BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027039
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0PQX0|PHMT1_MYCUA Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 1
OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_2377
PE=3 SV=1
Length = 271
Score = 37.7 bits (86), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 99 KVLCVSAGAGHEVMAFN-SIGVADVTGVEL----------MDSLPLVS--RADPHNLPFF 145
+VL VS G G ++ A TG++L +LP + R D NLPF
Sbjct: 83 RVLEVSCGHGGGASYLTRTLHPASYTGLDLNRAGIKLCQRRHNLPGLDFVRGDAENLPFE 142
Query: 146 DEAFDVAFTAHLAEALFP--SRFVGEMERTVKIGGVCM 181
DE+FDV A +P SRF+ E+ R ++ GG +
Sbjct: 143 DESFDVVLKVE-ASHCYPHFSRFLAEVVRVLRPGGYLL 179
>sp|Q50464|PHMT_MYCTU Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium tuberculosis GN=Rv2952 PE=1 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 99 KVLCVSAGAGHEVMAFN-SIGVADVTGVELMDS----------LPLVS--RADPHNLPFF 145
+VL VS G G ++ A TG++L + LP + R D NLPF
Sbjct: 83 QVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLCKKRHRLPGLDFVRGDAENLPFD 142
Query: 146 DEAFDVAFTAHLAEALFP--SRFVGEMERTVKIGG 178
DE+FDV A +P RF+ E+ R ++ GG
Sbjct: 143 DESFDVVLNVE-ASHCYPHFRRFLAEVVRVLRPGG 176
>sp|A5U6W0|PHMT_MYCTA Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium tuberculosis (strain ATCC 25177 /
H37Ra) GN=MRA_2979 PE=3 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 99 KVLCVSAGAGHEVMAFN-SIGVADVTGVELMDS----------LPLVS--RADPHNLPFF 145
+VL VS G G ++ A TG++L + LP + R D NLPF
Sbjct: 83 QVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLCKKRHRLPGLDFVRGDAENLPFD 142
Query: 146 DEAFDVAFTAHLAEALFP--SRFVGEMERTVKIGG 178
DE+FDV A +P RF+ E+ R ++ GG
Sbjct: 143 DESFDVVLNVE-ASHCYPHFRRFLAEVVRVLRPGG 176
>sp|A1KMU6|PHMT_MYCBP Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2)
GN=BCG_2973 PE=3 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 99 KVLCVSAGAGHEVMAFN-SIGVADVTGVELMDS----------LPLVS--RADPHNLPFF 145
+VL VS G G ++ A TG++L + LP + R D NLPF
Sbjct: 83 QVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLCKKRHRLPGLDFVRGDAENLPFD 142
Query: 146 DEAFDVAFTAHLAEALFP--SRFVGEMERTVKIGG 178
DE+FDV A +P RF+ E+ R ++ GG
Sbjct: 143 DESFDVVLNVE-ASHCYPHFRRFLAEVVRVLRPGG 176
>sp|Q7TXK3|PHMT_MYCBO Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=Mb2976 PE=3 SV=1
Length = 270
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 99 KVLCVSAGAGHEVMAFN-SIGVADVTGVELMDS----------LPLVS--RADPHNLPFF 145
+VL VS G G ++ A TG++L + LP + R D NLPF
Sbjct: 83 QVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLCKKRHRLPGLDFVRGDAENLPFD 142
Query: 146 DEAFDVAFTAHLAEALFP--SRFVGEMERTVKIGG 178
DE+FDV A +P RF+ E+ R ++ GG
Sbjct: 143 DESFDVVLNVE-ASHCYPHFRRFLAEVVRVLRPGG 176
>sp|O69492|Y2584_MYCLE Uncharacterized methyltransferase ML2584 OS=Mycobacterium leprae
(strain TN) GN=ML2584 PE=3 SV=1
Length = 269
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 100 VLCVSAGAGHEVMAFNSIGVADV-----------TGVELMDSLPLVSRADPHNLPFFDEA 148
+L V +G+G+ AF GV + G L+ RA LPF D+A
Sbjct: 76 LLDVGSGSGYFAAAFADAGVRYIGVEPDPREMHAAGPALVPKAGAFVRASGMALPFADDA 135
Query: 149 FDVAFTAHLAEALF-PSRFVGEMERTVKIGGVCMV 182
D+ ++++AE + P + EM R K GG+ ++
Sbjct: 136 VDICLSSNVAEHVPQPWQLGNEMLRVTKPGGLVVL 170
>sp|B8ZTF7|Y2584_MYCLB Uncharacterized methyltransferase MLBr02584 OS=Mycobacterium leprae
(strain Br4923) GN=MLBr02584 PE=3 SV=1
Length = 269
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 100 VLCVSAGAGHEVMAFNSIGVADV-----------TGVELMDSLPLVSRADPHNLPFFDEA 148
+L V +G+G+ AF GV + G L+ RA LPF D+A
Sbjct: 76 LLDVGSGSGYFAAAFADAGVRYIGVEPDPREMHAAGPALVPKAGAFVRASGMALPFADDA 135
Query: 149 FDVAFTAHLAEALF-PSRFVGEMERTVKIGGVCMV 182
D+ ++++AE + P + EM R K GG+ ++
Sbjct: 136 VDICLSSNVAEHVPQPWQLGNEMLRVTKPGGLVVL 170
>sp|P75672|YAFS_ECOLI Uncharacterized protein YafS OS=Escherichia coli (strain K12)
GN=yafS PE=4 SV=2
Length = 240
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 130 SLPLVSRADPHNLPFFDEAFDVAFTAH-LAEALFPSRFVGEMERTVKIGGVCMV 182
+P+ +ADP +LPF D++ DV AH L P R + E +R + G ++
Sbjct: 72 GMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVI 125
>sp|Q9CD86|PHMT_MYCLE Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium leprae (strain TN) GN=ML0130 PE=3 SV=1
Length = 270
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 136 RADPHNLPFFDEAFDVAFTAHLAEAL--FPSRFVGEMERTVKIGG 178
R D NLPF +E+FDV + FP RF+ E+ R ++ GG
Sbjct: 133 RGDAENLPFDNESFDVVINIEASHCYPHFP-RFLAEVVRVLRPGG 176
>sp|Q8PB55|LEPA_XANCP Elongation factor 4 OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=lepA PE=3
SV=1
Length = 601
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFD 146
HL K +F + V+ GAG EV N+ + DV G + D+L L + PH LP F
Sbjct: 237 HLVDKVGVFTPKRKELVALGAG-EVGWINA-SIKDVHGAPVGDTLTLAADPAPHALPGFQ 294
Query: 147 EAFDVAFTAHLAEALFP 163
E F LFP
Sbjct: 295 EMQPRVFA-----GLFP 306
>sp|B0RX30|LEPA_XANCB Elongation factor 4 OS=Xanthomonas campestris pv. campestris
(strain B100) GN=lepA PE=3 SV=1
Length = 601
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFD 146
HL K +F + V+ GAG EV N+ + DV G + D+L L + PH LP F
Sbjct: 237 HLVDKVGVFTPKRKELVALGAG-EVGWINA-SIKDVHGAPVGDTLTLAADPAPHALPGFQ 294
Query: 147 E 147
E
Sbjct: 295 E 295
>sp|Q4USF4|LEPA_XANC8 Elongation factor 4 OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=lepA PE=3 SV=1
Length = 601
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFD 146
HL K +F + V+ GAG EV N+ + DV G + D+L L + PH LP F
Sbjct: 237 HLVDKVGVFTPKRKELVALGAG-EVGWINA-SIKDVHGAPVGDTLTLAADPAPHALPGFQ 294
Query: 147 E 147
E
Sbjct: 295 E 295
>sp|Q5YPB0|UBIE_NOCFA Demethylmenaquinone methyltransferase OS=Nocardia farcinica (strain
IFM 10152) GN=ubiE PE=3 SV=1
Length = 237
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 83 HFFKHLQGKSL-LFNHSKVLCVSAGAGHEVMAFNSIGV----ADVTGVELMDS----LPL 133
+++ K+L L +VL ++AG G + F G AD + L +P+
Sbjct: 45 RYWRWATRKALALRPGERVLDLAAGTGVSTVEFAKSGAWCVAADFSKGMLAAGSFREVPM 104
Query: 134 VSRADPHNLPFFDEAFD-VAFTAHLAEALFPSRFVGEMERTVKIGGVCMV 182
V+ D LPF DE+FD VA + L P + EM R K GG ++
Sbjct: 105 VA-GDAMALPFADESFDAVAISYGLRNVADPDLAMREMLRVTKPGGRLVI 153
>sp|Q6DCD0|STRBP_XENLA Spermatid perinuclear RNA-binding protein OS=Xenopus laevis
GN=strbp PE=2 SV=1
Length = 686
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 133 LVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKI-------GGVCMVLME 185
L+S++ P + P F + DV T H EA PS+ ++ TVK+ G L
Sbjct: 406 LLSQSGPVHAPVFTMSVDVDGTTH--EASGPSKKTAKLYVTVKVLQAMGYPTGFDTDL-- 461
Query: 186 ECAGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRTRLPV 229
EC + K E + F ++N+T N + L RT+ P+
Sbjct: 462 ECLSSDEKSDSEGKNETSFSSSSNITGNSNADNNTLEVRTQGPI 505
>sp|Q6B0K9|HBM_HUMAN Hemoglobin subunit mu OS=Homo sapiens GN=HBM PE=2 SV=1
Length = 141
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 84 FFKHL---QGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPH 140
+F HL Q + L +H + + + GA A + L D LV R DP
Sbjct: 42 YFPHLSACQDATQLLSHGQRMLAAVGA-----AVQHVDNLRAALSPLADLHALVLRVDPA 96
Query: 141 NLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVK--IGGVCMVLMEE 186
N P + F V +HL + F +M+ + GV +VL E+
Sbjct: 97 NFPLLIQCFHVVLASHLQD-----EFTVQMQAAWDKFLTGVAVVLTEK 139
>sp|A1R990|UBIE_ARTAT Demethylmenaquinone methyltransferase OS=Arthrobacter aurescens
(strain TC1) GN=ubiE PE=3 SV=1
Length = 253
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 99 KVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSR----------ADPHNLPFFDEA 148
KVL ++AG G + GV DV + + V + D NLPF D +
Sbjct: 54 KVLDLAAGTGTSSEPYADAGV-DVVACDFSLGMLKVGKRRRPDIDFIAGDATNLPFADNS 112
Query: 149 FDVA-FTAHLAEALFPSRFVGEMERTVKIGGVCMV 182
FD + + L + P + + EM R K GG ++
Sbjct: 113 FDASTISFGLRNVVEPRKALEEMLRVTKPGGRLVI 147
>sp|Q2T139|UBIE_BURTA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=ubiE PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|Q63XA0|UBIE_BURPS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain K96243) GN=ubiE
PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|A3N5U8|UBIE_BURP6 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 668) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|Q3JVZ6|UBIE_BURP1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1710b) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|A3NRJ4|UBIE_BURP0 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1106a) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|A1V753|UBIE_BURMS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain SAVP1) GN=ubiE PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|Q62MP4|UBIE_BURMA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain ATCC 23344) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|A2S8L1|UBIE_BURM9 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain NCTC 10229) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|A3MNT8|UBIE_BURM7 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain NCTC 10247) GN=ubiE PE=3
SV=1
Length = 243
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 17/119 (14%)
Query: 98 SKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSLPLVSR--------------ADPHN 141
KVL ++AG G AF +V ++ +S+ V R D
Sbjct: 60 GKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRLLDKGVVTPSLLCDAEK 119
Query: 142 LPFFDEAFDVAFTA-HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199
LPF D FDV A L + EM R K GG MVL +K+ +++
Sbjct: 120 LPFPDNYFDVVTVAFGLRNMTHKDSALAEMRRVAKPGGRVMVLEFSKVWEPLKKAYDVY 178
>sp|Q21JL7|CMOB_SACD2 tRNA (mo5U34)-methyltransferase OS=Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024) GN=cmoB PE=3 SV=1
Length = 325
Score = 30.4 bits (67), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 23/104 (22%)
Query: 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVEL--------------------MDSLPLV 134
H K+L V G G+ G + V G++ +D LP+
Sbjct: 121 LKHRKILDVGCGNGYHCWRMYGEGASQVIGIDPSPRFVVQFYMLKHFIGSNAPVDLLPVP 180
Query: 135 SRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGG 178
A P NL FD F + H P + E++ T++ GG
Sbjct: 181 MEAVPANLQAFDTTFSMGVLYHRRS---PMDHLRELKATLRPGG 221
>sp|Q90592|GTR2_CHICK Solute carrier family 2, facilitated glucose transporter member 2
OS=Gallus gallus GN=SLC2A2 PE=2 SV=1
Length = 533
Score = 30.4 bits (67), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 37 LENSPKSTKFPKSSCD--------SSHRQHLPLEKKNH--RLWSSKSWKQQVTS--YAHF 84
+E + KS K + +CD +Q EK+ +L+SS ++Q V
Sbjct: 265 VEEAKKSLKRLRGNCDPMKEIAEMEKEKQEAASEKRVSIGQLFSSSKYRQAVIVALMVQI 324
Query: 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNL 142
+ G + +F +S + AG G V A +IGV V V + S+ LV +A +L
Sbjct: 325 SQQFSGINAIFYYSTNIFQRAGVGQPVYA--TIGVGVVNTVFTVISVFLVEKAGRRSL 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,071,298
Number of Sequences: 539616
Number of extensions: 2945767
Number of successful extensions: 8052
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 8049
Number of HSP's gapped (non-prelim): 33
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)