BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027041
(229 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|B Chain B, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|C Chain C, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|D Chain D, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|E Chain E, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|F Chain F, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|G Chain G, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|H Chain H, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
Length = 221
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Query: 91 DKMKHRFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVR 150
+++K FL FKK+K+ +N Y LA GQ+P FMV AC+DSRVCPS++L FQPGEAF+VR
Sbjct: 15 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 74
Query: 151 NVANMVPPCESGP-SETNAALEFAVNSVKVENILVIGHSRCGGIHALMSM 199
NVAN+VPP + + T AA+E+AV +KV NI+VIGHS CGGI L+S
Sbjct: 75 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSF 124
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3I|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|G Chain G, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|H Chain H, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|I Chain I, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|J Chain J, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|K Chain K, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|L Chain L, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
Length = 229
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ IAC+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIACSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
pdb|3E24|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
Length = 229
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLFIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|C Chain C, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|D Chain D, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|E Chain E, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|F Chain F, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E2A|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2W|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
Length = 229
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8D|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
Length = 229
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|B Chain B, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|C Chain C, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|D Chain D, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|E Chain E, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|F Chain F, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
Length = 221
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E2X|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E3F|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
pdb|3E3F|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
Length = 229
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C+DSR + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSDSRAPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1V|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1W|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
pdb|3E1W|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
Length = 229
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 90 FDKMKHRF---LSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEA 146
DK+K F S+ ++ EN +++ LAD Q P ++ I C++SRV + +PGE
Sbjct: 1 MDKIKQLFANNYSWAQRMKEENSTYFKELADHQTPHYLWIGCSNSRVPAEKLTNLEPGEL 60
Query: 147 FIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQD 201
F+ RNVAN V + + +++AV+ +K+E+I++ GH+ CGGIHA M+ +D
Sbjct: 61 FVHRNVANQVIHTDFNCL---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCJ|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCK|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCK|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCM|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCM|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCN|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCN|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCO|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
pdb|3UCO|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
Length = 227
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 111 HYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAAL 170
++ +A QAP+++ I CADSRV P+ + PGE F+ RNV N+V + + L
Sbjct: 30 YFSKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLV---SNKDLNCMSCL 86
Query: 171 EFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDPRSLGESNL 213
E+ V+ +K+++ILV GH CG A + P++ G +NL
Sbjct: 87 EYTVDHLKIKHILVCGHYNCGACKAGLVWH----PKTAGVTNL 125
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
pdb|3EYX|B Chain B, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
Length = 216
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 116 ADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVN 175
A GQ+P + I C+DSR N LG PGE F +NVAN+ C S A LEFA+
Sbjct: 40 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANI---CHSEDLTLKATLEFAII 95
Query: 176 SVKVENILVIGHSRCGGIHALMSMQDEEDPRSLGESNLCKILLEVGFLW 224
+KV +++ GH+ CGGI ++ Q E P+ + S+L K L ++ ++
Sbjct: 96 CLKVNKVIICGHTDCGGIKTCLTNQREALPK-VNCSHLYKYLDDIDTMY 143
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
pdb|3QY1|B Chain B, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
Length = 223
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALE 171
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V + + ++
Sbjct: 29 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCLSVVQ 85
Query: 172 FAVNSVKVENILVIGHSRCGGIHA 195
+AV+ ++VE+I++ GHS CGGI A
Sbjct: 86 YAVDVLEVEHIIICGHSGCGGIKA 109
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1T75|A Chain A, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|B Chain B, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|D Chain D, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|E Chain E, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|2ESF|A Chain A, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
pdb|2ESF|B Chain B, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
Length = 220
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALE 171
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V + + ++
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLN---CLSVVQ 82
Query: 172 FAVNSVKVENILVIGHSRCGGIHA 195
+AV+ ++VE+I++ GH CGG+ A
Sbjct: 83 YAVDVLEVEHIIICGHYGCGGVQA 106
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1I6O|B Chain B, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
Length = 220
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Query: 112 YQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALE 171
++ LA Q P+F+ I C+DSRV + G +PGE F+ RNVAN+V + + ++
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLN---CLSVVQ 82
Query: 172 FAVNSVKVENILVIGHSRCGGIHA 195
+AV+ ++VE+I++ GH CGG+ A
Sbjct: 83 YAVDVLEVEHIIICGHYGCGGVQA 106
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
pdb|1DDZ|B Chain B, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
Length = 496
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 99 SFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP 158
+++++ ++ E + LA+GQ+P+++ I CADSRV + +L GE F+ RN+AN
Sbjct: 45 AWRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIANQ--- 101
Query: 159 CESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALM 197
C + L++AV +KV++ILV GH CGG A +
Sbjct: 102 CIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAAL 140
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 99 SFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPP 158
+++++ ++ + + NLA Q P+ + I CADSRV + I+ GE F+ RN+AN
Sbjct: 299 NWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQ--- 355
Query: 159 CESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALM 197
C + L++AV +KV+ ++V GH CGG A +
Sbjct: 356 CIHSDMSFLSVLQYAVQYLKVKRVVVCGHYACGGCAAAL 394
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|B Chain B, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|C Chain C, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 239
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 118 GQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSV 177
GQAP F+ I CADSRV I+ +PG+ F+ RNVAN P + + A L +A+ +V
Sbjct: 58 GQAPNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPEDDS---SQALLNYAIMNV 114
Query: 178 KVENILVIGHSRCGGIHALMS--MQDEEDPRSLGESNLCKIL 217
V +++V+GH+ CGG A + EE+P G + L + L
Sbjct: 115 GVTHVMVVGHTGCGGCIAAFDQPLPTEENP---GGTPLVRYL 153
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 243
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 118 GQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSV 177
GQAP F+ I CADSRV I+ +PG+ F+ RNVAN P + + A L +A+ +V
Sbjct: 62 GQAPNFLWIGCADSRVPEVTIMARKPGDVFVQRNVANQFKPED---DSSQALLNYAIMNV 118
Query: 178 KVENILVIGHSRCGGIHALMS--MQDEEDPRSLGESNLCKIL 217
V +++V+GH+ CGG A + EE+P G + L + L
Sbjct: 119 GVTHVMVVGHTGCGGCIAAFDQPLPTEENP---GGTPLVRYL 157
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|B Chain B, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|C Chain C, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|D Chain D, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
Length = 213
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + Q ++++H LA GQ P ++ CADSRV I G+ F+VR ++
Sbjct: 25 RFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHV 84
Query: 156 VPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIH-ALMSMQDEEDP 205
+ G ++E+AV + V I+V+GH CG ++ AL ++ D P
Sbjct: 85 IDSAVLG------SIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLP 129
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From
Mycobacterium Tuberculosis
Length = 215
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 96 RFLSFKKQKFMENLEHYQNLADGQAPKFMVIACADSRVCPSNILGFQPGEAFIVRNVANM 155
RF++ + Q ++++H LA GQ P ++ CADSRV I G+ F+VR ++
Sbjct: 27 RFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHV 86
Query: 156 VPPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIH-ALMSMQDEEDP 205
+ G ++E+AV + V I+V+GH CG ++ AL ++ D P
Sbjct: 87 IDSAVLG------SIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLP 131
>pdb|1G5C|A Chain A, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|B Chain B, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|C Chain C, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|D Chain D, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|E Chain E, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|F Chain F, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
Length = 170
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 111 HYQNLAD-GQAPKFMVIACADSRVCP--SNILGFQPGEAFIVRNVANMVPPCESGPSETN 167
+++L+D +PK +I C DSR+ LG G+A +++N N+V + G +
Sbjct: 14 RFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIV---DDGVIRSA 70
Query: 168 AALEFAVNSVKVENILVIGHSRCG 191
A +A+ I+++GH+ CG
Sbjct: 71 AVAIYALGD---NEIIIVGHTDCG 91
>pdb|3VQJ|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase
pdb|3VRK|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase / Thiocyanate Complex
Length = 219
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVEN 181
+ V+AC D+R+ ++LG Q GEA I+RN ++ + L + + +
Sbjct: 38 RVAVVACMDARLDVEDLLGLQTGEAHIIRNAGGVI------NEDAIRCLIISHHLLNTHE 91
Query: 182 ILVIGHSRCG 191
I+++ H+RCG
Sbjct: 92 IILVHHTRCG 101
>pdb|3TEO|A Chain A, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|B Chain B, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|C Chain C, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|D Chain D, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|E Chain E, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|F Chain F, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|G Chain G, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|H Chain H, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|I Chain I, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|J Chain J, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|K Chain K, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|L Chain L, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|M Chain M, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|N Chain N, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|O Chain O, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|P Chain P, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
Length = 204
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVEN 181
+ V+ C D RV LG QP +A I RN +V + + +A+L N +
Sbjct: 29 RLWVLTCXDERVHIEQSLGIQPDDAHIYRNAGGIV----TDDAIRSASL--TTNFFGTKE 82
Query: 182 ILVIGHSRCGGI 193
I+V+ H+ CG +
Sbjct: 83 IIVVTHTDCGXL 94
>pdb|3TEN|A Chain A, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|B Chain B, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|C Chain C, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|D Chain D, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|E Chain E, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|F Chain F, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|G Chain G, Holo Form Of Carbon Disulfide Hydrolase
pdb|3TEN|H Chain H, Holo Form Of Carbon Disulfide Hydrolase
Length = 204
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVEN 181
+ V+ C D RV LG QP +A I RN +V + + +A+L N +
Sbjct: 29 RLWVLTCMDERVHIEQSLGIQPDDAHIYRNAGGIV----TDDAIRSASL--TTNFFGTKE 82
Query: 182 ILVIGHSRCG 191
I+V+ H+ CG
Sbjct: 83 IIVVTHTDCG 92
>pdb|1YLK|A Chain A, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|B Chain B, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|C Chain C, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|D Chain D, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
Length = 172
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 125 VIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVENILV 184
++AC D+R+ +LG + GEA ++RN +V + +L + + I++
Sbjct: 41 IVACMDARLDVYRMLGIKEGEAHVIRNAGCVV------TDDVIRSLAISQRLLGTREIIL 94
Query: 185 IGHSRCGGIHALMSMQDEEDPRSL 208
+ H+ CG +++ D++ R++
Sbjct: 95 LHHTDCG----MLTFTDDDFKRAI 114
>pdb|3LAS|A Chain A, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
pdb|3LAS|B Chain B, Crystal Structure Of Carbonic Anhydrase From Streptococcus
Mutans To 1.4 Angstrom Resolution
Length = 166
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 122 KFMVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVNSVKVEN 181
+ ++ C DSR+ + LG G+A I+RN V + +L + +
Sbjct: 32 RVAIVTCMDSRLHVAPALGLALGDAHILRNAGGRV------TDDVIRSLVISEQQLGTSE 85
Query: 182 ILVIGHSRCGG 192
I+V+ H+ CG
Sbjct: 86 IVVLHHTDCGA 96
>pdb|3QYF|A Chain A, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
pdb|3QYF|B Chain B, Crystal Structure Of The Crispr-Associated Protein Sso1393
From Sulfolobus Solfataricus
Length = 324
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 66 EGITQEFQVDKLETAAE--VENECDFFDKMKHRFLSFKKQKFMENLEHYQNLADGQAPKF 123
EGI E K ++ E E D FDK+ +R L FK+Q + E Y N G P+
Sbjct: 119 EGIRSELVTVKTISSEENFYEGIVDLFDKVIYRILKFKEQ----DNEVYINATPGLKPES 174
Query: 124 MVIACADSRVCPSNILGFQPGEAFIVRNVANMVPPCESGPSETNAALEFAVN 175
+ + A + ++++ ++ E V V PP P + + FA++
Sbjct: 175 IFLTLA-GLLAGADLIYYKYQEFNDV--VILPSPPITIRPKYLDWLIRFAIS 223
>pdb|3DH0|A Chain A, Crystal Structure Of A Sam Dependent Methyltransferase
From Aquifex Aeolicus
pdb|3DH0|B Chain B, Crystal Structure Of A Sam Dependent Methyltransferase
From Aquifex Aeolicus
Length = 219
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 157 PPCESGPSETNAALEFAVNSVKVENILVIGHSRCGGIHALMSMQDEEDP 205
PP E SE L ++V ++ +G C G++A++ Q+EE+P
Sbjct: 153 PPPEEVYSEWEVGLILEDAGIRVGRVVEVG-KYCFGVYAMIVKQEEENP 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,186,997
Number of Sequences: 62578
Number of extensions: 176306
Number of successful extensions: 365
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 28
length of query: 229
length of database: 14,973,337
effective HSP length: 95
effective length of query: 134
effective length of database: 9,028,427
effective search space: 1209809218
effective search space used: 1209809218
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)