Query 027039
Match_columns 229
No_of_seqs 222 out of 2597
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:09:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.7 1.1E-17 3.9E-22 139.2 10.2 91 95-186 38-137 (257)
2 3dh0_A SAM dependent methyltra 99.7 1.6E-16 5.6E-21 127.8 16.2 132 93-225 34-193 (219)
3 3h2b_A SAM-dependent methyltra 99.7 5.9E-17 2E-21 129.1 13.0 129 97-227 42-196 (203)
4 2zfu_A Nucleomethylin, cerebra 99.7 2.8E-16 9.7E-21 126.3 14.7 126 95-225 66-191 (215)
5 3dlc_A Putative S-adenosyl-L-m 99.7 5E-17 1.7E-21 130.2 10.2 122 93-215 41-206 (219)
6 1vl5_A Unknown conserved prote 99.7 2.4E-16 8.3E-21 130.4 13.5 91 93-184 34-140 (260)
7 3l8d_A Methyltransferase; stru 99.7 2.9E-16 1E-20 128.1 13.5 117 95-212 52-200 (242)
8 3kkz_A Uncharacterized protein 99.7 4.8E-16 1.6E-20 129.2 14.8 120 93-212 43-196 (267)
9 3g5l_A Putative S-adenosylmeth 99.7 5.3E-16 1.8E-20 127.7 14.2 117 94-210 42-214 (253)
10 2p7i_A Hypothetical protein; p 99.7 2.4E-16 8.1E-21 128.6 11.8 113 95-209 41-196 (250)
11 1nkv_A Hypothetical protein YJ 99.7 3.4E-16 1.2E-20 128.9 12.7 117 92-210 32-185 (256)
12 3hnr_A Probable methyltransfer 99.7 1.1E-15 3.7E-20 123.1 15.3 130 79-215 32-203 (220)
13 3ujc_A Phosphoethanolamine N-m 99.7 5.9E-16 2E-20 127.8 13.8 124 85-209 44-203 (266)
14 3vc1_A Geranyl diphosphate 2-C 99.7 7.3E-16 2.5E-20 131.2 14.5 116 94-210 115-267 (312)
15 3f4k_A Putative methyltransfer 99.7 7.5E-16 2.6E-20 126.9 13.9 120 93-212 43-196 (257)
16 2a14_A Indolethylamine N-methy 99.7 5.2E-16 1.8E-20 129.2 12.6 117 94-210 53-236 (263)
17 1pjz_A Thiopurine S-methyltran 99.7 2.1E-16 7.3E-21 126.7 9.9 111 93-205 19-169 (203)
18 1xxl_A YCGJ protein; structura 99.7 1.3E-15 4.3E-20 124.8 14.6 115 93-208 18-170 (239)
19 3bus_A REBM, methyltransferase 99.7 9.3E-16 3.2E-20 127.5 14.0 125 83-208 48-212 (273)
20 3e23_A Uncharacterized protein 99.7 5.1E-16 1.8E-20 124.4 11.4 115 94-210 41-180 (211)
21 2o57_A Putative sarcosine dime 99.7 1E-15 3.5E-20 129.0 13.4 116 93-209 79-231 (297)
22 4htf_A S-adenosylmethionine-de 99.7 1.4E-15 4.7E-20 127.5 14.1 114 95-209 67-229 (285)
23 3cgg_A SAM-dependent methyltra 99.7 2.1E-15 7.1E-20 118.4 14.2 116 94-210 44-173 (195)
24 3sm3_A SAM-dependent methyltra 99.7 3E-15 1E-19 121.2 15.3 115 95-210 29-205 (235)
25 2p35_A Trans-aconitate 2-methy 99.7 6.4E-16 2.2E-20 127.3 11.4 98 87-185 24-133 (259)
26 3i9f_A Putative type 11 methyl 99.7 1.3E-15 4.4E-20 117.9 12.4 126 94-226 15-161 (170)
27 3ccf_A Cyclopropane-fatty-acyl 99.6 3.4E-16 1.2E-20 131.0 8.7 91 94-186 55-156 (279)
28 3ou2_A SAM-dependent methyltra 99.6 6.6E-15 2.2E-19 118.0 15.8 119 94-215 44-207 (218)
29 3ege_A Putative methyltransfer 99.6 8.3E-16 2.8E-20 127.6 10.5 92 93-186 31-132 (261)
30 3mgg_A Methyltransferase; NYSG 99.6 1E-15 3.5E-20 127.6 10.9 95 91-185 32-143 (276)
31 4e2x_A TCAB9; kijanose, tetron 99.6 3.3E-16 1.1E-20 138.4 8.4 139 84-223 95-266 (416)
32 4gek_A TRNA (CMO5U34)-methyltr 99.6 7.4E-16 2.5E-20 128.5 9.9 91 91-183 65-177 (261)
33 3dtn_A Putative methyltransfer 99.6 4.9E-15 1.7E-19 120.4 14.5 118 94-212 42-214 (234)
34 3dli_A Methyltransferase; PSI- 99.6 4.6E-16 1.6E-20 127.3 8.4 117 93-210 38-182 (240)
35 3pfg_A N-methyltransferase; N, 99.6 6.3E-15 2.2E-19 122.0 14.7 87 95-183 49-150 (263)
36 2yqz_A Hypothetical protein TT 99.6 6.1E-15 2.1E-19 121.6 13.7 93 93-186 36-143 (263)
37 3bkw_A MLL3908 protein, S-aden 99.6 3.6E-15 1.2E-19 121.6 11.8 117 95-211 42-213 (243)
38 1xtp_A LMAJ004091AAA; SGPP, st 99.6 1.7E-15 5.8E-20 124.4 9.6 124 89-212 86-238 (254)
39 2ex4_A Adrenal gland protein A 99.6 2.9E-15 9.9E-20 122.6 10.4 118 95-212 78-225 (241)
40 3cc8_A Putative methyltransfer 99.6 9.5E-15 3.2E-19 117.7 13.1 115 95-210 31-183 (230)
41 3q87_B N6 adenine specific DNA 99.6 9.3E-15 3.2E-19 113.9 12.4 127 95-227 22-164 (170)
42 3jwg_A HEN1, methyltransferase 99.6 9E-15 3.1E-19 117.8 12.7 89 95-183 28-140 (219)
43 4fsd_A Arsenic methyltransfera 99.6 4.8E-15 1.6E-19 129.9 11.8 117 94-210 81-249 (383)
44 2gb4_A Thiopurine S-methyltran 99.6 4.7E-15 1.6E-19 123.0 11.0 106 95-201 67-217 (252)
45 2avn_A Ubiquinone/menaquinone 99.6 5.7E-15 1.9E-19 122.4 11.4 91 95-186 53-154 (260)
46 2g72_A Phenylethanolamine N-me 99.6 5.8E-15 2E-19 124.1 11.5 116 95-210 70-254 (289)
47 1ri5_A MRNA capping enzyme; me 99.6 8.8E-15 3E-19 122.8 12.4 94 93-186 61-176 (298)
48 2gs9_A Hypothetical protein TT 99.6 1.1E-14 3.9E-19 116.4 12.3 89 95-186 35-134 (211)
49 3ocj_A Putative exported prote 99.6 6.9E-15 2.4E-19 124.7 11.6 131 93-224 115-303 (305)
50 1y8c_A S-adenosylmethionine-de 99.6 2.9E-14 9.8E-19 116.1 14.8 88 95-184 36-142 (246)
51 2xvm_A Tellurite resistance pr 99.6 9E-15 3.1E-19 115.5 11.4 113 95-209 31-172 (199)
52 2plw_A Ribosomal RNA methyltra 99.6 4.7E-14 1.6E-18 112.0 15.3 115 93-210 19-177 (201)
53 3bxo_A N,N-dimethyltransferase 99.6 2.3E-14 7.9E-19 116.5 13.7 127 95-224 39-238 (239)
54 4df3_A Fibrillarin-like rRNA/T 99.6 1.2E-14 4E-19 119.0 11.8 124 90-214 71-219 (233)
55 1ve3_A Hypothetical protein PH 99.6 3.5E-14 1.2E-18 114.5 14.5 91 95-186 37-144 (227)
56 3lcc_A Putative methyl chlorid 99.6 1.5E-14 5E-19 117.9 12.4 114 96-211 66-206 (235)
57 1jsx_A Glucose-inhibited divis 99.6 1.8E-14 6.3E-19 114.9 12.5 123 96-225 65-205 (207)
58 3g07_A 7SK snRNA methylphospha 99.6 6.3E-15 2.1E-19 124.5 10.0 132 95-226 45-288 (292)
59 3g89_A Ribosomal RNA small sub 99.6 4.7E-15 1.6E-19 122.7 9.0 127 95-224 79-228 (249)
60 1xdz_A Methyltransferase GIDB; 99.6 7.3E-15 2.5E-19 120.5 9.9 128 95-225 69-219 (240)
61 1kpg_A CFA synthase;, cyclopro 99.6 3E-14 1E-18 119.4 13.9 100 83-186 51-170 (287)
62 2kw5_A SLR1183 protein; struct 99.6 1.8E-14 6E-19 114.6 11.8 116 95-212 29-173 (202)
63 2i62_A Nicotinamide N-methyltr 99.6 2.7E-14 9.1E-19 117.8 13.3 119 93-211 53-238 (265)
64 3jwh_A HEN1; methyltransferase 99.6 2.4E-14 8.3E-19 115.2 12.6 89 95-183 28-140 (217)
65 3ofk_A Nodulation protein S; N 99.6 7.8E-15 2.7E-19 117.8 9.6 91 93-185 48-155 (216)
66 3g5t_A Trans-aconitate 3-methy 99.6 1.1E-14 3.7E-19 123.1 10.7 89 95-183 35-148 (299)
67 3gu3_A Methyltransferase; alph 99.6 2.4E-14 8.2E-19 120.2 12.7 93 93-186 19-128 (284)
68 2pxx_A Uncharacterized protein 99.6 4.6E-14 1.6E-18 112.6 13.5 93 94-186 40-161 (215)
69 2p8j_A S-adenosylmethionine-de 99.6 2.8E-14 9.6E-19 113.8 12.1 115 95-210 22-181 (209)
70 3grz_A L11 mtase, ribosomal pr 99.6 6.8E-14 2.3E-18 111.6 14.3 125 94-226 58-197 (205)
71 1vlm_A SAM-dependent methyltra 99.6 6.8E-14 2.3E-18 112.9 14.1 113 95-212 46-188 (219)
72 3e8s_A Putative SAM dependent 99.6 2.1E-14 7E-19 115.5 10.7 116 95-211 51-208 (227)
73 1nt2_A Fibrillarin-like PRE-rR 99.6 1.7E-14 6E-19 116.3 10.2 117 93-212 54-195 (210)
74 3e05_A Precorrin-6Y C5,15-meth 99.5 7E-14 2.4E-18 111.5 13.3 108 93-204 37-160 (204)
75 3hem_A Cyclopropane-fatty-acyl 99.5 3.2E-14 1.1E-18 120.3 11.7 100 83-186 59-185 (302)
76 3thr_A Glycine N-methyltransfe 99.5 9.5E-15 3.3E-19 122.7 7.9 91 95-186 56-177 (293)
77 3eey_A Putative rRNA methylase 99.5 3.1E-14 1.1E-18 112.8 10.2 136 93-228 19-191 (197)
78 3mti_A RRNA methylase; SAM-dep 99.5 5.4E-14 1.8E-18 110.3 11.4 93 93-186 19-137 (185)
79 1ej0_A FTSJ; methyltransferase 99.5 2.2E-13 7.4E-18 104.9 14.4 107 93-201 19-151 (180)
80 3g2m_A PCZA361.24; SAM-depende 99.5 1.1E-13 3.7E-18 116.9 13.7 89 96-186 82-192 (299)
81 3evz_A Methyltransferase; NYSG 99.5 8.4E-14 2.9E-18 112.9 12.4 116 93-210 52-203 (230)
82 3bkx_A SAM-dependent methyltra 99.5 1.9E-13 6.6E-18 113.5 14.7 92 93-184 40-159 (275)
83 2fk8_A Methoxy mycolic acid sy 99.5 8.3E-14 2.8E-18 118.5 12.5 101 82-186 76-196 (318)
84 3m70_A Tellurite resistance pr 99.5 4.4E-14 1.5E-18 118.4 10.5 113 95-209 119-259 (286)
85 3dou_A Ribosomal RNA large sub 99.5 3.2E-13 1.1E-17 107.3 14.8 131 92-226 21-182 (191)
86 2aot_A HMT, histamine N-methyl 99.5 1.7E-14 5.8E-19 121.6 7.8 92 95-186 51-174 (292)
87 2nyu_A Putative ribosomal RNA 99.5 2.2E-13 7.6E-18 107.5 13.5 116 92-210 18-168 (196)
88 1fbn_A MJ fibrillarin homologu 99.5 1.5E-13 5.2E-18 111.8 12.9 129 92-226 70-229 (230)
89 1dus_A MJ0882; hypothetical pr 99.5 1.7E-13 5.9E-18 107.3 12.5 113 93-210 49-180 (194)
90 3m33_A Uncharacterized protein 99.5 1.6E-14 5.4E-19 117.3 6.6 105 95-208 47-163 (226)
91 3njr_A Precorrin-6Y methylase; 99.5 1.1E-13 3.7E-18 111.0 11.3 104 93-203 52-171 (204)
92 4dzr_A Protein-(glutamine-N5) 99.5 1.3E-14 4.5E-19 115.7 5.9 128 95-226 29-206 (215)
93 3d2l_A SAM-dependent methyltra 99.5 2.6E-13 8.9E-18 110.4 13.7 86 95-183 32-136 (243)
94 3ggd_A SAM-dependent methyltra 99.5 1.1E-14 3.8E-19 119.2 4.8 112 67-185 33-164 (245)
95 3hm2_A Precorrin-6Y C5,15-meth 99.5 7E-14 2.4E-18 108.5 9.0 105 93-203 22-144 (178)
96 1zx0_A Guanidinoacetate N-meth 99.5 6.3E-15 2.2E-19 120.4 3.0 90 94-183 58-169 (236)
97 2b3t_A Protein methyltransfera 99.5 2.2E-13 7.6E-18 113.9 12.5 126 95-224 108-275 (276)
98 3iv6_A Putative Zn-dependent a 99.5 6.3E-14 2.1E-18 116.7 8.8 98 88-187 37-151 (261)
99 3gwz_A MMCR; methyltransferase 99.5 1.2E-12 4E-17 114.1 17.0 133 88-223 194-367 (369)
100 3uwp_A Histone-lysine N-methyl 99.5 3.4E-14 1.2E-18 124.6 6.6 101 83-183 160-287 (438)
101 1yzh_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.8E-18 111.3 9.1 112 95-208 40-178 (214)
102 3lpm_A Putative methyltransfer 99.5 3E-13 1E-17 112.1 11.7 112 93-207 45-196 (259)
103 3orh_A Guanidinoacetate N-meth 99.5 1.2E-14 3.9E-19 119.3 2.9 89 95-183 59-169 (236)
104 3i53_A O-methyltransferase; CO 99.5 8E-13 2.7E-17 113.3 14.4 125 94-223 167-330 (332)
105 3mq2_A 16S rRNA methyltransfer 99.5 2.7E-13 9.2E-18 109.1 10.4 114 94-208 25-180 (218)
106 1wzn_A SAM-dependent methyltra 99.5 3.5E-13 1.2E-17 110.6 11.1 101 84-186 29-147 (252)
107 3id6_C Fibrillarin-like rRNA/T 99.5 1.2E-12 3.9E-17 107.2 13.7 119 92-212 72-216 (232)
108 2ip2_A Probable phenazine-spec 99.5 4E-12 1.4E-16 108.8 17.8 125 94-223 166-332 (334)
109 3p9n_A Possible methyltransfer 99.5 1.9E-13 6.5E-18 107.8 8.5 92 95-186 43-155 (189)
110 2nxc_A L11 mtase, ribosomal pr 99.4 6E-13 2.1E-17 110.2 11.7 117 94-216 118-248 (254)
111 3lst_A CALO1 methyltransferase 99.4 1.3E-12 4.5E-17 112.8 14.3 126 92-221 180-344 (348)
112 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.1E-13 3.8E-18 111.6 7.1 108 95-204 37-171 (213)
113 2r3s_A Uncharacterized protein 99.4 1.8E-12 6E-17 110.9 14.8 119 95-215 164-326 (335)
114 3dmg_A Probable ribosomal RNA 99.4 3.5E-13 1.2E-17 118.0 10.5 109 95-205 232-360 (381)
115 2ipx_A RRNA 2'-O-methyltransfe 99.4 7.9E-13 2.7E-17 107.6 12.0 120 91-212 72-217 (233)
116 2vdw_A Vaccinia virus capping 99.4 2.1E-13 7.2E-18 115.9 8.8 92 95-186 47-171 (302)
117 3dp7_A SAM-dependent methyltra 99.4 9.9E-13 3.4E-17 114.3 13.2 129 95-225 178-355 (363)
118 3q7e_A Protein arginine N-meth 99.4 2.2E-13 7.5E-18 117.9 8.8 88 94-181 64-170 (349)
119 2fyt_A Protein arginine N-meth 99.4 5.5E-13 1.9E-17 115.1 11.2 89 93-181 61-168 (340)
120 3reo_A (ISO)eugenol O-methyltr 99.4 4.1E-12 1.4E-16 110.6 16.7 127 94-225 201-367 (368)
121 3fpf_A Mtnas, putative unchara 99.4 3.7E-13 1.3E-17 113.6 9.4 90 91-184 117-222 (298)
122 1x19_A CRTF-related protein; m 99.4 2.1E-12 7.3E-17 111.8 14.5 127 93-224 187-358 (359)
123 1l3i_A Precorrin-6Y methyltran 99.4 5.3E-13 1.8E-17 104.3 9.6 106 93-204 30-152 (192)
124 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.4E-12 4.8E-17 106.9 11.6 111 95-207 45-190 (235)
125 3mcz_A O-methyltransferase; ad 99.4 4.3E-12 1.5E-16 109.4 15.2 133 88-224 170-348 (352)
126 1fp1_D Isoliquiritigenin 2'-O- 99.4 3.3E-12 1.1E-16 111.2 14.6 117 94-214 207-363 (372)
127 2ozv_A Hypothetical protein AT 99.4 2.5E-12 8.4E-17 106.8 13.1 106 94-202 34-185 (260)
128 2frn_A Hypothetical protein PH 99.4 9.7E-13 3.3E-17 110.4 10.5 107 94-204 123-249 (278)
129 1qzz_A RDMB, aclacinomycin-10- 99.4 4.8E-12 1.6E-16 109.9 15.3 129 94-225 180-356 (374)
130 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.1E-12 3.6E-17 108.0 10.3 114 92-211 92-223 (258)
131 3bgv_A MRNA CAP guanine-N7 met 99.4 6.1E-13 2.1E-17 113.0 9.0 92 95-186 33-157 (313)
132 2oxt_A Nucleoside-2'-O-methylt 99.4 1.1E-12 3.7E-17 109.5 10.2 90 92-186 70-187 (265)
133 1g8a_A Fibrillarin-like PRE-rR 99.4 3.3E-12 1.1E-16 103.4 12.8 92 93-186 70-180 (227)
134 1p91_A Ribosomal RNA large sub 99.4 9.5E-13 3.2E-17 109.2 9.6 87 95-187 84-181 (269)
135 3p9c_A Caffeic acid O-methyltr 99.4 6.2E-12 2.1E-16 109.4 15.1 126 94-223 199-363 (364)
136 3r0q_C Probable protein argini 99.4 1.1E-12 3.7E-17 114.7 10.2 93 89-183 56-168 (376)
137 2yxd_A Probable cobalt-precorr 99.4 2.1E-12 7.1E-17 100.2 10.8 102 93-203 32-148 (183)
138 3sso_A Methyltransferase; macr 99.4 2.5E-13 8.5E-18 118.7 6.0 89 95-183 215-323 (419)
139 2wa2_A Non-structural protein 99.4 1.2E-12 4E-17 109.9 9.7 92 90-186 76-195 (276)
140 3p2e_A 16S rRNA methylase; met 99.4 8.5E-13 2.9E-17 107.5 8.6 90 95-184 23-139 (225)
141 1yb2_A Hypothetical protein TA 99.4 1.1E-12 3.9E-17 109.6 9.5 114 91-211 105-236 (275)
142 1tw3_A COMT, carminomycin 4-O- 99.4 1.8E-11 6.2E-16 105.8 17.0 128 94-224 181-355 (360)
143 3dxy_A TRNA (guanine-N(7)-)-me 99.4 3.1E-13 1.1E-17 109.5 5.0 111 95-207 33-172 (218)
144 4dcm_A Ribosomal RNA large sub 99.4 2.5E-12 8.6E-17 112.4 11.1 110 95-206 221-355 (375)
145 3lbf_A Protein-L-isoaspartate 99.4 8.7E-13 3E-17 105.4 7.6 88 93-186 74-176 (210)
146 3hp7_A Hemolysin, putative; st 99.4 1.8E-12 6E-17 109.4 9.6 113 95-209 84-229 (291)
147 3mb5_A SAM-dependent methyltra 99.4 1.6E-12 5.5E-17 106.9 9.2 115 89-210 86-220 (255)
148 2esr_A Methyltransferase; stru 99.4 4.5E-13 1.5E-17 104.3 5.4 95 94-188 29-142 (177)
149 2y1w_A Histone-arginine methyl 99.4 2.8E-12 9.6E-17 110.9 10.5 91 93-184 47-155 (348)
150 2bm8_A Cephalosporin hydroxyla 99.4 5.6E-12 1.9E-16 103.3 11.6 105 96-202 81-207 (236)
151 1fp2_A Isoflavone O-methyltran 99.4 1.2E-11 4.2E-16 106.8 14.1 118 94-215 186-344 (352)
152 1g6q_1 HnRNP arginine N-methyl 99.3 2.6E-12 8.8E-17 110.3 9.6 87 95-181 37-142 (328)
153 3fzg_A 16S rRNA methylase; met 99.3 1.5E-12 5.2E-17 102.8 6.8 118 95-214 48-189 (200)
154 2fhp_A Methylase, putative; al 99.3 8.7E-13 3E-17 103.1 5.4 94 95-188 43-158 (187)
155 1i9g_A Hypothetical protein RV 99.3 6E-12 2.1E-16 104.9 10.7 112 91-208 94-226 (280)
156 3opn_A Putative hemolysin; str 99.3 2.2E-12 7.5E-17 105.6 7.6 107 95-208 36-180 (232)
157 2qe6_A Uncharacterized protein 99.3 9.2E-12 3.1E-16 104.3 11.0 92 96-187 77-199 (274)
158 2fpo_A Methylase YHHF; structu 99.3 1.7E-12 5.7E-17 103.8 6.2 91 96-186 54-162 (202)
159 3bzb_A Uncharacterized protein 99.3 9.5E-12 3.3E-16 104.4 11.1 136 67-206 54-231 (281)
160 2ift_A Putative methylase HI07 99.3 1.4E-12 4.8E-17 104.1 5.7 92 96-187 53-166 (201)
161 1vbf_A 231AA long hypothetical 99.3 3.6E-12 1.2E-16 103.3 8.1 88 93-186 67-167 (231)
162 1nv8_A HEMK protein; class I a 99.3 3.5E-12 1.2E-16 107.4 8.3 121 96-226 123-283 (284)
163 3tma_A Methyltransferase; thum 99.3 4.8E-12 1.6E-16 109.5 9.3 117 90-212 197-339 (354)
164 3gdh_A Trimethylguanosine synt 99.3 1.7E-13 5.8E-18 111.9 0.0 120 95-216 77-223 (241)
165 2p41_A Type II methyltransfera 99.3 1.4E-11 4.9E-16 104.7 11.8 91 92-186 78-193 (305)
166 2yvl_A TRMI protein, hypotheti 99.3 1.5E-11 5E-16 100.5 11.4 111 92-210 87-213 (248)
167 3htx_A HEN1; HEN1, small RNA m 99.3 9.5E-12 3.3E-16 116.8 11.4 91 95-186 720-836 (950)
168 3r3h_A O-methyltransferase, SA 99.3 1.8E-11 6.2E-16 100.6 11.8 87 95-183 59-169 (242)
169 1o54_A SAM-dependent O-methylt 99.3 5.4E-12 1.9E-16 105.4 8.5 113 92-211 108-238 (277)
170 2xyq_A Putative 2'-O-methyl tr 99.3 2.8E-11 9.4E-16 102.1 12.7 114 92-210 59-195 (290)
171 3adn_A Spermidine synthase; am 99.3 4.4E-11 1.5E-15 101.2 13.8 92 95-186 82-200 (294)
172 2pjd_A Ribosomal RNA small sub 99.3 5.2E-12 1.8E-16 109.0 8.0 106 95-203 195-321 (343)
173 2b25_A Hypothetical protein; s 99.3 1.8E-11 6.3E-16 105.0 11.4 102 93-200 102-233 (336)
174 1af7_A Chemotaxis receptor met 99.3 5.1E-12 1.7E-16 105.9 7.5 91 96-186 105-254 (274)
175 3u81_A Catechol O-methyltransf 99.3 1.7E-11 5.7E-16 99.0 9.7 113 95-210 57-194 (221)
176 3bwc_A Spermidine synthase; SA 99.3 4.5E-12 1.5E-16 107.7 6.5 116 95-210 94-238 (304)
177 1u2z_A Histone-lysine N-methyl 99.3 9.3E-12 3.2E-16 110.4 8.7 92 92-183 238-358 (433)
178 1zg3_A Isoflavanone 4'-O-methy 99.3 6E-11 2.1E-15 102.6 13.5 123 95-221 192-355 (358)
179 2yxe_A Protein-L-isoaspartate 99.3 8.7E-12 3E-16 99.9 7.5 89 93-186 74-179 (215)
180 1dl5_A Protein-L-isoaspartate 99.3 8.1E-12 2.8E-16 106.6 7.6 89 93-186 72-177 (317)
181 4a6d_A Hydroxyindole O-methylt 99.3 8.1E-11 2.8E-15 101.9 14.0 132 93-227 176-348 (353)
182 3tfw_A Putative O-methyltransf 99.3 4E-11 1.4E-15 98.8 11.2 87 95-183 62-169 (248)
183 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.9E-11 6.6E-16 100.3 9.2 93 94-186 47-175 (246)
184 4hc4_A Protein arginine N-meth 99.2 2.5E-11 8.4E-16 105.9 9.9 86 95-181 82-186 (376)
185 4azs_A Methyltransferase WBDD; 99.2 6.4E-12 2.2E-16 115.4 5.9 92 95-187 65-176 (569)
186 3b3j_A Histone-arginine methyl 99.2 2.5E-11 8.6E-16 109.2 9.6 91 93-184 155-263 (480)
187 1ws6_A Methyltransferase; stru 99.2 3E-12 1E-16 98.5 3.0 92 95-188 40-151 (171)
188 2ld4_A Anamorsin; methyltransf 99.2 6.9E-12 2.4E-16 97.5 5.0 113 93-211 9-135 (176)
189 3lec_A NADB-rossmann superfami 99.2 1.1E-10 3.9E-15 95.1 11.8 128 93-225 18-164 (230)
190 1jg1_A PIMT;, protein-L-isoasp 99.2 2.2E-11 7.7E-16 99.2 7.3 88 93-187 88-192 (235)
191 3kr9_A SAM-dependent methyltra 99.2 1.5E-10 5.3E-15 94.0 12.2 127 93-225 12-158 (225)
192 3ntv_A MW1564 protein; rossman 99.2 2.4E-11 8.2E-16 99.0 7.4 86 95-182 70-174 (232)
193 3dr5_A Putative O-methyltransf 99.2 1.7E-11 5.8E-16 99.5 6.2 86 95-182 55-161 (221)
194 1ixk_A Methyltransferase; open 99.2 3.9E-11 1.3E-15 102.4 8.8 112 93-204 115-267 (315)
195 3tm4_A TRNA (guanine N2-)-meth 99.2 1.5E-10 5.3E-15 100.9 12.6 124 94-224 215-364 (373)
196 1o9g_A RRNA methyltransferase; 99.2 2.2E-11 7.4E-16 100.2 6.7 91 95-186 50-215 (250)
197 3duw_A OMT, O-methyltransferas 99.2 1.1E-10 3.8E-15 94.0 10.1 87 95-183 57-166 (223)
198 1i1n_A Protein-L-isoaspartate 99.2 5.7E-11 1.9E-15 95.9 8.4 88 94-186 75-184 (226)
199 3c3p_A Methyltransferase; NP_9 99.2 2.9E-11 1E-15 96.7 6.4 85 95-182 55-158 (210)
200 2gpy_A O-methyltransferase; st 99.2 2.2E-11 7.7E-16 98.9 5.5 87 95-183 53-159 (233)
201 3gnl_A Uncharacterized protein 99.2 1.4E-10 4.9E-15 95.2 10.3 128 93-225 18-164 (244)
202 3ajd_A Putative methyltransfer 99.2 3E-11 1E-15 101.0 6.3 107 94-200 81-228 (274)
203 1inl_A Spermidine synthase; be 99.2 1.8E-10 6.1E-15 97.5 11.0 92 95-186 89-207 (296)
204 3a27_A TYW2, uncharacterized p 99.2 3.4E-11 1.2E-15 100.6 6.2 90 93-186 116-221 (272)
205 3k6r_A Putative transferase PH 99.2 6.1E-11 2.1E-15 99.4 7.6 121 94-218 123-267 (278)
206 1r18_A Protein-L-isoaspartate( 99.2 6.6E-11 2.3E-15 95.8 7.7 88 93-186 81-196 (227)
207 2igt_A SAM dependent methyltra 99.2 8.1E-11 2.8E-15 101.2 8.6 105 95-200 152-288 (332)
208 3tr6_A O-methyltransferase; ce 99.2 1.2E-10 4.2E-15 93.8 9.2 87 95-183 63-173 (225)
209 3gjy_A Spermidine synthase; AP 99.1 5.3E-11 1.8E-15 101.4 7.3 90 98-187 91-203 (317)
210 2qm3_A Predicted methyltransfe 99.1 3.3E-10 1.1E-14 98.7 11.8 108 95-204 171-301 (373)
211 1iy9_A Spermidine synthase; ro 99.1 1.4E-10 4.9E-15 97.1 9.1 92 95-186 74-191 (275)
212 2pbf_A Protein-L-isoaspartate 99.1 8.8E-11 3E-15 94.8 6.8 89 93-186 77-195 (227)
213 3giw_A Protein of unknown func 99.1 8.8E-11 3E-15 98.0 6.7 108 96-203 78-221 (277)
214 1uir_A Polyamine aminopropyltr 99.1 5.3E-10 1.8E-14 95.3 11.7 106 95-200 76-214 (314)
215 1ne2_A Hypothetical protein TA 99.1 8.2E-10 2.8E-14 87.4 12.0 100 94-202 49-161 (200)
216 2pt6_A Spermidine synthase; tr 99.1 3.9E-10 1.3E-14 96.5 10.6 92 95-186 115-232 (321)
217 2ih2_A Modification methylase 99.1 1.9E-09 6.3E-14 94.9 14.5 115 95-210 38-192 (421)
218 3frh_A 16S rRNA methylase; met 99.1 1.8E-09 6.2E-14 88.2 13.1 132 75-214 87-243 (253)
219 2h00_A Methyltransferase 10 do 99.1 3E-09 1E-13 87.3 14.2 124 96-221 65-248 (254)
220 1sui_A Caffeoyl-COA O-methyltr 99.1 1.2E-10 4E-15 96.0 5.7 87 95-183 78-189 (247)
221 2cmg_A Spermidine synthase; tr 99.1 7.4E-10 2.5E-14 92.1 10.6 84 95-186 71-173 (262)
222 1sqg_A SUN protein, FMU protei 99.1 8.4E-10 2.9E-14 97.9 11.4 107 94-200 244-391 (429)
223 2yxl_A PH0851 protein, 450AA l 99.1 6E-10 2.1E-14 99.5 10.1 94 94-187 257-392 (450)
224 4dmg_A Putative uncharacterize 99.0 2.2E-10 7.4E-15 100.6 6.7 91 95-186 213-328 (393)
225 3cbg_A O-methyltransferase; cy 99.0 3.1E-10 1E-14 92.4 7.0 87 95-183 71-181 (232)
226 1mjf_A Spermidine synthase; sp 99.0 8.7E-10 3E-14 92.5 9.9 91 95-186 74-195 (281)
227 1xj5_A Spermidine synthase 1; 99.0 3.1E-10 1.1E-14 97.6 7.3 91 95-185 119-236 (334)
228 1wy7_A Hypothetical protein PH 99.0 1.3E-09 4.4E-14 86.6 9.9 104 94-204 47-167 (207)
229 3evf_A RNA-directed RNA polyme 99.0 1.9E-09 6.5E-14 89.3 10.7 118 90-207 68-211 (277)
230 2yx1_A Hypothetical protein MJ 99.0 8.5E-10 2.9E-14 94.9 8.9 107 95-212 194-319 (336)
231 2avd_A Catechol-O-methyltransf 99.0 3.8E-10 1.3E-14 91.1 6.3 87 95-183 68-178 (229)
232 2hnk_A SAM-dependent O-methylt 99.0 1.7E-09 5.9E-14 88.1 10.4 88 95-184 59-181 (239)
233 2i7c_A Spermidine synthase; tr 99.0 1.4E-09 4.9E-14 91.2 10.1 91 95-185 77-193 (283)
234 2o07_A Spermidine synthase; st 99.0 4.4E-10 1.5E-14 95.5 6.9 91 95-185 94-210 (304)
235 1yub_A Ermam, rRNA methyltrans 99.0 5.5E-11 1.9E-15 97.7 0.7 91 93-185 26-146 (245)
236 2frx_A Hypothetical protein YE 99.0 8.7E-10 3E-14 99.1 8.3 91 96-186 117-248 (479)
237 3c3y_A Pfomt, O-methyltransfer 99.0 3.8E-10 1.3E-14 92.3 5.3 87 95-183 69-180 (237)
238 2b2c_A Spermidine synthase; be 99.0 6.1E-10 2.1E-14 95.0 6.6 91 95-185 107-223 (314)
239 2as0_A Hypothetical protein PH 99.0 4.4E-10 1.5E-14 98.6 5.7 92 95-186 216-337 (396)
240 3m6w_A RRNA methylase; rRNA me 99.0 3.7E-10 1.2E-14 101.0 5.2 93 94-186 99-231 (464)
241 3v97_A Ribosomal RNA large sub 99.0 9.1E-10 3.1E-14 103.3 7.6 92 95-186 538-659 (703)
242 2b78_A Hypothetical protein SM 98.9 1E-09 3.6E-14 96.0 7.1 92 95-186 211-333 (385)
243 3m4x_A NOL1/NOP2/SUN family pr 98.9 7.3E-10 2.5E-14 98.9 6.0 110 94-203 103-254 (456)
244 2f8l_A Hypothetical protein LM 98.9 3.2E-09 1.1E-13 91.4 9.1 109 95-204 129-278 (344)
245 1zq9_A Probable dimethyladenos 98.9 3.4E-09 1.2E-13 89.1 8.8 60 93-155 25-100 (285)
246 3lcv_B Sisomicin-gentamicin re 98.9 2E-09 6.9E-14 88.8 6.6 107 75-186 113-237 (281)
247 3c0k_A UPF0064 protein YCCW; P 98.9 4.2E-09 1.4E-13 92.4 7.6 92 95-186 219-341 (396)
248 2h1r_A Dimethyladenosine trans 98.8 5.3E-09 1.8E-13 88.5 7.7 61 93-156 39-114 (299)
249 3gru_A Dimethyladenosine trans 98.8 6E-09 2E-13 88.0 7.3 67 88-155 42-121 (295)
250 1wxx_A TT1595, hypothetical pr 98.8 1.7E-09 5.7E-14 94.6 4.0 90 96-186 209-327 (382)
251 3gcz_A Polyprotein; flavivirus 98.8 1.4E-08 4.6E-13 84.4 9.0 117 91-207 85-228 (282)
252 2okc_A Type I restriction enzy 98.8 2E-08 7E-13 89.4 9.5 115 95-210 170-337 (445)
253 1uwv_A 23S rRNA (uracil-5-)-me 98.8 5.6E-08 1.9E-12 86.3 12.1 113 93-212 283-416 (433)
254 3ldu_A Putative methylase; str 98.8 1.8E-08 6.2E-13 88.2 8.4 99 87-186 186-346 (385)
255 3k0b_A Predicted N6-adenine-sp 98.8 2.9E-08 9.9E-13 87.1 9.5 98 88-186 193-352 (393)
256 1qam_A ERMC' methyltransferase 98.7 4.6E-09 1.6E-13 86.3 4.1 68 86-155 20-101 (244)
257 3ldg_A Putative uncharacterize 98.7 3.7E-08 1.3E-12 86.2 9.1 98 88-186 186-345 (384)
258 2qfm_A Spermine synthase; sper 98.7 2.2E-08 7.6E-13 86.4 7.5 133 95-227 187-363 (364)
259 2jjq_A Uncharacterized RNA met 98.6 7.9E-08 2.7E-12 85.1 8.8 85 94-183 288-386 (425)
260 3fut_A Dimethyladenosine trans 98.6 3.7E-08 1.3E-12 82.2 6.3 61 93-155 44-117 (271)
261 3eld_A Methyltransferase; flav 98.6 1.6E-07 5.4E-12 78.5 10.0 116 92-207 77-218 (300)
262 3tqs_A Ribosomal RNA small sub 98.6 4.3E-08 1.5E-12 81.1 6.5 62 92-155 25-103 (255)
263 4auk_A Ribosomal RNA large sub 98.6 4.8E-07 1.6E-11 78.2 12.3 81 93-177 208-296 (375)
264 2px2_A Genome polyprotein [con 98.6 4.7E-07 1.6E-11 74.2 11.1 108 92-201 69-204 (269)
265 2b9e_A NOL1/NOP2/SUN domain fa 98.6 2.6E-07 8.8E-12 78.5 9.5 107 94-201 100-252 (309)
266 3bt7_A TRNA (uracil-5-)-methyl 98.5 1.3E-07 4.4E-12 82.2 7.4 109 97-212 214-353 (369)
267 3o4f_A Spermidine synthase; am 98.5 5.1E-07 1.7E-11 75.9 10.7 92 95-186 82-200 (294)
268 2qy6_A UPF0209 protein YFCK; s 98.5 1.6E-07 5.6E-12 77.7 7.3 123 95-224 59-246 (257)
269 2k4m_A TR8_protein, UPF0146 pr 98.5 1.6E-07 5.5E-12 70.6 6.5 61 95-156 34-97 (153)
270 3v97_A Ribosomal RNA large sub 98.5 6.1E-07 2.1E-11 84.2 11.1 116 89-213 183-367 (703)
271 3ftd_A Dimethyladenosine trans 98.5 5.2E-07 1.8E-11 74.2 8.8 64 92-155 27-102 (249)
272 2dul_A N(2),N(2)-dimethylguano 98.4 7.1E-08 2.4E-12 84.2 2.6 85 96-183 47-163 (378)
273 2ar0_A M.ecoki, type I restric 98.4 1.4E-06 4.7E-11 79.4 11.0 133 94-226 167-363 (541)
274 3lkz_A Non-structural protein 98.4 2.7E-06 9.1E-11 70.9 11.5 96 88-186 86-206 (321)
275 3axs_A Probable N(2),N(2)-dime 98.4 1E-07 3.4E-12 83.5 2.8 87 95-184 51-158 (392)
276 3p8z_A Mtase, non-structural p 98.4 3.4E-06 1.2E-10 68.2 11.1 92 91-186 73-188 (267)
277 3b5i_A S-adenosyl-L-methionine 98.3 2.1E-06 7E-11 74.7 9.6 92 97-188 53-229 (374)
278 3s1s_A Restriction endonucleas 98.3 4E-06 1.4E-10 78.9 11.6 118 95-212 320-498 (878)
279 2r6z_A UPF0341 protein in RSP 98.3 8.4E-08 2.9E-12 79.5 -0.0 61 95-156 82-169 (258)
280 4gqb_A Protein arginine N-meth 98.3 4.9E-07 1.7E-11 83.5 4.8 84 96-181 357-464 (637)
281 3uzu_A Ribosomal RNA small sub 98.3 6.1E-07 2.1E-11 75.1 4.4 63 93-155 39-121 (279)
282 1qyr_A KSGA, high level kasuga 98.2 6.3E-07 2.2E-11 73.9 3.5 60 93-155 18-97 (252)
283 3khk_A Type I restriction-modi 98.2 8.3E-06 2.8E-10 74.3 10.9 129 98-226 246-447 (544)
284 2efj_A 3,7-dimethylxanthine me 98.2 8.8E-07 3E-11 77.2 3.7 93 97-189 53-230 (384)
285 3ua3_A Protein arginine N-meth 98.2 3.7E-07 1.3E-11 84.6 0.9 85 97-181 410-531 (745)
286 2oyr_A UPF0341 protein YHIQ; a 98.1 3.9E-07 1.3E-11 75.4 0.8 84 94-178 84-194 (258)
287 3lkd_A Type I restriction-modi 98.1 2.7E-05 9.1E-10 70.9 12.6 116 95-210 220-388 (542)
288 1m6y_A S-adenosyl-methyltransf 98.1 9.5E-07 3.3E-11 74.7 2.0 63 93-155 23-105 (301)
289 4fzv_A Putative methyltransfer 98.0 5.6E-06 1.9E-10 71.6 6.2 94 93-186 145-286 (359)
290 3ll7_A Putative methyltransfer 98.0 5.1E-06 1.7E-10 73.0 5.0 60 95-155 92-170 (410)
291 3r24_A NSP16, 2'-O-methyl tran 98.0 9.2E-05 3.1E-09 61.8 11.6 127 77-210 89-239 (344)
292 1m6e_X S-adenosyl-L-methionnin 98.0 7.9E-06 2.7E-10 70.6 5.5 95 95-189 50-214 (359)
293 3cvo_A Methyltransferase-like 97.8 6.1E-05 2.1E-09 59.9 8.5 81 95-181 29-151 (202)
294 3c6k_A Spermine synthase; sper 97.6 4.7E-05 1.6E-09 66.0 4.6 91 95-185 204-332 (381)
295 2wk1_A NOVP; transferase, O-me 97.5 0.00021 7.1E-09 59.7 7.2 86 95-181 105-241 (282)
296 3vyw_A MNMC2; tRNA wobble urid 97.5 0.0005 1.7E-08 58.0 9.2 123 95-224 95-259 (308)
297 3ufb_A Type I restriction-modi 97.4 0.0015 5.3E-08 59.2 12.6 116 95-210 216-392 (530)
298 2vz8_A Fatty acid synthase; tr 97.1 0.00039 1.3E-08 73.4 5.0 89 95-183 1239-1347(2512)
299 1wg8_A Predicted S-adenosylmet 96.9 0.0011 3.6E-08 55.2 5.0 62 93-155 19-96 (285)
300 2zig_A TTHA0409, putative modi 96.6 0.0017 5.9E-08 54.3 4.6 38 95-133 234-271 (297)
301 1f8f_A Benzyl alcohol dehydrog 95.7 0.018 6.2E-07 49.3 6.4 96 83-183 177-288 (371)
302 2oo3_A Protein involved in cat 95.6 0.0085 2.9E-07 49.8 3.6 108 96-204 91-218 (283)
303 2dph_A Formaldehyde dismutase; 95.5 0.019 6.4E-07 49.8 5.8 91 91-183 180-298 (398)
304 1g60_A Adenine-specific methyl 94.9 0.029 9.9E-07 45.8 4.8 37 94-131 210-246 (260)
305 3goh_A Alcohol dehydrogenase, 94.8 0.078 2.7E-06 44.2 7.5 90 82-183 129-228 (315)
306 3uko_A Alcohol dehydrogenase c 94.6 0.1 3.5E-06 44.7 7.9 91 88-183 185-294 (378)
307 1i4w_A Mitochondrial replicati 94.4 0.045 1.5E-06 46.9 5.1 47 96-142 58-117 (353)
308 4ej6_A Putative zinc-binding d 94.4 0.11 3.8E-06 44.5 7.6 89 90-183 176-283 (370)
309 3gms_A Putative NADPH:quinone 94.2 0.14 4.9E-06 43.1 7.9 92 85-183 133-242 (340)
310 1kol_A Formaldehyde dehydrogen 94.1 0.062 2.1E-06 46.4 5.5 93 91-183 180-299 (398)
311 3two_A Mannitol dehydrogenase; 94.1 0.041 1.4E-06 46.6 4.3 83 92-183 172-264 (348)
312 3ip1_A Alcohol dehydrogenase, 94.0 0.25 8.6E-06 42.7 9.1 87 93-183 210-317 (404)
313 2zig_A TTHA0409, putative modi 93.9 0.058 2E-06 44.8 4.6 78 131-208 21-132 (297)
314 1pl8_A Human sorbitol dehydrog 93.9 0.039 1.3E-06 47.0 3.6 88 91-183 166-272 (356)
315 3fpc_A NADP-dependent alcohol 93.6 0.067 2.3E-06 45.4 4.7 89 90-183 160-265 (352)
316 1p0f_A NADP-dependent alcohol 93.6 0.062 2.1E-06 46.0 4.4 94 85-183 180-292 (373)
317 1cdo_A Alcohol dehydrogenase; 93.6 0.084 2.9E-06 45.1 5.2 92 87-183 183-293 (374)
318 1pqw_A Polyketide synthase; ro 93.5 0.081 2.8E-06 40.8 4.6 87 90-183 32-136 (198)
319 1e3i_A Alcohol dehydrogenase, 93.5 0.086 3E-06 45.1 5.2 94 85-183 184-296 (376)
320 2hwk_A Helicase NSP2; rossman 93.5 0.12 4.2E-06 42.7 5.7 52 136-188 195-258 (320)
321 3s2e_A Zinc-containing alcohol 93.5 0.035 1.2E-06 46.9 2.6 88 90-183 160-262 (340)
322 3uog_A Alcohol dehydrogenase; 93.3 0.082 2.8E-06 45.1 4.7 93 85-184 178-287 (363)
323 2jhf_A Alcohol dehydrogenase E 93.1 0.077 2.6E-06 45.4 4.3 92 87-183 182-292 (374)
324 2fzw_A Alcohol dehydrogenase c 93.1 0.087 3E-06 45.0 4.6 92 87-183 181-291 (373)
325 3pvc_A TRNA 5-methylaminomethy 92.7 0.28 9.7E-06 45.5 7.7 115 95-216 57-236 (689)
326 2b5w_A Glucose dehydrogenase; 92.3 0.32 1.1E-05 41.2 7.0 85 93-184 163-273 (357)
327 1boo_A Protein (N-4 cytosine-s 92.1 0.26 8.8E-06 41.5 6.1 76 131-206 14-114 (323)
328 3jyn_A Quinone oxidoreductase; 92.1 0.3 1E-05 40.8 6.5 90 88-184 132-239 (325)
329 3tka_A Ribosomal RNA small sub 92.0 0.11 3.9E-06 44.1 3.8 63 93-155 54-135 (347)
330 4b7c_A Probable oxidoreductase 91.7 0.21 7.2E-06 41.9 5.1 95 82-183 135-247 (336)
331 1v3u_A Leukotriene B4 12- hydr 91.6 0.095 3.2E-06 44.0 2.8 94 83-183 132-243 (333)
332 3m6i_A L-arabinitol 4-dehydrog 91.5 0.11 3.8E-06 44.1 3.2 89 90-183 173-282 (363)
333 3g7u_A Cytosine-specific methy 91.4 0.17 5.9E-06 43.6 4.3 58 98-155 3-78 (376)
334 3tos_A CALS11; methyltransfera 91.3 1.1 3.7E-05 36.6 8.8 113 95-210 68-244 (257)
335 4dvj_A Putative zinc-dependent 91.2 0.58 2E-05 39.7 7.5 82 96-183 171-269 (363)
336 3iht_A S-adenosyl-L-methionine 91.2 0.22 7.4E-06 37.6 4.1 86 95-181 39-144 (174)
337 4eye_A Probable oxidoreductase 91.2 0.27 9.3E-06 41.4 5.3 93 83-183 146-256 (342)
338 3jv7_A ADH-A; dehydrogenase, n 90.8 0.094 3.2E-06 44.3 2.0 86 92-183 167-269 (345)
339 1rjw_A ADH-HT, alcohol dehydro 90.7 0.21 7.3E-06 42.0 4.2 85 93-183 161-260 (339)
340 1e3j_A NADP(H)-dependent ketos 90.7 0.59 2E-05 39.4 7.0 87 91-183 163-270 (352)
341 3ps9_A TRNA 5-methylaminomethy 90.6 0.93 3.2E-05 41.8 8.7 64 146-216 177-244 (676)
342 1yb5_A Quinone oxidoreductase; 90.5 0.51 1.7E-05 39.9 6.4 94 83-183 157-268 (351)
343 2d8a_A PH0655, probable L-thre 89.9 0.55 1.9E-05 39.5 6.1 89 90-184 162-267 (348)
344 2dq4_A L-threonine 3-dehydroge 89.9 0.17 5.9E-06 42.6 2.9 87 91-183 160-261 (343)
345 1uuf_A YAHK, zinc-type alcohol 89.7 0.29 9.8E-06 41.8 4.2 84 93-183 191-287 (369)
346 1vj0_A Alcohol dehydrogenase, 89.6 0.12 4.2E-06 44.3 1.8 88 91-183 189-297 (380)
347 1g55_A DNA cytosine methyltran 89.5 0.1 3.5E-06 44.4 1.2 108 97-204 2-141 (343)
348 3qwb_A Probable quinone oxidor 89.5 0.37 1.3E-05 40.3 4.7 87 90-183 142-246 (334)
349 2c0c_A Zinc binding alcohol de 89.4 0.73 2.5E-05 39.1 6.5 87 91-184 158-261 (362)
350 2py6_A Methyltransferase FKBM; 89.1 0.31 1.1E-05 42.4 4.0 37 94-130 224-263 (409)
351 4eez_A Alcohol dehydrogenase 1 88.9 0.78 2.7E-05 38.4 6.3 88 91-183 158-262 (348)
352 3ubt_Y Modification methylase 88.7 0.76 2.6E-05 38.3 6.0 107 98-204 1-135 (331)
353 4dup_A Quinone oxidoreductase; 88.4 0.73 2.5E-05 38.9 5.8 94 84-184 155-265 (353)
354 3fbg_A Putative arginate lyase 88.2 1.3 4.4E-05 37.2 7.3 81 96-183 150-247 (346)
355 4a2c_A Galactitol-1-phosphate 88.2 0.64 2.2E-05 38.9 5.3 91 89-184 153-260 (346)
356 3trk_A Nonstructural polyprote 87.9 0.77 2.6E-05 37.7 5.2 65 146-210 209-286 (324)
357 2eih_A Alcohol dehydrogenase; 87.8 1.3 4.3E-05 37.2 6.9 85 92-183 162-264 (343)
358 2hcy_A Alcohol dehydrogenase 1 87.5 0.2 6.9E-06 42.3 1.7 86 93-184 166-269 (347)
359 1iz0_A Quinone oxidoreductase; 87.5 0.17 5.8E-06 41.8 1.2 89 86-183 116-217 (302)
360 3nx4_A Putative oxidoreductase 87.5 0.29 1E-05 40.7 2.7 83 94-183 143-240 (324)
361 2j3h_A NADP-dependent oxidored 87.3 0.78 2.7E-05 38.4 5.3 94 83-183 142-254 (345)
362 1qor_A Quinone oxidoreductase; 87.3 0.75 2.6E-05 38.2 5.1 90 88-184 132-239 (327)
363 2cdc_A Glucose dehydrogenase g 87.0 1.4 4.7E-05 37.3 6.7 77 97-183 181-277 (366)
364 1wly_A CAAR, 2-haloacrylate re 86.9 1.1 3.8E-05 37.3 6.0 92 86-184 135-244 (333)
365 3krt_A Crotonyl COA reductase; 86.8 1.1 3.8E-05 39.3 6.2 85 92-183 224-343 (456)
366 3tqh_A Quinone oxidoreductase; 86.7 0.74 2.5E-05 38.3 4.7 87 90-183 146-244 (321)
367 1eg2_A Modification methylase 86.1 1.5 5.2E-05 36.7 6.4 54 134-187 41-109 (319)
368 1g60_A Adenine-specific methyl 86.0 1.1 3.8E-05 36.2 5.3 69 134-205 7-92 (260)
369 2j8z_A Quinone oxidoreductase; 85.7 1.2 4.1E-05 37.6 5.6 93 85-184 151-261 (354)
370 1tt7_A YHFP; alcohol dehydroge 85.4 1.4 4.8E-05 36.6 5.8 84 93-183 146-246 (330)
371 3gaz_A Alcohol dehydrogenase s 84.7 1.4 4.8E-05 36.9 5.6 87 88-183 142-245 (343)
372 4a27_A Synaptic vesicle membra 84.0 1.6 5.5E-05 36.7 5.6 90 87-183 133-237 (349)
373 2cf5_A Atccad5, CAD, cinnamyl 83.8 0.53 1.8E-05 39.8 2.5 85 93-183 176-274 (357)
374 1zsy_A Mitochondrial 2-enoyl t 83.5 4.5 0.00015 33.9 8.3 90 88-183 159-269 (357)
375 2zb4_A Prostaglandin reductase 83.2 1.8 6.3E-05 36.3 5.7 88 90-183 152-259 (357)
376 1boo_A Protein (N-4 cytosine-s 83.2 0.84 2.9E-05 38.3 3.5 39 94-133 250-288 (323)
377 3fwz_A Inner membrane protein 83.0 3.7 0.00013 29.4 6.6 86 97-185 7-106 (140)
378 3qv2_A 5-cytosine DNA methyltr 82.8 0.79 2.7E-05 38.7 3.2 110 95-204 8-152 (327)
379 2c7p_A Modification methylase 82.8 1.1 3.7E-05 37.8 4.0 108 96-203 10-144 (327)
380 1xa0_A Putative NADPH dependen 82.3 0.93 3.2E-05 37.7 3.5 85 92-183 144-245 (328)
381 2km1_A Protein DRE2; yeast, an 82.2 0.54 1.9E-05 34.5 1.7 39 144-182 55-96 (136)
382 4gua_A Non-structural polyprot 82.0 2.6 8.8E-05 38.2 6.2 64 146-209 219-295 (670)
383 2vn8_A Reticulon-4-interacting 81.9 1 3.4E-05 38.3 3.6 84 94-183 181-279 (375)
384 2raf_A Putative dinucleotide-b 80.0 6.7 0.00023 30.3 7.5 92 96-206 18-124 (209)
385 2h6e_A ADH-4, D-arabinose 1-de 79.8 0.29 9.9E-06 41.2 -0.6 84 93-183 168-268 (344)
386 1eg2_A Modification methylase 79.7 1.4 4.9E-05 36.9 3.7 35 94-129 240-274 (319)
387 3ggo_A Prephenate dehydrogenas 78.4 13 0.00043 30.8 9.2 110 97-212 33-154 (314)
388 1rjd_A PPM1P, carboxy methyl t 78.3 10 0.00034 31.9 8.5 86 95-181 96-229 (334)
389 3llv_A Exopolyphosphatase-rela 78.0 8.3 0.00028 27.3 7.1 56 97-155 6-77 (141)
390 4a0s_A Octenoyl-COA reductase/ 77.8 1.7 5.9E-05 37.8 3.8 85 92-183 216-335 (447)
391 4h0n_A DNMT2; SAH binding, tra 77.8 1.1 3.9E-05 37.8 2.5 58 98-155 4-76 (333)
392 1jvb_A NAD(H)-dependent alcoho 77.7 2.2 7.7E-05 35.7 4.4 86 92-183 166-270 (347)
393 3ius_A Uncharacterized conserv 76.7 17 0.0006 28.7 9.4 54 98-156 6-71 (286)
394 2qrv_A DNA (cytosine-5)-methyl 75.8 1.4 4.7E-05 36.6 2.5 61 95-155 14-90 (295)
395 3c85_A Putative glutathione-re 75.6 5.7 0.00019 29.7 5.8 86 96-184 38-139 (183)
396 3slk_A Polyketide synthase ext 75.4 3.8 0.00013 38.7 5.6 86 90-183 339-441 (795)
397 3qha_A Putative oxidoreductase 75.0 7.5 0.00026 31.7 6.8 98 97-201 15-121 (296)
398 3gpi_A NAD-dependent epimerase 69.2 23 0.00079 28.0 8.4 56 97-155 3-70 (286)
399 3gqv_A Enoyl reductase; medium 68.8 4.8 0.00016 34.1 4.3 82 95-183 163-262 (371)
400 1id1_A Putative potassium chan 67.8 18 0.00061 26.0 6.8 84 97-185 3-106 (153)
401 2uyo_A Hypothetical protein ML 67.8 23 0.0008 29.2 8.3 88 97-186 103-220 (310)
402 4eso_A Putative oxidoreductase 67.7 6.9 0.00024 31.0 4.8 90 96-186 7-140 (255)
403 3rht_A (gatase1)-like protein; 67.6 4.3 0.00015 33.0 3.6 79 97-186 4-88 (259)
404 3hn2_A 2-dehydropantoate 2-red 67.2 6.4 0.00022 32.4 4.6 103 98-205 3-122 (312)
405 3l9w_A Glutathione-regulated p 66.8 11 0.00038 32.6 6.3 85 96-185 3-103 (413)
406 4dio_A NAD(P) transhydrogenase 66.4 2.7 9.4E-05 36.5 2.3 34 96-130 189-224 (405)
407 4e4y_A Short chain dehydrogena 65.8 17 0.00058 28.3 6.8 91 96-186 3-128 (244)
408 1ks9_A KPA reductase;, 2-dehyd 64.4 6.3 0.00022 31.5 4.0 83 98-183 1-96 (291)
409 3g0o_A 3-hydroxyisobutyrate de 63.5 17 0.00059 29.5 6.6 99 97-201 7-118 (303)
410 3g17_A Similar to 2-dehydropan 63.1 4.6 0.00016 33.0 3.0 84 98-184 3-96 (294)
411 2cvz_A Dehydrogenase, 3-hydrox 62.4 15 0.0005 29.4 5.9 98 98-202 2-107 (289)
412 4gbj_A 6-phosphogluconate dehy 61.2 23 0.00079 28.9 7.0 100 99-203 7-115 (297)
413 2f1k_A Prephenate dehydrogenas 60.9 27 0.00092 27.7 7.3 99 99-207 2-111 (279)
414 3i83_A 2-dehydropantoate 2-red 60.9 15 0.00051 30.2 5.8 102 98-204 3-123 (320)
415 3orf_A Dihydropteridine reduct 60.8 39 0.0013 26.3 8.1 89 97-186 22-146 (251)
416 2pv7_A T-protein [includes: ch 60.3 14 0.00048 30.1 5.5 72 98-181 22-96 (298)
417 4e21_A 6-phosphogluconate dehy 58.7 6.1 0.00021 33.6 3.0 103 96-202 21-132 (358)
418 3pxx_A Carveol dehydrogenase; 58.5 22 0.00075 28.3 6.3 89 96-185 9-154 (287)
419 3ijr_A Oxidoreductase, short c 58.0 21 0.00073 28.7 6.2 89 96-185 46-183 (291)
420 3tka_A Ribosomal RNA small sub 57.4 6.3 0.00022 33.4 2.8 38 162-201 252-289 (347)
421 2cuk_A Glycerate dehydrogenase 57.3 4.2 0.00014 33.8 1.8 97 96-200 143-244 (311)
422 4fgs_A Probable dehydrogenase 57.0 20 0.00067 29.2 5.7 90 96-186 28-161 (273)
423 3gvx_A Glycerate dehydrogenase 56.9 3.5 0.00012 34.0 1.2 103 96-203 121-227 (290)
424 1wg8_A Predicted S-adenosylmet 56.8 7.1 0.00024 32.2 3.0 38 162-201 211-248 (285)
425 1piw_A Hypothetical zinc-type 56.4 14 0.00048 30.9 4.9 87 92-183 175-275 (360)
426 1q90_R Cytochrome B6-F complex 55.7 19 0.00065 21.3 4.0 22 6-27 12-33 (49)
427 2g76_A 3-PGDH, D-3-phosphoglyc 55.5 4.7 0.00016 34.0 1.8 102 96-205 164-275 (335)
428 3evt_A Phosphoglycerate dehydr 55.0 4.6 0.00016 33.9 1.6 101 96-205 136-247 (324)
429 3ado_A Lambda-crystallin; L-gu 54.5 30 0.001 28.8 6.6 121 96-222 5-158 (319)
430 1ej6_A Lambda2; icosahedral, n 54.4 28 0.00096 34.1 6.9 92 94-186 819-928 (1289)
431 4hy3_A Phosphoglycerate oxidor 54.4 5.5 0.00019 34.0 2.0 106 97-210 176-291 (365)
432 3dfu_A Uncharacterized protein 54.0 60 0.0021 25.6 8.0 66 96-181 5-72 (232)
433 3v2g_A 3-oxoacyl-[acyl-carrier 53.8 22 0.00077 28.3 5.6 89 96-185 30-166 (271)
434 3oig_A Enoyl-[acyl-carrier-pro 53.6 34 0.0012 26.8 6.6 90 96-186 6-149 (266)
435 3pi7_A NADH oxidoreductase; gr 53.4 8.5 0.00029 32.1 3.1 83 95-184 162-263 (349)
436 3pp8_A Glyoxylate/hydroxypyruv 53.0 3.9 0.00013 34.1 0.9 109 96-211 138-256 (315)
437 3pef_A 6-phosphogluconate dehy 52.6 9.6 0.00033 30.8 3.2 101 98-201 2-111 (287)
438 3is3_A 17BETA-hydroxysteroid d 52.6 25 0.00086 27.8 5.7 90 96-186 17-154 (270)
439 1qp8_A Formate dehydrogenase; 52.5 8.8 0.0003 31.7 3.0 101 96-204 123-229 (303)
440 4e12_A Diketoreductase; oxidor 52.5 13 0.00043 30.1 3.9 109 98-210 5-145 (283)
441 3l4b_C TRKA K+ channel protien 52.5 39 0.0013 25.7 6.6 82 98-184 1-99 (218)
442 3hwr_A 2-dehydropantoate 2-red 52.2 20 0.00069 29.5 5.1 99 95-200 17-134 (318)
443 2ew2_A 2-dehydropantoate 2-red 52.0 19 0.00064 29.0 4.9 103 98-205 4-127 (316)
444 2h78_A Hibadh, 3-hydroxyisobut 51.9 8.1 0.00028 31.4 2.6 98 98-201 4-113 (302)
445 4dcm_A Ribosomal RNA large sub 51.4 59 0.002 27.4 8.1 83 96-186 38-138 (375)
446 2ekl_A D-3-phosphoglycerate de 50.6 3.4 0.00012 34.4 0.1 103 95-205 140-252 (313)
447 1zkd_A DUF185; NESG, RPR58, st 49.9 23 0.00078 30.5 5.2 35 96-130 80-122 (387)
448 4e2x_A TCAB9; kijanose, tetron 49.6 57 0.0019 27.5 7.8 85 95-186 317-412 (416)
449 3e8x_A Putative NAD-dependent 49.0 30 0.001 26.5 5.5 58 96-155 20-91 (236)
450 3k5p_A D-3-phosphoglycerate de 48.9 10 0.00035 33.0 2.9 104 96-205 155-264 (416)
451 3dqp_A Oxidoreductase YLBE; al 48.5 29 0.00098 26.3 5.3 56 98-155 1-70 (219)
452 3c24_A Putative oxidoreductase 48.4 11 0.00039 30.3 3.0 81 98-181 12-98 (286)
453 4dll_A 2-hydroxy-3-oxopropiona 48.4 16 0.00056 30.1 4.0 100 96-201 30-140 (320)
454 1wwk_A Phosphoglycerate dehydr 48.3 3.7 0.00013 34.1 -0.0 101 96-204 141-251 (307)
455 3r3s_A Oxidoreductase; structu 48.2 35 0.0012 27.5 5.9 90 96-186 48-187 (294)
456 3ew7_A LMO0794 protein; Q8Y8U8 47.9 82 0.0028 23.3 8.1 85 98-184 1-102 (221)
457 1pjc_A Protein (L-alanine dehy 47.8 1.5 5.1E-05 37.3 -2.6 88 97-185 167-268 (361)
458 4dgs_A Dehydrogenase; structur 47.3 16 0.00055 30.8 3.8 103 96-204 170-277 (340)
459 2g5c_A Prephenate dehydrogenas 46.9 59 0.002 25.7 7.1 102 98-206 2-116 (281)
460 4e5n_A Thermostable phosphite 46.2 12 0.0004 31.4 2.7 102 96-205 144-256 (330)
461 3zwc_A Peroxisomal bifunctiona 46.2 77 0.0026 29.6 8.5 115 97-221 316-463 (742)
462 1dxy_A D-2-hydroxyisocaproate 45.4 19 0.00065 30.1 3.9 104 96-205 144-253 (333)
463 3ksu_A 3-oxoacyl-acyl carrier 45.3 35 0.0012 26.9 5.4 89 96-185 10-148 (262)
464 3dmg_A Probable ribosomal RNA 45.3 91 0.0031 26.4 8.3 98 96-200 45-153 (381)
465 3pdu_A 3-hydroxyisobutyrate de 44.9 12 0.0004 30.3 2.5 101 98-201 2-111 (287)
466 3arc_M Photosystem II reaction 44.8 18 0.00061 19.9 2.4 29 1-29 1-29 (36)
467 1m6y_A S-adenosyl-methyltransf 44.5 12 0.00042 30.8 2.6 37 163-201 224-260 (301)
468 4ezb_A Uncharacterized conserv 44.5 92 0.0032 25.4 8.1 99 97-202 24-138 (317)
469 2aef_A Calcium-gated potassium 44.3 89 0.003 23.9 7.6 86 95-186 7-107 (234)
470 3iyl_W VP1; non-enveloped viru 44.1 29 0.00099 34.2 5.3 85 97-183 828-932 (1299)
471 3k6j_A Protein F01G10.3, confi 43.7 45 0.0016 29.3 6.2 108 96-211 53-191 (460)
472 3doj_A AT3G25530, dehydrogenas 43.5 15 0.00052 30.0 3.0 103 96-201 20-131 (310)
473 1zcj_A Peroxisomal bifunctiona 43.3 80 0.0027 27.5 7.8 105 97-210 37-174 (463)
474 1vpd_A Tartronate semialdehyde 43.2 12 0.00043 30.1 2.4 102 98-202 6-116 (299)
475 4f3n_A Uncharacterized ACR, CO 43.1 23 0.00079 30.9 4.2 34 97-130 138-177 (432)
476 1wma_A Carbonyl reductase [NAD 42.8 37 0.0013 26.3 5.2 88 96-185 3-139 (276)
477 4hp8_A 2-deoxy-D-gluconate 3-d 42.6 58 0.002 25.9 6.3 59 96-155 8-86 (247)
478 3u5t_A 3-oxoacyl-[acyl-carrier 42.6 35 0.0012 27.1 5.0 90 95-185 25-162 (267)
479 1qsg_A Enoyl-[acyl-carrier-pro 42.5 1.2E+02 0.004 23.6 8.8 59 96-155 8-94 (265)
480 3qy9_A DHPR, dihydrodipicolina 42.3 83 0.0028 24.9 7.2 91 98-202 4-101 (243)
481 3mag_A VP39; methylated adenin 41.8 46 0.0016 27.5 5.6 35 96-130 60-99 (307)
482 2dpo_A L-gulonate 3-dehydrogen 41.4 13 0.00046 30.8 2.4 111 97-211 6-148 (319)
483 3d1l_A Putative NADP oxidoredu 40.6 30 0.001 27.3 4.3 80 97-181 10-99 (266)
484 1jdm_A Sarcolipin; helix, memb 40.2 7.1 0.00024 20.3 0.3 20 1-20 1-20 (31)
485 3uce_A Dehydrogenase; rossmann 39.7 33 0.0011 26.1 4.4 84 96-186 5-118 (223)
486 2g1u_A Hypothetical protein TM 39.1 22 0.00074 25.6 3.0 87 95-184 17-118 (155)
487 3h2s_A Putative NADH-flavin re 38.9 94 0.0032 23.1 6.9 84 98-183 1-103 (224)
488 3me5_A Cytosine-specific methy 38.5 20 0.00068 31.8 3.1 46 97-142 88-146 (482)
489 1mx3_A CTBP1, C-terminal bindi 38.0 11 0.00036 32.0 1.2 106 96-206 167-280 (347)
490 4gx0_A TRKA domain protein; me 37.8 1.4E+02 0.0048 26.4 8.7 84 98-186 349-444 (565)
491 3ba1_A HPPR, hydroxyphenylpyru 37.8 10 0.00036 31.8 1.1 101 96-204 163-270 (333)
492 3oh8_A Nucleoside-diphosphate 37.7 71 0.0024 28.0 6.7 57 97-155 147-208 (516)
493 3n58_A Adenosylhomocysteinase; 37.7 7.5 0.00026 34.3 0.2 86 94-188 244-337 (464)
494 3jtm_A Formate dehydrogenase, 37.5 27 0.00091 29.5 3.6 99 96-205 163-276 (351)
495 3i6i_A Putative leucoanthocyan 37.5 58 0.002 26.5 5.8 58 97-156 10-91 (346)
496 2pi1_A D-lactate dehydrogenase 36.8 13 0.00045 31.2 1.6 100 97-205 141-250 (334)
497 1yb4_A Tartronic semialdehyde 36.5 65 0.0022 25.6 5.8 101 98-202 4-113 (295)
498 2yjg_A Lactate racemase apopro 42.7 7.4 0.00025 34.1 0.0 53 147-199 275-332 (436)
499 4g2n_A D-isomer specific 2-hyd 36.3 13 0.00045 31.4 1.5 101 96-205 172-283 (345)
500 3hg7_A D-isomer specific 2-hyd 36.1 6.2 0.00021 33.1 -0.5 104 96-205 139-250 (324)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.73 E-value=1.1e-17 Score=139.19 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~ 165 (229)
..+.+|||||||+|..+..+++.+. +|+|+|+|+. .+.++++|++++|+++++||+|++....|+.++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~ 116 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDR 116 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHH
Confidence 4567999999999999999999975 9999999976 34589999999999999999999998888889999
Q ss_pred HHHHHHhccccCcEEEEEeec
Q 027039 166 FVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 166 ~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++++.|+|||||.++++...
T Consensus 117 ~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 117 FWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEEECC
Confidence 999999999999999876654
No 2
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.72 E-value=1.6e-16 Score=127.85 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=108.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCC--CCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g--~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.+.++.+|||+|||+|..+..+++.+ ..+++|+|+++. .+.++.+|+.++++++++||+|+++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEee
Confidence 45788999999999999999999873 459999999975 3668999999999989999999999
Q ss_pred cchhhh-CHHHHHHHHHhccccCcEEEEEeecC----------CcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEe
Q 027039 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC----------AGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 156 ~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~----------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
.+.++. ++..+++++.++|||||.+++..... ..++..++.+++...+|..+......+.. ..++.++
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~~k 192 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYC-FGVYAMI 192 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTE-EEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCce-EEEEEEe
Confidence 888888 89999999999999999998765332 13357889999999999888876666654 4555555
Q ss_pred c
Q 027039 225 T 225 (229)
Q Consensus 225 ~ 225 (229)
.
T Consensus 193 ~ 193 (219)
T 3dh0_A 193 V 193 (219)
T ss_dssp C
T ss_pred c
Confidence 3
No 3
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.72 E-value=5.9e-17 Score=129.07 Aligned_cols=129 Identities=12% Similarity=0.073 Sum_probs=108.4
Q ss_pred CCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh---CH
Q 027039 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL---FP 163 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~---~~ 163 (229)
+.+|||+|||+|.++..+++.+. +++|+|+++. .+.++++|+.++++++++||+|+++.+.++. ++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHH
Confidence 88999999999999999999976 9999999976 4669999999999889999999999887777 67
Q ss_pred HHHHHHHHhccccCcEEEEEeecCCc-------------ccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEeccC
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEECAG-------------REIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRTRL 227 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~~~~-------------~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (229)
..+++++.++|||||.+++.+..... .+..++.+++...+|..+......+ ...-.+....++
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~p~~~l~~~~~~ 196 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR-FPHAYLTAEASL 196 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT-SSEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC-Ccchhhhhhhhh
Confidence 99999999999999999988755432 4678999999999998887766666 555555555444
No 4
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.8e-16 Score=126.30 Aligned_cols=126 Identities=18% Similarity=0.153 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHHHhcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTV 174 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~L 174 (229)
.++.+|||||||+|..+..++ .+++|+|+++..+.++++|+.++++++++||+|+++.+.++.++..+++++.++|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L 141 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVL 141 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHE
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhC
Confidence 678899999999999988873 4999999999999999999999999889999999987776558999999999999
Q ss_pred ccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEec
Q 027039 175 KIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRT 225 (229)
Q Consensus 175 kpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (229)
||||.+++........+..++.+++...+|..+......+ ....++++|.
T Consensus 142 ~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~~~~~~~~k~ 191 (215)
T 2zfu_A 142 KPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNS-HFFLFDFQKT 191 (215)
T ss_dssp EEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCST-TCEEEEEEEC
T ss_pred CCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCC-eEEEEEEEec
Confidence 9999998765554445778899999999998766443333 3356666664
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.70 E-value=5e-17 Score=130.24 Aligned_cols=122 Identities=11% Similarity=0.108 Sum_probs=99.1
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
..+++ +|||+|||+|..+..+++.+..+++|+|+++. .+.++++|+.++++++++||+|+++.
T Consensus 41 ~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 41 GITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp CCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 34455 99999999999999999884459999999875 35689999999999999999999998
Q ss_pred chhhh-CHHHHHHHHHhccccCcEEEEEeec---------------------------CCcccHHHHHHHHhcCceeEee
Q 027039 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE---------------------------CAGREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 157 ~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~---------------------------~~~~~~~~l~~l~~~~~~~~~~ 208 (229)
+.++. ++.++++++.++|||||.+++.... ...++..++.++++..+|..+.
T Consensus 120 ~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 120 SVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred hHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 88888 8999999999999999998876322 1222446788889988888776
Q ss_pred eeeecCC
Q 027039 209 NVTVNGS 215 (229)
Q Consensus 209 ~~~~~~~ 215 (229)
.....+.
T Consensus 200 ~~~~~~~ 206 (219)
T 3dlc_A 200 IILGDEG 206 (219)
T ss_dssp EEEETTE
T ss_pred EEecCCc
Confidence 6655544
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.69 E-value=2.4e-16 Score=130.39 Aligned_cols=91 Identities=29% Similarity=0.422 Sum_probs=80.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
...++.+|||||||+|.++..+++.+. +++|+|+++. .+.++++|+.++|+++++||+|+++..
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 346889999999999999999999864 9999999975 356899999999999999999999988
Q ss_pred hhhh-CHHHHHHHHHhccccCcEEEEEe
Q 027039 158 AEAL-FPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 158 ~~~~-~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.++. ++..+++++.++|||||.+++..
T Consensus 113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 113 AHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 8888 89999999999999999998764
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.69 E-value=2.9e-16 Score=128.12 Aligned_cols=117 Identities=21% Similarity=0.275 Sum_probs=100.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL- 161 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~- 161 (229)
+++.+|||||||+|..+..+++.+. +++|+|+++. .+.++++|+.++++++++||+|++.++.+|.
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 6889999999999999999999976 9999999875 4568999999999989999999999988888
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecCC-------------------cccHHHHHHHHhcCceeEeeeeee
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~~-------------------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
++.++++++.++|||||.+++.+.... ..+..++.+++...+|..+.....
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 899999999999999999998874322 135567889999998887775533
No 8
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.69 E-value=4.8e-16 Score=129.19 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=100.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.++++.+|||||||+|..+..+++.+..+|+|+|+++. .+.++.+|+.++++++++||+|+++.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 35789999999999999999999996669999999976 26799999999998899999999998
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecC------------------CcccHHHHHHHHhcCceeEeeeeee
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEEC------------------AGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~------------------~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+.++.++.++++++.++|||||.+++..... .-.+..++.+++...+|..+.....
T Consensus 123 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (267)
T 3kkz_A 123 AIYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFIL 196 (267)
T ss_dssp CGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEEC
T ss_pred CceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 8888899999999999999999999776431 1124567778888888887765443
No 9
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.68 E-value=5.3e-16 Score=127.75 Aligned_cols=117 Identities=15% Similarity=0.230 Sum_probs=99.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------CCeEEEcCCCCCCCCCCceeEEEcccchhhh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL 161 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~ 161 (229)
..++.+|||||||+|..+..+++.+..+++|+|+++. .+.++.+|+.++++++++||+|+++.+.++.
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 42 DFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 3578999999999999999999997669999999975 4568999999999989999999999988888
Q ss_pred -CHHHHHHHHHhccccCcEEEEEeecCC---------------c----------------------------ccHHHHHH
Q 027039 162 -FPSRFVGEMERTVKIGGVCMVLMEECA---------------G----------------------------REIKQIVE 197 (229)
Q Consensus 162 -~~~~~l~~~~~~LkpgG~lil~~~~~~---------------~----------------------------~~~~~l~~ 197 (229)
++.++++++.++|||||.+++.+.... . .+..++.+
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 201 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQ 201 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHH
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHH
Confidence 899999999999999999998643210 0 16788999
Q ss_pred HHhcCceeEeeee
Q 027039 198 LFRTSRFVDAANV 210 (229)
Q Consensus 198 l~~~~~~~~~~~~ 210 (229)
++...+|..+.-.
T Consensus 202 ~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 202 TLLKNGFQINSVI 214 (253)
T ss_dssp HHHHTTEEEEEEE
T ss_pred HHHHcCCeeeeee
Confidence 9999998876654
No 10
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.68 E-value=2.4e-16 Score=128.63 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
.++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.++ +++++||+|++.++.+|. +
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcC
Confidence 4778999999999999999999876 9999999976 456889999887 467899999999999988 8
Q ss_pred HHHHHHHHH-hccccCcEEEEEeecCC------------------------------cccHHHHHHHHhcCceeEeee
Q 027039 163 PSRFVGEME-RTVKIGGVCMVLMEECA------------------------------GREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 163 ~~~~l~~~~-~~LkpgG~lil~~~~~~------------------------------~~~~~~l~~l~~~~~~~~~~~ 209 (229)
+.++++++. ++|||||.+++.+.... ..+..++.++++..+|..+..
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 999999999 99999999998875422 235667888888877766553
No 11
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=3.4e-16 Score=128.89 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=97.2
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
..++++.+|||||||+|..+..+++. +. +++|+|+++. .+.++++|+.++++ +++||+|++
T Consensus 32 ~~~~~~~~VLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~ 109 (256)
T 1nkv_A 32 LRMKPGTRILDLGSGSGEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAAC 109 (256)
T ss_dssp TCCCTTCEEEEETCTTCHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEE
T ss_pred cCCCCCCEEEEECCCCCHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEE
Confidence 35678999999999999999999987 55 9999999974 36799999999887 889999999
Q ss_pred ccchhhh-CHHHHHHHHHhccccCcEEEEEeecC-------------------CcccHHHHHHHHhcCceeEeeee
Q 027039 155 AHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEEC-------------------AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 155 ~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~-------------------~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
..+.++. ++.++++++.++|||||++++..... ...+..++.+++...+|..+...
T Consensus 110 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 110 VGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp ESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred CCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 9888888 89999999999999999999765431 12245678888888888766543
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.68 E-value=1.1e-15 Score=123.09 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCCCCCC
Q 027039 79 TSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDE 147 (229)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~ 147 (229)
..+..++..+. ..++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++.+|+.+++++ +
T Consensus 32 ~~~~~~l~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~ 105 (220)
T 3hnr_A 32 AHYEDILEDVV----NKSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-T 105 (220)
T ss_dssp TTHHHHHHHHH----HTCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-S
T ss_pred HHHHHHHHHhh----ccCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-C
Confidence 34444544442 25789999999999999999999965 9999999986 467999999999887 9
Q ss_pred ceeEEEcccchhhh-CHHH--HHHHHHhccccCcEEEEEeecCCc----------------------------ccHHHHH
Q 027039 148 AFDVAFTAHLAEAL-FPSR--FVGEMERTVKIGGVCMVLMEECAG----------------------------REIKQIV 196 (229)
Q Consensus 148 ~fD~V~~~~~~~~~-~~~~--~l~~~~~~LkpgG~lil~~~~~~~----------------------------~~~~~l~ 196 (229)
+||+|+++.+.++. ++.. +++++.++|||||.+++....... .+..++.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 99999999988888 5555 999999999999999987543211 1457788
Q ss_pred HHHhcCceeEeeeeeecCC
Q 027039 197 ELFRTSRFVDAANVTVNGS 215 (229)
Q Consensus 197 ~l~~~~~~~~~~~~~~~~~ 215 (229)
++++..+| ++..+...+.
T Consensus 186 ~~l~~aGf-~v~~~~~~~~ 203 (220)
T 3hnr_A 186 TIFENNGF-HVTFTRLNHF 203 (220)
T ss_dssp HHHHHTTE-EEEEEECSSS
T ss_pred HHHHHCCC-EEEEeeccce
Confidence 89999999 4555544443
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.68 E-value=5.9e-16 Score=127.80 Aligned_cols=124 Identities=17% Similarity=0.252 Sum_probs=101.5
Q ss_pred HHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCcee
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFD 150 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD 150 (229)
...++....++++.+|||||||+|..+..+++. +. +|+|+|+++. .+.++++|+.+.++++++||
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEE
Confidence 344455556688999999999999999999997 65 9999999974 45689999999999899999
Q ss_pred EEEcccchhhh---CHHHHHHHHHhccccCcEEEEEeecCC-------------------cccHHHHHHHHhcCceeEee
Q 027039 151 VAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 151 ~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~~~-------------------~~~~~~l~~l~~~~~~~~~~ 208 (229)
+|+++.+.+|. ++..+++++.++|||||.+++...... ..+..++.+++...+|..+.
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 99999887776 578899999999999999998764322 23566788888888887665
Q ss_pred e
Q 027039 209 N 209 (229)
Q Consensus 209 ~ 209 (229)
.
T Consensus 203 ~ 203 (266)
T 3ujc_A 203 S 203 (266)
T ss_dssp E
T ss_pred E
Confidence 4
No 14
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.67 E-value=7.3e-16 Score=131.18 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=98.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
++++.+|||+|||+|.++..+++. +. +|+|+|+++. .+.++.+|+.++|+++++||+|+++.
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 678999999999999999999988 75 9999999976 36699999999999899999999998
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecCCc--------------------ccHHHHHHHHhcCceeEeeee
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAG--------------------REIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~--------------------~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+.++.++.++++++.++|||||++++....... .+..++.+++++.+|..+...
T Consensus 194 ~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 194 STMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp CGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred chhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 888889999999999999999999987644221 245677888888888766543
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.67 E-value=7.5e-16 Score=126.88 Aligned_cols=120 Identities=18% Similarity=0.244 Sum_probs=100.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.++++.+|||||||+|..+..+++.+..+|+|+|+++. .+.++++|+.++|+++++||+|+++.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 45788999999999999999999984349999999975 16799999999999899999999998
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecC------------------CcccHHHHHHHHhcCceeEeeeeee
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEEC------------------AGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~------------------~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+.++.++.++++++.++|||||.+++..... .-.+..++.+++...+|..+.....
T Consensus 123 ~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (257)
T 3f4k_A 123 AIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFIL 196 (257)
T ss_dssp CSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEEC
T ss_pred hHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 8888899999999999999999999876431 1224567788888888887775443
No 16
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.67 E-value=5.2e-16 Score=129.17 Aligned_cols=117 Identities=14% Similarity=0.054 Sum_probs=91.3
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe----------------------------------------
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------------------------------------- 133 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~---------------------------------------- 133 (229)
..++.+|||||||+|.++..++..+..+|+|+|+|+.+++
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 4678899999999999888777777768999999965222
Q ss_pred -----EEEcCCCC-CCCC---CCceeEEEcccchhhh-----CHHHHHHHHHhccccCcEEEEEeecCC-----------
Q 027039 134 -----VSRADPHN-LPFF---DEAFDVAFTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEECA----------- 188 (229)
Q Consensus 134 -----~~~~d~~~-~~~~---~~~fD~V~~~~~~~~~-----~~~~~l~~~~~~LkpgG~lil~~~~~~----------- 188 (229)
++++|+.+ .|++ +++||+|+++.+.++. ++.++++++.++|||||.+++......
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 77889887 3443 5799999999887764 346899999999999999998753221
Q ss_pred --cccHHHHHHHHhcCceeEeeee
Q 027039 189 --GREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 189 --~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
..+..++.+.+.+.+|..++..
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEe
Confidence 1367789999999888765543
No 17
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=2.1e-16 Score=126.67 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=88.1
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------------------CCeEEEcCCCCCCCC
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------------------LPLVSRADPHNLPFF 145 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------------------~~~~~~~d~~~~~~~ 145 (229)
.+.++.+|||+|||+|..+..+++.|. +|+|+|+|+. .+.++++|+.+++++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 346889999999999999999999987 9999999964 246889999999876
Q ss_pred C-CceeEEEcccchhhhC---HHHHHHHHHhccccCcEEEEEeecCC---------cccHHHHHHHHhcCcee
Q 027039 146 D-EAFDVAFTAHLAEALF---PSRFVGEMERTVKIGGVCMVLMEECA---------GREIKQIVELFRTSRFV 205 (229)
Q Consensus 146 ~-~~fD~V~~~~~~~~~~---~~~~l~~~~~~LkpgG~lil~~~~~~---------~~~~~~l~~l~~~~~~~ 205 (229)
+ ++||+|++..+.+++. ..++++++.++|||||++++++.... ..+..++.++|.. +|.
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEE
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcE
Confidence 5 8999999987666663 35689999999999998554543321 1356788888886 553
No 18
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.67 E-value=1.3e-15 Score=124.80 Aligned_cols=115 Identities=21% Similarity=0.309 Sum_probs=95.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
.++++.+|||||||+|..+..+++.+. +++|+|+++. .+.++++|+.++++++++||+|+++.+
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 457899999999999999999999865 9999999975 356899999999998999999999988
Q ss_pred hhhh-CHHHHHHHHHhccccCcEEEEEeecC----------------------CcccHHHHHHHHhcCceeEee
Q 027039 158 AEAL-FPSRFVGEMERTVKIGGVCMVLMEEC----------------------AGREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 158 ~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~----------------------~~~~~~~l~~l~~~~~~~~~~ 208 (229)
.++. ++..+++++.++|||||.+++..... ..++..++.+++...+|..+.
T Consensus 97 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 97 AHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQD 170 (239)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEE
T ss_pred hhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEE
Confidence 8888 89999999999999999998764332 123556677777777776444
No 19
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.67 E-value=9.3e-16 Score=127.53 Aligned_cols=125 Identities=22% Similarity=0.265 Sum_probs=99.1
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCC
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFF 145 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~ 145 (229)
.....+.....+.++.+|||||||+|..+..+++. +. +|+|+|+++. .+.++.+|+.++|++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 33444444445678999999999999999999886 54 9999999975 267899999999998
Q ss_pred CCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCC----------------------cccHHHHHHHHhcC
Q 027039 146 DEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA----------------------GREIKQIVELFRTS 202 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~----------------------~~~~~~l~~l~~~~ 202 (229)
+++||+|++..+.+|. ++.++++++.++|||||++++...... ..+..++.+++...
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHT
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHc
Confidence 9999999999888888 899999999999999999987763321 12345566677777
Q ss_pred ceeEee
Q 027039 203 RFVDAA 208 (229)
Q Consensus 203 ~~~~~~ 208 (229)
+|..+.
T Consensus 207 Gf~~~~ 212 (273)
T 3bus_A 207 ELVVTS 212 (273)
T ss_dssp TCEEEE
T ss_pred CCeEEE
Confidence 766544
No 20
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.66 E-value=5.1e-16 Score=124.44 Aligned_cols=115 Identities=18% Similarity=0.167 Sum_probs=96.0
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhh---
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL--- 161 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~--- 161 (229)
+.++.+|||+|||+|.++..+++.+. +++|+|+++. .+.++.+|+.+++ ++++||+|+++.+.++.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 46889999999999999999999976 9999999987 4558889999888 78999999999888877
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecCCc------------ccHHHHHHHHhcCc-eeEeeee
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEECAG------------REIKQIVELFRTSR-FVDAANV 210 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~~~------------~~~~~l~~l~~~~~-~~~~~~~ 210 (229)
++..+++++.++|||||.+++.+..... .+..++.+++...+ |..+...
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 4578999999999999999988765332 37788999999766 5554443
No 21
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.66 E-value=1e-15 Score=129.01 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=96.7
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.+.++.+|||||||+|..+..+++. +. +++|+|+++. .+.++.+|+.++|+++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 5578999999999999999999987 76 9999999976 2568999999999999999999999
Q ss_pred cchhhh-CHHHHHHHHHhccccCcEEEEEeecCC-------------------cccHHHHHHHHhcCceeEeee
Q 027039 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA-------------------GREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 156 ~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~-------------------~~~~~~l~~l~~~~~~~~~~~ 209 (229)
.+.+|. ++..+++++.++|||||.+++...... ..+..++.+++...+|..+..
T Consensus 158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 158 DAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 888888 899999999999999999998764321 114456667777777766554
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.66 E-value=1.4e-15 Score=127.54 Aligned_cols=114 Identities=13% Similarity=0.186 Sum_probs=95.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCC-CCCCceeEEEcccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLP-FFDEAFDVAFTAHL 157 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~-~~~~~fD~V~~~~~ 157 (229)
.++.+|||||||+|..+..+++.+. +|+|+|+++. .+.++++|+.+++ +.+++||+|+++.+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 3478999999999999999999976 9999999974 3558999999987 77899999999998
Q ss_pred hhhh-CHHHHHHHHHhccccCcEEEEEeecC-------------------------------CcccHHHHHHHHhcCcee
Q 027039 158 AEAL-FPSRFVGEMERTVKIGGVCMVLMEEC-------------------------------AGREIKQIVELFRTSRFV 205 (229)
Q Consensus 158 ~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~-------------------------------~~~~~~~l~~l~~~~~~~ 205 (229)
.++. ++.++++++.++|||||.+++..... ...+..++.+++...+|.
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 8888 89999999999999999999876421 123557888888888877
Q ss_pred Eeee
Q 027039 206 DAAN 209 (229)
Q Consensus 206 ~~~~ 209 (229)
.+..
T Consensus 226 v~~~ 229 (285)
T 4htf_A 226 IMGK 229 (285)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5543
No 23
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=2.1e-15 Score=118.45 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcc-cchhhh-
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTA-HLAEAL- 161 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~-~~~~~~- 161 (229)
++++.+|||+|||+|..+..+++.+. +++++|+++. .+.++.+|+.+.++++++||+|+++ .+.++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 47889999999999999999999865 9999999975 3678999999988888999999997 666665
Q ss_pred --CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 162 --FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 162 --~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+..++++++.++|||||.+++.......++..++.+.+...+|..+...
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeee
Confidence 2478999999999999999988887777788899999998888766544
No 24
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.65 E-value=3e-15 Score=121.22 Aligned_cols=115 Identities=22% Similarity=0.298 Sum_probs=98.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC--------------------CeEEEcCCCCCCCCCCceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------------PLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~--------------------~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
+++.+|||+|||+|..+..+++.+. +++|+|+++.+ +.++.+|+.++++++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 7899999999999999999999976 99999998751 46889999999988999999999
Q ss_pred ccchhhh-CHH---HHHHHHHhccccCcEEEEEeecC--------------------------------------CcccH
Q 027039 155 AHLAEAL-FPS---RFVGEMERTVKIGGVCMVLMEEC--------------------------------------AGREI 192 (229)
Q Consensus 155 ~~~~~~~-~~~---~~l~~~~~~LkpgG~lil~~~~~--------------------------------------~~~~~ 192 (229)
+.+.++. ++. ++++++.++|||||.+++..... ..++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTE 187 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCH
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCH
Confidence 9888888 777 89999999999999998774321 13467
Q ss_pred HHHHHHHhcCceeEeeee
Q 027039 193 KQIVELFRTSRFVDAANV 210 (229)
Q Consensus 193 ~~l~~l~~~~~~~~~~~~ 210 (229)
.++.++++..+|..+.-.
T Consensus 188 ~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 188 KELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEE
Confidence 889999998888776653
No 25
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=6.4e-16 Score=127.34 Aligned_cols=98 Identities=17% Similarity=0.186 Sum_probs=84.7
Q ss_pred HHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.++......++.+|||||||+|..+..+++. +..+++|+|+++. .+.++.+|+.+++ ++++||+|+++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 102 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYAN 102 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEe
Confidence 3444444578899999999999999999988 4459999999975 4678999999988 78899999999
Q ss_pred cchhhh-CHHHHHHHHHhccccCcEEEEEee
Q 027039 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 156 ~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
.+.++. ++..+++++.++|||||.+++.+.
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 888888 899999999999999999998765
No 26
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.65 E-value=1.3e-15 Score=117.94 Aligned_cols=126 Identities=11% Similarity=0.113 Sum_probs=102.3
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
+.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.+..+| .++++++||+|+++.+.++. +
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcccC
Confidence 47888999999999999999999975 9999999976 46677777 77788999999999888888 8
Q ss_pred HHHHHHHHHhccccCcEEEEEeecCC----------cccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEecc
Q 027039 163 PSRFVGEMERTVKIGGVCMVLMEECA----------GREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRTR 226 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~~~~----------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (229)
+..+++++.++|||||.+++...... ..+..++.+++. +|..++........ ..+++.+++
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~-~~l~~~~~~ 161 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYH-FGLVLKRKT 161 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTE-EEEEEEECC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCce-EEEEEecCC
Confidence 99999999999999999997754322 235678888888 88877766666565 455555544
No 27
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=3.4e-16 Score=130.95 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=81.3
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
..++.+|||||||+|.++..+++.+ .+|+|+|+++. .+.++.+|+.++++ +++||+|+++.+.++. +
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d 132 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKE 132 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCcC
Confidence 4678999999999999999999965 49999999976 46699999999987 6899999999888887 8
Q ss_pred HHHHHHHHHhccccCcEEEEEeec
Q 027039 163 PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+..+++++.++|||||.+++.+..
T Consensus 133 ~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 133 PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecC
Confidence 999999999999999999987665
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.64 E-value=6.6e-15 Score=117.96 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=97.5
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL- 161 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~- 161 (229)
+.++.+|||||||+|..+..+++.+. +++|+|+++. .+.++++|+.++ +++++||+|+++.+.++.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 57788999999999999999999866 9999999874 466899999988 778999999999988888
Q ss_pred CH--HHHHHHHHhccccCcEEEEEeecCC-------------------------------cccHHHHHHHHhcCceeEee
Q 027039 162 FP--SRFVGEMERTVKIGGVCMVLMEECA-------------------------------GREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 162 ~~--~~~l~~~~~~LkpgG~lil~~~~~~-------------------------------~~~~~~l~~l~~~~~~~~~~ 208 (229)
++ ..+++++.++|||||.+++...... ..+..++.+++...+|. +.
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~-v~ 200 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWS-CS 200 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEE-EE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCE-EE
Confidence 44 7899999999999999988754221 12567888999999998 54
Q ss_pred eeeecCC
Q 027039 209 NVTVNGS 215 (229)
Q Consensus 209 ~~~~~~~ 215 (229)
.....+.
T Consensus 201 ~~~~~~~ 207 (218)
T 3ou2_A 201 VDEVHPG 207 (218)
T ss_dssp EEEEETT
T ss_pred eeecccc
Confidence 4444443
No 29
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=8.3e-16 Score=127.57 Aligned_cols=92 Identities=21% Similarity=0.176 Sum_probs=81.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
...++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.++++++++||+|+++++.+|. +
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 109 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSH 109 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSS
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccC
Confidence 347889999999999999999998764 9999999975 3468999999999999999999999988888 8
Q ss_pred HHHHHHHHHhccccCcEEEEEeec
Q 027039 163 PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.++++++.++|| ||.+++....
T Consensus 110 ~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 110 LEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHHHHHhC-CcEEEEEEcC
Confidence 9999999999999 9977766544
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.64 E-value=1e-15 Score=127.61 Aligned_cols=95 Identities=23% Similarity=0.358 Sum_probs=83.9
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEc
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
...+.++.+|||||||+|.++..+++. +..+++|+|+++. .+.++.+|+.++++++++||+|++
T Consensus 32 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 32 DTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp TCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred cccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 345678999999999999999999988 3569999999864 366889999999998999999999
Q ss_pred ccchhhh-CHHHHHHHHHhccccCcEEEEEee
Q 027039 155 AHLAEAL-FPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 155 ~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+.+.++. ++..+++++.++|||||.+++...
T Consensus 112 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 112 CFVLEHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echhhhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9888888 899999999999999999987653
No 31
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=3.3e-16 Score=138.39 Aligned_cols=139 Identities=12% Similarity=0.128 Sum_probs=105.2
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe--------EE-----EcCCCCCCCCCCcee
Q 027039 84 FFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------VS-----RADPHNLPFFDEAFD 150 (229)
Q Consensus 84 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~--------~~-----~~d~~~~~~~~~~fD 150 (229)
....++....++++.+|||||||+|.++..+++.+. +++|+|+++.+++ .. ..+...+++++++||
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD 173 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPAN 173 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEE
Confidence 334444444567889999999999999999999977 9999999976432 22 233334556678999
Q ss_pred EEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeec-----------------CCcccHHHHHHHHhcCceeEeeeeee
Q 027039 151 VAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE-----------------CAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 151 ~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~-----------------~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+|+++++.+|+ ++..+++++.++|||||.+++.+.. ...++..++.+++.+.+|..+.....
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEc
Confidence 99999999999 9999999999999999999987653 11235678999999998877665543
Q ss_pred --cCCeeEEEEEE
Q 027039 213 --NGSNMTRILMR 223 (229)
Q Consensus 213 --~~~~~~~~~~~ 223 (229)
.|...+..+.+
T Consensus 254 ~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 254 PVHGGEVRYTLAR 266 (416)
T ss_dssp CGGGSEEEEEEEE
T ss_pred cCCCCEEEEEEEe
Confidence 46665555443
No 32
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=7.4e-16 Score=128.46 Aligned_cols=91 Identities=10% Similarity=0.180 Sum_probs=76.7
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC---CCCeEEEecCCCCC----------------CeEEEcCCCCCCCCCCceeE
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI---GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDV 151 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~---g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~ 151 (229)
...++++.+|||||||+|..+..+++. +..+|+|+|+|+.+ ++++++|+.++|+ +.||+
T Consensus 65 ~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~ 142 (261)
T 4gek_A 65 ERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASM 142 (261)
T ss_dssp HHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEE
T ss_pred HHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--ccccc
Confidence 345789999999999999999999876 23489999999863 4589999999887 46999
Q ss_pred EEcccchhhhCH---HHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFP---SRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~---~~~l~~~~~~LkpgG~lil~ 183 (229)
|+++.+.+++.+ .+++++++++|||||.+++.
T Consensus 143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 999988887743 46899999999999998865
No 33
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.63 E-value=4.9e-15 Score=120.42 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=95.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
..++.+|||+|||+|..+..+++. +..+++|+|+++. .+.++++|+.+++++ ++||+|+++.+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIH 120 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccc
Confidence 467899999999999999999988 3459999999975 356899999999876 8999999998888
Q ss_pred hhC-HH--HHHHHHHhccccCcEEEEEeecCC--------------------------------------cccHHHHHHH
Q 027039 160 ALF-PS--RFVGEMERTVKIGGVCMVLMEECA--------------------------------------GREIKQIVEL 198 (229)
Q Consensus 160 ~~~-~~--~~l~~~~~~LkpgG~lil~~~~~~--------------------------------------~~~~~~l~~l 198 (229)
+.. +. ++++++.++|||||.+++...... .++..++.++
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 884 33 599999999999999997653321 1244567778
Q ss_pred HhcCceeEeeeeee
Q 027039 199 FRTSRFVDAANVTV 212 (229)
Q Consensus 199 ~~~~~~~~~~~~~~ 212 (229)
++..+|..++....
T Consensus 201 l~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 201 LKEAGFRDVSCIYK 214 (234)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHcCCCceeeeee
Confidence 88899888876544
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.63 E-value=4.6e-16 Score=127.33 Aligned_cols=117 Identities=15% Similarity=0.171 Sum_probs=96.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-------CeEEEcCCCCC--CCCCCceeEEEcccchhhh-C
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------PLVSRADPHNL--PFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-------~~~~~~d~~~~--~~~~~~fD~V~~~~~~~~~-~ 162 (229)
.++++.+|||||||+|.++..+++.+. +|+|+|+++.+ +.++.+|..+. ++++++||+|+++.+.+|. +
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 357889999999999999999999876 89999999874 56888888775 7888999999999888888 4
Q ss_pred H--HHHHHHHHhccccCcEEEEEeecCC----------------cccHHHHHHHHhcCceeEeeee
Q 027039 163 P--SRFVGEMERTVKIGGVCMVLMEECA----------------GREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 163 ~--~~~l~~~~~~LkpgG~lil~~~~~~----------------~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+ ..+++++.++|||||.+++.+.... ..+..++.+++...+|..+...
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 4 8999999999999999998876533 2345678888888887755543
No 35
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.63 E-value=6.3e-15 Score=122.02 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEccc-chhhh--
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAH-LAEAL-- 161 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~-~~~~~-- 161 (229)
.++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.++++ +++||+|++.. +.+++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 5678999999999999999999975 9999999976 46699999999887 78999999986 77776
Q ss_pred --CHHHHHHHHHhccccCcEEEEE
Q 027039 162 --FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 162 --~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+..++++++.++|||||.+++.
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3467899999999999999874
No 36
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.62 E-value=6.1e-15 Score=121.56 Aligned_cols=93 Identities=18% Similarity=0.205 Sum_probs=82.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
.+.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++.+|+.++++++++||+|+++.+.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 457889999999999999999999865 9999999864 3568999999999889999999999888
Q ss_pred hhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 159 EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 ~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++. ++.++++++.++|||||.+++....
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEEecC
Confidence 888 8999999999999999999887444
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.61 E-value=3.6e-15 Score=121.59 Aligned_cols=117 Identities=17% Similarity=0.204 Sum_probs=98.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL- 161 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~- 161 (229)
.++.+|||||||+|..+..+++.+..+++|+|+++. .+.++.+|+.++++++++||+|++..+.++.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 578899999999999999999987669999999975 2568899999988888999999999888888
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecC----------------------C--------------------cccHHHHHHHH
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEEC----------------------A--------------------GREIKQIVELF 199 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~----------------------~--------------------~~~~~~l~~l~ 199 (229)
++.++++++.++|||||.+++.+... . ..+..++.+++
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l 201 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNAL 201 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHH
Confidence 89999999999999999999876320 0 02567888999
Q ss_pred hcCceeEeeeee
Q 027039 200 RTSRFVDAANVT 211 (229)
Q Consensus 200 ~~~~~~~~~~~~ 211 (229)
...+|..+....
T Consensus 202 ~~aGF~~~~~~~ 213 (243)
T 3bkw_A 202 IRSGFAIEHVEE 213 (243)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHcCCEeeeecc
Confidence 988887766543
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.61 E-value=1.7e-15 Score=124.42 Aligned_cols=124 Identities=14% Similarity=0.031 Sum_probs=99.5
Q ss_pred HhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 89 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
+......++.+|||||||+|..+..+++.+..+++++|+++. .+.++++|+.++++++++||+|++.
T Consensus 86 l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 165 (254)
T 1xtp_A 86 IASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQ 165 (254)
T ss_dssp HHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEE
T ss_pred HHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEc
Confidence 333344678999999999999999999886668999999876 2568899999988888999999999
Q ss_pred cchhhh---CHHHHHHHHHhccccCcEEEEEeecCC-------------cccHHHHHHHHhcCceeEeeeeee
Q 027039 156 HLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA-------------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 156 ~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~~~-------------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
.+.+++ ++.++++++.++|||||.+++...... ..+..++.+++...+|..++....
T Consensus 166 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 166 WTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 888877 368899999999999999998764211 125578889999888877665443
No 39
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.60 E-value=2.9e-15 Score=122.61 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=96.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------------CeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
+++.+|||||||+|..+..+++.+..+++|+|+++.+ +.++.+|+.++++++++||+|+++.+.+
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 4688999999999999999998865699999999762 4588999998888888999999998888
Q ss_pred hh-CH--HHHHHHHHhccccCcEEEEEeecCC------------cccHHHHHHHHhcCceeEeeeeee
Q 027039 160 AL-FP--SRFVGEMERTVKIGGVCMVLMEECA------------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 160 ~~-~~--~~~l~~~~~~LkpgG~lil~~~~~~------------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+. ++ .++++++.++|||||.+++...... ..+..++.+++...+|..+.....
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 88 44 3899999999999999997553211 126788999999888877665543
No 40
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.60 E-value=9.5e-15 Score=117.71 Aligned_cols=115 Identities=18% Similarity=0.271 Sum_probs=96.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC--------CeEEEcCCCC--CCCCCCceeEEEcccchhhh-CH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------PLVSRADPHN--LPFFDEAFDVAFTAHLAEAL-FP 163 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~--------~~~~~~d~~~--~~~~~~~fD~V~~~~~~~~~-~~ 163 (229)
.++.+|||+|||+|..+..+++.| .+++|+|+++.+ ..++.+|+.+ .++++++||+|+++.+.+|. ++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 578899999999999999999987 599999999763 4588899887 67778999999999888888 89
Q ss_pred HHHHHHHHhccccCcEEEEEeecC---------------------------CcccHHHHHHHHhcCceeEeeee
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEEC---------------------------AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~~---------------------------~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
.++++++.++|||||.+++.+... ..++..++.+++...+|..+...
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 999999999999999999876542 11357788888888888766544
No 41
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.60 E-value=9.3e-15 Score=113.87 Aligned_cols=127 Identities=13% Similarity=0.075 Sum_probs=99.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL------- 161 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~------- 161 (229)
.++.+|||+|||+|.++..+++.+ +|+|+|+++. .+.++++|+.+ ++++++||+|+++...+..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~ 98 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALESHRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIG 98 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHTCSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTB
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhcccCCeEEECChhh-hcccCCCCEEEECCCCccCCcccccc
Confidence 467799999999999999999997 9999999986 45699999988 6667899999998544432
Q ss_pred ---CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEeccC
Q 027039 162 ---FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRTRL 227 (229)
Q Consensus 162 ---~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (229)
+..++++++.+.+ |||.+++.... .....++.++++..+|..+.-........+.+..+..|+
T Consensus 99 ~~~~~~~~~~~~~~~l-pgG~l~~~~~~--~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~~~ 164 (170)
T 3q87_B 99 GGYLGREVIDRFVDAV-TVGMLYLLVIE--ANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKS 164 (170)
T ss_dssp CCGGGCHHHHHHHHHC-CSSEEEEEEEG--GGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEECC
T ss_pred CCcchHHHHHHHHhhC-CCCEEEEEEec--CCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEEecc
Confidence 1357888888888 99999877655 346678889999888877666655444457777776665
No 42
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.60 E-value=9e-15 Score=117.79 Aligned_cols=89 Identities=17% Similarity=0.096 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------------CCeEEEcCCCCCCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------------~~~~~~~d~~~~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|.++..+++. +..+++|+|+++. .+.++++|+...++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 57889999999999999999998 4469999999975 35688999988888789999999
Q ss_pred cccchhhh-CH--HHHHHHHHhccccCcEEEEE
Q 027039 154 TAHLAEAL-FP--SRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~~~~~-~~--~~~l~~~~~~LkpgG~lil~ 183 (229)
++.+.+++ ++ .++++++.++|||||.++..
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 99988888 44 58999999999999965533
No 43
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=4.8e-15 Score=129.87 Aligned_cols=117 Identities=18% Similarity=0.223 Sum_probs=96.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC-----------------------CCeEEEcCCCCC------
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-----------------------LPLVSRADPHNL------ 142 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~-----------------------~~~~~~~d~~~~------ 142 (229)
..++.+|||||||+|..+..+++. +..+|+|+|+++. .+.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 468899999999999999999886 3459999999863 456899999987
Q ss_pred CCCCCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCC--------------------cccHHHHHHHHhc
Q 027039 143 PFFDEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECA--------------------GREIKQIVELFRT 201 (229)
Q Consensus 143 ~~~~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~--------------------~~~~~~l~~l~~~ 201 (229)
++++++||+|+++.+.++. ++..+++++.++|||||.+++...... ..+..++.+++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 8889999999999888888 899999999999999999987643321 1355788899998
Q ss_pred CceeEeeee
Q 027039 202 SRFVDAANV 210 (229)
Q Consensus 202 ~~~~~~~~~ 210 (229)
.+|..++.+
T Consensus 241 aGF~~v~~~ 249 (383)
T 4fsd_A 241 AGFRDVRLV 249 (383)
T ss_dssp TTCCCEEEE
T ss_pred CCCceEEEE
Confidence 888655443
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=4.7e-15 Score=122.97 Aligned_cols=106 Identities=18% Similarity=0.150 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------------------------CCeEEEcCCCCC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------------------------LPLVSRADPHNL 142 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------------------------~~~~~~~d~~~~ 142 (229)
.++.+|||+|||+|..+..|++.|+ +|+|+|+|+. .+.++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5788999999999999999999988 9999999965 135788999998
Q ss_pred CCCC-CceeEEEcccchhhh---CHHHHHHHHHhccccCcEEEEEeecCC---------cccHHHHHHHHhc
Q 027039 143 PFFD-EAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA---------GREIKQIVELFRT 201 (229)
Q Consensus 143 ~~~~-~~fD~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~~~---------~~~~~~l~~l~~~ 201 (229)
++++ ++||+|++..+.+++ ....+++++.++|||||++++++-... ..+..++.++|..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~ 217 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT 217 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC
Confidence 8764 899999988666665 346799999999999999875542211 2466788899885
No 45
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=5.7e-15 Score=122.36 Aligned_cols=91 Identities=20% Similarity=0.287 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC---------eEEEcCCCCCCCCCCceeEEEcccchhhh--CH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------LVSRADPHNLPFFDEAFDVAFTAHLAEAL--FP 163 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~---------~~~~~d~~~~~~~~~~fD~V~~~~~~~~~--~~ 163 (229)
.++.+|||||||+|..+..+++.+. +++|+|+++.++ .++.+|+.++++++++||+|++.....+. ++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 4788999999999999999999876 999999998632 38899999999988999999998644443 78
Q ss_pred HHHHHHHHhccccCcEEEEEeec
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.++++++.++|||||.+++.+..
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999999999999987765
No 46
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.59 E-value=5.8e-15 Score=124.14 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe-----------------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL----------------------------------------- 133 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~----------------------------------------- 133 (229)
.++.+|||||||+|.....++..+..+|+|+|+|+.+++
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999655444443459999999987542
Q ss_pred ----EEEcCCCC-CCC-----CCCceeEEEcccchhh----h-CHHHHHHHHHhccccCcEEEEEeecC-----------
Q 027039 134 ----VSRADPHN-LPF-----FDEAFDVAFTAHLAEA----L-FPSRFVGEMERTVKIGGVCMVLMEEC----------- 187 (229)
Q Consensus 134 ----~~~~d~~~-~~~-----~~~~fD~V~~~~~~~~----~-~~~~~l~~~~~~LkpgG~lil~~~~~----------- 187 (229)
++++|+.+ +|+ ++++||+|+++.+.++ . ++.++++++.++|||||.+++.....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 34448877 664 3467999999988887 5 67899999999999999999763211
Q ss_pred --CcccHHHHHHHHhcCceeEeeee
Q 027039 188 --AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 188 --~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
...+..++.+++...+|..+...
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEee
Confidence 12467889999998888665543
No 47
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.59 E-value=8.8e-15 Score=122.77 Aligned_cols=94 Identities=15% Similarity=0.254 Sum_probs=80.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC----------------CeEEEcCCCCCCC-CCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPF-FDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~-~~~~fD~V~~~ 155 (229)
.+.++.+|||||||+|..+..++..+..+++|+|+++.+ +.++++|+.+.++ ++++||+|++.
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEEC
Confidence 457899999999999999999888876799999999762 4688999999887 68899999998
Q ss_pred cchhh----h-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 HLAEA----L-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ~~~~~----~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.+.++ . ++.++++++.++|||||.+++.+..
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 76655 3 5688999999999999999987654
No 48
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.59 E-value=1.1e-14 Score=116.45 Aligned_cols=89 Identities=28% Similarity=0.263 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-CH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FP 163 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~~ 163 (229)
.++.+|||+|||+|..+..+ +..+++|+|+++. .+.++++|+.++++++++||+|+++++.++. ++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 48899999999999999888 4459999999976 4568999999999988999999999888888 89
Q ss_pred HHHHHHHHhccccCcEEEEEeec
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.++++++.++|||||.+++.+..
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEecC
Confidence 99999999999999999988755
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.59 E-value=6.9e-15 Score=124.73 Aligned_cols=131 Identities=18% Similarity=0.151 Sum_probs=102.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHH--hCCCCeEEEecCCCCC----------------CeEEEcCCCCCCCCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFN--SIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~--~~g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
.++++.+|||||||+|..+..++ ..+..+|+|+|+++.+ +.++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 35789999999999999999995 3355699999999761 66999999999887 99999999
Q ss_pred ccchhhh-CHHH---HHHHHHhccccCcEEEEEeecC------------------------------------CcccHHH
Q 027039 155 AHLAEAL-FPSR---FVGEMERTVKIGGVCMVLMEEC------------------------------------AGREIKQ 194 (229)
Q Consensus 155 ~~~~~~~-~~~~---~l~~~~~~LkpgG~lil~~~~~------------------------------------~~~~~~~ 194 (229)
+.+.++. ++.. +++++.++|||||.+++..... .-++..+
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 9888887 7755 7999999999999998765221 0146788
Q ss_pred HHHHHhcCceeEeeeeeecCCeeEEEEEEe
Q 027039 195 IVELFRTSRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 195 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
+.++++..+|..++...........++.+|
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 999999999988777654444334444443
No 50
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.59 E-value=2.9e-14 Score=116.15 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEccc-chh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAH-LAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~-~~~ 159 (229)
.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++++|+.+++++ ++||+|+++. +.+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccc
Confidence 4788999999999999999999875 9999999976 366889999988876 8999999987 777
Q ss_pred hh----CHHHHHHHHHhccccCcEEEEEe
Q 027039 160 AL----FPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 160 ~~----~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
|. ++.++++++.++|||||.+++.+
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 76 35789999999999999998744
No 51
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.59 E-value=9e-15 Score=115.54 Aligned_cols=113 Identities=18% Similarity=0.222 Sum_probs=92.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++.+|+.+.++ +++||+|+++.+.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGG
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhh
Confidence 4678999999999999999999976 9999999875 35688999999887 88999999998777
Q ss_pred hh---CHHHHHHHHHhccccCcEEEEEeecC-----------CcccHHHHHHHHhcCceeEeee
Q 027039 160 AL---FPSRFVGEMERTVKIGGVCMVLMEEC-----------AGREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 160 ~~---~~~~~l~~~~~~LkpgG~lil~~~~~-----------~~~~~~~l~~l~~~~~~~~~~~ 209 (229)
+. ++.++++++.++|||||.++++.... ...+..++.++|...+.+...+
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~ 172 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNE 172 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTTSEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcCCeEEEecc
Confidence 76 46889999999999999988665321 1236678888988866665544
No 52
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.58 E-value=4.7e-14 Score=112.00 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=85.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C--CCeEEEecCCCC----CCeEEEcCCCCCC----------------------
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G--VADVTGVELMDS----LPLVSRADPHNLP---------------------- 143 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g--~~~v~~vD~s~~----~~~~~~~d~~~~~---------------------- 143 (229)
.++++.+|||+|||+|.++..+++. + ..+|+|+|+++. .+.++++|+.+.+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 19 FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHH
Confidence 4578899999999999999999987 5 469999999986 3678999998876
Q ss_pred ---CCCCceeEEEcccchhh-----hCH-------HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEee
Q 027039 144 ---FFDEAFDVAFTAHLAEA-----LFP-------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 144 ---~~~~~fD~V~~~~~~~~-----~~~-------~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~ 208 (229)
+++++||+|+++...++ .+. .++++++.++|||||.+++.+.. .....++...++. .+..+.
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~--~~~~~~l~~~l~~-~f~~v~ 175 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL--GSQTNNLKTYLKG-MFQLVH 175 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC--STTHHHHHHHHHT-TEEEEE
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC--CCCHHHHHHHHHH-HHheEE
Confidence 56789999999743222 121 24789999999999998875544 3345566666554 354444
Q ss_pred ee
Q 027039 209 NV 210 (229)
Q Consensus 209 ~~ 210 (229)
.+
T Consensus 176 ~~ 177 (201)
T 2plw_A 176 TT 177 (201)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 53
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.58 E-value=2.3e-14 Score=116.46 Aligned_cols=127 Identities=16% Similarity=0.122 Sum_probs=99.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEc-ccchhhh-C
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFT-AHLAEAL-F 162 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~-~~~~~~~-~ 162 (229)
.++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++.+|+.++++ +++||+|+| ..+.+++ +
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 6789999999999999999998865 9999999976 36789999999887 789999995 4466655 3
Q ss_pred ---HHHHHHHHHhccccCcEEEEEeecC----------------------------------------------------
Q 027039 163 ---PSRFVGEMERTVKIGGVCMVLMEEC---------------------------------------------------- 187 (229)
Q Consensus 163 ---~~~~l~~~~~~LkpgG~lil~~~~~---------------------------------------------------- 187 (229)
+.++++++.++|||||.+++.....
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHF 196 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEE
Confidence 4789999999999999988753110
Q ss_pred ------CcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEe
Q 027039 188 ------AGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 188 ------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
..++..++.+++...+| ++..+....+....++.+|
T Consensus 197 ~~~~~~~~~t~~~~~~ll~~aGF-~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 197 SDVHLITLFHQAEYEAAFTAAGL-RVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp EEEEEEECCCHHHHHHHHHHTTE-EEEEESSTTTSSCEEEEEE
T ss_pred EEEEEeeecCHHHHHHHHHHCCC-EEEEeEcCCCCceEEEEec
Confidence 01246889999999999 6777766655555555554
No 54
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.58 E-value=1.2e-14 Score=119.01 Aligned_cols=124 Identities=12% Similarity=0.135 Sum_probs=91.9
Q ss_pred hcccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCCC-------------CeEEEcCCCC---CCCCCCceeE
Q 027039 90 GKSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL-------------PLVSRADPHN---LPFFDEAFDV 151 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~~-------------~~~~~~d~~~---~~~~~~~fD~ 151 (229)
+...++||++|||+|||+|.++..+++. +.++|+|+|+++.+ +..+.+|... .++..+++|+
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDv 150 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDG 150 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEE
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEE
Confidence 3446799999999999999999999987 56899999999873 3466777655 4567789999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCC-------cccHHHHHHHHhcCceeEeeeeeecC
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECA-------GREIKQIVELFRTSRFVDAANVTVNG 214 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~-------~~~~~~l~~l~~~~~~~~~~~~~~~~ 214 (229)
|++. +.++-++..++.++.+.|||||++++...... ...+.+..+.+...+|.-++.++...
T Consensus 151 Vf~d-~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 151 LYAD-VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp EEEC-CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred EEEe-ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 9873 33433678899999999999999998764432 22344445556667776666655543
No 55
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=3.5e-14 Score=114.52 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccc--h
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHL--A 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~--~ 158 (229)
+++.+|||+|||+|..+..+++.+. +++|+|+++. .+.++.+|+.++++++++||+|+++.. .
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 5688999999999999999999866 9999999974 367999999998888889999999876 4
Q ss_pred hhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 159 EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 ~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++. ++.++++++.++|||||.+++....
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 444 6788999999999999999877543
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=1.5e-14 Score=117.86 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=92.4
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
++.+|||||||+|..+..++..+. +|+|+|+++. .+.++++|+.+.+ ++++||+|+++.+.+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 345999999999999999988765 8999999976 2568999999977 456999999998777
Q ss_pred hh---CHHHHHHHHHhccccCcEEEEEeecCC--------cccHHHHHHHHhcCceeEeeeee
Q 027039 160 AL---FPSRFVGEMERTVKIGGVCMVLMEECA--------GREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 160 ~~---~~~~~l~~~~~~LkpgG~lil~~~~~~--------~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
++ ++.++++++.++|||||.+++...... ..+..++.+++...+|..+..-.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 66 568899999999999999887654321 23678899999988887665443
No 57
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.58 E-value=1.8e-14 Score=114.87 Aligned_cols=123 Identities=12% Similarity=0.121 Sum_probs=92.7
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
++.+|||+|||+|..+..++.. +..+++++|+++. .+.++++|+.+.+ ++++||+|+++.+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~~- 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAFA- 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCSS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEeccC-
Confidence 5789999999999999999986 5569999999975 2568899998876 46799999997643
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeec--CCeeEEEEEEec
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVN--GSNMTRILMRRT 225 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 225 (229)
++..+++++.+.|||||.+++.... ....++.++++..+.++++.+..+ +...+.++++++
T Consensus 143 --~~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 143 --SLNDMVSWCHHLPGEQGRFYALKGQ---MPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp --SHHHHHHHHTTSEEEEEEEEEEESS---CCHHHHHTSCTTEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred --CHHHHHHHHHHhcCCCcEEEEEeCC---CchHHHHHHhcCCceeeeeeeccCCCCCceEEEEEEec
Confidence 4789999999999999999877554 345667777764455555544433 444455555543
No 58
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=6.3e-15 Score=124.50 Aligned_cols=132 Identities=15% Similarity=0.213 Sum_probs=94.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------------------------------------------- 130 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~------------------------------------------- 130 (229)
.++.+|||||||+|..+..++.. +..+|+|+|+++.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46889999999999999999988 5569999999864
Q ss_pred ------------------------------CCeEEEcCCCCCC-----CCCCceeEEEcccchhhh-------CHHHHHH
Q 027039 131 ------------------------------LPLVSRADPHNLP-----FFDEAFDVAFTAHLAEAL-------FPSRFVG 168 (229)
Q Consensus 131 ------------------------------~~~~~~~d~~~~~-----~~~~~fD~V~~~~~~~~~-------~~~~~l~ 168 (229)
.+.++++|+...+ +.+++||+|+|..+.+++ .+.++++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 3557778877543 567899999999776444 5688999
Q ss_pred HHHhccccCcEEEEEeecCCc-------------------ccHHHHHHHHhc--CceeEeeeeee-----cCCeeEEEEE
Q 027039 169 EMERTVKIGGVCMVLMEECAG-------------------REIKQIVELFRT--SRFVDAANVTV-----NGSNMTRILM 222 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~-------------------~~~~~l~~l~~~--~~~~~~~~~~~-----~~~~~~~~~~ 222 (229)
++.++|||||.+++....... ....++.+.+.. .+|..++.+.. .|.+....++
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g~~r~i~~~ 284 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVYLF 284 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-----------CCCEEE
T ss_pred HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccCCCCCCCccceEEEE
Confidence 999999999998875332110 012345566666 88877766543 5676666776
Q ss_pred Eecc
Q 027039 223 RRTR 226 (229)
Q Consensus 223 ~~~~ 226 (229)
+|+.
T Consensus 285 ~k~~ 288 (292)
T 3g07_A 285 HKAR 288 (292)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 6654
No 59
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=4.7e-15 Score=122.74 Aligned_cols=127 Identities=13% Similarity=0.136 Sum_probs=94.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCC---CCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFF---DEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~---~~~fD~V~~~ 155 (229)
.++.+|||||||+|..+..++.. +..+|+++|+++. .+.++++|+++++.. +++||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 57889999999999999999987 6679999999976 356889998887643 4799999997
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc--CceeEeeeeeecCC--eeEEEEEEe
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT--SRFVDAANVTVNGS--NMTRILMRR 224 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~--~~~~~~~~~~~~~~--~~~~~~~~~ 224 (229)
.+.. ...+++++.++|||||++++........+..++...++. .+..++..+..++. ....+++++
T Consensus 159 a~~~---~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 159 AVAP---LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp SSCC---HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred CcCC---HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 6543 788999999999999998876654334444455555553 44456666666653 334444454
No 60
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.57 E-value=7.3e-15 Score=120.47 Aligned_cols=128 Identities=16% Similarity=0.104 Sum_probs=93.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCC---CCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFF---DEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~---~~~fD~V~~~ 155 (229)
.++.+|||||||+|..+..++.. +..+|+|+|+++. .+.++++|+.++++. +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 57889999999999999999864 4459999999984 356889998887754 6799999997
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeE--eeeeeecC--CeeEEEEEEec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVD--AANVTVNG--SNMTRILMRRT 225 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~--~~~~~~~~--~~~~~~~~~~~ 225 (229)
.+. ++..+++++.++|||||.+++...........++.+.++..++.. +..+..+. .....+++++.
T Consensus 149 ~~~---~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 149 AVA---RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp CCS---CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred ccC---CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEec
Confidence 643 588999999999999999987654433344556666777666644 33444443 33344444443
No 61
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.57 E-value=3e-14 Score=119.39 Aligned_cols=100 Identities=21% Similarity=0.138 Sum_probs=82.5
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCC
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFF 145 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~ 145 (229)
..+..++....++++.+|||||||+|..+..+++. |. +|+|+|+++. .+.++.+|+.++|
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--
Confidence 34444555555688999999999999999999955 76 9999999965 3558888887765
Q ss_pred CCceeEEEcccchhhh---CHHHHHHHHHhccccCcEEEEEeec
Q 027039 146 DEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++||+|++..+.+|. ++..+++++.++|||||.+++....
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 170 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT 170 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 789999999888877 5789999999999999999987644
No 62
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.57 E-value=1.8e-14 Score=114.56 Aligned_cols=116 Identities=15% Similarity=0.215 Sum_probs=92.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccchhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~ 160 (229)
+++ +|||||||+|..+..+++.+. +++|+|+++. .+.++.+|+.+.++++++||+|+++.....
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 667 999999999999999999876 9999999976 355888999999888899999999643222
Q ss_pred h-CHHHHHHHHHhccccCcEEEEEeecCC--------------cccHHHHHHHHhcCceeEeeeeee
Q 027039 161 L-FPSRFVGEMERTVKIGGVCMVLMEECA--------------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 161 ~-~~~~~l~~~~~~LkpgG~lil~~~~~~--------------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
. ++.++++++.++|||||.+++...... .++..++.+++...+.+.+.....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~Gf~v~~~~~~~~ 173 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELPSLNWLIANNLER 173 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCSSSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhcCceEEEEEEEEe
Confidence 2 578899999999999999998864321 246778888888666666666543
No 63
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.57 E-value=2.7e-14 Score=117.84 Aligned_cols=119 Identities=8% Similarity=0.008 Sum_probs=93.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-----------------------------------------
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------------------------------- 131 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~----------------------------------------- 131 (229)
...++.+|||+|||+|..+..++..+..+|+|+|+++.+
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 335778999999999999999988865699999999751
Q ss_pred ---C-eEEEcCCCCCC-CCC---CceeEEEcccchh----hh-CHHHHHHHHHhccccCcEEEEEeecC-----------
Q 027039 132 ---P-LVSRADPHNLP-FFD---EAFDVAFTAHLAE----AL-FPSRFVGEMERTVKIGGVCMVLMEEC----------- 187 (229)
Q Consensus 132 ---~-~~~~~d~~~~~-~~~---~~fD~V~~~~~~~----~~-~~~~~l~~~~~~LkpgG~lil~~~~~----------- 187 (229)
+ .++++|+.+.+ +++ ++||+|+++.+.+ +. ++..+++++.++|||||.+++.....
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccc
Confidence 4 78889998854 355 8999999997777 44 57889999999999999998765321
Q ss_pred --CcccHHHHHHHHhcCceeEeeeee
Q 027039 188 --AGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 188 --~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
...+..++.+++...+|..+....
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCHHHHHHHHHHCCCEEEEEEE
Confidence 123566889999988887665543
No 64
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.57 E-value=2.4e-14 Score=115.17 Aligned_cols=89 Identities=15% Similarity=0.079 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------------CCeEEEcCCCCCCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------------~~~~~~~d~~~~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|.++..+++. +..+++|+|+++. .+.++++|+...+.++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 57889999999999999999998 5469999999975 25688999988777778999999
Q ss_pred cccchhhh-CH--HHHHHHHHhccccCcEEEEE
Q 027039 154 TAHLAEAL-FP--SRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~~~~~-~~--~~~l~~~~~~LkpgG~lil~ 183 (229)
++.+.+++ ++ .++++++.++|||||.+++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 99988888 44 68999999999999966644
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.57 E-value=7.8e-15 Score=117.79 Aligned_cols=91 Identities=16% Similarity=0.065 Sum_probs=79.1
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
...++.+|||+|||+|.++..+++.+. +++|+|+++. .+.++++|+.+.+ ++++||+|+++.+.+
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 345778999999999999999999875 9999999975 3568999999988 688999999998888
Q ss_pred hh-CH---HHHHHHHHhccccCcEEEEEee
Q 027039 160 AL-FP---SRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 160 ~~-~~---~~~l~~~~~~LkpgG~lil~~~ 185 (229)
|+ ++ .++++++.++|||||.+++.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 88 66 5679999999999999997653
No 66
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.1e-14 Score=123.08 Aligned_cols=89 Identities=11% Similarity=0.175 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHh--CCCCeEEEecCCCC-----------------CCeEEEcCCCCCCCCC------Cce
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNS--IGVADVTGVELMDS-----------------LPLVSRADPHNLPFFD------EAF 149 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~--~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~~~~------~~f 149 (229)
.++.+|||||||+|..+..+++ .+..+|+|+|+++. .+.++++|+.++++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 5889999999999999999996 34569999999864 4568999999988877 899
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+|+++.+.++.++.++++++.++|||||.+++.
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEE
Confidence 9999998877779999999999999999998873
No 67
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.57 E-value=2.4e-14 Score=120.20 Aligned_cols=93 Identities=14% Similarity=0.246 Sum_probs=81.1
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.+.++.+|||||||+|.++..+++. + ..+|+|+|+++. .+.++++|+.++++ +++||+|+++.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~ 97 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICHA 97 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEES
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEECC
Confidence 3478899999999999999999988 4 359999999976 34589999999887 56999999998
Q ss_pred chhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 157 LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 ~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.++. ++.++++++.++|||||.+++....
T Consensus 98 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88888 8999999999999999999876544
No 68
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.56 E-value=4.6e-14 Score=112.61 Aligned_cols=93 Identities=20% Similarity=0.268 Sum_probs=79.2
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcccchhh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~ 160 (229)
+.++.+|||+|||+|..+..+++.+..+++|+|+++. .+.++++|+.++++++++||+|+++...++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3788999999999999999999986559999999975 366899999998888899999998755433
Q ss_pred h----------------CHHHHHHHHHhccccCcEEEEEeec
Q 027039 161 L----------------FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 161 ~----------------~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
. ++.++++++.++|||||.+++....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 2 4588999999999999998876654
No 69
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=2.8e-14 Score=113.76 Aligned_cols=115 Identities=19% Similarity=0.260 Sum_probs=92.1
Q ss_pred CCCCeEEEEcCCCChhhHH-HHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMA-FNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~-l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
.++.+|||+|||+|..+.. ++..+. +++|+|+++. .+.++++|+.++++++++||+|+++.+.+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 6789999999999998544 445565 9999999975 35689999999998889999999987666
Q ss_pred hh---CHHHHHHHHHhccccCcEEEEEeecCC---------------------------cccHHHHHHHHhcCceeEeee
Q 027039 160 AL---FPSRFVGEMERTVKIGGVCMVLMEECA---------------------------GREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 160 ~~---~~~~~l~~~~~~LkpgG~lil~~~~~~---------------------------~~~~~~l~~l~~~~~~~~~~~ 209 (229)
|. ++.++++++.++|||||.+++...... ..+.+++.++|...++....+
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~ 180 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKED 180 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeee
Confidence 65 468899999999999999988764311 125567888999888877665
Q ss_pred e
Q 027039 210 V 210 (229)
Q Consensus 210 ~ 210 (229)
.
T Consensus 181 ~ 181 (209)
T 2p8j_A 181 R 181 (209)
T ss_dssp E
T ss_pred e
Confidence 4
No 70
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.56 E-value=6.8e-14 Score=111.56 Aligned_cols=125 Identities=14% Similarity=0.192 Sum_probs=97.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------------CeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------------~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
++++.+|||+|||+|..+..+++.+..+++|+|+++.+ +.+.++|+.+. .+++||+|+++...
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcH
Confidence 36889999999999999999998877799999999762 67888998764 36899999998655
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEecc
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRRTR 226 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (229)
++ ..++++++.++|||||.+++.... ..+...+.+.+...+|..+......++ ..++.++..
T Consensus 136 ~~--~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~Gf~~~~~~~~~~w--~~~~~~~~~ 197 (205)
T 3grz_A 136 EI--LLDLIPQLDSHLNEDGQVIFSGID--YLQLPKIEQALAENSFQIDLKMRAGRW--IGLAISRKH 197 (205)
T ss_dssp HH--HHHHGGGSGGGEEEEEEEEEEEEE--GGGHHHHHHHHHHTTEEEEEEEEETTE--EEEEEEECC
T ss_pred HH--HHHHHHHHHHhcCCCCEEEEEecC--cccHHHHHHHHHHcCCceEEeeccCCE--EEEEEeccc
Confidence 53 478899999999999998875433 346778889999999887776665555 344444443
No 71
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.56 E-value=6.8e-14 Score=112.86 Aligned_cols=113 Identities=23% Similarity=0.314 Sum_probs=94.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-CHHH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FPSR 165 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~~~~ 165 (229)
.++.+|||+|||+|..+..++.. +|+|+++. .+.++.+|+.++++++++||+|++..+.++. ++.+
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH
Confidence 34889999999999999988765 89999976 3568899999999888999999999888888 8999
Q ss_pred HHHHHHhccccCcEEEEEeecCC---------------------cccHHHHHHHHhcCceeEeeeeee
Q 027039 166 FVGEMERTVKIGGVCMVLMEECA---------------------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 166 ~l~~~~~~LkpgG~lil~~~~~~---------------------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+++++.++|||||.+++...... ..+..++.+++...+|..+.....
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 99999999999999998765421 136678889999888876665433
No 72
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.55 E-value=2.1e-14 Score=115.49 Aligned_cols=116 Identities=14% Similarity=0.087 Sum_probs=93.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------CCeEEEcCCCCC---CCCC-CceeEEEcccchhhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------LPLVSRADPHNL---PFFD-EAFDVAFTAHLAEAL 161 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------~~~~~~~d~~~~---~~~~-~~fD~V~~~~~~~~~ 161 (229)
.++.+|||||||+|..+..+++.+. +++|+|+++. ...+..+|+.++ ++.+ ++||+|+++.+.++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~ 129 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQ 129 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhhh
Confidence 5679999999999999999999976 9999999986 345778887765 5444 459999999777744
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecCC-----------------------------cccHHHHHHHHhcCceeEeeeee
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEECA-----------------------------GREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~~-----------------------------~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
++..+++++.++|||||.+++...... ..+..++.+++...+|..+.-..
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 889999999999999999998764210 12678899999999998776543
No 73
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.55 E-value=1.7e-14 Score=116.28 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=82.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCCC----CCCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNL----PFFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~~----~~~~~~fD~V~~ 154 (229)
.++++.+|||+|||+|..+..+++. |.++|+|+|+|+. .+.++.+|+.+. ++. ++||+|++
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 4578999999999999999999887 5569999999985 244677888773 444 79999999
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEEeecCC---cccHHHHH----HHHhcCceeEeeeeee
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECA---GREIKQIV----ELFRTSRFVDAANVTV 212 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~---~~~~~~l~----~l~~~~~~~~~~~~~~ 212 (229)
+ +..+.....+++++.++|||||++++.+.... ..+.+++. +.+++. |.-++.++.
T Consensus 133 ~-~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 133 D-IAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp C-CCSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred e-ccChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 7 22222344568999999999999998863311 11223322 225665 666666555
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.55 E-value=7e-14 Score=111.50 Aligned_cols=108 Identities=12% Similarity=0.066 Sum_probs=87.3
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.++++.+|||+|||+|..+..+++. +..+++++|+++. .++++++|+.+.....++||+|+++.
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 4578999999999999999999988 4569999999976 35588899876543447899999976
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
..+ ++.++++++.+.|||||++++.... ..+..++.+.++..++
T Consensus 117 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 117 SGG--MLEEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGY 160 (204)
T ss_dssp CTT--CHHHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred CCc--CHHHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCC
Confidence 444 6889999999999999998876544 3456677788887776
No 75
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.55 E-value=3.2e-14 Score=120.30 Aligned_cols=100 Identities=17% Similarity=0.069 Sum_probs=83.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCC
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFF 145 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~ 145 (229)
..+..++....++++.+|||||||+|..+..+++. |. +|+|+|+++. .+.++.+|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---
Confidence 33444455556789999999999999999999998 84 9999999976 255888898776
Q ss_pred CCceeEEEcccchhhh-CH---------HHHHHHHHhccccCcEEEEEeec
Q 027039 146 DEAFDVAFTAHLAEAL-FP---------SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~-~~---------~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++||+|+++.+.+|. +| ..+++++.++|||||.+++....
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 6899999999888877 55 78999999999999999987654
No 76
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.54 E-value=9.5e-15 Score=122.69 Aligned_cols=91 Identities=20% Similarity=0.264 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC-------------------eEEEcCCCCCC---CCCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-------------------LVSRADPHNLP---FFDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~-------------------~~~~~d~~~~~---~~~~~fD~V 152 (229)
.++.+|||||||+|..+..+++.+. +|+|+|+|+.++ .+..+|+.+++ +++++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 5788999999999999999999977 999999997632 36788888877 788999999
Q ss_pred Ecc-cchhhh-C-------HHHHHHHHHhccccCcEEEEEeec
Q 027039 153 FTA-HLAEAL-F-------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 153 ~~~-~~~~~~-~-------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++. .+.+|+ + +.++++++.++|||||.+++.+..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 997 777777 7 899999999999999999987664
No 77
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.54 E-value=3.1e-14 Score=112.80 Aligned_cols=136 Identities=10% Similarity=0.128 Sum_probs=94.1
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC----------------CCeEEEcCCCCCC-CCCCceeEEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS----------------LPLVSRADPHNLP-FFDEAFDVAF 153 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~----------------~~~~~~~d~~~~~-~~~~~fD~V~ 153 (229)
.++++.+|||+|||+|..+..+++. +.++++|+|+++. .+.++++|+.+++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3478899999999999999999987 4569999999975 3558899988875 5678999999
Q ss_pred cccch---------hhh-CHHHHHHHHHhccccCcEEEEEeecC---CcccHHHHHHHHhc-----CceeEeeeeeecCC
Q 027039 154 TAHLA---------EAL-FPSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQIVELFRT-----SRFVDAANVTVNGS 215 (229)
Q Consensus 154 ~~~~~---------~~~-~~~~~l~~~~~~LkpgG~lil~~~~~---~~~~~~~l~~l~~~-----~~~~~~~~~~~~~~ 215 (229)
++... ... ++.++++++.++|||||++++..... .......+.+.+.. ........+...+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~ 178 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANC 178 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccC
Confidence 87422 111 34679999999999999998776332 12233444454442 22233333334455
Q ss_pred eeEEEEEEeccCC
Q 027039 216 NMTRILMRRTRLP 228 (229)
Q Consensus 216 ~~~~~~~~~~~~~ 228 (229)
-...++.+++++|
T Consensus 179 pp~~~~~~~~~~~ 191 (197)
T 3eey_A 179 PPILVCIEKISEG 191 (197)
T ss_dssp CCEEEEEEECCSS
T ss_pred CCeEEEEEEcccc
Confidence 5566666776654
No 78
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.53 E-value=5.4e-14 Score=110.29 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=71.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------------CeEEEcCCCCCC-CCCCceeEEEcc-
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNLP-FFDEAFDVAFTA- 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------------~~~~~~d~~~~~-~~~~~fD~V~~~- 155 (229)
.++++.+|||+|||+|..+..+++.+ .+|+|+|+++.+ +.+++++...++ +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLS-KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 45789999999999999999999984 599999999862 457777776643 457899999987
Q ss_pred cchhh--------h-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 HLAEA--------L-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ~~~~~--------~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
..... . ...++++++.++|||||.+++....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 22221 1 3467889999999999999877654
No 79
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.53 E-value=2.2e-13 Score=104.94 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=82.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCC----CCCeEEEcCCCCCC--------CCCCceeEEEcccch
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMD----SLPLVSRADPHNLP--------FFDEAFDVAFTAHLA 158 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~----~~~~~~~~d~~~~~--------~~~~~fD~V~~~~~~ 158 (229)
..+++.+|||+|||+|..+..+++. | ..+++++|+++ ..+.++.+|+.+.+ +++++||+|+++...
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 3578899999999999999999887 4 36999999998 23458889998876 777899999997544
Q ss_pred hhh-CH-----------HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 159 EAL-FP-----------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 159 ~~~-~~-----------~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
++. .+ .++++++.++|||||.+++.... ......+.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ--GEGFDEYLREIRS 151 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES--STTHHHHHHHHHH
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec--CCcHHHHHHHHHH
Confidence 333 22 68999999999999998876654 3344455555544
No 80
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.53 E-value=1.1e-13 Score=116.88 Aligned_cols=89 Identities=20% Similarity=0.291 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------------CCeEEEcCCCCCCCCCCceeEEEcc-c
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------------LPLVSRADPHNLPFFDEAFDVAFTA-H 156 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------------~~~~~~~d~~~~~~~~~~fD~V~~~-~ 156 (229)
++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.++++ +++||+|++. .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 445999999999999999999975 9999999975 25699999999887 7899999865 5
Q ss_pred chhhhC---HHHHHHHHHhccccCcEEEEEeec
Q 027039 157 LAEALF---PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 ~~~~~~---~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.++.+ ..++++++.++|||||.+++.+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 555555 378999999999999999987644
No 81
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.53 E-value=8.4e-14 Score=112.87 Aligned_cols=116 Identities=15% Similarity=0.173 Sum_probs=88.3
Q ss_pred cCCCCCeEEEEcCC-CChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCC-CCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAG-AGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNL-PFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G-~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~-~~~~~~fD~V~~~~ 156 (229)
.++++.+|||+||| +|..+..++.....+|+|+|+++. .+.++++|+... ++++++||+|+++.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 34789999999999 999999999883349999999986 256899997543 45678999999973
Q ss_pred chhhh--------------------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 157 LAEAL--------------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 157 ~~~~~--------------------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
..... ...++++++.++|||||++++.+... .....++.+.+++.++ .+..+
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~l~~~g~-~~~~~ 203 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-EKLLNVIKERGIKLGY-SVKDI 203 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-HHHHHHHHHHHHHTTC-EEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-HhHHHHHHHHHHHcCC-ceEEE
Confidence 22111 14789999999999999999876642 2456778888887777 44444
No 82
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.53 E-value=1.9e-13 Score=113.55 Aligned_cols=92 Identities=17% Similarity=0.154 Sum_probs=76.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CC-CeEEEecCCCC----------------------CCeEEEcC---CCCCCCC
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GV-ADVTGVELMDS----------------------LPLVSRAD---PHNLPFF 145 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~-~~v~~vD~s~~----------------------~~~~~~~d---~~~~~~~ 145 (229)
.++++.+|||||||+|.++..+++. |. .+|+|+|+++. .+.++.+| ...+|++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 5678999999999999999999987 42 59999999984 25578888 4567778
Q ss_pred CCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEe
Q 027039 146 DEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
+++||+|+++.+.++. ++..+++.+.++++|||.+++..
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999999888888 78777777777777799988764
No 83
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.52 E-value=8.3e-14 Score=118.50 Aligned_cols=101 Identities=16% Similarity=0.040 Sum_probs=83.9
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCC
Q 027039 82 AHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPF 144 (229)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~ 144 (229)
...+..++....+.++.+|||||||+|..+..+++. |. +|+|+|+++. .+.++.+|+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-
Confidence 344445555556688999999999999999999988 77 9999999976 2568888887765
Q ss_pred CCCceeEEEcccchhhh---CHHHHHHHHHhccccCcEEEEEeec
Q 027039 145 FDEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 145 ~~~~fD~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++||+|++..+.++. ++.++++++.++|||||.+++....
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 789999999888777 5789999999999999999987654
No 84
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.52 E-value=4.4e-14 Score=118.38 Aligned_cols=113 Identities=16% Similarity=0.262 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccchhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~ 160 (229)
.++.+|||+|||+|..+..+++.|. +|+|+|+++. .+.++.+|+.+.++ +++||+|+++.+.++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 4789999999999999999999977 9999999986 35688999998877 789999999988887
Q ss_pred hC---HHHHHHHHHhccccCcEEEEEeecCC-----------cccHHHHHHHHhcCceeEeee
Q 027039 161 LF---PSRFVGEMERTVKIGGVCMVLMEECA-----------GREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 161 ~~---~~~~l~~~~~~LkpgG~lil~~~~~~-----------~~~~~~l~~l~~~~~~~~~~~ 209 (229)
.+ ...+++++.++|||||.++++..... ..+..++.++|...+++...+
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 259 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKDWEFLEYNE 259 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTTSEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcCCEEEEEEc
Confidence 73 35899999999999999887665321 234667888998877766643
No 85
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.52 E-value=3.2e-13 Score=107.32 Aligned_cols=131 Identities=15% Similarity=0.210 Sum_probs=91.3
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----CCeEEEcCCCCCCCC-------C----CceeEEEccc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----LPLVSRADPHNLPFF-------D----EAFDVAFTAH 156 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----~~~~~~~d~~~~~~~-------~----~~fD~V~~~~ 156 (229)
..++++.+|||+|||+|.++..+++. .++|+|+|+++. .+.++++|+.+.+.. . ++||+|+++.
T Consensus 21 ~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDA 99 (191)
T ss_dssp CCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECC
T ss_pred CCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCC
Confidence 34588999999999999999999998 459999999986 467999999886521 1 4999999962
Q ss_pred c--------hhhh----CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee----cCCeeEEE
Q 027039 157 L--------AEAL----FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV----NGSNMTRI 220 (229)
Q Consensus 157 ~--------~~~~----~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~----~~~~~~~~ 220 (229)
. ..+. ....+++.+.++|||||.+++.+-. .....++...++. .|..++.++- .+|+..-+
T Consensus 100 ~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~--~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 100 MAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ--GDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC--STHHHHHHHHHGG-GEEEEEEECC------CCEEEE
T ss_pred CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC--CCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEE
Confidence 1 1111 1256789999999999998876654 3344566666653 4666655433 35554444
Q ss_pred EEEecc
Q 027039 221 LMRRTR 226 (229)
Q Consensus 221 ~~~~~~ 226 (229)
+.+..|
T Consensus 177 v~~~~~ 182 (191)
T 3dou_A 177 MFFGFK 182 (191)
T ss_dssp EEEEEC
T ss_pred EEeeec
Confidence 444433
No 86
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.52 E-value=1.7e-14 Score=121.58 Aligned_cols=92 Identities=9% Similarity=0.022 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCChhhHHH----HhC-CCCeE--EEecCCCCCCe------------------EEEcCCCCCC------
Q 027039 95 FNHSKVLCVSAGAGHEVMAF----NSI-GVADV--TGVELMDSLPL------------------VSRADPHNLP------ 143 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l----~~~-g~~~v--~~vD~s~~~~~------------------~~~~d~~~~~------ 143 (229)
.++.+|||||||+|..+..+ +.. +...+ +|+|+|++|++ +..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 56789999999999766533 332 33344 99999976332 2233443332
Q ss_pred CCCCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 144 FFDEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 144 ~~~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++++||+|+++++.++. ++.+++++++++|||||.+++....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 568899999999999999 8999999999999999999987543
No 87
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.52 E-value=2.2e-13 Score=107.53 Aligned_cols=116 Identities=15% Similarity=0.113 Sum_probs=82.8
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CC---------CeEEEecCCCCC----CeEE-EcCCCCCC--------CCCCc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GV---------ADVTGVELMDSL----PLVS-RADPHNLP--------FFDEA 148 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~---------~~v~~vD~s~~~----~~~~-~~d~~~~~--------~~~~~ 148 (229)
..++++.+|||+|||+|.++..+++. |. .+|+|+|+++.. +.++ ++|+.+.+ +++++
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 34688999999999999999999987 53 699999999864 5678 88877643 34568
Q ss_pred eeEEEccc----chhhh-CH-------HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 149 FDVAFTAH----LAEAL-FP-------SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 149 fD~V~~~~----~~~~~-~~-------~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
||+|+++. ..++. +. ..+++++.++|||||.+++.+.. .....++.+.++. .+..+..+
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~~-~f~~v~~~ 168 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA--GSQSRRLQRRLTE-EFQNVRII 168 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC--SGGGHHHHHHHHH-HEEEEEEE
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC--CccHHHHHHHHHH-HhcceEEE
Confidence 99999853 12222 23 47899999999999998876543 3344555555543 24444433
No 88
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=1.5e-13 Score=111.84 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=90.8
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCC----CCCCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHN----LPFFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~----~~~~~~~fD~V~ 153 (229)
..++++.+|||+|||+|..+..+++. |.++|+|+|+++. .+.++.+|+.+ .++. ++||+|+
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE
Confidence 34578899999999999999999988 6569999999975 34588899988 7765 7899999
Q ss_pred cccchhhhCH---HHHHHHHHhccccCcEEEEEeecCCcc--------cHHHHHHHHhcCceeEeeeeeec--CCeeEEE
Q 027039 154 TAHLAEALFP---SRFVGEMERTVKIGGVCMVLMEECAGR--------EIKQIVELFRTSRFVDAANVTVN--GSNMTRI 220 (229)
Q Consensus 154 ~~~~~~~~~~---~~~l~~~~~~LkpgG~lil~~~~~~~~--------~~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~ 220 (229)
. ++ .++ ..+++++.+.|||||.+++.+...... ..+++. .+...+|..++..... ......+
T Consensus 149 ~-~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v 223 (230)
T 1fbn_A 149 E-DV---AQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMF 223 (230)
T ss_dssp E-CC---CSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEE
T ss_pred E-ec---CChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEE
Confidence 3 22 134 778999999999999999865331111 113444 6666666555544433 2333455
Q ss_pred EEEecc
Q 027039 221 LMRRTR 226 (229)
Q Consensus 221 ~~~~~~ 226 (229)
++++++
T Consensus 224 ~~~k~~ 229 (230)
T 1fbn_A 224 VGIWEG 229 (230)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 555543
No 89
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=1.7e-13 Score=107.28 Aligned_cols=113 Identities=16% Similarity=0.161 Sum_probs=85.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------C--CeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------L--PLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~--~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
..+++.+|||+|||+|..+..+++.+ .+++|+|+++. . +.++.+|+.+ ++++++||+|+++
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~ 126 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITN 126 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEEC
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEEC
Confidence 34688899999999999999999884 49999999875 1 6788899887 3457899999998
Q ss_pred cchhh-h-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 156 HLAEA-L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 156 ~~~~~-~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
...++ . ...++++++.+.|||||.+++..... ....++.+.++.. +..++.+
T Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~-~~~~~~~ 180 (194)
T 1dus_A 127 PPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK--QGAKSLAKYMKDV-FGNVETV 180 (194)
T ss_dssp CCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST--HHHHHHHHHHHHH-HSCCEEE
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC--CChHHHHHHHHHH-hcceEEE
Confidence 66554 2 56889999999999999999877763 2333344444433 3333333
No 90
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.51 E-value=1.6e-14 Score=117.34 Aligned_cols=105 Identities=11% Similarity=0.121 Sum_probs=86.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCC-CCCCCC-CCceeEEEcccchhhhC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADP-HNLPFF-DEAFDVAFTAHLAEALF 162 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~-~~~~~~-~~~fD~V~~~~~~~~~~ 162 (229)
+++.+|||||||+|..+..+++.+. +|+|+|+++. .+.++++|+ ..+|++ +++||+|+++ .+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-----~~ 120 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-----RG 120 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-----SC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-----CC
Confidence 6889999999999999999999965 9999999976 467999999 568888 8999999996 35
Q ss_pred HHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEee
Q 027039 163 PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~ 208 (229)
+.++++++.++|||||.++ .... ..+..++.+.+...+|..+.
T Consensus 121 ~~~~l~~~~~~LkpgG~l~-~~~~--~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 121 PTSVILRLPELAAPDAHFL-YVGP--RLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp CSGGGGGHHHHEEEEEEEE-EEES--SSCCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCcEEE-EeCC--cCCHHHHHHHHHHCCCeEEE
Confidence 7788999999999999988 2222 33456678888877766544
No 91
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.51 E-value=1.1e-13 Score=111.03 Aligned_cols=104 Identities=7% Similarity=-0.060 Sum_probs=81.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.+.++.+|||+|||+|..+..+++.+ .+|+|+|+++. .+.++++|+.+......+||+|+++.
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAG-GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 45788999999999999999999995 49999999976 25688899888433346899999875
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
.. ++. +++++.+.|||||++++.... ..+..++.+.++..+
T Consensus 131 ~~---~~~-~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 131 GG---SQA-LYDRLWEWLAPGTRIVANAVT--LESETLLTQLHARHG 171 (204)
T ss_dssp CC---CHH-HHHHHHHHSCTTCEEEEEECS--HHHHHHHHHHHHHHC
T ss_pred cc---cHH-HHHHHHHhcCCCcEEEEEecC--cccHHHHHHHHHhCC
Confidence 22 566 999999999999998866554 455666777776554
No 92
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=1.3e-14 Score=115.67 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCCCeE--------------EEcCCCCCCCCC-----CceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPLV--------------SRADPHNLPFFD-----EAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~--------------~~~d~~~~~~~~-----~~fD~V~~ 154 (229)
.++.+|||+|||+|..+..+++. +..+++|+|+++.+++. +++|+.+ ++++ ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 67889999999999999999988 34599999999986543 3333333 3444 89999999
Q ss_pred ccch------hhhC---------------------HHHHHHHHHhccccCcE-EEEEeecCCcccHHHHHHHHh--cCce
Q 027039 155 AHLA------EALF---------------------PSRFVGEMERTVKIGGV-CMVLMEECAGREIKQIVELFR--TSRF 204 (229)
Q Consensus 155 ~~~~------~~~~---------------------~~~~l~~~~~~LkpgG~-lil~~~~~~~~~~~~l~~l~~--~~~~ 204 (229)
+.-. ++.. ..++++++.++|||||. +++.+. .....++.+++. ..++
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~l~~~~~gf 184 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---HNQADEVARLFAPWRERG 184 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT---TSCHHHHHHHTGGGGGGT
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC---CccHHHHHHHHHHhhcCC
Confidence 6211 1110 16788999999999999 554444 345677888888 8888
Q ss_pred eEeeeeeecCCeeEEEEEEecc
Q 027039 205 VDAANVTVNGSNMTRILMRRTR 226 (229)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~ 226 (229)
..+..........+.++.++..
T Consensus 185 ~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 185 FRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp EECCEEECTTSCEEEEEEEECC
T ss_pred ceEEEEEecCCCEEEEEEEEcC
Confidence 8888777766666666666543
No 93
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.51 E-value=2.6e-13 Score=110.44 Aligned_cols=86 Identities=17% Similarity=0.144 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEccc-chh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAH-LAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~-~~~ 159 (229)
+++.+|||+|||+|..+..+++. .+++|+|+++. .+.++++|+.+.+++ ++||+|++.. ..+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 67899999999999999999988 59999999975 356889999888775 8999999874 555
Q ss_pred hh----CHHHHHHHHHhccccCcEEEEE
Q 027039 160 AL----FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 160 ~~----~~~~~l~~~~~~LkpgG~lil~ 183 (229)
++ ++.++++++.++|||||.+++.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 55 3578899999999999999874
No 94
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=1.1e-14 Score=119.23 Aligned_cols=112 Identities=11% Similarity=0.029 Sum_probs=84.9
Q ss_pred cccCchhHHhhhhhHHHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------CCeE
Q 027039 67 RLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------LPLV 134 (229)
Q Consensus 67 ~~~~~~~w~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------~~~~ 134 (229)
.+|....|+........++. .++++.+|||+|||+|..+..+++.+. +|+|+|+++. .+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~ 105 (245)
T 3ggd_A 33 VLWDANVERAVVVDLPRFEL------LFNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAANISY 105 (245)
T ss_dssp CTTCCCGGGTHHHHHHHHTT------TSCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCTTEEE
T ss_pred ceecchhHHHHHHHHHHHhh------ccCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCcccCceE
Confidence 34555555544433333322 247889999999999999999999876 9999999976 3568
Q ss_pred EEcCCCCCCCCC-----CceeEEEcccchhhhC---HHHHHHHHHhccccCcEEEEEee
Q 027039 135 SRADPHNLPFFD-----EAFDVAFTAHLAEALF---PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 135 ~~~d~~~~~~~~-----~~fD~V~~~~~~~~~~---~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+++|+.+.++.. ..||+|+++.+.++.. +.++++++.++|||||++++...
T Consensus 106 ~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 106 RLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp EECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred EECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 899998865422 2499999998777773 57999999999999999776543
No 95
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.49 E-value=7e-14 Score=108.54 Aligned_cols=105 Identities=10% Similarity=0.062 Sum_probs=79.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCC-CCCCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHN-LPFFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~-~~~~~~~fD~V~~ 154 (229)
...++.+|||+|||+|..+..++.. +..+++++|+++. .+ ++.+|..+ ++..+++||+|++
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 4578889999999999999999988 5569999999975 13 66677644 3433389999999
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
+...++ .++++++.+.|||||.+++.... ..+...+.+.++..+
T Consensus 101 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 101 GGGLTA---PGVFAAAWKRLPVGGRLVANAVT--VESEQMLWALRKQFG 144 (178)
T ss_dssp CC-TTC---TTHHHHHHHTCCTTCEEEEEECS--HHHHHHHHHHHHHHC
T ss_pred CCcccH---HHHHHHHHHhcCCCCEEEEEeec--cccHHHHHHHHHHcC
Confidence 876664 78999999999999998865543 334455666665443
No 96
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=6.3e-15 Score=120.38 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=73.3
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC--------------CeEEEcCCCCC--CCCCCceeEEEc-cc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNL--PFFDEAFDVAFT-AH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~--------------~~~~~~d~~~~--~~~~~~fD~V~~-~~ 156 (229)
.+++.+|||||||+|..+..+++.+..+|+|+|+++.+ +.++++|+.++ ++++++||+|++ ..
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 36788999999999999999988765699999999863 45888999887 888999999999 32
Q ss_pred chh----hh-CHHHHHHHHHhccccCcEEEEE
Q 027039 157 LAE----AL-FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 157 ~~~----~~-~~~~~l~~~~~~LkpgG~lil~ 183 (229)
... +. .+..+++++.++|||||+++++
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 211 11 3457899999999999998754
No 97
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.49 E-value=2.2e-13 Score=113.88 Aligned_cols=126 Identities=13% Similarity=0.135 Sum_probs=95.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEccc--
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAH-- 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~-- 156 (229)
.++.+|||+|||+|..+..++.. +..+++|+|+++. .+.++++|+.+. +++++||+|+++.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCC
Confidence 56789999999999999999965 6669999999976 256888888763 4467999999971
Q ss_pred -----------chhh-------------hCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee
Q 027039 157 -----------LAEA-------------LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 157 -----------~~~~-------------~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+.++ .+..++++++.+.|||||.+++.... .+..++.++++..+|..+.....
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---QQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS---SCHHHHHHHHHHTTCTTCCEEEC
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc---hHHHHHHHHHHHCCCcEEEEEec
Confidence 1111 13477899999999999998876543 45577888888888877766666
Q ss_pred cCCeeEEEEEEe
Q 027039 213 NGSNMTRILMRR 224 (229)
Q Consensus 213 ~~~~~~~~~~~~ 224 (229)
.....+.++.++
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 566667776654
No 98
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.49 E-value=6.3e-14 Score=116.69 Aligned_cols=98 Identities=14% Similarity=0.037 Sum_probs=77.1
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe---------EEEcCCCCCCC-----CCCceeEEE
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL---------VSRADPHNLPF-----FDEAFDVAF 153 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~---------~~~~d~~~~~~-----~~~~fD~V~ 153 (229)
++....+.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++ +++.+..+.+. .+++||+|+
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv 115 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVL 115 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEE
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEE
Confidence 33444568899999999999999999999976 9999999987543 34555555433 257999999
Q ss_pred cccchhhh---CHHHHHHHHHhccccCcEEEEEeecC
Q 027039 154 TAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 154 ~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
++.+.+|+ +...+++++.++| |||++++.+...
T Consensus 116 ~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 116 NDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred EhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 99877766 3467899999999 999999877653
No 99
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.49 E-value=1.2e-12 Score=114.08 Aligned_cols=133 Identities=13% Similarity=0.073 Sum_probs=101.1
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCcee
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFD 150 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD 150 (229)
+.....++++.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+. .+++. .||
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D 270 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GAD 270 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCS
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-Cce
Confidence 333334567899999999999999999987 5559999998 44 3678999998 45555 899
Q ss_pred EEEcccchhhhC-HH--HHHHHHHhccccCcEEEEEeecCC---------------------cccHHHHHHHHhcCceeE
Q 027039 151 VAFTAHLAEALF-PS--RFVGEMERTVKIGGVCMVLMEECA---------------------GREIKQIVELFRTSRFVD 206 (229)
Q Consensus 151 ~V~~~~~~~~~~-~~--~~l~~~~~~LkpgG~lil~~~~~~---------------------~~~~~~l~~l~~~~~~~~ 206 (229)
+|++.++.++.. +. ++++++.+.|||||++++.-.... ..+..++.++++..+|..
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 999999888774 43 799999999999999987543321 245678889999999988
Q ss_pred eeeeeecCCeeEEEEEE
Q 027039 207 AANVTVNGSNMTRILMR 223 (229)
Q Consensus 207 ~~~~~~~~~~~~~~~~~ 223 (229)
++.....++...++..+
T Consensus 351 ~~~~~~~~~~~svie~~ 367 (369)
T 3gwz_A 351 ERSLPCGAGPVRIVEIR 367 (369)
T ss_dssp EEEEECSSSSEEEEEEE
T ss_pred EEEEECCCCCcEEEEEE
Confidence 88766344444555444
No 100
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.48 E-value=3.4e-14 Score=124.55 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=80.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCC------------------------CCCeEEEc
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD------------------------SLPLVSRA 137 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~------------------------~~~~~~~~ 137 (229)
..+..++....++++.+|||||||+|..+..++.. |..+++|+|+++ ..+.++++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 33344444446789999999999999999999866 776799999995 24679999
Q ss_pred CCCCCCCCC--CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 138 DPHNLPFFD--EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 138 d~~~~~~~~--~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+.++++.+ ..||+|+++.+....+..+.+.++.++|||||++++.
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred cccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 999988754 4799999986654446788899999999999998743
No 101
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.48 E-value=1.1e-13 Score=111.30 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCC--CCCCceeEEEccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLP--FFDEAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~--~~~~~fD~V~~~~ 156 (229)
.++.+|||||||+|.++..++.. +..+++|+|+++. .+.++++|+.+++ +++++||+|+++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 46789999999999999999987 5569999999965 3558999999877 7788999999984
Q ss_pred chhhh---------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEee
Q 027039 157 LAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 157 ~~~~~---------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~ 208 (229)
...+. ...++++++.++|||||.+++.++. ......+.+.+...++..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN--RGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC--HHHHHHHHHHHHHHTCEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC--HHHHHHHHHHHHHCCCeeee
Confidence 32111 1267999999999999998876653 22345666777766654433
No 102
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.47 E-value=3e-13 Score=112.09 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=85.9
Q ss_pred cCC-CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCC--CCCCceeEEE
Q 027039 93 LLF-NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLP--FFDEAFDVAF 153 (229)
Q Consensus 93 ~~~-~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~--~~~~~fD~V~ 153 (229)
..+ ++.+|||+|||+|.++..+++.+..+|+|+|+++. .+.++++|+.+.+ +++++||+|+
T Consensus 45 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 45 YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 345 78999999999999999999995559999999976 2568899998865 5578999999
Q ss_pred cccch--h---hh----------------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEe
Q 027039 154 TAHLA--E---AL----------------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDA 207 (229)
Q Consensus 154 ~~~~~--~---~~----------------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~ 207 (229)
+|--. . .. ...++++++.++|||||+++++... ....++.+.++..++...
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---ERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---TTHHHHHHHHHHTTEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---HHHHHHHHHHHHCCCceE
Confidence 97211 1 11 2357899999999999999986653 456677777776665443
No 103
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=1.2e-14 Score=119.27 Aligned_cols=89 Identities=16% Similarity=0.043 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC--------------eEEEcCCCCC--CCCCCceeEEEcc---
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNL--PFFDEAFDVAFTA--- 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~--------------~~~~~d~~~~--~~~~~~fD~V~~~--- 155 (229)
.+|.+|||||||+|..+..+++.+..+++++|+++.++ .++.+|+.+. ++++++||.|+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 68899999999999999999988445999999998733 3677777653 5778999999853
Q ss_pred --cchhhh-CHHHHHHHHHhccccCcEEEEE
Q 027039 156 --HLAEAL-FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 156 --~~~~~~-~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...++. ++..+++++.|+|||||++++.
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 333344 7889999999999999998765
No 104
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.47 E-value=8e-13 Score=113.26 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=97.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
+++..+|||||||+|..+..+++. +..+++++|+ +. .++++.+|+. .+++. +||+|++.+
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 356789999999999999999887 5569999998 54 3668899987 34544 899999999
Q ss_pred chhhh-CH--HHHHHHHHhccccCcEEEEEeecC-------------------CcccHHHHHHHHhcCceeEeeeeeecC
Q 027039 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLMEEC-------------------AGREIKQIVELFRTSRFVDAANVTVNG 214 (229)
Q Consensus 157 ~~~~~-~~--~~~l~~~~~~LkpgG~lil~~~~~-------------------~~~~~~~l~~l~~~~~~~~~~~~~~~~ 214 (229)
+.++. ++ .+++++++++|||||++++.-... ..++..++.+++.+.+|..++.....+
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~ 323 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPISY 323 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECSS
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECCC
Confidence 88888 43 789999999999999998754321 134577888999999998887765554
Q ss_pred CeeEEEEEE
Q 027039 215 SNMTRILMR 223 (229)
Q Consensus 215 ~~~~~~~~~ 223 (229)
..++..+
T Consensus 324 --~~vie~r 330 (332)
T 3i53_A 324 --VSIVEMT 330 (332)
T ss_dssp --SEEEEEE
T ss_pred --cEEEEEe
Confidence 4555544
No 105
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.46 E-value=2.7e-13 Score=109.10 Aligned_cols=114 Identities=15% Similarity=0.070 Sum_probs=85.5
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCCCCCCCCceeEEE
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~~~~~~~~fD~V~ 153 (229)
.+++.+|||||||+|..+..+++. +..+|+|+|+++. .+.++++|+.++|+++++ |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 368899999999999999999998 4569999999986 235889999999987766 7766
Q ss_pred cc---cch--hhh-CHHHHHHHHHhccccCcEEEEEeecCCc----------------ccHHHHHHHHhcCceeEee
Q 027039 154 TA---HLA--EAL-FPSRFVGEMERTVKIGGVCMVLMEECAG----------------REIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 154 ~~---~~~--~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~----------------~~~~~l~~l~~~~~~~~~~ 208 (229)
.. ... ++. ++.++++++.++|||||.+++....... +....+.+++...+|.-..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 43 222 244 6789999999999999999986543210 1123366678877775443
No 106
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.46 E-value=3.5e-13 Score=110.60 Aligned_cols=101 Identities=17% Similarity=0.249 Sum_probs=78.4
Q ss_pred HHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCce
Q 027039 84 FFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAF 149 (229)
Q Consensus 84 ~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~f 149 (229)
++..++......++.+|||+|||+|..+..+++.|. +++|+|+++. .+.++++|+.+++++ ++|
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~f 106 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEF 106 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCE
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCc
Confidence 333333333346778999999999999999999876 9999999976 356899999988764 689
Q ss_pred eEEEcc-cchhhh---CHHHHHHHHHhccccCcEEEEEeec
Q 027039 150 DVAFTA-HLAEAL---FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 150 D~V~~~-~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
|+|++. ....+. ++.++++++.++|||||.+++.+..
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 999975 223332 4578999999999999999876543
No 107
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.45 E-value=1.2e-12 Score=107.21 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=83.6
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC-------------CCeEEEcCCCCCC---CCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-------------LPLVSRADPHNLP---FFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~-------------~~~~~~~d~~~~~---~~~~~fD~V~ 153 (229)
..++++.+|||+|||+|..+..+++. +.++|+|+|+++. .+.++.+|+.... ...++||+|+
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 34789999999999999999999987 4679999999984 3458889987642 1246899999
Q ss_pred cccchhhhCHHHH-HHHHHhccccCcEEEEEeecCC-------cccHHHHHHHHhcCceeEeeeeee
Q 027039 154 TAHLAEALFPSRF-VGEMERTVKIGGVCMVLMEECA-------GREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 154 ~~~~~~~~~~~~~-l~~~~~~LkpgG~lil~~~~~~-------~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
++... .+..+. ...+.+.|||||++++.+.... ...+....+.++..+|.-++.++.
T Consensus 152 ~d~a~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 152 VDIAQ--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp ECCCC--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEEC
T ss_pred ecCCC--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 97322 234444 4566669999999998753311 223344455556666766666655
No 108
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.45 E-value=4e-12 Score=108.81 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=96.4
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC----------------CeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
+++ .+|||||||+|..+..+++. +..+++++|+ +.+ +.++.+|+.+ +++ ++||+|++.+
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~ 241 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR 241 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch
Confidence 455 89999999999999999987 5569999999 663 4588899887 554 6899999998
Q ss_pred chhhh-CH--HHHHHHHHhccccCcEEEEEeec----------------------CCcccHHHHHHHHhcCceeEeeeee
Q 027039 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLMEE----------------------CAGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 157 ~~~~~-~~--~~~l~~~~~~LkpgG~lil~~~~----------------------~~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
+.++. ++ .++++++.+.|||||++++.-.. ....+..++.++++..+|..++...
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 88876 34 38999999999999999876321 1123567788899999998877666
Q ss_pred ecCCeeEEEEEE
Q 027039 212 VNGSNMTRILMR 223 (229)
Q Consensus 212 ~~~~~~~~~~~~ 223 (229)
..+. ..++..+
T Consensus 322 ~~~~-~~~i~~~ 332 (334)
T 2ip2_A 322 LPME-TRMIVAA 332 (334)
T ss_dssp ETTT-EEEEEEE
T ss_pred CCCC-CEEEEEE
Confidence 5443 3455544
No 109
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=1.9e-13 Score=107.77 Aligned_cols=92 Identities=17% Similarity=0.069 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC--CCCCceeEEEcccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP--FFDEAFDVAFTAHL 157 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~--~~~~~fD~V~~~~~ 157 (229)
.++.+|||+|||+|..+..++..+..+|+|+|+++. .++++++|+.+.+ +++++||+|+++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 478899999999999999888887779999999976 2458889988753 44789999999855
Q ss_pred hhh--hCHHHHHHHHHh--ccccCcEEEEEeec
Q 027039 158 AEA--LFPSRFVGEMER--TVKIGGVCMVLMEE 186 (229)
Q Consensus 158 ~~~--~~~~~~l~~~~~--~LkpgG~lil~~~~ 186 (229)
.++ .+..++++++.+ +|||||.+++....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 444 257889999999 99999999887665
No 110
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.45 E-value=6e-13 Score=110.19 Aligned_cols=117 Identities=16% Similarity=0.149 Sum_probs=92.9
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC--------------CeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
+.++.+|||+|||+|.++..+++.|. +|+|+|+++.+ +.+.++|..+. +++++||+|+++...+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHH
Confidence 47889999999999999999999877 99999999873 45777776652 4467899999976544
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCe
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSN 216 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 216 (229)
+ ...++.++.+.|||||.+++.... ......+.+.++..+|..+......++.
T Consensus 196 ~--~~~~l~~~~~~LkpgG~lils~~~--~~~~~~v~~~l~~~Gf~~~~~~~~~~W~ 248 (254)
T 2nxc_A 196 L--HAALAPRYREALVPGGRALLTGIL--KDRAPLVREAMAGAGFRPLEEAAEGEWV 248 (254)
T ss_dssp H--HHHHHHHHHHHEEEEEEEEEEEEE--GGGHHHHHHHHHHTTCEEEEEEEETTEE
T ss_pred H--HHHHHHHHHHHcCCCCEEEEEeec--cCCHHHHHHHHHHCCCEEEEEeccCCeE
Confidence 2 467899999999999998875433 3457788899998888877766666653
No 111
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.45 E-value=1.3e-12 Score=112.80 Aligned_cols=126 Identities=14% Similarity=0.043 Sum_probs=96.2
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
..++++.+|||||||+|..+..+++. +..+++++|+++. .+.++.+|+. .+++ +||+|++.++
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 34577899999999999999999887 5568999997421 3668899986 3444 8999999998
Q ss_pred hhhh-CH--HHHHHHHHhccccCcEEEEEeecC----------------------CcccHHHHHHHHhcCceeEeeeeee
Q 027039 158 AEAL-FP--SRFVGEMERTVKIGGVCMVLMEEC----------------------AGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 158 ~~~~-~~--~~~l~~~~~~LkpgG~lil~~~~~----------------------~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
.++. ++ .+++++++++|||||++++.-... ...+..++.+++++.+|..++...
T Consensus 257 lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~- 335 (348)
T 3lst_A 257 LHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG- 335 (348)
T ss_dssp GGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE-
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE-
Confidence 8888 44 589999999999999998754211 123577888999999998887766
Q ss_pred cCCeeEEEE
Q 027039 213 NGSNMTRIL 221 (229)
Q Consensus 213 ~~~~~~~~~ 221 (229)
.++...++.
T Consensus 336 ~~~~~~vie 344 (348)
T 3lst_A 336 TSSVMSIAV 344 (348)
T ss_dssp CSSSCEEEE
T ss_pred CCCCcEEEE
Confidence 343334443
No 112
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.45 E-value=1.1e-13 Score=111.60 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCC--CCCCceeEEEccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLP--FFDEAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~--~~~~~fD~V~~~~ 156 (229)
.++.+|||||||+|.++..+++. +..+++|+|+++. .+.++++|+.+++ +++++||.|+++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 46789999999999999999987 5569999999975 3568889998865 6788999998763
Q ss_pred chh-----h----hCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 157 LAE-----A----LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 157 ~~~-----~----~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
... | +....+++++.++|||||.+++.++. ........+.+...++
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~--~~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN--RGLFEYSLKSFSEYGL 171 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC--HHHHHHHHHHHHHHTC
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCC
Confidence 211 1 11368999999999999999877754 2223445555555444
No 113
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.44 E-value=1.8e-12 Score=110.87 Aligned_cols=119 Identities=13% Similarity=0.189 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
.++.+|||||||+|..+..+++. +..+++++|++ . .+.++.+|+.+.+++++ ||+|++.++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~ 241 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNF 241 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcch
Confidence 67889999999999999999987 55599999998 4 26689999988777554 999999988
Q ss_pred hhhhC-H--HHHHHHHHhccccCcEEEEEeecC------------------------CcccHHHHHHHHhcCceeEeeee
Q 027039 158 AEALF-P--SRFVGEMERTVKIGGVCMVLMEEC------------------------AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 158 ~~~~~-~--~~~l~~~~~~LkpgG~lil~~~~~------------------------~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
.++.. + .++++++.++|||||++++.-... ..++..++.+++++.+|..++..
T Consensus 242 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 242 LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 88772 3 689999999999999988664321 12346788889999998877766
Q ss_pred eecCC
Q 027039 211 TVNGS 215 (229)
Q Consensus 211 ~~~~~ 215 (229)
...+.
T Consensus 322 ~~~~~ 326 (335)
T 2r3s_A 322 SLPTT 326 (335)
T ss_dssp CCTTS
T ss_pred ECCCC
Confidence 55554
No 114
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.44 E-value=3.5e-13 Score=118.01 Aligned_cols=109 Identities=20% Similarity=0.231 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccchhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~ 160 (229)
.++.+|||+|||+|.++..+++.+. +|+++|+++. .+.++.+|+.+.+.++++||+|+++...++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 4778999999999999999999976 9999999976 356899999998776789999999855444
Q ss_pred -----h-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 161 -----L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 161 -----~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
. ...++++++.+.|||||.++++......+ ...+.+.|+.++.+
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~-~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKY-EPLLEEKFGAFQTL 360 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCH-HHHHHHHHSCCEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCCh-HHHHHHhhccEEEE
Confidence 2 46789999999999999999877664332 24466777765544
No 115
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.44 E-value=7.9e-13 Score=107.62 Aligned_cols=120 Identities=15% Similarity=0.131 Sum_probs=86.9
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC-------------CCeEEEcCCCC---CCCCCCceeEE
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-------------LPLVSRADPHN---LPFFDEAFDVA 152 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~-------------~~~~~~~d~~~---~~~~~~~fD~V 152 (229)
...++++.+|||+|||+|.++..+++. +.++|+|+|+++. .+.++.+|+.+ +++.+++||+|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEE
Confidence 334678999999999999999999987 3469999999953 45688999987 45567899999
Q ss_pred EcccchhhhC-HHHHHHHHHhccccCcEEEEEeecC---Cccc----HHHHHHHHhcCceeEeeeeee
Q 027039 153 FTAHLAEALF-PSRFVGEMERTVKIGGVCMVLMEEC---AGRE----IKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 153 ~~~~~~~~~~-~~~~l~~~~~~LkpgG~lil~~~~~---~~~~----~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+++.. ..+ ...++.++.+.|||||.+++.+... .... +.+-.+.+...+|..++....
T Consensus 152 ~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 217 (233)
T 2ipx_A 152 FADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTL 217 (233)
T ss_dssp EECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEEC
T ss_pred EEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEec
Confidence 99643 122 2556889999999999999866541 1111 111146677778876664443
No 116
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.44 E-value=2.1e-13 Score=115.89 Aligned_cols=92 Identities=12% Similarity=0.124 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC---------------------eEEEcCC------CCC--CCC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP---------------------LVSRADP------HNL--PFF 145 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~---------------------~~~~~d~------~~~--~~~ 145 (229)
.++.+|||||||+|..+..++..+..+|+|+|+|+.++ ++.+.|+ .++ +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 35789999999999877777666556999999998732 3556666 222 356
Q ss_pred CCceeEEEcccchhhh----CHHHHHHHHHhccccCcEEEEEeec
Q 027039 146 DEAFDVAFTAHLAEAL----FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~----~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++||+|+|....++. +..+++++++++|||||.+++.+..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999998665543 4578999999999999999877764
No 117
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.44 E-value=9.9e-13 Score=114.29 Aligned_cols=129 Identities=10% Similarity=0.097 Sum_probs=101.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCC--CCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNL--PFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~--~~~~~~fD~V~~~ 155 (229)
....+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 46789999999999999999886 5569999998 43 356899999885 565 789999999
Q ss_pred cchhhhC-H--HHHHHHHHhccccCcEEEEEeecC---------------------------CcccHHHHHHHHhcCcee
Q 027039 156 HLAEALF-P--SRFVGEMERTVKIGGVCMVLMEEC---------------------------AGREIKQIVELFRTSRFV 205 (229)
Q Consensus 156 ~~~~~~~-~--~~~l~~~~~~LkpgG~lil~~~~~---------------------------~~~~~~~l~~l~~~~~~~ 205 (229)
++.++.. + .++++++.++|||||++++.-... ..++..++.+++.+.+|.
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~ 335 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLE 335 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCe
Confidence 8887763 3 578999999999999988653211 123577888999999999
Q ss_pred EeeeeeecCCeeEEEEEEec
Q 027039 206 DAANVTVNGSNMTRILMRRT 225 (229)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ 225 (229)
.++.....|....++..++.
T Consensus 336 ~v~~~~~~g~~~svi~~~~~ 355 (363)
T 3dp7_A 336 VEEIQDNIGLGHSILQCRLK 355 (363)
T ss_dssp ESCCCCCBTTTBEEEEEEEC
T ss_pred EEEEEeCCCCCceEEEEeec
Confidence 98888777776566665554
No 118
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=2.2e-13 Score=117.95 Aligned_cols=88 Identities=17% Similarity=0.233 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
+.++.+|||||||+|.++..+++.|..+|+|+|+++. .+.++++|+.++++++++||+|+++.+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3678999999999999999999998789999999951 2679999999999888999999996432
Q ss_pred ---hh-hCHHHHHHHHHhccccCcEEE
Q 027039 159 ---EA-LFPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 159 ---~~-~~~~~~l~~~~~~LkpgG~li 181 (229)
.+ ..+..++.++.++|||||.++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 22 267889999999999999975
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.44 E-value=5.5e-13 Score=115.06 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=75.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCC---------------CCCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD---------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~---------------~~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
...++.+|||||||+|.++..+++.|..+|+|+|+++ ..+.++++|+.++++++++||+|+++.+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 3478899999999999999999998777999999995 2356899999999888899999998753
Q ss_pred ---hhhh-CHHHHHHHHHhccccCcEEE
Q 027039 158 ---AEAL-FPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 158 ---~~~~-~~~~~l~~~~~~LkpgG~li 181 (229)
..+. .+..++.++.++|||||.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3333 46789999999999999987
No 120
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.44 E-value=4.1e-12 Score=110.64 Aligned_cols=127 Identities=12% Similarity=0.032 Sum_probs=98.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhhC-
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALF- 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~- 162 (229)
+.+..+|||||||+|..+..+++. +..+++++|+ +. .++++.+|+.+ +++++ |+|++.++.|+..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 567889999999999999999887 6668999998 33 46699999987 66654 9999998888773
Q ss_pred H--HHHHHHHHhccccCcEEEEEeec---------------------------CCcccHHHHHHHHhcCceeEeeeeeec
Q 027039 163 P--SRFVGEMERTVKIGGVCMVLMEE---------------------------CAGREIKQIVELFRTSRFVDAANVTVN 213 (229)
Q Consensus 163 ~--~~~l~~~~~~LkpgG~lil~~~~---------------------------~~~~~~~~l~~l~~~~~~~~~~~~~~~ 213 (229)
+ .+++++++++|||||++++.-.. ...++..++.++++..+|..++.....
T Consensus 277 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~ 356 (368)
T 3reo_A 277 EHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCA 356 (368)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEeC
Confidence 3 47899999999999998875321 112346678889999999998887777
Q ss_pred CCeeEEEEEEec
Q 027039 214 GSNMTRILMRRT 225 (229)
Q Consensus 214 ~~~~~~~~~~~~ 225 (229)
+.. ..+.++++
T Consensus 357 ~~~-~vie~~k~ 367 (368)
T 3reo_A 357 FNT-YVMEFLKT 367 (368)
T ss_dssp TTE-EEEEEECC
T ss_pred CCc-EEEEEEeC
Confidence 664 45555543
No 121
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.43 E-value=3.7e-13 Score=113.60 Aligned_cols=90 Identities=17% Similarity=0.094 Sum_probs=72.6
Q ss_pred cccCCCCCeEEEEcCCCChhh-HHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEc
Q 027039 91 KSLLFNHSKVLCVSAGAGHEV-MAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~-~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
...++++.+|||||||+|..+ ..+++...++|+|+|+++. .++++++|+.+++ +++||+|++
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~ 194 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMV 194 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEE
Confidence 346789999999999998765 4456553349999999986 3558899998876 789999998
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
... ..++.++++++.++|||||++++..
T Consensus 195 ~a~--~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AAL--AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTT--CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCC--ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 544 2378899999999999999988654
No 122
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.43 E-value=2.1e-12 Score=111.81 Aligned_cols=127 Identities=14% Similarity=0.081 Sum_probs=97.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC----------------CeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.++++.+|||||||+|..+..+++. +..+++++|+ +.+ +.++.+|+.+.++++. |+|++.
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~ 263 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFC 263 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEe
Confidence 4577899999999999999999987 5559999999 652 6688999998877554 999999
Q ss_pred cchhhh-C--HHHHHHHHHhccccCcEEEEEeec---------------------CCc----ccHHHHHHHHhcCceeEe
Q 027039 156 HLAEAL-F--PSRFVGEMERTVKIGGVCMVLMEE---------------------CAG----REIKQIVELFRTSRFVDA 207 (229)
Q Consensus 156 ~~~~~~-~--~~~~l~~~~~~LkpgG~lil~~~~---------------------~~~----~~~~~l~~l~~~~~~~~~ 207 (229)
.+.++. + ..++++++.++|||||++++.-.. ... .+..++.+++++.+|..+
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v 343 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDV 343 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEE
T ss_pred chhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceE
Confidence 888877 3 588999999999999999765411 111 567788888988888776
Q ss_pred eeeeecCCeeEEEEEEe
Q 027039 208 ANVTVNGSNMTRILMRR 224 (229)
Q Consensus 208 ~~~~~~~~~~~~~~~~~ 224 (229)
+..... ...++..+|
T Consensus 344 ~~~~~~--~~~vi~a~k 358 (359)
T 1x19_A 344 TMVRKY--DHLLVQAVK 358 (359)
T ss_dssp EEEEET--TEEEEEEEC
T ss_pred EEEecC--CceEEEEeC
Confidence 665544 334555443
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=5.3e-13 Score=104.30 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=83.3
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCC-CceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFD-EAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~-~~fD~V~~~ 155 (229)
...++.+|||+|||+|..+..+++.+ .+++++|+++. .+.+..+|+.+ ++++ ++||+|+++
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVG 107 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEES
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEEC
Confidence 45788999999999999999999987 69999999874 34577777766 2333 589999997
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
...+ +..++++++.++|||||.+++.... .....++.+.+++.++
T Consensus 108 ~~~~--~~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 108 GSGG--ELQEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGF 152 (192)
T ss_dssp CCTT--CHHHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred CchH--HHHHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCC
Confidence 6543 4688999999999999998876654 4455667777776665
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.41 E-value=1.4e-12 Score=106.89 Aligned_cols=111 Identities=13% Similarity=0.228 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------------CCeEEEcCCCC-CC--CCCCce
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------------LPLVSRADPHN-LP--FFDEAF 149 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------------~~~~~~~d~~~-~~--~~~~~f 149 (229)
.++.+|||||||+|.++..+++. +...++|+|+++. .+.++++|+.+ ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 56789999999999999999987 5669999999853 35688999987 66 778999
Q ss_pred eEEEcccchhhh---------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc-eeEe
Q 027039 150 DVAFTAHLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR-FVDA 207 (229)
Q Consensus 150 D~V~~~~~~~~~---------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~-~~~~ 207 (229)
|.|+++....+. ....+++++.++|||||.+++.++. ..-.....+.+...+ |..+
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHTSTTEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCcccc
Confidence 999976322111 0147999999999999999877764 222334455555443 4443
No 125
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.41 E-value=4.3e-12 Score=109.38 Aligned_cols=133 Identities=15% Similarity=0.102 Sum_probs=99.4
Q ss_pred HHhcccCCC-CCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCC-CCCCc
Q 027039 88 LQGKSLLFN-HSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLP-FFDEA 148 (229)
Q Consensus 88 l~~~~~~~~-~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~-~~~~~ 148 (229)
++....+.+ +.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+.+ +.++.
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 333333455 889999999999999999987 5569999999 43 2668999998865 23567
Q ss_pred eeEEEcccchhhhC-H--HHHHHHHHhccccCcEEEEEeec------------------------CCcccHHHHHHHHhc
Q 027039 149 FDVAFTAHLAEALF-P--SRFVGEMERTVKIGGVCMVLMEE------------------------CAGREIKQIVELFRT 201 (229)
Q Consensus 149 fD~V~~~~~~~~~~-~--~~~l~~~~~~LkpgG~lil~~~~------------------------~~~~~~~~l~~l~~~ 201 (229)
||+|++.++.++.. + .++++++.+.|||||++++.-.. ...++..++.+++..
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred ccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 99999999888773 3 78999999999999999876421 123456778899999
Q ss_pred CceeEeeeeeecCCeeEEEEEEe
Q 027039 202 SRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
.+|..++.. .|. ...++.+|
T Consensus 329 aGf~~~~~~--~g~-~~l~~a~k 348 (352)
T 3mcz_A 329 AGLAVGERS--IGR-YTLLIGQR 348 (352)
T ss_dssp TTCEEEEEE--ETT-EEEEEEEC
T ss_pred CCCceeeec--cCc-eEEEEEec
Confidence 999888743 333 34444444
No 126
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.41 E-value=3.3e-12 Score=111.19 Aligned_cols=117 Identities=15% Similarity=0.088 Sum_probs=91.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
++++.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+ ++++ ||+|+++++.++. +
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD 282 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCH
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCH
Confidence 567889999999999999999987 5558999997 43 36688999987 6654 9999999988887 5
Q ss_pred HH--HHHHHHHhccccCcEEEEEe---ecC-----------------------CcccHHHHHHHHhcCceeEeeeee-ec
Q 027039 163 PS--RFVGEMERTVKIGGVCMVLM---EEC-----------------------AGREIKQIVELFRTSRFVDAANVT-VN 213 (229)
Q Consensus 163 ~~--~~l~~~~~~LkpgG~lil~~---~~~-----------------------~~~~~~~l~~l~~~~~~~~~~~~~-~~ 213 (229)
+. ++++++.++|||||++++.- +.. ..++..++.+++++.+|..++... ..
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~ 362 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAF 362 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 55 89999999999999998762 211 123456777888888888777665 34
Q ss_pred C
Q 027039 214 G 214 (229)
Q Consensus 214 ~ 214 (229)
|
T Consensus 363 ~ 363 (372)
T 1fp1_D 363 N 363 (372)
T ss_dssp T
T ss_pred C
Confidence 4
No 127
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.41 E-value=2.5e-12 Score=106.84 Aligned_cols=106 Identities=20% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------C---------CeEEEcCCCCC-------CCCC
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------L---------PLVSRADPHNL-------PFFD 146 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------~---------~~~~~~d~~~~-------~~~~ 146 (229)
..++.+|||+|||+|..+..++.. +..+|+|+|+++. . +.++++|+.+. ++++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 457889999999999999999988 4569999999865 1 56889999886 3567
Q ss_pred CceeEEEcc--cch--------------hhh---CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 147 EAFDVAFTA--HLA--------------EAL---FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 147 ~~fD~V~~~--~~~--------------~~~---~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
++||+|+++ +.. .+. ....+++++.++|||||.++++.+. ....++.+.++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~~~ 185 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP---QSVAEIIAACGSR 185 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG---GGHHHHHHHHTTT
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH---HHHHHHHHHHHhc
Confidence 899999998 111 111 3578899999999999999987764 3556677777653
No 128
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.41 E-value=9.7e-13 Score=110.38 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC----------------CeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------PLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~----------------~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
++++.+|||+|||+|.++..++..+..+|+|+|+++.+ +.++++|+.+.+. +++||+|+++..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 37799999999999999999999865479999999762 4588999999876 789999999644
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEEeecC----CcccHHHHHHHHhcCce
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVLMEEC----AGREIKQIVELFRTSRF 204 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~~~~~----~~~~~~~l~~l~~~~~~ 204 (229)
.. ..+++.++.++|||||.+++..... .....+.+.+.++..++
T Consensus 202 ~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~ 249 (278)
T 2frn_A 202 VR---THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGY 249 (278)
T ss_dssp SS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTC
T ss_pred hh---HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCC
Confidence 32 4678899999999999988765542 23456677777775544
No 129
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.41 E-value=4.8e-12 Score=109.92 Aligned_cols=129 Identities=19% Similarity=0.134 Sum_probs=96.5
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
++++.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+ +++. .||+|++++
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 467889999999999999999987 4559999998 54 36688999876 3433 499999998
Q ss_pred chhhh-CH--HHHHHHHHhccccCcEEEEEee--cC----------------------CcccHHHHHHHHhcCceeEeee
Q 027039 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLME--EC----------------------AGREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 157 ~~~~~-~~--~~~l~~~~~~LkpgG~lil~~~--~~----------------------~~~~~~~l~~l~~~~~~~~~~~ 209 (229)
+.++. ++ .++++++.++|||||++++... .. ...+..++.+++...+|..++.
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 88877 44 3899999999999999886543 21 1136778888999999987766
Q ss_pred eeecCCee----EEEEEEec
Q 027039 210 VTVNGSNM----TRILMRRT 225 (229)
Q Consensus 210 ~~~~~~~~----~~~~~~~~ 225 (229)
....+... ..+..++.
T Consensus 337 ~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 337 RTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEECCSSCSSCEEEEEEEEC
T ss_pred EECCCCcccCCcEEEEEEEC
Confidence 55544320 45555553
No 130
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.40 E-value=1.1e-12 Score=107.97 Aligned_cols=114 Identities=13% Similarity=0.083 Sum_probs=91.2
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~ 153 (229)
..+.++.+|||+|||+|..+..+++. + ..+++++|+++. .+.+.++|+.+.++++++||+|+
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~ 171 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVA 171 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEE
Confidence 35678999999999999999999987 4 569999999863 35688899988878788999999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeee
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
++ . .++.++++++.++|||||.+++.... .....++.+.++..+|..++...
T Consensus 172 ~~-~---~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 172 LD-L---MEPWKVLEKAALALKPDRFLVAYLPN--ITQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp EE-S---SCGGGGHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHTTTTEEEEEEEE
T ss_pred EC-C---cCHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHHCCCceEEEEE
Confidence 83 1 25678999999999999998877765 34566777777777777655443
No 131
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.40 E-value=6.1e-13 Score=113.00 Aligned_cols=92 Identities=13% Similarity=0.168 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC----------------------CeEEEcCCCCCC----CC--C
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------------------PLVSRADPHNLP----FF--D 146 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~----------------------~~~~~~d~~~~~----~~--~ 146 (229)
.++.+|||+|||+|..+..+++.+..+++|+|+++.+ +.++++|+.+.+ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4788999999999999999998766699999999762 468899999876 53 4
Q ss_pred CceeEEEcccchhhh-----CHHHHHHHHHhccccCcEEEEEeec
Q 027039 147 EAFDVAFTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~-----~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++||+|+++...++. ++..+++++.++|||||.+++.+..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999998766554 3478999999999999999987765
No 132
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.40 E-value=1.1e-12 Score=109.49 Aligned_cols=90 Identities=19% Similarity=0.074 Sum_probs=70.8
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEE--EcCCCCCCCCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVS--RADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~--~~d~~~~~~~~~~fD~V~ 153 (229)
..++++.+|||+|||+|.++..+++. ++|+|+|+++. .+.++ ++|+.+++ +++||+|+
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 45688999999999999999999998 59999999874 13567 88888876 68999999
Q ss_pred cccchhhh-C----HH---HHHHHHHhccccCc--EEEEEeec
Q 027039 154 TAHLAEAL-F----PS---RFVGEMERTVKIGG--VCMVLMEE 186 (229)
Q Consensus 154 ~~~~~~~~-~----~~---~~l~~~~~~LkpgG--~lil~~~~ 186 (229)
|+.. ++. + .. .++.++.++||||| .+++-+-.
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9743 211 1 11 37899999999999 88765543
No 133
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.40 E-value=3.3e-12 Score=103.37 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=72.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC-------------CCeEEEcCCCCCC---CCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS-------------LPLVSRADPHNLP---FFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~-------------~~~~~~~d~~~~~---~~~~~fD~V~~ 154 (229)
.++++.+|||+|||+|.++..+++. | .++|+|+|+++. .+.++++|+.+.. ..+++||+|++
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 3578899999999999999999987 4 469999999983 4568899998732 12468999998
Q ss_pred ccchhhhC-HHHHHHHHHhccccCcEEEEEeec
Q 027039 155 AHLAEALF-PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 155 ~~~~~~~~-~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.. ..+ ...++.++.+.|||||.+++.+..
T Consensus 150 ~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 180 (227)
T 1g8a_A 150 DVA--QPTQAKILIDNAEVYLKRGGYGMIAVKS 180 (227)
T ss_dssp CCC--STTHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCC--CHhHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 643 222 345599999999999999987543
No 134
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.40 E-value=9.5e-13 Score=109.18 Aligned_cols=87 Identities=23% Similarity=0.262 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhhCH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALFP 163 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~ 163 (229)
.++.+|||||||+|..+..+++. +..+++|+|+++. .+.+..+|+.++++++++||+|+++...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 57889999999999999999987 3459999999976 3568999999999989999999986542
Q ss_pred HHHHHHHHhccccCcEEEEEeecC
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
.+++++.++|||||.+++.+...
T Consensus 159 -~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 -CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -hhHHHHHHhcCCCcEEEEEEcCH
Confidence 35899999999999999887764
No 135
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.39 E-value=6.2e-12 Score=109.39 Aligned_cols=126 Identities=11% Similarity=0.060 Sum_probs=96.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCC--------CCCeEEEcCCCCCCCCCCceeEEEcccchhhhC--
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD--------SLPLVSRADPHNLPFFDEAFDVAFTAHLAEALF-- 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~--------~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~-- 162 (229)
+++..+|||||||+|..+..+++. +..+++++|+.. ..+.++.+|+.+ |++++ |+|++.++.|+..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQ 275 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHH
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHH
Confidence 567899999999999999999887 666899999831 146799999988 77654 9999998888763
Q ss_pred -HHHHHHHHHhccccCcEEEEEeec---------------------------CCcccHHHHHHHHhcCceeEeeeeeecC
Q 027039 163 -PSRFVGEMERTVKIGGVCMVLMEE---------------------------CAGREIKQIVELFRTSRFVDAANVTVNG 214 (229)
Q Consensus 163 -~~~~l~~~~~~LkpgG~lil~~~~---------------------------~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 214 (229)
..+++++++++|||||++++.-.. ...++..++.++++..+|..++.....+
T Consensus 276 ~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~ 355 (364)
T 3p9c_A 276 HCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYA 355 (364)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEEcCC
Confidence 357899999999999999875211 1123456788889999998888777666
Q ss_pred CeeEEEEEE
Q 027039 215 SNMTRILMR 223 (229)
Q Consensus 215 ~~~~~~~~~ 223 (229)
.. .++.++
T Consensus 356 ~~-~vie~~ 363 (364)
T 3p9c_A 356 NA-WAIEFT 363 (364)
T ss_dssp TE-EEEEEE
T ss_pred ce-EEEEEe
Confidence 54 344433
No 136
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.39 E-value=1.1e-12 Score=114.70 Aligned_cols=93 Identities=20% Similarity=0.201 Sum_probs=76.9
Q ss_pred HhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEE
Q 027039 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVA 152 (229)
Q Consensus 89 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V 152 (229)
.......++.+|||||||+|.++..+++.|..+|+|+|++ . .+.++++|+.+++++ ++||+|
T Consensus 56 ~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~I 133 (376)
T 3r0q_C 56 FQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVI 133 (376)
T ss_dssp HTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEE
T ss_pred HhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEE
Confidence 3334457889999999999999999999987799999999 5 256999999998876 899999
Q ss_pred Ecccchhhh----CHHHHHHHHHhccccCcEEEEE
Q 027039 153 FTAHLAEAL----FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 153 ~~~~~~~~~----~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+++.+.+.. .+..++.++.+.|||||.+++.
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 996443333 4788999999999999997643
No 137
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=2.1e-12 Score=100.24 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=82.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
...++.+|||+|||+|..+..+++ +..+++|+|+++. .+.++++|+.+ ++++++||+|+++..
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc
Confidence 346788999999999999999999 5569999999975 35688888877 666789999999877
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
.++.++++++.+. |||.+++.... .....++.+.+++.+
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANTIV--LENAAKIINEFESRG 148 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEESC--HHHHHHHHHHHHHTT
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEecc--cccHHHHHHHHHHcC
Confidence 5678899999998 99998876644 445667777777665
No 138
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.39 E-value=2.5e-13 Score=118.73 Aligned_cols=89 Identities=16% Similarity=0.230 Sum_probs=72.8
Q ss_pred CCCCeEEEEcCC------CChhhHHHHhC--CCCeEEEecCCCCC------CeEEEcCCCCCCCC------CCceeEEEc
Q 027039 95 FNHSKVLCVSAG------AGHEVMAFNSI--GVADVTGVELMDSL------PLVSRADPHNLPFF------DEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G------~G~~~~~l~~~--g~~~v~~vD~s~~~------~~~~~~d~~~~~~~------~~~fD~V~~ 154 (229)
.++.+||||||| +|..+..++.. +.++|+|+|+++.+ +.++++|+.++++. +++||+|++
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVis 294 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVID 294 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEE
Confidence 567899999999 66667766654 56699999999884 56999999998876 789999999
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+...+..++..+++++.++|||||.+++.
T Consensus 295 dgsH~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 295 DGSHINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CSCCCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCcccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 75432236789999999999999998864
No 139
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.39 E-value=1.2e-12 Score=109.93 Aligned_cols=92 Identities=13% Similarity=0.037 Sum_probs=71.4
Q ss_pred hcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEE--EcCCCCCCCCCCceeE
Q 027039 90 GKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVS--RADPHNLPFFDEAFDV 151 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~--~~d~~~~~~~~~~fD~ 151 (229)
....++++.+|||+|||+|.++..+++. ++|+|+|+++. .+.++ ++|+.+++ +++||+
T Consensus 76 ~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 76 ERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp HTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred HcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCE
Confidence 3355688999999999999999999998 59999999873 23477 78888865 689999
Q ss_pred EEcccchhh-----hCHH---HHHHHHHhccccCc--EEEEEeec
Q 027039 152 AFTAHLAEA-----LFPS---RFVGEMERTVKIGG--VCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~~~-----~~~~---~~l~~~~~~LkpgG--~lil~~~~ 186 (229)
|+|+.. .+ .+.. +++.++.++||||| .+++-+-.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999743 21 1111 47899999999999 88765443
No 140
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.39 E-value=8.5e-13 Score=107.46 Aligned_cols=90 Identities=12% Similarity=0.076 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-C------------------CeEEEcCCCCCCCC-CCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-L------------------PLVSRADPHNLPFF-DEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-~------------------~~~~~~d~~~~~~~-~~~fD~V~ 153 (229)
+++.+|||||||+|..+..+++. +..+|+|+|+|+. + +.++++|+.++|.. .+.+|.|+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 67889999999999999999965 4558999999943 2 34888898888632 25677777
Q ss_pred cccch----hhh--CHHHHHHHHHhccccCcEEEEEe
Q 027039 154 TAHLA----EAL--FPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 154 ~~~~~----~~~--~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
++... .+. ++.++++++.++|||||.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 65321 111 34678999999999999998843
No 141
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.39 E-value=1.1e-12 Score=109.56 Aligned_cols=114 Identities=19% Similarity=0.172 Sum_probs=88.7
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEE
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVA 152 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V 152 (229)
...++++.+|||+|||+|..+..+++. +..+++++|+++. .+.++.+|+.+ ++++++||+|
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~V 183 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAV 183 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEE
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEE
Confidence 345678899999999999999999986 4469999999863 35688888887 5667899999
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeee
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
+++ . .++.++++++.++|||||.+++.... ......+.+.+...+|..++...
T Consensus 184 i~~-~---~~~~~~l~~~~~~LkpgG~l~i~~~~--~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 184 IAD-I---PDPWNHVQKIASMMKPGSVATFYLPN--FDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEC-C---SCGGGSHHHHHHTEEEEEEEEEEESS--HHHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEc-C---cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCeEEEEEE
Confidence 982 2 25778999999999999998877754 33556677777777776655543
No 142
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=1.8e-11 Score=105.80 Aligned_cols=128 Identities=16% Similarity=0.121 Sum_probs=95.8
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
++++.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+ +++. .||+|++.+
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF 257 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc
Confidence 467889999999999999999987 4458999998 54 35688999876 3333 499999998
Q ss_pred chhhh-CH--HHHHHHHHhccccCcEEEEEeec----C-------------------CcccHHHHHHHHhcCceeEeeee
Q 027039 157 LAEAL-FP--SRFVGEMERTVKIGGVCMVLMEE----C-------------------AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 157 ~~~~~-~~--~~~l~~~~~~LkpgG~lil~~~~----~-------------------~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+.++. ++ .++++++.++|||||++++.... . ...+..++.+++++.+|..++..
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVR 337 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEE
Confidence 88877 33 47999999999999998876432 1 12356778889999998877666
Q ss_pred eecCC----eeEEEEEEe
Q 027039 211 TVNGS----NMTRILMRR 224 (229)
Q Consensus 211 ~~~~~----~~~~~~~~~ 224 (229)
...+. ....+..++
T Consensus 338 ~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 338 QLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp EEECSSSSCEEEEEEEEE
T ss_pred eCCCCcccCccEEEEEEe
Confidence 55443 134555554
No 143
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.37 E-value=3.1e-13 Score=109.54 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCC-C--CCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNL-P--FFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~-~--~~~~~fD~V~~~ 155 (229)
.++.+|||||||+|..+..+++. +...|+|+|+++. .+.++.+|+.++ + +++++||.|+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 46789999999999999999987 5568999999976 345888898773 3 678999999987
Q ss_pred cchhhh---------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc-CceeEe
Q 027039 156 HLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT-SRFVDA 207 (229)
Q Consensus 156 ~~~~~~---------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~-~~~~~~ 207 (229)
...... ....+++++.++|||||.+++.+.. ..-.+.+.+.+.. ..+..+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~--~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW--EPYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHTSTTEEEC
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC--HHHHHHHHHHHHhCCCcccc
Confidence 321111 1136999999999999998877754 2223445555553 334433
No 144
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.37 E-value=2.5e-12 Score=112.36 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC------------------CeEEEcCCCCCCCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL------------------PLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~------------------~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.++.+|||+|||+|.++..++.. +..+|+|+|+++.+ +.+..+|+.+ ++++++||+|+++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCN 299 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEEC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEEC
Confidence 45689999999999999999988 45699999999762 3468889887 5667899999998
Q ss_pred cchhhh------CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeE
Q 027039 156 HLAEAL------FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVD 206 (229)
Q Consensus 156 ~~~~~~------~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~ 206 (229)
...++. ...++++++.+.|||||.++++......+ ...+.+.|+.++.+.
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~-~~~l~~~fg~~~~~a 355 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDY-FHKLKKIFGNCTTIA 355 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCH-HHHHHHHHSCCEEEE
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCH-HHHHHHhcCCEEEEe
Confidence 443321 12578999999999999999887765544 345677788655443
No 145
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=8.7e-13 Score=105.40 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=73.7
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
..+++.+|||+|||+|..+..+++.+ .+|+++|+++. .+.++.+|..+.+.++++||+|+++..
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 45789999999999999999999985 59999999875 356888998886666789999999866
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.++.. .++.+.|||||++++.+..
T Consensus 153 ~~~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCC-----THHHHTEEEEEEEEEEECS
T ss_pred hhhhh-----HHHHHhcccCcEEEEEEcC
Confidence 66553 2588999999999988775
No 146
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.37 E-value=1.8e-12 Score=109.39 Aligned_cols=113 Identities=10% Similarity=0.012 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCeE--------E---EcCCCCCC---CCCCceeEEEcccchhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLV--------S---RADPHNLP---FFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~~--------~---~~d~~~~~---~~~~~fD~V~~~~~~~~ 160 (229)
.++.+|||||||+|.++..+++.|..+|+|+|+++.|+.. . ..++..++ ++..+||+|++....+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~- 162 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI- 162 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS-
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh-
Confidence 4678999999999999999999987899999999998763 1 12333332 3344699999864433
Q ss_pred hCHHHHHHHHHhccccCcEEEEEeec----C-------Cc--------ccHHHHHHHHhcCceeEeee
Q 027039 161 LFPSRFVGEMERTVKIGGVCMVLMEE----C-------AG--------REIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 161 ~~~~~~l~~~~~~LkpgG~lil~~~~----~-------~~--------~~~~~l~~l~~~~~~~~~~~ 209 (229)
+...++.++.++|||||.+++++.. . +. +...++.+.+...+|....-
T Consensus 163 -sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 163 -SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp -CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred -hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3578999999999999999987322 0 00 13455677777788764443
No 147
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.37 E-value=1.6e-12 Score=106.94 Aligned_cols=115 Identities=16% Similarity=0.211 Sum_probs=89.7
Q ss_pred HhcccCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCcee
Q 027039 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFD 150 (229)
Q Consensus 89 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD 150 (229)
.....++++.+|||+|||+|..+..++.. + ..+++++|+++. .+.++++|+.+. +++++||
T Consensus 86 ~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D 164 (255)
T 3mb5_A 86 VAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVD 164 (255)
T ss_dssp HHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEE
T ss_pred HHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcC
Confidence 33345688999999999999999999987 3 569999999965 266888888854 6678999
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc--eeEeeee
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR--FVDAANV 210 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~--~~~~~~~ 210 (229)
+|+++. .++.++++++.+.|||||.+++.... .....++.+.++..+ |..++.+
T Consensus 165 ~v~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 165 HVILDL----PQPERVVEHAAKALKPGGFFVAYTPC--SNQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp EEEECS----SCGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHTGGGBSCCEEE
T ss_pred EEEECC----CCHHHHHHHHHHHcCCCCEEEEEECC--HHHHHHHHHHHHHcCCCccccEEE
Confidence 999841 25678999999999999998876654 445667777777777 6555543
No 148
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.37 E-value=4.5e-13 Score=104.27 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=74.4
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCC-CCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHN-LPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~-~~~~~~~fD~V~~~~ 156 (229)
..++.+|||+|||+|..+..+++.+..+|+|+|+++. .+.++.+|+.+ ++..+++||+|+++.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 3578899999999999999999887679999999975 24577888776 344456799999985
Q ss_pred chhhhCHHHHHHHHH--hccccCcEEEEEeecCC
Q 027039 157 LAEALFPSRFVGEME--RTVKIGGVCMVLMEECA 188 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~--~~LkpgG~lil~~~~~~ 188 (229)
..+.....++++.+. ++|||||.+++......
T Consensus 109 ~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 109 PYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 443334566777776 99999999998777643
No 149
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.36 E-value=2.8e-12 Score=110.91 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=75.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
...++.+|||||||+|.++..+++.|..+|+|+|+++. .+.++.+|+.+++++ ++||+|++..+
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 125 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCC
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCc
Confidence 44688999999999999999999987779999999962 356899999998765 68999999866
Q ss_pred hhhh---CHHHHHHHHHhccccCcEEEEEe
Q 027039 158 AEAL---FPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 158 ~~~~---~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.++. ...+.+.++.+.|||||.+++..
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 5554 34678889999999999987543
No 150
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=5.6e-12 Score=103.29 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-----CCCeEEEecCCCCC----------CeEEEcCCCCC---CCCC-CceeEEEccc
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-----GVADVTGVELMDSL----------PLVSRADPHNL---PFFD-EAFDVAFTAH 156 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-----g~~~v~~vD~s~~~----------~~~~~~d~~~~---~~~~-~~fD~V~~~~ 156 (229)
++.+|||||||+|..+..+++. +.++|+|+|+++.+ +.++++|+.+. +..+ .+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 5679999999999999999875 34699999999875 55889999884 5433 4799999864
Q ss_pred chhhhCHHHHHHHHHh-ccccCcEEEEEee--cCCcccHHHHHHHHhcC
Q 027039 157 LAEALFPSRFVGEMER-TVKIGGVCMVLME--ECAGREIKQIVELFRTS 202 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~-~LkpgG~lil~~~--~~~~~~~~~l~~l~~~~ 202 (229)
. |.+..+++.++.+ +|||||++++... ....+....+.+.++..
T Consensus 161 ~--~~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 161 A--HANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp S--CSSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred c--hHhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 3 3477889999997 9999999885321 11122334677777765
No 151
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.35 E-value=1.2e-11 Score=106.79 Aligned_cols=118 Identities=11% Similarity=0.059 Sum_probs=92.2
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------CCeEEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------LPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
++++.+|||||||+|..+..+++. +..+++++|+ +. .+.++.+|+.+ +++ .||+|++.++.++. +
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFT-SIP--NADAVLLKYILHNWTD 261 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTT-CCC--CCSEEEEESCGGGSCH
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccC-CCC--CccEEEeehhhccCCH
Confidence 467789999999999999999987 5569999998 54 25688899876 554 39999999988888 5
Q ss_pred HH--HHHHHHHhcccc---CcEEEEEeecC-------------------------CcccHHHHHHHHhcCceeEeeeeee
Q 027039 163 PS--RFVGEMERTVKI---GGVCMVLMEEC-------------------------AGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 163 ~~--~~l~~~~~~Lkp---gG~lil~~~~~-------------------------~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+. ++++++.++||| ||++++.-... ...+..++.++++..+|..++....
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~ 341 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISPL 341 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEec
Confidence 55 899999999999 99988763221 1134567788888888887776665
Q ss_pred cCC
Q 027039 213 NGS 215 (229)
Q Consensus 213 ~~~ 215 (229)
.|.
T Consensus 342 ~~~ 344 (352)
T 1fp2_A 342 TGF 344 (352)
T ss_dssp ETT
T ss_pred CCC
Confidence 554
No 152
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.35 E-value=2.6e-12 Score=110.29 Aligned_cols=87 Identities=17% Similarity=0.192 Sum_probs=73.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
.++.+|||||||+|.++..+++.|..+|+|+|+++. .+.++++|+.++++++++||+|++..+.+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 578899999999999999999988779999999942 25689999999988878999999974333
Q ss_pred h---h-CHHHHHHHHHhccccCcEEE
Q 027039 160 A---L-FPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 160 ~---~-~~~~~l~~~~~~LkpgG~li 181 (229)
. . .+..++.++.++|||||.++
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 2 2 57889999999999999986
No 153
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.34 E-value=1.5e-12 Score=102.85 Aligned_cols=118 Identities=8% Similarity=-0.002 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCCCe--------------EEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL--------------VSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~~~--------------~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
.+..+|||+|||+|.++..++.. +..+|+|+|+++.+++ +...|.... .+.++||+|++..+.|
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHH
Confidence 78999999999999999999887 5559999999988443 444555443 3568999999999999
Q ss_pred hh-CHHHHHHHHHhccccCcEEEEEeecCC--------cccHHHHHHHHhcCceeEeeeeeecC
Q 027039 160 AL-FPSRFVGEMERTVKIGGVCMVLMEECA--------GREIKQIVELFRTSRFVDAANVTVNG 214 (229)
Q Consensus 160 ~~-~~~~~l~~~~~~LkpgG~lil~~~~~~--------~~~~~~l~~l~~~~~~~~~~~~~~~~ 214 (229)
++ +....+.++.+.|||||.++ ..+.+. .....+.-+.+-..+...+..++..+
T Consensus 127 lL~~~~~al~~v~~~L~pggvfI-Sfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~n 189 (200)
T 3fzg_A 127 VLKQQDVNILDFLQLFHTQNFVI-SFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGN 189 (200)
T ss_dssp HHHHTTCCHHHHHHTCEEEEEEE-EEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEETT
T ss_pred hhhhhHHHHHHHHHHhCCCCEEE-EeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeCc
Confidence 88 44567779999999999977 666211 22333444444466666666665543
No 154
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.34 E-value=8.7e-13 Score=103.09 Aligned_cols=94 Identities=14% Similarity=0.055 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCC----CCCCCceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNL----PFFDEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~----~~~~~~fD~V~~ 154 (229)
.++.+|||+|||+|..+..++..+..+|+|+|+++. .+.++++|+.+. ++++++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 578899999999999999988887679999999975 256888888763 223679999999
Q ss_pred ccchhhhCHHHHHHHH--HhccccCcEEEEEeecCC
Q 027039 155 AHLAEALFPSRFVGEM--ERTVKIGGVCMVLMEECA 188 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~--~~~LkpgG~lil~~~~~~ 188 (229)
+...+.....+.++.+ .++|||||.+++......
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 123 DPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp CCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 8654433667777777 889999999998777643
No 155
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=6e-12 Score=104.90 Aligned_cols=112 Identities=21% Similarity=0.266 Sum_probs=86.2
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC------------------CCeEEEcCCCCCCCCCCcee
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS------------------LPLVSRADPHNLPFFDEAFD 150 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~------------------~~~~~~~d~~~~~~~~~~fD 150 (229)
...+.++.+|||+|||+|.++..++.. +..+++++|+++. .+.++++|+.+.++++++||
T Consensus 94 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D 173 (280)
T 1i9g_A 94 EGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVD 173 (280)
T ss_dssp HTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEE
T ss_pred HcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCcee
Confidence 335688999999999999999999985 3569999999854 35688889888887788999
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc-CceeEee
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT-SRFVDAA 208 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~-~~~~~~~ 208 (229)
+|+++. .++.++++++.++|||||.+++.+.. .....++.+.++. .+|..++
T Consensus 174 ~v~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 174 RAVLDM----LAPWEVLDAVSRLLVAGGVLMVYVAT--VTQLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp EEEEES----SCGGGGHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHHSSBCCCE
T ss_pred EEEECC----cCHHHHHHHHHHhCCCCCEEEEEeCC--HHHHHHHHHHHHhcCCcCCcE
Confidence 999832 25778999999999999998877765 3344555555554 5554443
No 156
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.33 E-value=2.2e-12 Score=105.60 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCeE--------EE-----------cCCCCCCCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPLV--------SR-----------ADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~~--------~~-----------~d~~~~~~~~~~fD~V~~~ 155 (229)
.++.+|||||||+|.++..+++.|..+|+|+|+++.+++. .. .+....++...+||+++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 4577999999999999999999976799999999997652 11 1111111223456665553
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeec---CC----------------cccHHHHHHHHhcCceeEee
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEE---CA----------------GREIKQIVELFRTSRFVDAA 208 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~---~~----------------~~~~~~l~~l~~~~~~~~~~ 208 (229)
...++.++.++|||||.+++.+.. .. ..+..++.+++...+|..+.
T Consensus 116 -------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 116 -------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp -------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred -------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 267899999999999999986421 00 01345677778877776443
No 157
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.32 E-value=9.2e-12 Score=104.27 Aligned_cols=92 Identities=16% Similarity=0.036 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCC---ChhhHHHHhC-CCCeEEEecCCCC-------------CCeEEEcCCCCCC-----------CCCC
Q 027039 96 NHSKVLCVSAGA---GHEVMAFNSI-GVADVTGVELMDS-------------LPLVSRADPHNLP-----------FFDE 147 (229)
Q Consensus 96 ~~~~vLDiG~G~---G~~~~~l~~~-g~~~v~~vD~s~~-------------~~~~~~~d~~~~~-----------~~~~ 147 (229)
...+|||||||+ |..+..+... +..+|+++|+++. .+.++++|+.+.+ ++.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 9887766654 4469999999976 3458999987631 2335
Q ss_pred ceeEEEcccchhhh-C--HHHHHHHHHhccccCcEEEEEeecC
Q 027039 148 AFDVAFTAHLAEAL-F--PSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 148 ~fD~V~~~~~~~~~-~--~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
+||+|+++.+.+++ + +.++++++.++|||||.+++.....
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 89999999888887 4 7999999999999999999776554
No 158
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.32 E-value=1.7e-12 Score=103.76 Aligned_cols=91 Identities=15% Similarity=0.045 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCC-CCCCCCceeEEEcccchh
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHN-LPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~-~~~~~~~fD~V~~~~~~~ 159 (229)
++.+|||+|||+|..+..++..+..+|+|+|+++. .+.++++|+.+ ++..+++||+|+++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 67899999999999999988887669999999976 24588888876 566678999999975433
Q ss_pred hhCHHHHHHHHHh--ccccCcEEEEEeec
Q 027039 160 ALFPSRFVGEMER--TVKIGGVCMVLMEE 186 (229)
Q Consensus 160 ~~~~~~~l~~~~~--~LkpgG~lil~~~~ 186 (229)
.....++++++.+ +|||||.+++....
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 3366778888865 59999999877765
No 159
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.32 E-value=9.5e-12 Score=104.41 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=84.2
Q ss_pred cccCchhHHhhhhhHHHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecC-CCCC--------------
Q 027039 67 RLWSSKSWKQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVEL-MDSL-------------- 131 (229)
Q Consensus 67 ~~~~~~~w~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~-s~~~-------------- 131 (229)
.+|....|.... .+...+.......++.+|||+|||+|..+..++..|..+|+|+|+ ++.+
T Consensus 54 ~~~g~~~~~~~~----~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~ 129 (281)
T 3bzb_A 54 PLWTSHVWSGAR----ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTAN 129 (281)
T ss_dssp --------CHHH----HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC-
T ss_pred CCCCceeecHHH----HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhh
Confidence 466666663322 222222222233578899999999999999999887669999999 6542
Q ss_pred -----------CeEEEcCCCCCC--C----CCCceeEEEcccchhhh-CHHHHHHHHHhccc---c--CcEEEEEeecCC
Q 027039 132 -----------PLVSRADPHNLP--F----FDEAFDVAFTAHLAEAL-FPSRFVGEMERTVK---I--GGVCMVLMEECA 188 (229)
Q Consensus 132 -----------~~~~~~d~~~~~--~----~~~~fD~V~~~~~~~~~-~~~~~l~~~~~~Lk---p--gG~lil~~~~~~ 188 (229)
+.+...+..+.. + .+++||+|++..+.++. +...+++.+.++|| | ||.++++.....
T Consensus 130 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 130 SCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp ---------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred hcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 223333332211 1 35789999997766666 78899999999999 9 999887665533
Q ss_pred c---ccHHHHHHHHhcCc-eeE
Q 027039 189 G---REIKQIVELFRTSR-FVD 206 (229)
Q Consensus 189 ~---~~~~~l~~l~~~~~-~~~ 206 (229)
. +....+.+.++..+ |..
T Consensus 210 ~~~~~~~~~~~~~l~~~G~f~v 231 (281)
T 3bzb_A 210 PHLAERDLAFFRLVNADGALIA 231 (281)
T ss_dssp ------CTHHHHHHHHSTTEEE
T ss_pred cccchhHHHHHHHHHhcCCEEE
Confidence 2 22345666667666 443
No 160
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.32 E-value=1.4e-12 Score=104.11 Aligned_cols=92 Identities=20% Similarity=0.111 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCCCC--CCCCc-eeEEEcc
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHNLP--FFDEA-FDVAFTA 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~--~~~~~-fD~V~~~ 155 (229)
++.+|||+|||+|.++..++..+..+|+|+|+++. .++++++|+.+.. +.+++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 67899999999999999988887679999999965 2457788877643 23678 9999997
Q ss_pred cchhhhCHHHHHHHH--HhccccCcEEEEEeecC
Q 027039 156 HLAEALFPSRFVGEM--ERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~--~~~LkpgG~lil~~~~~ 187 (229)
...+.....++++++ .++|||||.+++.....
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 553322567788888 67899999998777653
No 161
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.31 E-value=3.6e-12 Score=103.26 Aligned_cols=88 Identities=19% Similarity=0.142 Sum_probs=72.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
...++.+|||||||+|..+..+++.+ .+|+|+|+++. .+.++.+|+.+....+++||+|+++...+
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAP 145 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHH
Confidence 45788999999999999999999987 59999999875 35688888877333467999999987666
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.. .++.+.|||||.+++.+..
T Consensus 146 ~~~-----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 146 TLL-----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCC-----HHHHHTEEEEEEEEEEECS
T ss_pred HHH-----HHHHHHcCCCcEEEEEEcC
Confidence 553 3688999999999988765
No 162
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.31 E-value=3.5e-12 Score=107.38 Aligned_cols=121 Identities=13% Similarity=0.196 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCce---eEEEcc-
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAF---DVAFTA- 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~f---D~V~~~- 155 (229)
++.+|||+|||+|..+..++..+..+|+|+|+|+. .+.++++|+.+. ++ ++| |+|++|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcC
Confidence 66799999999999999998874459999999976 166889998873 22 578 999998
Q ss_pred -cchhh--------hC----------HHHHHHHHH-hccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCC
Q 027039 156 -HLAEA--------LF----------PSRFVGEME-RTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGS 215 (229)
Q Consensus 156 -~~~~~--------~~----------~~~~l~~~~-~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 215 (229)
++... .. ...+++++. +.+||||.+++.++. .....+.+++... ..+.....
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~---~q~~~v~~~~~~~-----~~~~D~~g 272 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE---DQVEELKKIVSDT-----VFLKDSAG 272 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT---TCHHHHTTTSTTC-----EEEECTTS
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc---hHHHHHHHHHHhC-----CeecccCC
Confidence 11100 01 237899999 999999998876554 4456677777765 33344455
Q ss_pred eeEEEEEEecc
Q 027039 216 NMTRILMRRTR 226 (229)
Q Consensus 216 ~~~~~~~~~~~ 226 (229)
..|.++.++++
T Consensus 273 ~~R~~~~~~k~ 283 (284)
T 1nv8_A 273 KYRFLLLNRRS 283 (284)
T ss_dssp SEEEEEEECCC
T ss_pred CceEEEEEEcc
Confidence 55777766655
No 163
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.31 E-value=4.8e-12 Score=109.52 Aligned_cols=117 Identities=17% Similarity=0.090 Sum_probs=87.8
Q ss_pred hcccCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEE
Q 027039 90 GKSLLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVA 152 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V 152 (229)
.....+++.+|||+|||+|.++..++.. +..+++|+|+++. .+.++++|+.+++.+.+.||+|
T Consensus 197 ~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~I 276 (354)
T 3tma_A 197 RLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRI 276 (354)
T ss_dssp HHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEE
T ss_pred HHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEE
Confidence 3345678899999999999999999986 3459999999976 3679999999988777889999
Q ss_pred Ecccch--------hhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee
Q 027039 153 FTAHLA--------EAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 153 ~~~~~~--------~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+++--. +.. ...++++++.++|||||.+++.+.. ...+.++.+ .++...+....
T Consensus 277 i~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~-----~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 277 LANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR-----PALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp EECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC-----HHHHHHHCC-TTEEEEEEEEC
T ss_pred EECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC-----HHHHHHHhh-cCcEEEEEEEE
Confidence 997211 111 2377899999999999999988764 122334444 66666555544
No 164
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.31 E-value=1.7e-13 Score=111.93 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
.++.+|||+|||+|..+..++..+ .+|+|+|+++. .+.++++|+.+++ ++++||+|+++...
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 478999999999999999999997 59999999975 3568899988876 56899999998666
Q ss_pred hhh-CHHHHHHHHHhccccCcEEEEEeec----------CCcccHHHHHHHHhcCceeEeeeeeecCCe
Q 027039 159 EAL-FPSRFVGEMERTVKIGGVCMVLMEE----------CAGREIKQIVELFRTSRFVDAANVTVNGSN 216 (229)
Q Consensus 159 ~~~-~~~~~l~~~~~~LkpgG~lil~~~~----------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 216 (229)
++. ++...+.++.++|||||.+++.... .......++..+++..+...+..+...+..
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~~~~ 223 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNNKL 223 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEETTEE
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEehhhcCcc
Confidence 655 4555777899999999985533211 123356778888887777777777666654
No 165
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.31 E-value=1.4e-11 Score=104.68 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=68.5
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecC----CCC-------------CCeEEEc-CCCCCCCCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVEL----MDS-------------LPLVSRA-DPHNLPFFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~----s~~-------------~~~~~~~-d~~~~~~~~~~fD~V~ 153 (229)
..++++.+|||+|||+|.++..+++. ++|+|+|+ ++. .+.++++ |+.+++ +++||+|+
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~ 153 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLL 153 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEE
Confidence 45688999999999999999999998 48999998 332 1346777 777765 56899999
Q ss_pred cccch---hhh-CHH---HHHHHHHhccccCcEEEEEeec
Q 027039 154 TAHLA---EAL-FPS---RFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~~~---~~~-~~~---~~l~~~~~~LkpgG~lil~~~~ 186 (229)
|+... ++. +.. .++.++.++|||||.+++-+..
T Consensus 154 sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 154 CDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp ECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred ECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 96332 111 222 5788999999999988865543
No 166
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=1.5e-11 Score=100.48 Aligned_cols=111 Identities=15% Similarity=0.219 Sum_probs=86.0
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
..+.++.+|||+|||+|..+..+++. ..+++++|+++. .+.+..+|+.+..+++++||+|+++
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD 165 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC
Confidence 34578999999999999999999988 459999999875 3457788888754356789999984
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
. .++.++++++.+.|||||.+++.... .....++.+.++.. |..++.+
T Consensus 166 ~----~~~~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~-f~~~~~~ 213 (248)
T 2yvl_A 166 V----REPWHYLEKVHKSLMEGAPVGFLLPT--ANQVIKLLESIENY-FGNLEVV 213 (248)
T ss_dssp S----SCGGGGHHHHHHHBCTTCEEEEEESS--HHHHHHHHHHSTTT-EEEEEEE
T ss_pred C----cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHhh-CCcceEE
Confidence 1 15678899999999999999887765 34556677777665 6655443
No 167
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.31 E-value=9.5e-12 Score=116.80 Aligned_cols=91 Identities=10% Similarity=0.083 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCC--CCeEEEecCCCC---------------------CCeEEEcCCCCCCCCCCceeE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDS---------------------LPLVSRADPHNLPFFDEAFDV 151 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g--~~~v~~vD~s~~---------------------~~~~~~~d~~~~~~~~~~fD~ 151 (229)
.++.+|||||||+|.++..+++.+ ..+|+|+|+++. .+.++++|+.++++.+++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 478999999999999999999985 259999999975 145899999999998999999
Q ss_pred EEcccchhhhC-HH--HHHHHHHhccccCcEEEEEeec
Q 027039 152 AFTAHLAEALF-PS--RFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~~~~~-~~--~~l~~~~~~LkpgG~lil~~~~ 186 (229)
|++..+.+|+. +. .+++++.++|||| .+++.+..
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999984 33 5899999999999 76666643
No 168
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.30 E-value=1.8e-11 Score=100.59 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCCC----------------CeEEEcCCCCC-CCC-----CCcee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-PFF-----DEAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~~~-----~~~fD 150 (229)
.++.+|||||||+|..+..+++. + .++|+++|+++.+ +.++++|+.+. +.. +++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 46789999999999999999986 3 5699999999873 34778887653 211 47999
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|++... ......+++++.++|||||.+++-
T Consensus 139 ~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 139 FIFIDAD--KTNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEESC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCC--hHHhHHHHHHHHHhcCCCeEEEEE
Confidence 9998643 225677899999999999998763
No 169
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.30 E-value=5.4e-12 Score=105.39 Aligned_cols=113 Identities=12% Similarity=0.156 Sum_probs=88.3
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~ 153 (229)
..+.++.+|||+|||+|..+..++.. + ..+++++|+++. .+.++.+|+.+. +++++||+|+
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~ 186 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALF 186 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEE
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEE
Confidence 35678999999999999999999887 4 569999999875 245778888775 5667999999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeee
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
++. .++.++++++.+.|||||.+++.... .....++.+.++..+|..++.+.
T Consensus 187 ~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~--~~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 187 LDV----PDPWNYIDKCWEALKGGGRFATVCPT--TNQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp ECC----SCGGGTHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHHSSEEEEEEEC
T ss_pred ECC----cCHHHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHHCCCceeEEEE
Confidence 842 24678999999999999998877654 33556677777777777665543
No 170
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.30 E-value=2.8e-11 Score=102.11 Aligned_cols=114 Identities=14% Similarity=0.117 Sum_probs=83.5
Q ss_pred ccCCCCCeEEEEcCCC------ChhhHHHHhC-C-CCeEEEecCCCC--CCeE-EEcCCCCCCCCCCceeEEEcccchh-
Q 027039 92 SLLFNHSKVLCVSAGA------GHEVMAFNSI-G-VADVTGVELMDS--LPLV-SRADPHNLPFFDEAFDVAFTAHLAE- 159 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~------G~~~~~l~~~-g-~~~v~~vD~s~~--~~~~-~~~d~~~~~~~~~~fD~V~~~~~~~- 159 (229)
..++++.+|||+|||+ |. ..+++. + .++|+|+|+++. .+.+ +++|+.+.+++ ++||+|+++....
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~ 135 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPR 135 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCccc
Confidence 4568899999999965 55 334443 4 469999999987 3568 99999988764 7899999962211
Q ss_pred -------h---h-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 160 -------A---L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 160 -------~---~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+ . ...++++++.++|||||.+++.+.... ...++.++++..+|..++.+
T Consensus 136 ~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~--~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 136 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS--WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--CCHHHHHHHTTEEEEEEEEE
T ss_pred cccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC--CHHHHHHHHHHcCCcEEEEE
Confidence 0 1 135789999999999999997664432 33578888888777766655
No 171
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.29 E-value=4.4e-11 Score=101.20 Aligned_cols=92 Identities=21% Similarity=0.212 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------------CCeEEEcCCCCC-CCCCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHNL-PFFDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------------~~~~~~~d~~~~-~~~~~~fD~V 152 (229)
.++.+|||||||+|..+..+++. +..+|+++|+++. .++++.+|+.+. +..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 46789999999999999999988 6679999999986 245778887763 3456899999
Q ss_pred Ecccchhhh-----CHHHHHHHHHhccccCcEEEEEeec
Q 027039 153 FTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 153 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++...... ...++++++.+.|||||.+++....
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 996432211 2278999999999999999877643
No 172
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=5.2e-12 Score=108.97 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC--------------CeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+ ..++.+|..+.+ +++||+|+++...+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFH 272 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcc
Confidence 45779999999999999999988 34599999999762 347778877643 67999999985444
Q ss_pred h-----h-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 160 A-----L-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 160 ~-----~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
+ . ...++++++.++|||||.++++......+ ...+.+.|+.+.
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~l~~~f~~~~ 321 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPY-PDVLDETFGFHE 321 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSH-HHHHHHHHSCCE
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCc-HHHHHHhcCceE
Confidence 2 2 46889999999999999999877664432 234556676553
No 173
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=1.8e-11 Score=105.01 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=75.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CC-CeEEEecCCCC--------------------------CCeEEEcCCCCC--
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GV-ADVTGVELMDS--------------------------LPLVSRADPHNL-- 142 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~-~~v~~vD~s~~--------------------------~~~~~~~d~~~~-- 142 (229)
.+.++.+|||+|||+|.++..++.. |. ++|+++|+++. .+.++++|+.+.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 4678999999999999999999987 43 69999999863 367889999886
Q ss_pred CCCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh
Q 027039 143 PFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (229)
Q Consensus 143 ~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~ 200 (229)
++++++||+|+++.. .+..++.++.++|||||.+++.... .....++.+.++
T Consensus 182 ~~~~~~fD~V~~~~~----~~~~~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~ 233 (336)
T 2b25_A 182 DIKSLTFDAVALDML----NPHVTLPVFYPHLKHGGVCAVYVVN--ITQVIELLDGIR 233 (336)
T ss_dssp ------EEEEEECSS----STTTTHHHHGGGEEEEEEEEEEESS--HHHHHHHHHHHH
T ss_pred ccCCCCeeEEEECCC----CHHHHHHHHHHhcCCCcEEEEEeCC--HHHHHHHHHHHH
Confidence 566778999998532 3555889999999999998866654 444555555544
No 174
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.28 E-value=5.1e-12 Score=105.90 Aligned_cols=91 Identities=13% Similarity=0.141 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCCh----hhHHHHhC-C----CCeEEEecCCCC------------------------------------
Q 027039 96 NHSKVLCVSAGAGH----EVMAFNSI-G----VADVTGVELMDS------------------------------------ 130 (229)
Q Consensus 96 ~~~~vLDiG~G~G~----~~~~l~~~-g----~~~v~~vD~s~~------------------------------------ 130 (229)
++.+|||+|||+|. .+..+++. | ..+|+|+|+|+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 46799999999998 44555554 3 238999999854
Q ss_pred ----------CCeEEEcCCCCCCCC-CCceeEEEcccchhhhCH---HHHHHHHHhccccCcEEEEEeec
Q 027039 131 ----------LPLVSRADPHNLPFF-DEAFDVAFTAHLAEALFP---SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 131 ----------~~~~~~~d~~~~~~~-~~~fD~V~~~~~~~~~~~---~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.+.|.++|+.+.|++ +++||+|+|.++..++++ .++++++++.|||||.+++-..+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 134677788776665 578999999988888854 68999999999999998764443
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.27 E-value=1.7e-11 Score=99.00 Aligned_cols=113 Identities=13% Similarity=0.196 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC----------------CCeEEEcCCCC-CCCCC-----Ccee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS----------------LPLVSRADPHN-LPFFD-----EAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~----------------~~~~~~~d~~~-~~~~~-----~~fD 150 (229)
.++.+|||||||+|..+..+++. +.++|+++|+++. .+.++++|+.+ ++... ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999985 3569999999986 25688888755 33222 7899
Q ss_pred EEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 151 VAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 151 ~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+|++....++. ...+++..+ ++|||||.+++. ........++.+.++.........+
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~--~~~~~~~~~~~~~l~~~~~~~~~~~ 194 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLAD--NVIVPGTPDFLAYVRGSSSFECTHY 194 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEES--CCCCCCCHHHHHHHHHCTTEEEEEE
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEe--CCCCcchHHHHHHHhhCCCceEEEc
Confidence 99998654444 456777777 999999996643 2223334556666654443433333
No 176
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.27 E-value=4.5e-12 Score=107.69 Aligned_cols=116 Identities=19% Similarity=0.218 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCCCCC--CCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHNLPF--FDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~~~~--~~~~fD~V 152 (229)
.++.+|||||||+|..+..+++. +..+|+++|+++. .+.++.+|+.+.+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56789999999999999999987 5679999999965 24577888776543 47899999
Q ss_pred Ecccchhhh-----CHHHHHHHHHhccccCcEEEEEeecC--CcccHHHHHHHHhcCceeEeeee
Q 027039 153 FTAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 153 ~~~~~~~~~-----~~~~~l~~~~~~LkpgG~lil~~~~~--~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
+++...... ...++++++.++|||||.+++..... .......+.+.++..+|..+...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEE
Confidence 997443321 11689999999999999998775542 22345667777776666555443
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.27 E-value=9.3e-12 Score=110.38 Aligned_cols=92 Identities=20% Similarity=0.142 Sum_probs=70.9
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC------------------------CeEEEcCCCCC--CC
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL------------------------PLVSRADPHNL--PF 144 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~------------------------~~~~~~d~~~~--~~ 144 (229)
..++++.+|||||||+|..+..++.. |..+|+|+|+++.+ +.++++|.... ++
T Consensus 238 l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~ 317 (433)
T 1u2z_A 238 CQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRV 317 (433)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHH
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccc
Confidence 35678999999999999999999997 77789999998752 33556654322 22
Q ss_pred --CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 145 --FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 145 --~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..++||+|+++......++.++++++.+.|||||++++.
T Consensus 318 ~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 318 AELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 247899999975543336678899999999999998754
No 178
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.26 E-value=6e-11 Score=102.64 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=93.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCC--------CCCeEEEcCCCCCCCCCCceeEEEcccchhhh-CHH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD--------SLPLVSRADPHNLPFFDEAFDVAFTAHLAEAL-FPS 164 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~--------~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~~~ 164 (229)
+++.+|||||||+|..+..+++. +..+++++|++. ..+.++.+|+.+ +++ .||+|+++++.++. ++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~ 268 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQ 268 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHH
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHH
Confidence 56789999999999999999987 556899999841 136688999987 665 49999999988877 555
Q ss_pred --HHHHHHHhcccc---CcEEEEEeec---C-----------------------CcccHHHHHHHHhcCceeEeeeeeec
Q 027039 165 --RFVGEMERTVKI---GGVCMVLMEE---C-----------------------AGREIKQIVELFRTSRFVDAANVTVN 213 (229)
Q Consensus 165 --~~l~~~~~~Lkp---gG~lil~~~~---~-----------------------~~~~~~~l~~l~~~~~~~~~~~~~~~ 213 (229)
++++++.++||| ||++++.-.. . ...+..++.+++++.+|..++.....
T Consensus 269 ~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 348 (358)
T 1zg3_A 269 SLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPIS 348 (358)
T ss_dssp HHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecC
Confidence 899999999999 9998875321 1 11255677888888888877766655
Q ss_pred CCeeEEEE
Q 027039 214 GSNMTRIL 221 (229)
Q Consensus 214 ~~~~~~~~ 221 (229)
+. ..++.
T Consensus 349 ~~-~~vie 355 (358)
T 1zg3_A 349 GF-KSLIE 355 (358)
T ss_dssp TT-EEEEE
T ss_pred CC-cEEEE
Confidence 54 24443
No 179
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=8.7e-12 Score=99.86 Aligned_cols=89 Identities=19% Similarity=0.104 Sum_probs=70.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCC--CCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g--~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
...++.+|||||||+|..+..+++.. ..+|+++|+++. .+.+..+|.......+++||+|+++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEEC
Confidence 45788999999999999999999873 259999999865 2557788875432236789999998
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
...++.. .++.+.|||||++++.+..
T Consensus 154 ~~~~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 154 AAGPKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SBBSSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred CchHHHH-----HHHHHHcCCCcEEEEEECC
Confidence 7666553 4789999999999988765
No 180
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.26 E-value=8.1e-12 Score=106.56 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=72.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.++++.+|||||||+|..+..+++. + .++|+|+|+++. .+.++.+|..+.+.++++||+|++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 4578999999999999999999987 3 257999999975 2568889988855556899999998
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
...++.. +++.+.|||||++++.+..
T Consensus 152 ~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 152 VGVDEVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SBBSCCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred CCHHHHH-----HHHHHhcCCCcEEEEEECC
Confidence 7666554 5788999999999877643
No 181
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.26 E-value=8.1e-11 Score=101.88 Aligned_cols=132 Identities=18% Similarity=0.123 Sum_probs=101.0
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCC--------------CCCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD--------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~--------------~~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
.++...+|+|||||+|..+..+++. +..+++..|..+ ..++++.+|+.+.|.+ .+|++++.++
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~v 253 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARV 253 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESS
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeee
Confidence 4567789999999999999999988 666888888632 1467999999876654 4799999988
Q ss_pred hhhh-CH--HHHHHHHHhccccCcEEEEEeec---C--------------------CcccHHHHHHHHhcCceeEeeeee
Q 027039 158 AEAL-FP--SRFVGEMERTVKIGGVCMVLMEE---C--------------------AGREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 158 ~~~~-~~--~~~l~~~~~~LkpgG~lil~~~~---~--------------------~~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
.|.. ++ .++++++++.|+|||+++++=.. . .+.+..++.+++.+.+|..++-..
T Consensus 254 lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 254 LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 8876 33 57899999999999998865321 1 123567788999999998777555
Q ss_pred ecCCeeEEEEEEeccC
Q 027039 212 VNGSNMTRILMRRTRL 227 (229)
Q Consensus 212 ~~~~~~~~~~~~~~~~ 227 (229)
. ++....|+.+|++.
T Consensus 334 ~-~~~~~~i~ArKgt~ 348 (353)
T 4a6d_A 334 T-GAIYDAILARKGTH 348 (353)
T ss_dssp C-SSSCEEEEEECCCC
T ss_pred c-CCceEEEEEEecCc
Confidence 4 44457788888764
No 182
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.25 E-value=4e-11 Score=98.75 Aligned_cols=87 Identities=11% Similarity=0.042 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCC-CCCC--CCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHN-LPFF--DEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~-~~~~--~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. + .++|+++|+++. .+.++.+|+.+ ++.. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 57889999999999999999987 4 569999999975 35688888866 3332 34999999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+... ......+++++.++|||||.+++.
T Consensus 142 ~d~~--~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 142 IDAD--KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp ECSC--GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred ECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 8542 224677999999999999987754
No 183
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.25 E-value=1.9e-11 Score=100.34 Aligned_cols=93 Identities=16% Similarity=0.245 Sum_probs=72.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-----------------------CCeEEEcCCCC-CC--CCC
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-----------------------LPLVSRADPHN-LP--FFD 146 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-----------------------~~~~~~~d~~~-~~--~~~ 146 (229)
++++.+|||||||+|.++..++.. +...++|+|+++. .+.++.+|+.+ ++ +++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 367889999999999999999988 4458999999853 35688999887 66 778
Q ss_pred CceeEEEcccchhhh---------CHHHHHHHHHhccccCcEEEEEeec
Q 027039 147 EAFDVAFTAHLAEAL---------FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~---------~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+++|.|+.+.-.... ...+++.++.++|||||.+++.++.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 899999865211110 0148999999999999999986654
No 184
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.24 E-value=2.5e-11 Score=105.91 Aligned_cols=86 Identities=20% Similarity=0.190 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcccch-
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAHLA- 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~- 158 (229)
.++.+|||||||+|.++...++.|..+|+|+|.++. .+.++++|++++.++ ++||+|++..+.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 468899999999999999888889889999999863 356999999998775 689999995322
Q ss_pred ---hhhCHHHHHHHHHhccccCcEEE
Q 027039 159 ---EALFPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 159 ---~~~~~~~~l~~~~~~LkpgG~li 181 (229)
+......++....+.|||||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 22256788888899999999865
No 185
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.23 E-value=6.4e-12 Score=115.38 Aligned_cols=92 Identities=12% Similarity=0.118 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------------CeEEEcCCCCC--CCCCCceeEEEcccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------------PLVSRADPHNL--PFFDEAFDVAFTAHL 157 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------------~~~~~~d~~~~--~~~~~~fD~V~~~~~ 157 (229)
..+.+|||||||.|.++..+++.|. +|+|+|+++.+ +++.+++++++ ++++++||+|+|..+
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5678999999999999999999997 99999999762 45888888886 466789999999999
Q ss_pred hhhh-CHHH--HHHHHHhccccCcEEEEEeecC
Q 027039 158 AEAL-FPSR--FVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 158 ~~~~-~~~~--~l~~~~~~LkpgG~lil~~~~~ 187 (229)
.+|+ ++.. .+..+.+.|+++|..++..-..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9998 6643 3456778899998777655443
No 186
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.23 E-value=2.5e-11 Score=109.24 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=74.3
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCC---------------CCCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD---------------SLPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~---------------~~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
...++.+|||||||+|.++..+++.|..+|+|+|+++ ..+.++++|+.+++++ ++||+|+++.+
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc
Confidence 3457889999999999999999988777999999986 1356899999987764 68999999876
Q ss_pred hhhh-C--HHHHHHHHHhccccCcEEEEEe
Q 027039 158 AEAL-F--PSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 158 ~~~~-~--~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.++. . ..+.+.++.+.|||||.+++..
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5655 2 3567778899999999987533
No 187
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.23 E-value=3e-12 Score=98.50 Aligned_cols=92 Identities=23% Similarity=0.169 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCC-C-C--CCCceeEEEccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNL-P-F--FDEAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~-~-~--~~~~fD~V~~~~ 156 (229)
+++.+|||+|||+|..+..+++.+. +++|+|+++. .++++++|+.+. + . .+++||+|+++.
T Consensus 40 ~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 40 PRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred cCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 4788999999999999999999976 5999999976 356778887662 2 1 134899999985
Q ss_pred chhhhCHHHHHHHHH--hccccCcEEEEEeecCC
Q 027039 157 LAEALFPSRFVGEME--RTVKIGGVCMVLMEECA 188 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~--~~LkpgG~lil~~~~~~ 188 (229)
..+ ....++++.+. ++|||||.+++.+....
T Consensus 119 ~~~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 119 PYA-MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CTT-SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CCc-hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 443 44456666666 99999999988777644
No 188
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.22 E-value=6.9e-12 Score=97.53 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=80.0
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCCCCeEEEcCCCCCCC---CCCceeEEEcccchhhh--CHHH
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLPLVSRADPHNLPF---FDEAFDVAFTAHLAEAL--FPSR 165 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~~~~~~~~d~~~~~~---~~~~fD~V~~~~~~~~~--~~~~ 165 (229)
.++++.+|||||||... ..+.+. .. +-+.....+.++++|+.++++ ++++||+|+++.+.++. ++.+
T Consensus 9 g~~~g~~vL~~~~g~v~--vD~s~~ml~~----a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~ 82 (176)
T 2ld4_A 9 GISAGQFVAVVWDKSSP--VEALKGLVDK----LQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE 82 (176)
T ss_dssp TCCTTSEEEEEECTTSC--HHHHHHHHHH----HHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHH
T ss_pred CCCCCCEEEEecCCcee--eeCCHHHHHH----HHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHH
Confidence 46899999999999742 111110 00 000001137789999999887 78999999998777766 7799
Q ss_pred HHHHHHhccccCcEEEEEeecCC-------cccHHHHHHHHhcCceeEeeeee
Q 027039 166 FVGEMERTVKIGGVCMVLMEECA-------GREIKQIVELFRTSRFVDAANVT 211 (229)
Q Consensus 166 ~l~~~~~~LkpgG~lil~~~~~~-------~~~~~~l~~l~~~~~~~~~~~~~ 211 (229)
++++++++|||||++++...... ..+..++.+.+...+|+.+.+..
T Consensus 83 ~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi~~~~~~ 135 (176)
T 2ld4_A 83 ILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQ 135 (176)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCcEeecCc
Confidence 99999999999999998544321 12467888999999996655543
No 189
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.21 E-value=1.1e-10 Score=95.07 Aligned_cols=128 Identities=9% Similarity=0.019 Sum_probs=91.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCC-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
+++++.+|||||||+|..+..++..+ ..+|+|+|+++. .+.+..+|..+...++++||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEe
Confidence 45788999999999999999999984 568999999987 2568899988865544579998865
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee--eecCCeeEEEEEEec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV--TVNGSNMTRILMRRT 225 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 225 (229)
.+.. .-..+++.+..+.|+++|++++.- . .....+.+.+...+|.-+.+- .-.|.-..++...++
T Consensus 98 GmGg-~lI~~IL~~~~~~l~~~~~lIlqp-~---~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 98 GMGG-RLIADILNNDIDKLQHVKTLVLQP-N---NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp EECH-HHHHHHHHHTGGGGTTCCEEEEEE-S---SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred CCch-HHHHHHHHHHHHHhCcCCEEEEEC-C---CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 4333 123567888889999999977443 2 235667777777777666653 445555556555554
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.21 E-value=2.2e-11 Score=99.16 Aligned_cols=88 Identities=22% Similarity=0.232 Sum_probs=69.5
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCC-CceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFD-EAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~-~~fD~V~~~ 155 (229)
.+.++.+|||||||+|..+..+++. + .+|+++|+++. .+.++.+|. ..++++ .+||+|+++
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~ 165 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVT 165 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEEC
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEEC
Confidence 4578899999999999999999988 5 69999999875 245778887 334444 359999998
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecC
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
...++.. .++.+.|||||++++.+...
T Consensus 166 ~~~~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 166 AGAPKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SBBSSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred CcHHHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 6655443 36889999999999888753
No 191
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.20 E-value=1.5e-10 Score=94.04 Aligned_cols=127 Identities=10% Similarity=0.054 Sum_probs=91.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCC-CCeEEEecCCCC----------------CCeEEEcCCCC-CCCCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDS----------------LPLVSRADPHN-LPFFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g-~~~v~~vD~s~~----------------~~~~~~~d~~~-~~~~~~~fD~V~~ 154 (229)
.++++.+|||||||+|..+..++..+ ..+|+|+|+++. .+.+..+|..+ ++. +.+||+|+.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEEE
Confidence 45788999999999999999999984 668999999987 25588888754 432 236999887
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee--eecCCeeEEEEEEec
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV--TVNGSNMTRILMRRT 225 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 225 (229)
..+... ...+++.+..+.|+|+|++++. +. .....+.+.+...+|.-+.+- .-.|.-..++...++
T Consensus 91 aG~Gg~-~i~~Il~~~~~~L~~~~~lVlq-~~---~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~ 158 (225)
T 3kr9_A 91 AGMGGR-LIARILEEGLGKLANVERLILQ-PN---NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAG 158 (225)
T ss_dssp EEECHH-HHHHHHHHTGGGCTTCCEEEEE-ES---SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEES
T ss_pred cCCChH-HHHHHHHHHHHHhCCCCEEEEE-CC---CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 544331 1467889999999999997753 32 245667777777777766653 445555555555544
No 192
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.20 E-value=2.4e-11 Score=98.97 Aligned_cols=86 Identities=19% Similarity=0.245 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCC-C-CCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNL-P-FFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~~~~~fD~V~~~ 155 (229)
.++.+|||||||+|..+..++.. +..+|+++|+++. .+.++.+|+.+. + ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 47889999999999999999986 4569999999975 356889998763 4 346899999985
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEE
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMV 182 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil 182 (229)
.. ......+++++.+.|||||.+++
T Consensus 150 ~~--~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 150 AA--KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TT--SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred Cc--HHHHHHHHHHHHHhcCCCeEEEE
Confidence 32 22567899999999999999875
No 193
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.20 E-value=1.7e-11 Score=99.45 Aligned_cols=86 Identities=9% Similarity=0.131 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC-----------------CCeEEEcCCCCC-C-CCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS-----------------LPLVSRADPHNL-P-FFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~-----------------~~~~~~~d~~~~-~-~~~~~fD~V~ 153 (229)
+++.+|||||||+|..+..+++. +.++|+++|+++. .+.++++|+.+. + +++++||+|+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 55 NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 34559999999999999999885 3569999999976 245778887663 2 3468999999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEE
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMV 182 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil 182 (229)
+... ..+...+++++.+.|||||.+++
T Consensus 135 ~d~~--~~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 135 GQVS--PMDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp ECCC--TTTHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCc--HHHHHHHHHHHHHHcCCCcEEEE
Confidence 8632 12467789999999999999775
No 194
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.20 E-value=3.9e-11 Score=102.35 Aligned_cols=112 Identities=9% Similarity=0.020 Sum_probs=80.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
..+++.+|||+|||+|..+..+++. +.++|+|+|+++. .+.++++|+.+++..+++||+|+++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 3478899999999999999999986 3469999999976 2458888988876556789999985
Q ss_pred cc------hhh-------h----------CHHHHHHHHHhccccCcEEEEEeecCC-cccHHHHHHHHhcCce
Q 027039 156 HL------AEA-------L----------FPSRFVGEMERTVKIGGVCMVLMEECA-GREIKQIVELFRTSRF 204 (229)
Q Consensus 156 ~~------~~~-------~----------~~~~~l~~~~~~LkpgG~lil~~~~~~-~~~~~~l~~l~~~~~~ 204 (229)
.- .+. . ...++++++.+.|||||++++.+-... .+....+..++++.++
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~ 267 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDV 267 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCC
Confidence 21 110 0 115889999999999999987664432 2233334555565554
No 195
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.19 E-value=1.5e-10 Score=100.89 Aligned_cols=124 Identities=15% Similarity=0.161 Sum_probs=91.5
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCC-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
..++.+|||+|||+|.++..++..+ .++++|+|+++. .+.++++|+.++++++++||+|++|-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 4789999999999999999999984 359999999976 35699999999998889999999972
Q ss_pred chh-------hh-C-HHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEe
Q 027039 157 LAE-------AL-F-PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 157 ~~~-------~~-~-~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
-.. .. . ..++++++.++| ||.+++++.. ...+.+.++..++...+......+.....+++.
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----~~~~~~~~~~~G~~~~~~~~~~nG~l~~~~~~~ 364 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----KKAIEEAIAENGFEIIHHRVIGHGGLMVHLYVV 364 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----HHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----HHHHHHHHHHcCCEEEEEEEEEcCCEEEEEEec
Confidence 211 11 1 267888899988 5555555542 355667888888887777655444444445444
No 196
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.19 E-value=2.2e-11 Score=100.17 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=69.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC---CCCeEEEecCCCC-----------C-----------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI---GVADVTGVELMDS-----------L----------------------------- 131 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~---g~~~v~~vD~s~~-----------~----------------------------- 131 (229)
.++.+|||+|||+|.++..++.. +..+|+|+|+++. .
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 46789999999999999999875 3358999999965 1
Q ss_pred ----Ce-------------EEEcCCCCCCC-----CCCceeEEEcccchhhh----------CHHHHHHHHHhccccCcE
Q 027039 132 ----PL-------------VSRADPHNLPF-----FDEAFDVAFTAHLAEAL----------FPSRFVGEMERTVKIGGV 179 (229)
Q Consensus 132 ----~~-------------~~~~d~~~~~~-----~~~~fD~V~~~~~~~~~----------~~~~~l~~~~~~LkpgG~ 179 (229)
+. ++++|+.+... .+++||+|+++...... ....+++++.++|||||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 34 88889877421 34589999998432221 246899999999999999
Q ss_pred EEEEeec
Q 027039 180 CMVLMEE 186 (229)
Q Consensus 180 lil~~~~ 186 (229)
+++ +..
T Consensus 210 l~~-~~~ 215 (250)
T 1o9g_A 210 IAV-TDR 215 (250)
T ss_dssp EEE-EES
T ss_pred EEE-eCc
Confidence 997 544
No 197
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.18 E-value=1.1e-10 Score=93.96 Aligned_cols=87 Identities=13% Similarity=0.014 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCC-C-CC---CCceeE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNL-P-FF---DEAFDV 151 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~~---~~~fD~ 151 (229)
.++.+|||||||+|..+..+++. + .++|+++|+++. .+.++++|+.+. + +. .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 57889999999999999999988 3 569999999975 256888887652 1 11 267999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|++... ......+++++.++|||||.+++.
T Consensus 137 v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 137 IFIDAD--KQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EEECSC--GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEcCC--cHHHHHHHHHHHHhcCCCcEEEEe
Confidence 998643 224678999999999999986653
No 198
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.18 E-value=5.7e-11 Score=95.89 Aligned_cols=88 Identities=18% Similarity=0.234 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC--------------------CCeEEEcCCCCCCCCCCceeE
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS--------------------LPLVSRADPHNLPFFDEAFDV 151 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~--------------------~~~~~~~d~~~~~~~~~~fD~ 151 (229)
++++.+|||+|||+|..+..+++. + ..+|+++|+++. .+.++.+|....+..+++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 578999999999999999999987 4 259999999865 245788888766555678999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
|++....++ +++++.+.|||||.+++.+..
T Consensus 155 i~~~~~~~~-----~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPV-----VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSS-----CCHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHH-----HHHHHHHhcCCCcEEEEEEec
Confidence 998765443 346789999999999987765
No 199
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.17 E-value=2.9e-11 Score=96.65 Aligned_cols=85 Identities=13% Similarity=0.152 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCCC----------------CeEEEcCCCCC-CCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHNL-PFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~~----------------~~~~~~d~~~~-~~~~~~fD~V~~~ 155 (229)
.++.+|||||||+|..+..+++. + .++|+++|+++.+ +.++++|+.+. +..++ ||+|++.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 46789999999999999999987 3 5699999999762 45888888653 54456 9999986
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEE
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMV 182 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil 182 (229)
. ...+...+++++.++|||||.+++
T Consensus 134 ~--~~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 134 C--DVFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp T--TTSCHHHHHHHHGGGEEEEEEEEE
T ss_pred C--ChhhhHHHHHHHHHhcCCCeEEEE
Confidence 3 123678899999999999999875
No 200
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.17 E-value=2.2e-11 Score=98.88 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------------CCeEEEcCCCCC-CCC--CCceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------------LPLVSRADPHNL-PFF--DEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------------~~~~~~~d~~~~-~~~--~~~fD~V~~ 154 (229)
.++.+|||+|||+|..+..+++. +..+|+++|+++. .+.++.+|+.+. +.. +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 47889999999999999999987 4569999999875 256788888763 432 578999998
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+.... +..++++++.+.|||||.+++.
T Consensus 133 ~~~~~--~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 133 DAAKG--QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EGGGS--CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCHH--HHHHHHHHHHHHcCCCeEEEEE
Confidence 65432 6788999999999999998864
No 201
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=1.4e-10 Score=95.25 Aligned_cols=128 Identities=7% Similarity=-0.007 Sum_probs=89.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCC-CCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIG-VADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g-~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.++++.+|||||||+|..+..++..+ ..+|+|+|+++. .+.+..+|..+...++.+||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEe
Confidence 45788999999999999999999984 568999999987 2568889988765444469998865
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeee--eeecCCeeEEEEEEec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAAN--VTVNGSNMTRILMRRT 225 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 225 (229)
.+.. .-..+++.+..+.|+++|++++.- .. ....+.+.+...+|.-+.+ +.-.+.-..++...++
T Consensus 98 gmGg-~lI~~IL~~~~~~L~~~~~lIlq~-~~---~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 98 GMGG-TLIRTILEEGAAKLAGVTKLILQP-NI---AAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp EECH-HHHHHHHHHTGGGGTTCCEEEEEE-SS---CHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCch-HHHHHHHHHHHHHhCCCCEEEEEc-CC---ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 4333 123567888899999999977443 32 3455666666555554443 3445555555554544
No 202
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.16 E-value=3e-11 Score=101.00 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCCC----CCCceeEE
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLPF----FDEAFDVA 152 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~----~~~~fD~V 152 (229)
.+++.+|||+|||+|..+..+++. +.++|+|+|+++. .+.++++|+.+++. .+++||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 468899999999999999999985 4479999999976 34577888877653 26789999
Q ss_pred Ecccch------------------hh-hCHHHHHHHHHhccccCcEEEEEeecCC-cccHHHHHHHHh
Q 027039 153 FTAHLA------------------EA-LFPSRFVGEMERTVKIGGVCMVLMEECA-GREIKQIVELFR 200 (229)
Q Consensus 153 ~~~~~~------------------~~-~~~~~~l~~~~~~LkpgG~lil~~~~~~-~~~~~~l~~l~~ 200 (229)
+++.-. .. ....++++++.+.|||||.+++.+.... .+....+..+.+
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~ 228 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQ 228 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHH
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHH
Confidence 987111 01 1357899999999999999887665432 223333444444
No 203
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.16 E-value=1.8e-10 Score=97.45 Aligned_cols=92 Identities=21% Similarity=0.208 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCC-CCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHN-LPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~V~ 153 (229)
..+.+|||||||+|..+..+++. +..+|+++|+++. .+.++.+|+.+ ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999988 6679999999865 24477777655 344467899999
Q ss_pred cccchhhh------CHHHHHHHHHhccccCcEEEEEeec
Q 027039 154 TAHLAEAL------FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~~~~~~------~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++...... ...++++++.+.|||||.+++.+..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 86332201 2278999999999999998876543
No 204
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.15 E-value=3.4e-11 Score=100.62 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=74.4
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.+.++.+|||+|||+|.++..++.. +.++|+|+|+++. .+.++.+|+.+.+. +++||+|+++.
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 3578999999999999999999988 5569999999975 34588999988743 67899999975
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.. ...+++.++.+.|||||.+++....
T Consensus 195 p~---~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 195 VH---KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp CS---SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cc---cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 43 4677899999999999998866554
No 205
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.15 E-value=6.1e-11 Score=99.43 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
.++|.+|||+|||+|.++..++..|..+|+++|+++. .+.++++|+.+++. .+.||.|+++..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 3899999999999999999999888779999999987 24588899988763 578999998744
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEEe--ecC--CcccHHHHHHHHhcC----ceeEeeeeeecCCeeE
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVLM--EEC--AGREIKQIVELFRTS----RFVDAANVTVNGSNMT 218 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~~--~~~--~~~~~~~l~~l~~~~----~~~~~~~~~~~~~~~~ 218 (229)
.. ..+++..+.+.|||||.+.+.. .+. .....+.+.+..+.. +...++.++.++....
T Consensus 202 ~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~~~ 267 (278)
T 3k6r_A 202 VR---THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp SS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTTEE
T ss_pred Cc---HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcEEEEEEEEEEeECcCcc
Confidence 33 3456777889999999876542 221 122344455554433 3445556666655433
No 206
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.15 E-value=6.6e-11 Score=95.79 Aligned_cols=88 Identities=17% Similarity=0.237 Sum_probs=70.5
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CC------CeEEEecCCCC--------------------CCeEEEcCCCCCCCC
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GV------ADVTGVELMDS--------------------LPLVSRADPHNLPFF 145 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~------~~v~~vD~s~~--------------------~~~~~~~d~~~~~~~ 145 (229)
.++++.+|||||||+|..+..+++. +. ++|+++|+++. .+.++.+|..+ +++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 3578899999999999999999886 42 59999999865 25578888876 444
Q ss_pred C-CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 146 D-EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 146 ~-~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+ ++||+|++....++. .+++.+.|||||++++.+..
T Consensus 160 ~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDT-----PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCSEEEEEECSCBSSC-----CHHHHHTEEEEEEEEEEESC
T ss_pred cCCCccEEEECCchHHH-----HHHHHHHhcCCCEEEEEEec
Confidence 4 789999998655543 36789999999999988765
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.15 E-value=8.1e-11 Score=101.19 Aligned_cols=105 Identities=15% Similarity=0.112 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-----------------CeEEEcCCCCCCC----CCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHNLPF----FDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-----------------~~~~~~d~~~~~~----~~~~fD~V~ 153 (229)
.++.+|||+|||+|.++..++..|. +|+++|+++.+ +.++++|+.+... .+++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 5678999999999999999999887 99999999761 5678888776421 156899999
Q ss_pred ccc----------chhhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh
Q 027039 154 TAH----------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (229)
Q Consensus 154 ~~~----------~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~ 200 (229)
++- +.... +..+++.++.++|||||.+++........+...+.++..
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~ 288 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMR 288 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHH
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHH
Confidence 951 11222 467899999999999999887776655444444444433
No 208
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.15 E-value=1.2e-10 Score=93.75 Aligned_cols=87 Identities=10% Similarity=0.116 Sum_probs=68.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCC-C-CC----CCcee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNL-P-FF----DEAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~~----~~~fD 150 (229)
.++.+|||||||+|..+..+++. + ..+|+++|+++. .+.++++|+.+. + +. .++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999987 3 569999999975 256888887552 2 11 17899
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|++... ......+++++.++|||||.+++.
T Consensus 143 ~v~~~~~--~~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 143 LIYIDAD--KANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHhcCCCcEEEEe
Confidence 9997542 225778999999999999998753
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.15 E-value=5.3e-11 Score=101.43 Aligned_cols=90 Identities=18% Similarity=0.181 Sum_probs=71.0
Q ss_pred CeEEEEcCCCChhhHHHHh-CCCCeEEEecCCCC---------------CCeEEEcCCCCC--CCCCCceeEEEcccch-
Q 027039 98 SKVLCVSAGAGHEVMAFNS-IGVADVTGVELMDS---------------LPLVSRADPHNL--PFFDEAFDVAFTAHLA- 158 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~-~g~~~v~~vD~s~~---------------~~~~~~~d~~~~--~~~~~~fD~V~~~~~~- 158 (229)
.+|||||||+|..+..+++ .+..+++++|+++. .+.++.+|+.+. .+++++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 4999999999999999998 44459999999976 245778887663 3456899999996322
Q ss_pred ----hhhCHHHHHHHHHhccccCcEEEEEeecC
Q 027039 159 ----EALFPSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 159 ----~~~~~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
.++...++++++.+.|||||.+++.....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 23344789999999999999998877643
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.14 E-value=3.3e-10 Score=98.74 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCC-CeEEEecCCCC---------------CCeEEEcCCCC-CCC-CCCceeEEEccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGV-ADVTGVELMDS---------------LPLVSRADPHN-LPF-FDEAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~-~~v~~vD~s~~---------------~~~~~~~d~~~-~~~-~~~~fD~V~~~~ 156 (229)
.++.+|||+| |+|.++..++..+. .+|+++|+++. .+.++++|+.+ +|. .+++||+|+++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 4678999999 99999999988743 69999999975 25689999988 664 457899999984
Q ss_pred chhhhCHHHHHHHHHhccccCcEE-EEEeecCCcccH---HHHHHHHh-cCce
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVC-MVLMEECAGREI---KQIVELFR-TSRF 204 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~l-il~~~~~~~~~~---~~l~~l~~-~~~~ 204 (229)
.........+++++.++|||||++ ++.+.. ...+. ..+.+.+. ..++
T Consensus 250 p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~ 301 (373)
T 2qm3_A 250 PETLEAIRAFVGRGIATLKGPRCAGYFGITR-RESSLDKWREIQKLLLNEFNV 301 (373)
T ss_dssp CSSHHHHHHHHHHHHHTBCSTTCEEEEEECT-TTCCHHHHHHHHHHHHHTSCC
T ss_pred CCchHHHHHHHHHHHHHcccCCeEEEEEEec-CcCCHHHHHHHHHHHHHhcCc
Confidence 332222578999999999999954 444432 12233 45566665 5544
No 211
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.14 E-value=1.4e-10 Score=97.07 Aligned_cols=92 Identities=20% Similarity=0.251 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCC-CCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHN-LPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. |..+|+++|+++. .++++.+|+.+ ++..+++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 45789999999999999999988 7779999999865 23477778765 333467999999
Q ss_pred cccchhh-----hCHHHHHHHHHhccccCcEEEEEeec
Q 027039 154 TAHLAEA-----LFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~~~~~-----~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++..... +...++++++.+.|||||.+++....
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9743321 12378999999999999998876543
No 212
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=8.8e-11 Score=94.81 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=71.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-C-----CCeEEEecCCCC--------------------CCeEEEcCCCCCC---
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-G-----VADVTGVELMDS--------------------LPLVSRADPHNLP--- 143 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g-----~~~v~~vD~s~~--------------------~~~~~~~d~~~~~--- 143 (229)
.++++.+|||||||+|..+..+++. + ..+|+++|+++. .+.++.+|..+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 3578899999999999999999887 3 259999999864 2568888888754
Q ss_pred -CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 144 -FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 144 -~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
..+++||+|++....++ +++++.+.|||||++++.+..
T Consensus 157 ~~~~~~fD~I~~~~~~~~-----~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASE-----LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSS-----CCHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHH-----HHHHHHHhcCCCcEEEEEEcc
Confidence 45678999999865543 347889999999999988875
No 213
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.11 E-value=8.8e-11 Score=98.03 Aligned_cols=108 Identities=9% Similarity=0.077 Sum_probs=75.5
Q ss_pred CCCeEEEEcCCC--ChhhHHHHhC--CCCeEEEecCCCCC---------------CeEEEcCCCCCC------CCCCcee
Q 027039 96 NHSKVLCVSAGA--GHEVMAFNSI--GVADVTGVELMDSL---------------PLVSRADPHNLP------FFDEAFD 150 (229)
Q Consensus 96 ~~~~vLDiG~G~--G~~~~~l~~~--g~~~v~~vD~s~~~---------------~~~~~~d~~~~~------~~~~~fD 150 (229)
...++||||||. +..+..+++. +..+|+++|.|+.+ +.++++|+.+.+ ...+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 346899999997 3344555443 55699999999862 458999998852 1124455
Q ss_pred -----EEEcccchhhh-C---HHHHHHHHHhccccCcEEEEEeecCCc--ccHHHHHHHHhcCc
Q 027039 151 -----VAFTAHLAEAL-F---PSRFVGEMERTVKIGGVCMVLMEECAG--REIKQIVELFRTSR 203 (229)
Q Consensus 151 -----~V~~~~~~~~~-~---~~~~l~~~~~~LkpgG~lil~~~~~~~--~~~~~l~~l~~~~~ 203 (229)
.|+++.+.|++ + |..+++++.+.|+|||.+++..-..+. ...+.+.+.++..+
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g 221 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARN 221 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcC
Confidence 57888888888 4 678999999999999999877655432 23444555555443
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.11 E-value=5.3e-10 Score=95.31 Aligned_cols=106 Identities=18% Similarity=0.191 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------------CCeEEEcCCCC-CCCCCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHN-LPFFDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------------~~~~~~~d~~~-~~~~~~~fD~V 152 (229)
.++.+|||||||+|..+..+++. +..+++++|+++. .+.++.+|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 46789999999999999999988 5679999999865 13467777765 33346899999
Q ss_pred Ecccchhh--------hCHHHHHHHHHhccccCcEEEEEeecCC---cccHHHHHHHHh
Q 027039 153 FTAHLAEA--------LFPSRFVGEMERTVKIGGVCMVLMEECA---GREIKQIVELFR 200 (229)
Q Consensus 153 ~~~~~~~~--------~~~~~~l~~~~~~LkpgG~lil~~~~~~---~~~~~~l~~l~~ 200 (229)
+++...+. +...++++++.+.|||||.+++...... ......+.+.++
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~ 214 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVR 214 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHH
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHH
Confidence 99744322 1247899999999999999987754321 233444444444
No 215
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.11 E-value=8.2e-10 Score=87.42 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------CCeEEEcCCCCCCCCCCceeEEEcccchhhhC-
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALF- 162 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~- 162 (229)
..++.+|||+|||+|.++..++..|..+|+|+|+++. .+.++++|+.+++ ++||+|+++...++..
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 3578899999999999999999887768999999976 3679999998865 6899999986555442
Q ss_pred --HHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 163 --PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 163 --~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
..++++++.+.+ |+ ++++... .....+.+.+...
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~~~~---~~~~~~~~~~~~~ 161 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSIGNA---KARDFLRREFSAR 161 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEEEEG---GGHHHHHHHHHHH
T ss_pred chhHHHHHHHHHhc--Cc-EEEEEcC---chHHHHHHHHHHC
Confidence 257888888888 44 4444432 2344555555544
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.10 E-value=3.9e-10 Score=96.50 Aligned_cols=92 Identities=22% Similarity=0.309 Sum_probs=70.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCC-CCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHN-LPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. +..+|+++|+++. .++++.+|+.+ ++..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 46789999999999999999988 6679999999865 23467777655 233357899999
Q ss_pred cccch-----hhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 154 TAHLA-----EALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~~~-----~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++... ..+...++++++.+.|||||.+++....
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 87421 1112378999999999999999876544
No 217
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.09 E-value=1.9e-09 Score=94.88 Aligned_cols=115 Identities=19% Similarity=0.147 Sum_probs=82.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCCCC------eEEEcCCCCCCCCCCceeEEEcc--cch------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSLP------LVSRADPHNLPFFDEAFDVAFTA--HLA------ 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~~~------~~~~~d~~~~~~~~~~fD~V~~~--~~~------ 158 (229)
.++.+|||+|||+|.++..+++. +..+++|+|+++.++ .++++|..+.+. +++||+|++| +..
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~ 116 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEASK 116 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTTEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCTTT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCCCcEEeCChhhcCc-cCCCCEEEECcCccCcccccc
Confidence 45679999999999999999875 446999999999864 477888887653 5789999997 110
Q ss_pred ------hhh----------------CHHHHHHHHHhccccCcEEEEEeecC--CcccHHHHHHHHhcCceeEeeee
Q 027039 159 ------EAL----------------FPSRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 159 ------~~~----------------~~~~~l~~~~~~LkpgG~lil~~~~~--~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
... ....+++.+.+.|||||.++++++.. .......+.+.+...+...+..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~~~i~~l 192 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYL 192 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSEEEEEEE
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCCeEEEEC
Confidence 100 01267899999999999999998763 12344566666554444444443
No 218
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.08 E-value=1.8e-09 Score=88.21 Aligned_cols=132 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred HhhhhhHHHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC--------------eEEEcCCC
Q 027039 75 KQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPH 140 (229)
Q Consensus 75 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~--------------~~~~~d~~ 140 (229)
+.+...+..++....+. .++.+|||||||.|.++..+. +...++|+|+++.++ .+.++|..
T Consensus 87 rerLp~ld~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~ 161 (253)
T 3frh_A 87 KERLAELDTLYDFIFSA---ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVL 161 (253)
T ss_dssp HHHGGGHHHHHHHHTSS---CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred HHHhhhHHHHHHHHhcC---CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 44455566666655443 678899999999999999988 566999999998843 37888888
Q ss_pred CCCCCCCceeEEEcccchhhh---CHHHHHHHHHhccccCcEEEEEeecCC--------cccHHHHHHHHhcCceeEeee
Q 027039 141 NLPFFDEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCMVLMEECA--------GREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 141 ~~~~~~~~fD~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~lil~~~~~~--------~~~~~~l~~l~~~~~~~~~~~ 209 (229)
..+.+ ++||+|++.-+.+++ .....+ ++.+.|+++|.++ .++.+. ....+..-+.+=..+...+..
T Consensus 162 ~~~~~-~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvV-sfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~ 238 (253)
T 3frh_A 162 CAPPA-EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAV-SFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDK 238 (253)
T ss_dssp TSCCC-CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEE-EEECC-----------CHHHHHHHHSCTTEEEEEE
T ss_pred cCCCC-CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEE-EcChHHhcCCCcchhhHHHHHHHHHhhccchhhhh
Confidence 87754 599999998666655 333344 8888999998866 666321 112223333333555555555
Q ss_pred eeecC
Q 027039 210 VTVNG 214 (229)
Q Consensus 210 ~~~~~ 214 (229)
++..+
T Consensus 239 ~~~~n 243 (253)
T 3frh_A 239 KTIGT 243 (253)
T ss_dssp EEETT
T ss_pred eecCc
Confidence 55543
No 219
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.07 E-value=3e-09 Score=87.34 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC----------------CeEEEcCCCCC---CCC---CCceeEE
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----------------PLVSRADPHNL---PFF---DEAFDVA 152 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~----------------~~~~~~d~~~~---~~~---~~~fD~V 152 (229)
++.+|||+|||+|..+..++.. +..+|+|+|+++.+ +.++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 6789999999999999998876 34599999999762 56889997762 444 3689999
Q ss_pred Ecccchhh-------h--------CH-HHHHHHHHh--------------------ccccCcEEEEEeecCCcccHHHHH
Q 027039 153 FTAHLAEA-------L--------FP-SRFVGEMER--------------------TVKIGGVCMVLMEECAGREIKQIV 196 (229)
Q Consensus 153 ~~~~~~~~-------~--------~~-~~~l~~~~~--------------------~LkpgG~lil~~~~~~~~~~~~l~ 196 (229)
+++..... . .+ ..++.++.+ .++++|.+...... .....++.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~ 222 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGK--KCSLAPLK 222 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESS--TTSHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCC--hhHHHHHH
Confidence 99811110 0 01 123334444 45555554433222 33446788
Q ss_pred HHHhcCceeEeeeeee-cCCeeEEEE
Q 027039 197 ELFRTSRFVDAANVTV-NGSNMTRIL 221 (229)
Q Consensus 197 ~l~~~~~~~~~~~~~~-~~~~~~~~~ 221 (229)
+++++.+|..++.... .|...+.++
T Consensus 223 ~~l~~~Gf~~v~~~~~~~g~~~~~~~ 248 (254)
T 2h00_A 223 EELRIQGVPKVTYTEFCQGRTMRWAL 248 (254)
T ss_dssp HHHHHTTCSEEEEEEEEETTEEEEEE
T ss_pred HHHHHcCCCceEEEEEecCCceEEEE
Confidence 8899888877665433 344444444
No 220
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.07 E-value=1.2e-10 Score=96.04 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCC-C-C-----CCCce
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNL-P-F-----FDEAF 149 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~-----~~~~f 149 (229)
.++.+|||||||+|..+..+++. + .++++++|+++. .+.++.+|+.+. + + ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 46789999999999999999886 3 569999999986 245788887653 3 1 15789
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+|++... ..+...+++++.++|||||.+++.
T Consensus 158 D~V~~d~~--~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 158 DFIFVDAD--KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp SEEEECSC--STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEEcCc--hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 99998643 225788999999999999998753
No 221
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.07 E-value=7.4e-10 Score=92.10 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-------------------CeEEEcCCCCCCCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------------PLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-------------------~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
..+.+|||||||+|..+..+++.+ .+|+++|+++.+ +.++.+|+.+.. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 456899999999999999988877 799999998652 335566665543 789999986
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
. .+|..+++++.+.|||||.+++....
T Consensus 147 ~----~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 Q----EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp S----CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C----CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2 24667999999999999998876544
No 222
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.06 E-value=8.4e-10 Score=97.90 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=78.0
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC--------------CeEEEcCCCCCC--CCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL--------------PLVSRADPHNLP--FFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~--------------~~~~~~d~~~~~--~~~~~fD~V~~~~ 156 (229)
.+++.+|||+|||+|..+..+++. +.++|+|+|+++.. +.++.+|+.+.+ +++++||+|+++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 478899999999999999999987 44699999999873 458888988876 5568999999741
Q ss_pred ------chhhh-C----------------HHHHHHHHHhccccCcEEEEEeecCC-cccHHHHHHHHh
Q 027039 157 ------LAEAL-F----------------PSRFVGEMERTVKIGGVCMVLMEECA-GREIKQIVELFR 200 (229)
Q Consensus 157 ------~~~~~-~----------------~~~~l~~~~~~LkpgG~lil~~~~~~-~~~~~~l~~l~~ 200 (229)
+.++. + ..+++.++.+.|||||++++.+.... .+....+..++.
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~ 391 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQ 391 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHH
Confidence 11111 1 14789999999999999887664322 223333444444
No 223
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.05 E-value=6e-10 Score=99.46 Aligned_cols=94 Identities=13% Similarity=0.086 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC---------------CCeEEEcCCCCCC--CCCCceeEEEc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS---------------LPLVSRADPHNLP--FFDEAFDVAFT 154 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~---------------~~~~~~~d~~~~~--~~~~~fD~V~~ 154 (229)
.+++.+|||+|||+|..+..+++. + .++|+++|+++. .+.++++|+.+.+ +++++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 478899999999999999999986 3 369999999976 3558888988876 55578999997
Q ss_pred c------cchhhh-C----------------HHHHHHHHHhccccCcEEEEEeecC
Q 027039 155 A------HLAEAL-F----------------PSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 155 ~------~~~~~~-~----------------~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
+ .+.+.. + ..+++.++.+.|||||.+++.+...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 4 111110 1 1578999999999999988766543
No 224
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=2.2e-10 Score=100.64 Aligned_cols=91 Identities=12% Similarity=-0.016 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC--------------eEEEcCCCCC-CCCCCceeEEEcccch-
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP--------------LVSRADPHNL-PFFDEAFDVAFTAHLA- 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~--------------~~~~~d~~~~-~~~~~~fD~V~~~~~~- 158 (229)
+++.+|||+|||+|.++..++..|. .|+++|+|+.++ .+.++|+.+. +..++.||+|+++.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 5699999999999999999999987 599999998732 3667787663 2223449999986211
Q ss_pred --------hhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 159 --------EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 --------~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
... ...+++..+.++|||||.+++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 111 3468899999999999998855544
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.04 E-value=3.1e-10 Score=92.42 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCC----CCCCC--Ccee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHN----LPFFD--EAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~----~~~~~--~~fD 150 (229)
.++.+|||||||+|..+..++.. + .++++++|+++. .+.++.+|+.+ ++..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46789999999999999999987 3 469999999976 24577888644 23333 7899
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|++... ..+...+++++.++|||||.+++.
T Consensus 151 ~V~~d~~--~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 151 LIFIDAD--KRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEECSC--GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 9998643 124678999999999999998764
No 226
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.04 E-value=8.7e-10 Score=92.49 Aligned_cols=91 Identities=19% Similarity=0.269 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-------------------------CeEEEcCCCCC-CCCCCc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------------------PLVSRADPHNL-PFFDEA 148 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-------------------------~~~~~~d~~~~-~~~~~~ 148 (229)
.++.+|||||||+|..+..+++.+..+++++|+++.+ +.++.+|+.+. +. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4678999999999999999998876799999998542 34566665442 22 578
Q ss_pred eeEEEcccchh-----hhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 149 FDVAFTAHLAE-----ALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 149 fD~V~~~~~~~-----~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
||+|+++.... ++...++++++.+.|||||.+++....
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99999974421 112378899999999999999877544
No 227
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.04 E-value=3.1e-10 Score=97.57 Aligned_cols=91 Identities=19% Similarity=0.260 Sum_probs=70.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCCC--CCCCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHNL--PFFDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~~--~~~~~~fD~V 152 (229)
.++.+|||||||+|..+..+++. +..+|+++|+++. .+.++.+|+.+. .+++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 56789999999999999999988 5679999999865 245778887653 2346799999
Q ss_pred Ecccch-----hhhCHHHHHHHHHhccccCcEEEEEee
Q 027039 153 FTAHLA-----EALFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 153 ~~~~~~-----~~~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+++... ..+...++++++.++|||||.+++...
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 986431 112247899999999999999886543
No 228
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.03 E-value=1.3e-09 Score=86.59 Aligned_cols=104 Identities=14% Similarity=0.050 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------------CCeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------------LPLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
..++.+|||+|||+|.++..++..+..+++|+|+++. .+.++++|+.+++ ++||+|+++...+
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 3578899999999999999999987668999999976 2568889988864 4899999984332
Q ss_pred hh---CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 160 AL---FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 160 ~~---~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
.. ...++++++.+.+ ||.+++.+.. ......+.+.+...++
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~~~--~~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHLAK--PEVRRFIEKFSWEHGF 167 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEECC--HHHHHHHHHHHHHTTE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEeCC--cCCHHHHHHHHHHCCC
Confidence 22 2356788888888 5554433222 3344555666665553
No 229
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.01 E-value=1.9e-09 Score=89.35 Aligned_cols=118 Identities=11% Similarity=0.045 Sum_probs=77.4
Q ss_pred hcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC------C-------CeEEEcCCCCCCCCCCceeEEEcc
Q 027039 90 GKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------L-------PLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~------~-------~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
+...++++.+|||+|||+|.+++..++. +...++|+|+... + +...+.+++...+++++||+|+|.
T Consensus 68 ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD 147 (277)
T 3evf_A 68 ERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCD 147 (277)
T ss_dssp HTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred HhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEec
Confidence 3356789999999999999999988876 6667887777632 1 123455555566778899999997
Q ss_pred cchh----hhCH---HHHHHHHHhccccC-cEEEEEeecCCcccHHH----HHHHHhcCceeEe
Q 027039 156 HLAE----ALFP---SRFVGEMERTVKIG-GVCMVLMEECAGREIKQ----IVELFRTSRFVDA 207 (229)
Q Consensus 156 ~~~~----~~~~---~~~l~~~~~~Lkpg-G~lil~~~~~~~~~~~~----l~~l~~~~~~~~~ 207 (229)
-... ..+- ..+++.+.++|||| |.|++=+-.....+..+ +...|++....+.
T Consensus 148 ~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP 211 (277)
T 3evf_A 148 IGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP 211 (277)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT
T ss_pred CccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC
Confidence 3222 1121 23578889999999 99876444421333333 4444555444444
No 230
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.01 E-value=8.5e-10 Score=94.87 Aligned_cols=107 Identities=13% Similarity=0.121 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
.++.+|||+|||+|.++.. +. +..+|+|+|+++. .+.++++|+.+.. ++||+|+++--.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 6889999999999999999 77 5669999999975 3568889988865 789999996322
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh---cCceeEeeeeee
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR---TSRFVDAANVTV 212 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~---~~~~~~~~~~~~ 212 (229)
. ..+++.++.+.|+|||.+++..-... ...+.+.+. ......++.+..
T Consensus 269 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~~~~~~~i~~~~~v~~ 319 (336)
T 2yx1_A 269 F---AHKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFEKKCDCEVLEKRIVKS 319 (336)
T ss_dssp T---GGGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred h---HHHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHHHhcCCcEEEEEEEec
Confidence 2 23788999999999999886554433 333444444 233334455544
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.01 E-value=3.8e-10 Score=91.11 Aligned_cols=87 Identities=17% Similarity=0.120 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCC-C-CCC----Ccee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNL-P-FFD----EAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~~~----~~fD 150 (229)
.++.+|||||||+|..+..+++. + ..+++++|+++. .+.++++|+.+. + +.+ ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 57889999999999999999986 3 569999999986 245777877542 1 111 6899
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|++... ......+++++.+.|||||.+++.
T Consensus 148 ~v~~d~~--~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVDAD--KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEECSC--STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC--HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9998643 224678999999999999998763
No 232
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.01 E-value=1.7e-09 Score=88.09 Aligned_cols=88 Identities=11% Similarity=0.129 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCCC----------------CeEEEcCCCC-CC------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDSL----------------PLVSRADPHN-LP------------ 143 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~~----------------~~~~~~d~~~-~~------------ 143 (229)
.++.+|||||||+|..+..+++. + .++|+++|+++.+ +.++.+|+.+ ++
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 57889999999999999999987 3 5699999999762 5577887654 22
Q ss_pred --CCC--CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 144 --FFD--EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 144 --~~~--~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
|++ ++||+|++.... .....+++++.+.|||||.+++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK--ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG--GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCH--HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 233 789999987432 245688999999999999988654
No 233
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.01 E-value=1.4e-09 Score=91.25 Aligned_cols=91 Identities=20% Similarity=0.285 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCCC-CCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHNL-PFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~~-~~~~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. +..+++++|+++. .++++.+|+.+. +..+++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46789999999999999999987 5679999999865 234677777652 22367899999
Q ss_pred cccchhh-----hCHHHHHHHHHhccccCcEEEEEee
Q 027039 154 TAHLAEA-----LFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 154 ~~~~~~~-----~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
++..... +...++++++.+.|||||.+++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 9633221 1226899999999999999887654
No 234
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.01 E-value=4.4e-10 Score=95.46 Aligned_cols=91 Identities=24% Similarity=0.260 Sum_probs=69.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC-------------------CCeEEEcCCCC-CCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS-------------------LPLVSRADPHN-LPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. +..+++++|+++. .++++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 56789999999999999999988 5679999999865 24577777765 344468999999
Q ss_pred cccchhh-----hCHHHHHHHHHhccccCcEEEEEee
Q 027039 154 TAHLAEA-----LFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 154 ~~~~~~~-----~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
++..... +...++++++.+.|||||.+++...
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 8643321 1235789999999999999887653
No 235
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.99 E-value=5.5e-11 Score=97.73 Aligned_cols=91 Identities=20% Similarity=0.246 Sum_probs=67.9
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-------------CeEEEcCCCCCCCCC-CceeEEEccc--
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNLPFFD-EAFDVAFTAH-- 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-------------~~~~~~d~~~~~~~~-~~fD~V~~~~-- 156 (229)
.+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+ +.++++|+.++++++ ++| .|++|-
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py 103 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPY 103 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCS
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCc
Confidence 45688899999999999999999987 599999999873 347789999888764 689 677761
Q ss_pred ---------chhhh-CHHHHH----HHHHhccccCcEEEEEee
Q 027039 157 ---------LAEAL-FPSRFV----GEMERTVKIGGVCMVLME 185 (229)
Q Consensus 157 ---------~~~~~-~~~~~l----~~~~~~LkpgG~lil~~~ 185 (229)
+..|. .+...+ +.+.++|||||.+.+.+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 104 HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 11111 222334 668999999998765543
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.99 E-value=8.7e-10 Score=99.13 Aligned_cols=91 Identities=13% Similarity=0.141 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCCC-CCCceeEEEcc--
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLPF-FDEAFDVAFTA-- 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~-~~~~fD~V~~~-- 155 (229)
++.+|||+|||+|..+..+++. +.+.|+|+|+++. .+.++++|+.+++. .+++||.|+++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 8899999999999999999986 3469999999976 34578889888653 46789999984
Q ss_pred ----cchhhh-----------------CHHHHHHHHHhccccCcEEEEEeec
Q 027039 156 ----HLAEAL-----------------FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 156 ----~~~~~~-----------------~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.+.... ...+++.++.++|||||+++..+-.
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 111100 1246899999999999998876654
No 237
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.98 E-value=3.8e-10 Score=92.28 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-CCeEEEecCCCC----------------CCeEEEcCCCCC-C-C-----CCCce
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-VADVTGVELMDS----------------LPLVSRADPHNL-P-F-----FDEAF 149 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-~~~v~~vD~s~~----------------~~~~~~~d~~~~-~-~-----~~~~f 149 (229)
.++.+|||||||+|..+..+++. + .++++++|+++. .+.++.+|+.+. + + ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 56789999999999999999886 3 569999999976 245888887653 2 2 25789
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+|++... ......+++++.+.|||||.+++-
T Consensus 149 D~I~~d~~--~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 149 DFGFVDAD--KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEECSC--GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc--hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99998632 224678999999999999997754
No 238
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.98 E-value=6.1e-10 Score=95.00 Aligned_cols=91 Identities=20% Similarity=0.185 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC-------------------CeEEEcCCCC-CCCCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL-------------------PLVSRADPHN-LPFFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~-------------------~~~~~~d~~~-~~~~~~~fD~V~ 153 (229)
.++.+|||||||+|..+..+++. +..+|+++|+++.+ ++++.+|+.+ ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45689999999999999999988 56799999998652 3466667654 233467899999
Q ss_pred cccchhhh-----CHHHHHHHHHhccccCcEEEEEee
Q 027039 154 TAHLAEAL-----FPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 154 ~~~~~~~~-----~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
++...... ...++++++.+.|||||.+++...
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 86432211 126899999999999999887653
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.97 E-value=4.4e-10 Score=98.62 Aligned_cols=92 Identities=17% Similarity=0.046 Sum_probs=72.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCC----CCCceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPF----FDEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~----~~~~fD~V~~ 154 (229)
+++.+|||+|||+|.++..++..|..+|+|+|+++. .+.++.+|+.+... .+++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 488999999999999999999987779999999976 24588888876421 2578999999
Q ss_pred cc---------chhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 155 AH---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 155 ~~---------~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+- +.... ...+++.++.+.|||||.+++....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 62 12222 4577899999999999998766544
No 240
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.97 E-value=3.7e-10 Score=101.02 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCCC--------------CeEEEcCCCCCC-CCCCceeEEEccc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL--------------PLVSRADPHNLP-FFDEAFDVAFTAH 156 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~~--------------~~~~~~d~~~~~-~~~~~fD~V~~~~ 156 (229)
.+++.+|||+|||+|..+..+++. +.+.|+|+|+++.+ +.++++|+.+++ +.+++||+|+++.
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 468999999999999999999976 34699999999862 457778877765 3468999999641
Q ss_pred ------ch-------hh---------h-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 157 ------LA-------EA---------L-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 ------~~-------~~---------~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+. +. . ...+++.++.+.|||||+++..+-.
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 10 00 0 1267899999999999998876544
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.96 E-value=9.1e-10 Score=103.33 Aligned_cols=92 Identities=17% Similarity=0.197 Sum_probs=74.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCC-CCCCCCceeEEEccc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHN-LPFFDEAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~-~~~~~~~fD~V~~~~ 156 (229)
.++.+|||+|||+|.++..++..|..+|+++|+|+. .+.++++|+.+ ++..+++||+|+++-
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 578999999999999999999888778999999976 24588888876 344568999999962
Q ss_pred --c---------hhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 157 --L---------AEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 --~---------~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+ .... +..+++.++.++|||||.+++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 1 1222 4578899999999999999876655
No 242
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.95 E-value=1e-09 Score=96.03 Aligned_cols=92 Identities=11% Similarity=0.078 Sum_probs=70.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-----------------CeEEEcCCCC-CCC---CCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------PLVSRADPHN-LPF---FDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-----------------~~~~~~d~~~-~~~---~~~~fD~V~ 153 (229)
.++.+|||+|||+|.++..++..|..+|+++|+++.+ +.++++|+.+ ++. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5788999999999999999999877799999999872 3578888765 221 245899999
Q ss_pred ccc--c-------hhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 154 TAH--L-------AEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~--~-------~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++- + .... ...+++.++.+.|+|||.+++....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 861 1 1111 2456788889999999998866654
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.94 E-value=7.3e-10 Score=98.93 Aligned_cols=110 Identities=16% Similarity=0.124 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCC-CCCCceeEEEcc
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLP-FFDEAFDVAFTA 155 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-~~~~~fD~V~~~ 155 (229)
.+++.+|||+|||+|..+..+++. +.+.|+++|+++. .+.++++|+.+++ ..+++||.|+++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 478999999999999999999986 4469999999986 2446777877654 235799999985
Q ss_pred cc---hhhh--C------------------HHHHHHHHHhccccCcEEEEEeecCCc-ccHHHHHHHHhcCc
Q 027039 156 HL---AEAL--F------------------PSRFVGEMERTVKIGGVCMVLMEECAG-REIKQIVELFRTSR 203 (229)
Q Consensus 156 ~~---~~~~--~------------------~~~~l~~~~~~LkpgG~lil~~~~~~~-~~~~~l~~l~~~~~ 203 (229)
.- ...+ + ..+++.++.+.|||||.++..+-.... +....+..+.+...
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 21 0000 1 137899999999999998866654332 23334445555544
No 244
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.92 E-value=3.2e-09 Score=91.36 Aligned_cols=109 Identities=15% Similarity=0.220 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CC-----CeEEEecCCCCC--------------CeEEEcCCCCCCCCCCceeEEEc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GV-----ADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~-----~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
.++.+|||+|||+|.++..+++. +. .+++|+|+++.+ ..+.++|.... ..+++||+|++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEE
Confidence 46789999999999999998876 21 589999999772 45888887663 34678999999
Q ss_pred ccchhhh------------------CH-HHHHHHHHhccccCcEEEEEeecC--CcccHHHHHHHHhcCce
Q 027039 155 AHLAEAL------------------FP-SRFVGEMERTVKIGGVCMVLMEEC--AGREIKQIVELFRTSRF 204 (229)
Q Consensus 155 ~~~~~~~------------------~~-~~~l~~~~~~LkpgG~lil~~~~~--~~~~~~~l~~l~~~~~~ 204 (229)
|--..+. +. ..+++++.+.|||||+++++++.. .......+.+.+.....
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 8321111 11 258999999999999999888553 23344566665554433
No 245
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.91 E-value=3.4e-09 Score=89.06 Aligned_cols=60 Identities=22% Similarity=0.146 Sum_probs=51.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.+.++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.+.+++ +||+|+++
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~n 100 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVAN 100 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEE
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEe
Confidence 457889999999999999999999865 9999999975 245889999987764 79999997
No 246
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=2e-09 Score=88.83 Aligned_cols=107 Identities=13% Similarity=0.116 Sum_probs=81.4
Q ss_pred HhhhhhHHHHHHHHHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCCCe--------------EEEcCC
Q 027039 75 KQQVTSYAHFFKHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSLPL--------------VSRADP 139 (229)
Q Consensus 75 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~~~--------------~~~~d~ 139 (229)
+.+...+..++..+.+. +.+..+|||||||+|.++..++.. +..+|+++|+++.+++ +.+.|.
T Consensus 113 reRLp~lD~fY~~i~~~--i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~ 190 (281)
T 3lcv_B 113 RERLPHLDEFYRELFRH--LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADL 190 (281)
T ss_dssp HHHGGGHHHHHHHHGGG--SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred HHHhHhHHHHHHHHHhc--cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeee
Confidence 44455556666555432 266889999999999999999888 7789999999988433 667776
Q ss_pred CCCCCCCCceeEEEcccchhhhCH---HHHHHHHHhccccCcEEEEEeec
Q 027039 140 HNLPFFDEAFDVAFTAHLAEALFP---SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 140 ~~~~~~~~~fD~V~~~~~~~~~~~---~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
..-+ +.++||+++++-+.++++. ...+ ++.+.|+|+|.++ ..+.
T Consensus 191 ~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvV-Sfp~ 237 (281)
T 3lcv_B 191 LEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVV-TFPT 237 (281)
T ss_dssp TTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEE-EEEC
T ss_pred cccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEE-eccc
Confidence 6654 4688999999988888833 2445 9999999999977 6665
No 247
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.86 E-value=4.2e-09 Score=92.42 Aligned_cols=92 Identities=18% Similarity=0.105 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCCCCC----CCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHNLPF----FDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~~----~~~~fD~V~ 153 (229)
.++.+|||+|||+|.++..++..|..+|+|+|+++. .+.++.+|+.+... .+++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 578899999999999999999987779999999964 24588888776421 146899999
Q ss_pred ccc---------chhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 154 TAH---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 154 ~~~---------~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++- +.... ...+++.++.+.|||||.+++....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 972 11111 3568899999999999998866544
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.85 E-value=5.3e-09 Score=88.48 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=48.0
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
.+.++.+|||||||+|.++..+++.+. +|+|+|+++. .+.++++|+.+.++ .+||+|+++-
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~ 114 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANI 114 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEEC
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcC
Confidence 457889999999999999999999864 9999999975 34578889888775 4899999973
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.83 E-value=6e-09 Score=88.03 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=57.2
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCCCceeEEEc
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~~~fD~V~~ 154 (229)
+.+...+.++.+|||||||+|.++..+++.+ .+|+|+|+++. .+.++++|+.+.++++.+||.|++
T Consensus 42 Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~ 120 (295)
T 3gru_A 42 AVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVA 120 (295)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEE
T ss_pred HHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEE
Confidence 3333456788999999999999999999985 49999999986 346999999999888888999998
Q ss_pred c
Q 027039 155 A 155 (229)
Q Consensus 155 ~ 155 (229)
|
T Consensus 121 N 121 (295)
T 3gru_A 121 N 121 (295)
T ss_dssp E
T ss_pred e
Confidence 7
No 250
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.82 E-value=1.7e-09 Score=94.58 Aligned_cols=90 Identities=18% Similarity=0.087 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCCC----CCCceeEEEccc
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLPF----FDEAFDVAFTAH 156 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~----~~~~fD~V~~~~ 156 (229)
++.+|||+|||+|.++..++.. ..+|+|+|+++. .+.++++|+.+... .+++||+|+++-
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 7789999999999999999988 569999999976 25688888876421 257899999962
Q ss_pred ---------chhhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 157 ---------LAEAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 157 ---------~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.... ...+++.++.+.|||||.+++....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11222 3577899999999999998866654
No 251
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.82 E-value=1.4e-08 Score=84.38 Aligned_cols=117 Identities=9% Similarity=-0.082 Sum_probs=74.1
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC----C---------eEEEcCCCCCCCCCCceeEEEccc
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----P---------LVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~----~---------~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
...++++.+|||+|||+|.+++..++. +...+.|+|+...+ + .....+.....++.+++|+|+|.-
T Consensus 85 K~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 85 RGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDI 164 (282)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecC
Confidence 346789999999999999999988865 77789999987441 1 112222222335578999999972
Q ss_pred chh-------hhCHHHHHHHHHhccccC--cEEEEEeecCCcccHHH----HHHHHhcCceeEe
Q 027039 157 LAE-------ALFPSRFVGEMERTVKIG--GVCMVLMEECAGREIKQ----IVELFRTSRFVDA 207 (229)
Q Consensus 157 ~~~-------~~~~~~~l~~~~~~Lkpg--G~lil~~~~~~~~~~~~----l~~l~~~~~~~~~ 207 (229)
... +..-..++.-+.++|||| |.|++=+-.....+..+ +...|+.....+.
T Consensus 165 ApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~V~~~KP 228 (282)
T 3gcz_A 165 GESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGGGLVRVP 228 (282)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCCEEECCT
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCCEEEEcC
Confidence 211 111124577778999999 99776554421233333 4445555444444
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.78 E-value=2e-08 Score=89.37 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--------------CCCeEEEecCCCC-----------------CCeEEEcCCCCCC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--------------GVADVTGVELMDS-----------------LPLVSRADPHNLP 143 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--------------g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~ 143 (229)
.++.+|||.|||+|.+...+++. ....++|+|+++. ...+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 56789999999999999887753 1248999999875 2357888887765
Q ss_pred CCCCceeEEEcccchhhh---C---------------HHHHHHHHHhccccCcEEEEEeecC---CcccHHHHHH-HHhc
Q 027039 144 FFDEAFDVAFTAHLAEAL---F---------------PSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQIVE-LFRT 201 (229)
Q Consensus 144 ~~~~~fD~V~~~~~~~~~---~---------------~~~~l~~~~~~LkpgG~lil~~~~~---~~~~~~~l~~-l~~~ 201 (229)
.. .+||+|++|--.... . ...+++.+.+.|||||+++++++.. .......+.+ ++++
T Consensus 250 ~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~ 328 (445)
T 2okc_A 250 PS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQD 328 (445)
T ss_dssp CS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHH
T ss_pred cc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCcccccCcHHHHHHHHHHhc
Confidence 43 489999998211110 0 1478999999999999999888652 2222344554 5666
Q ss_pred CceeEeeee
Q 027039 202 SRFVDAANV 210 (229)
Q Consensus 202 ~~~~~~~~~ 210 (229)
..+..+..+
T Consensus 329 ~~l~~ii~l 337 (445)
T 2okc_A 329 FNLHTILRL 337 (445)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEeC
Confidence 666666554
No 253
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.77 E-value=5.6e-08 Score=86.25 Aligned_cols=113 Identities=13% Similarity=0.161 Sum_probs=74.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCC----CCCCCCceeEEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHN----LPFFDEAFDVAF 153 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~----~~~~~~~fD~V~ 153 (229)
...++.+|||+|||+|.++..++..+ .+|+|+|+++. .+.++++|+.+ +++.+++||+|+
T Consensus 283 ~~~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 283 DVQPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp TCCTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred cCCCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 34678899999999999999999984 59999999975 35699999987 345677999999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHH-HHHHHHh-cCceeEeeeeee
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIK-QIVELFR-TSRFVDAANVTV 212 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~-~l~~l~~-~~~~~~~~~~~~ 212 (229)
++--.... .++++.+.+ ++|++.+++... ..+.. .+..+.+ ..++.++.-++.
T Consensus 362 ~dPPr~g~--~~~~~~l~~-~~p~~ivyvsc~---p~tlard~~~l~~~Gy~~~~~~~~d~ 416 (433)
T 1uwv_A 362 LDPARAGA--AGVMQQIIK-LEPIRIVYVSCN---PATLARDSEALLKAGYTIARLAMLDM 416 (433)
T ss_dssp ECCCTTCC--HHHHHHHHH-HCCSEEEEEESC---HHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred ECCCCccH--HHHHHHHHh-cCCCeEEEEECC---hHHHHhhHHHHHHCCcEEEEEEEecc
Confidence 96211111 234444443 788887654322 22222 2333332 455555555544
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.76 E-value=1.8e-08 Score=88.17 Aligned_cols=99 Identities=10% Similarity=0.056 Sum_probs=74.1
Q ss_pred HHHhcccCCCCCeEEEEcCCCChhhHHHHhCCC---------------------------------------CeEEEecC
Q 027039 87 HLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVEL 127 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~---------------------------------------~~v~~vD~ 127 (229)
.++......++.++||.+||+|.+++.++..+. .+|+|+|+
T Consensus 186 ~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDi 265 (385)
T 3ldu_A 186 GLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDI 265 (385)
T ss_dssp HHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEES
T ss_pred HHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEEC
Confidence 344445667889999999999999998876521 37999999
Q ss_pred CCC----------------CCeEEEcCCCCCCCCCCceeEEEcc--cc---hhhhCHHHHHHHHHhcccc--CcEEEEEe
Q 027039 128 MDS----------------LPLVSRADPHNLPFFDEAFDVAFTA--HL---AEALFPSRFVGEMERTVKI--GGVCMVLM 184 (229)
Q Consensus 128 s~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~--~~---~~~~~~~~~l~~~~~~Lkp--gG~lil~~ 184 (229)
++. .+.+.++|+.+++.+ ++||+|++| +. .......++.+++.+.||+ ||.+++++
T Consensus 266 d~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 266 DEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp CHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 987 245899999988754 589999998 21 1111345677777777776 99999888
Q ss_pred ec
Q 027039 185 EE 186 (229)
Q Consensus 185 ~~ 186 (229)
+.
T Consensus 345 ~~ 346 (385)
T 3ldu_A 345 SY 346 (385)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.75 E-value=2.9e-08 Score=87.09 Aligned_cols=98 Identities=13% Similarity=0.039 Sum_probs=72.7
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhCCC---------------------------------------CeEEEecCC
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVELM 128 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~---------------------------------------~~v~~vD~s 128 (229)
++......++..+||.+||+|.+++..+..+. .+|+|+|++
T Consensus 193 ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 272 (393)
T 3k0b_A 193 LVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDID 272 (393)
T ss_dssp HHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECC
Confidence 34445567889999999999999988876521 359999999
Q ss_pred CC----------------CCeEEEcCCCCCCCCCCceeEEEcc--cchhh---hCHHHHHHHHHhcccc--CcEEEEEee
Q 027039 129 DS----------------LPLVSRADPHNLPFFDEAFDVAFTA--HLAEA---LFPSRFVGEMERTVKI--GGVCMVLME 185 (229)
Q Consensus 129 ~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~--~~~~~---~~~~~~l~~~~~~Lkp--gG~lil~~~ 185 (229)
+. .+.++++|+.+++.+ .+||+|++| +.... ....++.+++.+.+|+ ||.++++++
T Consensus 273 ~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 273 ARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 86 256999999998764 589999998 32111 1234566666666666 999998887
Q ss_pred c
Q 027039 186 E 186 (229)
Q Consensus 186 ~ 186 (229)
.
T Consensus 352 ~ 352 (393)
T 3k0b_A 352 Y 352 (393)
T ss_dssp C
T ss_pred C
Confidence 5
No 256
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.75 E-value=4.6e-09 Score=86.27 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=53.1
Q ss_pred HHHHhcccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCC-CceeE
Q 027039 86 KHLQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFD-EAFDV 151 (229)
Q Consensus 86 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~-~~fD~ 151 (229)
..+.....+.++.+|||||||+|.++..+++.+ .+|+|+|+++. .+.++++|+.++++++ ..| .
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~ 97 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-K 97 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-E
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-E
Confidence 334444455788999999999999999999987 59999999975 3568999999988764 455 4
Q ss_pred EEcc
Q 027039 152 AFTA 155 (229)
Q Consensus 152 V~~~ 155 (229)
|++|
T Consensus 98 vv~n 101 (244)
T 1qam_A 98 IFGN 101 (244)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5555
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.72 E-value=3.7e-08 Score=86.16 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=73.1
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhCCC---------------------------------------CeEEEecCC
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSIGV---------------------------------------ADVTGVELM 128 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g~---------------------------------------~~v~~vD~s 128 (229)
++.....+++..++|.+||+|.++++.+..+. .+++|+|++
T Consensus 186 ll~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid 265 (384)
T 3ldg_A 186 IILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFD 265 (384)
T ss_dssp HHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECC
Confidence 34445567889999999999999998876521 359999999
Q ss_pred CC----------------CCeEEEcCCCCCCCCCCceeEEEcc--cchh---hhCHHHHHHHHHhcccc--CcEEEEEee
Q 027039 129 DS----------------LPLVSRADPHNLPFFDEAFDVAFTA--HLAE---ALFPSRFVGEMERTVKI--GGVCMVLME 185 (229)
Q Consensus 129 ~~----------------~~~~~~~d~~~~~~~~~~fD~V~~~--~~~~---~~~~~~~l~~~~~~Lkp--gG~lil~~~ 185 (229)
+. .+.++++|+.+++.+ .+||+|++| +-.. .....++.+++.+.||+ ||.++++++
T Consensus 266 ~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 266 GRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 86 255899999998764 589999998 2111 11345666777777766 999998888
Q ss_pred c
Q 027039 186 E 186 (229)
Q Consensus 186 ~ 186 (229)
.
T Consensus 345 ~ 345 (384)
T 3ldg_A 345 D 345 (384)
T ss_dssp C
T ss_pred C
Confidence 5
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.72 E-value=2.2e-08 Score=86.44 Aligned_cols=133 Identities=15% Similarity=0.053 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-----------------------CeEEEcCCCCCCC----CCC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------------------PLVSRADPHNLPF----FDE 147 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-----------------------~~~~~~d~~~~~~----~~~ 147 (229)
.++.+||+||||+|..+..+++.+..+|+++|+++.. ++++.+|+.+.-- .++
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3578999999999999999988865799999999762 3455556554221 357
Q ss_pred ceeEEEcccch-h------hhCHHHHHHHH----HhccccCcEEEEEeecCCcccHHH-----HHHHHhcCceeE-eeee
Q 027039 148 AFDVAFTAHLA-E------ALFPSRFVGEM----ERTVKIGGVCMVLMEECAGREIKQ-----IVELFRTSRFVD-AANV 210 (229)
Q Consensus 148 ~fD~V~~~~~~-~------~~~~~~~l~~~----~~~LkpgG~lil~~~~~~~~~~~~-----l~~l~~~~~~~~-~~~~ 210 (229)
+||+|++.... . ++...++++.+ .++|+|||.+++........+... +.++|....+.+ ...+
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~~~~v 346 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCV 346 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECC
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeEeeec
Confidence 89999997432 1 12345667766 899999999887765543222111 333455555532 2334
Q ss_pred eecCCeeEEEEEEeccC
Q 027039 211 TVNGSNMTRILMRRTRL 227 (229)
Q Consensus 211 ~~~~~~~~~~~~~~~~~ 227 (229)
..+.+.+......|+.+
T Consensus 347 Psy~~~w~f~~~~k~~~ 363 (364)
T 2qfm_A 347 PSYLELWVFYTVWKKAK 363 (364)
T ss_dssp GGGSSCEEEEEEEECCC
T ss_pred CCchhheEeEEeecccC
Confidence 44544555555454443
No 259
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.64 E-value=7.9e-08 Score=85.15 Aligned_cols=85 Identities=19% Similarity=0.262 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC--------------CeEEEcCCCCCCCCCCceeEEEcccchh
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL--------------PLVSRADPHNLPFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~--------------~~~~~~d~~~~~~~~~~fD~V~~~~~~~ 159 (229)
+.++.+|||+|||+|.++..+++.+. +|+|+|+++.+ +.++.+|+.+... .+||+|+++--..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRA 364 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTT
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCcc
Confidence 37889999999999999999999854 99999999762 5689999988643 2899999963211
Q ss_pred hhCHHHHHHHHHhccccCcEEEEE
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
. ....+++.+. .|+|||.+++.
T Consensus 365 g-~~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 365 G-LHPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp C-SCHHHHHHHH-HHCCSEEEEEE
T ss_pred c-hHHHHHHHHH-hcCCCcEEEEE
Confidence 1 1234555554 49999987754
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.63 E-value=3.7e-08 Score=82.18 Aligned_cols=61 Identities=23% Similarity=0.178 Sum_probs=52.3
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC------------CeEEEcCCCCCCCCCC-ceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL------------PLVSRADPHNLPFFDE-AFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~------------~~~~~~d~~~~~~~~~-~fD~V~~~ 155 (229)
.+.++ +|||||||+|.++..+++.+ .+|+|+|+++.+ +.++++|+.++++++. .+|.|++|
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEec
Confidence 45778 99999999999999999997 499999999873 4589999998887543 68999997
No 261
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.63 E-value=1.6e-07 Score=78.49 Aligned_cols=116 Identities=13% Similarity=0.003 Sum_probs=73.4
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC----C---------eEEEcCCCCCCCCCCceeEEEcccc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL----P---------LVSRADPHNLPFFDEAFDVAFTAHL 157 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~----~---------~~~~~d~~~~~~~~~~fD~V~~~~~ 157 (229)
..++++.+|||+||++|.++..+++. +...|.|+|+...+ . .....+..-..+..+.+|+|+|.-.
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A 156 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG 156 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc
Confidence 56689999999999999999999986 77789999987431 0 1122222223345679999999722
Q ss_pred hh----hhC---HHHHHHHHHhccccC-cEEEEEeecCCcccHHHH----HHHHhcCceeEe
Q 027039 158 AE----ALF---PSRFVGEMERTVKIG-GVCMVLMEECAGREIKQI----VELFRTSRFVDA 207 (229)
Q Consensus 158 ~~----~~~---~~~~l~~~~~~Lkpg-G~lil~~~~~~~~~~~~l----~~l~~~~~~~~~ 207 (229)
.. ..+ -..++.-+.++|+|| |.|++=+-...+.+..++ ...|+.....+.
T Consensus 157 PnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KP 218 (300)
T 3eld_A 157 ESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVP 218 (300)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeC
Confidence 22 111 134577778999999 997765443113333333 344544444333
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.63 E-value=4.3e-08 Score=81.08 Aligned_cols=62 Identities=10% Similarity=0.060 Sum_probs=51.8
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCCCCC----CceeEEEc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHNLPFFD----EAFDVAFT 154 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~~~~----~~fD~V~~ 154 (229)
..+.++.+|||||||+|.++..+++.+ .+|+|+|+++. .+.++++|+.++++++ ++|| |++
T Consensus 25 ~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~ 102 (255)
T 3tqs_A 25 IHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVG 102 (255)
T ss_dssp HCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEE
T ss_pred cCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEe
Confidence 355788999999999999999999997 59999999976 3569999999987643 5788 666
Q ss_pred c
Q 027039 155 A 155 (229)
Q Consensus 155 ~ 155 (229)
|
T Consensus 103 N 103 (255)
T 3tqs_A 103 N 103 (255)
T ss_dssp E
T ss_pred c
Confidence 5
No 263
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.60 E-value=4.8e-07 Score=78.22 Aligned_cols=81 Identities=14% Similarity=0.008 Sum_probs=65.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------CCeEEEcCCCCCCCCCCceeEEEcccchhhhCHH
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPS 164 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~ 164 (229)
.+++|+++||+||.+|.++..+.++|. .|+|+|+.+- .+.++++|+.....+.+.||+|+|.-... |.
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~ 283 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PA 283 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HH
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC---hH
Confidence 458999999999999999999999975 9999998764 35688999988777778999999954443 76
Q ss_pred HHHHHHHhccccC
Q 027039 165 RFVGEMERTVKIG 177 (229)
Q Consensus 165 ~~l~~~~~~Lkpg 177 (229)
..+..+.+.+..|
T Consensus 284 ~~~~l~~~wl~~~ 296 (375)
T 4auk_A 284 KVAALMAQWLVNG 296 (375)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HhHHHHHHHHhcc
Confidence 6666666666655
No 264
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.58 E-value=4.7e-07 Score=74.16 Aligned_cols=108 Identities=13% Similarity=0.025 Sum_probs=68.6
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhC-CC----CeEEEec--CCCCC-----CeEEE---c-CCCCCCCCCCceeEEEcc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSI-GV----ADVTGVE--LMDSL-----PLVSR---A-DPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~-g~----~~v~~vD--~s~~~-----~~~~~---~-d~~~~~~~~~~fD~V~~~ 155 (229)
..++++++|+|+||++|.+++..++. +. +.++|+| +.|.. +.+++ + |+.+++ ..++|+|+|.
T Consensus 69 ~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSD 146 (269)
T 2px2_A 69 RFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCD 146 (269)
T ss_dssp TSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEEC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeC
Confidence 46799999999999999999999887 33 4566777 33331 13333 6 888743 5689999996
Q ss_pred cchh----hhCH---HHHHHHHHhccccCc-EEEEEeecCCcccHH----HHHHHHhc
Q 027039 156 HLAE----ALFP---SRFVGEMERTVKIGG-VCMVLMEECAGREIK----QIVELFRT 201 (229)
Q Consensus 156 ~~~~----~~~~---~~~l~~~~~~LkpgG-~lil~~~~~~~~~~~----~l~~l~~~ 201 (229)
-... ..+. ..++.-+.++|+||| .|++=+-..+..++. .+...|+.
T Consensus 147 MAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~ 204 (269)
T 2px2_A 147 IGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGG 204 (269)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCC
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCC
Confidence 2111 1111 225666778999999 766544443223333 34444554
No 265
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.56 E-value=2.6e-07 Score=78.51 Aligned_cols=107 Identities=8% Similarity=-0.017 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------CCeEEEcCCCCCCCCC---CceeEEE
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------LPLVSRADPHNLPFFD---EAFDVAF 153 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~~---~~fD~V~ 153 (229)
.+++.+|||+|||+|..+..+++. +.++|+++|+++. .+.++++|+.+++..+ ++||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 478999999999999999999986 4579999999976 3568888988765432 5799999
Q ss_pred cc------c-chhhh-----------C-------HHHHHHHHHhccccCcEEEEEeecCC-cccHHHHHHHHhc
Q 027039 154 TA------H-LAEAL-----------F-------PSRFVGEMERTVKIGGVCMVLMEECA-GREIKQIVELFRT 201 (229)
Q Consensus 154 ~~------~-~~~~~-----------~-------~~~~l~~~~~~LkpgG~lil~~~~~~-~~~~~~l~~l~~~ 201 (229)
++ . +..+. + ..+++..+.+.++ ||+++..+-... .++...+..++++
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~ 252 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQ 252 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTT
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHh
Confidence 74 1 11110 1 1346777778887 898665443322 2333345555553
No 266
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.54 E-value=1.3e-07 Score=82.18 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=69.9
Q ss_pred CCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC--CCC-------------
Q 027039 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP--FFD------------- 146 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~--~~~------------- 146 (229)
+.+|||+|||+|.++..++.. ..+|+|+|+++. .+.++.+|+.+.. +.+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999999885 459999999986 2458888886631 211
Q ss_pred -CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee
Q 027039 147 -EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 147 -~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
.+||+|+++--.. .+..++.+.|+++|.++.+ +....--.+.+..+.+..++.++.-++.
T Consensus 293 ~~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivyv-sc~p~t~ard~~~l~~~y~~~~~~~~D~ 353 (369)
T 3bt7_A 293 SYQCETIFVDPPRS-----GLDSETEKMVQAYPRILYI-SCNPETLCKNLETLSQTHKVERLALFDQ 353 (369)
T ss_dssp GCCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEEE-ESCHHHHHHHHHHHHHHEEEEEEEEECC
T ss_pred cCCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEEE-ECCHHHHHHHHHHHhhCcEEEEEEeecc
Confidence 3799999752111 1345667777899987644 3321111223333433455555555544
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.54 E-value=5.1e-07 Score=75.94 Aligned_cols=92 Identities=23% Similarity=0.266 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------------CCeEEEcCCCC-CCCCCCceeEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------------LPLVSRADPHN-LPFFDEAFDVA 152 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------------~~~~~~~d~~~-~~~~~~~fD~V 152 (229)
....+||-||.|.|..+.++.+. +..+|+.+|+++. .++++.+|+.. +.-.+++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 56789999999999999999987 6779999999987 23478888877 33456799999
Q ss_pred Ecccc-----hhhhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 153 FTAHL-----AEALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 153 ~~~~~-----~~~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.... ...+.-.++++.+.+.|+|||.++...+.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 98622 22334578999999999999998866554
No 268
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.53 E-value=1.6e-07 Score=77.67 Aligned_cols=123 Identities=14% Similarity=0.068 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHh--------CC-----CCeEEEecCCCC-------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNS--------IG-----VADVTGVELMDS------------------------------- 130 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~--------~g-----~~~v~~vD~s~~------------------------------- 130 (229)
+++.+|||||+|+|..+..+.+ .+ ..+++++|..+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 4567999999999998877543 22 248999998761
Q ss_pred ------------CCeEEEcCCCC-CCCCC----CceeEEEcccchhhhC----HHHHHHHHHhccccCcEEEEEeecCCc
Q 027039 131 ------------LPLVSRADPHN-LPFFD----EAFDVAFTAHLAEALF----PSRFVGEMERTVKIGGVCMVLMEECAG 189 (229)
Q Consensus 131 ------------~~~~~~~d~~~-~~~~~----~~fD~V~~~~~~~~~~----~~~~l~~~~~~LkpgG~lil~~~~~~~ 189 (229)
.+.++.+|+.+ ++..+ ..||+|+...+....+ -.++++++.+.|||||.++..+. .
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa--a- 215 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS--A- 215 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC--B-
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC--C-
Confidence 12366778766 44322 2799999864332222 36799999999999999763221 1
Q ss_pred ccHHHHHHHHhcCceeEeeeeeecCCeeEEEEEEe
Q 027039 190 REIKQIVELFRTSRFVDAANVTVNGSNMTRILMRR 224 (229)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (229)
..+.+.+...+|. +..+.++|.+..++...+
T Consensus 216 ---~~vrr~L~~aGF~-v~~~~g~~~kr~m~~a~~ 246 (257)
T 2qy6_A 216 ---GFVRRGLQEAGFT-MQKRKGFGRKREMLCGVM 246 (257)
T ss_dssp ---HHHHHHHHHHTEE-EEEECCSTTCCCEEEEEE
T ss_pred ---HHHHHHHHHCCCE-EEeCCCCCCCCceEEEEe
Confidence 2466667777886 667788887755555444
No 269
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.53 E-value=1.6e-07 Score=70.60 Aligned_cols=61 Identities=15% Similarity=0.018 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCCC-hhhHHHHh-CCCCeEEEecCCCCCCeEEEcCCCCCCCCC-CceeEEEccc
Q 027039 95 FNHSKVLCVSAGAG-HEVMAFNS-IGVADVTGVELMDSLPLVSRADPHNLPFFD-EAFDVAFTAH 156 (229)
Q Consensus 95 ~~~~~vLDiG~G~G-~~~~~l~~-~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~-~~fD~V~~~~ 156 (229)
.++.+|||||||+| ..+..|++ .|+ +|+++|+++..+.++..|+.+....- ..||+|.+..
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsir 97 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIR 97 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEES
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccceEEccCCCCcccccCCcCEEEEcC
Confidence 66789999999999 59999998 688 99999999999999999998843211 4899998743
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.50 E-value=6.1e-07 Score=84.21 Aligned_cols=116 Identities=9% Similarity=0.053 Sum_probs=77.6
Q ss_pred HhcccCCCCCeEEEEcCCCChhhHHHHhCC-------------------------------------------CCeEEEe
Q 027039 89 QGKSLLFNHSKVLCVSAGAGHEVMAFNSIG-------------------------------------------VADVTGV 125 (229)
Q Consensus 89 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~g-------------------------------------------~~~v~~v 125 (229)
+.....+++..+||.+||+|.+++..+..+ ...++|+
T Consensus 183 l~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~ 262 (703)
T 3v97_A 183 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGS 262 (703)
T ss_dssp HHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEE
Confidence 333455788999999999999998876531 1379999
Q ss_pred cCCCCC----------------CeEEEcCCCCC--CCCCCceeEEEcc--cchhh---hCHHH---HHHHHHhccccCcE
Q 027039 126 ELMDSL----------------PLVSRADPHNL--PFFDEAFDVAFTA--HLAEA---LFPSR---FVGEMERTVKIGGV 179 (229)
Q Consensus 126 D~s~~~----------------~~~~~~d~~~~--~~~~~~fD~V~~~--~~~~~---~~~~~---~l~~~~~~LkpgG~ 179 (229)
|+++.+ +.+.++|+.++ |..+++||+|++| +-... ....+ .+.++.+.+.|||.
T Consensus 263 Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~ 342 (703)
T 3v97_A 263 DSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWN 342 (703)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCe
Confidence 999872 46899999886 4434589999998 21111 11233 34555555668999
Q ss_pred EEEEeecCCcccHHHHHHHHhcCceeEeeeeeec
Q 027039 180 CMVLMEECAGREIKQIVELFRTSRFVDAANVTVN 213 (229)
Q Consensus 180 lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 213 (229)
++++++. .++.+..++...+....+
T Consensus 343 ~~ilt~~---------~~l~~~~glk~~k~~~l~ 367 (703)
T 3v97_A 343 LSLFSAS---------PDLLSCLQLRADKQYKAK 367 (703)
T ss_dssp EEEEESC---------HHHHHTTCCCEEEEEEEE
T ss_pred EEEEeCC---------HHHHHHhCCCcccceeee
Confidence 9988886 334455555555555443
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.47 E-value=5.2e-07 Score=74.24 Aligned_cols=64 Identities=16% Similarity=0.089 Sum_probs=50.3
Q ss_pred ccCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCCCCCCc-eeEEEcc
Q 027039 92 SLLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPFFDEA-FDVAFTA 155 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~~-fD~V~~~ 155 (229)
....++.+|||||||+|.++..+++.|..+|+|+|+++. .+.++++|+.++++++.. ...|++|
T Consensus 27 ~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~N 102 (249)
T 3ftd_A 27 LNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGN 102 (249)
T ss_dssp TTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEE
T ss_pred cCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEE
Confidence 345688999999999999999999997569999999975 246889999998875421 2255554
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.42 E-value=7.1e-08 Score=84.20 Aligned_cols=85 Identities=18% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCCC------------------------------CeEEEcCCCCCC-
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDSL------------------------------PLVSRADPHNLP- 143 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~~------------------------------~~~~~~d~~~~~- 143 (229)
++.+|||+|||+|..+..++.. |..+|+++|+++.. +.++++|+.+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6889999999999999999987 65689999999761 446677765532
Q ss_pred CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 144 FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 144 ~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...++||+|+.+-.. .+.+++..+.+.|||||.+++.
T Consensus 127 ~~~~~fD~I~lDP~~---~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG---SPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HSTTCEEEEEECCSS---CCHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC---CHHHHHHHHHHhcCCCCEEEEE
Confidence 113579999975322 2468899999999999987654
No 273
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.42 E-value=1.4e-06 Score=79.44 Aligned_cols=133 Identities=12% Similarity=0.087 Sum_probs=85.7
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhC----C---------------CCeEEEecCCCC---------------C-----CeE
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSI----G---------------VADVTGVELMDS---------------L-----PLV 134 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~----g---------------~~~v~~vD~s~~---------------~-----~~~ 134 (229)
..++.+|+|.|||+|.+...+++. + ...++|+|+++. . ..+
T Consensus 167 p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 167 PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAI 246 (541)
T ss_dssp CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSE
T ss_pred cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCe
Confidence 356789999999999998887643 1 137999999976 1 457
Q ss_pred EEcCCCCCC-CCCCceeEEEcccchhh--------------h-CHHHHHHHHHhccccCcEEEEEeecC---CcccHHHH
Q 027039 135 SRADPHNLP-FFDEAFDVAFTAHLAEA--------------L-FPSRFVGEMERTVKIGGVCMVLMEEC---AGREIKQI 195 (229)
Q Consensus 135 ~~~d~~~~~-~~~~~fD~V~~~~~~~~--------------~-~~~~~l~~~~~~LkpgG~lil~~~~~---~~~~~~~l 195 (229)
.++|....+ ...++||+|++|--... . ....+++.+.+.|||||++.++++.. .......+
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~~~i 326 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDI 326 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHHHHH
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHHHHH
Confidence 778876543 34578999999821110 0 12468999999999999999998763 22223445
Q ss_pred H-HHHhcCceeEeeeeee-----cCCeeEEEEEEecc
Q 027039 196 V-ELFRTSRFVDAANVTV-----NGSNMTRILMRRTR 226 (229)
Q Consensus 196 ~-~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 226 (229)
. .+.++..+..+..+.. .|-...++++++++
T Consensus 327 R~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~ 363 (541)
T 2ar0_A 327 RRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGT 363 (541)
T ss_dssp HHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBC
T ss_pred HHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCC
Confidence 3 3455555555554422 13333455555543
No 274
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.41 E-value=2.7e-06 Score=70.94 Aligned_cols=96 Identities=19% Similarity=0.162 Sum_probs=69.2
Q ss_pred HHhcccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------CCeEEEc-CCCCCCCCCCceeE
Q 027039 88 LQGKSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------LPLVSRA-DPHNLPFFDEAFDV 151 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------~~~~~~~-d~~~~~~~~~~fD~ 151 (229)
+.+...++++.+|||+||++|.++...+.. |...|.|+|+... .+.++++ |+..++. ..+|+
T Consensus 86 i~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 86 LVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSE
T ss_pred HHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCE
Confidence 334456789999999999999999988777 8878999999866 2236665 7766653 67999
Q ss_pred EEcccchhhh-CH-------HHHHHHHHhccccC-cEEEEEeec
Q 027039 152 AFTAHLAEAL-FP-------SRFVGEMERTVKIG-GVCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~~~~-~~-------~~~l~~~~~~Lkpg-G~lil~~~~ 186 (229)
|+|. +.+.. +| ..+|+-+.+.|++| |.+++=+-+
T Consensus 164 ivcD-igeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 164 LLCD-IGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp EEEC-CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEE-CccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 9995 22222 22 23566667889988 877665544
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.39 E-value=1e-07 Score=83.54 Aligned_cols=87 Identities=14% Similarity=0.111 Sum_probs=67.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCC---------------C--CeEEEcCCCCCC--CCCCceeEEE
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDS---------------L--PLVSRADPHNLP--FFDEAFDVAF 153 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~---------------~--~~~~~~d~~~~~--~~~~~fD~V~ 153 (229)
+++.+|||++||+|.+++.++.. |..+|+++|+++. . +.++++|+.+.. -..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46889999999999999999885 5569999999976 1 667788875531 1246899999
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
++-.. .+.+++..+.+.|+|||.+++..
T Consensus 131 lDP~g---~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDPFG---TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECCSS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCc---CHHHHHHHHHHHhCCCCEEEEEe
Confidence 86521 24578999999999999776543
No 276
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.38 E-value=3.4e-06 Score=68.23 Aligned_cols=92 Identities=17% Similarity=0.235 Sum_probs=66.9
Q ss_pred cccCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------CCeEEEc-CCCCCCCCCCceeEEEc
Q 027039 91 KSLLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------LPLVSRA-DPHNLPFFDEAFDVAFT 154 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------~~~~~~~-d~~~~~~~~~~fD~V~~ 154 (229)
.-.++++.+|+|+||++|.++...+.. |...|.|+|+... .+.|+++ |+..++ ..++|.|+|
T Consensus 73 k~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~Dtllc 150 (267)
T 3p8z_A 73 RNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLC 150 (267)
T ss_dssp TTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEE
T ss_pred hcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEE
Confidence 336689999999999999999988877 8779999999865 3448887 876654 367999999
Q ss_pred ccchhhh-CH-------HHHHHHHHhccccCcEEEEEeec
Q 027039 155 AHLAEAL-FP-------SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 155 ~~~~~~~-~~-------~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
. +.+.. +| .++++-+.+.|++ |.+++=+-+
T Consensus 151 D-IgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~ 188 (267)
T 3p8z_A 151 D-IGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLN 188 (267)
T ss_dssp C-CCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESC
T ss_pred e-cCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEcc
Confidence 5 22211 22 2356667788998 665554444
No 277
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.33 E-value=2.1e-06 Score=74.71 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=63.4
Q ss_pred CCeEEEEcCCCChhhHHHH--------hC--------CCCeEEEecCCCCC--------C-------------------e
Q 027039 97 HSKVLCVSAGAGHEVMAFN--------SI--------GVADVTGVELMDSL--------P-------------------L 133 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~--------~~--------g~~~v~~vD~s~~~--------~-------------------~ 133 (229)
..+|+|+|||+|..+..+. +. +.-+|..-|+.... . -
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999888762 11 22367777765442 1 1
Q ss_pred EE---EcCCCCCCCCCCceeEEEcccchhhhC--H-------------------------------------HHHHHHHH
Q 027039 134 VS---RADPHNLPFFDEAFDVAFTAHLAEALF--P-------------------------------------SRFVGEME 171 (229)
Q Consensus 134 ~~---~~d~~~~~~~~~~fD~V~~~~~~~~~~--~-------------------------------------~~~l~~~~ 171 (229)
|+ -+......|++++||+|+++...|.+. | ..+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 223344558899999999996555441 2 23578889
Q ss_pred hccccCcEEEEEeecCC
Q 027039 172 RTVKIGGVCMVLMEECA 188 (229)
Q Consensus 172 ~~LkpgG~lil~~~~~~ 188 (229)
+.|+|||++++.+...+
T Consensus 213 ~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHEEEEEEEEEEEEECC
T ss_pred HHhCCCCEEEEEEecCC
Confidence 99999999998887654
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.31 E-value=4e-06 Score=78.90 Aligned_cols=118 Identities=14% Similarity=0.076 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C---CCeEEEecCCCCCCe---------------------EEEcCCCCC-CCCCCc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G---VADVTGVELMDSLPL---------------------VSRADPHNL-PFFDEA 148 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g---~~~v~~vD~s~~~~~---------------------~~~~d~~~~-~~~~~~ 148 (229)
.++.+|||.|||+|.+..+++.. + ..+++|+|+++..+. +...|..+. +...++
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 46889999999999999998876 3 247999999987322 222233221 223578
Q ss_pred eeEEEcc--cchhhh---------------------------C-HHHHHHHHHhccccCcEEEEEeecCC----cccHHH
Q 027039 149 FDVAFTA--HLAEAL---------------------------F-PSRFVGEMERTVKIGGVCMVLMEECA----GREIKQ 194 (229)
Q Consensus 149 fD~V~~~--~~~~~~---------------------------~-~~~~l~~~~~~LkpgG~lil~~~~~~----~~~~~~ 194 (229)
||+|++| +..... + ...+++.+.+.|||||++.++++..- ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 9999998 211000 0 23478889999999999999998732 112445
Q ss_pred HHH-HHhcCceeEeeeeee
Q 027039 195 IVE-LFRTSRFVDAANVTV 212 (229)
Q Consensus 195 l~~-l~~~~~~~~~~~~~~ 212 (229)
+.+ +.++..+..+.++..
T Consensus 480 LRk~LLe~~~I~aIIdLP~ 498 (878)
T 3s1s_A 480 FREFLVGNFGLEHIFLYPR 498 (878)
T ss_dssp HHHHHTTTTCEEEEEECCB
T ss_pred HHHHHHhCCCeEEEEECCC
Confidence 554 466778887777644
No 279
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.29 E-value=8.4e-08 Score=79.46 Aligned_cols=61 Identities=20% Similarity=0.292 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCC-------C----------------CCeEEEcCCCCC-C-CCC--C
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD-------S----------------LPLVSRADPHNL-P-FFD--E 147 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~-------~----------------~~~~~~~d~~~~-~-~~~--~ 147 (229)
.++.+|||+|||+|..+..++..+. +|+|+|+++ . .+.++++|+.+. + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 5678999999999999999999875 999999999 3 266889998873 3 444 7
Q ss_pred ceeEEEccc
Q 027039 148 AFDVAFTAH 156 (229)
Q Consensus 148 ~fD~V~~~~ 156 (229)
+||+|+++-
T Consensus 161 ~fD~V~~dP 169 (258)
T 2r6z_A 161 KPDIVYLDP 169 (258)
T ss_dssp CCSEEEECC
T ss_pred CccEEEECC
Confidence 899999973
No 280
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.28 E-value=4.9e-07 Score=83.48 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCChhhHH---HHhCCCC--eEEEecCCCC---------------CCeEEEcCCCCCCCCCCceeEEEcc
Q 027039 96 NHSKVLCVSAGAGHEVMA---FNSIGVA--DVTGVELMDS---------------LPLVSRADPHNLPFFDEAFDVAFTA 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~---l~~~g~~--~v~~vD~s~~---------------~~~~~~~d~~~~~~~~~~fD~V~~~ 155 (229)
.+..|||||||+|.+... .++.+.. +|+|+|.++. .+.++++|++++..+ +++|+|++=
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 345799999999988433 3333222 6899999875 466999999998765 689999996
Q ss_pred cc----hhhhCHHHHHHHHHhccccCcEEE
Q 027039 156 HL----AEALFPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 156 ~~----~~~~~~~~~l~~~~~~LkpgG~li 181 (229)
-+ ..+..+ +.+....|.|||||.++
T Consensus 436 wMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 22 222234 67888889999999743
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.25 E-value=6.1e-07 Score=75.10 Aligned_cols=63 Identities=13% Similarity=0.004 Sum_probs=49.2
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCC---CeEEEecCCCC-----------CCeEEEcCCCCCCCCCC------ceeEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGV---ADVTGVELMDS-----------LPLVSRADPHNLPFFDE------AFDVA 152 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~---~~v~~vD~s~~-----------~~~~~~~d~~~~~~~~~------~fD~V 152 (229)
.+.++.+|||||||+|.++..+++.+. ++|+|+|+++. .+.++++|+.++++++- ..+.|
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~~v 118 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSIARPGDEPSLRI 118 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCSSSSCCEEE
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHhcccccCCceEE
Confidence 457889999999999999999998843 23999999976 35689999999876431 23456
Q ss_pred Ecc
Q 027039 153 FTA 155 (229)
Q Consensus 153 ~~~ 155 (229)
++|
T Consensus 119 v~N 121 (279)
T 3uzu_A 119 IGN 121 (279)
T ss_dssp EEE
T ss_pred EEc
Confidence 665
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.21 E-value=6.3e-07 Score=73.91 Aligned_cols=60 Identities=12% Similarity=-0.024 Sum_probs=46.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCe--EEEecCCCC-------------CCeEEEcCCCCCCCCC-----CceeEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVAD--VTGVELMDS-------------LPLVSRADPHNLPFFD-----EAFDVA 152 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~--v~~vD~s~~-------------~~~~~~~d~~~~~~~~-----~~fD~V 152 (229)
.+.++.+|||||||+|.++. +.. + .+ |+|+|+++. .+.++++|+.++++++ +..|.|
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRV 94 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEE
T ss_pred CCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEE
Confidence 45788999999999999999 754 3 36 999999965 2458899998877543 234678
Q ss_pred Ecc
Q 027039 153 FTA 155 (229)
Q Consensus 153 ~~~ 155 (229)
++|
T Consensus 95 vsN 97 (252)
T 1qyr_A 95 FGN 97 (252)
T ss_dssp EEE
T ss_pred EEC
Confidence 887
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.20 E-value=8.3e-06 Score=74.33 Aligned_cols=129 Identities=12% Similarity=0.034 Sum_probs=82.7
Q ss_pred CeEEEEcCCCChhhHHHHhC--------C--------CCeEEEecCCCCCC--------------eE--EEcCCCCCC-C
Q 027039 98 SKVLCVSAGAGHEVMAFNSI--------G--------VADVTGVELMDSLP--------------LV--SRADPHNLP-F 144 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~~--------g--------~~~v~~vD~s~~~~--------------~~--~~~d~~~~~-~ 144 (229)
.+|+|.+||+|.+.....+. + ...++|+|+++.+. .+ .++|....+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 39999999999988776432 0 24899999998621 12 566655443 4
Q ss_pred CCCceeEEEcc--cchh---------------h--------h-----CHHHHHHHHHhccccCcEEEEEeecC---Cc-c
Q 027039 145 FDEAFDVAFTA--HLAE---------------A--------L-----FPSRFVGEMERTVKIGGVCMVLMEEC---AG-R 190 (229)
Q Consensus 145 ~~~~fD~V~~~--~~~~---------------~--------~-----~~~~~l~~~~~~LkpgG~lil~~~~~---~~-~ 190 (229)
.+.+||+|++| +... . . .-..+++.+.+.|||||++.++++.. .. .
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~ 405 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTN 405 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCCGG
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcCcc
Confidence 56899999998 1110 0 1 01368999999999999999998762 12 2
Q ss_pred cHHHHHH-HHhcCceeEeeeeee-----cCCeeEEEEEEecc
Q 027039 191 EIKQIVE-LFRTSRFVDAANVTV-----NGSNMTRILMRRTR 226 (229)
Q Consensus 191 ~~~~l~~-l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 226 (229)
....+.+ +..+..+..+..+.. .+-..-++++++++
T Consensus 406 ~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 406 NEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDK 447 (544)
T ss_dssp GHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCC
T ss_pred hHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCC
Confidence 3345554 566777777766532 23333445555543
No 284
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.17 E-value=8.8e-07 Score=77.22 Aligned_cols=93 Identities=13% Similarity=0.057 Sum_probs=63.9
Q ss_pred CCeEEEEcCCCChhhHHHHhC------------------CCCeEEEecCCCC------------------------CCeE
Q 027039 97 HSKVLCVSAGAGHEVMAFNSI------------------GVADVTGVELMDS------------------------LPLV 134 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~------------------g~~~v~~vD~s~~------------------------~~~~ 134 (229)
..+|+|+||++|..+..+... +.-+|..-|+... ..-|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 578999999999888876433 2225666776632 1235
Q ss_pred EEcCCCC---CCCCCCceeEEEcccchhhh-C-H--------------------------------------HHHHHHHH
Q 027039 135 SRADPHN---LPFFDEAFDVAFTAHLAEAL-F-P--------------------------------------SRFVGEME 171 (229)
Q Consensus 135 ~~~d~~~---~~~~~~~fD~V~~~~~~~~~-~-~--------------------------------------~~~l~~~~ 171 (229)
+.+.... ..|+++++|+|++++..|.+ + | ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444 56889999999999655554 2 2 11256668
Q ss_pred hccccCcEEEEEeecCCc
Q 027039 172 RTVKIGGVCMVLMEECAG 189 (229)
Q Consensus 172 ~~LkpgG~lil~~~~~~~ 189 (229)
+.|+|||++++.+...+.
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 213 EELISRGRMLLTFICKED 230 (384)
T ss_dssp HHEEEEEEEEEEEECCCT
T ss_pred HHhccCCeEEEEEecCCC
Confidence 999999999988876543
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.15 E-value=3.7e-07 Score=84.64 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCChhhHHH--HhC--C----------CCeEEEecCCCC---------------CCeEEEcCCCCCCCC--
Q 027039 97 HSKVLCVSAGAGHEVMAF--NSI--G----------VADVTGVELMDS---------------LPLVSRADPHNLPFF-- 145 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l--~~~--g----------~~~v~~vD~s~~---------------~~~~~~~d~~~~~~~-- 145 (229)
+..|||||||+|.++... |.. + ..+|+|+|.++. .+.++++|++++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 457999999999996432 111 1 239999999864 477999999997653
Q ss_pred ---CCceeEEEcccchhhh---CHHHHHHHHHhccccCcEEE
Q 027039 146 ---DEAFDVAFTAHLAEAL---FPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 146 ---~~~fD~V~~~~~~~~~---~~~~~l~~~~~~LkpgG~li 181 (229)
.+++|+|++--+.... -..+++..+.+.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5799999996333222 23467888889999999743
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.14 E-value=3.9e-07 Score=75.43 Aligned_cols=84 Identities=17% Similarity=0.118 Sum_probs=58.7
Q ss_pred CCCC--CeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------------------CCeEEEcCCCC-CCCCC
Q 027039 94 LFNH--SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------------------LPLVSRADPHN-LPFFD 146 (229)
Q Consensus 94 ~~~~--~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------------------~~~~~~~d~~~-~~~~~ 146 (229)
++++ .+|||+|||+|..+..++..|. +|+++|+++. .++++++|..+ ++...
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 3566 8999999999999999999976 8999999983 24588888776 33223
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCc
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGG 178 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG 178 (229)
++||+|+++-...+.....++++..+.+++.+
T Consensus 163 ~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp SCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred ccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 47999999744433322355666667776655
No 287
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.12 E-value=2.7e-05 Score=70.91 Aligned_cols=116 Identities=17% Similarity=0.115 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC----CCCeEEEecCCCC-----------------CCeEEEcCCCCC--C-CCCCcee
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI----GVADVTGVELMDS-----------------LPLVSRADPHNL--P-FFDEAFD 150 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~----g~~~v~~vD~s~~-----------------~~~~~~~d~~~~--~-~~~~~fD 150 (229)
.++.+|+|.+||+|.+...+.+. +...++|+|+++. ...+.++|.... | ....+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 46789999999999988877654 3458999999976 124778887765 4 4567999
Q ss_pred EEEcc--cch-h--------------h--h-----CHHHHHHHHHhccc-cCcEEEEEeecC---CcccHHHHHH-HHhc
Q 027039 151 VAFTA--HLA-E--------------A--L-----FPSRFVGEMERTVK-IGGVCMVLMEEC---AGREIKQIVE-LFRT 201 (229)
Q Consensus 151 ~V~~~--~~~-~--------------~--~-----~~~~~l~~~~~~Lk-pgG~lil~~~~~---~~~~~~~l~~-l~~~ 201 (229)
+|++| +.. + . . .-..+++.+.+.|| |||++.++++.. .......+.+ +..+
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~ 379 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEE 379 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHT
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhC
Confidence 99998 110 0 0 0 01358999999999 999999898873 2222344444 4667
Q ss_pred CceeEeeee
Q 027039 202 SRFVDAANV 210 (229)
Q Consensus 202 ~~~~~~~~~ 210 (229)
..+..+..+
T Consensus 380 ~~l~~II~L 388 (542)
T 3lkd_A 380 GAIDTVIGL 388 (542)
T ss_dssp TCEEEEEEC
T ss_pred CceeEEEEc
Confidence 777767665
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.08 E-value=9.5e-07 Score=74.71 Aligned_cols=63 Identities=11% Similarity=0.045 Sum_probs=50.8
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------------CCeEEEcCCCCCC--CC---CCceeEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------------LPLVSRADPHNLP--FF---DEAFDVA 152 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------------~~~~~~~d~~~~~--~~---~~~fD~V 152 (229)
.++++.+|||+|||+|..+..+++. +.++|+|+|+++. .+.++++|+.+++ +. .++||.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 3468899999999999999999987 4569999999976 2458889988764 11 1589999
Q ss_pred Ecc
Q 027039 153 FTA 155 (229)
Q Consensus 153 ~~~ 155 (229)
+++
T Consensus 103 l~D 105 (301)
T 1m6y_A 103 LMD 105 (301)
T ss_dssp EEE
T ss_pred EEc
Confidence 975
No 289
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.04 E-value=5.6e-06 Score=71.62 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=67.5
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC---------------------CCeEEEcCCCCCC-CCCCce
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS---------------------LPLVSRADPHNLP-FFDEAF 149 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~---------------------~~~~~~~d~~~~~-~~~~~f 149 (229)
..++|.+|||+++|+|.-+.++++. ..+.+++.|+++. .+.+...|...++ ...+.|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 4578999999999999999999988 4458999999975 1235556666543 345789
Q ss_pred eEEEcccc------h---------hhhC----------HHHHHHHHHhccccCcEEEEEeec
Q 027039 150 DVAFTAHL------A---------EALF----------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 150 D~V~~~~~------~---------~~~~----------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
|.|++..- . +... ..+++..+.+.|||||+++-.|-.
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 99997510 0 0001 146788899999999997755544
No 290
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.99 E-value=5.1e-06 Score=73.04 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCCC-CC-CCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHNL-PF-FDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~-~~-~~~~fD~V~~~ 155 (229)
.++.+|||+|||+|..+..++..+. +|+++|+++. .+.++++|+.+. +. ++++||+|+++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4689999999999999999998865 9999999976 145888888873 32 24689999997
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.96 E-value=9.2e-05 Score=61.78 Aligned_cols=127 Identities=13% Similarity=0.146 Sum_probs=80.2
Q ss_pred hhhhHHHHHHHHHh-cccCCCCCeEEEEcC------CCChhhHHHHhC-CC-CeEEEecCCCCC---CeEEEcCCCCCCC
Q 027039 77 QVTSYAHFFKHLQG-KSLLFNHSKVLCVSA------GAGHEVMAFNSI-GV-ADVTGVELMDSL---PLVSRADPHNLPF 144 (229)
Q Consensus 77 ~~~~~~~~~~~l~~-~~~~~~~~~vLDiG~------G~G~~~~~l~~~-g~-~~v~~vD~s~~~---~~~~~~d~~~~~~ 144 (229)
.+.-|.++.+.+.. ......+++|||+|+ -+|. ..+++. +. +.++++|+.+-. ..++++|......
T Consensus 89 nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~ 166 (344)
T 3r24_A 89 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHT 166 (344)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGEEE
T ss_pred eHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCCCeEEEcccccccc
Confidence 34456666666622 234577999999997 3455 333444 33 499999998752 3468999766443
Q ss_pred CCCceeEEEcc---cchhh--------hCH-HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 145 FDEAFDVAFTA---HLAEA--------LFP-SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 145 ~~~~fD~V~~~---~~~~~--------~~~-~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
.++||+|+|. ....+ ... +.++.-+.+.|+|||.|++=+-+... .+.+.++.+ .|..++-+
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg--~~~L~~lrk--~F~~VK~f 239 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--NADLYKLMG--HFSWWTAF 239 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--CHHHHHHHT--TEEEEEEE
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC--HHHHHHHHh--hCCeEEEE
Confidence 4889999996 11111 123 45566677899999998866655444 345666654 45544444
No 292
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.96 E-value=7.9e-06 Score=70.58 Aligned_cols=95 Identities=9% Similarity=-0.013 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-----------------CCCeEEEecCCCCC----------------CeEEEc---C
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-----------------GVADVTGVELMDSL----------------PLVSRA---D 138 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-----------------g~~~v~~vD~s~~~----------------~~~~~~---d 138 (229)
....+|+|+||++|..+..+... +.-+|+..|+.... .-|+.+ .
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999877765332 22367777876551 123343 3
Q ss_pred CCCCCCCCCceeEEEcccchhhh-C-H--------------------------------HHHHHHHHhccccCcEEEEEe
Q 027039 139 PHNLPFFDEAFDVAFTAHLAEAL-F-P--------------------------------SRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 139 ~~~~~~~~~~fD~V~~~~~~~~~-~-~--------------------------------~~~l~~~~~~LkpgG~lil~~ 184 (229)
+....|+++++|+|+++...|.+ . | ..+|+..++.|+|||++++.+
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 44467899999999999555444 2 1 235888899999999999888
Q ss_pred ecCCc
Q 027039 185 EECAG 189 (229)
Q Consensus 185 ~~~~~ 189 (229)
...+.
T Consensus 210 ~gr~~ 214 (359)
T 1m6e_X 210 LGRRS 214 (359)
T ss_dssp EECSS
T ss_pred ecCCC
Confidence 76543
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.85 E-value=6.1e-05 Score=59.86 Aligned_cols=81 Identities=12% Similarity=-0.056 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------C-----CeEEEcCCCCC--------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------L-----PLVSRADPHNL-------------- 142 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~-----~~~~~~d~~~~-------------- 142 (229)
.+..+|||+||| .-+..+++...++|+++|.+++ . ++++.+|+.+.
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred hCCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 467899999984 7777777763469999999876 2 45788886542
Q ss_pred -C--------C-CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEE
Q 027039 143 -P--------F-FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 143 -~--------~-~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~li 181 (229)
+ . ..++||+|+...-. ....+..+.+.|+|||.++
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k----~~~~~~~~l~~l~~GG~Iv 151 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF----RVGCALATAFSITRPVTLL 151 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS----HHHHHHHHHHHCSSCEEEE
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC----chhHHHHHHHhcCCCeEEE
Confidence 1 1 23789999986421 2355666779999999964
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.60 E-value=4.7e-05 Score=66.01 Aligned_cols=91 Identities=18% Similarity=0.109 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCC-----------------------eEEEcCCCCC----CCCCC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLP-----------------------LVSRADPHNL----PFFDE 147 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~-----------------------~~~~~d~~~~----~~~~~ 147 (229)
.++.+||-||.|.|..+.++.+.+..+|+.+|+++..+ +++.+|+... +-..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 45689999999999999999887657999999998732 2334443321 11245
Q ss_pred ceeEEEcccch-----------hhhCHHHHHHHHHhccccCcEEEEEee
Q 027039 148 AFDVAFTAHLA-----------EALFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 148 ~fD~V~~~~~~-----------~~~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+||+|+..... ..++-.++++.+.+.|+|||.++....
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 79999986221 122346789999999999999775443
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.51 E-value=0.00021 Score=59.72 Aligned_cols=86 Identities=10% Similarity=-0.021 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC------CCCeEEEecCCC---------------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI------GVADVTGVELMD--------------------------------------- 129 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~------g~~~v~~vD~s~--------------------------------------- 129 (229)
.....|||+|+..|..+..++.. +.++++++|..+
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 45779999999999988887643 256899999642
Q ss_pred ----CCCeEEEcCCCC-CC-CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEE
Q 027039 130 ----SLPLVSRADPHN-LP-FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 130 ----~~~~~~~~d~~~-~~-~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~li 181 (229)
..+.++++|+.+ +| +++++||+|+... .........+..+.+.|+|||.++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D~y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-DLYESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-CSHHHHHHHHHHHGGGEEEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-CccccHHHHHHHHHhhcCCCEEEE
Confidence 235578888765 44 4457899999853 222234578899999999999844
No 296
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.48 E-value=0.0005 Score=57.96 Aligned_cols=123 Identities=12% Similarity=0.055 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCCChhhHHHH----h-CCCC--eEEEecCCCC-----------------------------CCeEEEcC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFN----S-IGVA--DVTGVELMDS-----------------------------LPLVSRAD 138 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~----~-~g~~--~v~~vD~s~~-----------------------------~~~~~~~d 138 (229)
++.-+|||+|-|+|....... + .+.. +++.+|..+- .+.+..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 445689999999998654321 1 2222 4566664321 01255677
Q ss_pred CCC-CC-CCCCceeEEEcccchhhhCH----HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee
Q 027039 139 PHN-LP-FFDEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 139 ~~~-~~-~~~~~fD~V~~~~~~~~~~~----~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
+.+ ++ +++.+||+|+...+.-..+| .++++.+++.++|||.++ +.... -.+.+-+...+|. +..+.+
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYtaa----g~VRR~L~~aGF~-V~k~~G 247 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV--SYSSS----LSVRKSLLTLGFK-VGSSRE 247 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESCCC----HHHHHHHHHTTCE-EEEEEC
T ss_pred HHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE--EEeCc----HHHHHHHHHCCCE-EEecCC
Confidence 655 33 44568999999766555555 789999999999999955 33222 3567788888987 677889
Q ss_pred cCCeeEEEEEEe
Q 027039 213 NGSNMTRILMRR 224 (229)
Q Consensus 213 ~~~~~~~~~~~~ 224 (229)
+|.+..+++...
T Consensus 248 ~g~KReml~A~~ 259 (308)
T 3vyw_A 248 IGRKRKGTVASL 259 (308)
T ss_dssp C---CEEEEEES
T ss_pred CCCCCceeEEec
Confidence 988866666554
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.44 E-value=0.0015 Score=59.16 Aligned_cols=116 Identities=18% Similarity=0.212 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC----C----------CCeEEEecCCCC---------------CCeEEEcCCCCCCC-
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI----G----------VADVTGVELMDS---------------LPLVSRADPHNLPF- 144 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~----g----------~~~v~~vD~s~~---------------~~~~~~~d~~~~~~- 144 (229)
+++.+|+|-+||+|.+.....+. . ...++|+|+++. ...+..+|....|.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 56779999999999988766432 1 136999999876 23466677655442
Q ss_pred ---CCCceeEEEccc-ch------------hhh---C-HHHHHHHHHhccc-------cCcEEEEEeecC---CcccHHH
Q 027039 145 ---FDEAFDVAFTAH-LA------------EAL---F-PSRFVGEMERTVK-------IGGVCMVLMEEC---AGREIKQ 194 (229)
Q Consensus 145 ---~~~~fD~V~~~~-~~------------~~~---~-~~~~l~~~~~~Lk-------pgG~lil~~~~~---~~~~~~~ 194 (229)
...+||+|++|- +. ... + -..+++.+.+.|| |||++.++++.. .......
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~~~ 375 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISAR 375 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHHHH
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchHHH
Confidence 235799999981 10 000 1 1346777777776 799999998863 1212233
Q ss_pred HH-HHHhcCceeEeeee
Q 027039 195 IV-ELFRTSRFVDAANV 210 (229)
Q Consensus 195 l~-~l~~~~~~~~~~~~ 210 (229)
+. .+..++.+..|..+
T Consensus 376 iRk~Lle~~~l~aII~L 392 (530)
T 3ufb_A 376 IKEELLKNFNLHTIVRL 392 (530)
T ss_dssp HHHHHHHHSEEEEEEEC
T ss_pred HHHHHhhcCEEEEEEEC
Confidence 43 56778888888776
No 298
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.07 E-value=0.00039 Score=73.36 Aligned_cols=89 Identities=26% Similarity=0.225 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-C-----CCeEEEecCCCCCCe----------EEE--cCCCC-CCCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-G-----VADVTGVELMDSLPL----------VSR--ADPHN-LPFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g-----~~~v~~vD~s~~~~~----------~~~--~d~~~-~~~~~~~fD~V~~~ 155 (229)
.+..+|||||.|+|..+..+.+. + +.+++-+|+++...+ ... .|..+ .++...+||+|++.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 46789999999999776554332 1 457899999976431 111 13333 24456789999998
Q ss_pred cchhhh-CHHHHHHHHHhccccCcEEEEE
Q 027039 156 HLAEAL-FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 156 ~~~~~~-~~~~~l~~~~~~LkpgG~lil~ 183 (229)
++.+.. +..+.+.++.+.|||||++++.
T Consensus 1319 ~vl~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1319 CALATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp CC--------------------CCEEEEE
T ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEE
Confidence 887766 7888999999999999998765
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.88 E-value=0.0011 Score=55.22 Aligned_cols=62 Identities=11% Similarity=0.012 Sum_probs=49.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-----------CeEEEcCCCCCC-----CCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-----------PLVSRADPHNLP-----FFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-----------~~~~~~d~~~~~-----~~~~~fD~V~~~ 155 (229)
.++++..++|.+||.|..+..+++. .++|+|+|.++.+ +.+++++..+++ ...+++|.|+++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 4578899999999999999999998 4599999999853 457888877753 123579999864
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.63 E-value=0.0017 Score=54.31 Aligned_cols=38 Identities=32% Similarity=0.350 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL 133 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~ 133 (229)
.++..|||++||+|..+.+.+..|. +++|+|+++.+++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~ 271 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQ 271 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHH
Confidence 6889999999999999999999886 9999999987544
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.018 Score=49.30 Aligned_cols=96 Identities=15% Similarity=0.122 Sum_probs=62.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCC-----CCCC
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNL-----PFFD 146 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~-----~~~~ 146 (229)
..+..+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++..+-.++ ...+
T Consensus 177 ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~ 256 (371)
T 1f8f_A 177 TGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITD 256 (371)
T ss_dssp HHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcC
Confidence 3333343455678999999999886 7788888776 8767999998876322 222211111 0112
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+.+|+|+-..- ....+++..+.|++||+++++
T Consensus 257 gg~D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 257 GGVNFALESTG-----SPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp SCEEEEEECSC-----CHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCC-----CHHHHHHHHHHHhcCCEEEEe
Confidence 37999986321 134678889999999998754
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.55 E-value=0.0085 Score=49.80 Aligned_cols=108 Identities=14% Similarity=-0.018 Sum_probs=75.9
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-------------CCeEEEcCCCC-CC---CCCCceeEEEcccch
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-------------LPLVSRADPHN-LP---FFDEAFDVAFTAHLA 158 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~-~~---~~~~~fD~V~~~~~~ 158 (229)
.+..+||+=+|||..+++....+ .+++.+|.++. ...+++.|... +. -+..+||+|+..--.
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPY 169 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSY 169 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCC
T ss_pred cCCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCC
Confidence 45678999999999999988865 69999999876 23466667533 11 224579999997322
Q ss_pred hh-hCHHHHHHHHHh--ccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 159 EA-LFPSRFVGEMER--TVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 159 ~~-~~~~~~l~~~~~--~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
+. .+..++++.+.+ .+.|+|.+++..+-......+.+.+-+++.+.
T Consensus 170 e~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 170 ERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp CSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 21 235566666665 46799999999998776666677766665444
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.51 E-value=0.019 Score=49.79 Aligned_cols=91 Identities=20% Similarity=0.062 Sum_probs=61.2
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCC--------CeEEEcCCCCCCC---------CCCceeE
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSL--------PLVSRADPHNLPF---------FDEAFDV 151 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~--------~~~~~~d~~~~~~---------~~~~fD~ 151 (229)
...++++.+||-+|+|. |..+..+++. |..+|+++|.+++. .+++ |..+..+ ....+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCE
Confidence 45678999999999977 7888888876 87689999988652 2222 2222111 1236999
Q ss_pred EEcccchh---------hhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAE---------ALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~---------~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+-..-.. +..+...++++.+.|++||+++++
T Consensus 258 vid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 258 GVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 98642211 112345788899999999998744
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.86 E-value=0.029 Score=45.77 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL 131 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~ 131 (229)
..++..|||..||+|..+.+....|. +++|+|+++..
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~ 246 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEY 246 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHH
Confidence 37899999999999999999998876 99999998753
No 305
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.81 E-value=0.078 Score=44.17 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=59.0
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe--------EEEcCCCCCCCCCCceeE
Q 027039 82 AHFFKHLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL--------VSRADPHNLPFFDEAFDV 151 (229)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~--------~~~~d~~~~~~~~~~fD~ 151 (229)
...+..+ ....++++.+||-+|+|. |..+..+++. |. +|++++ +++..+ .+..|..++ .+.+|+
T Consensus 129 ~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v---~~g~Dv 202 (315)
T 3goh_A 129 LTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYREPSQV---TQKYFA 202 (315)
T ss_dssp HHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEESSGGGC---CSCEEE
T ss_pred HHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEcCHHHh---CCCccE
Confidence 3334444 556778999999999964 7778888877 88 999999 776322 111232222 568999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+-..-. ..+....+.|+|||+++++
T Consensus 203 v~d~~g~------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 203 IFDAVNS------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EECC-------------TTGGGEEEEEEEEEE
T ss_pred EEECCCc------hhHHHHHHHhcCCCEEEEE
Confidence 9863211 1235678899999998866
No 306
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.60 E-value=0.1 Score=44.66 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=60.7
Q ss_pred HHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcC--CCCC-----CCCCCce
Q 027039 88 LQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRAD--PHNL-----PFFDEAF 149 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d--~~~~-----~~~~~~f 149 (229)
+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++... ..++ ...++.+
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 44556678999999999875 7777777776 8778999999887332 22111 0111 0123478
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
|+|+-..- ....++...+.|++| |+++++
T Consensus 265 D~vid~~g-----~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIG-----NVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCC-----CHHHHHHHHHHhhccCCEEEEE
Confidence 99885321 234678889999997 998754
No 307
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.43 E-value=0.045 Score=46.95 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=38.7
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC------------CCeEEEcCCCCC
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS------------LPLVSRADPHNL 142 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~------------~~~~~~~d~~~~ 142 (229)
++..|||||.|.|.++..|.+. ...+|+++|+++. .+.++++|+..+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccch
Confidence 4689999999999999999986 3458999999854 456888898654
No 308
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.41 E-value=0.11 Score=44.46 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=59.9
Q ss_pred hcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCC-----C---CCCCcee
Q 027039 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNL-----P---FFDEAFD 150 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~-----~---~~~~~fD 150 (229)
....++++.+||-+|+|. |..+..+++. |..+|+++|.++...+ ++..+-.++ . ..++.+|
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCC
Confidence 345678999999999876 7777777776 8778999998876221 221111111 0 2234799
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|+-..- ....++.+.+.|++||+++++
T Consensus 256 vvid~~G-----~~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 256 VVIECAG-----VAETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEECSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCC-----CHHHHHHHHHHhccCCEEEEE
Confidence 9986321 134678889999999998854
No 309
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.25 E-value=0.14 Score=43.05 Aligned_cols=92 Identities=14% Similarity=0.112 Sum_probs=58.9
Q ss_pred HHHHHhcccCCCCCeEEEEcCCC--ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCC
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAGA--GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFD 146 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G~--G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~ 146 (229)
...+.....++++.+||-+|+|+ |..+..++.. |. +|+++|.+++..+. ...|..+.. ...
T Consensus 133 ~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 133 WVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp HHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCC
Confidence 33444556789999999999984 6777777766 87 99999988773321 011222111 123
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..+|+|+.+.-.. ...+..+.|++||+++++
T Consensus 212 ~g~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 212 IGADAAIDSIGGP------DGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp SCEEEEEESSCHH------HHHHHHHTEEEEEEEEEC
T ss_pred CCCcEEEECCCCh------hHHHHHHHhcCCCEEEEE
Confidence 4799998743221 123345899999998855
No 310
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.14 E-value=0.062 Score=46.40 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=61.9
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCC--------CeEEEcCCCC-CC------CCCCceeEEE
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSL--------PLVSRADPHN-LP------FFDEAFDVAF 153 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~--------~~~~~~d~~~-~~------~~~~~fD~V~ 153 (229)
...++++.+||-+|+|. |..+..+++. |..+|+++|.+++. .+.+..+-.+ +. .....+|+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvi 259 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAV 259 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEE
Confidence 34678999999999876 7788888876 87689999988762 2222211111 00 0123699999
Q ss_pred cccc----------hhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 154 TAHL----------AEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~----------~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
-..- .++..+...+++..+.|++||+++++
T Consensus 260 d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 260 DAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp ECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 6521 12224556789999999999998744
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.13 E-value=0.041 Score=46.60 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=57.3
Q ss_pred ccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe--------EEEcCCCCCCCCCCceeEEEcccchhhh
Q 027039 92 SLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL--------VSRADPHNLPFFDEAFDVAFTAHLAEAL 161 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~--------~~~~d~~~~~~~~~~fD~V~~~~~~~~~ 161 (229)
..++++.+||-+|+|. |..+..+++. |. +|+++|.+++..+ .+..+...+ ...+|+|+-..-.
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~D~vid~~g~--- 244 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFYTDPKQC---KEELDFIISTIPT--- 244 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEESSGGGC---CSCEEEEEECCCS---
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeecCCHHHH---hcCCCEEEECCCc---
Confidence 3678999999999876 7777777776 87 9999999887432 111222222 2279999853211
Q ss_pred CHHHHHHHHHhccccCcEEEEE
Q 027039 162 FPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...++...+.|+|||+++++
T Consensus 245 --~~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 --HYDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp --CCCHHHHHTTEEEEEEEEEC
T ss_pred --HHHHHHHHHHHhcCCEEEEE
Confidence 12466788999999998855
No 312
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.01 E-value=0.25 Score=42.68 Aligned_cols=87 Identities=15% Similarity=0.128 Sum_probs=54.0
Q ss_pred cCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~fD~V~~~ 155 (229)
.++++.+||-+|+|. |..+..+++. |..+|+++|.++...+ ++..+-.++. .....+|+|+-.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 578999999999875 6777777776 8779999998876322 2211111110 112369998853
Q ss_pred cchhhhCHHHHHHHHHhcc----ccCcEEEEE
Q 027039 156 HLAEALFPSRFVGEMERTV----KIGGVCMVL 183 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~L----kpgG~lil~ 183 (229)
. .. +...+..+.+.| ++||+++++
T Consensus 290 ~-g~---~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 290 T-GV---PQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp S-SC---HHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred C-CC---cHHHHHHHHHHHHhccCCCcEEEEe
Confidence 2 11 222344444444 999998854
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.89 E-value=0.058 Score=44.84 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred CCeEEEcCCCC-CC-CCCCceeEEEcc--cch---------------h---hh-CHHHHHHHHHhccccCcEEEEEeecC
Q 027039 131 LPLVSRADPHN-LP-FFDEAFDVAFTA--HLA---------------E---AL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 131 ~~~~~~~d~~~-~~-~~~~~fD~V~~~--~~~---------------~---~~-~~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
...++++|..+ ++ +++++||+|+++ +.. . .+ ...++++++.++|||||.+++.++..
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 34577888766 22 457899999998 210 0 11 13467889999999999999887642
Q ss_pred C------c----ccH-HHHHHHHhcCceeEee
Q 027039 188 A------G----REI-KQIVELFRTSRFVDAA 208 (229)
Q Consensus 188 ~------~----~~~-~~l~~l~~~~~~~~~~ 208 (229)
. + .+. ..+..++...+|.-..
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 1 0 111 3466677766654433
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.88 E-value=0.039 Score=46.99 Aligned_cols=88 Identities=16% Similarity=0.148 Sum_probs=57.4
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCC---CCC-----CCCCCceeE
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADP---HNL-----PFFDEAFDV 151 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~---~~~-----~~~~~~fD~ 151 (229)
...++++.+||-+|+|. |..+..++.. |..+|+++|.++...+ ++..+. .+. ...++.+|+
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCE
Confidence 44678999999999876 7777777775 7768999998876221 221110 000 000146899
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+-..- ....++...+.|+|||+++++
T Consensus 246 vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 246 TIECTG-----AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC-----ChHHHHHHHHHhcCCCEEEEE
Confidence 886321 124567888999999998754
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.64 E-value=0.067 Score=45.36 Aligned_cols=89 Identities=11% Similarity=-0.010 Sum_probs=59.3
Q ss_pred hcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCceeEE
Q 027039 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAFDVA 152 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~fD~V 152 (229)
....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++..+-.++. .....+|+|
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 445678999999999876 7778888877 7768999998876222 2211111110 122369999
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+-..- ....+++..+.|+|||+++++
T Consensus 240 ~d~~g-----~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 240 VIAGG-----DVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EECSS-----CTTHHHHHHHHEEEEEEEEEC
T ss_pred EECCC-----ChHHHHHHHHHHhcCCEEEEe
Confidence 85321 124577888999999998854
No 316
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.61 E-value=0.062 Score=45.96 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=61.0
Q ss_pred HHHHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCC--CCC-----CCCC
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADP--HNL-----PFFD 146 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~--~~~-----~~~~ 146 (229)
+..+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++..+- .++ ...+
T Consensus 180 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTT
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhC
Confidence 33344455678999999999875 7777777776 8768999998876332 221110 111 0112
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
+.+|+|+-..- ....++...+.|+++ |+++++
T Consensus 260 gg~Dvvid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 260 GGVDYAVECAG-----RIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SCBSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCCEEEECCC-----CHHHHHHHHHHHhcCCCEEEEE
Confidence 47899886321 134678888999999 998754
No 317
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.59 E-value=0.084 Score=45.14 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=59.6
Q ss_pred HHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCC----CC-----CCCCc
Q 027039 87 HLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHN----LP-----FFDEA 148 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~----~~-----~~~~~ 148 (229)
.+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..++ ...|..+ +. ..++.
T Consensus 183 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 183 AAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp HHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCC
Confidence 333445678999999999865 6777777766 76689999988773321 1112211 10 11236
Q ss_pred eeEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 149 FDVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 149 fD~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
+|+|+-..- ....++...+.|++| |+++++
T Consensus 263 ~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 263 VDFSLECVG-----NVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp BSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCC-----CHHHHHHHHHHhhcCCcEEEEE
Confidence 899886321 134678889999999 998754
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.51 E-value=0.081 Score=40.78 Aligned_cols=87 Identities=16% Similarity=0.118 Sum_probs=55.1
Q ss_pred hcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCe-------EEEcCCCCCC--------CCCCceeE
Q 027039 90 GKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPL-------VSRADPHNLP--------FFDEAFDV 151 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~-------~~~~d~~~~~--------~~~~~fD~ 151 (229)
....++++.+||..|++ .|.....++.. |. +|+++|.+++..+ -...|..+.. ...+.+|+
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeE
Confidence 34467899999999953 35555555554 86 8999998765221 0112322211 11246999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
++.+.- ...+++..+.|+|||+++++
T Consensus 111 vi~~~g------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 111 VLNSLA------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEECCC------THHHHHHHHTEEEEEEEEEC
T ss_pred EEECCc------hHHHHHHHHHhccCCEEEEE
Confidence 997532 24578888999999998754
No 319
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.51 E-value=0.086 Score=45.10 Aligned_cols=94 Identities=13% Similarity=0.209 Sum_probs=60.4
Q ss_pred HHHHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeEE-------EcCCCC--CC-------CCC
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLVS-------RADPHN--LP-------FFD 146 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~~-------~~d~~~--~~-------~~~ 146 (229)
+..+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..++. ..|..+ .. ..+
T Consensus 184 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 184 YGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp HHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHT
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhC
Confidence 33344455678999999999875 6777777776 776899999887733211 112111 00 012
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
+.+|+|+-..- ....++...+.|++| |+++++
T Consensus 264 ~g~Dvvid~~G-----~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 264 GGVDYSLDCAG-----TAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SCBSEEEESSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCccEEEECCC-----CHHHHHHHHHHhhcCCCEEEEE
Confidence 36898885321 134678889999999 998754
No 320
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=93.50 E-value=0.12 Score=42.75 Aligned_cols=52 Identities=17% Similarity=0.092 Sum_probs=32.3
Q ss_pred EcCCCCCCCCCCceeEEEcc----cchhh-------h-CHHHHHHHHHhccccCcEEEEEeecCC
Q 027039 136 RADPHNLPFFDEAFDVAFTA----HLAEA-------L-FPSRFVGEMERTVKIGGVCMVLMEECA 188 (229)
Q Consensus 136 ~~d~~~~~~~~~~fD~V~~~----~~~~~-------~-~~~~~l~~~~~~LkpgG~lil~~~~~~ 188 (229)
.+|+...+ ..+.+|+|+++ ...++ . ...-++..+.++|+|||.+++-+-..+
T Consensus 195 ~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 195 RLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred ccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 55555533 23679999998 12222 2 122256778899999999886555433
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.49 E-value=0.035 Score=46.88 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=58.6
Q ss_pred hcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC--C--CCCceeEEEc
Q 027039 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP--F--FDEAFDVAFT 154 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~--~--~~~~fD~V~~ 154 (229)
....++++.+||-+|+|. |..+..+++. |. +|+++|.+++..+ ++..+-.+.. . ..+.+|+|+-
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEE
Confidence 344678999999999986 8888888876 87 9999999876322 2211111110 0 0136888875
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
... ....++...+.|+|||+++++
T Consensus 239 ~~g-----~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 239 TAV-----SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred eCC-----CHHHHHHHHHHhccCCEEEEe
Confidence 321 234678888999999998854
No 322
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.30 E-value=0.082 Score=45.10 Aligned_cols=93 Identities=14% Similarity=0.007 Sum_probs=60.5
Q ss_pred HHHHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCC
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDE 147 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~ 147 (229)
+..+.....++++.+||-+|+|. |..+..+++. |. +|+++|.+++..+ ++..+..++. ....
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCC
Confidence 33343456678999999999876 7777777776 87 9999998865221 2221111110 1233
Q ss_pred ceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 148 AFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 148 ~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.+|+|+-..- ...+....+.|+|||+++++-
T Consensus 257 g~D~vid~~g------~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG------GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT------SSCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC------hHHHHHHHHHhhcCCEEEEEe
Confidence 7999986432 124667888999999988653
No 323
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.15 E-value=0.077 Score=45.37 Aligned_cols=92 Identities=14% Similarity=0.163 Sum_probs=59.5
Q ss_pred HHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCC----CC-----CCCCc
Q 027039 87 HLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHN----LP-----FFDEA 148 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~----~~-----~~~~~ 148 (229)
.+.....++++.+||-+|+|. |..+..++.. |..+|+++|.+++..++ ...|..+ +. ..++.
T Consensus 182 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp HHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCC
Confidence 344455678999999999875 6777777765 76689999988763321 0112111 10 11246
Q ss_pred eeEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 149 FDVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 149 fD~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
+|+|+-..- ....++...+.|++| |+++++
T Consensus 262 ~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 262 VDFSFEVIG-----RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp BSEEEECSC-----CHHHHHHHHHHBCTTTCEEEEC
T ss_pred CcEEEECCC-----CHHHHHHHHHHhhcCCcEEEEe
Confidence 899886321 134577888999999 998754
No 324
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.13 E-value=0.087 Score=44.98 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=60.0
Q ss_pred HHHhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCC----C-----CCCCCc
Q 027039 87 HLQGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHN----L-----PFFDEA 148 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~----~-----~~~~~~ 148 (229)
.+.....++++.+||-+|+|. |..+..+++. |..+|+++|.+++..++ ...|..+ + ...++.
T Consensus 181 ~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp HHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCC
Confidence 344455678999999999875 6777777776 87689999988773321 0112111 1 011236
Q ss_pred eeEEEcccchhhhCHHHHHHHHHhccccC-cEEEEE
Q 027039 149 FDVAFTAHLAEALFPSRFVGEMERTVKIG-GVCMVL 183 (229)
Q Consensus 149 fD~V~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lil~ 183 (229)
+|+|+-..- ....++...+.|+++ |+++++
T Consensus 261 ~D~vid~~g-----~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 261 VDYSFECIG-----NVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp BSEEEECSC-----CHHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCC-----cHHHHHHHHHhhccCCcEEEEE
Confidence 899886321 134578889999999 998754
No 325
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.70 E-value=0.28 Score=45.50 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-------------CCCeEEEecCCCC-------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-------------GVADVTGVELMDS------------------------------- 130 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-------------g~~~v~~vD~s~~------------------------------- 130 (229)
++.-+|+|+|.|+|.......+. ...+++.+|..|.
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 34568999999999877665432 1146888887553
Q ss_pred ------------CCeEEEcCCCC-CC-CC---CCceeEEEcccchhhhCH----HHHHHHHHhccccCcEEEEEeecCCc
Q 027039 131 ------------LPLVSRADPHN-LP-FF---DEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAG 189 (229)
Q Consensus 131 ------------~~~~~~~d~~~-~~-~~---~~~fD~V~~~~~~~~~~~----~~~l~~~~~~LkpgG~lil~~~~~~~ 189 (229)
.+++..+|+.+ ++ +. ++.+|.++...+.-..+| .+++..+.+.++|||.+. +....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~--t~~~~- 213 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS--TFTAA- 213 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE--ESCCC-
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE--eccCc-
Confidence 11145556543 22 21 468999998755443333 789999999999999955 22211
Q ss_pred ccHHHHHHHHhcCceeEeeeeeecCCe
Q 027039 190 REIKQIVELFRTSRFVDAANVTVNGSN 216 (229)
Q Consensus 190 ~~~~~l~~l~~~~~~~~~~~~~~~~~~ 216 (229)
..+.+.+.+.+|. +..++..+.+
T Consensus 214 ---~~vr~~l~~aGf~-~~~~~~~~~k 236 (689)
T 3pvc_A 214 ---GFVRRGLQQAGFN-VTKVKGFGQK 236 (689)
T ss_dssp ---HHHHHHHHHTTCE-EEEEECSSSS
T ss_pred ---HHHHHHHHhCCeE-EEeccCCCcc
Confidence 3456666677764 4445555544
No 326
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.31 E-value=0.32 Score=41.17 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=56.7
Q ss_pred cCCCC------CeEEEEcCCC-Chhh-HHHH-hC-CCCeEEEecCCCC---CCe--------EEEcCCCCCCCC-----C
Q 027039 93 LLFNH------SKVLCVSAGA-GHEV-MAFN-SI-GVADVTGVELMDS---LPL--------VSRADPHNLPFF-----D 146 (229)
Q Consensus 93 ~~~~~------~~vLDiG~G~-G~~~-~~l~-~~-g~~~v~~vD~s~~---~~~--------~~~~d~~~~~~~-----~ 146 (229)
.++++ .+||-+|+|. |..+ ..++ +. |..+|+++|.+++ ..+ .+ |..+..+. +
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHS
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhC
Confidence 45788 9999999865 7777 7788 65 8745999998876 322 22 33321111 1
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
+.+|+|+-..- ....+++..+.|++||+++++-
T Consensus 241 gg~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 241 EQMDFIYEATG-----FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CCEEEEEECSC-----CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC-----ChHHHHHHHHHHhcCCEEEEEe
Confidence 36899885321 1235778889999999987543
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.14 E-value=0.26 Score=41.49 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=50.1
Q ss_pred CCeEEEcCCCC-CC-CCCCceeEEEcc--c-ch-----------hhh-CHHHHHHHHHhccccCcEEEEEeecC--Cc--
Q 027039 131 LPLVSRADPHN-LP-FFDEAFDVAFTA--H-LA-----------EAL-FPSRFVGEMERTVKIGGVCMVLMEEC--AG-- 189 (229)
Q Consensus 131 ~~~~~~~d~~~-~~-~~~~~fD~V~~~--~-~~-----------~~~-~~~~~l~~~~~~LkpgG~lil~~~~~--~~-- 189 (229)
...++++|..+ +. +++++||+|++. + .. ... ...+.+.++.++|||||.+++.++.. .+
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCc
Confidence 34567788654 33 557899999987 2 11 111 35778899999999999999887754 11
Q ss_pred ----ccHHHHHHHHhcCceeE
Q 027039 190 ----REIKQIVELFRTSRFVD 206 (229)
Q Consensus 190 ----~~~~~l~~l~~~~~~~~ 206 (229)
+....+.+++...++.-
T Consensus 94 ~~~~~~~~~i~~~~~~~Gf~~ 114 (323)
T 1boo_A 94 ARSIYNFRVLIRMIDEVGFFL 114 (323)
T ss_dssp EECCHHHHHHHHHHHTTCCEE
T ss_pred ccccchHHHHHHHHHhCCCEE
Confidence 23445666677666543
No 328
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.10 E-value=0.3 Score=40.78 Aligned_cols=90 Identities=11% Similarity=0.041 Sum_probs=58.2
Q ss_pred HHhcccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCce
Q 027039 88 LQGKSLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAF 149 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~f 149 (229)
+.....++++.+||-.|+ | .|..+..++.. |. +|+++|.+++..+ ++..+-.++. .....+
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 334456789999999993 3 37777777766 87 9999998765221 2211111110 123479
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
|+|+.+.-. ..+....+.|++||+++++-
T Consensus 211 Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh------HHHHHHHHHhcCCCEEEEEe
Confidence 999864321 35677889999999988553
No 329
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=92.05 E-value=0.11 Score=44.10 Aligned_cols=63 Identities=8% Similarity=-0.098 Sum_probs=47.6
Q ss_pred cCCCCCeEEEEcCCCChhhHHHHhC--CCCeEEEecCCCCC-----------CeEEEcCCCCCC--CC----CCceeEEE
Q 027039 93 LLFNHSKVLCVSAGAGHEVMAFNSI--GVADVTGVELMDSL-----------PLVSRADPHNLP--FF----DEAFDVAF 153 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~G~~~~~l~~~--g~~~v~~vD~s~~~-----------~~~~~~d~~~~~--~~----~~~fD~V~ 153 (229)
.++++..++|..+|.|..+.++++. +.++|+|+|.++.+ +.+++++..++. +. .+++|.|+
T Consensus 54 ~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgIL 133 (347)
T 3tka_A 54 NIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGIL 133 (347)
T ss_dssp CCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHHHTTCTTCEEEEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHHhcCCCCcccEEE
Confidence 5688999999999999999999987 46799999999763 346666665542 00 13588888
Q ss_pred cc
Q 027039 154 TA 155 (229)
Q Consensus 154 ~~ 155 (229)
.+
T Consensus 134 fD 135 (347)
T 3tka_A 134 LD 135 (347)
T ss_dssp EE
T ss_pred EC
Confidence 76
No 330
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.67 E-value=0.21 Score=41.87 Aligned_cols=95 Identities=14% Similarity=0.057 Sum_probs=60.9
Q ss_pred HHHHHHHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCeEE--------EcCCCCCC-------
Q 027039 82 AHFFKHLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPLVS--------RADPHNLP------- 143 (229)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~~~--------~~d~~~~~------- 143 (229)
...+..+.....++++.+||-.|++ .|..+..++.. |. +|+++|.+++..+.. ..|..+..
T Consensus 135 ~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 135 MTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKR 213 (336)
T ss_dssp HHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHH
Confidence 3444444455677899999999983 36677776665 87 999999876522211 11222111
Q ss_pred CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 144 FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 144 ~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...+.+|+|+.+.-. ..+....+.|++||+++++
T Consensus 214 ~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 214 ECPKGIDVFFDNVGG------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEEC
T ss_pred hcCCCceEEEECCCc------chHHHHHHHHhhCCEEEEE
Confidence 113469999874321 3678888999999998854
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.56 E-value=0.095 Score=43.98 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=58.7
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCe-------EEEcCCCC-CC-------C
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPL-------VSRADPHN-LP-------F 144 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~-------~~~~d~~~-~~-------~ 144 (229)
..+..+.....++++.+||-.|++ .|..+..++.. |. +|+++|.+++..+ -...|..+ -. .
T Consensus 132 ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~ 210 (333)
T 1v3u_A 132 TAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKA 210 (333)
T ss_dssp HHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHH
Confidence 333334344567899999999983 45665555554 87 9999998754211 01123322 11 1
Q ss_pred CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 145 FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 145 ~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..+.+|+++.+.-. ..+++..+.|++||+++++
T Consensus 211 ~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 211 SPDGYDCYFDNVGG------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEEC
T ss_pred hCCCCeEEEECCCh------HHHHHHHHHHhcCCEEEEE
Confidence 12479999875422 2477888999999998754
No 332
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.52 E-value=0.11 Score=44.13 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=58.1
Q ss_pred hcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE--------E--EcCC---CCCC------CCCCc
Q 027039 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV--------S--RADP---HNLP------FFDEA 148 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~--------~--~~d~---~~~~------~~~~~ 148 (229)
....++++.+||-+|+|. |..+..+++. |...|+++|.+++..++ + ..+. .++. .....
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g 252 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCC
Confidence 345678999999999876 7777778776 87569999988753221 0 1110 0000 11346
Q ss_pred eeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 149 FDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 149 fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|+|+-..- ....++...+.|++||+++++
T Consensus 253 ~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 253 PAVALECTG-----VESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CSEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCC-----ChHHHHHHHHHhcCCCEEEEE
Confidence 898886321 124677888999999998854
No 333
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=91.41 E-value=0.17 Score=43.62 Aligned_cols=58 Identities=19% Similarity=0.134 Sum_probs=46.9
Q ss_pred CeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC----------CeEEEcCCCCCCC--------CCCceeEEEcc
Q 027039 98 SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL----------PLVSRADPHNLPF--------FDEAFDVAFTA 155 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~----------~~~~~~d~~~~~~--------~~~~fD~V~~~ 155 (229)
.+++|+-||.|.++..+...|+..+.++|+++.. ..++.+|+.++.. ....+|+|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 5899999999999999998898778899998762 3467788887631 24679999976
No 334
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=91.34 E-value=1.1 Score=36.58 Aligned_cols=113 Identities=8% Similarity=0.096 Sum_probs=65.1
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC--------CCCeEEEecCCCCCC----------------------------------
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI--------GVADVTGVELMDSLP---------------------------------- 132 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~--------g~~~v~~vD~s~~~~---------------------------------- 132 (229)
.-+..|+|+|+-.|.....++.. ...++++.|.=+..+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 55779999999999887776542 246899998433322
Q ss_pred -------------eEEEcCCCC-CC-----CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCC---cc
Q 027039 133 -------------LVSRADPHN-LP-----FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECA---GR 190 (229)
Q Consensus 133 -------------~~~~~d~~~-~~-----~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~---~~ 190 (229)
.++.|++.+ +| .+..+||+|+... .....-...++.+...|+|||.++ ++... ..
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D~Y~~t~~~le~~~p~l~~GGvIv--~DD~~~~~w~ 224 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-DLYEPTKAVLEAIRPYLTKGSIVA--FDELDNPKWP 224 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-CCHHHHHHHHHHHGGGEEEEEEEE--ESSTTCTTCT
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-cccchHHHHHHHHHHHhCCCcEEE--EcCCCCCCCh
Confidence 233444332 11 1234678877642 111223567888999999999954 44432 11
Q ss_pred cHHHHHHHHhcCceeEeeee
Q 027039 191 EIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 191 ~~~~l~~l~~~~~~~~~~~~ 210 (229)
...+-.+.|-...-++++.+
T Consensus 225 G~~~A~~ef~~~~~~~i~~~ 244 (257)
T 3tos_A 225 GENIAMRKVLGLDHAPLRLL 244 (257)
T ss_dssp HHHHHHHHHTCTTSSCCEEC
T ss_pred HHHHHHHHHHhhCCCeEEEc
Confidence 33333334444444445444
No 335
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.24 E-value=0.58 Score=39.75 Aligned_cols=82 Identities=15% Similarity=0.112 Sum_probs=54.9
Q ss_pred CCCeEEEEc-CCC-ChhhHHHHhC-CCCeEEEecCCCCCCe--------EEEcCCCC-C-----CCCCCceeEEEcccch
Q 027039 96 NHSKVLCVS-AGA-GHEVMAFNSI-GVADVTGVELMDSLPL--------VSRADPHN-L-----PFFDEAFDVAFTAHLA 158 (229)
Q Consensus 96 ~~~~vLDiG-~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~--------~~~~d~~~-~-----~~~~~~fD~V~~~~~~ 158 (229)
++.+||-+| +|. |..+..+++. +..+|+++|.+++..+ .+. |..+ + ....+.+|+|+-..-
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi-~~~~~~~~~v~~~~~~g~Dvvid~~g- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVI-DHSKPLAAEVAALGLGAPAFVFSTTH- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEE-CTTSCHHHHHHTTCSCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEE-eCCCCHHHHHHHhcCCCceEEEECCC-
Confidence 788999998 554 8888888875 4459999999865221 111 1111 0 112357999886321
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
....++++.+.|++||+++++
T Consensus 249 ----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 ----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ----HHHHHHHHHHHSCTTCEEEEC
T ss_pred ----chhhHHHHHHHhcCCCEEEEE
Confidence 235678889999999998855
No 336
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.23 E-value=0.22 Score=37.58 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC--------CCeEEEcCCCC-CCC----CCCceeEEEcccchhh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS--------LPLVSRADPHN-LPF----FDEAFDVAFTAHLAEA 160 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~--------~~~~~~~d~~~-~~~----~~~~fD~V~~~~~~~~ 160 (229)
....-|||+|-|.|..-..+.+. +..+++.+|-.-. .-.++++|+.+ +|. ...+.-++.+. +..+
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD-~G~g 117 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHAD-LGGH 117 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEEC-CCCS
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEEEee-cCCC
Confidence 45678999999999999999998 7779999987633 23488999876 332 13445555543 1111
Q ss_pred h---C---HHHHHHHHHhccccCcEEE
Q 027039 161 L---F---PSRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 161 ~---~---~~~~l~~~~~~LkpgG~li 181 (229)
. + ...+-.-+..+|.|||.++
T Consensus 118 ~~~~d~a~a~~lsplI~~~la~GGi~v 144 (174)
T 3iht_A 118 NREKNDRFARLISPLIEPHLAQGGLMV 144 (174)
T ss_dssp CHHHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred CcchhHHHHHhhhHHHHHHhcCCcEEE
Confidence 1 1 1223345678899999954
No 337
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.22 E-value=0.27 Score=41.43 Aligned_cols=93 Identities=15% Similarity=0.123 Sum_probs=60.3
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------C
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------F 144 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~ 144 (229)
..+..+.....++++.+||-.|++ .|..+..++.. |. +|++++.+++..+ ++..+ .++. .
T Consensus 146 ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~ 223 (342)
T 4eye_A 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREAT 223 (342)
T ss_dssp HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHh
Confidence 334444455677899999999973 36777777766 87 9999998776322 22222 2211 1
Q ss_pred CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 145 FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 145 ~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
....+|+|+.+.-. ..+....+.|++||+++++
T Consensus 224 ~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 224 GGAGVDMVVDPIGG------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp TTSCEEEEEESCC--------CHHHHHHTEEEEEEEEEC
T ss_pred CCCCceEEEECCch------hHHHHHHHhhcCCCEEEEE
Confidence 12369999864321 2467788999999998854
No 338
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.76 E-value=0.094 Score=44.25 Aligned_cols=86 Identities=17% Similarity=0.197 Sum_probs=57.7
Q ss_pred ccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC-----C-CCCceeEEEc
Q 027039 92 SLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP-----F-FDEAFDVAFT 154 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~-----~-~~~~fD~V~~ 154 (229)
..++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++..+- +.. . ....+|+|+-
T Consensus 167 ~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 167 PLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp GGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHHHHGGGCEEEEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHHHhCCCCCeEEEE
Confidence 3678999999999976 7777788776 5569999999876322 222111 110 0 1236888885
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..- ....++...+.|++||+++++
T Consensus 246 ~~G-----~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 246 FVG-----AQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp SSC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 321 134678899999999998854
No 339
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.74 E-value=0.21 Score=41.97 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=55.3
Q ss_pred cCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCCCCC------CceeEEEcccc
Q 027039 93 LLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLPFFD------EAFDVAFTAHL 157 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~~~~------~~fD~V~~~~~ 157 (229)
.++++.+||-+|+|. |..+..++.. |. +|+++|.++...+. ...|..+..+.+ +.+|+|+...-
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g 239 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 239 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence 568999999999964 6666666665 87 99999988653221 112322211100 36899886421
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
....++...+.|++||+++++
T Consensus 240 -----~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 240 -----SKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEEC
T ss_pred -----CHHHHHHHHHHhhcCCEEEEe
Confidence 124577888999999998754
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.72 E-value=0.59 Score=39.42 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=56.2
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCC-CCCC------CC---CCce
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADP-HNLP------FF---DEAF 149 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~-~~~~------~~---~~~f 149 (229)
...++++.+||-+|+|. |..+..++.. |. +|+++|.+++..+ ++..+- .+.. .. ...+
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCC
Confidence 34578999999999875 6777777765 87 6999998865221 222110 1110 01 2468
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+|+-..- ....++...+.|+|||+++++
T Consensus 242 D~vid~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 242 NVTIDCSG-----NEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SEEEECSC-----CHHHHHHHHHHSCTTCEEEEC
T ss_pred CEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 99886421 123577888999999998754
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.60 E-value=0.93 Score=41.83 Aligned_cols=64 Identities=19% Similarity=0.211 Sum_probs=41.9
Q ss_pred CCceeEEEcccchhhhCH----HHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeeecCCe
Q 027039 146 DEAFDVAFTAHLAEALFP----SRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTVNGSN 216 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~~~----~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 216 (229)
+..||+++...+....+| .++++++.+.++|||.+. +.... ..+.+.+.+.+|. +..+...|.+
T Consensus 177 ~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~--t~~~~----~~vr~~L~~aGf~-v~~~~~~g~k 244 (676)
T 3ps9_A 177 NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA--TFTSA----GFVRRGLQDAGFT-MQKRKGFGRK 244 (676)
T ss_dssp TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE--ESCCC----HHHHHHHHHHTCE-EEEEECSTTC
T ss_pred CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE--eccCc----HHHHHHHHhCCeE-EEeccccccc
Confidence 467999998765544444 789999999999999955 22211 3455566666653 4445555544
No 342
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.48 E-value=0.51 Score=39.93 Aligned_cols=94 Identities=12% Similarity=0.144 Sum_probs=58.2
Q ss_pred HHHHHHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------C
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------F 144 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~ 144 (229)
..+..+.....++++.+||-.|++ .|..+..++.. |. +|+++|.+++..+. ...|..+.. .
T Consensus 157 ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 157 TAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYV 235 (351)
T ss_dssp HHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHc
Confidence 333334344567899999999973 35666666655 87 89999987652210 111222211 1
Q ss_pred CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 145 FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 145 ~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
....+|+|+.+.- ...+....+.|++||+++++
T Consensus 236 ~~~~~D~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 236 GEKGIDIIIEMLA------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp CTTCEEEEEESCH------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCcEEEEECCC------hHHHHHHHHhccCCCEEEEE
Confidence 1236999987532 13467788999999998754
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.93 E-value=0.55 Score=39.52 Aligned_cols=89 Identities=18% Similarity=0.073 Sum_probs=56.9
Q ss_pred hcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCCCceeEE
Q 027039 90 GKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVA 152 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~V 152 (229)
....+ ++.+||-+|+|. |..+..++.. |..+|+++|.+++..++ ...|..+.. .....+|+|
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEE
Confidence 34456 899999999964 6666677665 76689999988652220 011222111 112369999
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
+...- ....++...+.|+++|+++.+-
T Consensus 241 id~~g-----~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 241 LEFSG-----APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EECSC-----CHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-----CHHHHHHHHHHHhcCCEEEEEc
Confidence 86421 1346788889999999987543
No 344
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.90 E-value=0.17 Score=42.61 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=55.5
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeEE------EcCCCCCCC-------CCCceeEEEcc
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLVS------RADPHNLPF-------FDEAFDVAFTA 155 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~~------~~d~~~~~~-------~~~~fD~V~~~ 155 (229)
...+ ++.+||-+|+|. |..+..++.. |..+|+++|.+++..++. ..|..+..+ ....+|+|+-.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 4456 899999999864 6667777765 766899999876522211 112221110 02368998864
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.- ....++...+.|+++|+++++
T Consensus 239 ~g-----~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 239 SG-----NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 21 134578888999999998754
No 345
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.70 E-value=0.29 Score=41.83 Aligned_cols=84 Identities=17% Similarity=0.204 Sum_probs=54.8
Q ss_pred cCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCC-C-CCCCCceeEEEcccchh
Q 027039 93 LLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHN-L-PFFDEAFDVAFTAHLAE 159 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~-~-~~~~~~fD~V~~~~~~~ 159 (229)
.++++.+||-+|+|. |..+..+++. |. +|+++|.+++..+ ++..+-.+ . .. .+.+|+|+-..-.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~-~~g~Dvvid~~g~- 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNADEMAAH-LKSFDFILNTVAA- 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTT-TTCEEEEEECCSS-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHh-hcCCCEEEECCCC-
Confidence 568999999999875 7777777775 77 7999998876322 22111000 0 01 1479999864211
Q ss_pred hhCHHHHHHHHHhccccCcEEEEE
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...++...+.|++||+++++
T Consensus 268 ----~~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 268 ----PHNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ----CCCHHHHHTTEEEEEEEEEC
T ss_pred ----HHHHHHHHHHhccCCEEEEe
Confidence 12356778899999998744
No 346
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.58 E-value=0.12 Score=44.29 Aligned_cols=88 Identities=17% Similarity=0.091 Sum_probs=56.2
Q ss_pred ccc-CCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcC---CCCC-----CC-CCCce
Q 027039 91 KSL-LFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRAD---PHNL-----PF-FDEAF 149 (229)
Q Consensus 91 ~~~-~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d---~~~~-----~~-~~~~f 149 (229)
... ++++.+||-+|+|. |..+..+++. |..+|+++|.+++..+ ++..+ -.++ .. ....+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 345 78999999999764 6777777766 7459999998865222 22211 0010 01 12369
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+|+-..- ....++...+.|++||+++++
T Consensus 269 Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 269 DFILEATG-----DSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEEECSS-----CTTHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 99986421 123567788999999998754
No 347
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=89.53 E-value=0.1 Score=44.42 Aligned_cols=108 Identities=8% Similarity=0.061 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCChhhHHHHhCC--CCeEEEecCCCCC----------CeEEEcCCCCCCC---CCCceeEEEcccc----
Q 027039 97 HSKVLCVSAGAGHEVMAFNSIG--VADVTGVELMDSL----------PLVSRADPHNLPF---FDEAFDVAFTAHL---- 157 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~g--~~~v~~vD~s~~~----------~~~~~~d~~~~~~---~~~~fD~V~~~~~---- 157 (229)
..+++|+-||.|.++..+...| +..+.++|+++.. ..++.+|+.++.. +...+|+++...-
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 3589999999999999999888 5579999998762 2367888887641 1126899998611
Q ss_pred --h---hhh-CHH-HHHH---HHHhccc--cCcEEEEEeec-CCcccHHHHHHHHhcCce
Q 027039 158 --A---EAL-FPS-RFVG---EMERTVK--IGGVCMVLMEE-CAGREIKQIVELFRTSRF 204 (229)
Q Consensus 158 --~---~~~-~~~-~~l~---~~~~~Lk--pgG~lil~~~~-~~~~~~~~l~~l~~~~~~ 204 (229)
. ... ++. .++. ++.+.++ |.-.++=.|.. ........+.+.+...+.
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~~~~~~~i~~~l~~~GY 141 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENCGF 141 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGGSHHHHHHHHHHHHTTE
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccCHHHHHHHHHHHHHCCC
Confidence 1 011 222 2344 3444455 65443322433 123456667777776554
No 348
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.49 E-value=0.37 Score=40.31 Aligned_cols=87 Identities=15% Similarity=0.091 Sum_probs=56.2
Q ss_pred hcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCceeE
Q 027039 90 GKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAFDV 151 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~fD~ 151 (229)
....++++.+||-+|++ -|..+..++.. |. +|+++|.+++..+ ++..+-.+.. .....+|+
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceE
Confidence 34467899999999943 36677777665 87 9999998765221 2211111110 11346999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+.+.-. ..++...+.|++||+++++
T Consensus 221 vid~~g~------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 221 SFDSVGK------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEECCGG------GGHHHHHHHEEEEEEEEEC
T ss_pred EEECCCh------HHHHHHHHHhccCCEEEEE
Confidence 9975321 3567788899999998855
No 349
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.41 E-value=0.73 Score=39.09 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=56.7
Q ss_pred cccCCCCCeEEEEc--CCCChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC-----CCCCceeEEE
Q 027039 91 KSLLFNHSKVLCVS--AGAGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP-----FFDEAFDVAF 153 (229)
Q Consensus 91 ~~~~~~~~~vLDiG--~G~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~-----~~~~~fD~V~ 153 (229)
...++++.+||-.| .|.|..+..++.. |. +|+++|.+++..+ ++..+-.++. ...+.+|+|+
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 34568999999999 3457777777766 87 8999998765211 2211111110 1124699998
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.+.-. ..++.+.+.|+++|+++++-
T Consensus 237 d~~g~------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 237 ESVGG------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp ECSCT------HHHHHHHHHEEEEEEEEECC
T ss_pred ECCCH------HHHHHHHHHHhcCCEEEEEe
Confidence 64321 46778889999999987543
No 350
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=89.15 E-value=0.31 Score=42.43 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCCCChhhHHHH-hC-C-CCeEEEecCCCC
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFN-SI-G-VADVTGVELMDS 130 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~-~~-g-~~~v~~vD~s~~ 130 (229)
++++..++|||++.|..+..++ .. + .++|+++|+++.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~ 263 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRI 263 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHH
Confidence 3788999999999999999887 33 3 369999999986
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=88.86 E-value=0.78 Score=38.41 Aligned_cols=88 Identities=13% Similarity=0.023 Sum_probs=53.1
Q ss_pred cccCCCCCeEEEEcCCC-ChhhHHHHh-CCCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCceeEEE
Q 027039 91 KSLLFNHSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAFDVAF 153 (229)
Q Consensus 91 ~~~~~~~~~vLDiG~G~-G~~~~~l~~-~g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~fD~V~ 153 (229)
....+++.+||=+|+|+ |..+..++. .+..+|+++|.+++..+ ++...-.+.. .....+|.++
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence 34568999999999987 344444444 45559999999876221 2211111110 1123466655
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.... ....+....+.++++|+++++
T Consensus 238 ~~~~-----~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 238 VCAV-----ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp ECCS-----CHHHHHHHHHTEEEEEEEEEC
T ss_pred Eecc-----CcchhheeheeecCCceEEEE
Confidence 4221 234677888999999998755
No 352
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.69 E-value=0.76 Score=38.33 Aligned_cols=107 Identities=11% Similarity=0.125 Sum_probs=68.2
Q ss_pred CeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------CeEEEcCCCCCCCC-CCceeEEEcc------cchh--
Q 027039 98 SKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------PLVSRADPHNLPFF-DEAFDVAFTA------HLAE-- 159 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------~~~~~~d~~~~~~~-~~~fD~V~~~------~~~~-- 159 (229)
++|+|+=||.|-+...+.+.|+.-+.++|+++.. -.++.+|+.++... -..+|+++.. ....
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~~ 80 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGSL 80 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCCc
Confidence 4799999999999999988899788899999883 34778898876421 1468999976 1111
Q ss_pred -hh-CHH-HHHH---HHHhccccCcEEEEEeec----CCcccHHHHHHHHhcCce
Q 027039 160 -AL-FPS-RFVG---EMERTVKIGGVCMVLMEE----CAGREIKQIVELFRTSRF 204 (229)
Q Consensus 160 -~~-~~~-~~l~---~~~~~LkpgG~lil~~~~----~~~~~~~~l~~l~~~~~~ 204 (229)
.. ++. .++. ++.+.+||.-.++=-|.. .....+..+.+.+.+.+-
T Consensus 81 ~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY 135 (331)
T 3ubt_Y 81 RGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGY 135 (331)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHTE
T ss_pred cCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccccccchhhhhhhhhccCCc
Confidence 11 332 2333 445557887554322322 123356666666665443
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.44 E-value=0.73 Score=38.91 Aligned_cols=94 Identities=11% Similarity=0.076 Sum_probs=58.5
Q ss_pred HHHHHHhcccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC-----CCC
Q 027039 84 FFKHLQGKSLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP-----FFD 146 (229)
Q Consensus 84 ~~~~l~~~~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~-----~~~ 146 (229)
.+..+.....++++.+||-.|+ | -|..+..++.. |. +|+++|.+++..+ ++..+-.+.. ...
T Consensus 155 a~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 4dup_A 155 VWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETG 233 (353)
T ss_dssp HHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHS
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhC
Confidence 3333445566789999999954 3 36677777665 87 8999998765221 2211111110 013
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
+.+|+|+.+.-. ..+....+.|++||+++++-
T Consensus 234 ~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 234 QGVDIILDMIGA------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SCEEEEEESCCG------GGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCCH------HHHHHHHHHhccCCEEEEEE
Confidence 469999875322 24677888999999987553
No 354
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.25 E-value=1.3 Score=37.18 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=52.4
Q ss_pred CCCeEEEEc-CCC-ChhhHHHHhC-CCCeEEEecCCCCCCe--------EEEcCCCC-C-----CCCCCceeEEEcccch
Q 027039 96 NHSKVLCVS-AGA-GHEVMAFNSI-GVADVTGVELMDSLPL--------VSRADPHN-L-----PFFDEAFDVAFTAHLA 158 (229)
Q Consensus 96 ~~~~vLDiG-~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~--------~~~~d~~~-~-----~~~~~~fD~V~~~~~~ 158 (229)
++.+||-+| +|. |..+..++.. |. +|+++|.+++..+ .+ .|..+ + ....+.+|+|+-..-
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFN- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCC-
Confidence 899999994 443 6777777766 87 9999998765221 11 11111 1 012346999886321
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
....++.+.+.|+++|+++.+
T Consensus 227 ----~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 ----TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEES
T ss_pred ----chHHHHHHHHHhccCCEEEEE
Confidence 245677888999999998754
No 355
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=88.20 E-value=0.64 Score=38.91 Aligned_cols=91 Identities=10% Similarity=0.005 Sum_probs=57.1
Q ss_pred HhcccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC------CCCCceeE
Q 027039 89 QGKSLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP------FFDEAFDV 151 (229)
Q Consensus 89 ~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~------~~~~~fD~ 151 (229)
......+++.+||-.|+|. |..+..++.. |...++++|.+++..+ ++..+-.+.+ -....+|+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccc
Confidence 3345668999999999876 5666666665 8878899998876322 2221111110 01235677
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
|+...- -...++...+.+++||++++.-
T Consensus 233 v~d~~G-----~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 233 ILETAG-----VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEECSC-----SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccc-----ccchhhhhhheecCCeEEEEEe
Confidence 764211 2346777889999999988543
No 356
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=87.88 E-value=0.77 Score=37.65 Aligned_cols=65 Identities=17% Similarity=0.074 Sum_probs=38.5
Q ss_pred CCceeEEEcc----cchh-------hh-CHHHHHHHHHhccccCcEEEEEeecC-CcccHHHHHHHHhcCceeEeeee
Q 027039 146 DEAFDVAFTA----HLAE-------AL-FPSRFVGEMERTVKIGGVCMVLMEEC-AGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 146 ~~~fD~V~~~----~~~~-------~~-~~~~~l~~~~~~LkpgG~lil~~~~~-~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
-+.||+|+.| +-.| |. ...-+-....+.|||||.+++..... |-.+..-+..+-++.++.++..-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P 286 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKP 286 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecC
Confidence 3799999998 1111 11 22334467778999999988554432 22233345556666666555543
No 357
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.80 E-value=1.3 Score=37.18 Aligned_cols=85 Identities=12% Similarity=0.057 Sum_probs=55.5
Q ss_pred ccCCCCCeEEEEcC--CCChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCCCceeEEE
Q 027039 92 SLLFNHSKVLCVSA--GAGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAFDVAF 153 (229)
Q Consensus 92 ~~~~~~~~vLDiG~--G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~fD~V~ 153 (229)
..++++.+||-+|+ |.|..+..++.. |. +|+++|.+++..+. ...|..+.. .....+|+|+
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 46789999999998 456777777665 87 99999987652210 111222211 1124799998
Q ss_pred cccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 154 TAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.+.-. +.++.+.+.|+++|+++++
T Consensus 241 ~~~g~------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 241 DHTGA------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp ESSCS------SSHHHHHHHEEEEEEEEES
T ss_pred ECCCH------HHHHHHHHhhccCCEEEEE
Confidence 75321 2467788899999998754
No 358
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=87.52 E-value=0.2 Score=42.27 Aligned_cols=86 Identities=14% Similarity=0.104 Sum_probs=55.6
Q ss_pred cCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCC-CC-------CCCCceeEEEc
Q 027039 93 LLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHN-LP-------FFDEAFDVAFT 154 (229)
Q Consensus 93 ~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~-~~-------~~~~~fD~V~~ 154 (229)
.++++.+||-+|++ .|..+..++.. |. +|+++|.+++..+. ...|..+ -. ..++.+|+|+.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEE
Confidence 56889999999983 46666666654 87 99999988762210 1123321 11 01126899987
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
+.- ....++.+.+.|++||+++++-
T Consensus 245 ~~g-----~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 245 VSV-----SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp CSS-----CHHHHHHHTTSEEEEEEEEECC
T ss_pred CCC-----cHHHHHHHHHHHhcCCEEEEEe
Confidence 532 1346788899999999987543
No 359
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=87.47 E-value=0.17 Score=41.79 Aligned_cols=89 Identities=17% Similarity=0.113 Sum_probs=56.3
Q ss_pred HHHHhcccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCeEEE-------cCCCC-CCCCC--CceeEE
Q 027039 86 KHLQGKSLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPLVSR-------ADPHN-LPFFD--EAFDVA 152 (229)
Q Consensus 86 ~~l~~~~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~~~~-------~d~~~-~~~~~--~~fD~V 152 (229)
..+.... ++++.+||-+|+ | .|..+..++.. |. +|+++|.+++..+... .|..+ ..+.+ +.+|+|
T Consensus 116 ~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~v 193 (302)
T 1iz0_A 116 LALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLV 193 (302)
T ss_dssp HHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEE
T ss_pred HHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEE
Confidence 3333344 789999999998 3 36777777665 87 9999998776433110 11111 00000 468988
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+. . .. ..++...+.++++|+++.+
T Consensus 194 id-~-g~-----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 194 LE-V-RG-----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EE-C-SC-----TTHHHHHTTEEEEEEEEEC
T ss_pred EE-C-CH-----HHHHHHHHhhccCCEEEEE
Confidence 86 3 21 3567888999999998754
No 360
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=87.47 E-value=0.29 Score=40.69 Aligned_cols=83 Identities=16% Similarity=0.218 Sum_probs=53.5
Q ss_pred CCCCC-eEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEc-CCCC-CCCCCCceeEEEcccch
Q 027039 94 LFNHS-KVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRA-DPHN-LPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 94 ~~~~~-~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~-d~~~-~~~~~~~fD~V~~~~~~ 158 (229)
++++. +||-.|+ | .|..+..+++. |. +|+++|.+++..+ ++.. +... .....+.+|+|+-.. .
T Consensus 143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~-g 220 (324)
T 3nx4_A 143 IRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTV-G 220 (324)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESS-C
T ss_pred cCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECC-C
Confidence 44432 4999997 3 37788888876 87 9999998876322 2211 1111 112345799988532 1
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...+++..+.|+|+|+++++
T Consensus 221 -----~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 221 -----DKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp -----HHHHHHHHHTEEEEEEEEEC
T ss_pred -----cHHHHHHHHHHhcCCEEEEE
Confidence 12788899999999998854
No 361
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=87.34 E-value=0.78 Score=38.42 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=58.8
Q ss_pred HHHHHHHhcccCCCCCeEEEEcC--CCChhhHHHHhC-CCCeEEEecCCCCCCeE--------EEcCCCCC-CC------
Q 027039 83 HFFKHLQGKSLLFNHSKVLCVSA--GAGHEVMAFNSI-GVADVTGVELMDSLPLV--------SRADPHNL-PF------ 144 (229)
Q Consensus 83 ~~~~~l~~~~~~~~~~~vLDiG~--G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~--------~~~d~~~~-~~------ 144 (229)
..+..+.....++++.+||-.|+ |.|..+..++.. |. +|+++|.+++..+. ...|..+. .+
T Consensus 142 ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 142 TAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKR 220 (345)
T ss_dssp HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHH
Confidence 33333434456789999999997 346666666665 87 89999987542111 11122211 11
Q ss_pred -CCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 145 -FDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 145 -~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..+.+|+|+.+.- ...++...+.|++||+++++
T Consensus 221 ~~~~~~d~vi~~~g------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 221 CFPNGIDIYFENVG------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HCTTCEEEEEESSC------HHHHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCcEEEECCC------HHHHHHHHHHHhcCCEEEEE
Confidence 1246999987532 13678888999999998754
No 362
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.32 E-value=0.75 Score=38.25 Aligned_cols=90 Identities=10% Similarity=0.025 Sum_probs=56.6
Q ss_pred HHhcccCCCCCeEEEEcC--CCChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCCCce
Q 027039 88 LQGKSLLFNHSKVLCVSA--GAGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFDEAF 149 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~--G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~~f 149 (229)
+.....++++.+||-.|+ |.|.....++.. |. +|+++|.+++..+. ...|..+.. .....+
T Consensus 132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred HHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCc
Confidence 333456789999999994 335666666655 87 99999987652110 111222211 112469
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
|+++.+.- ...++.+.+.|++||+++++-
T Consensus 211 D~vi~~~g------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC------GGGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc------hHHHHHHHHHhcCCCEEEEEe
Confidence 99987532 235677889999999987543
No 363
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=87.01 E-value=1.4 Score=37.33 Aligned_cols=77 Identities=22% Similarity=0.206 Sum_probs=51.3
Q ss_pred CCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCC---CC--------CeEEEcCCCCCCCCC------CceeEEEcccc
Q 027039 97 HSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMD---SL--------PLVSRADPHNLPFFD------EAFDVAFTAHL 157 (229)
Q Consensus 97 ~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~---~~--------~~~~~~d~~~~~~~~------~~fD~V~~~~~ 157 (229)
+.+||-+|+|. |..+..++.. |. +|+++|.++ +. .+.+ | .+ .+.+ +.+|+|+.+.-
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECCC
Confidence 99999999843 5555666655 87 999999987 42 2222 3 33 2211 46999987532
Q ss_pred hhhhCHHHHH-HHHHhccccCcEEEEE
Q 027039 158 AEALFPSRFV-GEMERTVKIGGVCMVL 183 (229)
Q Consensus 158 ~~~~~~~~~l-~~~~~~LkpgG~lil~ 183 (229)
. ...+ +...+.|+++|+++++
T Consensus 256 ~-----~~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 256 A-----DVNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp C-----CTHHHHHHGGGEEEEEEEEEC
T ss_pred C-----hHHHHHHHHHHHhcCCEEEEE
Confidence 1 1245 7888999999998754
No 364
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.90 E-value=1.1 Score=37.34 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=57.5
Q ss_pred HHHHhcccCCCCCeEEEEcC--CCChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCCC
Q 027039 86 KHLQGKSLLFNHSKVLCVSA--GAGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFDE 147 (229)
Q Consensus 86 ~~l~~~~~~~~~~~vLDiG~--G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~~ 147 (229)
..+.....++++.+||-.|+ |.|.....++.. |. +|+++|.+++..+. ...|..+.. ....
T Consensus 135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTC
T ss_pred HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCC
Confidence 33333456789999999995 446666666654 87 99999988642110 111222211 1124
Q ss_pred ceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 148 AFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 148 ~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.+|+++.+.-. ..++...+.|++||+++++-
T Consensus 214 ~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 214 GVDVVYDSIGK------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CEEEEEECSCT------TTHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEECCcH------HHHHHHHHhhccCCEEEEEe
Confidence 69999875321 35678889999999987543
No 365
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=86.81 E-value=1.1 Score=39.27 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=54.9
Q ss_pred ccCCCCCeEEEEcC-CC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC----------------
Q 027039 92 SLLFNHSKVLCVSA-GA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP---------------- 143 (229)
Q Consensus 92 ~~~~~~~~vLDiG~-G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~---------------- 143 (229)
..++++.+||-+|+ |. |..+..++.. |. ++++++.+++..+ ++...-.+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 46789999999997 43 7777777776 77 8888886655221 2221111110
Q ss_pred -------CCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 144 -------FFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 144 -------~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.....+|+|+-..- .+.+....+.|++||+++++
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHhCCCCCcEEEEcCC------chhHHHHHHHhhCCcEEEEE
Confidence 01247999886321 14677888999999998854
No 366
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=86.66 E-value=0.74 Score=38.26 Aligned_cols=87 Identities=14% Similarity=0.084 Sum_probs=53.7
Q ss_pred hcccCCCCCeEEEEc-CCC-ChhhHHHHhC-CCCeEEEecCCCC--------CCeEEEcCCCC-CCCCCCceeEEEcccc
Q 027039 90 GKSLLFNHSKVLCVS-AGA-GHEVMAFNSI-GVADVTGVELMDS--------LPLVSRADPHN-LPFFDEAFDVAFTAHL 157 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG-~G~-G~~~~~l~~~-g~~~v~~vD~s~~--------~~~~~~~d~~~-~~~~~~~fD~V~~~~~ 157 (229)
....++++.+||-+| +|. |..+..+++. |. +|++++.++. ...++..+-.+ +.-.-..+|+|+-..-
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC
Confidence 445678999999997 554 7888888776 87 8888864322 11122211111 1101146899886321
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.. .+....+.|++||+++.+
T Consensus 225 -----~~-~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 225 -----GD-VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -----HH-HHHHHGGGEEEEEEEEEC
T ss_pred -----cH-HHHHHHHhccCCCEEEEe
Confidence 12 237788999999998854
No 367
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.14 E-value=1.5 Score=36.71 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=36.1
Q ss_pred EE-EcCCCC-C-CCCCCceeEEEcc--c-ch--------hhh-CHHHHHHHHHhccccCcEEEEEeecC
Q 027039 134 VS-RADPHN-L-PFFDEAFDVAFTA--H-LA--------EAL-FPSRFVGEMERTVKIGGVCMVLMEEC 187 (229)
Q Consensus 134 ~~-~~d~~~-~-~~~~~~fD~V~~~--~-~~--------~~~-~~~~~l~~~~~~LkpgG~lil~~~~~ 187 (229)
++ ++|..+ + .+++++||+|++. + .. ... .....+.++.++|||||.+++..+..
T Consensus 41 l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 41 VYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp EEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC
T ss_pred EEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc
Confidence 44 677644 1 2346788888886 1 11 111 34677888999999999999887653
No 368
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=85.96 E-value=1.1 Score=36.17 Aligned_cols=69 Identities=13% Similarity=0.241 Sum_probs=39.9
Q ss_pred EEEcCCCC-C-CCCCCceeEEEcc--c-ch-----------hhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHH
Q 027039 134 VSRADPHN-L-PFFDEAFDVAFTA--H-LA-----------EAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIV 196 (229)
Q Consensus 134 ~~~~d~~~-~-~~~~~~fD~V~~~--~-~~-----------~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~ 196 (229)
++++|..+ + .+++++||+|++. + .. ... .....+.++.++|||||.+++.... +....+.
T Consensus 7 l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d---~~~~~~~ 83 (260)
T 1g60_A 7 IHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---FNCAFIC 83 (260)
T ss_dssp EEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---HHHHHHH
T ss_pred EEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc---HHHHHHH
Confidence 45566533 1 1345688888876 1 11 001 2466788899999999998876532 2333444
Q ss_pred HHHhcCcee
Q 027039 197 ELFRTSRFV 205 (229)
Q Consensus 197 ~l~~~~~~~ 205 (229)
..+...+|.
T Consensus 84 ~~~~~~gf~ 92 (260)
T 1g60_A 84 QYLVSKGMI 92 (260)
T ss_dssp HHHHHTTCE
T ss_pred HHHHhhccc
Confidence 455544443
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=85.71 E-value=1.2 Score=37.57 Aligned_cols=93 Identities=8% Similarity=-0.007 Sum_probs=56.8
Q ss_pred HHHHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCC--------CCC
Q 027039 85 FKHLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLP--------FFD 146 (229)
Q Consensus 85 ~~~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~--------~~~ 146 (229)
+..+.....++++.+||-.|++ .|..+..++.. |. +|+++|.+++..+. ...|..+.. ...
T Consensus 151 ~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T 2j8z_A 151 FQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKG 229 (354)
T ss_dssp HHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTT
T ss_pred HHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcC
Confidence 3333344567899999999853 35666665554 77 89999987652210 111222211 112
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
..+|+++.+.-. ..+....+.|++||+++++-
T Consensus 230 ~~~d~vi~~~G~------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGG------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCG------GGHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCc------hHHHHHHHhccCCCEEEEEe
Confidence 469999875322 13567788999999987543
No 370
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.35 E-value=1.4 Score=36.59 Aligned_cols=84 Identities=19% Similarity=0.177 Sum_probs=54.2
Q ss_pred cCCCCC-eEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEc-C--CCCC-CCCCCceeEEEcc
Q 027039 93 LLFNHS-KVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRA-D--PHNL-PFFDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~-~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~-d--~~~~-~~~~~~fD~V~~~ 155 (229)
.++++. +||-+|+ | -|..+..++.. |. +|++++.+++..+ ++.. + .... ....+.+|+|+-.
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEES
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEEC
Confidence 457775 8999997 3 36777777776 87 7999998866322 2211 1 1111 1223579998864
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.-. ..+.+..+.+++||+++++
T Consensus 225 ~g~------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 225 VGG------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCT------HHHHHHHTTEEEEEEEEEC
T ss_pred CcH------HHHHHHHHhhcCCCEEEEE
Confidence 211 2577888999999998754
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=84.70 E-value=1.4 Score=36.93 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=56.1
Q ss_pred HHhcccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCC--------CeEEEcCCCCCC------CCCCcee
Q 027039 88 LQGKSLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSL--------PLVSRADPHNLP------FFDEAFD 150 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~--------~~~~~~d~~~~~------~~~~~fD 150 (229)
+.....++++.+||-+|+ | .|..+..++.. |. +|+++ .+++. .+.+. +..++. .....+|
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCce
Confidence 335567789999999994 3 37777777766 77 89988 55442 22222 211111 1224799
Q ss_pred EEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 151 VAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 151 ~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+|+-+.- ...+....+.|+++|+++++
T Consensus 219 ~vid~~g------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 219 LVYDTLG------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEESSC------THHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC------cHHHHHHHHHHhcCCeEEEE
Confidence 9986422 13677888899999998854
No 372
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.96 E-value=1.6 Score=36.66 Aligned_cols=90 Identities=19% Similarity=0.121 Sum_probs=52.2
Q ss_pred HHHhcccCCCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCC-------CCeEEEcCCCCCC-----CCCCceeE
Q 027039 87 HLQGKSLLFNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDS-------LPLVSRADPHNLP-----FFDEAFDV 151 (229)
Q Consensus 87 ~l~~~~~~~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~-------~~~~~~~d~~~~~-----~~~~~fD~ 151 (229)
.+.....++++.+||=.|++ .|..+..+++. |...|++++.+.. .-.++. +-.++. ...+.+|+
T Consensus 133 ~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~g~Dv 211 (349)
T 4a27_A 133 MLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFD-RNADYVQEVKRISAEGVDI 211 (349)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHGGGSSEEEE-TTSCHHHHHHHHCTTCEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHcCCcEEEc-CCccHHHHHHHhcCCCceE
Confidence 33445677899999999983 36777777776 5558998873322 111222 111110 12357999
Q ss_pred EEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 152 AFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 152 V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+-..-. ..+....+.|++||+++++
T Consensus 212 v~d~~g~------~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 212 VLDCLCG------DNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEEECC-------------CTTEEEEEEEEEE
T ss_pred EEECCCc------hhHHHHHHHhhcCCEEEEE
Confidence 9863211 1236778999999998855
No 373
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=83.78 E-value=0.53 Score=39.84 Aligned_cols=85 Identities=12% Similarity=0.082 Sum_probs=52.6
Q ss_pred cCC-CCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeEEE--------cCCCC---CCCCCCceeEEEcccch
Q 027039 93 LLF-NHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPLVSR--------ADPHN---LPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 93 ~~~-~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~~~--------~d~~~---~~~~~~~fD~V~~~~~~ 158 (229)
.++ ++.+||-+|+|. |..+..+++. |. +|+++|.+++..+... .|..+ +.-..+.+|+|+-..-.
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 456 899999999864 6666677766 87 8999998876322110 01111 00001368998864211
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
...++...+.|++||+++.+
T Consensus 255 -----~~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 255 -----HHALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp -----CCCSHHHHTTEEEEEEEEEC
T ss_pred -----hHHHHHHHHHhccCCEEEEe
Confidence 11245677899999998754
No 374
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=83.51 E-value=4.5 Score=33.95 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=52.3
Q ss_pred HHhcccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCC------------CCeEEEcC---CCCCC-CCC--
Q 027039 88 LQGKSLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDS------------LPLVSRAD---PHNLP-FFD-- 146 (229)
Q Consensus 88 l~~~~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~------------~~~~~~~d---~~~~~-~~~-- 146 (229)
+.....++++.+||-+|+ | .|..+..+++. |...+..++.++. .-.++..+ ..++. ...
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~ 238 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDM 238 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSS
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCC
Confidence 333456789999999997 3 37888888876 8745555555442 11122210 11111 111
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+.+|+|+-..-. .. ..+..+.|++||+++++
T Consensus 239 ~~~Dvvid~~g~-----~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 239 PQPRLALNCVGG-----KS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp CCCSEEEESSCH-----HH-HHHHHTTSCTTCEEEEC
T ss_pred CCceEEEECCCc-----HH-HHHHHHhhCCCCEEEEE
Confidence 148998853211 11 24577899999998855
No 375
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=83.24 E-value=1.8 Score=36.34 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=55.6
Q ss_pred hcccCCCC--CeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCeE--------EEcCCCCCC-------CCCCce
Q 027039 90 GKSLLFNH--SKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPLV--------SRADPHNLP-------FFDEAF 149 (229)
Q Consensus 90 ~~~~~~~~--~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~~--------~~~d~~~~~-------~~~~~f 149 (229)
....++++ .+||-.|++ .|..+..++.. |..+|+++|.+++..+. ...|..+.. ...+.+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence 44567888 999999983 35555555554 76689999987542110 112222211 111268
Q ss_pred eEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 150 DVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 150 D~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
|+++.+.- ...++...+.|++||+++++
T Consensus 232 d~vi~~~G------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 232 DVYFDNVG------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEEEESCC------HHHHHHHHHTEEEEEEEEEC
T ss_pred CEEEECCC------HHHHHHHHHHhccCcEEEEE
Confidence 99987532 25678888999999998754
No 376
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.18 E-value=0.84 Score=38.29 Aligned_cols=39 Identities=8% Similarity=-0.030 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL 133 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~ 133 (229)
..++..|||.-||+|..+.+....|. +.+|+|+++...+
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~ 288 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVA 288 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHH
Confidence 37899999999999999999888876 9999999987444
No 377
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=83.00 E-value=3.7 Score=29.42 Aligned_cols=86 Identities=9% Similarity=-0.085 Sum_probs=51.1
Q ss_pred CCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCC--------CCeEEEcCCCCCC----CCCCceeEEEcccchhhhC
Q 027039 97 HSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDS--------LPLVSRADPHNLP----FFDEAFDVAFTAHLAEALF 162 (229)
Q Consensus 97 ~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~----~~~~~fD~V~~~~~~~~~~ 162 (229)
..+|+=+|+|. |. .+..|.+.|. +|+++|.+++ ...++.+|..+.. ..-..+|+|++..-...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~-- 83 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY-- 83 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH--
Confidence 46788899864 32 2333444477 9999999876 3457788877632 11247888886321111
Q ss_pred HHHHHHHHHhccccCcEEEEEee
Q 027039 163 PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
-...+....+.+.|+..++..+.
T Consensus 84 ~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 84 EAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEES
T ss_pred HHHHHHHHHHHHCCCCeEEEEEC
Confidence 11223345666788888664443
No 378
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=82.84 E-value=0.79 Score=38.66 Aligned_cols=110 Identities=10% Similarity=0.112 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCC--CeE-EEecCCCCC---------CeEEEcCCCCCCC---CCCceeEEEcc----
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGV--ADV-TGVELMDSL---------PLVSRADPHNLPF---FDEAFDVAFTA---- 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~--~~v-~~vD~s~~~---------~~~~~~d~~~~~~---~~~~fD~V~~~---- 155 (229)
+...+++|+-||.|.....+...|. ..+ .++|+++.. -.++.+|+.++.. +...+|+++..
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ 87 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQ 87 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCT
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCcc
Confidence 4456899999999999999998874 456 799999762 2256788887642 22368999965
Q ss_pred cc--hh-----hh-CHH-HHHHHHHh-c---c--ccCcEEEEEeecC-CcccHHHHHHHHhcCce
Q 027039 156 HL--AE-----AL-FPS-RFVGEMER-T---V--KIGGVCMVLMEEC-AGREIKQIVELFRTSRF 204 (229)
Q Consensus 156 ~~--~~-----~~-~~~-~~l~~~~~-~---L--kpgG~lil~~~~~-~~~~~~~l~~l~~~~~~ 204 (229)
.+ .. .. ++. .++.++.+ . + +|.-.++=.|..- .....+.+.+.+...+.
T Consensus 88 ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~GY 152 (327)
T 3qv2_A 88 PYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKNQY 152 (327)
T ss_dssp TCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHTTC
T ss_pred CcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhCCC
Confidence 22 11 11 332 45556555 4 4 4654433223221 12345666776765544
No 379
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=82.77 E-value=1.1 Score=37.79 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCCCe--------EEEcCCCCCCCC-CCceeEEEcc------cch--
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSLPL--------VSRADPHNLPFF-DEAFDVAFTA------HLA-- 158 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~~~--------~~~~d~~~~~~~-~~~fD~V~~~------~~~-- 158 (229)
.+.+++|+.||.|.++..+...|+..+.++|+++...+ ...+|+.++... -..+|+|+.. ...
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag~ 89 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGK 89 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCTTTCTTSC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCCCcchhcc
Confidence 35789999999999999999999878999999876221 226777665311 1358999986 111
Q ss_pred -hhh-CH----HHHHHHHHhccccCcEEEEEeecC----CcccHHHHHHHHhcCc
Q 027039 159 -EAL-FP----SRFVGEMERTVKIGGVCMVLMEEC----AGREIKQIVELFRTSR 203 (229)
Q Consensus 159 -~~~-~~----~~~l~~~~~~LkpgG~lil~~~~~----~~~~~~~l~~l~~~~~ 203 (229)
... ++ ..-+.++.+.++|.-.++=-|..- ....+..+.+.+...+
T Consensus 90 ~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G 144 (327)
T 2c7p_A 90 QKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELD 144 (327)
T ss_dssp CCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTT
T ss_pred cCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCC
Confidence 011 22 122334445578875544334432 1234566666666544
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=82.34 E-value=0.93 Score=37.66 Aligned_cols=85 Identities=19% Similarity=0.161 Sum_probs=53.1
Q ss_pred ccCCCCC-eEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEc-CC-CC--CCCCCCceeEEEc
Q 027039 92 SLLFNHS-KVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRA-DP-HN--LPFFDEAFDVAFT 154 (229)
Q Consensus 92 ~~~~~~~-~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~-d~-~~--~~~~~~~fD~V~~ 154 (229)
..++++. +||-+|+ | .|..+..++.. |. +|++++.+++..+ ++.. +. .+ .....+.+|+|+-
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEE
Confidence 3457775 8999997 3 37777777766 87 8999998866321 2211 11 01 0122347999886
Q ss_pred ccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 155 AHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
..-. ..+....+.+++||+++++
T Consensus 223 ~~g~------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGG------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTT------TTHHHHHHTEEEEEEEEEC
T ss_pred CCcH------HHHHHHHHhhccCCEEEEE
Confidence 4211 2467788899999998754
No 381
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=82.21 E-value=0.54 Score=34.48 Aligned_cols=39 Identities=13% Similarity=0.275 Sum_probs=30.1
Q ss_pred CCCCceeEEEccc-ch-h-hhCHHHHHHHHHhccccCcEEEE
Q 027039 144 FFDEAFDVAFTAH-LA-E-ALFPSRFVGEMERTVKIGGVCMV 182 (229)
Q Consensus 144 ~~~~~fD~V~~~~-~~-~-~~~~~~~l~~~~~~LkpgG~lil 182 (229)
+++++||.|+.-. -. . ...|.+++..+.+.|||||++.-
T Consensus 55 Lp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4679999998642 11 2 22679999999999999999774
No 382
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=82.02 E-value=2.6 Score=38.19 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=38.6
Q ss_pred CCceeEEEcc----cchhh-------h-CHHHHHHHHHhccccCcEEEEEeec-CCcccHHHHHHHHhcCceeEeee
Q 027039 146 DEAFDVAFTA----HLAEA-------L-FPSRFVGEMERTVKIGGVCMVLMEE-CAGREIKQIVELFRTSRFVDAAN 209 (229)
Q Consensus 146 ~~~fD~V~~~----~~~~~-------~-~~~~~l~~~~~~LkpgG~lil~~~~-~~~~~~~~l~~l~~~~~~~~~~~ 209 (229)
++.||+|+.| +-.|| . ...-+-....+.|||||.+++.... .|-.+..-+..+-++.++.++..
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRkF~~~rv~~ 295 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARKFVRVSAAR 295 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHTEEEEEEEC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhheeeeeeeC
Confidence 5799999998 11111 1 2233446788999999998755433 23223334555666666666554
No 383
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=81.89 E-value=1 Score=38.34 Aligned_cols=84 Identities=15% Similarity=0.065 Sum_probs=50.9
Q ss_pred CCCCCeEEEEcC-CC-ChhhHHHHhC-CCCeEEEecCCCCCCeE-------EEcCCCCCCC-----CCCceeEEEcccch
Q 027039 94 LFNHSKVLCVSA-GA-GHEVMAFNSI-GVADVTGVELMDSLPLV-------SRADPHNLPF-----FDEAFDVAFTAHLA 158 (229)
Q Consensus 94 ~~~~~~vLDiG~-G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~~-----~~~~fD~V~~~~~~ 158 (229)
++++.+||-.|+ |. |..+..++.. |. +|++++ ++...+. ...|..+..+ ..+.+|+|+-..-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence 688999999993 43 7777777766 86 898888 4442110 0111111110 11468998864211
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+...+....+.+++||+++.+
T Consensus 259 ----~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 259 ----STETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp ----THHHHGGGGBCSSSCCEEEES
T ss_pred ----hhhhhHHHHHhhcCCcEEEEe
Confidence 223456677889999998744
No 384
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.01 E-value=6.7 Score=30.29 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHHHhc
Q 027039 96 NHSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERT 173 (229)
Q Consensus 96 ~~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~ 173 (229)
..++|.=||+|. +.++..+++.|. +|+.+|.+++ .-...|+|+..--. ....++++++...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~~~--------------~~~~aD~vi~av~~--~~~~~v~~~l~~~ 80 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSKDQ--------------ATTLGEIVIMAVPY--PALAALAKQYATQ 80 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTCC--------------CSSCCSEEEECSCH--HHHHHHHHHTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHH--------------HhccCCEEEEcCCc--HHHHHHHHHHHHh
Confidence 467899999875 234445556676 8999998766 12357888874211 1234566677667
Q ss_pred cccCcEEEEEeecCCc-----------c-c-HHHHHHHHhcCceeE
Q 027039 174 VKIGGVCMVLMEECAG-----------R-E-IKQIVELFRTSRFVD 206 (229)
Q Consensus 174 LkpgG~lil~~~~~~~-----------~-~-~~~l~~l~~~~~~~~ 206 (229)
++ +.. ++.+...-. . . .+.+.+.+...++++
T Consensus 81 ~~-~~~-vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~~~vv~ 124 (209)
T 2raf_A 81 LK-GKI-VVDITNPLNFDTWDDLVVPADSSAAQELQQQLPDSQVLK 124 (209)
T ss_dssp HT-TSE-EEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTTSEEEE
T ss_pred cC-CCE-EEEECCCCCccccccccCCCCCcHHHHHHHHCCCCcEEE
Confidence 77 444 434433111 1 1 455666666555544
No 385
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=79.81 E-value=0.29 Score=41.20 Aligned_cols=84 Identities=10% Similarity=0.093 Sum_probs=53.3
Q ss_pred cCCCCCeEEEEcCCC-ChhhHHHHhC---CCCeEEEecCCCCCCe---------EEEcCC-CCC--CC-CCCceeEEEcc
Q 027039 93 LLFNHSKVLCVSAGA-GHEVMAFNSI---GVADVTGVELMDSLPL---------VSRADP-HNL--PF-FDEAFDVAFTA 155 (229)
Q Consensus 93 ~~~~~~~vLDiG~G~-G~~~~~l~~~---g~~~v~~vD~s~~~~~---------~~~~d~-~~~--~~-~~~~fD~V~~~ 155 (229)
.+ ++.+||-+|+|. |..+..+++. |. +|+++|.+++..+ ++..+- .+. .. ....+|+|+-.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEEC
Confidence 45 899999999965 6666666653 65 8999998865322 211100 000 01 12369999864
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.- ....++.+.+.|+|||+++++
T Consensus 246 ~g-----~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 246 VG-----TEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp SC-----CHHHHHHHHHHEEEEEEEEEC
T ss_pred CC-----ChHHHHHHHHHhhcCCEEEEe
Confidence 21 123678888999999998754
No 386
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.69 E-value=1.4 Score=36.89 Aligned_cols=35 Identities=20% Similarity=0.079 Sum_probs=32.1
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCC
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMD 129 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~ 129 (229)
..++..|||-=||+|..+.+....|. +.+|+|+++
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~ 274 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAP 274 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESST
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCc
Confidence 37899999999999999999888876 999999998
No 387
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.43 E-value=13 Score=30.83 Aligned_cols=110 Identities=12% Similarity=0.127 Sum_probs=65.6
Q ss_pred CCeEEEEcCCC--ChhhHHHHhCCCC-eEEEecCCCCCCe---------EEEcCCCCCCCCCCceeEEEcccchhhhCHH
Q 027039 97 HSKVLCVSAGA--GHEVMAFNSIGVA-DVTGVELMDSLPL---------VSRADPHNLPFFDEAFDVAFTAHLAEALFPS 164 (229)
Q Consensus 97 ~~~vLDiG~G~--G~~~~~l~~~g~~-~v~~vD~s~~~~~---------~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~ 164 (229)
..+|.=||+|. +.++..+.+.|.. +|+++|.+++..+ -...|..+. .-...|+|+..--.. ...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVilavp~~--~~~ 108 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLSSPVR--TFR 108 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEECSCGG--GHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEeCCHH--HHH
Confidence 36899999875 3455566666653 8999999875322 112222220 123579988742111 245
Q ss_pred HHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeeeee
Q 027039 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANVTV 212 (229)
Q Consensus 165 ~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 212 (229)
++++++...++||..++ -+........+.+.+.+.. +++..+-+.+
T Consensus 109 ~vl~~l~~~l~~~~iv~-d~~Svk~~~~~~~~~~l~~-~~v~~hPm~G 154 (314)
T 3ggo_A 109 EIAKKLSYILSEDATVT-DQGSVKGKLVYDLENILGK-RFVGGHPIAG 154 (314)
T ss_dssp HHHHHHHHHSCTTCEEE-ECCSCCTHHHHHHHHHHGG-GEECEEECCC
T ss_pred HHHHHHhhccCCCcEEE-ECCCCcHHHHHHHHHhcCC-CEEecCcccC
Confidence 67788888899887654 3333333345666666655 7777666554
No 388
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=78.29 E-value=10 Score=31.90 Aligned_cols=86 Identities=7% Similarity=0.112 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCC-----------------------------------CCCeEEEcC
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMD-----------------------------------SLPLVSRAD 138 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~-----------------------------------~~~~~~~~d 138 (229)
.+...|+.+|||.......+... +...++-+|..+ ....++.+|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 45678999999999999999875 334777777522 123366778
Q ss_pred CCCCCC---------CCCceeEEEcccchhhhCH---HHHHHHHHhccccCcEEE
Q 027039 139 PHNLPF---------FDEAFDVAFTAHLAEALFP---SRFVGEMERTVKIGGVCM 181 (229)
Q Consensus 139 ~~~~~~---------~~~~fD~V~~~~~~~~~~~---~~~l~~~~~~LkpgG~li 181 (229)
+.+..+ ..+...++++-.+...+.+ .++++.+.+.. |+|.++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 776321 2345677777666666655 45667777665 777765
No 389
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.98 E-value=8.3 Score=27.29 Aligned_cols=56 Identities=13% Similarity=0.085 Sum_probs=37.9
Q ss_pred CCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCC--------CCeEEEcCCCCCC----CCCCceeEEEcc
Q 027039 97 HSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS--------LPLVSRADPHNLP----FFDEAFDVAFTA 155 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~----~~~~~fD~V~~~ 155 (229)
..+|+=+|+| ..+..++ +.|. +|+++|.+++ ...++.+|..+.. ..-..+|+|+..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4679999985 4555444 4477 9999999875 3457788887632 123468988864
No 390
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=77.84 E-value=1.7 Score=37.83 Aligned_cols=85 Identities=16% Similarity=0.053 Sum_probs=53.4
Q ss_pred ccCCCCCeEEEEcC-C-CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEc---CCCCC--------------
Q 027039 92 SLLFNHSKVLCVSA-G-AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRA---DPHNL-------------- 142 (229)
Q Consensus 92 ~~~~~~~~vLDiG~-G-~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~---d~~~~-------------- 142 (229)
..++++.+||-.|+ | -|..+..++.. |. ++++++.+++..+ ++.. |..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhH
Confidence 56789999999997 3 26777777766 76 8888887655222 1111 11000
Q ss_pred ------CCCCCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 143 ------PFFDEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 143 ------~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
......+|+|+-+.-. ..++...+.+++||+++++
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G~------~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTGR------VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSCH------HHHHHHHHHSCTTCEEEES
T ss_pred HHHHHHHHhCCCceEEEECCCc------hHHHHHHHHHhcCCEEEEE
Confidence 0002468998864321 3567788899999998854
No 391
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=77.75 E-value=1.1 Score=37.78 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=44.1
Q ss_pred CeEEEEcCCCChhhHHHHhCCC--CeEEEecCCCCC----------CeEEEcCCCCCCC---CCCceeEEEcc
Q 027039 98 SKVLCVSAGAGHEVMAFNSIGV--ADVTGVELMDSL----------PLVSRADPHNLPF---FDEAFDVAFTA 155 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~~g~--~~v~~vD~s~~~----------~~~~~~d~~~~~~---~~~~fD~V~~~ 155 (229)
.+++|+-||.|.....+...|. ..+.++|+++.. ..++.+|+.++.. +...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 4799999999999999988775 568899998762 2366778877642 22368999975
No 392
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=77.72 E-value=2.2 Score=35.66 Aligned_cols=86 Identities=13% Similarity=0.221 Sum_probs=54.5
Q ss_pred ccCCCCCeEEEEcCCC--ChhhHHHHh-C-CCCeEEEecCCCCCCeE-------EEcCCCCCC-------CCC-CceeEE
Q 027039 92 SLLFNHSKVLCVSAGA--GHEVMAFNS-I-GVADVTGVELMDSLPLV-------SRADPHNLP-------FFD-EAFDVA 152 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~--G~~~~~l~~-~-g~~~v~~vD~s~~~~~~-------~~~d~~~~~-------~~~-~~fD~V 152 (229)
..++++.+||-.|+|+ |..+..++. . |. +|+++|.+++..+. ...|..+.. ..+ +.+|+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEE
Confidence 4578999999999984 445555544 4 76 89999987652210 111222211 112 479999
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+.+.- ....++...+.|+++|+++++
T Consensus 245 i~~~g-----~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 245 IDLNN-----SEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EESCC-----CHHHHTTGGGGEEEEEEEEEC
T ss_pred EECCC-----CHHHHHHHHHHHhcCCEEEEE
Confidence 86532 124577788999999998754
No 393
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=76.71 E-value=17 Score=28.71 Aligned_cols=54 Identities=7% Similarity=-0.010 Sum_probs=41.4
Q ss_pred CeEEEEcCCCChhhHHHHhC----CCCeEEEecCCCC--------CCeEEEcCCCCCCCCCCceeEEEccc
Q 027039 98 SKVLCVSAGAGHEVMAFNSI----GVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTAH 156 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~~----g~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~ 156 (229)
++||=.|+ |..+..+++. |+ +|++++.++. .++++.+|..++. -..+|.|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECC
Confidence 68999994 8877776543 76 9999988764 4568899998866 45789998763
No 394
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=75.81 E-value=1.4 Score=36.59 Aligned_cols=61 Identities=13% Similarity=0.213 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCCChhhHHHHhCCCCe--EEEecCCCCC----------CeEEEcCCCCCCCC----CCceeEEEcc
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSIGVAD--VTGVELMDSL----------PLVSRADPHNLPFF----DEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~g~~~--v~~vD~s~~~----------~~~~~~d~~~~~~~----~~~fD~V~~~ 155 (229)
+...+++|+=||.|.....+...|+.. +.++|+++.. ..+..+|+.++... .+.+|+++..
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 566799999999999999999888744 6899998762 23678888876421 1369999976
No 395
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.56 E-value=5.7 Score=29.66 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCC-Ch-hhHHHHhC-CCCeEEEecCCCC--------CCeEEEcCCCCCC----C-CCCceeEEEcccchh
Q 027039 96 NHSKVLCVSAGA-GH-EVMAFNSI-GVADVTGVELMDS--------LPLVSRADPHNLP----F-FDEAFDVAFTAHLAE 159 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~-~~~~l~~~-g~~~v~~vD~s~~--------~~~~~~~d~~~~~----~-~~~~fD~V~~~~~~~ 159 (229)
.+.+|+=+|+|. |. .+..|.+. |+ +|+++|.+++ ...++.+|..+.. . .-..+|+|+...-..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 366899998764 32 33344555 66 8999999875 2446677765421 1 134689888732111
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEe
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.....+-...+.+.|++.++..+
T Consensus 117 --~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 117 --QGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp --HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred --HHHHHHHHHHHHHCCCCEEEEEE
Confidence 11222334555566777766544
No 396
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=75.39 E-value=3.8 Score=38.73 Aligned_cols=86 Identities=21% Similarity=0.221 Sum_probs=55.3
Q ss_pred hcccCCCCCeEEEEcC--CCChhhHHHHhC-CCCeEEEecCCCCCCeEEE------cCCCCCCC--------CCCceeEE
Q 027039 90 GKSLLFNHSKVLCVSA--GAGHEVMAFNSI-GVADVTGVELMDSLPLVSR------ADPHNLPF--------FDEAFDVA 152 (229)
Q Consensus 90 ~~~~~~~~~~vLDiG~--G~G~~~~~l~~~-g~~~v~~vD~s~~~~~~~~------~d~~~~~~--------~~~~fD~V 152 (229)
....++++.+||-.|+ |-|..+..+++. |. +|++++.+++ .++.. .|..+..+ ....+|+|
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~k-~~~l~lga~~v~~~~~~~~~~~i~~~t~g~GvDvV 416 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDK-WQAVELSREHLASSRTCDFEQQFLGATGGRGVDVV 416 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGGG-GGGSCSCGGGEECSSSSTHHHHHHHHSCSSCCSEE
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChHH-hhhhhcChhheeecCChhHHHHHHHHcCCCCeEEE
Confidence 3456789999999995 348888888887 87 8999886553 11100 11111111 12468988
Q ss_pred EcccchhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 153 FTAHLAEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
+-..-. +.+++..+.|+|||+++.+
T Consensus 417 ld~~gg------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 417 LNSLAG------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp EECCCT------TTTHHHHTSCTTCEEEEEC
T ss_pred EECCCc------HHHHHHHHHhcCCCEEEEe
Confidence 863211 3457788999999998844
No 397
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.04 E-value=7.5 Score=31.74 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=57.1
Q ss_pred CCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEE-------EcCCCCCCCCCCceeEEEcccchhhhCHHHHH
Q 027039 97 HSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVS-------RADPHNLPFFDEAFDVAFTAHLAEALFPSRFV 167 (229)
Q Consensus 97 ~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~-------~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l 167 (229)
..+|.-||+|. | ..+..+++.|+ +|+++|.+++..+-. ..+..+. -. .|+|+..- .......+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~---~~-aDvvi~~v-p~~~~~~~v~ 88 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLADSVADV---AA-ADLIHITV-LDDAQVREVV 88 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEECSSHHHH---TT-SSEEEECC-SSHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEcCCHHHH---Hh-CCEEEEEC-CChHHHHHHH
Confidence 35899999886 3 34455566687 999999998854411 1111111 12 78888642 1111234566
Q ss_pred HHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 168 GEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 168 ~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
+++...++||..++ ..........+++.+.+..
T Consensus 89 ~~l~~~l~~g~ivv-~~st~~~~~~~~~~~~~~~ 121 (296)
T 3qha_A 89 GELAGHAKPGTVIA-IHSTISDTTAVELARDLKA 121 (296)
T ss_dssp HHHHTTCCTTCEEE-ECSCCCHHHHHHHHHHHGG
T ss_pred HHHHHhcCCCCEEE-EeCCCCHHHHHHHHHHHHH
Confidence 88888888877654 4444333344556665553
No 398
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=69.20 E-value=23 Score=28.05 Aligned_cols=56 Identities=18% Similarity=0.119 Sum_probs=39.7
Q ss_pred CCeEEEEcCCCChhhHHHHh----CCCCeEEEecCCCC----CCeEEEcCCCCCC----CCCCceeEEEcc
Q 027039 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS----LPLVSRADPHNLP----FFDEAFDVAFTA 155 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~----~g~~~v~~vD~s~~----~~~~~~~d~~~~~----~~~~~fD~V~~~ 155 (229)
+++||=.|+ |..+..+++ .|+ +|++++.++. .+.++.+|+.+.. ..++.+|+|+..
T Consensus 3 ~~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 3 LSKILIAGC--GDLGLELARRLTAQGH-EVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-EEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 468999983 777777654 376 9999987754 5668889987643 112359999875
No 399
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=68.78 E-value=4.8 Score=34.06 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCC--CChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCCCCC-----CCCCceeEEEcccc
Q 027039 95 FNHSKVLCVSAG--AGHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPHNLP-----FFDEAFDVAFTAHL 157 (229)
Q Consensus 95 ~~~~~vLDiG~G--~G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~~~~-----~~~~~fD~V~~~~~ 157 (229)
+++.+||=+|++ .|..+..+++. |. +|+++. ++...+ ++...-.++. ..++.+|+|+-..-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC
Confidence 788999999984 47888888876 87 888874 554222 2221111110 12345898885321
Q ss_pred hhhhCHHHHHHHHHhcc-ccCcEEEEE
Q 027039 158 AEALFPSRFVGEMERTV-KIGGVCMVL 183 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~L-kpgG~lil~ 183 (229)
....+....+.| ++||+++++
T Consensus 241 -----~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 241 -----NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp -----SHHHHHHHHHHSCTTCEEEEES
T ss_pred -----chHHHHHHHHHhhcCCCEEEEE
Confidence 124566777788 699998754
No 400
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=67.82 E-value=18 Score=25.97 Aligned_cols=84 Identities=8% Similarity=-0.012 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCChhhHHHHh----CCCCeEEEecCCCC------------CCeEEEcCCCCCC----CCCCceeEEEccc
Q 027039 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS------------LPLVSRADPHNLP----FFDEAFDVAFTAH 156 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~----~g~~~v~~vD~s~~------------~~~~~~~d~~~~~----~~~~~fD~V~~~~ 156 (229)
..+|+=+|+ |..+..+++ .|. +|+.+|.++. ...++.+|..+.. ..-...|.|++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 456787876 566665543 466 8999998741 3568889887631 1124688888742
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEee
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
-.. .....+....+.+.|..+++..+.
T Consensus 80 ~~d--~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 80 DND--ADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SCH--HHHHHHHHHHHHHTSSSCEEEECS
T ss_pred CCh--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 111 123345556666777777665443
No 401
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=67.81 E-value=23 Score=29.24 Aligned_cols=88 Identities=11% Similarity=0.020 Sum_probs=56.6
Q ss_pred CCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC------------------CCeEEEcCCCCCC---------CCCCce
Q 027039 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS------------------LPLVSRADPHNLP---------FFDEAF 149 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~------------------~~~~~~~d~~~~~---------~~~~~f 149 (229)
...|+++|||-=.-...+..-....++-+|. |. ...++.+|+.+ . +..+.-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 3579999999877766665322247888884 32 12377788775 2 222334
Q ss_pred eEEEcccchhhhC---HHHHHHHHHhccccCcEEEEEeec
Q 027039 150 DVAFTAHLAEALF---PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 150 D~V~~~~~~~~~~---~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
-++++-.+..++. ..++++.+...+.||+.+++-...
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 4555556666663 466888888888899987765543
No 402
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=67.71 E-value=6.9 Score=31.04 Aligned_cols=90 Identities=16% Similarity=0.081 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCCC----------CCCceeE
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLPF----------FDEAFDV 151 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~~----------~~~~fD~ 151 (229)
.+.++|=.|++.| ..+..|++.|. +|+.+|.+++ .+.++++|+.+..- .-+..|+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678888887766 34555666687 8999988754 34577888877420 0147899
Q ss_pred EEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 152 AFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++.+.-. .... +..+.+.+.+.++.+|.++.+.+.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 9987211 0001 123456677777888988766543
No 403
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=67.56 E-value=4.3 Score=32.95 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=45.3
Q ss_pred CCeEEEEcCCC----Ch--hhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHH
Q 027039 97 HSKVLCVSAGA----GH--EVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEM 170 (229)
Q Consensus 97 ~~~vLDiG~G~----G~--~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~ 170 (229)
..+||-|| |+ |. +...|.+.|+ +|+.++...... +..++ ..||+|+...+....-....++.+
T Consensus 4 m~~vLiV~-g~~~~~~a~~l~~aL~~~g~-~V~~i~~~~~~~-----~~~~L----~~yDvIIl~d~~~~~l~~~~~~~L 72 (259)
T 3rht_A 4 MTRVLYCG-DTSLETAAGYLAGLMTSWQW-EFDYIPSHVGLD-----VGELL----AKQDLVILSDYPAERMTAQAIDQL 72 (259)
T ss_dssp --CEEEEE-SSCTTTTHHHHHHHHHHTTC-CCEEECTTSCBC-----SSHHH----HTCSEEEEESCCGGGBCHHHHHHH
T ss_pred CceEEEEC-CCCchhHHHHHHHHHHhCCc-eEEEeccccccc-----ChhHH----hcCCEEEEcCCccccCCHHHHHHH
Confidence 35788886 33 22 3334555576 666665543211 11111 589999987544333234677778
Q ss_pred HhccccCcEEEEEeec
Q 027039 171 ERTVKIGGVCMVLMEE 186 (229)
Q Consensus 171 ~~~LkpgG~lil~~~~ 186 (229)
.+.++.||-++++-..
T Consensus 73 ~~yV~~GGgLi~~gG~ 88 (259)
T 3rht_A 73 VTMVKAGCGLVMLGGW 88 (259)
T ss_dssp HHHHHTTCEEEEECST
T ss_pred HHHHHhCCeEEEecCc
Confidence 8888889988866443
No 404
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=67.16 E-value=6.4 Score=32.41 Aligned_cols=103 Identities=19% Similarity=0.111 Sum_probs=57.4
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCC------CCeEEE--cCCC--CC-----CCCCCceeEEEcccchhh
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDS------LPLVSR--ADPH--NL-----PFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~------~~~~~~--~d~~--~~-----~~~~~~fD~V~~~~~~~~ 160 (229)
++|+=||+|. +.++..|++.|. +|+.++.++. .+.... ++.. .. +-.-..+|+|+..--..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~~- 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKTF- 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCCC-
Confidence 5788999997 345666677776 8999988751 111111 0100 00 00013689988742111
Q ss_pred hCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 161 LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 161 ~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
...++++++...++|+..++.+... -...+.+.+.|...+.+
T Consensus 81 -~~~~~l~~l~~~l~~~~~iv~l~nG--i~~~~~l~~~~~~~~v~ 122 (312)
T 3hn2_A 81 -ANSRYEELIRPLVEEGTQILTLQNG--LGNEEALATLFGAERII 122 (312)
T ss_dssp -GGGGHHHHHGGGCCTTCEEEECCSS--SSHHHHHHHHTCGGGEE
T ss_pred -CcHHHHHHHHhhcCCCCEEEEecCC--CCcHHHHHHHCCCCcEE
Confidence 1346788888899988765533322 22345677777655443
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=66.76 E-value=11 Score=32.57 Aligned_cols=85 Identities=13% Similarity=-0.056 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCC--------CCeEEEcCCCCCC----CCCCceeEEEcccchh
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS--------LPLVSRADPHNLP----FFDEAFDVAFTAHLAE 159 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~----~~~~~fD~V~~~~~~~ 159 (229)
.+.+|+=+|+| .++..++ +.|. .|+++|.+++ ...++.+|+.+.. ..-...|+|++..-..
T Consensus 3 ~~~~viIiG~G--r~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~ 79 (413)
T 3l9w_A 3 HGMRVIIAGFG--RFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP 79 (413)
T ss_dssp -CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSH
T ss_pred CCCeEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCCh
Confidence 45678888876 4555444 4476 9999999977 3457889988732 1235688887632111
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEee
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
.....+....+.+.|+..+++-+.
T Consensus 80 --~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 80 --QTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp --HHHHHHHHHHHHHCTTCEEEEEES
T ss_pred --HHHHHHHHHHHHhCCCCeEEEEEC
Confidence 123345566677788888665444
No 406
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=66.41 E-value=2.7 Score=36.48 Aligned_cols=34 Identities=21% Similarity=0.369 Sum_probs=26.4
Q ss_pred CCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCC
Q 027039 96 NHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDS 130 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~ 130 (229)
++.+|+-+|+|. |..+..++.. |. +|+++|.++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHH
Confidence 578999999985 5555555544 87 9999999987
No 407
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=65.78 E-value=17 Score=28.30 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCCh---hhHHHHhCCCCeEEEecCCCC----CCeEEEcCCCCCC--------CCCCceeEEEcccch--
Q 027039 96 NHSKVLCVSAGAGH---EVMAFNSIGVADVTGVELMDS----LPLVSRADPHNLP--------FFDEAFDVAFTAHLA-- 158 (229)
Q Consensus 96 ~~~~vLDiG~G~G~---~~~~l~~~g~~~v~~vD~s~~----~~~~~~~d~~~~~--------~~~~~fD~V~~~~~~-- 158 (229)
.+.++|=.|++.|. .+..|++.+...|+.+|.++. .+.++++|+.+.. ...+..|+++.+.-.
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~ 82 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILI 82 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCC
Confidence 45678888877662 444555532338888887665 3457788887631 224579999987211
Q ss_pred ----hhhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 159 ----EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 ----~~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
...+ +..+.+.+.+.++.+|.++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~ 128 (244)
T 4e4y_A 83 KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSD 128 (244)
T ss_dssp CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCG
T ss_pred CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCH
Confidence 0011 233456666777778887766543
No 408
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=64.37 E-value=6.3 Score=31.55 Aligned_cols=83 Identities=18% Similarity=0.093 Sum_probs=49.2
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEEcCC---C--------CCCCCCCceeEEEcccchhhhCHH
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADP---H--------NLPFFDEAFDVAFTAHLAEALFPS 164 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~---~--------~~~~~~~~fD~V~~~~~~~~~~~~ 164 (229)
++|.=||+|. +..+..+++.|+ +|+.+|.++...+-+.... . +.+-.-..+|+|+..--.. ...
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~--~~~ 77 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW--QVS 77 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG--GHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH--hHH
Confidence 3678888875 234455566677 9999999877544222110 0 0000012578888742222 246
Q ss_pred HHHHHHHhccccCcEEEEE
Q 027039 165 RFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 165 ~~l~~~~~~LkpgG~lil~ 183 (229)
++++++...++|+..++.+
T Consensus 78 ~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 78 DAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp HHHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHHhhCCCCCEEEEe
Confidence 7788888889888876644
No 409
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=63.50 E-value=17 Score=29.52 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=54.3
Q ss_pred CCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCe--------EEEcCCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 97 HSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPL--------VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 97 ~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~--------~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
.++|.=||+|. +..+..+++.|+ +|+++|.+++..+ ....+..+. -...|+|+..- ........+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~---~~~aDvvi~~v-p~~~~~~~v 81 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAREF---AGVVDALVILV-VNAAQVRQV 81 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTTT---TTTCSEEEECC-SSHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHHH---HhcCCEEEEEC-CCHHHHHHH
Confidence 46899998875 234445566687 9999999876322 112333332 13579888742 110112333
Q ss_pred H---HHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 167 V---GEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 167 l---~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
+ +++...++||..++ ............+.+....
T Consensus 82 ~~~~~~l~~~l~~g~ivv-~~st~~~~~~~~~~~~~~~ 118 (303)
T 3g0o_A 82 LFGEDGVAHLMKPGSAVM-VSSTISSADAQEIAAALTA 118 (303)
T ss_dssp HC--CCCGGGSCTTCEEE-ECSCCCHHHHHHHHHHHHT
T ss_pred HhChhhHHhhCCCCCEEE-ecCCCCHHHHHHHHHHHHH
Confidence 3 45566777776644 4444333344555555554
No 410
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=63.06 E-value=4.6 Score=32.98 Aligned_cols=84 Identities=10% Similarity=-0.009 Sum_probs=49.6
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEEcCCC------CCCCC--CCceeEEEcccchhhhCHHHHH
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPH------NLPFF--DEAFDVAFTAHLAEALFPSRFV 167 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~------~~~~~--~~~fD~V~~~~~~~~~~~~~~l 167 (229)
++|+=||+|. +.++..|++.|. +|+.++.+++.++....+.. ..+.+ ...+|+|+..- ......+++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilav--k~~~~~~~l 79 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAV--KTHQLDAVI 79 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECS--CGGGHHHHG
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeC--CccCHHHHH
Confidence 5788999986 355555666676 88999887654443211110 00011 25789988641 111345677
Q ss_pred HHHHhccccCcEEEEEe
Q 027039 168 GEMERTVKIGGVCMVLM 184 (229)
Q Consensus 168 ~~~~~~LkpgG~lil~~ 184 (229)
+++...++++..++.+.
T Consensus 80 ~~l~~~l~~~~~iv~~~ 96 (294)
T 3g17_A 80 PHLTYLAHEDTLIILAQ 96 (294)
T ss_dssp GGHHHHEEEEEEEEECC
T ss_pred HHHHHhhCCCCEEEEec
Confidence 77888888777655333
No 411
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=62.41 E-value=15 Score=29.40 Aligned_cols=98 Identities=15% Similarity=0.038 Sum_probs=55.2
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe------EEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHH
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL------VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGE 169 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~------~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~ 169 (229)
++|.=||+|. | ..+..+.. |+ +|+.+|.+++..+ ....+..+. -...|+|+..--.. .....++++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~D~vi~~v~~~-~~~~~v~~~ 75 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEAVPLER---VAEARVIFTCLPTT-REVYEVAEA 75 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEECCGGG---GGGCSEEEECCSSH-HHHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCcccCHHHH---HhCCCEEEEeCCCh-HHHHHHHHH
Confidence 3678889886 3 34555667 77 8999998876322 111111111 13689988742111 113345677
Q ss_pred HHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 170 ~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
+...+++|..++ ........+.+.+.+.++..
T Consensus 76 l~~~l~~~~~vv-~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 76 LYPYLREGTYWV-DATSGEPEASRRLAERLREK 107 (289)
T ss_dssp HTTTCCTTEEEE-ECSCCCHHHHHHHHHHHHTT
T ss_pred HHhhCCCCCEEE-ECCCCCHHHHHHHHHHHHHc
Confidence 777788776544 44443333455677776643
No 412
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=61.15 E-value=23 Score=28.91 Aligned_cols=100 Identities=12% Similarity=0.061 Sum_probs=50.8
Q ss_pred eEEEEcCCCC--hhhHHHHhCCCCeEEEecCCCCCCeE-------EEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHH
Q 027039 99 KVLCVSAGAG--HEVMAFNSIGVADVTGVELMDSLPLV-------SRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGE 169 (229)
Q Consensus 99 ~vLDiG~G~G--~~~~~l~~~g~~~v~~vD~s~~~~~~-------~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~ 169 (229)
+|-=||.|.= ..+..|.+.|+ +|++.|.+++..+- ...+..+. -..-|+|++.-......-..+..+
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~~~~s~~e~---~~~~dvvi~~l~~~~~~~~v~~~~ 82 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKLGATVVENAIDA---ITPGGIVFSVLADDAAVEELFSME 82 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTTTCEECSSGGGG---CCTTCEEEECCSSHHHHHHHSCHH
T ss_pred cEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCeEeCCHHHH---HhcCCceeeeccchhhHHHHHHHH
Confidence 6777888762 34445566688 99999998875431 11122221 235688887421111001112345
Q ss_pred HHhccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 170 ~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
+...+++|+.++ -.........+++.+.+...+
T Consensus 83 ~~~~~~~~~iii-d~sT~~p~~~~~~~~~~~~~g 115 (297)
T 4gbj_A 83 LVEKLGKDGVHV-SMSTISPETSRQLAQVHEWYG 115 (297)
T ss_dssp HHHHHCTTCEEE-ECSCCCHHHHHHHHHHHHHTT
T ss_pred HHhhcCCCeEEE-ECCCCChHHHHHHHHHHHhcC
Confidence 777888888754 444444555666776666444
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=60.92 E-value=27 Score=27.74 Aligned_cols=99 Identities=12% Similarity=0.085 Sum_probs=53.6
Q ss_pred eEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCe---------EEEcCCCCCCCCCCceeEEEcccchhhhCHHHHH
Q 027039 99 KVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPL---------VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV 167 (229)
Q Consensus 99 ~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~---------~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l 167 (229)
+|.=||+|. +.++..+.+.|+ +|+++|.+++..+ ....+..+. ...|+|+..--.. ...+++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~av~~~--~~~~~~ 74 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLCTPIQ--LILPTL 74 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGGGG----TTCSEEEECSCHH--HHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCCHHHh----CCCCEEEEECCHH--HHHHHH
Confidence 677888875 234444555577 8999998865221 111222221 4689988742111 235567
Q ss_pred HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEe
Q 027039 168 GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDA 207 (229)
Q Consensus 168 ~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~ 207 (229)
.++...++||..++ .+........+.+.+.+. +++..
T Consensus 75 ~~l~~~~~~~~~vv-~~~~~~~~~~~~~~~~~~--~~~~~ 111 (279)
T 2f1k_A 75 EKLIPHLSPTAIVT-DVASVKTAIAEPASQLWS--GFIGG 111 (279)
T ss_dssp HHHGGGSCTTCEEE-ECCSCCHHHHHHHHHHST--TCEEE
T ss_pred HHHHhhCCCCCEEE-ECCCCcHHHHHHHHHHhC--CEeec
Confidence 77878888877644 443322223344444333 44443
No 414
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=60.86 E-value=15 Score=30.22 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=57.8
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCC------CCeEEE---cCC--------CCCCCCCCceeEEEcccch
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDS------LPLVSR---ADP--------HNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~------~~~~~~---~d~--------~~~~~~~~~fD~V~~~~~~ 158 (229)
++|+=||+|. +.++..|++.|. +|+.++.++. .+.... ++. .+..-....+|+|+..--.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 5789999986 455666666676 9999988752 001110 000 0110111368999874211
Q ss_pred hhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 159 EALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
. ...++++++...++++..++.+...-+ ..+.+.+.|.....
T Consensus 82 ~--~~~~~l~~l~~~l~~~t~Iv~~~nGi~--~~~~l~~~~~~~~v 123 (320)
T 3i83_A 82 V--EGADRVGLLRDAVAPDTGIVLISNGID--IEPEVAAAFPDNEV 123 (320)
T ss_dssp C--TTCCHHHHHTTSCCTTCEEEEECSSSS--CSHHHHHHSTTSCE
T ss_pred C--ChHHHHHHHHhhcCCCCEEEEeCCCCC--hHHHHHHHCCCCcE
Confidence 1 123577888888998887654443322 23567777765443
No 415
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=60.76 E-value=39 Score=26.33 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=53.1
Q ss_pred CCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCCCCe--EEEcCCCCCC----------CCCCceeEEEcccch---
Q 027039 97 HSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDSLPL--VSRADPHNLP----------FFDEAFDVAFTAHLA--- 158 (229)
Q Consensus 97 ~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~~~~--~~~~d~~~~~----------~~~~~fD~V~~~~~~--- 158 (229)
+.++|=.|++.| ..+..|++.|. +|+++|.++.... .+..|+.+.. -..+..|+++.+.-.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~ 100 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSG 100 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC
Confidence 567888887765 34444556687 8999998876432 4455544421 113578999987321
Q ss_pred ----hhhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 159 ----EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 ----~~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.... +..+++.+.+.++++|+++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 146 (251)
T 3orf_A 101 GNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS 146 (251)
T ss_dssp BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred CCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence 1010 123456666777788888866543
No 416
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=60.27 E-value=14 Score=30.10 Aligned_cols=72 Identities=11% Similarity=0.074 Sum_probs=45.6
Q ss_pred CeEEEEc-CCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHHHhcc
Q 027039 98 SKVLCVS-AGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERTV 174 (229)
Q Consensus 98 ~~vLDiG-~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~L 174 (229)
.+|.=|| +|. +.++..+++.|+ +|+++|.++.. +..+ .-...|+|+..--.. ...+++.++...+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~~~~------~~~~---~~~~aDvVilavp~~--~~~~vl~~l~~~l 89 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWA------VAES---ILANADVVIVSVPIN--LTLETIERLKPYL 89 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGG------GHHH---HHTTCSEEEECSCGG--GHHHHHHHHGGGC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECCccc------CHHH---HhcCCCEEEEeCCHH--HHHHHHHHHHhhc
Confidence 4799998 885 445555666677 89999987642 1111 013578888742111 2566778888888
Q ss_pred ccCcEEE
Q 027039 175 KIGGVCM 181 (229)
Q Consensus 175 kpgG~li 181 (229)
+|+..++
T Consensus 90 ~~~~iv~ 96 (298)
T 2pv7_A 90 TENMLLA 96 (298)
T ss_dssp CTTSEEE
T ss_pred CCCcEEE
Confidence 8887544
No 417
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=58.68 E-value=6.1 Score=33.56 Aligned_cols=103 Identities=10% Similarity=0.013 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEE-Ec------CCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVS-RA------DPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~-~~------d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
..++|.=||+|. | ..+..+++.|+ +|+++|.+++..+-. .. +..+.--.....|+|+..--.. ...++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~--~v~~v 97 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA--VVDSM 97 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG--GHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH--HHHHH
Confidence 457899999875 2 34445566687 999999987633211 00 1111000012349888742221 35667
Q ss_pred HHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 167 VGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 167 l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
+.++...+++|..++ ...........++.+.+...
T Consensus 98 l~~l~~~l~~g~iiI-d~st~~~~~~~~~~~~l~~~ 132 (358)
T 4e21_A 98 LQRMTPLLAANDIVI-DGGNSHYQDDIRRADQMRAQ 132 (358)
T ss_dssp HHHHGGGCCTTCEEE-ECSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHhhCCCCCEEE-eCCCCChHHHHHHHHHHHHC
Confidence 788888898877644 44333323344555555543
No 418
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=58.55 E-value=22 Score=28.26 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC--------------------------CCeEEEcCCCCCC---
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS--------------------------LPLVSRADPHNLP--- 143 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~--------------------------~~~~~~~d~~~~~--- 143 (229)
.+.++|=.|++.| ..+..|++.|. +|+.+|.+.. .+.++++|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 4678888888776 34555666787 8999887621 2347788887632
Q ss_pred --CC-----CCceeEEEcccchh----hhC--------------HHHHHHHHHhccccCcEEEEEee
Q 027039 144 --FF-----DEAFDVAFTAHLAE----ALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 144 --~~-----~~~fD~V~~~~~~~----~~~--------------~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+. -+..|+++.+.-.. ... +..+.+.+.+.++.+|.++.+.+
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 10 13789999872110 010 23445667777788898776544
No 419
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=57.97 E-value=21 Score=28.73 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC-----CC-----CC
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----FF-----DE 147 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~~-----~~ 147 (229)
.+.++|=.|++.| ..+..|++.|. +|+.+|.+.. .+.++++|+.+.. +. -+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678888888766 34555666687 8888887653 3447788887632 10 14
Q ss_pred ceeEEEcccc-h------hhhC--------------HHHHHHHHHhccccCcEEEEEee
Q 027039 148 AFDVAFTAHL-A------EALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 148 ~fD~V~~~~~-~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
..|+++.+.- . .... +..+.+.+.+.++.+|+++.+.+
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 6899987621 0 0001 13455677777888998776544
No 420
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=57.42 E-value=6.3 Score=33.42 Aligned_cols=38 Identities=11% Similarity=0.062 Sum_probs=27.2
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
...+++..+.++|+|||+++++.-. .-+.+-++..|+.
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFH--SLEDRiVK~~f~~ 289 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFH--SLEDRIVKRFMRE 289 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecC--chhHHHHHHHHHH
Confidence 3578899999999999998866544 2233446677774
No 421
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=57.34 E-value=4.2 Score=33.81 Aligned_cols=97 Identities=16% Similarity=0.010 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCChhhHHH----HhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHH-HHH
Q 027039 96 NHSKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GEM 170 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l----~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l-~~~ 170 (229)
.+.+|.=||+| ..+..+ ...|. +|+++|.++.... .+..++.-.-...|+|+..--.. .....++ .+.
T Consensus 143 ~g~~vgIIG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~~---~~~~~l~ell~~aDvV~l~~p~~-~~t~~li~~~~ 215 (311)
T 2cuk_A 143 QGLTLGLVGMG--RIGQAVAKRALAFGM-RVVYHARTPKPLP---YPFLSLEELLKEADVVSLHTPLT-PETHRLLNRER 215 (311)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCSSS---SCBCCHHHHHHHCSEEEECCCCC-TTTTTCBCHHH
T ss_pred CCCEEEEEEEC--HHHHHHHHHHHHCCC-EEEEECCCCcccc---cccCCHHHHHhhCCEEEEeCCCC-hHHHhhcCHHH
Confidence 46788889876 444444 34476 8999999876544 11111110013579988751100 0001111 234
Q ss_pred HhccccCcEEEEEeecCCcccHHHHHHHHh
Q 027039 171 ERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (229)
Q Consensus 171 ~~~LkpgG~lil~~~~~~~~~~~~l~~l~~ 200 (229)
...+|||..++ .+.....-+...+.+.++
T Consensus 216 l~~mk~ga~li-n~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 216 LFAMKRGAILL-NTARGALVDTEALVEALR 244 (311)
T ss_dssp HTTSCTTCEEE-ECSCGGGBCHHHHHHHHT
T ss_pred HhhCCCCcEEE-ECCCCCccCHHHHHHHHh
Confidence 46789988766 555544445566777776
No 422
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=57.02 E-value=20 Score=29.16 Aligned_cols=90 Identities=17% Similarity=0.078 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC-----------CCeEEEcCCCCCC-----C-----CCCceeE
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS-----------LPLVSRADPHNLP-----F-----FDEAFDV 151 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~-----------~~~~~~~d~~~~~-----~-----~~~~fD~ 151 (229)
.+..+|--|++.| ..+..|++.|. +|+.+|.+++ ....+++|+.+.. + .-+..|+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5778888888887 35666777787 9999998865 2346788887632 0 1257899
Q ss_pred EEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 152 AFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 152 V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
++.|.-. ...+ +..+.+.+.+.++.+|.++.+.+.
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 9887210 0001 234457778888899987766544
No 423
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=56.86 E-value=3.5 Score=34.04 Aligned_cols=103 Identities=7% Similarity=-0.012 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccch-hhhCHHHH-HHHHH
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLA-EALFPSRF-VGEME 171 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~-~~~~~~~~-l~~~~ 171 (229)
.+.+|.=||.|. | ..+..+...|. +|+++|.++....... ...++.-.-...|+|+..--. .. -..+ -.+..
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~-~~~~l~ell~~aDiV~l~~P~t~~--t~~li~~~~l 196 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNVDV-ISESPADLFRQSDFVLIAIPLTDK--TRGMVNSRLL 196 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTCSE-ECSSHHHHHHHCSEEEECCCCCTT--TTTCBSHHHH
T ss_pred ecchheeeccCchhHHHHHHHHhhCc-EEEEEecccccccccc-ccCChHHHhhccCeEEEEeecccc--chhhhhHHHH
Confidence 367899998874 3 23333334487 9999999876443211 011111001367888874110 00 0111 14567
Q ss_pred hccccCcEEEEEeecCCcccHHHHHHHHhcCc
Q 027039 172 RTVKIGGVCMVLMEECAGREIKQIVELFRTSR 203 (229)
Q Consensus 172 ~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~ 203 (229)
..+|||..++ -+.....-+.+.+.+.++..+
T Consensus 197 ~~mk~gailI-N~aRG~~vd~~aL~~aL~~g~ 227 (290)
T 3gvx_A 197 ANARKNLTIV-NVARADVVSKPDMIGFLKERS 227 (290)
T ss_dssp TTCCTTCEEE-ECSCGGGBCHHHHHHHHHHCT
T ss_pred hhhhcCceEE-EeehhcccCCcchhhhhhhcc
Confidence 7889999866 555555556667777776544
No 424
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=56.78 E-value=7.1 Score=32.18 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=27.6
Q ss_pred CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 162 FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 162 ~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
...+++..+.++|+|||++++++-. .-+.+-++..|+.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH--SLEDRiVK~~~~~ 248 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH--SLEDRVVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC--cHHHHHHHHHHHh
Confidence 3578899999999999998865544 2233456677775
No 425
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=56.38 E-value=14 Score=30.86 Aligned_cols=87 Identities=15% Similarity=0.137 Sum_probs=55.6
Q ss_pred ccCCCCCeEEEEcCCC-ChhhHHHHhC-CCCeEEEecCCCCCCe---------EEEcCCC-CC--CCCCCceeEEEcccc
Q 027039 92 SLLFNHSKVLCVSAGA-GHEVMAFNSI-GVADVTGVELMDSLPL---------VSRADPH-NL--PFFDEAFDVAFTAHL 157 (229)
Q Consensus 92 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~---------~~~~d~~-~~--~~~~~~fD~V~~~~~ 157 (229)
..++++.+||-+|+|. |..+..+++. |. +|+++|.++...+ ++..+-. +. ... +.+|+|+-..-
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 4568999999999864 6777777776 87 7999998877432 2211111 10 011 47999986421
Q ss_pred hhhhCHHHHHHHHHhccccCcEEEEE
Q 027039 158 AEALFPSRFVGEMERTVKIGGVCMVL 183 (229)
Q Consensus 158 ~~~~~~~~~l~~~~~~LkpgG~lil~ 183 (229)
.. ....++...+.|++||+++.+
T Consensus 253 ~~---~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 253 SL---TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CS---TTCCTTTGGGGEEEEEEEEEC
T ss_pred CC---cHHHHHHHHHHhcCCCEEEEe
Confidence 10 012355677899999998754
No 426
>1q90_R Cytochrome B6-F complex iron-sulfur subunit; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.12.1
Probab=55.74 E-value=19 Score=21.26 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 027039 6 EALLRKISYGAITIATFTLVML 27 (229)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~l~~~ 27 (229)
++|||.+++...+..++.+++.
T Consensus 12 Rqfln~l~~G~~a~~a~~~~~P 33 (49)
T 1q90_R 12 RNIMNLILAGGAGLPITTLALG 33 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999999888877766653
No 427
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=55.51 E-value=4.7 Score=33.97 Aligned_cols=102 Identities=10% Similarity=0.017 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCe-----EEEcCCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPL-----VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~-----~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
.+.+|.=||.| ..+..++ ..|. +|+++|.++.... ....+..++ -...|+|+..--.. ..-..+
T Consensus 164 ~g~tvgIIGlG--~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~P~t-~~t~~l 236 (335)
T 2g76_A 164 NGKTLGILGLG--RIGREVATRMQSFGM-KTIGYDPIISPEVSASFGVQQLPLEEI---WPLCDFITVHTPLL-PSTTGL 236 (335)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTTC-EEEEECSSSCHHHHHHTTCEECCHHHH---GGGCSEEEECCCCC-TTTTTS
T ss_pred CcCEEEEEeEC--HHHHHHHHHHHHCCC-EEEEECCCcchhhhhhcCceeCCHHHH---HhcCCEEEEecCCC-HHHHHh
Confidence 56789999876 4444443 3476 8999998765311 111111111 13678888751100 000111
Q ss_pred H-HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 167 V-GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 167 l-~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
+ .+....+|||+.++ -+....--+...+.+.++..++.
T Consensus 237 i~~~~l~~mk~gailI-N~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 237 LNDNTFAQCKKGVRVV-NCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp BCHHHHTTSCTTEEEE-ECSCTTSBCHHHHHHHHHHTSEE
T ss_pred hCHHHHhhCCCCcEEE-ECCCccccCHHHHHHHHHhCCcc
Confidence 2 35667889988766 56555555666777777765544
No 428
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=55.02 E-value=4.6 Score=33.86 Aligned_cols=101 Identities=12% Similarity=0.149 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe----EEE-cCCCCCCCCCCceeEEEccc--ch--hhhCHH
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL----VSR-ADPHNLPFFDEAFDVAFTAH--LA--EALFPS 164 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~----~~~-~d~~~~~~~~~~fD~V~~~~--~~--~~~~~~ 164 (229)
.+.+|.=||.|. | ..+..+...|. +|+++|.++...+ ... .+..++ -...|+|+..- .. .++.
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~el---l~~aDvV~l~lPlt~~t~~li-- 209 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTGHPADHFHETVAFTATADA---LATANFIVNALPLTPTTHHLF-- 209 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCCCCTTCSEEEEGGGCHHH---HHHCSEEEECCCCCGGGTTCB--
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCCcchhHhHhhccccCCHHHH---HhhCCEEEEcCCCchHHHHhc--
Confidence 367888898874 2 23333344477 9999998866432 111 122111 13578888741 11 1111
Q ss_pred HHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 165 ~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
-.+....+|||..++ -+.....-+.+.+.+.++..++.
T Consensus 210 --~~~~l~~mk~gailI-N~aRG~~vd~~aL~~aL~~g~i~ 247 (324)
T 3evt_A 210 --STELFQQTKQQPMLI-NIGRGPAVDTTALMTALDHHQLS 247 (324)
T ss_dssp --SHHHHHTCCSCCEEE-ECSCGGGBCHHHHHHHHHTTSCS
T ss_pred --CHHHHhcCCCCCEEE-EcCCChhhhHHHHHHHHHhCCce
Confidence 134567789988866 66665556677788888766554
No 429
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=54.47 E-value=30 Score=28.78 Aligned_cols=121 Identities=15% Similarity=0.080 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe-----------------EEEcCC------------CCCCC
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL-----------------VSRADP------------HNLPF 144 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~-----------------~~~~d~------------~~~~~ 144 (229)
...+|.-||+|+ | .++..++..|+ +|+..|++++.++ ...+.. .++.-
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 346899999997 3 35556667788 9999999976221 000000 00000
Q ss_pred CCCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeeeeecCCeeEEEEE
Q 027039 145 FDEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANVTVNGSNMTRILM 222 (229)
Q Consensus 145 ~~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 222 (229)
.-...|+|+=. +.+-+ -..++++++.++++|+..+. +.....+..++.+..+ ..+++..+ +-++-..|+.+-.
T Consensus 84 a~~~ad~ViEa-v~E~l~iK~~lf~~l~~~~~~~aIla---SNTSsl~is~ia~~~~~p~r~ig~H-ffNP~~~m~LVEi 158 (319)
T 3ado_A 84 AVEGVVHIQEC-VPENLDLKRKIFAQLDSIVDDRVVLS---SSSSCLLPSKLFTGLAHVKQCIVAH-PVNPPYYIPLVEL 158 (319)
T ss_dssp HTTTEEEEEEC-CCSCHHHHHHHHHHHHTTCCSSSEEE---ECCSSCCHHHHHTTCTTGGGEEEEE-ECSSTTTCCEEEE
T ss_pred HhccCcEEeec-cccHHHHHHHHHHHHHHHhhhcceee---hhhhhccchhhhhhccCCCcEEEec-CCCCccccchHHh
Confidence 01346776643 33333 35889999999999998844 3333456666665544 34455444 4444444444443
No 430
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=54.44 E-value=28 Score=34.06 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC---------CeEEEcCCCCCCCC-CCceeEEEcccc-----h
Q 027039 94 LFNHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL---------PLVSRADPHNLPFF-DEAFDVAFTAHL-----A 158 (229)
Q Consensus 94 ~~~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~---------~~~~~~d~~~~~~~-~~~fD~V~~~~~-----~ 158 (229)
...+.++||+|+|+-.=-..|-. +...|+.+|+-|-. -.+++.|...-.+- ...+|.|.|... .
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP-~~~pvtm~D~RP~ae~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLGAA~A 897 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIP-ATSPVTCVDIRPTAQPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLSLGAAAA 897 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSC-TTSCEEEEESSCCCSCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSCHHHHHH
T ss_pred ecccceEEEccCCCcceeeeecC-CCCceEEecccCchhhhccccccceeeEccccccceeecCCCcEEEEEeechhhhh
Confidence 46789999999886543322222 35589999988762 34888888764432 357899988622 2
Q ss_pred hhh-CHHHHHHHHHhccccCc--EEEEEeec
Q 027039 159 EAL-FPSRFVGEMERTVKIGG--VCMVLMEE 186 (229)
Q Consensus 159 ~~~-~~~~~l~~~~~~LkpgG--~lil~~~~ 186 (229)
... ...+.++++.+.+++.| ++++-+.+
T Consensus 898 ~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNc 928 (1289)
T 1ej6_A 898 GKSMTFDAAFQQLIKVLSKSTANVVLVQVNC 928 (1289)
T ss_dssp HHTCCHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred ccCCcHHHHHHHHHHHHHhcCccEEEEEecC
Confidence 222 56888899988888766 45544433
No 431
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=54.44 E-value=5.5 Score=34.05 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCChhhHHHHh----CCCCeEEEecCCCCCCe-----EEEcCCCCCCCCCCceeEEEcccchhhhCHHHHH
Q 027039 97 HSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL-----VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFV 167 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~----~g~~~v~~vD~s~~~~~-----~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l 167 (229)
|.+|.=||.| ..+..+++ .|. +|++.|.+..... +...+..++ -...|+|+..- .....-..++
T Consensus 176 gktvGIIGlG--~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~-Plt~~T~~li 248 (365)
T 4hy3_A 176 GSEIGIVGFG--DLGKALRRVLSGFRA-RIRVFDPWLPRSMLEENGVEPASLEDV---LTKSDFIFVVA-AVTSENKRFL 248 (365)
T ss_dssp SSEEEEECCS--HHHHHHHHHHTTSCC-EEEEECSSSCHHHHHHTTCEECCHHHH---HHSCSEEEECS-CSSCC---CC
T ss_pred CCEEEEecCC--cccHHHHHhhhhCCC-EEEEECCCCCHHHHhhcCeeeCCHHHH---HhcCCEEEEcC-cCCHHHHhhc
Confidence 6788888877 44444443 376 9999998754211 111122111 13578888641 1000011112
Q ss_pred -HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeEeeee
Q 027039 168 -GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVDAANV 210 (229)
Q Consensus 168 -~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 210 (229)
.+....+|||+.++ -+.....-+...+.+.++..++-...++
T Consensus 249 ~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~aaLDV 291 (365)
T 4hy3_A 249 GAEAFSSMRRGAAFI-LLSRADVVDFDALMAAVSSGHIVAASDV 291 (365)
T ss_dssp CHHHHHTSCTTCEEE-ECSCGGGSCHHHHHHHHHTTSSEEEESC
T ss_pred CHHHHhcCCCCcEEE-ECcCCchhCHHHHHHHHHcCCceEEeeC
Confidence 45667899999876 6666555667778888887666533333
No 432
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=53.99 E-value=60 Score=25.62 Aligned_cols=66 Identities=14% Similarity=0.178 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHHHhc
Q 027039 96 NHSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEMERT 173 (229)
Q Consensus 96 ~~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~~~~ 173 (229)
+.++|.=||+|. +.++..|.+.|+ +|+++|.. .+. ...| +++.-.. ...+++.++...
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~-~V~~~~~~-----------~~~----~~aD-ilavP~~---ai~~vl~~l~~~ 64 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGH-YVTVLHAP-----------EDI----RDFE-LVVIDAH---GVEGYVEKLSAF 64 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTC-EEEECSSG-----------GGG----GGCS-EEEECSS---CHHHHHHHHHTT
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCC-EEEEecCH-----------HHh----ccCC-EEEEcHH---HHHHHHHHHHHh
Confidence 457899999997 567888888887 99999873 111 2356 6653222 246677788888
Q ss_pred cccCcEEE
Q 027039 174 VKIGGVCM 181 (229)
Q Consensus 174 LkpgG~li 181 (229)
++||..++
T Consensus 65 l~~g~ivv 72 (232)
T 3dfu_A 65 ARRGQMFL 72 (232)
T ss_dssp CCTTCEEE
T ss_pred cCCCCEEE
Confidence 88877654
No 433
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=53.82 E-value=22 Score=28.31 Aligned_cols=89 Identities=13% Similarity=0.106 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC-----C-----CCC
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----F-----FDE 147 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~-----~~~ 147 (229)
.+.++|=.|++.| ..+..|++.|. +|+.++.... ...++.+|+.+.. + .-+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5678898888776 34555666787 7887755432 3447788887632 1 013
Q ss_pred ceeEEEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEee
Q 027039 148 AFDVAFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 148 ~fD~V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
..|+++.+.-. .... +..+.+.+.+.++++|.++.+.+
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 68999987211 0001 23455677778888999887655
No 434
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=53.60 E-value=34 Score=26.83 Aligned_cols=90 Identities=10% Similarity=0.029 Sum_probs=57.0
Q ss_pred CCCeEEEEcCC--CC---hhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC-----CC-----
Q 027039 96 NHSKVLCVSAG--AG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----FF----- 145 (229)
Q Consensus 96 ~~~~vLDiG~G--~G---~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~~----- 145 (229)
.+.++|=.|++ .| ..+..|++.|. +|+.++.++. .+.++++|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 46788888876 44 35566677787 8888876643 3567888887742 10
Q ss_pred CCceeEEEcccc-hh---------hhCH--------------HHHHHHHHhccccCcEEEEEeec
Q 027039 146 DEAFDVAFTAHL-AE---------ALFP--------------SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 146 ~~~fD~V~~~~~-~~---------~~~~--------------~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.+..|+++.+.- .. ..+. ..+.+.+.+.++++|.++.+.+.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 146898887621 10 0111 23456677778888998876654
No 435
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=53.41 E-value=8.5 Score=32.05 Aligned_cols=83 Identities=7% Similarity=-0.019 Sum_probs=46.4
Q ss_pred CCC-CeEEEE-cCCC-ChhhHHHHhC-CCCeEEEecCCCCCCeEE-------EcCCCCCCCC--------CCceeEEEcc
Q 027039 95 FNH-SKVLCV-SAGA-GHEVMAFNSI-GVADVTGVELMDSLPLVS-------RADPHNLPFF--------DEAFDVAFTA 155 (229)
Q Consensus 95 ~~~-~~vLDi-G~G~-G~~~~~l~~~-g~~~v~~vD~s~~~~~~~-------~~d~~~~~~~--------~~~fD~V~~~ 155 (229)
+++ .+||=. |+|. |..+..++.. |. +|+++|.+++..++. ..|..+..+. ...+|+|+-.
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 455 455533 3332 5555556665 87 999999887633210 1111111110 1358988864
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEe
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.-. ..+..+.+.|++||+++++-
T Consensus 241 ~g~------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 241 VTG------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp SCH------HHHHHHHHHSCTTCEEEECC
T ss_pred CCC------hhHHHHHhhhcCCCEEEEEe
Confidence 321 22467788999999988553
No 436
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=53.03 E-value=3.9 Score=34.15 Aligned_cols=109 Identities=9% Similarity=0.061 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCCCCe-EEE----cCCCCCCCCCCceeEEEccc-chhhhCHHHHH
Q 027039 96 NHSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDSLPL-VSR----ADPHNLPFFDEAFDVAFTAH-LAEALFPSRFV 167 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~~~~-~~~----~d~~~~~~~~~~fD~V~~~~-~~~~~~~~~~l 167 (229)
.+++|.=||.|. |. .+..+...|. +|+++|.++...+ +.. .+..++ -...|+|+..- .... -..++
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~el---l~~aDiV~l~~Plt~~--t~~li 211 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRKSWPGVESYVGREELRAF---LNQTRVLINLLPNTAQ--TVGII 211 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCCCCTTCEEEESHHHHHHH---HHTCSEEEECCCCCGG--GTTCB
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCchhhhhhhhhcccCCHHHH---HhhCCEEEEecCCchh--hhhhc
Confidence 467899998874 32 2333333477 9999998876432 111 111111 13578888751 1100 11112
Q ss_pred -HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeE-eeeee
Q 027039 168 -GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVD-AANVT 211 (229)
Q Consensus 168 -~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~ 211 (229)
.+....+|||..++ -+.....-+...+.+.++..++.. ..++.
T Consensus 212 ~~~~l~~mk~gailI-N~aRG~~vd~~aL~~aL~~g~i~gA~lDV~ 256 (315)
T 3pp8_A 212 NSELLDQLPDGAYVL-NLARGVHVQEADLLAALDSGKLKGAMLDVF 256 (315)
T ss_dssp SHHHHTTSCTTEEEE-ECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred cHHHHhhCCCCCEEE-ECCCChhhhHHHHHHHHHhCCccEEEcCCC
Confidence 44567789987765 666655566777888887666543 34443
No 437
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=52.57 E-value=9.6 Score=30.78 Aligned_cols=101 Identities=13% Similarity=-0.003 Sum_probs=53.5
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEE-cCCC---CCCCCCCceeEEEcccchhhhCHHHHH---H
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSR-ADPH---NLPFFDEAFDVAFTAHLAEALFPSRFV---G 168 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~-~d~~---~~~~~~~~fD~V~~~~~~~~~~~~~~l---~ 168 (229)
++|.=||+|. | ..+..+++.|+ +|+++|.+++..+-.. .... +..-.-...|+|+..- .......+.+ +
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~v-p~~~~~~~v~~~~~ 79 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAML-ADPAAAEEVCFGKH 79 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECC-SSHHHHHHHHHSTT
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEc-CCHHHHHHHHcCcc
Confidence 5778888875 2 34445556687 9999999887543111 0110 1000012468888632 1111134445 6
Q ss_pred HHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
++...+++|..++ ..........+.+.+....
T Consensus 80 ~l~~~l~~~~~vi-~~st~~~~~~~~~~~~~~~ 111 (287)
T 3pef_A 80 GVLEGIGEGRGYV-DMSTVDPATSQRIGVAVVA 111 (287)
T ss_dssp CHHHHCCTTCEEE-ECSCCCHHHHHHHHHHHHH
T ss_pred hHhhcCCCCCEEE-eCCCCCHHHHHHHHHHHHH
Confidence 6667788877644 4444333444555555554
No 438
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=52.56 E-value=25 Score=27.83 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC-----CC-----CC
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----FF-----DE 147 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~~-----~~ 147 (229)
.+.++|-.|++.| ..+..|++.|. +|+.++.... ...++++|+.+.. +. -+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567888887765 24555666687 8877765432 3457788887742 00 14
Q ss_pred ceeEEEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 148 AFDVAFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 148 ~fD~V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
..|+++.+.-. .... +..+.+.+.+.++.+|.++.+.+.
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 68999987211 0001 234456777788889998876654
No 439
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=52.55 E-value=8.8 Score=31.71 Aligned_cols=101 Identities=13% Similarity=0.077 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEEcCC--CCCCCCCCceeEEEccc-chhhhCHHHHH-HH
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSRADP--HNLPFFDEAFDVAFTAH-LAEALFPSRFV-GE 169 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~--~~~~~~~~~fD~V~~~~-~~~~~~~~~~l-~~ 169 (229)
.+.+|.=||.|. | ..+..+...|. +|+++|.++. .. +.. .++.-.-...|+|+..- .... -..++ .+
T Consensus 123 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~~~-~~---~~~~~~~l~ell~~aDvV~l~~P~~~~--t~~~i~~~ 195 (303)
T 1qp8_A 123 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPK-EG---PWRFTNSLEEALREARAAVCALPLNKH--TRGLVKYQ 195 (303)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCC-CS---SSCCBSCSHHHHTTCSEEEECCCCSTT--TTTCBCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcc-cc---CcccCCCHHHHHhhCCEEEEeCcCchH--HHHHhCHH
Confidence 467888898775 2 23333344476 8999998776 21 111 11110013579888751 1100 01111 24
Q ss_pred HHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 170 ~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
....+|||..++ -+....-.+...+.+.++..++
T Consensus 196 ~l~~mk~gaili-n~srg~~vd~~aL~~aL~~g~i 229 (303)
T 1qp8_A 196 HLALMAEDAVFV-NVGRAEVLDRDGVLRILKERPQ 229 (303)
T ss_dssp HHTTSCTTCEEE-ECSCGGGBCHHHHHHHHHHCTT
T ss_pred HHhhCCCCCEEE-ECCCCcccCHHHHHHHHHhCCc
Confidence 567789988765 5555444455667777765443
No 440
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.53 E-value=13 Score=30.12 Aligned_cols=109 Identities=9% Similarity=0.063 Sum_probs=60.9
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEEE-------------c-C---------------CCCCCCCC
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVSR-------------A-D---------------PHNLPFFD 146 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~-------------~-d---------------~~~~~~~~ 146 (229)
.+|.=||+|. ...+..++..|+ +|+.+|.+++..+-.. + . ..++.-.-
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 5788888875 234444556687 9999999876322000 0 0 01110001
Q ss_pred CceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeee
Q 027039 147 EAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANV 210 (229)
Q Consensus 147 ~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~ 210 (229)
...|+|+..-.........+++++...++|+..++ +.....+..++.+..+ ..+++.++-+
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~---s~tS~~~~~~la~~~~~~~~~ig~h~~ 145 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA---TNSSTLLPSDLVGYTGRGDKFLALHFA 145 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEE---ECCSSSCHHHHHHHHSCGGGEEEEEEC
T ss_pred ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEE---ECCCCCCHHHHHhhcCCCcceEEEccC
Confidence 35798887432211124667888888999887643 2222345566666554 3456666544
No 441
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=52.50 E-value=39 Score=25.73 Aligned_cols=82 Identities=11% Similarity=-0.027 Sum_probs=48.2
Q ss_pred CeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCC---------CCeEEEcCCCCCC----CCCCceeEEEcccchhh
Q 027039 98 SKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDS---------LPLVSRADPHNLP----FFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~---------~~~~~~~d~~~~~----~~~~~fD~V~~~~~~~~ 160 (229)
++|+=+|+ |..+..++ +.|. +|+.+|.+++ ...++.+|..+.. ..-...|+|++..-..
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d- 76 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD- 76 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH-
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc-
Confidence 35777776 55555554 4476 9999998875 2457888887632 1124678888742111
Q ss_pred hCHHHHHHHHHhccccCcEEEEEe
Q 027039 161 LFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 161 ~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.....+..+.+.+.|...++..+
T Consensus 77 -~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 77 -EVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp -HHHHHHHHHHHHTSCCCEEEECC
T ss_pred -HHHHHHHHHHHHHcCCCeEEEEE
Confidence 12234455555566666755443
No 442
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=52.15 E-value=20 Score=29.46 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCe--------EEE------cCC---CCCCCCCCceeEEEcc
Q 027039 95 FNHSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPL--------VSR------ADP---HNLPFFDEAFDVAFTA 155 (229)
Q Consensus 95 ~~~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~--------~~~------~d~---~~~~~~~~~fD~V~~~ 155 (229)
....+|.=||+|. +.++..|++.|. +|+.+ ..++..+ ... ..+ .+.. .-..+|+|+..
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vila 93 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVLFC 93 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEEEC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEE
Confidence 3567899999986 345556666676 88888 5543111 110 000 0111 11468998874
Q ss_pred cchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh
Q 027039 156 HLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (229)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~ 200 (229)
--.. ...++++++...++|+..++.+... -.....+.+.+.
T Consensus 94 vk~~--~~~~~l~~l~~~l~~~~~iv~~~nG--i~~~~~l~~~~~ 134 (318)
T 3hwr_A 94 VKST--DTQSAALAMKPALAKSALVLSLQNG--VENADTLRSLLE 134 (318)
T ss_dssp CCGG--GHHHHHHHHTTTSCTTCEEEEECSS--SSHHHHHHHHCC
T ss_pred cccc--cHHHHHHHHHHhcCCCCEEEEeCCC--CCcHHHHHHHcC
Confidence 2111 3577888899999988765544332 222245667775
No 443
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=52.04 E-value=19 Score=29.03 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=55.8
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe--------EEE------cCCC--CC-CCCC--CceeEEEccc
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL--------VSR------ADPH--NL-PFFD--EAFDVAFTAH 156 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~--------~~~------~d~~--~~-~~~~--~~fD~V~~~~ 156 (229)
++|.=||+|. | .++..+++.|+ +|+.+|.+++..+ ... .... +. .... ...|+|+..-
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v 82 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALT 82 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEe
Confidence 5799999875 2 34445556677 9999998765211 111 0000 10 0111 2689988742
Q ss_pred chhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 157 LAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 157 ~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
-.. ...++++++...++|+..++. +.. +-...+.+.+.+...+++
T Consensus 83 ~~~--~~~~v~~~l~~~l~~~~~iv~-~~~-g~~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 83 KAQ--QLDAMFKAIQPMITEKTYVLC-LLN-GLGHEDVLEKYVPKENIL 127 (316)
T ss_dssp CHH--HHHHHHHHHGGGCCTTCEEEE-CCS-SSCTHHHHTTTSCGGGEE
T ss_pred ccc--cHHHHHHHHHHhcCCCCEEEE-ecC-CCCcHHHHHHHcCCccEE
Confidence 211 236677888888888776553 322 222234555556544333
No 444
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=51.94 E-value=8.1 Score=31.41 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=54.0
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeE------E-EcCCCCCCCCCCceeEEEcccchhhhCHHHHHH
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLV------S-RADPHNLPFFDEAFDVAFTAHLAEALFPSRFVG 168 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~------~-~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~ 168 (229)
++|.=||+|. | ..+..+++.|+ +|+++|.+++..+- . ..+..+. -...|+|+..- .......+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~~~~~~---~~~aDvvi~~v-p~~~~~~~v~~ 78 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAARSARDA---VQGADVVISML-PASQHVEGLYL 78 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECSSHHHH---HTTCSEEEECC-SCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCeEcCCHHHH---HhCCCeEEEEC-CCHHHHHHHHc
Confidence 5788899986 2 45555666687 99999998763321 1 1111111 13468888632 11111234454
Q ss_pred ---HHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 169 ---EMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 169 ---~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
++...+++|..++ ..........+.+.+.++.
T Consensus 79 ~~~~~~~~l~~~~~vi-~~st~~~~~~~~l~~~~~~ 113 (302)
T 2h78_A 79 DDDGLLAHIAPGTLVL-ECSTIAPTSARKIHAAARE 113 (302)
T ss_dssp SSSCGGGSSCSSCEEE-ECSCCCHHHHHHHHHHHHH
T ss_pred CchhHHhcCCCCcEEE-ECCCCCHHHHHHHHHHHHH
Confidence 5666777776544 4444333344556666654
No 445
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=51.35 E-value=59 Score=27.44 Aligned_cols=83 Identities=8% Similarity=0.025 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCCCCCCCCceeEEEcccch
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHNLPFFDEAFDVAFTAHLA 158 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~~~~~~fD~V~~~~~~ 158 (229)
.+.+||.++.+.|.++..++..+. +.+.-|-- .+.+ ...... ..+.||+|+.. +.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~~---~~~~ds~~~~~~~~~n~~~~~~~~~~~~~-~~~~~~---~~~~~~~v~~~-lp 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHKP---YSIGDSYISELATRENLRLNGIDESSVKF-LDSTAD---YPQQPGVVLIK-VP 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGCC---EEEESCHHHHHHHHHHHHHTTCCGGGSEE-EETTSC---CCSSCSEEEEE-CC
T ss_pred CCCCEEEECCCCCHHHHhhccCCc---eEEEhHHHHHHHHHHHHHHcCCCccceEe-cccccc---cccCCCEEEEE-cC
Confidence 557899999999999999876532 33311100 0122 122222 24679998873 33
Q ss_pred hhh-CHHHHHHHHHhccccCcEEEEEeec
Q 027039 159 EAL-FPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 159 ~~~-~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
... .....+.++...|+||+.+++.-..
T Consensus 110 k~~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 KTLALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SCHHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 333 3577788999999999998755444
No 446
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=50.57 E-value=3.4 Score=34.39 Aligned_cols=103 Identities=10% Similarity=0.054 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCe-----EEEcCCCCCCCCCCceeEEEcccchhhhCHHH
Q 027039 95 FNHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPL-----VSRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~-----~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~ 165 (229)
-.+.+|.=||+| ..+..++ ..|. +|+++|.++.... ....+..++ -...|+|+..--... .-..
T Consensus 140 l~g~~vgIIG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvVvl~~P~~~-~t~~ 212 (313)
T 2ekl_A 140 LAGKTIGIVGFG--RIGTKVGIIANAMGM-KVLAYDILDIREKAEKINAKAVSLEEL---LKNSDVISLHVTVSK-DAKP 212 (313)
T ss_dssp CTTCEEEEESCS--HHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHH---HHHCSEEEECCCCCT-TSCC
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHHCCC-EEEEECCCcchhHHHhcCceecCHHHH---HhhCCEEEEeccCCh-HHHH
Confidence 356789999876 4444443 3476 9999999876321 111111111 135788887511000 0001
Q ss_pred HH-HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 166 FV-GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 166 ~l-~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
++ .+....+|||+.++ .+......+...+.+.+++.++.
T Consensus 213 li~~~~l~~mk~ga~lI-n~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 213 IIDYPQFELMKDNVIIV-NTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp SBCHHHHHHSCTTEEEE-ESSCGGGBCHHHHHHHHHTTCEE
T ss_pred hhCHHHHhcCCCCCEEE-ECCCCcccCHHHHHHHHHcCCCc
Confidence 11 33456688887655 55554445566777877766554
No 447
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=49.90 E-value=23 Score=30.47 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=26.2
Q ss_pred CCCeEEEEcCCCChhhHHHHhC--------CCCeEEEecCCCC
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI--------GVADVTGVELMDS 130 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~--------g~~~v~~vD~s~~ 130 (229)
....|+|+|+|.|.++..+... ...++..+|+|+.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~ 122 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPV 122 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHH
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHH
Confidence 3457999999999987776421 1238999999984
No 448
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=49.64 E-value=57 Score=27.55 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCCCh-hhHHHHhCC-CCeEEEecCCCCC---------CeEEEcCCCCCCCCCCceeEEEcccchhhhCH
Q 027039 95 FNHSKVLCVSAGAGH-EVMAFNSIG-VADVTGVELMDSL---------PLVSRADPHNLPFFDEAFDVAFTAHLAEALFP 163 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~-~~~~l~~~g-~~~v~~vD~s~~~---------~~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~ 163 (229)
..+.+|+-.|+|+.. ........+ ..-...+|.++.. +.++. .+. +.+...|.|+...-. ..
T Consensus 317 ~~gk~v~~yGa~~~g~~l~~~~~~~~~~i~~~~D~~~~k~g~~~~g~~ipi~~--p~~--~~~~~~d~vl~~~~~---~~ 389 (416)
T 4e2x_A 317 AEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTPDKQNRLTPGAHIPVRP--ASA--FSDPYPDYALLFAWN---HA 389 (416)
T ss_dssp HTTCCEEEECCCSHHHHHHHHHTCCTTTSCCEEESCGGGTTEECTTTCCEEEE--GGG--CCSSCCSEEEESCGG---GH
T ss_pred HcCCeEEEEccccHHHHHHHhcCCCcceeeEEEeCCccccCccCCCCCCcCCC--HHH--HhhcCCCEEEEecch---hH
Confidence 467899999988632 222222332 2233456877662 22221 122 224567876652211 15
Q ss_pred HHHHHHHHhccccCcEEEEEeec
Q 027039 164 SRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 164 ~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.++++++......||++++.+++
T Consensus 390 ~ei~~~~~~~~~~g~~~~~~~p~ 412 (416)
T 4e2x_A 390 EEIMAKEQEFHQAGGRWILYVPE 412 (416)
T ss_dssp HHHHHHCHHHHHTTCEEEECSSS
T ss_pred HHHHHHHHHHHhcCCEEEEECCc
Confidence 66778888888899998877664
No 449
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=49.04 E-value=30 Score=26.49 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=38.6
Q ss_pred CCCeEEEEcCCCChhhHH----HHhCCCCeEEEecCCCC--------CC-eEEEcCCCC-CCCCCCceeEEEcc
Q 027039 96 NHSKVLCVSAGAGHEVMA----FNSIGVADVTGVELMDS--------LP-LVSRADPHN-LPFFDEAFDVAFTA 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~----l~~~g~~~v~~vD~s~~--------~~-~~~~~d~~~-~~~~~~~fD~V~~~ 155 (229)
.+++||=.|+. |..+.+ |.+.|+ +|++++.++. .+ .++++|+.+ +.-.-+..|+|+.+
T Consensus 20 ~~~~ilVtGat-G~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVVGAN-GKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEECCC-ChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 57789988864 444444 445577 9999988765 45 788999862 21112468999976
No 450
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=48.94 E-value=10 Score=32.95 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCCCCe--EEE-cCCCCCCCCCCceeEEEcccchhhhCHHHHH-HH
Q 027039 96 NHSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDSLPL--VSR-ADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GE 169 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~~~~--~~~-~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l-~~ 169 (229)
.|.++.=||.|. |. .+..+...|. +|++.|.++.... ... .+..++ -...|+|+..- .....-..++ .+
T Consensus 155 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~yd~~~~~~~~~~~~~~sl~el---l~~aDvV~lhv-Plt~~T~~li~~~ 229 (416)
T 3k5p_A 155 RGKTLGIVGYGNIGSQVGNLAESLGM-TVRYYDTSDKLQYGNVKPAASLDEL---LKTSDVVSLHV-PSSKSTSKLITEA 229 (416)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECTTCCCCBTTBEECSSHHHH---HHHCSEEEECC-CC-----CCBCHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCcchhcccCcEecCCHHHH---HhhCCEEEEeC-CCCHHHhhhcCHH
Confidence 367899998874 22 2333333477 9999998765321 111 111111 13578888641 1100001111 34
Q ss_pred HHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 170 ~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
....+|||..++ -+.....-+...+.+.++..++.
T Consensus 230 ~l~~mk~gailI-N~aRG~vvd~~aL~~aL~~g~i~ 264 (416)
T 3k5p_A 230 KLRKMKKGAFLI-NNARGSDVDLEALAKVLQEGHLA 264 (416)
T ss_dssp HHHHSCTTEEEE-ECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHhhCCCCcEEE-ECCCChhhhHHHHHHHHHcCCcc
Confidence 556788888765 66666666777888888766654
No 451
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=48.48 E-value=29 Score=26.25 Aligned_cols=56 Identities=9% Similarity=-0.066 Sum_probs=37.4
Q ss_pred CeEEEEcCCCChhhHHHHh----CCCCeEEEecCCCC------CCeEEEcCCCC-CC---CCCCceeEEEcc
Q 027039 98 SKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDS------LPLVSRADPHN-LP---FFDEAFDVAFTA 155 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~~----~g~~~v~~vD~s~~------~~~~~~~d~~~-~~---~~~~~fD~V~~~ 155 (229)
++||=.| |+|..+..+++ .|+ +|++++.++. .+.++++|+.+ .. -.-..+|+|+.+
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 3677677 45666666554 376 9999988764 45688999887 21 112368999976
No 452
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=48.42 E-value=11 Score=30.31 Aligned_cols=81 Identities=11% Similarity=0.074 Sum_probs=46.1
Q ss_pred CeEEEEcC-CC--ChhhHHHHhCCCCeEEEecCCCCCCeEEE---cCCCCCCCCCCceeEEEcccchhhhCHHHHHHHHH
Q 027039 98 SKVLCVSA-GA--GHEVMAFNSIGVADVTGVELMDSLPLVSR---ADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEME 171 (229)
Q Consensus 98 ~~vLDiG~-G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~~---~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~~ 171 (229)
++|.=||+ |. +..+..+...|+ +|+++|.+++..+-.. .+..+..-.-...|+|+..--... ..+++.++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~--~~~v~~~l~ 88 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI--IEKVAEDIV 88 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH--HHHHHHHHG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH--HHHHHHHHH
Confidence 58999998 75 234555566676 8999998765321100 011111111135799887422221 356677777
Q ss_pred hccccCcEEE
Q 027039 172 RTVKIGGVCM 181 (229)
Q Consensus 172 ~~LkpgG~li 181 (229)
..++||..++
T Consensus 89 ~~l~~~~ivv 98 (286)
T 3c24_A 89 PRVRPGTIVL 98 (286)
T ss_dssp GGSCTTCEEE
T ss_pred HhCCCCCEEE
Confidence 7788776533
No 453
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.38 E-value=16 Score=30.05 Aligned_cols=100 Identities=10% Similarity=0.095 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeE-------EEcCCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLV-------SRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~-------~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
..++|.=||+|. | ..+..+++.|+ +|+++|.+++..+- ...+..+. -...|+|+..- ........+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~~~~e~---~~~aDvVi~~v-p~~~~~~~v 104 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHEQARAA---ARDADIVVSML-ENGAVVQDV 104 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEESSHHHH---HTTCSEEEECC-SSHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeCCHHHH---HhcCCEEEEEC-CCHHHHHHH
Confidence 456899999986 3 34455666687 99999998763221 11111111 13468888642 111112334
Q ss_pred HH--HHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 167 VG--EMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 167 l~--~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
+. ++...+++|..++ ..........+.+.+....
T Consensus 105 ~~~~~~~~~l~~~~~vi-~~st~~~~~~~~~~~~~~~ 140 (320)
T 4dll_A 105 LFAQGVAAAMKPGSLFL-DMASITPREARDHAARLGA 140 (320)
T ss_dssp HTTTCHHHHCCTTCEEE-ECSCCCHHHHHHHHHHHHH
T ss_pred HcchhHHhhCCCCCEEE-ecCCCCHHHHHHHHHHHHH
Confidence 44 5666777776644 4444333344555555553
No 454
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=48.29 E-value=3.7 Score=34.07 Aligned_cols=101 Identities=9% Similarity=0.018 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCe-----EEEcCCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPL-----VSRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~-----~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
.+.+|.=||.| ..+..++ ..|. +|+++|.++.... +...+..++ -...|+|+..--.. ..-..+
T Consensus 141 ~g~~vgIiG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~p~~-~~t~~l 213 (307)
T 1wwk_A 141 EGKTIGIIGFG--RIGYQVAKIANALGM-NILLYDPYPNEERAKEVNGKFVDLETL---LKESDVVTIHVPLV-ESTYHL 213 (307)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHH---HHHCSEEEECCCCS-TTTTTC
T ss_pred CCceEEEEccC--HHHHHHHHHHHHCCC-EEEEECCCCChhhHhhcCccccCHHHH---HhhCCEEEEecCCC-hHHhhh
Confidence 46788889876 4444443 3476 9999999876311 111111111 13578888751100 000111
Q ss_pred H-HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 167 V-GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 167 l-~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
+ .+....+|||+.++ .+.....-+...+.+.+++.++
T Consensus 214 i~~~~l~~mk~ga~li-n~arg~~vd~~aL~~aL~~g~i 251 (307)
T 1wwk_A 214 INEERLKLMKKTAILI-NTSRGPVVDTNALVKALKEGWI 251 (307)
T ss_dssp BCHHHHHHSCTTCEEE-ECSCGGGBCHHHHHHHHHHTSS
T ss_pred cCHHHHhcCCCCeEEE-ECCCCcccCHHHHHHHHHhCCC
Confidence 1 34556789988866 5555444455667777775544
No 455
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=48.23 E-value=35 Score=27.49 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC----------------CCeEEEcCCCCCC-----CC-----C
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS----------------LPLVSRADPHNLP-----FF-----D 146 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~----------------~~~~~~~d~~~~~-----~~-----~ 146 (229)
.+.++|=.|++.| ..+..|++.|. +|+.+|.+.. .+.++++|+.+.. +. -
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678888887765 34455666687 8888877522 2346677776632 00 1
Q ss_pred CceeEEEcccch-h------hhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 147 EAFDVAFTAHLA-E------ALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 147 ~~fD~V~~~~~~-~------~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
+..|+++.+.-. . ... +..+.+.+.+.++.+|.++.+.+.
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 478999877211 0 001 134456777788889998866544
No 456
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=47.86 E-value=82 Score=23.32 Aligned_cols=85 Identities=13% Similarity=0.010 Sum_probs=48.8
Q ss_pred CeEEEEcCCCChhhHHH----HhCCCCeEEEecCCCC-------CCeEEEcCCCCCCC-CCCceeEEEcccchh--hh-C
Q 027039 98 SKVLCVSAGAGHEVMAF----NSIGVADVTGVELMDS-------LPLVSRADPHNLPF-FDEAFDVAFTAHLAE--AL-F 162 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l----~~~g~~~v~~vD~s~~-------~~~~~~~d~~~~~~-~~~~fD~V~~~~~~~--~~-~ 162 (229)
++||=.|+ +|..+..+ .+.|+ +|++++.++. .+.++.+|+.+... .-..+|+|+.+.-.. .. .
T Consensus 1 MkvlVtGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~ 78 (221)
T 3ew7_A 1 MKIGIIGA-TGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEK 78 (221)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTS
T ss_pred CeEEEEcC-CchhHHHHHHHHHhCCC-EEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccch
Confidence 36777774 45545444 44576 9999988763 56788888876431 014589999763211 11 2
Q ss_pred HHHHHHHHHhcccc--CcEEEEEe
Q 027039 163 PSRFVGEMERTVKI--GGVCMVLM 184 (229)
Q Consensus 163 ~~~~l~~~~~~Lkp--gG~lil~~ 184 (229)
.......+.+.++. .++++++.
T Consensus 79 ~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 79 HVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp HHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEe
Confidence 23444555555544 35666543
No 457
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=47.80 E-value=1.5 Score=37.29 Aligned_cols=88 Identities=15% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCeEEEEcCCC-ChhhHHHHh-CCCCeEEEecCCCCCCe-----------EEEcCCCCCCCCCCceeEEEcccchhhh-C
Q 027039 97 HSKVLCVSAGA-GHEVMAFNS-IGVADVTGVELMDSLPL-----------VSRADPHNLPFFDEAFDVAFTAHLAEAL-F 162 (229)
Q Consensus 97 ~~~vLDiG~G~-G~~~~~l~~-~g~~~v~~vD~s~~~~~-----------~~~~d~~~~~~~~~~fD~V~~~~~~~~~-~ 162 (229)
+.+|+=+|+|. |......+. .|. +|+++|.+++..+ ....+..++.-.-..+|+|+........ .
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 48999999964 333333333 387 9999999865221 1111111110001258999864221111 1
Q ss_pred HHHHHHHHHhccccCcEEEEEee
Q 027039 163 PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
|.-+.++..+.++|||.++.+..
T Consensus 246 ~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 246 PILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCBCHHHHTTSCTTCEEEETTC
T ss_pred CeecCHHHHhhCCCCCEEEEEec
Confidence 11123456678899998774443
No 458
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=47.35 E-value=16 Score=30.76 Aligned_cols=103 Identities=12% Similarity=0.135 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCCCCe-EEE-cCCCCCCCCCCceeEEEcccchhhhCHHHHH-HHH
Q 027039 96 NHSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDSLPL-VSR-ADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GEM 170 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~~~~-~~~-~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l-~~~ 170 (229)
.+++|.=||.|. |. .+..+...|. +|++.|.++.... +.. .+..++ -...|+|+..- ........++ ++.
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~sl~el---l~~aDvVil~v-P~t~~t~~li~~~~ 244 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLSGVDWIAHQSPVDL---ARDSDVLAVCV-AASAATQNIVDASL 244 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCTTSCCEECSSHHHH---HHTCSEEEECC-----------CHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCcccccCceecCCHHHH---HhcCCEEEEeC-CCCHHHHHHhhHHH
Confidence 467899998874 22 2233333376 9999998876421 111 111111 13578888741 1111112233 566
Q ss_pred HhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 171 ~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
...+|||..++ -+.....-+...+.+.++..++
T Consensus 245 l~~mk~gailI-N~aRG~vvde~aL~~aL~~g~i 277 (340)
T 4dgs_A 245 LQALGPEGIVV-NVARGNVVDEDALIEALKSGTI 277 (340)
T ss_dssp HHHTTTTCEEE-ECSCC--------------CCS
T ss_pred HhcCCCCCEEE-ECCCCcccCHHHHHHHHHcCCc
Confidence 67789998765 5555444455556666665444
No 459
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=46.89 E-value=59 Score=25.73 Aligned_cols=102 Identities=12% Similarity=0.175 Sum_probs=54.7
Q ss_pred CeEEEEcCCC--ChhhHHHHhCCC-CeEEEecCCCCCCeE---------EEcCCCCCCCCCC-ceeEEEcccchhhhCHH
Q 027039 98 SKVLCVSAGA--GHEVMAFNSIGV-ADVTGVELMDSLPLV---------SRADPHNLPFFDE-AFDVAFTAHLAEALFPS 164 (229)
Q Consensus 98 ~~vLDiG~G~--G~~~~~l~~~g~-~~v~~vD~s~~~~~~---------~~~d~~~~~~~~~-~fD~V~~~~~~~~~~~~ 164 (229)
++|.=||+|. +..+..+...|. .+|+++|.+++..+. ...|..+. -. ..|+|+..--.. ...
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~aDvVilavp~~--~~~ 76 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV---EDFSPDFVMLSSPVR--TFR 76 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGG---GGTCCSEEEECSCHH--HHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHH---hcCCCCEEEEcCCHH--HHH
Confidence 3678888775 233444555553 279999988652211 11122111 13 678888742111 134
Q ss_pred HHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeE
Q 027039 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVD 206 (229)
Q Consensus 165 ~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~ 206 (229)
+++.++...++++..++ .+........+.+.+.+.. +++.
T Consensus 77 ~v~~~l~~~l~~~~iv~-~~~~~~~~~~~~l~~~l~~-~~v~ 116 (281)
T 2g5c_A 77 EIAKKLSYILSEDATVT-DQGSVKGKLVYDLENILGK-RFVG 116 (281)
T ss_dssp HHHHHHHHHSCTTCEEE-ECCSCCTHHHHHHHHHHGG-GEEC
T ss_pred HHHHHHHhhCCCCcEEE-ECCCCcHHHHHHHHHhccc-ccee
Confidence 56777778888887544 3333333334556666654 3444
No 460
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=46.21 E-value=12 Score=31.40 Aligned_cols=102 Identities=11% Similarity=0.018 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCChhhHHHHh----CCCCeEEEecCCCCCCe------EEEcCCCCCCCCCCceeEEEcccchhhhCHHH
Q 027039 96 NHSKVLCVSAGAGHEVMAFNS----IGVADVTGVELMDSLPL------VSRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~----~g~~~v~~vD~s~~~~~------~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~ 165 (229)
.+.+|.=||.| ..+..+++ .|. +|++.|.++...+ +...+..++ -...|+|+..- .....-..
T Consensus 144 ~g~tvGIIG~G--~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~-P~t~~t~~ 216 (330)
T 4e5n_A 144 DNATVGFLGMG--AIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQVACSEL---FASSDFILLAL-PLNADTLH 216 (330)
T ss_dssp TTCEEEEECCS--HHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEECCHHHH---HHHCSEEEECC-CCSTTTTT
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeCCHHHH---HhhCCEEEEcC-CCCHHHHH
Confidence 46789999877 44444443 376 8999999874221 211222221 13578888741 10000011
Q ss_pred H-HHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 166 F-VGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 166 ~-l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
+ -.+....+|||..++ -+.....-+...+.+.++..++.
T Consensus 217 li~~~~l~~mk~gailI-N~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 217 LVNAELLALVRPGALLV-NPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp CBCHHHHTTSCTTEEEE-ECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HhCHHHHhhCCCCcEEE-ECCCCchhCHHHHHHHHHhCCcc
Confidence 1 145677889988766 66655555667777777766554
No 461
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=46.16 E-value=77 Score=29.63 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=68.7
Q ss_pred CCeEEEEcCCCC--hhhHHHHhCCCCeEEEecCCCCCCe-----------------------------EEEcCCCCCCCC
Q 027039 97 HSKVLCVSAGAG--HEVMAFNSIGVADVTGVELMDSLPL-----------------------------VSRADPHNLPFF 145 (229)
Q Consensus 97 ~~~vLDiG~G~G--~~~~~l~~~g~~~v~~vD~s~~~~~-----------------------------~~~~d~~~~~~~ 145 (229)
-.+|--||+|+- ..+..++..|+ .|+..|++++.++ ....|..+ +
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--l- 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE--L- 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG--G-
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH--H-
Confidence 358999999983 45555666688 9999999976211 11111111 1
Q ss_pred CCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeeeeecCCeeEEEE
Q 027039 146 DEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANVTVNGSNMTRIL 221 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~ 221 (229)
...|+|+=. +.+-+ -..++++++..+++|+..+. ++....+..++.+..+ ..+++..+ +-++-..|+.+-
T Consensus 392 -~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIlA---SNTSsl~i~~ia~~~~~p~r~ig~H-FfnP~~~m~LVE 463 (742)
T 3zwc_A 392 -STVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFLC---TNTSALNVDDIASSTDRPQLVIGTH-FFSPAHVMRLLE 463 (742)
T ss_dssp -GSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEEE---ECCSSSCHHHHHTTSSCGGGEEEEE-CCSSTTTCCEEE
T ss_pred -hhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceEE---ecCCcCChHHHHhhcCCcccccccc-ccCCCCCCceEE
Confidence 346888863 33333 46889999999999998844 3333456666665444 34444444 334444444433
No 462
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=45.39 E-value=19 Score=30.08 Aligned_cols=104 Identities=11% Similarity=0.021 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCeEEEc-CCCCCCCCCCceeEEEcccchhhhCHHHHH-HH
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLVSRA-DPHNLPFFDEAFDVAFTAHLAEALFPSRFV-GE 169 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~~~~~-d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l-~~ 169 (229)
.+.+|.=||.| ..+..++ ..|. +|+++|.++... .... +..++.-.-...|+|+..--.. ..-..++ .+
T Consensus 144 ~g~~vgIiG~G--~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~l~ell~~aDvV~~~~P~~-~~t~~li~~~ 218 (333)
T 1dxy_A 144 GQQTVGVMGTG--HIGQVAIKLFKGFGA-KVIAYDPYPMKG-DHPDFDYVSLEDLFKQSDVIDLHVPGI-EQNTHIINEA 218 (333)
T ss_dssp GGSEEEEECCS--HHHHHHHHHHHHTTC-EEEEECSSCCSS-CCTTCEECCHHHHHHHCSEEEECCCCC-GGGTTSBCHH
T ss_pred CCCEEEEECcC--HHHHHHHHHHHHCCC-EEEEECCCcchh-hHhccccCCHHHHHhcCCEEEEcCCCc-hhHHHHhCHH
Confidence 45788899876 4444443 3376 899999887543 1000 0001100013578888751100 0000111 34
Q ss_pred HHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 170 MERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 170 ~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
....+|||+.++ .+.....-+.+.+.+.+++.++.
T Consensus 219 ~l~~mk~ga~lI-n~srg~~vd~~aL~~aL~~g~i~ 253 (333)
T 1dxy_A 219 AFNLMKPGAIVI-NTARPNLIDTQAMLSNLKSGKLA 253 (333)
T ss_dssp HHHHSCTTEEEE-ECSCTTSBCHHHHHHHHHTTSEE
T ss_pred HHhhCCCCcEEE-ECCCCcccCHHHHHHHHHhCCcc
Confidence 556789988765 66665555667788887766654
No 463
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=45.30 E-value=35 Score=26.90 Aligned_cols=89 Identities=10% Similarity=0.032 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC-----------------CCeEEEcCCCCCC-----CC-----
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS-----------------LPLVSRADPHNLP-----FF----- 145 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~-----------------~~~~~~~d~~~~~-----~~----- 145 (229)
.+.++|=.|++.| ..+..|++.|. +|+.++.+.. .+.++++|+.+.. +.
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4677888887766 24445556677 7888765421 2447788887632 10
Q ss_pred CCceeEEEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEee
Q 027039 146 DEAFDVAFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 146 ~~~fD~V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
-+..|+++.+.-. .... +..+.+.+.+.++++|.++.+.+
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 1478999987210 0001 23345666777778898886644
No 464
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=45.27 E-value=91 Score=26.36 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCC--------CCeEEEcCCCCCCCCCCceeEEEcccchh--hh-CHH
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDS--------LPLVSRADPHNLPFFDEAFDVAFTAHLAE--AL-FPS 164 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~--------~~~~~~~d~~~~~~~~~~fD~V~~~~~~~--~~-~~~ 164 (229)
.+.+||.++.+-|..+..+... .+++.+.-+-. ...... ......+...||+|+.. +.. .. ...
T Consensus 45 ~~~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~d~v~~~-~Pk~k~~~~~~ 119 (381)
T 3dmg_A 45 FGERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRCLTASGLQARL--ALPWEAAAGAYDLVVLA-LPAGRGTAYVQ 119 (381)
T ss_dssp CSSEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHHHHHTTCCCEE--CCGGGSCTTCEEEEEEE-CCGGGCHHHHH
T ss_pred hCCcEEEecCCCCccccccCCC--CceEEEeCcHHHHHHHHHcCCCccc--cCCccCCcCCCCEEEEE-CCcchhHHHHH
Confidence 4578999999999887776533 36666633311 111111 11122235689999873 221 11 356
Q ss_pred HHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh
Q 027039 165 RFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR 200 (229)
Q Consensus 165 ~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~ 200 (229)
..+.++.+.|+|||.+++.-... ..++.+...++
T Consensus 120 ~~l~~~~~~l~~g~~i~~~g~~~--~g~~~~~~~~~ 153 (381)
T 3dmg_A 120 ASLVAAARALRMGGRLYLAGDKN--KGFERYFKEAR 153 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEGG--GTHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEEEEccH--HHHHHHHHHHH
Confidence 78889999999999988666552 24444444443
No 465
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=44.92 E-value=12 Score=30.28 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=51.6
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEE-EcCCC---CCCCCCCceeEEEcccchhhhCHHHHH---H
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVS-RADPH---NLPFFDEAFDVAFTAHLAEALFPSRFV---G 168 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~-~~d~~---~~~~~~~~fD~V~~~~~~~~~~~~~~l---~ 168 (229)
++|.=||+|. | ..+..+++.|+ +|+++|.+++..+-. ..... +..-.-...|+|+..- .......+.+ +
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v-~~~~~~~~v~~~~~ 79 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAML-ADPAAAREVCFGAN 79 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECC-SSHHHHHHHHHSTT
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEc-CCHHHHHHHHcCch
Confidence 3677788876 2 34445556687 999999998744311 00110 1000002468888632 1111123344 4
Q ss_pred HHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
++...+++|..++ ..........+.+.+.+..
T Consensus 80 ~l~~~l~~g~~vv-~~st~~~~~~~~~~~~~~~ 111 (287)
T 3pdu_A 80 GVLEGIGGGRGYI-DMSTVDDETSTAIGAAVTA 111 (287)
T ss_dssp CGGGTCCTTCEEE-ECSCCCHHHHHHHHHHHHH
T ss_pred hhhhcccCCCEEE-ECCCCCHHHHHHHHHHHHH
Confidence 5566677776544 4444333344555555554
No 466
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=44.76 E-value=18 Score=19.87 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027039 1 MERHVEALLRKISYGAITIATFTLVMLML 29 (229)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 29 (229)
||-++--|+.-++++.++.+.+..+|+=.
T Consensus 1 MEVn~l~fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 1 MEVNQLGLIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 55566667777777777777777777643
No 467
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=44.52 E-value=12 Score=30.84 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=26.5
Q ss_pred HHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 163 PSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 163 ~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
..+++..+.+.|+|||++++++-. .-+.+-++..|+.
T Consensus 224 l~~~l~~~~~~l~~ggr~~visfh--sledr~vk~~~~~ 260 (301)
T 1m6y_A 224 LKEFLKKAEDLLNPGGRIVVISFH--SLEDRIVKETFRN 260 (301)
T ss_dssp HHHHHHHGGGGEEEEEEEEEEESS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCEEEEEecC--cHHHHHHHHHhhc
Confidence 467889999999999999866544 2233446667764
No 468
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=44.50 E-value=92 Score=25.40 Aligned_cols=99 Identities=8% Similarity=0.030 Sum_probs=55.7
Q ss_pred CCeEEEEcCCC-C-hhhHHHHhCC-CCeEEEecCCCC-------CCe-EE----Ec-CCCCCCCCCCceeEEEcccchhh
Q 027039 97 HSKVLCVSAGA-G-HEVMAFNSIG-VADVTGVELMDS-------LPL-VS----RA-DPHNLPFFDEAFDVAFTAHLAEA 160 (229)
Q Consensus 97 ~~~vLDiG~G~-G-~~~~~l~~~g-~~~v~~vD~s~~-------~~~-~~----~~-d~~~~~~~~~~fD~V~~~~~~~~ 160 (229)
.++|.=||+|. | ..+..+++.| + +|+++|.++. ..+ +. .. +..+. -...|+|+..--..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~-~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~---~~~aDvVi~avp~~- 98 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA-RLAAYDLRFNDPAASGALRARAAELGVEPLDDVAG---IACADVVLSLVVGA- 98 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS-EEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGG---GGGCSEEEECCCGG-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC-eEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHH---HhcCCEEEEecCCH-
Confidence 36899999875 2 3444455567 6 9999999862 111 00 11 22221 13578888742111
Q ss_pred hCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 161 LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 161 ~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
...+.+.++...++||..++ ..........+.+.+.+...
T Consensus 99 -~~~~~~~~i~~~l~~~~ivv-~~st~~p~~~~~~~~~l~~~ 138 (317)
T 4ezb_A 99 -ATKAVAASAAPHLSDEAVFI-DLNSVGPDTKALAAGAIATG 138 (317)
T ss_dssp -GHHHHHHHHGGGCCTTCEEE-ECCSCCHHHHHHHHHHHHTS
T ss_pred -HHHHHHHHHHhhcCCCCEEE-ECCCCCHHHHHHHHHHHHHc
Confidence 12344578888888877644 44443444556666666644
No 469
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=44.27 E-value=89 Score=23.88 Aligned_cols=86 Identities=8% Similarity=-0.088 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCCChhhHHHHhC----CCCeEEEecCCCC-------CCeEEEcCCCCCC----CCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGAGHEVMAFNSI----GVADVTGVELMDS-------LPLVSRADPHNLP----FFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~G~~~~~l~~~----g~~~v~~vD~s~~-------~~~~~~~d~~~~~----~~~~~fD~V~~~~~~~ 159 (229)
....+|+=+|+ |..+..+++. |. |+++|.+++ ...++.+|..+.. ..-...|.|++..-..
T Consensus 7 ~~~~~viI~G~--G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (234)
T 2aef_A 7 AKSRHVVICGW--SESTLECLRELRGSEV--FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD 82 (234)
T ss_dssp ---CEEEEESC--CHHHHHHHHHSTTSEE--EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCH
T ss_pred CCCCEEEEECC--ChHHHHHHHHHHhCCe--EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCc
Confidence 34568998887 5777666544 43 999998865 3558888887632 1124678888742111
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEeec
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
.....+....+.+.|+..++..+..
T Consensus 83 --~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 83 --SETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp --HHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred --HHHHHHHHHHHHHCCCCeEEEEECC
Confidence 1122344555667787776655443
No 470
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=44.15 E-value=29 Score=34.16 Aligned_cols=85 Identities=16% Similarity=0.091 Sum_probs=59.0
Q ss_pred CCeEEEEcCCCChhhHHHHhC-CCCeEEEecCCCC----------CCeEEEcCCCCCCC-CCCceeEEEcccc------h
Q 027039 97 HSKVLCVSAGAGHEVMAFNSI-GVADVTGVELMDS----------LPLVSRADPHNLPF-FDEAFDVAFTAHL------A 158 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~-g~~~v~~vD~s~~----------~~~~~~~d~~~~~~-~~~~fD~V~~~~~------~ 158 (229)
+..+||+|+|+-. .-|.-. +...|+.+|.-|. +-++++.|...-.+ -...+|.+.|... .
T Consensus 828 ~~~~lDLGTGPEc--RiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~~~~~~d~vtailSLGAA~a~ 905 (1299)
T 3iyl_W 828 LAHLLDLGTGPEC--RILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFWNGIRCDSATAIFTIGAAAAA 905 (1299)
T ss_dssp GCSEEEETCCSSC--SGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGGSSCCCSEEEETTTHHHHHHH
T ss_pred CCEEEEcCCCccc--eeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeEecCCCCEEEEeeechhhhhh
Confidence 4899999888643 334444 4568999998876 24599999877443 3468899988621 2
Q ss_pred hhhCHHHHHHHHHhccccCc--EEEEE
Q 027039 159 EALFPSRFVGEMERTVKIGG--VCMVL 183 (229)
Q Consensus 159 ~~~~~~~~l~~~~~~LkpgG--~lil~ 183 (229)
...+..+.++++.+.+++.| ++++-
T Consensus 906 a~~tl~~~l~~~l~~~~~~~v~~l~lQ 932 (1299)
T 3iyl_W 906 AGTDLIAFVQQLIPRIVAAGGTRMWLQ 932 (1299)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcCceEEEEE
Confidence 22267889999999998877 44443
No 471
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=43.68 E-value=45 Score=29.26 Aligned_cols=108 Identities=13% Similarity=0.160 Sum_probs=64.1
Q ss_pred CCCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCC--------e--------------------EEEcCCCCCCCC
Q 027039 96 NHSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLP--------L--------------------VSRADPHNLPFF 145 (229)
Q Consensus 96 ~~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~--------~--------------------~~~~d~~~~~~~ 145 (229)
+-.+|.=||+|. +..+..++..|+ +|+.+|.+++.. + ....|...
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~a---- 127 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHK---- 127 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGG----
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHH----
Confidence 346899999986 455666777788 999999987610 0 01122211
Q ss_pred CCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeeee
Q 027039 146 DEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANVT 211 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~~ 211 (229)
-...|+|+..-.....-..++++++...++|+..++-.++ ..+..++.+..+ ..+++..+-+.
T Consensus 128 l~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTS---sl~i~~ia~~~~~p~r~iG~Hffn 191 (460)
T 3k6j_A 128 LSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTS---SLDLNEISSVLRDPSNLVGIHFFN 191 (460)
T ss_dssp CTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCS---SSCHHHHHTTSSSGGGEEEEECCS
T ss_pred HccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCC---ChhHHHHHHhccCCcceEEEEecc
Confidence 2457888874322211246788899999999987543333 344555554443 23566655443
No 472
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.46 E-value=15 Score=30.04 Aligned_cols=103 Identities=14% Similarity=-0.006 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEE-cCC---CCCCCCCCceeEEEcccchhhhCHHHHH--
Q 027039 96 NHSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSR-ADP---HNLPFFDEAFDVAFTAHLAEALFPSRFV-- 167 (229)
Q Consensus 96 ~~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~-~d~---~~~~~~~~~fD~V~~~~~~~~~~~~~~l-- 167 (229)
..++|.=||+|. | ..+..+++.|+ +|+++|.+++..+-.. ... .+..-.-...|+|+..- .......+++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~v-p~~~~~~~v~~~ 97 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAML-SDPCAALSVVFD 97 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECC-SSHHHHHHHHHS
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEc-CCHHHHHHHHhC
Confidence 446899999885 2 34455566687 9999999887443111 000 01000012468888632 1101123344
Q ss_pred -HHHHhccccCcEEEEEeecCCcccHHHHHHHHhc
Q 027039 168 -GEMERTVKIGGVCMVLMEECAGREIKQIVELFRT 201 (229)
Q Consensus 168 -~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~ 201 (229)
.++...+++|..++ ..........+.+.+.+..
T Consensus 98 ~~~l~~~l~~g~~vv-~~st~~~~~~~~~~~~~~~ 131 (310)
T 3doj_A 98 KGGVLEQICEGKGYI-DMSTVDAETSLKINEAITG 131 (310)
T ss_dssp TTCGGGGCCTTCEEE-ECSCCCHHHHHHHHHHHHH
T ss_pred chhhhhccCCCCEEE-ECCCCCHHHHHHHHHHHHH
Confidence 45556677776544 4444333344555555553
No 473
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=43.27 E-value=80 Score=27.48 Aligned_cols=105 Identities=15% Similarity=0.190 Sum_probs=60.7
Q ss_pred CCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe-----------------------------EEEcCCCCCCCC
Q 027039 97 HSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL-----------------------------VSRADPHNLPFF 145 (229)
Q Consensus 97 ~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~-----------------------------~~~~d~~~~~~~ 145 (229)
-.+|.-||+|. | ..+..++..|+ +|+.+|.+++..+ -+..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~---- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE---- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGG----
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHH----
Confidence 35799999987 3 45555666687 9999999875221 01112211
Q ss_pred CCceeEEEcccchhhh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeee
Q 027039 146 DEAFDVAFTAHLAEAL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANV 210 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~ 210 (229)
-...|+|+..-. +.. ...++++++...++||..++. .....+..++.+..+ ..+++..+-+
T Consensus 112 ~~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~s---nTs~~~~~~la~~~~~~~~~ig~hf~ 174 (463)
T 1zcj_A 112 LSTVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLCT---NTSALNVDDIASSTDRPQLVIGTHFF 174 (463)
T ss_dssp GTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEEE---CCSSSCHHHHHTTSSCGGGEEEEEEC
T ss_pred HCCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEEe---CCCCcCHHHHHHHhcCCcceEEeecC
Confidence 135788887432 212 236678888888988876542 222334445555443 2345555544
No 474
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=43.18 E-value=12 Score=30.09 Aligned_cols=102 Identities=16% Similarity=0.080 Sum_probs=53.8
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEEc-CC---CCCCCCCCceeEEEcccchhhhCHHHHH---H
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSRA-DP---HNLPFFDEAFDVAFTAHLAEALFPSRFV---G 168 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~~-d~---~~~~~~~~~fD~V~~~~~~~~~~~~~~l---~ 168 (229)
++|.=||+|. | ..+..+...|+ +|+.+|.+++..+-... .. .+..-.-...|+|+..-- .......++ +
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~~~~~~~~ 83 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLP-NSPHVKEVALGEN 83 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCS-SHHHHHHHHHSTT
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECC-CHHHHHHHHhCcc
Confidence 4799999886 2 34444556676 89999988653221000 00 011000124788887421 111123344 4
Q ss_pred HHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
++...++||..++ .+........+.+.+.++..
T Consensus 84 ~l~~~l~~~~~vv-~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 84 GIIEGAKPGTVLI-DMSSIAPLASREISDALKAK 116 (299)
T ss_dssp CHHHHCCTTCEEE-ECSCCCHHHHHHHHHHHHTT
T ss_pred hHhhcCCCCCEEE-ECCCCCHHHHHHHHHHHHHc
Confidence 5667788887643 44433323355677777653
No 475
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=43.10 E-value=23 Score=30.90 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCChhhHHHHhC----C--CCeEEEecCCCC
Q 027039 97 HSKVLCVSAGAGHEVMAFNSI----G--VADVTGVELMDS 130 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~----g--~~~v~~vD~s~~ 130 (229)
...|+|+|+|+|.++..+... + ..++..+|+|+.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~ 177 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGE 177 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSS
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHH
Confidence 479999999999987776432 2 237999999987
No 476
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=42.79 E-value=37 Score=26.33 Aligned_cols=88 Identities=14% Similarity=-0.011 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCChhhH----HHHh-CCCCeEEEecCCCC--------------CCeEEEcCCCCCC-----CC-----C
Q 027039 96 NHSKVLCVSAGAGHEVM----AFNS-IGVADVTGVELMDS--------------LPLVSRADPHNLP-----FF-----D 146 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~----~l~~-~g~~~v~~vD~s~~--------------~~~~~~~d~~~~~-----~~-----~ 146 (229)
.+.+||=.|++ |..+. .|++ .|+ +|+.++.++. .+.++.+|+.+.. +. .
T Consensus 3 ~~k~vlITGas-ggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45677766654 44444 4556 676 8888877632 3567888887632 00 1
Q ss_pred CceeEEEcccc-h----------hhh---------CHHHHHHHHHhccccCcEEEEEee
Q 027039 147 EAFDVAFTAHL-A----------EAL---------FPSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 147 ~~fD~V~~~~~-~----------~~~---------~~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+.+|+|+.+.- . ... -+..+++.+.+.++++|+++.+.+
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 37899987621 1 000 013345666677777788775544
No 477
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=42.60 E-value=58 Score=25.94 Aligned_cols=59 Identities=19% Similarity=0.209 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC------------CCeEEEcCCCCCC-----CCCCceeEEEcc
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS------------LPLVSRADPHNLP-----FFDEAFDVAFTA 155 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~------------~~~~~~~d~~~~~-----~~~~~fD~V~~~ 155 (229)
.|..+|-=|++.| ..+..|++.|. +|..+|.+.. ....+++|+.+.. +..+..|+++.|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 4667777777776 35566677787 8888888754 2336777876532 445789999987
No 478
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.57 E-value=35 Score=27.08 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCC---------------CCeEEEcCCCCCC-----CC-----C
Q 027039 95 FNHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDS---------------LPLVSRADPHNLP-----FF-----D 146 (229)
Q Consensus 95 ~~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~---------------~~~~~~~d~~~~~-----~~-----~ 146 (229)
..+.++|=.|++.| ..+..|++.|. +|+.++.... ...++++|+.+.. +. -
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678888888776 34555666687 7776643322 3447778887632 00 1
Q ss_pred CceeEEEcccch------hhhC--------------HHHHHHHHHhccccCcEEEEEee
Q 027039 147 EAFDVAFTAHLA------EALF--------------PSRFVGEMERTVKIGGVCMVLME 185 (229)
Q Consensus 147 ~~fD~V~~~~~~------~~~~--------------~~~~l~~~~~~LkpgG~lil~~~ 185 (229)
+..|+++.+.-. .... +..+++.+.+.++++|+++.+.+
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 479999987211 0001 13345677777888898886654
No 479
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=42.48 E-value=1.2e+02 Score=23.59 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=37.7
Q ss_pred CCCeEEEEcCCC-ChhhH----HHHhCCCCeEEEecCCCC-------------CCeEEEcCCCCCC----------CCCC
Q 027039 96 NHSKVLCVSAGA-GHEVM----AFNSIGVADVTGVELMDS-------------LPLVSRADPHNLP----------FFDE 147 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~~~~----~l~~~g~~~v~~vD~s~~-------------~~~~~~~d~~~~~----------~~~~ 147 (229)
.+.++|-.|+++ |..+. .|++.|+ +|+.+|.++. ...++++|+.+.. -.-+
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 456788888762 44444 4555687 8998887651 1246778887632 0124
Q ss_pred ceeEEEcc
Q 027039 148 AFDVAFTA 155 (229)
Q Consensus 148 ~fD~V~~~ 155 (229)
..|+++.+
T Consensus 87 ~iD~lv~~ 94 (265)
T 1qsg_A 87 KFDGFVHS 94 (265)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 78999987
No 480
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=42.25 E-value=83 Score=24.89 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=45.5
Q ss_pred CeEEEEcCCCChhhHHHH----hCCCCeEEE-ecCCCCCC-eE-EEcCCCCCCCCCCceeEEEcccchhhhCHHHHHHHH
Q 027039 98 SKVLCVSAGAGHEVMAFN----SIGVADVTG-VELMDSLP-LV-SRADPHNLPFFDEAFDVAFTAHLAEALFPSRFVGEM 170 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~----~~g~~~v~~-vD~s~~~~-~~-~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l~~~ 170 (229)
.+|.=+|| |..+..+. +.+. ++++ +|.++... .+ +..|..++ . ..|+|+-. . .|......+
T Consensus 4 mkI~ViGa--GrMG~~i~~~l~~~~~-eLva~~d~~~~~~~gv~v~~dl~~l---~-~~DVvIDf--t---~p~a~~~~~ 71 (243)
T 3qy9_A 4 MKILLIGY--GAMNQRVARLAEEKGH-EIVGVIENTPKATTPYQQYQHIADV---K-GADVAIDF--S---NPNLLFPLL 71 (243)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTC-EEEEEECSSCC--CCSCBCSCTTTC---T-TCSEEEEC--S---CHHHHHHHH
T ss_pred eEEEEECc--CHHHHHHHHHHHhCCC-EEEEEEecCccccCCCceeCCHHHH---h-CCCEEEEe--C---ChHHHHHHH
Confidence 58999999 55555543 3466 7766 68775421 00 11222222 2 67887732 1 255555555
Q ss_pred HhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 171 ERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 171 ~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
. ++.|=.+++.+.........++.++.++.
T Consensus 72 ~--l~~g~~vVigTTG~s~e~~~~l~~aa~~~ 101 (243)
T 3qy9_A 72 D--EDFHLPLVVATTGEKEKLLNKLDELSQNM 101 (243)
T ss_dssp T--SCCCCCEEECCCSSHHHHHHHHHHHTTTS
T ss_pred H--HhcCCceEeCCCCCCHHHHHHHHHHHhcC
Confidence 3 66655555444332222334445544443
No 481
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=41.82 E-value=46 Score=27.50 Aligned_cols=35 Identities=6% Similarity=0.095 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCCChhhHHHHhC-C----CCeEEEecCCCC
Q 027039 96 NHSKVLCVSAGAGHEVMAFNSI-G----VADVTGVELMDS 130 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~~~-g----~~~v~~vD~s~~ 130 (229)
.+..|+=+|||.|.....|++. + ..+...+|+.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 4679999999999999888876 2 248999999764
No 482
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=41.38 E-value=13 Score=30.83 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=63.1
Q ss_pred CCeEEEEcCCC--ChhhHHHHhCCCCeEEEecCCCCCCeEE-------------Ec----C-----------C-CCCCCC
Q 027039 97 HSKVLCVSAGA--GHEVMAFNSIGVADVTGVELMDSLPLVS-------------RA----D-----------P-HNLPFF 145 (229)
Q Consensus 97 ~~~vLDiG~G~--G~~~~~l~~~g~~~v~~vD~s~~~~~~~-------------~~----d-----------~-~~~~~~ 145 (229)
-.+|--||+|. +..+..++..|+ +|+++|.+++.++-. .+ . . .++.-.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 35788899886 345666677788 999999997632210 00 0 0 011000
Q ss_pred CCceeEEEcccchhhhCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHh-cCceeEeeeee
Q 027039 146 DEAFDVAFTAHLAEALFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFR-TSRFVDAANVT 211 (229)
Q Consensus 146 ~~~fD~V~~~~~~~~~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~-~~~~~~~~~~~ 211 (229)
-...|+|+..-.........+++++...++|+..++-.++ ..+..++.+..+ ..+++..+-+.
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS---~i~~~~la~~~~~~~r~ig~Hp~~ 148 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSS---CLLPSKLFTGLAHVKQCIVAHPVN 148 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCS---SCCHHHHHTTCTTGGGEEEEEECS
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCC---ChHHHHHHHhcCCCCCeEEeecCC
Confidence 1457888874221111235678889999998886442222 345556655543 34666666554
No 483
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=40.61 E-value=30 Score=27.27 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=45.7
Q ss_pred CCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe-------E-EEcCCCCCCCCCCceeEEEcccchhhhCHHHH
Q 027039 97 HSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL-------V-SRADPHNLPFFDEAFDVAFTAHLAEALFPSRF 166 (229)
Q Consensus 97 ~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~-------~-~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~ 166 (229)
+++|.=||+|. | ..+..++..|+..|+.+|.+++..+ . ...+..+. -...|+|+..--... ..++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~Dvvi~av~~~~--~~~v 84 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEV---NPYAKLYIVSLKDSA--FAEL 84 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGS---CSCCSEEEECCCHHH--HHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHH---hcCCCEEEEecCHHH--HHHH
Confidence 46899999874 2 2344445557733889998865221 1 12222222 135799987532221 2566
Q ss_pred HHHHHhccccCcEEE
Q 027039 167 VGEMERTVKIGGVCM 181 (229)
Q Consensus 167 l~~~~~~LkpgG~li 181 (229)
+.++...+++|..++
T Consensus 85 ~~~l~~~~~~~~ivv 99 (266)
T 3d1l_A 85 LQGIVEGKREEALMV 99 (266)
T ss_dssp HHHHHTTCCTTCEEE
T ss_pred HHHHHhhcCCCcEEE
Confidence 677777777776544
No 484
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=40.17 E-value=7.1 Score=20.27 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=13.3
Q ss_pred ChHHHHHHHHHHHHHHHHHH
Q 027039 1 MERHVEALLRKISYGAITIA 20 (229)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (229)
|||..+.|.-++.+++|++.
T Consensus 1 m~~n~qELf~NFt~vLI~vl 20 (31)
T 1jdm_A 1 MGINTRELFLNFTIVLITVI 20 (31)
T ss_dssp CCSCSSSSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHH
Confidence 67777777667777755443
No 485
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=39.74 E-value=33 Score=26.11 Aligned_cols=84 Identities=14% Similarity=0.034 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCC---hhhHHHHhCCCCeEEEecCCCCCCeEEEcCCCCCC-----CC-CCceeEEEcccchh-------
Q 027039 96 NHSKVLCVSAGAG---HEVMAFNSIGVADVTGVELMDSLPLVSRADPHNLP-----FF-DEAFDVAFTAHLAE------- 159 (229)
Q Consensus 96 ~~~~vLDiG~G~G---~~~~~l~~~g~~~v~~vD~s~~~~~~~~~d~~~~~-----~~-~~~fD~V~~~~~~~------- 159 (229)
.+.++|=.|++.| ..+..|++.|. +|+.++.++. +|+.+.. +. -+..|+++.+.-..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~ 77 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG------LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVV 77 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcc
Confidence 3567787887765 23444455576 8888877654 3443311 00 04688888762110
Q ss_pred hhC--------------HHHHHHHHHhccccCcEEEEEeec
Q 027039 160 ALF--------------PSRFVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 160 ~~~--------------~~~~l~~~~~~LkpgG~lil~~~~ 186 (229)
... +..+.+.+.+.++++|.++.+.+.
T Consensus 78 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 78 DVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred cCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 001 233556777778888988766543
No 486
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=39.12 E-value=22 Score=25.60 Aligned_cols=87 Identities=14% Similarity=0.061 Sum_probs=46.0
Q ss_pred CCCCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCCC---------CeEEEcCCCCCC----CCCCceeEEEcccchh
Q 027039 95 FNHSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDSL---------PLVSRADPHNLP----FFDEAFDVAFTAHLAE 159 (229)
Q Consensus 95 ~~~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~~---------~~~~~~d~~~~~----~~~~~fD~V~~~~~~~ 159 (229)
.++.+|+=+|+|. |. .+..+...|. +|+++|.++.. ..++.+|..+.. ..-..+|+|+...-..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 5678999999864 32 2233344476 99999987652 224445543311 1124688888642111
Q ss_pred hhCHHHHHHHHHhccccCcEEEEEe
Q 027039 160 ALFPSRFVGEMERTVKIGGVCMVLM 184 (229)
Q Consensus 160 ~~~~~~~l~~~~~~LkpgG~lil~~ 184 (229)
.....+..+.+.+.|...++..+
T Consensus 96 --~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 96 --STNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp --HHHHHHHHHHHHTSCCSEEEEEC
T ss_pred --HHHHHHHHHHHHHCCCCeEEEEE
Confidence 12233334444455555655443
No 487
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=38.89 E-value=94 Score=23.14 Aligned_cols=84 Identities=14% Similarity=0.079 Sum_probs=48.7
Q ss_pred CeEEEEcCCCChhhHHH----HhCCCCeEEEecCCC--------CCCeEEEcCCCCCCC-CCCceeEEEcccch-hh---
Q 027039 98 SKVLCVSAGAGHEVMAF----NSIGVADVTGVELMD--------SLPLVSRADPHNLPF-FDEAFDVAFTAHLA-EA--- 160 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l----~~~g~~~v~~vD~s~--------~~~~~~~~d~~~~~~-~~~~fD~V~~~~~~-~~--- 160 (229)
++||=.|+ +|..+..+ .+.|+ +|++++.++ ..+.++.+|+.+... .-+.+|+|+.+.-. +.
T Consensus 1 MkilVtGa-tG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGA-TGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcC-CCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 35777775 45555554 44476 999998774 356788888876431 11468999876321 11
Q ss_pred h-CHHHHHHHHHhcccc-CcEEEEE
Q 027039 161 L-FPSRFVGEMERTVKI-GGVCMVL 183 (229)
Q Consensus 161 ~-~~~~~l~~~~~~Lkp-gG~lil~ 183 (229)
. ........+.+.++. |++++++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 1 123344555555544 4666655
No 488
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=38.54 E-value=20 Score=31.77 Aligned_cols=46 Identities=22% Similarity=0.144 Sum_probs=36.8
Q ss_pred CCeEEEEcCCCChhhHHHHhCCCCeEEEecCCCCC-------------CeEEEcCCCCC
Q 027039 97 HSKVLCVSAGAGHEVMAFNSIGVADVTGVELMDSL-------------PLVSRADPHNL 142 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~~~g~~~v~~vD~s~~~-------------~~~~~~d~~~~ 142 (229)
..+++|+=||.|.+...+...|+..+.++|+++.. ..++.+|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCCCcceeccchhhh
Confidence 46899999999999999988888678999998752 23566777654
No 489
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=37.97 E-value=11 Score=31.96 Aligned_cols=106 Identities=9% Similarity=-0.020 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCeEEEcCC---CCCCCCCCceeEEEcccchhhhCHHHHH-
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLVSRADP---HNLPFFDEAFDVAFTAHLAEALFPSRFV- 167 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~~~~~d~---~~~~~~~~~fD~V~~~~~~~~~~~~~~l- 167 (229)
.+.+|.=||.| ..+..++ ..|. +|++.|.++.........+ .++.-.-...|+|+..--.. .....++
T Consensus 167 ~g~tvGIIG~G--~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t-~~t~~li~ 242 (347)
T 1mx3_A 167 RGETLGIIGLG--RVGQAVALRAKAFGF-NVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLN-EHNHHLIN 242 (347)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHTTTC-EEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCC-TTCTTSBS
T ss_pred CCCEEEEEeEC--HHHHHHHHHHHHCCC-EEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCC-HHHHHHhH
Confidence 56789899876 4444443 3376 8999998765311000001 01100013578888741110 0001111
Q ss_pred HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCceeE
Q 027039 168 GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFVD 206 (229)
Q Consensus 168 ~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~~ 206 (229)
.+....+|||..++ .+......+.+.+.+.++..++..
T Consensus 243 ~~~l~~mk~gailI-N~arg~~vd~~aL~~aL~~g~i~g 280 (347)
T 1mx3_A 243 DFTVKQMRQGAFLV-NTARGGLVDEKALAQALKEGRIRG 280 (347)
T ss_dssp HHHHTTSCTTEEEE-ECSCTTSBCHHHHHHHHHHTSEEE
T ss_pred HHHHhcCCCCCEEE-ECCCChHHhHHHHHHHHHhCCCcE
Confidence 34556788887655 666666667778888887765543
No 490
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=37.81 E-value=1.4e+02 Score=26.39 Aligned_cols=84 Identities=10% Similarity=-0.059 Sum_probs=52.9
Q ss_pred CeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCC----eEEEcCCCCCC----CCCCceeEEEcccchhhhCHHH
Q 027039 98 SKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLP----LVSRADPHNLP----FFDEAFDVAFTAHLAEALFPSR 165 (229)
Q Consensus 98 ~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~----~~~~~d~~~~~----~~~~~fD~V~~~~~~~~~~~~~ 165 (229)
.+++=+|+| ..+..++ +.|. +|+.+|.+++.. .++.+|..+.. ..-..+|.+++..-... ---
T Consensus 349 ~~viIiG~G--~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~--~ni 423 (565)
T 4gx0_A 349 ELIFIIGHG--RIGCAAAAFLDRKPV-PFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDS--TNI 423 (565)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTC-CEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHH--HHH
T ss_pred CCEEEECCC--HHHHHHHHHHHHCCC-CEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCch--HHH
Confidence 778888775 5555544 4466 999999998854 48889987743 12357898887522221 222
Q ss_pred HHHHHHhccccCcEEEEEeec
Q 027039 166 FVGEMERTVKIGGVCMVLMEE 186 (229)
Q Consensus 166 ~l~~~~~~LkpgG~lil~~~~ 186 (229)
+.....+.+.|.-.++.-+..
T Consensus 424 ~~~~~ak~l~~~~~iiar~~~ 444 (565)
T 4gx0_A 424 FLTLACRHLHSHIRIVARANG 444 (565)
T ss_dssp HHHHHHHHHCSSSEEEEEESS
T ss_pred HHHHHHHHHCCCCEEEEEECC
Confidence 344556667777676655544
No 491
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=37.78 E-value=10 Score=31.76 Aligned_cols=101 Identities=11% Similarity=0.077 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCe-EE-EcCCCCCCCCCCceeEEEcccchhhhCHHHHH-H
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPL-VS-RADPHNLPFFDEAFDVAFTAHLAEALFPSRFV-G 168 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~-~~-~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~~l-~ 168 (229)
.+.+|.=||+| ..+..++ ..|. +|+++|.++.... +. ..+..++ -...|+|+..--.. .....++ +
T Consensus 163 ~g~~vgIIG~G--~iG~~vA~~l~~~G~-~V~~~dr~~~~~~g~~~~~~l~el---l~~aDvVil~vP~~-~~t~~li~~ 235 (333)
T 3ba1_A 163 SGKRVGIIGLG--RIGLAVAERAEAFDC-PISYFSRSKKPNTNYTYYGSVVEL---ASNSDILVVACPLT-PETTHIINR 235 (333)
T ss_dssp TTCCEEEECCS--HHHHHHHHHHHTTTC-CEEEECSSCCTTCCSEEESCHHHH---HHTCSEEEECSCCC-GGGTTCBCH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHHCCC-EEEEECCCchhccCceecCCHHHH---HhcCCEEEEecCCC-hHHHHHhhH
Confidence 46689999887 4444443 3376 8999998876432 11 1111111 13578888751110 0001111 2
Q ss_pred HHHhccccCcEEEEEeecCCcccHHHHHHHHhcCce
Q 027039 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRF 204 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~ 204 (229)
+....+|||..++ .+......+...+.+.++..++
T Consensus 236 ~~l~~mk~gailI-n~srG~~vd~~aL~~aL~~g~i 270 (333)
T 3ba1_A 236 EVIDALGPKGVLI-NIGRGPHVDEPELVSALVEGRL 270 (333)
T ss_dssp HHHHHHCTTCEEE-ECSCGGGBCHHHHHHHHHHTSS
T ss_pred HHHhcCCCCCEEE-ECCCCchhCHHHHHHHHHcCCC
Confidence 3445678887764 6655555556677777765443
No 492
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=37.73 E-value=71 Score=28.00 Aligned_cols=57 Identities=19% Similarity=0.066 Sum_probs=38.9
Q ss_pred CCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCeEEEcCCCCCC-CCCCceeEEEcc
Q 027039 97 HSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLVSRADPHNLP-FFDEAFDVAFTA 155 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~~~~~d~~~~~-~~~~~fD~V~~~ 155 (229)
+++||=.| |+|..+..++ +.|+ +|++++.++.....+.+|..+.- -.-..+|+|+..
T Consensus 147 ~m~VLVTG-atG~IG~~l~~~L~~~G~-~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITG-SRGLVGRALTAQLQTGGH-EVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTC-EEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCC-EEEEEECCCCCccceeecccchhHHhcCCCCEEEEC
Confidence 67899777 4466665554 4477 99999988776666777766421 112468999865
No 493
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=37.68 E-value=7.5 Score=34.28 Aligned_cols=86 Identities=10% Similarity=0.022 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCCC-ChhhHHHH-hCCCCeEEEecCCCCCC------eEEEcCCCCCCCCCCceeEEEcccchhhhCHHH
Q 027039 94 LFNHSKVLCVSAGA-GHEVMAFN-SIGVADVTGVELMDSLP------LVSRADPHNLPFFDEAFDVAFTAHLAEALFPSR 165 (229)
Q Consensus 94 ~~~~~~vLDiG~G~-G~~~~~l~-~~g~~~v~~vD~s~~~~------~~~~~d~~~~~~~~~~fD~V~~~~~~~~~~~~~ 165 (229)
.-.|.+|+=+|+|. |......+ ..|. +|+++|.++... .+...+..+. -...|+|+...-..++
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~vv~LeEl---L~~ADIVv~atgt~~l---- 315 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEVVTLDDA---ASTADIVVTTTGNKDV---- 315 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECCHHHH---GGGCSEEEECCSSSSS----
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCceeccHHHH---HhhCCEEEECCCCccc----
Confidence 35788999999885 33322222 2376 999999876411 1212222221 1367888864211111
Q ss_pred HHHHHHhccccCcEEEEEeecCC
Q 027039 166 FVGEMERTVKIGGVCMVLMEECA 188 (229)
Q Consensus 166 ~l~~~~~~LkpgG~lil~~~~~~ 188 (229)
+-.+....+|||+.++ .+...+
T Consensus 316 I~~e~l~~MK~GAILI-NvGRgd 337 (464)
T 3n58_A 316 ITIDHMRKMKDMCIVG-NIGHFD 337 (464)
T ss_dssp BCHHHHHHSCTTEEEE-ECSSST
T ss_pred cCHHHHhcCCCCeEEE-EcCCCC
Confidence 1145667789999876 555433
No 494
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=37.53 E-value=27 Score=29.52 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCe------EEEc-CCCCCCCCCCceeEEEcccc----hhh
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPL------VSRA-DPHNLPFFDEAFDVAFTAHL----AEA 160 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~------~~~~-d~~~~~~~~~~fD~V~~~~~----~~~ 160 (229)
.+++|.=||.|. .+..++ ..|. +|++.|.++...+ +... +..++ -...|+|+..-- ..+
T Consensus 163 ~gktvGIIG~G~--IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~l~el---l~~aDvV~l~~Plt~~t~~ 236 (351)
T 3jtm_A 163 EGKTIGTVGAGR--IGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFVEDLNEM---LPKCDVIVINMPLTEKTRG 236 (351)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEECSCHHHH---GGGCSEEEECSCCCTTTTT
T ss_pred cCCEEeEEEeCH--HHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEcCCHHHH---HhcCCEEEECCCCCHHHHH
Confidence 577899998874 444433 3377 8999998864322 1111 11111 146799887511 111
Q ss_pred hCHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 161 LFPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 161 ~~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
+. -.+....+|||..++ -+.....-+...+.+.++..++.
T Consensus 237 li----~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 237 MF----NKELIGKLKKGVLIV-NNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp CB----SHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hh----cHHHHhcCCCCCEEE-ECcCchhhCHHHHHHHHHhCCcc
Confidence 11 134556688988766 66665555677788888766654
No 495
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=37.47 E-value=58 Score=26.54 Aligned_cols=58 Identities=9% Similarity=0.008 Sum_probs=38.9
Q ss_pred CCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCC---------------CCCeEEEcCCCCCC-----CCCCceeEE
Q 027039 97 HSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMD---------------SLPLVSRADPHNLP-----FFDEAFDVA 152 (229)
Q Consensus 97 ~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~---------------~~~~~~~~d~~~~~-----~~~~~fD~V 152 (229)
.++||=.|+ +|..+..++ +.|+ +|++++.++ ..+.++.+|..+.. +.+..+|+|
T Consensus 10 ~~~IlVtGa-tG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGA-TGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECT-TSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEECC-CcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 357888885 466665554 4475 899998766 24678899987732 222268999
Q ss_pred Eccc
Q 027039 153 FTAH 156 (229)
Q Consensus 153 ~~~~ 156 (229)
+...
T Consensus 88 i~~a 91 (346)
T 3i6i_A 88 VSTV 91 (346)
T ss_dssp EECC
T ss_pred EECC
Confidence 9863
No 496
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=36.81 E-value=13 Score=31.15 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=56.5
Q ss_pred CCeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCe----EEEcCCCCCCCCCCceeEEEccc-c---hhhhCHHHH
Q 027039 97 HSKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPL----VSRADPHNLPFFDEAFDVAFTAH-L---AEALFPSRF 166 (229)
Q Consensus 97 ~~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~----~~~~d~~~~~~~~~~fD~V~~~~-~---~~~~~~~~~ 166 (229)
+.+|.=||.|. | ..+..+...|. +|++.|.++.... +...+..++ -...|+|+..- . ..++.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~g~~~~~l~el---l~~aDvV~l~~P~t~~t~~li---- 212 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDVVKREDLKEKGCVYTSLDEL---LKESDVISLHVPYTKETHHMI---- 212 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHTTCEECCHHHH---HHHCSEEEECCCCCTTTTTCB----
T ss_pred CceEEEECcCHHHHHHHHHHHHCcC-EEEEECCCcchhhHhcCceecCHHHH---HhhCCEEEEeCCCChHHHHhh----
Confidence 56899998874 2 23333344476 9999999876321 111121111 13578888741 1 11111
Q ss_pred HHHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 167 VGEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 167 l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
-.+....+|||..++ -+.....-+...+.+.++..++.
T Consensus 213 ~~~~l~~mk~gailI-N~aRg~~vd~~aL~~aL~~g~i~ 250 (334)
T 2pi1_A 213 NEERISLMKDGVYLI-NTARGKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp CHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHTTCEE
T ss_pred CHHHHhhCCCCcEEE-ECCCCcccCHHHHHHHHHhCCce
Confidence 134456678887755 66665555667777777766554
No 497
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=36.46 E-value=65 Score=25.58 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=51.3
Q ss_pred CeEEEEcCCC-C-hhhHHHHhCCCCeEEEecCCCCCCeEEEc-CCCCCC-CC--CCceeEEEcccchhhhCHHHHHH---
Q 027039 98 SKVLCVSAGA-G-HEVMAFNSIGVADVTGVELMDSLPLVSRA-DPHNLP-FF--DEAFDVAFTAHLAEALFPSRFVG--- 168 (229)
Q Consensus 98 ~~vLDiG~G~-G-~~~~~l~~~g~~~v~~vD~s~~~~~~~~~-d~~~~~-~~--~~~fD~V~~~~~~~~~~~~~~l~--- 168 (229)
++|.=||+|. | ..+..+...|+ +|+.+| +++..+-... ...... .. -...|+|+..- ........++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v-p~~~~~~~v~~~~~ 80 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMV-PDTPQVEDVLFGEH 80 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECC-SSHHHHHHHHHSTT
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEEC-CCHHHHHHHHhCch
Confidence 5788899886 3 34445556676 899999 8764431111 111000 00 02478888632 11111233443
Q ss_pred HHHhccccCcEEEEEeecCCcccHHHHHHHHhcC
Q 027039 169 EMERTVKIGGVCMVLMEECAGREIKQIVELFRTS 202 (229)
Q Consensus 169 ~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~ 202 (229)
++...+++|.. ++........+.+++.+.++..
T Consensus 81 ~l~~~l~~~~~-vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 81 GCAKTSLQGKT-IVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SSTTSCCTTEE-EEECSCCCHHHHHHHHHHHHTT
T ss_pred hHhhcCCCCCE-EEECCCCCHHHHHHHHHHHHHc
Confidence 45556766654 3344433223455666666653
No 498
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=42.69 E-value=7.4 Score=34.08 Aligned_cols=53 Identities=19% Similarity=0.202 Sum_probs=34.0
Q ss_pred CceeEEEcccchh----hh-CHHHHHHHHHhccccCcEEEEEeecCCcccHHHHHHHH
Q 027039 147 EAFDVAFTAHLAE----AL-FPSRFVGEMERTVKIGGVCMVLMEECAGREIKQIVELF 199 (229)
Q Consensus 147 ~~fD~V~~~~~~~----~~-~~~~~l~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~ 199 (229)
..+|+|+.+.-.. .+ .-.+.+.....++|+||.++++..+.++.....+.+.+
T Consensus 275 ~~~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~g~G~~~f~~~~ 332 (436)
T 2yjg_A 275 KPADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECADGHGGEGFYRWF 332 (436)
Confidence 5789999653111 11 23566777888999999999888875544433344433
No 499
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=36.30 E-value=13 Score=31.38 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCCChhhHHHH----hCCCCeEEEecCCCCCCeE----EEc-CCCCCCCCCCceeEEEccc-chhhhCHHH
Q 027039 96 NHSKVLCVSAGAGHEVMAFN----SIGVADVTGVELMDSLPLV----SRA-DPHNLPFFDEAFDVAFTAH-LAEALFPSR 165 (229)
Q Consensus 96 ~~~~vLDiG~G~G~~~~~l~----~~g~~~v~~vD~s~~~~~~----~~~-d~~~~~~~~~~fD~V~~~~-~~~~~~~~~ 165 (229)
.+.+|.=||.| ..+..++ ..|. +|++.|.++...+. ... +..++ -...|+|+..- ..... ..
T Consensus 172 ~gktvGIIGlG--~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~g~~~~~~l~el---l~~sDvV~l~~Plt~~T--~~ 243 (345)
T 4g2n_A 172 TGRRLGIFGMG--RIGRAIATRARGFGL-AIHYHNRTRLSHALEEGAIYHDTLDSL---LGASDIFLIAAPGRPEL--KG 243 (345)
T ss_dssp TTCEEEEESCS--HHHHHHHHHHHTTTC-EEEEECSSCCCHHHHTTCEECSSHHHH---HHTCSEEEECSCCCGGG--TT
T ss_pred CCCEEEEEEeC--hhHHHHHHHHHHCCC-EEEEECCCCcchhhhcCCeEeCCHHHH---HhhCCEEEEecCCCHHH--HH
Confidence 35688888877 4444443 3376 99999998643221 111 11111 13578888751 11100 01
Q ss_pred HH-HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 166 FV-GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 166 ~l-~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
++ .+....+|||..++ -+.....-+...+.+.++..++.
T Consensus 244 li~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 244 FLDHDRIAKIPEGAVVI-NISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp CBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HhCHHHHhhCCCCcEEE-ECCCCchhCHHHHHHHHHhCCce
Confidence 11 34556788888765 66665556677788888766654
No 500
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=36.14 E-value=6.2 Score=33.11 Aligned_cols=104 Identities=15% Similarity=0.167 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCC-Ch-hhHHHHhCCCCeEEEecCCCCCCe-EEEc-CCCCCCCCCCceeEEEccc-c---hhhhCHHHHH
Q 027039 96 NHSKVLCVSAGA-GH-EVMAFNSIGVADVTGVELMDSLPL-VSRA-DPHNLPFFDEAFDVAFTAH-L---AEALFPSRFV 167 (229)
Q Consensus 96 ~~~~vLDiG~G~-G~-~~~~l~~~g~~~v~~vD~s~~~~~-~~~~-d~~~~~~~~~~fD~V~~~~-~---~~~~~~~~~l 167 (229)
.+.+|.=||.|. |. .+..+...|. +|+++|.++.... +... ...++.-.-...|+|+..- . ..++. -
T Consensus 139 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li----~ 213 (324)
T 3hg7_A 139 KGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLF----T 213 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSB----C
T ss_pred ccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHh----H
Confidence 367888898885 32 3333444477 9999998865322 1000 0111100013578888741 0 01110 1
Q ss_pred HHHHhccccCcEEEEEeecCCcccHHHHHHHHhcCcee
Q 027039 168 GEMERTVKIGGVCMVLMEECAGREIKQIVELFRTSRFV 205 (229)
Q Consensus 168 ~~~~~~LkpgG~lil~~~~~~~~~~~~l~~l~~~~~~~ 205 (229)
.+....+|||..++ -+.....-+...+.+.++..++.
T Consensus 214 ~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~ 250 (324)
T 3hg7_A 214 ASRFEHCKPGAILF-NVGRGNAINEGDLLTALRTGKLG 250 (324)
T ss_dssp TTTTTCSCTTCEEE-ECSCGGGBCHHHHHHHHHTTSSS
T ss_pred HHHHhcCCCCcEEE-ECCCchhhCHHHHHHHHHcCCce
Confidence 23456789988766 66665555677788888766653
Done!