888), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 179/229 (78%), Positives = 198/229 (86%), Gaps = 1/229 (0%)
Query: 1 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
M S++QGFTKSLAMT LSEIGDKTFFAAAILAMR+PRRLVL+GCL ALIVMTILSA +GW
Sbjct: 1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 61 VAPNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKE 120
APNLISRK THHITT LFFGFGLWSLWD F +GG +EE EVE +LD+D K +K
Sbjct: 61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKN 120
Query: 121 GSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG 180
SK +DE KKQ+RPFL FFSPIFLKAFSI FFGEWGDKSQLATIGLAADENP GVVLGG
Sbjct: 121 -SKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGG 179
Query: 181 IIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPVKS 229
I+ Q LCTTAAV+GGKSLASQISE+IVALSGG+LFI+FGIQS L+PV +
Sbjct: 180 IVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTPVDA 228
>sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100
PE=2 SV=1
Length = 232
Score = 330 bits (847), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 198/223 (88%)
Query: 3 SVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVA 62
S++ GFTKSLAMTVLSEIGDKTFFAAAILAMR+PR+LVL+GCL +L VMT LS +GWVA
Sbjct: 4 SLLGGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAGCLTSLTVMTALSVSLGWVA 63
Query: 63 PNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGS 122
PNLISRK THH+TT+LFF FG+ SLW+ F + G++EE EVE +LDA+FK+N +K S
Sbjct: 64 PNLISRKWTHHVTTLLFFVFGILSLWEGFKEDGDSEELAEVEAELDANFKSNKAESKSKS 123
Query: 123 KADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGII 182
KA+D+ KKQ+RPF+LQFFSPIF+KAFSITFFGEWGDKSQ+ATIGLAADENPFGVVLGG++
Sbjct: 124 KANDDKKKQQRPFVLQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGVL 183
Query: 183 GQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLS 225
QALCTTAAV+GGKSLASQISEK+V LS GVLF++FGI S+LS
Sbjct: 184 AQALCTTAAVMGGKSLASQISEKMVGLSSGVLFLLFGIMSYLS 226
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500
PE=2 SV=1
Length = 279
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 136/216 (62%), Gaps = 13/216 (6%)
Query: 11 SLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKL 70
SL+M ++SEIGD+TF AA++AMRHP+ +VLSG L AL VMT+LS +G + PNLISRK
Sbjct: 75 SLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLISRKH 134
Query: 71 THHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDELKK 130
T+ TVL+ FGL L+ A+ + + +E+E+ + K
Sbjct: 135 TNSAATVLYLFFGLRLLYIAWKSDPKGSQKKEMEEVEEKLESGQG-------------KS 181
Query: 131 QRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTA 190
R F +F +PIFL+AF +TF EWGD+SQ+ATI LA +N GV +G +G +CT+
Sbjct: 182 TLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSL 241
Query: 191 AVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSP 226
AVIGG LAS+IS++ VA GGVLF+ F + S+ P
Sbjct: 242 AVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYP 277
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3
SV=1
Length = 279
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 136/216 (62%), Gaps = 13/216 (6%)
Query: 11 SLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKL 70
SL+M ++SEIGD+TF AA++AMRHP+ +VLSG L AL VMT+LS +G + PNLISRK
Sbjct: 75 SLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGRIVPNLISRKH 134
Query: 71 THHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDELKK 130
T+ TVL+ FGL L+ A+ + + +E+E+ + K
Sbjct: 135 TNSAATVLYLFFGLRLLYIAWKSDPKGSQKKEMEEVEEKLESGQG-------------KS 181
Query: 131 QRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTA 190
R F +F +PIFL+AF +TF EWGD+SQ+ATI LA +N GV +G +G +CT+
Sbjct: 182 TLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSL 241
Query: 191 AVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSP 226
AVIGG LAS+IS++ VA GGVLF+ F + S+ P
Sbjct: 242 AVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYP 277
>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1
Length = 293
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 136/227 (59%), Gaps = 18/227 (7%)
Query: 3 SVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVA 62
SV S +M +++EIGD+TF AA++AMRHP+ VLSG L AL VMTILS +G +
Sbjct: 80 SVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIV 139
Query: 63 PNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGS 122
PNLISRK T+ TVL+ FGL L+ A+ D K+N E
Sbjct: 140 PNLISRKHTNSAATVLYAFFGLRLLYIAWRS---------------TDSKSNQKKEMEEV 184
Query: 123 KADDELKKQRRPF---LLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLG 179
+ E + + PF +F +PIFL++F +TF EWGD+SQ+ATI LA +N GV +G
Sbjct: 185 EEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIG 244
Query: 180 GIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSP 226
IG +CT+ AV+GG LAS+IS++ VA GG+LF+ F + S+ P
Sbjct: 245 ASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 291
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500
PE=2 SV=1
Length = 282
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 136/219 (62%), Gaps = 13/219 (5%)
Query: 8 FTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLIS 67
F SL+M ++SEIGD+TF AA++AMRHP+ VLSG L AL+VMTILS +G + PNLIS
Sbjct: 75 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLIS 134
Query: 68 RKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDE 127
RK T+ TVL+ FGL L+ A+ +A + +E+E+ +
Sbjct: 135 RKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQG------------ 182
Query: 128 LKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALC 187
K R +F +PIFL++F +TF EWGD+SQ+ATI LA +N GV +G +G +C
Sbjct: 183 -KSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTIC 241
Query: 188 TTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSP 226
T+ AV+GG LAS+IS+ VA GG+LF+ F + S+ P
Sbjct: 242 TSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYP 280
>sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3
SV=1
Length = 281
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 136/219 (62%), Gaps = 13/219 (5%)
Query: 8 FTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLIS 67
F SL+M ++SEIGD+TF AA++AMRHP+ VLSG L AL+VMTILS +G + PNLIS
Sbjct: 74 FFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTILSTGLGRIVPNLIS 133
Query: 68 RKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDE 127
RK T+ TVL+ FGL L+ A+ +A + +E+E+ +
Sbjct: 134 RKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAGQG------------ 181
Query: 128 LKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGIIGQALC 187
K R +F +PIFL++F +TF EWGD+SQ+ATI LA +N GV +G +G +C
Sbjct: 182 -KSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTIC 240
Query: 188 TTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSP 226
T+ AV+GG LAS+IS+ VA GG+LF+ F + S+ P
Sbjct: 241 TSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYP 279
>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1
Length = 324
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 146/234 (62%), Gaps = 19/234 (8%)
Query: 5 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPN 64
+ F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A
Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFGY-ATT 152
Query: 65 LISRKLTHHITTVLFFGFGLWSLWDAF---SDGGEAEEFEEVE---KKLDADFKAN---- 114
+I R T++++TVLF FG+ L + D G+ EE EEV+ KK D +F+
Sbjct: 153 VIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQ-EELEEVQAELKKKDEEFQRTKLLN 211
Query: 115 -AGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENP 173
G + G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P
Sbjct: 212 GPGDVETGTSITVPQKK-----WLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDP 266
Query: 174 FGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 226
+GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP
Sbjct: 267 YGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
>sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2
Length = 323
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 18/233 (7%)
Query: 5 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPN 64
+ F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A
Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGY-ATT 152
Query: 65 LISRKLTHHITTVLFFGFGLWSLWDAF---SDGGEAEEFEEVE---KKLDADFKA----N 114
+I R T++++T LF FG+ L + D G+ EE EEV+ KK D +F+ N
Sbjct: 153 VIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQ-EELEEVQAELKKKDEEFQRTKLLN 211
Query: 115 AGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPF 174
+ G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P+
Sbjct: 212 GPDVETGTSTAIPQKK-----WLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPY 266
Query: 175 GVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 226
GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP
Sbjct: 267 GVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
>sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1
Length = 323
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 145/233 (62%), Gaps = 18/233 (7%)
Query: 5 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPN 64
+ F ++++ ++SE+GDKTFF AAI+AMR+ R VL+G + AL +MT LS + G+ A
Sbjct: 94 IHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFGY-ATT 152
Query: 65 LISRKLTHHITTVLFFGFGLWSLWDAF---SDGGEAEEFEEVE---KKLDADFKA----N 114
+I R T++++T LF FG+ L + D G+ EE EEV+ KK D +F+ N
Sbjct: 153 VIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQ-EELEEVQAELKKKDEEFQRTKLLN 211
Query: 115 AGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPF 174
+ G+ KK L F SPIF++A ++TF EWGD+SQL TI LAA E+P+
Sbjct: 212 GPDVETGTSTAIPQKK-----WLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPY 266
Query: 175 GVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS-FLSP 226
GV +GG +G LCT AVIGG+ +A +IS + V + GG++F+ F + F+SP
Sbjct: 267 GVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1
Length = 287
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 131/230 (56%), Gaps = 17/230 (7%)
Query: 11 SLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRKL 70
S++M EIGDKTF AA+LA + R V +G AL +MT+L ++G AP L RKL
Sbjct: 53 SISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKL 112
Query: 71 THHITTVLFFGFGLWSLWDA--FSDGGEA--EEFEEVEKKLDA----DFKANAGA----- 117
T + VLF FG+ L +A D E+ +EF+ V ++ A D GA
Sbjct: 113 TDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHY 172
Query: 118 ----TKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENP 173
++ G +LK + R + FSP+F+KAF++TF EWGD+SQ+ATI +AA +N
Sbjct: 173 TGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNV 232
Query: 174 FGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSF 223
+GV +G +G A CT AVI GK ++++I V GG+LFI FG+ F
Sbjct: 233 YGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYF 282
Score = 36.2 bits (82), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 103 VEKKLDADFKANAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQL 162
V KK+ + A+ A K +E+ R FL S IF + S+ F E GDK+ +
Sbjct: 18 VAKKIVGEGMADVSAIKH----PEEVHPTNRDFLR---SLIF--SISMIFGCEIGDKTFI 68
Query: 163 ATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQS 222
LA + + V G + T V+ G + K+ + GGVLF++FGI+
Sbjct: 69 VAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKM 128
Query: 223 FL 224
+
Sbjct: 129 LM 130
>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0615 PE=3 SV=1
Length = 206
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 130/226 (57%), Gaps = 23/226 (10%)
Query: 4 VVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAP 63
++ FT L + +SE+GDKTFF A ILAMR+PRR VL G +G L MTILS ++G +
Sbjct: 1 MLTAFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFT 60
Query: 64 NLISRKLTHHITTVLFFGFGLWSLWDAFSDGGEA--EEFEEVEKKLDADFKANAGATKEG 121
L +R + ++ LF FG LWDA A EE E+ EK +
Sbjct: 61 FLPTRYI-NYAEVALFLIFGTKLLWDARRIKATANLEEMEDAEKAI-------------- 105
Query: 122 SKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGI 181
+ + +LK R + I +++F++TF EWGD++Q+ATI LAA N +GV G I
Sbjct: 106 ASGEKKLKIVPRGW------GIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAI 159
Query: 182 IGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPV 227
+G +C AV+GGK +A +ISEK V L GG+LF +F + S+ + +
Sbjct: 160 LGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWWTKI 205
>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana
GN=At4g13590 PE=1 SV=2
Length = 359
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 125/222 (56%), Gaps = 16/222 (7%)
Query: 7 GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLI 66
GFT + ++ +SEIGDKTFF AA+LAM++ + LVL G +GAL +MTILS V+G + ++
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVP 204
Query: 67 SR-----KLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEG 121
++ + + L FGL S+ DA+ + VE K + G E
Sbjct: 205 AQFQTTLPIGEYAAIALLMFFGLKSIKDAW-------DLPPVEAKNGEETGIELGEYSEA 257
Query: 122 SKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGGI 181
+EL K++ L I K+FS+ FF EWGD+S LAT+ L A ++P GV G I
Sbjct: 258 ----EELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAI 313
Query: 182 IGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSF 223
G + T A++GG LA+ ISEK+V GG LF+VF +F
Sbjct: 314 AGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATF 355
Score = 34.3 bits (77), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 10 KSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLISRK 69
KS ++ +E GD++ A L V SG + +V T+L+ + G N IS K
Sbjct: 278 KSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEK 337
Query: 70 LTHHITTVLFFGFGLWSLWDAF 91
L ++ LF F + + F
Sbjct: 338 LVGYVGGALFLVFAAATFFGVF 359
>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os11g0544500 PE=2 SV=1
Length = 347
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 130/223 (58%), Gaps = 19/223 (8%)
Query: 7 GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNLI 66
GFT + + +SEIGDKTFF AA+LAM++ R LVL G + AL +MTI+S ++G + ++
Sbjct: 134 GFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSVP 193
Query: 67 SR-----KLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEG 121
++ + + L FG S+ DA+ ++ + + + N ++ G
Sbjct: 194 AQFQTTLPIGEYAAIALLAFFGFKSIKDAW----------QLPDNANGNLQGN---SESG 240
Query: 122 SKAD-DELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG 180
A+ +EL K++ L + K+FS+ FF EWGD+S LATI L A ++PFGV G
Sbjct: 241 ELAEAEELVKEKVAKKLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGA 300
Query: 181 IIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSF 223
I G + T A++GG LA+ +SEK+V L GGVLF++F + +F
Sbjct: 301 IAGHLVATFLAIVGGAFLANYLSEKLVGLIGGVLFLLFAVATF 343
>sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1
Length = 280
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 127/239 (53%), Gaps = 23/239 (9%)
Query: 2 SSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWV 61
SS ++ F S++M LSEIGDKTF AA++AMRH R LV S +L +MTILS VVG
Sbjct: 36 SSHLKSFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHS 95
Query: 62 APNLISRKLTHHITTVLFFGFGLWSLWDAFSDGGEA-------------------EEFEE 102
A +S + T +LF FG + +A ++ ++
Sbjct: 96 AVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEEEMAEVEEEIAIKDMNQDMDD 155
Query: 103 VEKKLDADFKANAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQL 162
VEK D + G K ++ + F+ FSP++++ F + F GE GD+SQ+
Sbjct: 156 VEKGGDTAYDKQLKNASIGKKIVHRIR-ELASFM---FSPVWVQIFLMVFLGELGDRSQI 211
Query: 163 ATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQ 221
+ I +A D + + V+ G +IG A+C+ AV+GGK LA++IS + + L+ +LF +F +
Sbjct: 212 SIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFALM 270
>sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPAC186.05c PE=3 SV=1
Length = 262
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 16/232 (6%)
Query: 5 VQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPN 64
VQ S++M + E+GDK+F A+LA ++ R V G AL MT + +VG AP
Sbjct: 24 VQNIGMSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPF 83
Query: 65 LISRKLTHHITTVLFFGFGLWSLWDAF----SDGGEAEEFEEVEKKL--DADFKAN---- 114
L + +TH + LF FG+ L ++ S EF++VEK + + D K
Sbjct: 84 LFPKSITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELG 143
Query: 115 -AGATKEGSKADDELKKQR-----RPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLA 168
+ + S D+ K + + FS F+KAF++ F E GD+SQ+ATI ++
Sbjct: 144 LPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMS 203
Query: 169 ADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGI 220
A E V +G IG LCT AVI G+ ++++I V GG++F++FGI
Sbjct: 204 AKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGI 255
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 155 EWGDKSQLATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVL 214
E GDKS + T LA V G + T+ AV+ G++ + I + GG L
Sbjct: 38 ELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFPKSITHILGGTL 97
Query: 215 FIVFGIQ 221
F++FG++
Sbjct: 98 FLIFGVK 104
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 6 QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGWVAPNL 65
+ F K+ A+ +SE+GD++ A +++ + V G ++ T+++ +VG N
Sbjct: 177 RAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNK 236
Query: 66 ISRKLTHHITTVLFFG------FGLWSLWDAF 91
I + VLFFG FG+ ++ F
Sbjct: 237 I------EMYKVLFFGGIVFMIFGILYIFQGF 262
>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana
GN=At1g64150 PE=2 SV=2
Length = 370
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 47/238 (19%)
Query: 1 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
+ + GF + + SE+GDKTFF AA+LA R+ V G GAL +MTI+S V+G
Sbjct: 152 LGDISSGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLG- 210
Query: 61 VAPNLISRKLTHHITTVLFFGFG-------------------LWSLWDAFSDGGEAEEFE 101
+ H++ VL F FG + +L DA SD G+A+E E
Sbjct: 211 --------RTFHYVDEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEGKADE-E 261
Query: 102 EVEKKLDADFKANAGATKEGSKADDELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQ 161
+ E +L + GA + + + F++ F EWGDKS
Sbjct: 262 QKEAELAVSELSGNGAGIVAA------------------ANTIISTFALVFVAEWGDKSF 303
Query: 162 LATIGLAADENPFGVVLGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFG 219
+TI LAA +P GV+ G + G T AV+GG L + +SEK +A GGVLF+VF
Sbjct: 304 FSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVGGVLFLVFA 361
>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica
GN=OsI_00941 PE=3 SV=2
Length = 341
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 1 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
+ + GF + + SE+GD+TFF AA+LA R+ ++ G GAL VMTI+S V+G
Sbjct: 121 LGDISTGFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLG- 179
Query: 61 VAPNLISRKLTHHITTVLFFGFGLWSL-WDAFSDGGEAEEFEEVEKKLDADFKANAGATK 119
+ H++ ++ F FG D F + V LDA +
Sbjct: 180 --------RAFHYVDGIIPFSFGGTDFPVDDFL-AACLLVYYGVTTLLDAASGDEEKMNE 230
Query: 120 EGSKADDELKK--QRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVV 177
E +A+ + K ++ S I F + F EWGDKS +TI LAA +P GV+
Sbjct: 231 EQEEAELAVSKFLGNGAGIISAASTI-ASTFVLVFIAEWGDKSFFSTIALAAASSPLGVI 289
Query: 178 LGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPVKS 229
G + G A+ T AV+GG L + +SEKIVA GG LF+ F + + V S
Sbjct: 290 AGSLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFAAVTLVEIVNS 341
>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0221700 PE=3 SV=2
Length = 341
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 1 MSSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
+ + GF + + SE+GD+TFF AA+LA R+ ++ G GAL VMTI+S V+G
Sbjct: 121 LGDISTGFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLG- 179
Query: 61 VAPNLISRKLTHHITTVLFFGFGLWSL-WDAFSDGGEAEEFEEVEKKLDADFKANAGATK 119
+ H++ ++ F FG D F + + LDA +
Sbjct: 180 --------RAFHYVDGIIPFSFGGTDFPVDDFL-AACLLVYYGITTLLDAASGDEEKMNE 230
Query: 120 EGSKADDELKK--QRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVV 177
E +A+ + K ++ S I F + F EWGDKS +TI LAA +P GV+
Sbjct: 231 EQEEAELAVSKFLGNGAGIISAASTI-ASTFVLVFIAEWGDKSFFSTIALAAASSPLGVI 289
Query: 178 LGGIIGQALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSPVKS 229
G + G A+ T AV+GG L + +SEKIVA GG LF+ F + + V S
Sbjct: 290 AGSLAGHAVATLIAVLGGSLLGTFLSEKIVAYIGGSLFLAFAAVTLVEIVNS 341
>sp|B6H768|UTP25_PENCW U3 small nucleolar RNA-associated protein 25 OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=utp25 PE=3 SV=1
Length = 715
Score = 33.1 bits (74), Expect = 1.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 92 SDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDELKKQRRPF--LLQFFSP 142
S GGE + E+ +++LD D + EGS +D+E + RP+ LLQ P
Sbjct: 50 SSGGEDDASEQSQEELDDDTLMD-----EGSSSDEEDENTERPYNELLQLLQP 97
>sp|Q8DRA5|DPO3_STRR6 DNA polymerase III PolC-type OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=polC PE=3 SV=1
Length = 1463
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 66 ISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKAD 125
I R + H I+ V F F FS+ E F E++K L +F +K G+KA
Sbjct: 29 IERVVVHKISKVWEFHF-------VFSNILPIEIFLELKKGLSEEF------SKTGNKAV 75
Query: 126 DELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADEN 172
E+K + + F Q + +AFS G KS + + A+ N
Sbjct: 76 FEIKARSQEFSNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGN 122
>sp|Q97SQ2|DPO3_STRPN DNA polymerase III PolC-type OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=polC PE=3 SV=1
Length = 1463
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 66 ISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKAD 125
I R + H I+ V F F FS+ E F E++K L +F +K G+KA
Sbjct: 29 IERVVVHKISKVWEFHF-------VFSNILPIEIFLELKKGLSEEF------SKTGNKAV 75
Query: 126 DELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADEN 172
E+K + + F Q + +AFS G KS + + A+ N
Sbjct: 76 FEIKARSQEFSNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGN 122
>sp|Q04MH6|DPO3_STRP2 DNA polymerase III PolC-type OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=polC PE=3 SV=1
Length = 1463
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 66 ISRKLTHHITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKAD 125
I R + H I+ V F F FS+ E F E++K L +F +K G+KA
Sbjct: 29 IERVVVHKISKVWEFHF-------VFSNILPIEIFLELKKGLSEEF------SKTGNKAV 75
Query: 126 DELKKQRRPFLLQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADEN 172
E+K + + F Q + +AFS G KS + + A+ N
Sbjct: 76 FEIKARSQEFSNQLLQSYYREAFSEGPCASQGFKSLYQNLQVRAEGN 122
>sp|Q21MU7|GCP_SACD2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 /
DSM 17024) GN=gcp PE=3 SV=1
Length = 341
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 73 HITTVLFFGFGLWSLWDAFSDGGEAEEFEEVEKKLDADFKANAGATKEGSKADDELKKQR 132
H V G G + L D E F++ K +D D+ K +K D K
Sbjct: 138 HTQLVEVQGIGKYVLLGESLDDAAGEAFDKAAKMMDLDYPGGPNIAKLATKGDVSRFKFP 197
Query: 133 RPFLLQF---FSPIFLKAFSITFFGEWGDKSQLATIGLAAD 170
RP + FS LK F++ ++ D++ L AD
Sbjct: 198 RPMTDRPGLDFSFSGLKTFTLNTVAKYADETGLPDDQTCAD 238
>sp|Q98PL1|HPRK_MYCPU HPr kinase/phosphorylase OS=Mycoplasma pulmonis (strain UAB CTIP)
GN=hprK PE=3 SV=1
Length = 309
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 2 SSVVQGFTKSLAMTVLSEIGDKTFFAAAI-LAMRHPRRLVLSGCLGALIVMTILSAVVGW 60
SS+ + F++ + M VLS+ DK +++ I +A +H ++ ++ ++ ++G
Sbjct: 77 SSIEEIFSRKIPMLVLSKGFDKNYYSTIIEIANKHKTPVIFYKA-----SLSEINTILGI 131
Query: 61 VAPNLISRKLTHHITTVLFFGFGLWSLWDA 90
++K+ H T V FG G+ + D+
Sbjct: 132 YLLQYFAKKVQVHGTLVSVFGMGILIVGDS 161
>sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1
Length = 582
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 54 LSAVVGWVAPNLISRK---LTHHI----TTVLFFGF---GLWSLWDAFSDGGEAEEFEEV 103
++AV WV+ ++S LTH + T +LF GF GL+ +W + + +FEEV
Sbjct: 498 IAAVSNWVSNLIVSESFLSLTHALGSSGTFLLFAGFSTIGLFFIWLLVPET-KGLQFEEV 556
Query: 104 EKKLDADFKANAGATKE 120
EK L+ FK + +E
Sbjct: 557 EKLLEVGFKPSLLRRRE 573
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,129,504
Number of Sequences: 539616
Number of extensions: 3236004
Number of successful extensions: 9341
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9256
Number of HSP's gapped (non-prelim): 50
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)