Query 027043
Match_columns 229
No_of_seqs 146 out of 340
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 06:15:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7n_A Pantothenate kinase 1; 100.0 2.8E-63 9.7E-68 459.4 15.8 210 19-229 1-253 (360)
2 2ews_A Pantothenate kinase; PA 100.0 4.7E-42 1.6E-46 308.9 17.3 167 18-228 17-186 (287)
3 1hux_A Activator of (R)-2-hydr 98.5 2.1E-06 7.3E-11 75.1 13.4 135 22-209 4-157 (270)
4 4ehu_A Activator of 2-hydroxyi 98.2 3.6E-05 1.2E-09 66.3 15.5 137 22-210 2-156 (276)
5 2gup_A ROK family protein; sug 96.5 0.13 4.5E-06 44.0 16.2 107 21-168 4-137 (292)
6 3vgl_A Glucokinase; ROK family 96.5 0.051 1.7E-06 47.7 13.7 55 94-168 87-141 (321)
7 2ch5_A NAGK protein; transfera 96.2 0.26 8.8E-06 43.1 16.3 58 94-178 89-149 (347)
8 2aa4_A Mannac kinase, putative 96.0 0.33 1.1E-05 41.3 15.5 108 22-168 2-140 (289)
9 3bex_A Type III pantothenate k 95.9 0.086 3E-06 45.6 11.5 30 150-182 122-151 (249)
10 2ivn_A O-sialoglycoprotein end 95.8 0.19 6.7E-06 44.7 14.0 98 88-210 76-184 (330)
11 3epq_A Putative fructokinase; 95.7 0.12 4E-06 45.4 11.9 109 21-167 3-141 (302)
12 1saz_A Probable butyrate kinas 95.6 0.42 1.4E-05 43.3 15.4 17 23-39 4-20 (381)
13 3vov_A Glucokinase, hexokinase 95.6 0.23 7.9E-06 43.2 13.2 54 95-168 90-143 (302)
14 1z05_A Transcriptional regulat 95.2 0.65 2.2E-05 42.3 15.3 55 94-168 199-253 (429)
15 2e2o_A Hexokinase; acetate and 95.0 0.16 5.4E-06 43.7 10.1 94 23-161 4-118 (299)
16 2ap1_A Putative regulator prot 95.0 0.86 2.9E-05 39.6 14.9 53 96-168 113-165 (327)
17 4htl_A Beta-glucoside kinase; 94.9 0.29 1E-05 42.4 11.7 54 95-168 89-142 (297)
18 3r8e_A Hypothetical sugar kina 94.8 0.51 1.8E-05 41.2 13.2 55 94-168 108-163 (321)
19 3djc_A Type III pantothenate k 94.5 0.83 2.8E-05 39.9 13.6 31 150-182 125-155 (266)
20 1sz2_A Glucokinase, glucose ki 94.4 0.22 7.6E-06 43.8 9.8 120 16-163 9-152 (332)
21 2qm1_A Glucokinase; alpha-beta 94.4 0.72 2.5E-05 39.7 12.9 55 94-168 99-153 (326)
22 4db3_A Glcnac kinase, N-acetyl 94.4 0.35 1.2E-05 42.5 11.1 55 94-168 111-165 (327)
23 1zbs_A Hypothetical protein PG 94.0 0.88 3E-05 39.1 12.5 109 23-177 2-136 (291)
24 3mcp_A Glucokinase; structural 93.6 1.5 5.2E-05 39.7 14.0 105 96-209 101-232 (366)
25 2h3g_X Biosynthetic protein; p 92.6 2.1 7E-05 37.4 12.8 31 150-182 123-153 (268)
26 3htv_A D-allose kinase, alloki 92.5 1 3.4E-05 39.4 10.7 51 95-166 99-149 (310)
27 2yhw_A Bifunctional UDP-N-acet 92.5 2.3 7.7E-05 37.2 13.0 55 94-168 122-176 (343)
28 2hoe_A N-acetylglucosamine kin 92.3 1.8 6.1E-05 38.7 12.3 53 94-168 179-231 (380)
29 1z6r_A MLC protein; transcript 91.1 3.8 0.00013 36.7 13.1 55 94-168 177-231 (406)
30 1woq_A Inorganic polyphosphate 90.7 6.8 0.00023 32.9 14.0 54 95-168 106-160 (267)
31 1zc6_A Probable N-acetylglucos 89.7 6.7 0.00023 33.6 13.0 17 23-39 13-29 (305)
32 1zxo_A Conserved hypothetical 89.2 1.4 4.9E-05 37.8 8.3 57 94-177 75-134 (291)
33 2q2r_A Glucokinase 1, putative 88.8 2.6 8.9E-05 37.5 10.0 31 94-124 118-149 (373)
34 3h1q_A Ethanolamine utilizatio 76.9 9.1 0.00031 31.8 7.9 38 84-121 229-269 (272)
35 2yhx_A Hexokinase B; transfera 73.1 7.3 0.00025 36.5 6.9 24 18-41 58-81 (457)
36 4apw_A ALP12; actin-like prote 70.6 2.7 9.2E-05 37.1 3.2 42 84-125 281-323 (329)
37 1cza_N Hexokinase type I; stru 70.3 7 0.00024 39.6 6.5 23 18-40 75-97 (917)
38 1bdg_A Hexokinase; phosphotran 69.1 11 0.00036 35.2 7.0 23 19-41 66-88 (451)
39 3o8m_A Hexokinase; rnaseh-like 66.1 8 0.00027 36.7 5.6 23 19-41 78-100 (485)
40 3lm2_A Putative kinase; struct 62.2 13 0.00045 31.3 5.8 49 99-174 87-135 (226)
41 3eno_A Putative O-sialoglycopr 60.6 37 0.0013 30.0 8.7 91 95-210 95-190 (334)
42 2w40_A Glycerol kinase, putati 56.3 23 0.0008 32.7 6.9 19 23-41 6-24 (503)
43 2itm_A Xylulose kinase, xylulo 52.7 25 0.00087 32.2 6.4 18 23-40 2-19 (484)
44 2fsj_A Hypothetical protein TA 50.3 9.1 0.00031 33.8 2.9 42 84-125 299-343 (346)
45 1iv0_A Hypothetical protein; r 48.0 44 0.0015 24.6 5.9 77 22-112 2-93 (98)
46 1vhx_A Putative holliday junct 47.6 27 0.00091 27.6 5.0 92 21-124 3-110 (150)
47 2uyt_A Rhamnulokinase; rhamnos 47.2 12 0.0004 34.4 3.2 19 23-41 6-24 (489)
48 3ll3_A Gluconate kinase; xylul 46.6 12 0.00042 34.8 3.2 58 152-209 254-328 (504)
49 2dpn_A Glycerol kinase; thermu 45.9 12 0.0004 34.7 2.9 19 23-41 4-22 (495)
50 2wq4_A Lectin; LUNG, pathogen, 45.2 17 0.00059 28.8 3.4 42 129-179 71-115 (156)
51 2zf5_O Glycerol kinase; hypert 45.1 12 0.00042 34.5 3.0 19 23-41 5-23 (497)
52 3qfu_A 78 kDa glucose-regulate 44.9 14 0.00049 32.2 3.2 36 150-186 206-247 (394)
53 3h6e_A Carbohydrate kinase, FG 44.7 42 0.0014 31.2 6.6 17 23-39 8-24 (482)
54 3ifr_A Carbohydrate kinase, FG 42.8 15 0.00052 34.2 3.2 56 152-207 260-333 (508)
55 3cet_A Conserved archaeal prot 42.2 20 0.00069 32.5 3.8 18 22-39 1-18 (334)
56 2zgy_A Plasmid segregation pro 40.7 17 0.00057 31.4 3.0 39 84-122 275-317 (320)
57 1jce_A ROD shape-determining p 40.3 16 0.00054 31.5 2.8 42 84-125 280-324 (344)
58 3h3n_X Glycerol kinase; ATP-bi 39.8 18 0.00061 33.6 3.2 21 22-42 6-26 (506)
59 2d4w_A Glycerol kinase; alpha 38.9 17 0.00059 33.7 2.9 19 23-41 4-22 (504)
60 4e1j_A Glycerol kinase; struct 38.7 17 0.00059 33.9 2.9 19 23-41 28-46 (520)
61 3g25_A Glycerol kinase; IDP007 38.4 18 0.0006 33.5 2.9 20 23-42 8-27 (501)
62 3i33_A Heat shock-related 70 k 38.4 21 0.00073 31.4 3.4 21 20-40 22-42 (404)
63 3l0q_A Xylulose kinase; xlylul 38.3 19 0.00066 33.8 3.2 21 22-42 6-26 (554)
64 2p3r_A Glycerol kinase; glycer 37.5 19 0.00065 33.5 3.0 19 23-41 5-23 (510)
65 3i8b_A Xylulose kinase; strain 37.3 20 0.00069 33.5 3.2 55 152-208 288-358 (515)
66 2zgy_A Plasmid segregation pro 36.8 21 0.00072 30.7 3.0 43 150-192 164-210 (320)
67 1nu0_A Hypothetical protein YQ 36.1 1.4E+02 0.0048 23.1 7.5 89 22-123 4-107 (138)
68 3h1q_A Ethanolamine utilizatio 35.8 29 0.001 28.6 3.6 41 152-192 141-182 (272)
69 3hz6_A Xylulokinase; xylulose, 35.2 21 0.00073 33.2 2.9 56 152-207 258-334 (511)
70 3en9_A Glycoprotease, O-sialog 34.9 2.7E+02 0.0092 25.7 10.5 92 95-209 94-188 (540)
71 3jvp_A Ribulokinase; PSI-II, N 34.0 24 0.00083 33.3 3.2 19 22-40 6-24 (572)
72 3js6_A Uncharacterized PARM pr 34.0 13 0.00043 33.2 1.1 39 84-125 293-335 (355)
73 2ych_A Competence protein PILM 31.2 25 0.00086 30.6 2.6 44 73-116 291-343 (377)
74 1jce_A ROD shape-determining p 31.0 30 0.001 29.7 3.0 37 150-186 147-183 (344)
75 4gni_A Putative heat shock pro 30.2 55 0.0019 28.8 4.7 42 84-125 347-399 (409)
76 4gni_A Putative heat shock pro 29.9 31 0.0011 30.5 3.0 35 150-185 205-245 (409)
77 3cet_A Conserved archaeal prot 29.9 29 0.001 31.4 2.8 18 22-39 128-145 (334)
78 2dpn_A Glycerol kinase; thermu 29.1 53 0.0018 30.2 4.5 41 84-124 401-443 (495)
79 2w40_A Glycerol kinase, putati 28.2 59 0.002 29.9 4.7 42 83-124 409-452 (503)
80 2ko4_A Mediator of RNA polymer 28.1 7.9 0.00027 28.4 -1.1 30 193-222 34-64 (81)
81 2zf5_O Glycerol kinase; hypert 28.0 53 0.0018 30.2 4.3 41 84-124 396-438 (497)
82 1cza_N Hexokinase type I; stru 26.5 48 0.0016 33.6 4.0 23 18-40 523-545 (917)
83 3g25_A Glycerol kinase; IDP007 26.0 54 0.0018 30.2 4.0 41 84-124 407-449 (501)
84 4e1j_A Glycerol kinase; struct 25.8 61 0.0021 30.2 4.3 41 84-124 428-470 (520)
85 1dkg_D Molecular chaperone DNA 25.7 35 0.0012 29.7 2.5 19 22-40 3-21 (383)
86 3hm8_A Hexokinase-3; glucose, 25.5 55 0.0019 30.7 3.9 23 18-40 56-78 (445)
87 3qfu_A 78 kDa glucose-regulate 25.2 50 0.0017 28.6 3.4 41 84-124 346-390 (394)
88 3ezw_A Glycerol kinase; glycer 25.2 56 0.0019 30.3 4.0 41 84-124 405-447 (526)
89 2fxu_A Alpha-actin-1, actin, a 25.1 44 0.0015 29.3 3.1 21 18-38 2-22 (375)
90 3ezw_A Glycerol kinase; glycer 24.9 42 0.0014 31.3 3.0 20 23-42 6-25 (526)
91 3h3n_X Glycerol kinase; ATP-bi 24.9 57 0.002 30.1 3.9 41 84-124 406-448 (506)
92 1dkg_D Molecular chaperone DNA 24.4 49 0.0017 28.8 3.2 41 84-124 336-379 (383)
93 3ll3_A Gluconate kinase; xylul 24.4 61 0.0021 30.0 4.0 41 84-124 396-438 (504)
94 3hz6_A Xylulokinase; xylulose, 24.0 67 0.0023 29.8 4.2 41 84-124 405-448 (511)
95 2d4w_A Glycerol kinase; alpha 24.0 66 0.0023 29.6 4.2 41 84-124 406-448 (504)
96 2v7y_A Chaperone protein DNAK; 23.6 53 0.0018 30.3 3.4 19 22-40 3-21 (509)
97 3i8b_A Xylulose kinase; strain 23.2 69 0.0024 29.9 4.1 41 84-124 427-469 (515)
98 3ifr_A Carbohydrate kinase, FG 22.8 69 0.0024 29.7 4.0 41 84-124 403-445 (508)
99 3l0q_A Xylulose kinase; xlylul 22.5 66 0.0023 30.1 3.9 41 84-124 445-487 (554)
100 1v8d_A Hypothetical protein (T 22.4 31 0.0011 29.8 1.4 12 23-34 168-179 (235)
101 2p3r_A Glycerol kinase; glycer 21.7 72 0.0025 29.5 4.0 41 84-124 404-446 (510)
No 1
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=2.8e-63 Score=459.36 Aligned_cols=210 Identities=35% Similarity=0.657 Sum_probs=170.6
Q ss_pred CCCCeEEEEeCCceeEEEEEeecCCCC----Ccc----------------cCCCCCCC---------CCcCCceEEeEec
Q 027043 19 SQISHLALDIGGSLIKVVYFLRSNGSG----GSV----------------DDSGKKSD---------PVLEGRLHFAKFE 69 (229)
Q Consensus 19 ~~~~~igiDIGGSL~Kivy~~~~~~~~----~~~----------------~~~~~~~~---------~~~~g~l~F~~f~ 69 (229)
+++|||||||||||+|||||++.+... +.. -.++.|+. ..++|+|||++||
T Consensus 1 ~~~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~ 80 (360)
T 2i7n_A 1 PPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFP 80 (360)
T ss_dssp --CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEE
T ss_pred CCCCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEee
Confidence 468999999999999999999965211 000 02344442 2346999999999
Q ss_pred ccCHHHHHHHHHhc-------CceecCCchhhchHHHHHHhCCccceechhhhhhhhHHHHH---hhCCCccEEeeCCCe
Q 027043 70 TSKIIDCLEFIRSK-------NLHLAGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL---KAVHQEAFTYVDGQK 139 (229)
Q Consensus 70 t~~i~~~i~~i~~~-------~i~~TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl---~~~~~e~f~~~~~~~ 139 (229)
|++|++|++|++++ .+++|||||+||++.|++++++++.|+|||+|+++|++||+ .++|.|+|+|++...
T Consensus 81 t~~~~~~l~~~~~~~~~~~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~ 160 (360)
T 2i7n_A 81 SCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTN 160 (360)
T ss_dssp GGGHHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEEESTTC
T ss_pred hhhHHHHHHHHHHcCCCccCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEeccccc
Confidence 99999999999753 47889999999999999999999999999999999999999 578999999987532
Q ss_pred ----eeeecCCCCCccEEEEecCCceEEEEEeCCCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHhhCCCCCcCce
Q 027043 140 ----EFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDM 215 (229)
Q Consensus 140 ----~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~Gd~~~vDm 215 (229)
...+++..++||||||||||||||++|+++++|+|||||++||||||||++||||+.||||+++||++||+++|||
T Consensus 161 ~~~~~~~~~~~~~~~PyllVnIGsGvSiikv~~~~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~lA~~Gd~~~vDl 240 (360)
T 2i7n_A 161 PELCQKKPYCLDNPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDK 240 (360)
T ss_dssp TTTCEEEEECCSSCCSEEEEEESSSEEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHHHHHCCGGGTSE
T ss_pred cccccccccccccCCceEEEEeCCCcEEEEEcCCCCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHHHHcCCCCcccc
Confidence 2345566788999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred EeeeecCCCCCcCC
Q 027043 216 LVGDIYGGSEYSKV 229 (229)
Q Consensus 216 lV~DIYGg~dY~~i 229 (229)
+|+||||+ +|+++
T Consensus 241 lV~DIYg~-~y~~~ 253 (360)
T 2i7n_A 241 LVKDIYGG-DYERF 253 (360)
T ss_dssp EHHHHHSS-CBGGG
T ss_pred eeeecccC-ccccc
Confidence 99999997 99864
No 2
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=100.00 E-value=4.7e-42 Score=308.93 Aligned_cols=167 Identities=29% Similarity=0.492 Sum_probs=144.1
Q ss_pred CCCCCeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecccCHHHHHHHHHhc---CceecCCchhh
Q 027043 18 ESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSK---NLHLAGGGAYK 94 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~i~~i~~~---~i~~TGGGA~k 94 (229)
.....++|||||+|++|+||++ .++++|.+|++.+++++++|++.. .+++||+|+++
T Consensus 17 ~~~~~~iGIDiGsTt~K~V~~~--------------------~~~i~~~~~~~~~~~~~l~~l~~~~~~~i~~TG~G~~~ 76 (287)
T 2ews_A 17 RGSHMKVGIDAGGTLIKIVQEQ--------------------DNQRTFKTELTKNIDQVVEWLNQQQIEKLCLTGGNAGV 76 (287)
T ss_dssp ----CEEEEEECSSEEEEEEEC--------------------SSCEEEEEEEGGGHHHHHHHHHTSCCSEEEEESTTHHH
T ss_pred CCCCeEEEEEEChhhEEEEEEc--------------------CCEEEEEEechHHHHHHHHHhcccCceEEEEEChhHHh
Confidence 5668999999999999999974 246899999999999999999754 46789999999
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEE
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFER 174 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~R 174 (229)
+.+ .+++++.+++||+|+++|+.||....+ .+++||++||||+|+|+++|+ +++|+|
T Consensus 77 ~~~----~l~~~~~~v~Ei~~~~~Ga~~l~~~~~------------------~~~~~~~vIdIGg~dsii~v~-~~~f~r 133 (287)
T 2ews_A 77 IAE----NINIPAQIFVEFDAASQGLGILLKEQG------------------HDLADYIFANVGTGTSLHYFD-GQSQRR 133 (287)
T ss_dssp HHT----TSSSCCEECCHHHHHHHHHHHHHHHTT------------------CCCSCEEEEEESSSEEEEEEC-SSCEEE
T ss_pred HhH----hhCCCcceeehhHHHHHHHHHhcccCC------------------CCcCCeEEEEeCCCeEEEEEc-CCceEE
Confidence 976 578999999999999999999997654 468999999999999999999 579999
Q ss_pred eeccccCchhHHhhhhhhcCCCCHHHHHHHhhCCCCCcCceEeeeecCCCCCcC
Q 027043 175 ISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQGNNRVIDMLVGDIYGGSEYSK 228 (229)
Q Consensus 175 VgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~Gd~~~vDmlV~DIYGg~dY~~ 228 (229)
++||++||||||||+++|+++.||+|+.+||++||+++|||+|+|||++ +|..
T Consensus 134 ~~g~aaGgGtFl~l~a~ll~~~~~~el~~lA~~g~~~~vDl~v~DIy~~-~~~~ 186 (287)
T 2ews_A 134 VGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKD-TEPP 186 (287)
T ss_dssp EEEESCSHHHHHHHHHHHHCCCCHHHHHHHHTTCCCTTTCEETTTC--------
T ss_pred cCccccchhhHHHHHHHHhCCCCHHHHHHHHHcCCccccccchhhhcCC-CCCC
Confidence 9999999999999999999999999999999999999999999999996 6753
No 3
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.47 E-value=2.1e-06 Score=75.08 Aligned_cols=135 Identities=18% Similarity=0.314 Sum_probs=84.9
Q ss_pred CeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEe-Eecc-----cCHHHHHHHHHh--------cCcee
Q 027043 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFA-KFET-----SKIIDCLEFIRS--------KNLHL 87 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~-~f~t-----~~i~~~i~~i~~--------~~i~~ 87 (229)
..+|||+|+|.+|+|.++.. |++.+. ..++ ..+.++++-+.+ ..+.+
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~-------------------g~i~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~i~~ 64 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDG-------------------KEIVAKSLVAVGTGTSGPARSISEVLENAHMKKEDMAFTLA 64 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT-------------------TEEEEEEEEECCSSCCHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred EEEEEEeccceEEEEEEeCC-------------------CCEEEEEEecCCCCHHHHHHHHHHHHHHcCCChhHEEEEEE
Confidence 46999999999999998732 222211 1221 123444544432 12557
Q ss_pred cCCchhhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceE-EEEE
Q 027043 88 AGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVS-MIKV 166 (229)
Q Consensus 88 TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvS-i~kV 166 (229)
||.|...... + ....++|+.|..+|+.++.... -.++.||.+.+ ++.+
T Consensus 65 TG~g~~~~~~-----~--~~~~v~Ei~ah~~ga~~~~~~~------------------------~~vidiGGqd~k~i~~ 113 (270)
T 1hux_A 65 TGYGRNSLEG-----I--ADKQMSELSCHAMGASFIWPNV------------------------HTVIDIGGQDVKVIHV 113 (270)
T ss_dssp ESTTTTTTTT-----T--CSEEECHHHHHHHHHHHHCTTC------------------------CEEEEEETTEEEEEEE
T ss_pred eCccccchhh-----c--CCCCcccHHHHHHHHHHhCCCC------------------------CEEEEECCCceEEEEE
Confidence 9977543322 2 2345999999999998885311 15799999777 8888
Q ss_pred eCCCceE--Eeecccc-Cch-hHHhhhhhhcCCCCHHHHHHHhhCCC
Q 027043 167 DGDGKFE--RISGTSV-GGG-TFWGLGRLLTNCKSFDELLELSHQGN 209 (229)
Q Consensus 167 ~~~~~~~--RVgGssi-GGG-T~~GL~~LLtg~~~fdeil~lA~~Gd 209 (229)
.+ +... +.+.... |.| ++.-++++| |. +++|+.++|.++.
T Consensus 114 ~~-g~v~~~~mn~~ca~GtG~~le~~a~~l-g~-~~~el~~la~~~~ 157 (270)
T 1hux_A 114 EN-GTMTNFQMNDKCAAGTGRFLDVMANIL-EV-KVSDLAELGAKST 157 (270)
T ss_dssp ET-TEEEEEEEESSCCTTSHHHHHHHHHHH-TC-CTTTHHHHHTTCC
T ss_pred eC-CceeeeccccccchhhHHHHHHHHHHh-CC-CHHHHHHHHhhCC
Confidence 55 5432 3444322 333 677788877 54 6899999998765
No 4
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.25 E-value=3.6e-05 Score=66.29 Aligned_cols=137 Identities=20% Similarity=0.329 Sum_probs=84.7
Q ss_pred CeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEeccc----C-HHHHHHHHH-hc--------Ccee
Q 027043 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS----K-IIDCLEFIR-SK--------NLHL 87 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~----~-i~~~i~~i~-~~--------~i~~ 87 (229)
..+|||+|+|.+|+|.++. ++++.+..+.+. + ..++++-+. +. .+..
T Consensus 2 ~~lGID~GsT~tk~av~d~-------------------~~~il~~~~~~~g~~~e~a~~vl~~~~~~a~~~~~~~~~~a~ 62 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN-------------------GEDIVASETISSGTGTTGPSRVLEKLYGKTGLAREDIKKVVV 62 (276)
T ss_dssp EEEEEEECSSCEEEEEEET-------------------TTEEEEEEEESCCTTSSHHHHHHHHHHHHHCCCGGGEEEEEE
T ss_pred eEEEEEcCccEEEEEEEEC-------------------CCeEEEEEEecCCCCHHHHHHHHHHHHHHCCCcchhcccccc
Confidence 4689999999999999872 233333333222 1 123333222 21 2345
Q ss_pred cCCchhhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEe
Q 027043 88 AGGGAYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVD 167 (229)
Q Consensus 88 TGGGA~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~ 167 (229)
||++..- +..++..++|++|...|..++.. ..+| +++-.|+++.++.+.
T Consensus 63 t~~~~~a--------~~~~~~~Vne~~aha~a~~~~~~----------------------~~~~-vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 63 TGYGRMN--------YSDADKQISELSCHARGVNFIIP----------------------ETRT-IIDIGGQDAKVLKLD 111 (276)
T ss_dssp ESTTGGG--------CCSCSEECCHHHHHHHHHHHHST----------------------TCCE-EEEECSSCEEEEEEC
T ss_pred CchHHHH--------hhCCCcccchHHHHHHHHHHhCC----------------------CCCe-EEEEcCCCceEEEEE
Confidence 8777542 34567789999999999887632 2233 556667777777777
Q ss_pred CCCceE--Eeecc-ccCchhHH-hhhhhhcCCCCHHHHHHHhhCCCC
Q 027043 168 GDGKFE--RISGT-SVGGGTFW-GLGRLLTNCKSFDELLELSHQGNN 210 (229)
Q Consensus 168 ~~~~~~--RVgGs-siGGGT~~-GL~~LLtg~~~fdeil~lA~~Gd~ 210 (229)
.++.++ +.||+ ..|+|-|. =++++| + .+|++.-+++.+++.
T Consensus 112 ~~g~~~~~~~~~~~~~g~G~f~d~~a~~l-~-~~~~~~~~~~~~a~~ 156 (276)
T 4ehu_A 112 NNGRLLNFLMNDKCAAGTGRFLDVMAKII-E-VDVSELGSISMNSQN 156 (276)
T ss_dssp TTSCEEEEEEECSCSTTSHHHHHHHHHHH-T-CCGGGHHHHHTTCSS
T ss_pred ecCceEEEEeCCCcCcchhhHHHHHHHHh-c-cChhhhHHHHhcCCC
Confidence 666666 44554 56777676 455555 3 467777777777653
No 5
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.54 E-value=0.13 Score=44.01 Aligned_cols=107 Identities=18% Similarity=0.329 Sum_probs=66.9
Q ss_pred CCeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecc-cCHHHHHHHHHh----cCc-----eecC-
Q 027043 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFET-SKIIDCLEFIRS----KNL-----HLAG- 89 (229)
Q Consensus 21 ~~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t-~~i~~~i~~i~~----~~i-----~~TG- 89 (229)
+..+|||||||.+|++-++.. +..+...++++ ...+++++.+.+ ..+ .+.|
T Consensus 4 m~~lgidiggt~i~~~l~d~~------------------g~il~~~~~~~~~~~~~~~~~i~~~i~~~~i~gigi~~pG~ 65 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPD------------------GKILDKTSISTPENLEDLLAWLDQRLSEQDYSGIAMSVPGA 65 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTT------------------CCEEEEEEECCCSSHHHHHHHHHHHHTTSCCSEEEEEESSE
T ss_pred cEEEEEEECCCEEEEEEECCC------------------CCEEEEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEEEecCc
Confidence 457999999999999997621 11233445555 455666554442 111 1111
Q ss_pred ----Cc------------hhhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEE
Q 027043 90 ----GG------------AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYL 153 (229)
Q Consensus 90 ----GG------------A~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyL 153 (229)
.| -+.+.+.| +.+++++.-.+...|...|-.+ .. ....+++
T Consensus 66 vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~-~~---------------------~~~~~~v 122 (292)
T 2gup_A 66 VNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL-AH---------------------PELENAA 122 (292)
T ss_dssp ECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH-HC---------------------TTCSSEE
T ss_pred ccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH-hc---------------------CCCCeEE
Confidence 01 12345667 7889999999999998887655 11 1234689
Q ss_pred EEecCCceEEEEEeC
Q 027043 154 LVNIGSGVSMIKVDG 168 (229)
Q Consensus 154 lVNIGSGvSi~kV~~ 168 (229)
+|.+|||+-.=-+-+
T Consensus 123 ~l~~GtGiG~giv~~ 137 (292)
T 2gup_A 123 CVVIGTGIGGAMIIN 137 (292)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCceEEEEEEC
Confidence 999999987554433
No 6
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.53 E-value=0.051 Score=47.71 Aligned_cols=55 Identities=13% Similarity=0.224 Sum_probs=41.0
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
...+.|++.+++++.-.+...|...|-.++-. .....++++|.+|||+..=.+-+
T Consensus 87 ~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~--------------------~~~~~~~~~l~~GtGiG~gii~~ 141 (321)
T 3vgl_A 87 PLKDKVEQRVGLPVVVENDANAAAWGEYRFGA--------------------GQGHDDVICITLGTGLGGGIIIG 141 (321)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHhhhhCCCEEEEehhhhHHHHHHHhCC--------------------CCCCCCEEEEEeCcceEEEEEEC
Confidence 34678888999999999999999888766521 02345689999999987655544
No 7
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.20 E-value=0.26 Score=43.06 Aligned_cols=58 Identities=9% Similarity=0.075 Sum_probs=43.0
Q ss_pred hchHHHHHHhC---CccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCC
Q 027043 94 KFADLIKEKLG---VVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDG 170 (229)
Q Consensus 94 k~~~~~~~~lg---~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~ 170 (229)
...+.+++.++ +++.-.+...|...| .+ . .++++|.+|||+--..++.++
T Consensus 89 ~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~------------------------~~~v~v~~GTGig~~~v~~~G 141 (347)
T 2ch5_A 89 ILIEELRDRFPYLSESYLITTDAAGSIAT-AT--P------------------------DGGVVLISGTGSNCRLINPDG 141 (347)
T ss_dssp HHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--S------------------------SCEEEEEESSSEEEEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--C------------------------CCcEEEEEcCCceeEEEcCCC
Confidence 55567788886 888889999998877 21 1 136888899999877777667
Q ss_pred ceEEeecc
Q 027043 171 KFERISGT 178 (229)
Q Consensus 171 ~~~RVgGs 178 (229)
..-|.||.
T Consensus 142 ~~c~cG~~ 149 (347)
T 2ch5_A 142 SESGCGGW 149 (347)
T ss_dssp CEEEEECC
T ss_pred CEEecCCc
Confidence 77788864
No 8
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=95.95 E-value=0.33 Score=41.30 Aligned_cols=108 Identities=12% Similarity=0.126 Sum_probs=67.1
Q ss_pred CeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecccC---HHHHHHHHHh----c-------Ccee
Q 027043 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSK---IIDCLEFIRS----K-------NLHL 87 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~---i~~~i~~i~~----~-------~i~~ 87 (229)
..+|||||||.+|++-++.. +..+...++++.. .+++++.+.+ . .+.+
T Consensus 2 ~~lgidiggt~~~~~l~d~~------------------g~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGAD------------------GQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECTT------------------CCEEEEEEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCC------------------CCEEEEEEecCCCCCCHHHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 35899999999999997621 1123344455432 5566554442 1 1112
Q ss_pred cC-----Cc----h--------hhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCc
Q 027043 88 AG-----GG----A--------YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLY 150 (229)
Q Consensus 88 TG-----GG----A--------~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~y 150 (229)
.| .| + +.+.+.|++.+++++.-.+...|...|-.++-. ....
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~g~--------------------~~~~- 122 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD--------------------GDIT- 122 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHTSC--------------------TTCC-
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHhCC--------------------CCCc-
Confidence 11 11 1 123567888899999999999998877654421 1234
Q ss_pred cEEEEecCCceEEEEEeC
Q 027043 151 PYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 151 PyLlVNIGSGvSi~kV~~ 168 (229)
++++|.+|||+..=.+.+
T Consensus 123 ~~v~l~~GtGiG~gii~~ 140 (289)
T 2aa4_A 123 DMVFITVSTGVGGGVVSG 140 (289)
T ss_dssp CEEEEEESSSEEEEEEET
T ss_pred eEEEEEeCccEEEEEEEC
Confidence 799999999987655543
No 9
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.89 E-value=0.086 Score=45.58 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=23.5
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeeccccCc
Q 027043 150 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVGG 182 (229)
Q Consensus 150 yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGG 182 (229)
.|.|+|..||.|.+=.| .++ +++||.-+=|
T Consensus 122 ~~~iVvD~GTA~T~d~v-~~g--~~lGG~I~PG 151 (249)
T 3bex_A 122 KNGIIIDMGTATTVDLV-VNG--SYEGGAILPG 151 (249)
T ss_dssp SCEEEEEESSEEEEEEE-ETT--EEEEEEEEEC
T ss_pred CCEEEEEcCCceEEEEE-eCC--eEeeEEECcc
Confidence 58999999999999999 644 5677765433
No 10
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.84 E-value=0.19 Score=44.67 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=66.0
Q ss_pred cCCchh-------hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCc
Q 027043 88 AGGGAY-------KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSG 160 (229)
Q Consensus 88 TGGGA~-------k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSG 160 (229)
+|=|.+ .+.+-+...+++|+..+++++|...+..+ .. ..+|.+|+-.|-.
T Consensus 76 ~GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~-~~----------------------~~~~~~l~v~GG~ 132 (330)
T 2ivn_A 76 QGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM-FG----------------------VKDPVGLYVSGGN 132 (330)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG-GT----------------------CCSCEEEEECSSC
T ss_pred CCCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh-cC----------------------CCCCeEEEEcCCC
Confidence 566654 45666666788999999999999998766 31 1245677777768
Q ss_pred eEEEEEeCCCceEEeeccc-cCc-hhHHhhhhhhcCCC--CHHHHHHHhhCCCC
Q 027043 161 VSMIKVDGDGKFERISGTS-VGG-GTFWGLGRLLTNCK--SFDELLELSHQGNN 210 (229)
Q Consensus 161 vSi~kV~~~~~~~RVgGss-iGG-GT~~GL~~LLtg~~--~fdeil~lA~~Gd~ 210 (229)
+.++.++ .++|+.+|+|. .+= -.|--.+++| |.. .--++.+||..|+.
T Consensus 133 t~~i~~~-~~~~~~lg~t~dds~Gr~fD~vA~~L-Gl~~~~~~~le~lA~~g~~ 184 (330)
T 2ivn_A 133 TQVLALE-GGRYRVFGETLDIGIGNAIDVFAREL-GLGFPGGPKVEKLAEKGEK 184 (330)
T ss_dssp EEEEEEE-TTEEEEEEEBSSSCHHHHHHHHHHHH-TCCSCHHHHHHHHHHTCCS
T ss_pred ceEEEEc-CCeEEEEEeecCchhHHHHHHHHHHh-CCCCCcHHHHHHHhhcCCC
Confidence 8889897 68999998764 122 2333334444 332 22477888998874
No 11
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=95.72 E-value=0.12 Score=45.42 Aligned_cols=109 Identities=14% Similarity=0.220 Sum_probs=70.2
Q ss_pred CCeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecccCHHHHHH----HHHhcCc-----ee----
Q 027043 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLE----FIRSKNL-----HL---- 87 (229)
Q Consensus 21 ~~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~i~----~i~~~~i-----~~---- 87 (229)
...+|||||||.+|++-++.. +..+.-.++++..-+++++ ++++..+ .+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~------------------G~il~~~~~~t~~~~~~l~~i~~~~~~~~i~gigi~~pG~v 64 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRED------------------GTIIDRIEFPTXMPDETIEXVIQYFSQFSLQAIGIGSFGPV 64 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTT------------------SCEEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSE
T ss_pred cEEEEEEECcceeEEEEEECC------------------CcEEEEEEecCCChHHHHHHHHHHhccCCceEEEEEeceee
Confidence 356899999999999997621 1234455677766555544 4433222 11
Q ss_pred ---cC----Cc---h-------hhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCc
Q 027043 88 ---AG----GG---A-------YKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLY 150 (229)
Q Consensus 88 ---TG----GG---A-------~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~y 150 (229)
+| |- + +.+.+.|++.+++|+.-.+...|...|=.++-. . ....
T Consensus 65 d~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~-~-------------------~~~~ 124 (302)
T 3epq_A 65 DNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGE-A-------------------XGLD 124 (302)
T ss_dssp ECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST-T-------------------TTCS
T ss_pred ccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCC-C-------------------CCCC
Confidence 21 21 1 234678889999999999999999888766521 0 1234
Q ss_pred cEEEEecCCceEEEEEe
Q 027043 151 PYLLVNIGSGVSMIKVD 167 (229)
Q Consensus 151 PyLlVNIGSGvSi~kV~ 167 (229)
.++.|.+|||+--=-+-
T Consensus 125 ~~~~l~~GtGiG~gii~ 141 (302)
T 3epq_A 125 SCLYITIGTGIGAGAIV 141 (302)
T ss_dssp CEEEEEESSSEEEEEEE
T ss_pred cEEEEEECCceEEEEEE
Confidence 58999999988644443
No 12
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=95.61 E-value=0.42 Score=43.29 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=15.8
Q ss_pred eEEEEeCCceeEEEEEe
Q 027043 23 HLALDIGGSLIKVVYFL 39 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~ 39 (229)
.+|||||||.+|++.++
T Consensus 4 vlgidiGgt~ik~al~d 20 (381)
T 1saz_A 4 ILTINPGSTSTKLSIFE 20 (381)
T ss_dssp EEEEEECSSEEEEEEEE
T ss_pred EEEEECCccceeEEEEe
Confidence 58999999999999987
No 13
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.59 E-value=0.23 Score=43.22 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=38.8
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
..+.|++.+++|+.-.+...|...|-.++-. . .....+++|.+|||+-.=-+-+
T Consensus 90 l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~-~-------------------~~~~~~~~l~~GtGiG~gii~~ 143 (302)
T 3vov_A 90 IRRILEEATGRPVFLENDANAAALAEHHLGA-A-------------------QGEESSLYLTVSTGIGGGVVLG 143 (302)
T ss_dssp HHHHHHHHHSSCEEEEEHHHHHHHHHHHHST-T-------------------TTCSCEEEEEESSSEEEEEEET
T ss_pred hHHHHHHhhCCCEEEEechHHHHHHHHHhCC-C-------------------CCCCCEEEEEECCceeEEEEEC
Confidence 4567888899999999999999888766521 0 1234589999999876444433
No 14
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=95.19 E-value=0.65 Score=42.32 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=39.8
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.++-. .....++++|.+|+|+..=-+-+
T Consensus 199 ~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~--------------------~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 199 ALGPEIYKATGLPVFVANDTRAWALAEKLFGH--------------------SQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHhCCCEEEechhHHHHHHHHHhCC--------------------CCCCCcEEEEEECCcEEEEEEEC
Confidence 44577888899999999999998888765421 01234689999999987544433
No 15
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=95.00 E-value=0.16 Score=43.68 Aligned_cols=94 Identities=16% Similarity=0.142 Sum_probs=56.8
Q ss_pred eEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEeccc-----CHHHHHHHHH----h---c-----Cc
Q 027043 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS-----KIIDCLEFIR----S---K-----NL 85 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~-----~i~~~i~~i~----~---~-----~i 85 (229)
.+|||+|||.+|++.++.. +..+...++++. ..+++++.+. + . .|
T Consensus 4 ~lgiDiGgt~~~~~l~d~~------------------g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~igi 65 (299)
T 2e2o_A 4 IVGVDAGGTKTKAVAYDCE------------------GNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGM 65 (299)
T ss_dssp EEEEEECSSCEEEEEECTT------------------SCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEEEeCCCcEEEEEEcCC------------------CCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 5899999999999998621 112334456654 2344443332 2 1 12
Q ss_pred eecCCc----hhhchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCce
Q 027043 86 HLAGGG----AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGV 161 (229)
Q Consensus 86 ~~TGGG----A~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGv 161 (229)
.+.|=. .....+.+++ +++++.-.+...|...|-.. ..+++++.+|||+
T Consensus 66 ~~~G~~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~~--------------------------~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 66 GVAGLDSKFDWENFTPLASL-IAPKVIIQHDGVIALFAETL--------------------------GEPGVVVIAGTGS 118 (299)
T ss_dssp EETTCCSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHHT--------------------------TSCEEEEEESSSE
T ss_pred EcCCCCchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhccC--------------------------CCCeEEEEecCCE
Confidence 234431 1345566666 77787778888877666331 1358999999994
No 16
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.99 E-value=0.86 Score=39.58 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=36.7
Q ss_pred hHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 96 ADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 96 ~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.|++.+++++.-.+...|...|-.++-. .....++++|.+|||+-.=.+-+
T Consensus 113 ~~~l~~~~~~pv~v~NDa~aaalgE~~~g~--------------------~~~~~~~v~l~~GtGiG~giv~~ 165 (327)
T 2ap1_A 113 RADLSARLDRDVRLDNDANCFALSEAWDDE--------------------FTQYPLVMGLILGTGVGGGLVLN 165 (327)
T ss_dssp HHHHHHHHTSCEEEEEHHHHHHHHHHTSTT--------------------GGGCSEEEEEEESSSEEEEEEET
T ss_pred HHHHHHHHCCCEEEecHHHHHHHHHHHhCc--------------------CCCCCcEEEEEECCcEEEEEEEC
Confidence 467888899999999999998777543311 01234588999999986544433
No 17
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.94 E-value=0.29 Score=42.38 Aligned_cols=54 Identities=20% Similarity=0.433 Sum_probs=39.1
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
+.+.+++.+++++.-.+...|...|-.++-. ......+++|.+|||+-.=-+-+
T Consensus 89 l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~--------------------~~~~~~~~~l~~GtGiG~giv~~ 142 (297)
T 4htl_A 89 LKEWLEAETGLPVAIENDANCALLAEKWLGK--------------------GQDLDDFLCLTIGTGIGGGIFSN 142 (297)
T ss_dssp HHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred HHHHHHHHHCcCEEEecHHHHHHHHHHHhCC--------------------CCCCCcEEEEEECcceEEEEEEC
Confidence 4567888899999999999999988766521 01234589999999886544433
No 18
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.85 E-value=0.51 Score=41.21 Aligned_cols=55 Identities=13% Similarity=0.425 Sum_probs=40.7
Q ss_pred hchHHHHHHh-CCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKL-GVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~l-g~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+ ++++.-.+...|...|-.++-. .....++++|.+|||+..=-+.+
T Consensus 108 ~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~--------------------~~~~~~~v~l~~GtGiG~gii~~ 163 (321)
T 3r8e_A 108 PIVEILRSEFPHIHFKIENDAKCAALGEYYFGE--------------------NKRMQTFILLALGTGVGSGVMMN 163 (321)
T ss_dssp CHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCC--------------------CCCCCcEEEEEECCceEEEEEEC
Confidence 4456788889 9999999999999888766521 02345689999999987655544
No 19
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=94.50 E-value=0.83 Score=39.93 Aligned_cols=31 Identities=10% Similarity=0.356 Sum_probs=25.0
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeeccccCc
Q 027043 150 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVGG 182 (229)
Q Consensus 150 yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGG 182 (229)
.|.|+|..||-|.+=.|+.++ +++||...=|
T Consensus 125 ~~~iVVD~GTA~T~d~v~~~g--~~lGG~I~PG 155 (266)
T 3djc_A 125 QNIIVIDFGTATTFCAISHKK--AYLGGAILPG 155 (266)
T ss_dssp SEEEEEEESSEEEEEEECTTS--EEEEEEEEEC
T ss_pred CCEEEEECCCeeEEEEEcCCC--cEEEEEECcc
Confidence 589999999999999998865 5677765544
No 20
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=94.44 E-value=0.22 Score=43.78 Aligned_cols=120 Identities=14% Similarity=0.245 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEeccc---CHHHHH-HHHHhcC--c----
Q 027043 16 ESESQISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS---KIIDCL-EFIRSKN--L---- 85 (229)
Q Consensus 16 ~~~~~~~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~---~i~~~i-~~i~~~~--i---- 85 (229)
++-+....+|||||||.+|++.++..+. ..+...++++. .+.+.+ +++++.. +
T Consensus 9 ~~~~~~~~lgiDiGGT~i~~~l~dl~~g-----------------~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~gig 71 (332)
T 1sz2_A 9 HHGSTKYALVGDVGGTNARLALCDIASG-----------------EISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGC 71 (332)
T ss_dssp -----CEEEEEEEETTEEEEEEEETTTC-----------------CEEEEEEEEGGGCSCHHHHHHHHHHHSCCCCCEEE
T ss_pred ccCCCCEEEEEEechhheEEEEEECCCC-----------------cEEEEEEecCCCcCCHHHHHHHHHHhcCCCccEEE
Confidence 3355666789999999999999862111 11233455553 444444 4554321 1
Q ss_pred -eecC----Cc--------hhhchHHHHHHhCCc-cceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCcc
Q 027043 86 -HLAG----GG--------AYKFADLIKEKLGVV-LDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYP 151 (229)
Q Consensus 86 -~~TG----GG--------A~k~~~~~~~~lg~~-~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yP 151 (229)
.+.| |- .+. .+.+++.++++ +.-.+...|...|-.++-. +...+|-... .....+
T Consensus 72 i~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~---~~~~~~g~g~-------~~~~~~ 140 (332)
T 1sz2_A 72 IAIACPITGDWVAMTNHTWAFS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKK---EHLIQFGGAE-------PVEGKP 140 (332)
T ss_dssp EEESSCCCSSEECCSSSCCCEE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCG---GGEEECSSCC-------CCTTCC
T ss_pred EEEeCceeCCEEeeeCCCCcCC-HHHHHHHhCCCcEEEEeCHhHHhccccccCh---hhheecCCCC-------CCCCCc
Confidence 1111 10 022 35678889998 8889999998877654310 1111111110 023456
Q ss_pred EEEEecCCceEE
Q 027043 152 YLLVNIGSGVSM 163 (229)
Q Consensus 152 yLlVNIGSGvSi 163 (229)
+++|.+|||+--
T Consensus 141 ~~~v~~GTGiG~ 152 (332)
T 1sz2_A 141 IAVYGAGTGLGV 152 (332)
T ss_dssp EEEEEESSSEEE
T ss_pred EEEEEcCccceE
Confidence 899999999875
No 21
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.41 E-value=0.72 Score=39.71 Aligned_cols=55 Identities=15% Similarity=0.271 Sum_probs=39.8
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.+.-. .....++++|.+|||+..-.+.+
T Consensus 99 ~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~--------------------~~~~~~~~~l~~GtGiG~giv~~ 153 (326)
T 2qm1_A 99 PVKEQIESALGIPFALDNDANVAALGERWKGA--------------------GENNPDVIFITLGTGVGGGIVAA 153 (326)
T ss_dssp CHHHHHHHHHCSCEEEEEHHHHHHHHHHHHST--------------------TTTCSCEEEEEESSSEEEEEEET
T ss_pred hHHHHHHHHhCCCEEEecHHHHHHHHHHHhCC--------------------CCCCCcEEEEEECCceEEEEEEC
Confidence 34677888899999999999998877655421 01235689999999988655544
No 22
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=94.40 E-value=0.35 Score=42.52 Aligned_cols=55 Identities=13% Similarity=0.210 Sum_probs=38.7
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.++-. ......+++|.+|||+-.=-+-+
T Consensus 111 ~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~--------------------~~~~~~~~~l~~GtGiG~gii~~ 165 (327)
T 4db3_A 111 PLRADLEAKIGRSVKIENDANCFALSEAWDEE--------------------LQDAPSVMGLILGTGFGGGLIYE 165 (327)
T ss_dssp CHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTT--------------------TTTCSEEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHHCCCEEEecchhHHHHHHHHhCC--------------------CCCCCcEEEEEeCccceEEEEEC
Confidence 34677888899999999999998887654321 01234588899999886544443
No 23
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=93.96 E-value=0.88 Score=39.13 Aligned_cols=109 Identities=13% Similarity=-0.016 Sum_probs=62.1
Q ss_pred eEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEeccc-----CHHHHHHHHHh----------cC---
Q 027043 23 HLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETS-----KIIDCLEFIRS----------KN--- 84 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~-----~i~~~i~~i~~----------~~--- 84 (229)
.+|||+|||.+|.+-++ ... .+...+.++. ..+++++-+.+ ..
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~------------------il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~i~~ 62 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK------------------SLGRFQTSGINPFQQDRNEIDTALRSEVLPAIGQKASSIRA 62 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE------------------EEEEEEEECCCTTTSCHHHHHHHHTTTTHHHHTTSTTTCCE
T ss_pred EEEEEeCccceEEEEEe-CCe------------------EEEEEECCCCCcccCCHHHHHHHHHHHHHHHhCCCcccccE
Confidence 58999999999999876 321 1222233221 33444433321 01
Q ss_pred --ceecCCch---hhchHHHHHHhC--CccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEec
Q 027043 85 --LHLAGGGA---YKFADLIKEKLG--VVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNI 157 (229)
Q Consensus 85 --i~~TGGGA---~k~~~~~~~~lg--~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNI 157 (229)
+.++|-.. ..+.+.+++.++ .++.-.+...|...|.. ...+.+++.+
T Consensus 63 igig~pG~~~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~--------------------------g~~~~v~v~~ 116 (291)
T 1zbs_A 63 VYFYGAGCTPAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC--------------------------GDSEGIACIL 116 (291)
T ss_dssp EEEEETTCCTTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT--------------------------TTSCEEEEEE
T ss_pred EEEECCCCChHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc--------------------------CCCCcEEEEe
Confidence 22355331 135667777777 37777777777555520 1134788999
Q ss_pred CCce-EEEEEeCCCceEEeec
Q 027043 158 GSGV-SMIKVDGDGKFERISG 177 (229)
Q Consensus 158 GSGv-Si~kV~~~~~~~RVgG 177 (229)
|||+ ....+. +++..|.||
T Consensus 117 GTGigg~~i~~-~G~~~~aGe 136 (291)
T 1zbs_A 117 GTGSNSCLFDG-REIKANVSP 136 (291)
T ss_dssp SSSEEEEEECS-SSEEEECCC
T ss_pred cCChheEEECC-CCcEEEeCC
Confidence 9999 444432 356777663
No 24
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=93.62 E-value=1.5 Score=39.73 Aligned_cols=105 Identities=13% Similarity=0.166 Sum_probs=57.2
Q ss_pred hHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeec-CCCCCccEEEEecCCceEEEEEeCCCc---
Q 027043 96 ADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQI-DQNDLYPYLLVNIGSGVSMIKVDGDGK--- 171 (229)
Q Consensus 96 ~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~-~~~~~yPyLlVNIGSGvSi~kV~~~~~--- 171 (229)
.+.|++.+++++.-.+...|...|-.++-+ .|.. +++.... ......++++|.+|||+--=-|-+ ++
T Consensus 101 ~~~L~~~~g~PV~veNDanaaAlgE~~~G~-~p~~-------~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~-G~l~~ 171 (366)
T 3mcp_A 101 GPFLEDIFGIPVFINNDGSLFAYGEALTGV-LPEI-------NRRLREAGSTKRYKNLLGVTLGTGFGAGVVID-GELLR 171 (366)
T ss_dssp HHHHHHHHCSCEEEECHHHHHHHHHHHTSH-HHHH-------HHHHHHTTCCCCCCEEEEEEESSSEEEEEEET-TEECC
T ss_pred HHHHHHHHCCCEEEechhhHHHHHHHHhCC-Cccc-------ccccccccccCCCCcEEEEEECCcceEEEEEC-CEEec
Confidence 457888899999999999998888665420 0000 0000000 012345689999999885443333 22
Q ss_pred --------eEEee---c------cccCchhHHhhhhhhcC---CCCHHHHHHHhh---CCC
Q 027043 172 --------FERIS---G------TSVGGGTFWGLGRLLTN---CKSFDELLELSH---QGN 209 (229)
Q Consensus 172 --------~~RVg---G------ssiGGGT~~GL~~LLtg---~~~fdeil~lA~---~Gd 209 (229)
+-|+- | +.+++-.+.-..+.+.+ ..+.+++.++|+ +||
T Consensus 172 G~~g~AGEiGH~~~~CG~~GclE~~~S~~al~~~~~~~~~~~~~~~~~~i~~~a~~~~~gD 232 (366)
T 3mcp_A 172 GDNAAGGYVWCLRNKKYPEYIVEESVSIRAVMRVYAERSGDAGARTPKEIFEIAEGIRPGN 232 (366)
T ss_dssp CTTSCTTCCTTSBCSSCTTSBGGGTSSHHHHHHHHHHHSSCCSCCCHHHHHHHHHTSSCSC
T ss_pred CCCCCCceeecccCCCCCCcceeeeecHHHHHHHHHHhhCCCCCCCHHHHHHHHhhhhcCC
Confidence 11221 0 11122222222222332 368999999999 998
No 25
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=92.61 E-value=2.1 Score=37.35 Aligned_cols=31 Identities=16% Similarity=0.453 Sum_probs=25.2
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeeccccCc
Q 027043 150 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVGG 182 (229)
Q Consensus 150 yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGG 182 (229)
.|.|+|..||-|.+=.|+.++ +++||..+=|
T Consensus 123 ~~~iVVD~GTAtT~d~v~~~g--~~lGG~I~PG 153 (268)
T 2h3g_X 123 SPLIIVDFGTATTYCYINEEK--HYMGGVITPG 153 (268)
T ss_dssp SSEEEEEESSEEEEEEECTTS--EEEEEEEEEC
T ss_pred CCEEEEECCCceEEEEECCCC--cEEEEEECcc
Confidence 589999999999999998865 5677765543
No 26
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=92.49 E-value=1 Score=39.40 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=33.8
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEE
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKV 166 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV 166 (229)
+.+.|++.+++++.-.+...|...+-.+. . . .....++.|.+|||+--=-|
T Consensus 99 l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~--~------------------~~~~~~~~v~~GtGiG~gii 149 (310)
T 3htv_A 99 LADKLENTLNCPVEFSRDVNLQLSWDVVE-N--R------------------LTQQLVLAAYLGTGMGFAVW 149 (310)
T ss_dssp HHHHHHHHHTSCEEEEEHHHHHHHHHHHH-T--T------------------CTTSCEEEEEESSSEEEEEE
T ss_pred HHHHHHHHhCCCEEEeeHHHHHHHHHHhh-c--c------------------cCCceEEEEEeceeEEEEEE
Confidence 45678888999999999999876443211 1 0 11234788999998864333
No 27
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=92.49 E-value=2.3 Score=37.19 Aligned_cols=55 Identities=9% Similarity=0.182 Sum_probs=39.1
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.++-. .....++++|.+|||+..=.+-+
T Consensus 122 ~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~--------------------~~~~~~~v~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 122 DLRTPLSDTLHLPVWVDNDGNCAALAERKFGQ--------------------GKGLENFVTLITGTGIGGGIIHQ 176 (343)
T ss_dssp ECHHHHHHHHCSCEEEEEHHHHHHHHHHHTST--------------------TTTCSCEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHHCCCEEEechhHHHHHHHHHhCC--------------------CCCCCcEEEEEECCCEEEEEEEC
Confidence 44678888899999999999998887654321 01234689999999987554433
No 28
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=92.29 E-value=1.8 Score=38.70 Aligned_cols=53 Identities=25% Similarity=0.378 Sum_probs=38.7
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.++-. .. .++++|.+|+|+..=-+-+
T Consensus 179 ~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~---------------------~~-~~~v~l~~GtGiG~giv~~ 231 (380)
T 2hoe_A 179 PLANLLKEKYGIEVWVENDADMGAVGEKWYTK---------------------RD-DSFAWILTGKGIGAGIIID 231 (380)
T ss_dssp CHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTT---------------------CC-SCEEEEEESSSCEEEEEET
T ss_pred ChHHHHHHHhCCCEEEechHHHHHHHHHHhCC---------------------CC-CcEEEEEeCCceEEEEEEC
Confidence 34577888899999999999998888665421 11 4589999999877554433
No 29
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=91.11 E-value=3.8 Score=36.71 Aligned_cols=55 Identities=9% Similarity=0.138 Sum_probs=39.5
Q ss_pred hchHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeC
Q 027043 94 KFADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 94 k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~ 168 (229)
.+.+.|++.+++++.-.+...|...|-.++-. .....++++|.+|+|+..=-+.+
T Consensus 177 ~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~--------------------~~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 177 PLGEALEQHTGVPVYIQHDISAWTMAEALFGA--------------------SRGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp CHHHHHHHHHSSCEEEEEHHHHHHHHHHHHST--------------------TTTCSSEEEEEESSSEEEEEEET
T ss_pred CHHHHHHHHHCCCEEEechhHHHHHHHHHhcC--------------------CCCCCcEEEEEECCcEEEEEEEC
Confidence 34567888899999999999998888765421 01234589999999987655533
No 30
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=90.66 E-value=6.8 Score=32.92 Aligned_cols=54 Identities=13% Similarity=0.196 Sum_probs=38.5
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCc-cEEEEecCCceEEEEEeC
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLY-PYLLVNIGSGVSMIKVDG 168 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~y-PyLlVNIGSGvSi~kV~~ 168 (229)
+.+.|++.+++|+.-.+...|...|-.++-. . .... .++++.+|||+-.=-+-+
T Consensus 106 l~~~l~~~~~~pV~v~NDanaaalaE~~~g~-~-------------------~~~~~~~~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 106 IDALLTARLGRPVEVINDADAAGLAEARYGA-G-------------------AGVKGTVLVITLGTGIGSAFIFD 160 (267)
T ss_dssp HHHHHHHHHTSCEEEEEHHHHHHHHHHHHST-T-------------------TTCCSEEEEEEESSSEEEEEEET
T ss_pred HHHHHHHHHCCCEEEeehhHHHHHHHHHhCC-C-------------------CCCCCcEEEEEECcceEEEEEEC
Confidence 3467888899999999999999888665421 0 1122 367889999988665654
No 31
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=89.70 E-value=6.7 Score=33.60 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=15.9
Q ss_pred eEEEEeCCceeEEEEEe
Q 027043 23 HLALDIGGSLIKVVYFL 39 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~ 39 (229)
.+|||+|||.+|++-++
T Consensus 13 ~lGiDiGgT~i~~~l~d 29 (305)
T 1zc6_A 13 LIGVDGGGTGTRIRLHA 29 (305)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEcCccceEEEEEc
Confidence 58999999999999987
No 32
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=89.17 E-value=1.4 Score=37.77 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=35.5
Q ss_pred hchHHHHHHhC--CccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCce-EEEEEeCCC
Q 027043 94 KFADLIKEKLG--VVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGV-SMIKVDGDG 170 (229)
Q Consensus 94 k~~~~~~~~lg--~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGv-Si~kV~~~~ 170 (229)
.+.+.+++.++ .++.-.+...|...|-. ...+.++|.+|||+ ..-.+. ++
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~--------------------------g~~~~v~v~~GTGi~g~gi~~-~G 127 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLC--------------------------GQKAGIACILGTGSNSCFYNG-KE 127 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTT--------------------------TTSCBEEEEESSSEEEEEECS-SS
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhc--------------------------CCCCcEEEEeCCChheEEECC-CC
Confidence 35566777777 47777777776444321 12346889999999 444443 35
Q ss_pred ceEEeec
Q 027043 171 KFERISG 177 (229)
Q Consensus 171 ~~~RVgG 177 (229)
+..|.||
T Consensus 128 ~~~~aGe 134 (291)
T 1zxo_A 128 IVSNISP 134 (291)
T ss_dssp EEEECCC
T ss_pred cEEEeCC
Confidence 6777664
No 33
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=88.81 E-value=2.6 Score=37.45 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=23.1
Q ss_pred hchHHHHHHhCC-ccceechhhhhhhhHHHHH
Q 027043 94 KFADLIKEKLGV-VLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 94 k~~~~~~~~lg~-~~~k~dEm~~li~G~~fLl 124 (229)
...+++++.+++ ++.-.+.+.|...|...|-
T Consensus 118 ~l~~~l~~~~~~~pv~v~NDa~aaalge~~l~ 149 (373)
T 2q2r_A 118 RLSDYPKALFPPGHSAILNDLEAGGFGVLAVS 149 (373)
T ss_dssp EGGGSCTTTSCTTSEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCEEEEccHhHHhccccccC
Confidence 344555666788 8899999999998876654
No 34
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=76.92 E-value=9.1 Score=31.76 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=26.9
Q ss_pred CceecCCchh--hchHHHHHHhCCcccee-chhhhhhhhHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKE-DEMDCLVTGAN 121 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~-dEm~~li~G~~ 121 (229)
.|.+|||+|. .+.+.+++.++.++... +=..|...|+-
T Consensus 229 ~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~Gaa 269 (272)
T 3h1q_A 229 PVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLGIA 269 (272)
T ss_dssp CEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHHHH
T ss_pred EEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHHHH
Confidence 3678999994 57889999999887653 33456666653
No 35
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=73.09 E-value=7.3 Score=36.47 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=19.6
Q ss_pred CCCCCeEEEEeCCceeEEEEEeec
Q 027043 18 ESQISHLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~~~~ 41 (229)
.+.-..+|||+|||.+|++.++..
T Consensus 58 ~E~G~~laiDlGGTnirv~lV~~~ 81 (457)
T 2yhx_A 58 AQAGSFLAIVMGGGDLEVILISLA 81 (457)
T ss_dssp CCCEEEEEEEECSSEEEEEEEEEE
T ss_pred CccceEEEEEeCCCeEEEEEEEeC
Confidence 445567999999999999998743
No 36
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=70.57 E-value=2.7 Score=37.06 Aligned_cols=42 Identities=14% Similarity=0.050 Sum_probs=33.0
Q ss_pred CceecCCchhhchHHHHHHhCCcccee-chhhhhhhhHHHHHh
Q 027043 84 NLHLAGGGAYKFADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 125 (229)
Q Consensus 84 ~i~~TGGGA~k~~~~~~~~lg~~~~k~-dEm~~li~G~~fLl~ 125 (229)
.|.+|||||.-+.+.+++.+++++... |=+.|.+.|..-+++
T Consensus 281 ~IvltGGGA~l~~~~l~~~~~~~v~v~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 281 SLIFIGGTTQKLKEQISKTYPNNSIITNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp EEEEESTTHHHHHHHHHHHSTTCEECCSSGGGHHHHHHHHHHH
T ss_pred EEEEECChHHHHHHHHHHHcCCCCEecCCChhhHHHHHHHHHh
Confidence 467899999888899999998655444 457799999877664
No 37
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=70.27 E-value=7 Score=39.64 Aligned_cols=23 Identities=26% Similarity=0.452 Sum_probs=19.2
Q ss_pred CCCCCeEEEEeCCceeEEEEEee
Q 027043 18 ESQISHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~~~ 40 (229)
.+.-..+|||+|||.+|++.++.
T Consensus 75 ~E~G~~laiDlGGTnirv~lv~~ 97 (917)
T 1cza_N 75 SEKGDFIALDLGGSSFRILRVQV 97 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEE
T ss_pred CCcceEEEEEeCCCeEEEEEEEe
Confidence 34556799999999999999873
No 38
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=69.15 E-value=11 Score=35.22 Aligned_cols=23 Identities=30% Similarity=0.410 Sum_probs=19.0
Q ss_pred CCCCeEEEEeCCceeEEEEEeec
Q 027043 19 SQISHLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 19 ~~~~~igiDIGGSL~Kivy~~~~ 41 (229)
+.-..+|||+|||..+++.++-.
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~ 88 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLE 88 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEEC
T ss_pred ccceEEEEEeCCCeEEEEEEecC
Confidence 34556999999999999998843
No 39
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=66.06 E-value=8 Score=36.66 Aligned_cols=23 Identities=35% Similarity=0.496 Sum_probs=19.0
Q ss_pred CCCCeEEEEeCCceeEEEEEeec
Q 027043 19 SQISHLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 19 ~~~~~igiDIGGSL~Kivy~~~~ 41 (229)
+.-.-+|||+|||..|++.++-.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~ 100 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLG 100 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEEC
Confidence 34467999999999999998743
No 40
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=62.20 E-value=13 Score=31.27 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=31.0
Q ss_pred HHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEE
Q 027043 99 IKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFER 174 (229)
Q Consensus 99 ~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~R 174 (229)
+++.+++++.-.+...|...|-.+ .-+++++.+|||+-.=-+-+ ++..|
T Consensus 87 l~~~~~~pv~v~NDanaaalge~~--------------------------~~~~~~l~~GtGiG~gii~~-G~l~~ 135 (226)
T 3lm2_A 87 YEGAFGRPVRIVNDALMQAIGSYN--------------------------GGRMLFLGLGTGLGAAMIVE-NVAQP 135 (226)
T ss_dssp HHHHHTSCEEEEEHHHHHHHHHCC--------------------------SSEEEEEEESSSEEEEEEET-TEEEE
T ss_pred hHHhcCCeEEEEEHHHHHHHHHhh--------------------------cCcEEEEEeCCceEEEEEEC-CEEee
Confidence 456778888888888876654211 02488999999886544433 34444
No 41
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=60.57 E-value=37 Score=30.03 Aligned_cols=91 Identities=18% Similarity=0.207 Sum_probs=60.9
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEE
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFER 174 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~R 174 (229)
+..-|...+++|++-++-+++.+....+. . ...+|..|+=-|.+++++.+++ ++|++
T Consensus 95 ~ak~La~~~~~Pl~~v~hl~aHa~sa~~~-s---------------------~~~~pl~L~vsGg~t~l~~~~~-~~~~~ 151 (334)
T 3eno_A 95 AARTISVLTGKPIIGVNHPLGHIEIGRRV-T---------------------GAIDPVMLYVSGGNTQVIAHVN-GRYRV 151 (334)
T ss_dssp HHHHHHHHHTCCCEEECHHHHHHHHHHHH-H---------------------TCSSCEEEEESSSCEEEEEECS-SBEEE
T ss_pred HHHHHhhccCCCeEEeccHHHHHHHHHhc-C---------------------CCCCCEEEEEECCCcEEEEEeC-CEEEE
Confidence 34445556789999999999988766543 2 1235677777788999999986 89999
Q ss_pred eeccc-cC-chhHHhhhhhhcCCCCH---HHHHHHhhCCCC
Q 027043 175 ISGTS-VG-GGTFWGLGRLLTNCKSF---DELLELSHQGNN 210 (229)
Q Consensus 175 VgGss-iG-GGT~~GL~~LLtg~~~f---deil~lA~~Gd~ 210 (229)
+|.|. .. |-.|=..+++| |.. | -++..||.+|+.
T Consensus 152 lg~t~d~S~G~~fD~vA~~L-Gl~-y~g~~~le~lA~~g~~ 190 (334)
T 3eno_A 152 LGETLDIGIGNMIDKFAREA-GIP-FPGGPEIEKLAMKGTK 190 (334)
T ss_dssp EEEBSSCCHHHHHHHHHTTT-TCC-SCHHHHHHTTGGGCCS
T ss_pred eccCCCccHHHHHHHHHHHc-CCC-CCCHHHHHHHHhcCCC
Confidence 99862 12 23333444444 332 3 367778889874
No 42
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=56.32 E-value=23 Score=32.67 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=16.6
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||||+|.+|.+-|+..
T Consensus 6 ~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEeCCcceEEEEECCC
Confidence 5899999999999998843
No 43
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=52.68 E-value=25 Score=32.21 Aligned_cols=18 Identities=28% Similarity=0.499 Sum_probs=16.1
Q ss_pred eEEEEeCCceeEEEEEee
Q 027043 23 HLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~ 40 (229)
.+|||+|+|.+|.+-++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 489999999999999874
No 44
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=50.31 E-value=9.1 Score=33.78 Aligned_cols=42 Identities=24% Similarity=0.124 Sum_probs=31.0
Q ss_pred CceecCCchhhchHHHHHHhCCccc---eechhhhhhhhHHHHHh
Q 027043 84 NLHLAGGGAYKFADLIKEKLGVVLD---KEDEMDCLVTGANFLLK 125 (229)
Q Consensus 84 ~i~~TGGGA~k~~~~~~~~lg~~~~---k~dEm~~li~G~~fLl~ 125 (229)
.|.+|||||.-+.+.+++.++.... -.|=..|.+.|+..++.
T Consensus 299 ~IvL~GGga~ll~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 299 SLIPVGGGSNLIGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEESTTHHHHGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 4678999997788888888864322 33556899999887664
No 45
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=47.98 E-value=44 Score=24.57 Aligned_cols=77 Identities=19% Similarity=0.239 Sum_probs=43.7
Q ss_pred CeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecccCHHHHHHHHHhcCc---ee--------cCC
Q 027043 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNL---HL--------AGG 90 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~i~~i~~~~i---~~--------TGG 90 (229)
..+|||.|-.-+=++..++...- ...-..+.-..+ ...+++..+++++..+ .+ |-|
T Consensus 2 riLglD~G~kriGvAvsd~~~~~------------A~pl~ti~~~~~-~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~ 68 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEGVPL------------ASGRGYLVRKTL-EEDVEALLDFVRREGLGKLVVGLPLRTDLKES 68 (98)
T ss_dssp CEEEEEESSSEEEEEEECSCCSS------------CCCEEEEECCCH-HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSC
T ss_pred cEEEEEeCCCEEEEEEEeCCCCe------------eeeeEEEEccCc-HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcC
Confidence 47899999999999986542210 001112220011 1234455566665432 11 222
Q ss_pred c----hhhchHHHHHHhCCccceech
Q 027043 91 G----AYKFADLIKEKLGVVLDKEDE 112 (229)
Q Consensus 91 G----A~k~~~~~~~~lg~~~~k~dE 112 (229)
- +.+|.+.+++. ++++.-+||
T Consensus 69 ~~~~~~~~f~~~L~~~-~lpV~~~DE 93 (98)
T 1iv0_A 69 AQAGKVLPLVEALRAR-GVEVELWDE 93 (98)
T ss_dssp CCSSTTHHHHHHHHHT-TCEEEEECC
T ss_pred HHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 2 25788888877 899999998
No 46
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=47.60 E-value=27 Score=27.64 Aligned_cols=92 Identities=15% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEe-cccCHHHHHHHHHhcCce--e---------c
Q 027043 21 ISHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKF-ETSKIIDCLEFIRSKNLH--L---------A 88 (229)
Q Consensus 21 ~~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f-~t~~i~~~i~~i~~~~i~--~---------T 88 (229)
+..+|||.|-..++++-.++... . ....+.++...- .....++..+++++..+. + |
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~----------~--a~p~~~I~~~~~r~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt 70 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGW----------T--AQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGT 70 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSS----------S--EEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTB
T ss_pred CEEEEEEccCCEEEEEEEECCCC----------E--EeeEEEEEcCCcchHHHHHHHHHHHHHcCCCEEEEeeeecCCcc
Confidence 34789999999999999763211 0 001122221000 112355666777654321 1 2
Q ss_pred CCc----hhhchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 89 GGG----AYKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 89 GGG----A~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
-+- |..|...+...+++++.-+||=-+.+..-..|.
T Consensus 71 ~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts~~Ak~~l~ 110 (150)
T 1vhx_A 71 VGPRGEASQTFAKVLETTYNVPVVLWDERLTTMAAEKMLI 110 (150)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSCEEEECCSSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCCCEEEecCCCCHHHHHHHHH
Confidence 222 146776777778999999999777766655554
No 47
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=47.18 E-value=12 Score=34.45 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=16.5
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|.+-|+..
T Consensus 6 ~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 6 CVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp EEEEEECSSEEEEEEEEEE
T ss_pred EEEEEecCCCceEEEEEec
Confidence 5899999999999888743
No 48
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=46.55 E-value=12 Score=34.79 Aligned_cols=58 Identities=12% Similarity=0.151 Sum_probs=33.8
Q ss_pred EEEEecCCceEEEEEeCC----------------CceEEeeccccCchhHHhhhhhhcC-CCCHHHHHHHhhCCC
Q 027043 152 YLLVNIGSGVSMIKVDGD----------------GKFERISGTSVGGGTFWGLGRLLTN-CKSFDELLELSHQGN 209 (229)
Q Consensus 152 yLlVNIGSGvSi~kV~~~----------------~~~~RVgGssiGGGT~~GL~~LLtg-~~~fdeil~lA~~Gd 209 (229)
-+.+++||+..+..+... +.|---|++..||..+.=|...+.. ..++++++++|++-.
T Consensus 254 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~ 328 (504)
T 3ll3_A 254 HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAP 328 (504)
T ss_dssp EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSC
T ss_pred cEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCC
Confidence 688899998766555431 1222224466676666545555533 356777777776533
No 49
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=45.87 E-value=12 Score=34.70 Aligned_cols=19 Identities=32% Similarity=0.422 Sum_probs=16.6
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|.+-++..
T Consensus 4 ~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEeeCCcceEEEEECCC
Confidence 5899999999999988753
No 50
>2wq4_A Lectin; LUNG, pathogen, infection, sugar binding protein; HET: SFU; 1.42A {Burkholderia cenocepacia}
Probab=45.15 E-value=17 Score=28.76 Aligned_cols=42 Identities=31% Similarity=0.662 Sum_probs=27.3
Q ss_pred CccEEeeCCCeeeeecCCCCCccEEEE---ecCCceEEEEEeCCCceEEeeccc
Q 027043 129 QEAFTYVDGQKEFVQIDQNDLYPYLLV---NIGSGVSMIKVDGDGKFERISGTS 179 (229)
Q Consensus 129 ~e~f~~~~~~~~~~~~~~~~~yPyLlV---NIGSGvSi~kV~~~~~~~RVgGss 179 (229)
+-+|+|+..-.+ .....||-|| ++|||||++|. ++..|-||.
T Consensus 71 ~g~ftysskipe-----~sgrmpftlva~~~~~s~vs~ik~----qw~~irgs~ 115 (156)
T 2wq4_A 71 DGCFTYSSKVPE-----STGRMPFTLVATIDVGSGVTFVKG----QWKSVRGSA 115 (156)
T ss_dssp EEEEECSSSSCS-----SCCCCCEEEEEEEEGGGTCCCEEE----EEEEETTCE
T ss_pred ecceeecccCCc-----ccCccceEEEEEEEecCCceEeee----eeeccccce
Confidence 457888764322 1346788776 58999999986 345555543
No 51
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=45.12 E-value=12 Score=34.54 Aligned_cols=19 Identities=32% Similarity=0.462 Sum_probs=16.6
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|.+-++..
T Consensus 5 ~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 5 VLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEecCCchhEEEEECCC
Confidence 5899999999999998753
No 52
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=44.86 E-value=14 Score=32.17 Aligned_cols=36 Identities=25% Similarity=0.542 Sum_probs=24.9
Q ss_pred ccEEEEecCCceE---EEEEeCCCceEEe---eccccCchhHH
Q 027043 150 YPYLLVNIGSGVS---MIKVDGDGKFERI---SGTSVGGGTFW 186 (229)
Q Consensus 150 yPyLlVNIGSGvS---i~kV~~~~~~~RV---gGssiGGGT~~ 186 (229)
..++++.+|.||+ ++++.. +.|+.+ +...+||-.|-
T Consensus 206 ~~vlV~D~Gggt~dvsv~~~~~-~~~~~~~~~~~~~lGG~~~d 247 (394)
T 3qfu_A 206 HQIIVYDLGGGTFDVSLLSIEN-GVFEVQATSGDTHLGGEDFD 247 (394)
T ss_dssp EEEEEEEECSSCEEEEEEEEET-TEEEEEEEEEETTCSHHHHH
T ss_pred ceEEEEEcCCCceeEEEEEEeC-CEEEEEEEcCCCCCChHHHH
Confidence 4579999999976 666665 555442 33678887764
No 53
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=44.71 E-value=42 Score=31.18 Aligned_cols=17 Identities=29% Similarity=0.536 Sum_probs=15.9
Q ss_pred eEEEEeCCceeEEEEEe
Q 027043 23 HLALDIGGSLIKVVYFL 39 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~ 39 (229)
.+|||+|+|.+|.+-|+
T Consensus 8 ~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 8 TIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp CEEEEECSSEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEE
Confidence 58999999999999987
No 54
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=42.81 E-value=15 Score=34.17 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=34.8
Q ss_pred EEEEecCCceEEEEEeC---------------CCceEEeeccccCchhHHhhhhhh--cCCC-CHHHHHHHhhC
Q 027043 152 YLLVNIGSGVSMIKVDG---------------DGKFERISGTSVGGGTFWGLGRLL--TNCK-SFDELLELSHQ 207 (229)
Q Consensus 152 yLlVNIGSGvSi~kV~~---------------~~~~~RVgGssiGGGT~~GL~~LL--tg~~-~fdeil~lA~~ 207 (229)
-+.+++||+..+..+.+ ++.|--.|++.-||..+-=+...+ .+.. +++++.++|++
T Consensus 260 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~ 333 (508)
T 3ifr_A 260 DVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAE 333 (508)
T ss_dssp EEEEEESSSEEEEECBSCCCCBTTBBCCBCSSTTCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHT
T ss_pred cEEEEechhhhheeeCCCcccCCCcceeeeecCCceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhc
Confidence 57899999877665543 233433455566666654344444 2432 79999999875
No 55
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=42.19 E-value=20 Score=32.52 Aligned_cols=18 Identities=33% Similarity=0.497 Sum_probs=13.6
Q ss_pred CeEEEEeCCceeEEEEEe
Q 027043 22 SHLALDIGGSLIKVVYFL 39 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~ 39 (229)
+.+|+||||=.+|++.++
T Consensus 1 ~iiG~DIGGAn~K~a~~~ 18 (334)
T 3cet_A 1 MILGIDIGGANTKITELH 18 (334)
T ss_dssp CEEEEEEC--CEEEEEEC
T ss_pred CeeEEEecccceeeeeec
Confidence 468999999999998854
No 56
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=40.74 E-value=17 Score=31.36 Aligned_cols=39 Identities=26% Similarity=0.372 Sum_probs=28.4
Q ss_pred CceecCCchhhchHHHHHHhCC---ccce-echhhhhhhhHHH
Q 027043 84 NLHLAGGGAYKFADLIKEKLGV---VLDK-EDEMDCLVTGANF 122 (229)
Q Consensus 84 ~i~~TGGGA~k~~~~~~~~lg~---~~~k-~dEm~~li~G~~f 122 (229)
.|.+|||||.-+.+.+++.++. ++.. .+=..|...|+..
T Consensus 275 ~vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~ 317 (320)
T 2zgy_A 275 HVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL 317 (320)
T ss_dssp EEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred eEEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHH
Confidence 3678999997788889888887 3433 3447788888654
No 57
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=40.28 E-value=16 Score=31.49 Aligned_cols=42 Identities=21% Similarity=0.580 Sum_probs=34.1
Q ss_pred CceecCCchh--hchHHHHHHhCCcccee-chhhhhhhhHHHHHh
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKE-DEMDCLVTGANFLLK 125 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~-dEm~~li~G~~fLl~ 125 (229)
.|.+|||+|. .+.+.+++.++.++... |=..|+..|+..+..
T Consensus 280 ~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 280 GIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp CEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred cEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 5788999995 58999999999877654 567899999887664
No 58
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=39.80 E-value=18 Score=33.61 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=17.6
Q ss_pred CeEEEEeCCceeEEEEEeecC
Q 027043 22 SHLALDIGGSLIKVVYFLRSN 42 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~ 42 (229)
..+|||+|+|.+|.+-|+...
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNG 26 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEcCCCceEEEEECCCC
Confidence 368999999999999988543
No 59
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=38.94 E-value=17 Score=33.67 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=16.6
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|.+-++..
T Consensus 4 ~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEecCCcceEEEEECCC
Confidence 5899999999999998754
No 60
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=38.69 E-value=17 Score=33.94 Aligned_cols=19 Identities=26% Similarity=0.384 Sum_probs=16.7
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|++-++..
T Consensus 28 ~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 28 ILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEeCCcceEEEEECCC
Confidence 5899999999999998754
No 61
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=38.41 E-value=18 Score=33.55 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=17.2
Q ss_pred eEEEEeCCceeEEEEEeecC
Q 027043 23 HLALDIGGSLIKVVYFLRSN 42 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~~ 42 (229)
.+|||+|+|.+|.+-|+...
T Consensus 8 ~lgIDiGtts~k~~l~d~~G 27 (501)
T 3g25_A 8 ILSIDQGTTSSRAILFNQKG 27 (501)
T ss_dssp EEEEEECSSEEEEEEECTTS
T ss_pred EEEEEeCccceEEEEEcCCC
Confidence 68999999999999987543
No 62
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=38.40 E-value=21 Score=31.35 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=17.7
Q ss_pred CCCeEEEEeCCceeEEEEEee
Q 027043 20 QISHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 20 ~~~~igiDIGGSL~Kivy~~~ 40 (229)
..+.+|||+|.|.++++|+.+
T Consensus 22 ~~~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEET
T ss_pred cCCEEEEEcCCccEEEEEEEC
Confidence 456799999999999999864
No 63
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=38.31 E-value=19 Score=33.79 Aligned_cols=21 Identities=14% Similarity=0.219 Sum_probs=17.5
Q ss_pred CeEEEEeCCceeEEEEEeecC
Q 027043 22 SHLALDIGGSLIKVVYFLRSN 42 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~ 42 (229)
..+|||+|+|.+|.+-|+...
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G 26 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQG 26 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEECcccEEEEEECCCC
Confidence 358999999999999888543
No 64
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=37.47 E-value=19 Score=33.53 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=16.8
Q ss_pred eEEEEeCCceeEEEEEeec
Q 027043 23 HLALDIGGSLIKVVYFLRS 41 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~ 41 (229)
.+|||+|+|.+|.+-|+..
T Consensus 5 ~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 5 IVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEcCCcceEEEEECCC
Confidence 5899999999999998754
No 65
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=37.30 E-value=20 Score=33.52 Aligned_cols=55 Identities=16% Similarity=0.249 Sum_probs=36.5
Q ss_pred EEEEecCCceEEEEEeC----------------CCceEEeeccccCchhHHhhhhhhcCCCCHHHHHHHhhCC
Q 027043 152 YLLVNIGSGVSMIKVDG----------------DGKFERISGTSVGGGTFWGLGRLLTNCKSFDELLELSHQG 208 (229)
Q Consensus 152 yLlVNIGSGvSi~kV~~----------------~~~~~RVgGssiGGGT~~GL~~LLtg~~~fdeil~lA~~G 208 (229)
-+.+++||+..+..+.. ++.|-..+++..||..+-=+.+.+ +. +++++.++|++=
T Consensus 288 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gg~~l~w~~~~~-~~-~~~~l~~~a~~~ 358 (515)
T 3i8b_A 288 DVSISLGTSGVAAAISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAAL-GV-DYDELAKLAFAS 358 (515)
T ss_dssp EEEEEESSSEEEEECBSSCCCCTTSCSEEEECSSSSEEEEEEESCSTHHHHHHHHHH-TC-CHHHHHHHHHHS
T ss_pred cEEEEechhhhhhcccCccccCCCCcEEeeecCCCCEEEeeecccHHHHHHHHHHHh-CC-CHHHHHHHHHhC
Confidence 57889999876654322 233555666777777775555555 33 799999998653
No 66
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=36.76 E-value=21 Score=30.68 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=27.7
Q ss_pred ccEEEEecCCceEEEEEeCCCce--EEeecc-ccCchhHH-hhhhhh
Q 027043 150 YPYLLVNIGSGVSMIKVDGDGKF--ERISGT-SVGGGTFW-GLGRLL 192 (229)
Q Consensus 150 yPyLlVNIGSGvSi~kV~~~~~~--~RVgGs-siGGGT~~-GL~~LL 192 (229)
...++|.||.||+=+-|-.++.. ...+|+ .+||..|- -+...|
T Consensus 164 ~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l 210 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDAL 210 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHT
T ss_pred CCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHH
Confidence 45899999999986655443432 334555 78888764 344444
No 67
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=36.10 E-value=1.4e+02 Score=23.14 Aligned_cols=89 Identities=21% Similarity=0.179 Sum_probs=53.3
Q ss_pred CeEEEEeCCceeEEEEEeecCCCCCcccCCCCCCCCCcCCceEEeEecccCHHHHHHHHHhcCce--ec-------CCch
Q 027043 22 SHLALDIGGSLIKVVYFLRSNGSGGSVDDSGKKSDPVLEGRLHFAKFETSKIIDCLEFIRSKNLH--LA-------GGGA 92 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~~~~~~~~~~~~~~~~~~~~~g~l~F~~f~t~~i~~~i~~i~~~~i~--~T-------GGGA 92 (229)
..+|||.|-.-+=++..++.... ...-..+....+ ...+++..+++++..+. +- |--+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~------------A~pl~ti~~~~~-~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~ 70 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT------------ARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQ 70 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE------------EEEEEEEEEETT-EECHHHHHHHHHHHCCSEEEEEEEECTTSCBC
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE------------EeeEEEEEcCCc-chHHHHHHHHHHHcCCCEEEEecccCCCcCcC
Confidence 36899999999999996642210 001122322111 23577777888775431 11 2112
Q ss_pred ------hhchHHHHHHhCCccceechhhhhhhhHHHH
Q 027043 93 ------YKFADLIKEKLGVVLDKEDEMDCLVTGANFL 123 (229)
Q Consensus 93 ------~k~~~~~~~~lg~~~~k~dEm~~li~G~~fL 123 (229)
.+|.+.+++.+++++.-+||=-+....-..|
T Consensus 71 ~~~~~~~~f~~~L~~~~~lpV~~~DERlTT~~A~~~l 107 (138)
T 1nu0_A 71 PLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL 107 (138)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC----
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCCcCHHHHHHHH
Confidence 5888899888999999999977666655554
No 68
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=35.77 E-value=29 Score=28.56 Aligned_cols=41 Identities=27% Similarity=0.321 Sum_probs=28.6
Q ss_pred EEEEecCCceEEEEEeCCCceEEeeccccCchhHHh-hhhhh
Q 027043 152 YLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFWG-LGRLL 192 (229)
Q Consensus 152 yLlVNIGSGvSi~kV~~~~~~~RVgGssiGGGT~~G-L~~LL 192 (229)
.+++.||.|++=+-+-.++......-..+||..|.= |...|
T Consensus 141 ~~viDiGggst~~~~~~~g~~~~~~~~~~Gg~~~~~~l~~~l 182 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHLSLVLAGSY 182 (272)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEECCBSCCHHHHHHHHHHHH
T ss_pred EEEEEECCCcEEEEEEECCEEEEEecCCCcHHHHHHHHHHHh
Confidence 499999999874433334667777788899998844 44444
No 69
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=35.19 E-value=21 Score=33.19 Aligned_cols=56 Identities=11% Similarity=0.117 Sum_probs=33.4
Q ss_pred EEEEecCCceEEEEEeC-------C------------CceEEeeccccCchhHHhhhhhhc--CCCCHHHHHHHhhC
Q 027043 152 YLLVNIGSGVSMIKVDG-------D------------GKFERISGTSVGGGTFWGLGRLLT--NCKSFDELLELSHQ 207 (229)
Q Consensus 152 yLlVNIGSGvSi~kV~~-------~------------~~~~RVgGssiGGGT~~GL~~LLt--g~~~fdeil~lA~~ 207 (229)
-+.+++||+..+..+.+ + +.+--+|++..||..+-=+...+. ...+|+++.++|++
T Consensus 258 ~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~ 334 (511)
T 3hz6_A 258 DAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAA 334 (511)
T ss_dssp CEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHH
T ss_pred cEEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHh
Confidence 57889999866655433 1 111223445556655544555554 44689999988753
No 70
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=34.89 E-value=2.7e+02 Score=25.71 Aligned_cols=92 Identities=14% Similarity=0.119 Sum_probs=59.6
Q ss_pred chHHHHHHhCCccceechhhhhhhhHHHHHhhCCCccEEeeCCCeeeeecCCCCCccEEEEecCCceEEEEEeCCCceEE
Q 027043 95 FADLIKEKLGVVLDKEDEMDCLVTGANFLLKAVHQEAFTYVDGQKEFVQIDQNDLYPYLLVNIGSGVSMIKVDGDGKFER 174 (229)
Q Consensus 95 ~~~~~~~~lg~~~~k~dEm~~li~G~~fLl~~~~~e~f~~~~~~~~~~~~~~~~~yPyLlVNIGSGvSi~kV~~~~~~~R 174 (229)
+..-+...+++|++-++.+++.+....+- . ...+|..|+=-|-.+.++.+++ ++|++
T Consensus 94 ~ak~la~~~~~p~~~v~h~~aH~~~~~~~-~---------------------~~~~p~~l~vsGg~t~~~~~~~-~~~~~ 150 (540)
T 3en9_A 94 VARTLSLTLKKPIIGVNHCIAHIEIGKLT-T---------------------EAEDPLTLYVSGGNTQVIAYVS-KKYRV 150 (540)
T ss_dssp HHHHHHHHHTCCEEEEEHHHHHHHHHHHH-S---------------------SCSSCEEEEECSSCEEEEEEET-TEEEE
T ss_pred HHHHHHHHhCCCeeEeccHHHHHHHHHHh-c---------------------CCCCCcEEEEcCCCcEEEEEeC-CceEE
Confidence 34445566899999999999998775542 1 1235666666677788889987 88999
Q ss_pred eeccc-cC-chhHHhhhhhhc-CCCCHHHHHHHhhCCC
Q 027043 175 ISGTS-VG-GGTFWGLGRLLT-NCKSFDELLELSHQGN 209 (229)
Q Consensus 175 VgGss-iG-GGT~~GL~~LLt-g~~~fdeil~lA~~Gd 209 (229)
+|.|. .. |=.|=-.+++|- +-..=-.+-++|++|+
T Consensus 151 lg~t~d~s~G~~~D~~a~~lgl~~~gg~~ie~lA~~g~ 188 (540)
T 3en9_A 151 FGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGK 188 (540)
T ss_dssp EEEBSSSCHHHHHHHHHHHTTCCSSCHHHHHHHHHTCC
T ss_pred EeeccchHhHHHHHHHHHHcCCCCCCHHHHHHHHHcCC
Confidence 98863 11 222333444441 1122247778899997
No 71
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=34.02 E-value=24 Score=33.29 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=17.1
Q ss_pred CeEEEEeCCceeEEEEEee
Q 027043 22 SHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~ 40 (229)
..+|||+|+|.+|.+-|+.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 3689999999999999986
No 72
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=34.02 E-value=13 Score=33.23 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=28.6
Q ss_pred CceecCCchhhch----HHHHHHhCCccceechhhhhhhhHHHHHh
Q 027043 84 NLHLAGGGAYKFA----DLIKEKLGVVLDKEDEMDCLVTGANFLLK 125 (229)
Q Consensus 84 ~i~~TGGGA~k~~----~~~~~~lg~~~~k~dEm~~li~G~~fLl~ 125 (229)
.|.+|||||.-+. +.+++.+.. . .|=..|.++|...+..
T Consensus 293 ~Ivl~GGGa~l~~~~l~~~i~~~~~~--~-~~p~~anA~G~~~~~~ 335 (355)
T 3js6_A 293 RIIVTGGGANIHFDSLSHYYSDVFEK--A-DDSQFSNVRGYEKLGE 335 (355)
T ss_dssp EEEEESTTHHHHHHHHHHHSSSCEEC--C-SSGGGHHHHHHHHHHH
T ss_pred EEEEECcchhcchhhHHHHHHHHCCC--C-CCcHHHHHHHHHHHHH
Confidence 3678999997666 466655532 2 7888899999887765
No 73
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=31.16 E-value=25 Score=30.57 Aligned_cols=44 Identities=30% Similarity=0.487 Sum_probs=0.0
Q ss_pred HHHHHHHH-------HhcCceecCCchhh--chHHHHHHhCCccceechhhhh
Q 027043 73 IIDCLEFI-------RSKNLHLAGGGAYK--FADLIKEKLGVVLDKEDEMDCL 116 (229)
Q Consensus 73 i~~~i~~i-------~~~~i~~TGGGA~k--~~~~~~~~lg~~~~k~dEm~~l 116 (229)
+.+++++. .-..|.+|||+|.- +.+.+++.+++++...+-++++
T Consensus 291 i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v 343 (377)
T 2ych_A 291 LRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAV 343 (377)
T ss_dssp HHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGS
T ss_pred HHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhc
No 74
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=30.99 E-value=30 Score=29.72 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=24.9
Q ss_pred ccEEEEecCCceEEEEEeCCCceEEeeccccCchhHH
Q 027043 150 YPYLLVNIGSGVSMIKVDGDGKFERISGTSVGGGTFW 186 (229)
Q Consensus 150 yPyLlVNIGSGvSi~kV~~~~~~~RVgGssiGGGT~~ 186 (229)
...++|.+|.||+=+-+-..+.....+...+||-.|-
T Consensus 147 ~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id 183 (344)
T 1jce_A 147 SGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMD 183 (344)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHH
Confidence 3489999999988555444344445566777777663
No 75
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=30.20 E-value=55 Score=28.81 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=32.6
Q ss_pred CceecCCchh--hchHHHHHHhCCc---------cceechhhhhhhhHHHHHh
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVV---------LDKEDEMDCLVTGANFLLK 125 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~---------~~k~dEm~~li~G~~fLl~ 125 (229)
.|.+|||++. ...+.+++.++.+ ....+=.+|+..|+-+...
T Consensus 347 ~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~ 399 (409)
T 4gni_A 347 EVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQAS 399 (409)
T ss_dssp EEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHH
T ss_pred EEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhh
Confidence 3577999984 7788899999865 2456777899999987764
No 76
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=29.90 E-value=31 Score=30.48 Aligned_cols=35 Identities=9% Similarity=0.233 Sum_probs=24.8
Q ss_pred ccEEEEecCCce---EEEEEeCCCceEEe---eccccCchhH
Q 027043 150 YPYLLVNIGSGV---SMIKVDGDGKFERI---SGTSVGGGTF 185 (229)
Q Consensus 150 yPyLlVNIGSGv---Si~kV~~~~~~~RV---gGssiGGGT~ 185 (229)
.-+|++.+|.|| |++++.+ +.++.+ ++..+||-.|
T Consensus 205 ~~vlv~D~GgGT~dvsv~~~~~-~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 205 KIIVVADLGGSRSDVTVLASRS-GMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp EEEEEEEECSSCEEEEEEEEET-TEEEEEEEEEESSSSHHHH
T ss_pred CEEEEEECCCCceEEEEEEEeC-CeEEEEEecCCCCcCHHHH
Confidence 348999999996 5677765 566655 4577887654
No 77
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=29.87 E-value=29 Score=31.42 Aligned_cols=18 Identities=11% Similarity=0.431 Sum_probs=16.2
Q ss_pred CeEEEEeCCceeEEEEEe
Q 027043 22 SHLALDIGGSLIKVVYFL 39 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~ 39 (229)
.-+-+|||||+|.|+-+.
T Consensus 128 ~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 128 NCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp SEEEEEECSSCEEEEEEE
T ss_pred CEEEEEcCcchhhhhhhc
Confidence 478999999999999887
No 78
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=29.06 E-value=53 Score=30.17 Aligned_cols=41 Identities=24% Similarity=0.329 Sum_probs=30.1
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+..++.+.+|+++...+.-++-..|+-.+.
T Consensus 401 ~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la 443 (495)
T 2dpn_A 401 VLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMA 443 (495)
T ss_dssp CEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred EEEEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHH
Confidence 4788999983 5666777889999987766666666666554
No 79
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=28.21 E-value=59 Score=29.92 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=30.4
Q ss_pred cCceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 83 KNLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 83 ~~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
..|.++||||. -+..++.+.+|+++...+.-++-..|+-.+.
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la 452 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLA 452 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHH
Confidence 34788999983 5666777889999987776666666666554
No 80
>2ko4_A Mediator of RNA polymerase II transcription subun; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_A
Probab=28.12 E-value=7.9 Score=28.42 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=25.3
Q ss_pred cCCCCHHHHHHHhhCCCCCcCce-EeeeecC
Q 027043 193 TNCKSFDELLELSHQGNNRVIDM-LVGDIYG 222 (229)
Q Consensus 193 tg~~~fdeil~lA~~Gd~~~vDm-lV~DIYG 222 (229)
-|.+++.++.+||+++-...-|| +++|||+
T Consensus 34 pgVnTW~qI~el~qkk~i~~~~m~iik~iy~ 64 (81)
T 2ko4_A 34 PNINTWQQVTALAQQKLLTPQDMEAAKEVYK 64 (81)
T ss_dssp TTTCBHHHHHHHHTTTSSCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 47899999999999999888888 4577775
No 81
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=28.00 E-value=53 Score=30.22 Aligned_cols=41 Identities=17% Similarity=0.240 Sum_probs=30.7
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+..++.+.+|+++.....-++-..|+-.+.
T Consensus 396 ~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 438 (497)
T 2zf5_O 396 ELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLA 438 (497)
T ss_dssp CEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred eEEEeCccccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHH
Confidence 4788999985 6677778889999987766666666666554
No 82
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=26.51 E-value=48 Score=33.55 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=19.8
Q ss_pred CCCCCeEEEEeCCceeEEEEEee
Q 027043 18 ESQISHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~~~ 40 (229)
.+.-..+|||+|||..+++.++-
T Consensus 523 ~E~G~~lalDlGGTn~Rv~~V~l 545 (917)
T 1cza_N 523 TENGDFLALDLGGTNFRVLLVKI 545 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEE
T ss_pred CcceEEEEEEECCCcEEEEEEEe
Confidence 45667799999999999999884
No 83
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=26.00 E-value=54 Score=30.24 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=29.0
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.....-++...|.-.+.
T Consensus 407 ~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la 449 (501)
T 3g25_A 407 SLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLA 449 (501)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred EEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHH
Confidence 3678999983 5566677889999877665566666665554
No 84
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=25.79 E-value=61 Score=30.17 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=29.4
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.+.+.-++-..|+-++.
T Consensus 428 ~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA 470 (520)
T 4e1j_A 428 VLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLA 470 (520)
T ss_dssp CEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHH
T ss_pred eEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHH
Confidence 5788999983 4566677889999987665556666666554
No 85
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=25.66 E-value=35 Score=29.67 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=16.4
Q ss_pred CeEEEEeCCceeEEEEEee
Q 027043 22 SHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~ 40 (229)
..+|||+|.|.++++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~ 21 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDG 21 (383)
T ss_dssp CCCEEECCSSEEEEEEEET
T ss_pred cEEEEEcCCCCEEEEEEEC
Confidence 3589999999999999863
No 86
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=25.55 E-value=55 Score=30.67 Aligned_cols=23 Identities=30% Similarity=0.468 Sum_probs=19.3
Q ss_pred CCCCCeEEEEeCCceeEEEEEee
Q 027043 18 ESQISHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~~~ 40 (229)
.+.-..+|+|+|||..+++.++-
T Consensus 56 ~E~G~~LAlDlGGTn~RV~~V~l 78 (445)
T 3hm8_A 56 SERGDFLALDLGGTNFRVLLVRV 78 (445)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEE
T ss_pred ceeeEEEEEEecCCeEEEEEEEE
Confidence 45556899999999999999873
No 87
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=25.20 E-value=50 Score=28.60 Aligned_cols=41 Identities=22% Similarity=0.362 Sum_probs=31.8
Q ss_pred CceecCCchh--hchHHHHHHh-CCcccee-chhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKL-GVVLDKE-DEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~l-g~~~~k~-dEm~~li~G~~fLl 124 (229)
.|.+|||+|. ...+.+++.+ +.++.+. +-.+|+..|+..+.
T Consensus 346 ~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 390 (394)
T 3qfu_A 346 DIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQA 390 (394)
T ss_dssp EEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHH
T ss_pred EEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 4677999994 6888999999 7776554 77789999987654
No 88
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=25.17 E-value=56 Score=30.35 Aligned_cols=41 Identities=20% Similarity=0.394 Sum_probs=30.0
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.+.+.-++...|+-+|.
T Consensus 405 ~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA 447 (526)
T 3ezw_A 405 ALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 447 (526)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred EEEEECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHH
Confidence 4678999983 5566677889999987766666666766664
No 89
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=25.13 E-value=44 Score=29.33 Aligned_cols=21 Identities=29% Similarity=0.441 Sum_probs=16.8
Q ss_pred CCCCCeEEEEeCCceeEEEEE
Q 027043 18 ESQISHLALDIGGSLIKVVYF 38 (229)
Q Consensus 18 ~~~~~~igiDIGGSL~Kivy~ 38 (229)
++..+.++||+|.+.+|+-|.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~ 22 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFA 22 (375)
T ss_dssp --CCCCEEEEECSSEEEEEET
T ss_pred CCCCceEEEECCCCeEEEEEC
Confidence 345678999999999999884
No 90
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=24.86 E-value=42 Score=31.26 Aligned_cols=20 Identities=25% Similarity=0.258 Sum_probs=16.9
Q ss_pred eEEEEeCCceeEEEEEeecC
Q 027043 23 HLALDIGGSLIKVVYFLRSN 42 (229)
Q Consensus 23 ~igiDIGGSL~Kivy~~~~~ 42 (229)
-+|||+|.|.+|.+-|+...
T Consensus 6 vlgID~GTss~Ka~l~d~~G 25 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDHDA 25 (526)
T ss_dssp EEEEEECSSEEEEEEECTTC
T ss_pred EEEEEccccceeeeEEcCCC
Confidence 47999999999999887543
No 91
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=24.85 E-value=57 Score=30.15 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=28.4
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.+...-++-..|.-++.
T Consensus 406 ~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 448 (506)
T 3h3n_X 406 LLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLA 448 (506)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHH
T ss_pred EEEEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHH
Confidence 4678999983 5566677889999876655555555655554
No 92
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=24.44 E-value=49 Score=28.76 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=31.1
Q ss_pred CceecCCchh--hchHHHHHHhCCccce-echhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDK-EDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k-~dEm~~li~G~~fLl 124 (229)
.|.+|||+|. .+.+.+++.++.++.. .+-.+|+..|+-.+.
T Consensus 336 ~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a 379 (383)
T 1dkg_D 336 DVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQG 379 (383)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHT
T ss_pred EEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHH
Confidence 3677999995 5889999999876643 455778899987653
No 93
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=24.38 E-value=61 Score=29.99 Aligned_cols=41 Identities=20% Similarity=0.135 Sum_probs=29.4
Q ss_pred CceecCCch--hhchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGA--YKFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA--~k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++|||| --+-.++.+.+|+++...+.-++-..|.-++.
T Consensus 396 ~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 438 (504)
T 3ll3_A 396 AINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLA 438 (504)
T ss_dssp EEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred EEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCchhHHHHHHH
Confidence 467899998 35566777889999988665566666666554
No 94
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=24.04 E-value=67 Score=29.78 Aligned_cols=41 Identities=32% Similarity=0.400 Sum_probs=28.3
Q ss_pred CceecCCchh--hchHHHHHHhCCcc-ceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVL-DKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~-~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++ .....-++-..|.-.+.
T Consensus 405 ~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 405 LLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHH
T ss_pred EEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHH
Confidence 4678999983 45666778899998 66555555556655554
No 95
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=23.98 E-value=66 Score=29.65 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=29.8
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.+...-++-..|+-++.
T Consensus 406 ~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA 448 (504)
T 2d4w_A 406 ELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAA 448 (504)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHH
T ss_pred eEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHH
Confidence 3678999983 5566777889999987776666666666554
No 96
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=23.56 E-value=53 Score=30.32 Aligned_cols=19 Identities=16% Similarity=0.204 Sum_probs=16.8
Q ss_pred CeEEEEeCCceeEEEEEee
Q 027043 22 SHLALDIGGSLIKVVYFLR 40 (229)
Q Consensus 22 ~~igiDIGGSL~Kivy~~~ 40 (229)
+.+|||+|.|.++++|+.+
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 4799999999999999864
No 97
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=23.21 E-value=69 Score=29.85 Aligned_cols=41 Identities=24% Similarity=0.337 Sum_probs=29.0
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.....-++-..|.-.+.
T Consensus 427 ~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA 469 (515)
T 3i8b_A 427 RILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQA 469 (515)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHHHHHHHHH
T ss_pred EEEEECchhcCHHHHHHHHHHhCCceEecCCcccHHHHHHHHH
Confidence 4678999983 4556677789999887665556666666554
No 98
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=22.84 E-value=69 Score=29.66 Aligned_cols=41 Identities=12% Similarity=0.177 Sum_probs=29.3
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.....-++-..|.-++.
T Consensus 403 ~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 445 (508)
T 3ifr_A 403 RFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVA 445 (508)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHH
T ss_pred EEEEeCCcccCHHHHHHHHHHhCCeEEecCCCCchHHHHHHHH
Confidence 4678999983 4556667789999987765566666666554
No 99
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=22.51 E-value=66 Score=30.08 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=29.4
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.+.+.-++...|+-+|.
T Consensus 445 ~i~~~GG~aks~~~~Qi~ADv~g~pV~~~~~~e~~alGAA~lA 487 (554)
T 3l0q_A 445 TMMASGGGTKNPIFVQEHANATGCAMLLPEESEAMLLGSAMMG 487 (554)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHCCEEEEESCSCHHHHHHHHHH
T ss_pred EEEEeCccccCHHHHHHHHHhhCCeEEecCCCcchHHHHHHHH
Confidence 3677999983 4566777889999987765566666666554
No 100
>1v8d_A Hypothetical protein (TT1679); X-RAY craytallography, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.16A {Thermus thermophilus} SCOP: c.140.1.1
Probab=22.36 E-value=31 Score=29.83 Aligned_cols=12 Identities=58% Similarity=0.908 Sum_probs=10.7
Q ss_pred eEEEEeCCceeE
Q 027043 23 HLALDIGGSLIK 34 (229)
Q Consensus 23 ~igiDIGGSL~K 34 (229)
+-|||||.|++=
T Consensus 168 ~AGIDIGdTlIG 179 (235)
T 1v8d_A 168 HGGMDIGGVLIG 179 (235)
T ss_dssp SEEEEESSCCCG
T ss_pred cCCcccccceee
Confidence 899999999974
No 101
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=21.74 E-value=72 Score=29.52 Aligned_cols=41 Identities=20% Similarity=0.394 Sum_probs=28.3
Q ss_pred CceecCCchh--hchHHHHHHhCCccceechhhhhhhhHHHHH
Q 027043 84 NLHLAGGGAY--KFADLIKEKLGVVLDKEDEMDCLVTGANFLL 124 (229)
Q Consensus 84 ~i~~TGGGA~--k~~~~~~~~lg~~~~k~dEm~~li~G~~fLl 124 (229)
.|.++||||. -+-.++.+.+|+++.....-++-..|.-.+.
T Consensus 404 ~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA 446 (510)
T 2p3r_A 404 ALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLA 446 (510)
T ss_dssp EEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHH
T ss_pred EEEEeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHH
Confidence 3678999983 5566677889999876665555555655554
Done!