Your job contains 1 sequence.
>027050
MEKVMNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLS
SAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLM
KAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETAA
QLPEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027050
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172686 - symbol:VPS24.1 species:3702 "Arabido... 927 4.3e-93 1
TAIR|locus:2075924 - symbol:VPS24.2 species:3702 "Arabido... 649 1.2e-63 1
MGI|MGI:1913950 - symbol:Chmp3 "charged multivesicular bo... 430 2.0e-40 1
RGD|708556 - symbol:Chmp3 "charged multivesicular body pr... 428 3.3e-40 1
UNIPROTKB|E1C230 - symbol:VPS24 "Uncharacterized protein"... 424 8.7e-40 1
UNIPROTKB|E2RDX0 - symbol:CHMP3 "Uncharacterized protein"... 420 2.3e-39 1
UNIPROTKB|I3LFQ9 - symbol:CHMP3 "Uncharacterized protein"... 419 2.9e-39 1
ZFIN|ZDB-GENE-040426-2600 - symbol:chmp3 "charged multive... 419 2.9e-39 1
UNIPROTKB|Q58CS7 - symbol:CHMP3 "Charged multivesicular b... 416 6.1e-39 1
UNIPROTKB|Q9Y3E7 - symbol:CHMP3 "Charged multivesicular b... 415 7.8e-39 1
UNIPROTKB|F1SVC7 - symbol:CHMP3 "Uncharacterized protein"... 407 5.5e-38 1
FB|FBgn0037231 - symbol:vps24 "Charged multivesicular bod... 401 2.4e-37 1
DICTYBASE|DDB_G0284769 - symbol:vps24 "SNF7 family protei... 355 1.8e-32 1
WB|WBGene00020866 - symbol:T27F7.1 species:6239 "Caenorha... 337 1.4e-30 1
UNIPROTKB|G4MKS3 - symbol:MGG_06670 "Charged multivesicul... 291 1.1e-25 1
ASPGD|ASPL0000002845 - symbol:vps24 species:162425 "Emeri... 268 2.9e-23 1
POMBASE|SPAC9E9.14 - symbol:vps24 "ESCRT III complex subu... 257 4.3e-22 1
TAIR|locus:2024107 - symbol:VPS2.3 "vacuolar protein sort... 253 1.1e-21 1
SGD|S000001524 - symbol:VPS24 "Subunit of the ESCRT-III c... 251 1.9e-21 1
TAIR|locus:2054612 - symbol:VPS2.1 species:3702 "Arabidop... 241 2.1e-20 1
TAIR|locus:2163396 - symbol:VPS2.2 species:3702 "Arabidop... 235 9.2e-20 1
CGD|CAL0003689 - symbol:VPS2 species:5476 "Candida albica... 230 3.1e-19 1
UNIPROTKB|Q5A501 - symbol:VPS2 "Putative uncharacterized ... 230 3.1e-19 1
UNIPROTKB|F1NR65 - symbol:CHMP2B "Charged multivesicular ... 228 5.1e-19 1
DICTYBASE|DDB_G0292400 - symbol:vps2B "SNF7 family protei... 226 8.3e-19 1
UNIPROTKB|Q5F3A2 - symbol:CHMP2B "Charged multivesicular ... 225 1.1e-18 1
UNIPROTKB|F1MKH9 - symbol:F1MKH9 "Uncharacterized protein... 219 4.6e-18 1
FB|FBgn0039402 - symbol:vps2 "vps2" species:7227 "Drosoph... 214 1.6e-17 1
WB|WBGene00007216 - symbol:C01A2.4 species:6239 "Caenorha... 212 2.5e-17 1
UNIPROTKB|Q9UQN3 - symbol:CHMP2B "Charged multivesicular ... 209 5.3e-17 1
ZFIN|ZDB-GENE-040426-2539 - symbol:chmp2bb "chromatin mod... 207 8.6e-17 1
UNIPROTKB|E2R417 - symbol:CHMP2B "Uncharacterized protein... 206 1.1e-16 1
UNIPROTKB|F2Z5Q1 - symbol:CHMP2B "Uncharacterized protein... 206 1.1e-16 1
MGI|MGI:1916192 - symbol:Chmp2b "charged multivesicular b... 206 1.1e-16 1
WB|WBGene00012903 - symbol:vps-2 species:6239 "Caenorhabd... 206 1.1e-16 1
ZFIN|ZDB-GENE-070628-3 - symbol:chmp2ba "chromatin modify... 206 1.1e-16 1
UNIPROTKB|Q5ZHN1 - symbol:CHMP2A "Charged multivesicular ... 203 2.3e-16 1
UNIPROTKB|Q3SX42 - symbol:CHMP2B "Charged multivesicular ... 203 2.3e-16 1
ZFIN|ZDB-GENE-040426-2922 - symbol:bc2 "putative breast a... 200 4.7e-16 1
UNIPROTKB|E2RIU2 - symbol:CHMP2A "Uncharacterized protein... 199 6.0e-16 1
UNIPROTKB|O43633 - symbol:CHMP2A "Charged multivesicular ... 199 6.0e-16 1
SGD|S000001485 - symbol:DID4 "Class E Vps protein of the ... 197 9.8e-16 1
MGI|MGI:1916203 - symbol:Chmp2a "charged multivesicular b... 195 1.6e-15 1
RGD|1305050 - symbol:Chmp2a "charged multivesicular body ... 195 1.6e-15 1
UNIPROTKB|Q3T0U5 - symbol:CHMP2A "Chromatin modifying pro... 194 2.0e-15 1
FB|FBgn0035589 - symbol:CHMP2B "Charged multivesicular bo... 192 3.3e-15 1
ASPGD|ASPL0000001940 - symbol:AN6898 species:162425 "Emer... 186 1.4e-14 1
POMBASE|SPAC4F8.01 - symbol:did4 "ESCRT III complex subun... 162 5.0e-12 1
DICTYBASE|DDB_G0290087 - symbol:vps2A "SNF7 family protei... 149 2.4e-10 1
UNIPROTKB|C9J0A7 - symbol:CHMP2B "Charged multivesicular ... 133 1.4e-08 1
RGD|1306781 - symbol:Chmp2b "charged multivesicular body ... 118 4.1e-07 1
UNIPROTKB|I3LSS2 - symbol:CHMP2A "Uncharacterized protein... 120 9.5e-07 1
TAIR|locus:2007883 - symbol:VPS46.1 "vacuolar protein sor... 120 9.5e-06 1
UNIPROTKB|P0C149 - symbol:SNF7 "Vacuolar-sorting protein ... 119 2.0e-05 1
TAIR|locus:2032607 - symbol:VPS46.2 species:3702 "Arabido... 113 7.5e-05 1
FB|FBgn0036805 - symbol:Chmp1 "Chmp1" species:7227 "Droso... 108 0.00032 1
ASPGD|ASPL0000059049 - symbol:AN0166 species:162425 "Emer... 107 0.00055 2
>TAIR|locus:2172686 [details] [associations]
symbol:VPS24.1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AB005243
EMBL:AY054614 EMBL:AY128742 EMBL:AF083749 EMBL:AK220831
IPI:IPI00546218 RefSeq:NP_197686.1 UniGene:At.8736
ProteinModelPortal:Q9FFB3 SMR:Q9FFB3 IntAct:Q9FFB3 STRING:Q9FFB3
PaxDb:Q9FFB3 PRIDE:Q9FFB3 EnsemblPlants:AT5G22950.1 GeneID:832359
KEGG:ath:AT5G22950 TAIR:At5g22950 InParanoid:Q9FFB3 OMA:MKIVNNL
PhylomeDB:Q9FFB3 ProtClustDB:CLSN2686097 Genevestigator:Q9FFB3
Uniprot:Q9FFB3
Length = 229
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 185/229 (80%), Positives = 210/229 (91%)
Query: 1 MEKVMNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLS 60
ME+VMN+IKPKP+P+QLLRDWQRKLRQECRNIERQIRDIQ+EE+NVQKAIK+AAKRND+
Sbjct: 1 MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60
Query: 61 SAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLM 120
SAK+LA+E+V SR+TVNRLYENKAQMNSISMHLGESVAIARTVGHL+KSAEVMKLVNNLM
Sbjct: 61 SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
Query: 121 KAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAA 180
KAP++AATMQEFSKEMTKAGVIEEFVN+A+D ALDS VDKVLTAIAGETAA
Sbjct: 121 KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA 180
Query: 181 QLPEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+LP AVRKER+K AQ + ++EE+AVAEG+DDE+ELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229
>TAIR|locus:2075924 [details] [associations]
symbol:VPS24.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0000815
"ESCRT III complex" evidence=ISS] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AL353992
IPI:IPI00548688 PIR:T48976 RefSeq:NP_190086.1 UniGene:At.53746
ProteinModelPortal:Q9LXH5 SMR:Q9LXH5 EnsemblPlants:AT3G45000.1
GeneID:823635 KEGG:ath:AT3G45000 TAIR:At3g45000 InParanoid:Q9LXH5
OMA:AFSKEMT PhylomeDB:Q9LXH5 ArrayExpress:Q9LXH5
Genevestigator:Q9LXH5 Uniprot:Q9LXH5
Length = 200
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 134/198 (67%), Positives = 159/198 (80%)
Query: 32 IERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSRKTVNRLYENKAQMNSISM 91
I+ + DI+REE+NV KAIKD+ KRNDL +AK+LA+E+V SR+TV RLYENKAQ+NSISM
Sbjct: 3 IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISM 62
Query: 92 HLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVD 151
HLGES+A A TVG+L+KS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEEFV+DAVD
Sbjct: 63 HLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVD 122
Query: 152 TALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRAAQEEDAVAEGI 211
ALDS VDKVLTAIAGETAA+LPEAVRK+++ AQ + EDA+ EG+
Sbjct: 123 NALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGV 182
Query: 212 DDEKELEEIRARLAKVRS 229
D E+ELE IR RLA VRS
Sbjct: 183 DAEEELEAIRYRLANVRS 200
>MGI|MGI:1913950 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005770 "late endosome" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0051036 "regulation of endosome size" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1913950 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:AK009414 EMBL:AK014818 EMBL:AK016677 EMBL:AK018611
EMBL:AK083562 EMBL:BC049964 IPI:IPI00347275 RefSeq:NP_080059.2
UniGene:Mm.181278 ProteinModelPortal:Q9CQ10 SMR:Q9CQ10
IntAct:Q9CQ10 STRING:Q9CQ10 PhosphoSite:Q9CQ10 PaxDb:Q9CQ10
PRIDE:Q9CQ10 Ensembl:ENSMUST00000059462 Ensembl:ENSMUST00000065364
GeneID:66700 KEGG:mmu:66700 UCSC:uc009cgw.1 InParanoid:Q9CQ10
NextBio:322405 Bgee:Q9CQ10 CleanEx:MM_VPS24 Genevestigator:Q9CQ10
GermOnline:ENSMUSG00000053119 Uniprot:Q9CQ10
Length = 224
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 90/219 (41%), Positives = 136/219 (62%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 10 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +D++L I + P V
Sbjct: 129 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDAL 188
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA EE E +DE++LE +++RLA +RS
Sbjct: 189 PEPEPAGAMAASEE---GEEEEDEEDLEAMQSRLATLRS 224
>RGD|708556 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IMP]
[GO:0005769 "early endosome" evidence=IDA] [GO:0005770 "late
endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030496 "midbody" evidence=IDA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0051036 "regulation of
endosome size" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
RGD:708556 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0005770
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 GO:GO:0000815
eggNOG:COG5491 CTD:51652 GeneTree:ENSGT00550000074896
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AY150169 IPI:IPI00192445 RefSeq:NP_758834.1
UniGene:Rn.162751 ProteinModelPortal:Q8CGS4 SMR:Q8CGS4
STRING:Q8CGS4 PhosphoSite:Q8CGS4 Ensembl:ENSRNOT00000010253
GeneID:282834 KEGG:rno:282834 UCSC:RGD:708556 InParanoid:Q8CGS4
NextBio:624897 Genevestigator:Q8CGS4 GermOnline:ENSRNOG00000007356
Uniprot:Q8CGS4
Length = 223
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 90/219 (41%), Positives = 135/219 (61%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 10 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +D++L I + P V
Sbjct: 129 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDAL 188
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA E D DDE++LE +++RLA +RS
Sbjct: 189 PEPEPAGAMAASEGDEE----DDEEDLEAMQSRLATLRS 223
>UNIPROTKB|E1C230 [details] [associations]
symbol:VPS24 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK CTD:40542
EMBL:AADN02014773 IPI:IPI00579079 RefSeq:XP_420858.2
UniGene:Gga.12935 Ensembl:ENSGALT00000025484 GeneID:422918
KEGG:gga:422918 NextBio:20825474 Uniprot:E1C230
Length = 218
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 90/220 (40%), Positives = 135/220 (61%)
Query: 10 PKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQEL 69
P+ P++L+ +W K+R+E R I+RQIRDIQREE+ V+++IKDAAK+ LA+EL
Sbjct: 8 PEKPPKELVNEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCVILAKEL 67
Query: 70 VRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATM 129
+RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM
Sbjct: 68 IRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATM 127
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKE 189
+E SKEM KAG+IEE + D ++ D +DK+L I + P V
Sbjct: 128 RELSKEMMKAGIIEEMLEDTFESMEDEEEMEEEAEMEIDKILFEITAGALGKAPSKVTDA 187
Query: 190 RVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ A + AA +D+E+++E +++RLA +RS
Sbjct: 188 LPEPEAMGAAAA---------VDEEEDIEAMQSRLATLRS 218
>UNIPROTKB|E2RDX0 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 OMA:NIDRQIR EMBL:AAEX03010929
Ensembl:ENSCAFT00000011979 NextBio:20851539 Uniprot:E2RDX0
Length = 292
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 88/219 (40%), Positives = 135/219 (61%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 81 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMI 139
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 140 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 199
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +DK+L I + P V
Sbjct: 200 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDAL 259
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA E++ ++E+ LE +++RLA +RS
Sbjct: 260 PEPEPSGAMAASEDE------EEEEALEAMQSRLATLRS 292
>UNIPROTKB|I3LFQ9 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:CU467088
RefSeq:XP_003354782.1 Ensembl:ENSSSCT00000031530 GeneID:100522249
KEGG:ssc:100522249 Uniprot:I3LFQ9
Length = 221
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 88/219 (40%), Positives = 135/219 (61%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 10 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +DK+L I + P V
Sbjct: 129 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDAL 188
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA E++ ++E+ LE +++RLA +RS
Sbjct: 189 PEPEPPGAMAASEDE------EEEEALEAMQSRLATLRS 221
>ZFIN|ZDB-GENE-040426-2600 [details] [associations]
symbol:chmp3 "charged multivesicular body protein
3" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2600
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:BC066696 IPI:IPI00491816 RefSeq:NP_998485.1 UniGene:Dr.48763
ProteinModelPortal:Q6NY88 SMR:Q6NY88 STRING:Q6NY88 PRIDE:Q6NY88
Ensembl:ENSDART00000055487 GeneID:406621 KEGG:dre:406621
InParanoid:Q6NY88 NextBio:20818164 Bgee:Q6NY88 Uniprot:Q6NY88
Length = 221
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 89/219 (40%), Positives = 139/219 (63%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P+ L+ +W K+R+E R I+RQIRDIQREE+ V+++IKDAAK+ LA+E++
Sbjct: 10 KP-PKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCIILAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
+S++ +N+LY +KAQMNS+ + + +++ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 QSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
+ SKEM KAG+IEE + D ++ D VDK+L I + P V +
Sbjct: 129 DLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGALGKAPSKVT-DL 187
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
A + AA EE++ ++E+E+EE+++RLA +RS
Sbjct: 188 PDPVAIGATAAPEEES-----EEEEEIEEMQSRLAALRS 221
>UNIPROTKB|Q58CS7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491
EMBL:BT021870 EMBL:BC114072 IPI:IPI00688889 RefSeq:NP_001030223.2
UniGene:Bt.28232 ProteinModelPortal:Q58CS7 SMR:Q58CS7 STRING:Q58CS7
Ensembl:ENSBTAT00000018071 GeneID:507722 KEGG:bta:507722 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 InParanoid:Q58CS7 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB NextBio:20868194 Uniprot:Q58CS7
Length = 222
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 87/219 (39%), Positives = 135/219 (61%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 10 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +D++L I + P V
Sbjct: 129 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDAL 188
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA E++ ++E+ LE +++RLA +RS
Sbjct: 189 PEPEPLGAMAASEDEE-----EEEEALEAMQSRLATLRS 222
>UNIPROTKB|Q9Y3E7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0006915 EMBL:CH471053 GO:GO:0031902 GO:GO:0015031
GO:GO:0016197 GO:GO:0007049 GO:GO:0000910 GO:GO:0005546
GO:GO:0008333 GO:GO:0030496 GO:GO:0005769 GO:GO:0051036
GO:GO:0016044 EMBL:AC064848 eggNOG:COG5491 CTD:51652
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AF219226 EMBL:AY364249 EMBL:AF151907
EMBL:AK290725 EMBL:AK294389 EMBL:AK312353 EMBL:AK315835
EMBL:AC015971 EMBL:AC068288 EMBL:BC004419 IPI:IPI00100673
IPI:IPI00478935 IPI:IPI00979305 IPI:IPI00981241
RefSeq:NP_001005753.1 RefSeq:NP_001180446.1 RefSeq:NP_001185883.1
RefSeq:NP_057163.1 UniGene:Hs.591582 PDB:2GD5 PDB:2XZE PDB:3FRT
PDB:3FRV PDBsum:2GD5 PDBsum:2XZE PDBsum:3FRT PDBsum:3FRV
ProteinModelPortal:Q9Y3E7 SMR:Q9Y3E7 DIP:DIP-48532N IntAct:Q9Y3E7
MINT:MINT-1185988 STRING:Q9Y3E7 PhosphoSite:Q9Y3E7 DMDM:73917763
PaxDb:Q9Y3E7 PRIDE:Q9Y3E7 DNASU:51652 Ensembl:ENST00000263856
Ensembl:ENST00000409225 Ensembl:ENST00000409727
Ensembl:ENST00000439940 GeneID:100526767 GeneID:51652
KEGG:hsa:100526767 KEGG:hsa:51652 UCSC:uc002srj.3 CTD:100526767
GeneCards:GC02M086730 HGNC:HGNC:29865 HPA:HPA015673 MIM:610052
neXtProt:NX_Q9Y3E7 PharmGKB:PA134920495 PhylomeDB:Q9Y3E7
ChiTaRS:CHMP3 EvolutionaryTrace:Q9Y3E7 NextBio:55614 Bgee:Q9Y3E7
CleanEx:HS_VPS24 Genevestigator:Q9Y3E7 GermOnline:ENSG00000115561
Uniprot:Q9Y3E7
Length = 222
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 87/219 (39%), Positives = 135/219 (61%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++
Sbjct: 10 KP-PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMI 68
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+
Sbjct: 69 RSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMR 128
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
E SKEM KAG+IEE + D ++ D +D++L I + P V
Sbjct: 129 ELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDAL 188
Query: 191 VKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ + AA E++ ++E+ LE +++RLA +RS
Sbjct: 189 PEPEPPGAMAASEDEE-----EEEEALEAMQSRLATLRS 222
>UNIPROTKB|F1SVC7 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:CU467088
Ensembl:ENSSSCT00000009004 Uniprot:F1SVC7
Length = 217
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 85/217 (39%), Positives = 131/217 (60%)
Query: 13 NPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRS 72
+P + +W K+R+E R ++RQIRDIQREE+ V++++KDAAK+ LA+E++RS
Sbjct: 7 SPMTQVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRS 66
Query: 73 RKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEF 132
RK V++LY +KA MNS+ M + +A+ R G L KS EVMK + +L+K PE+ ATM+E
Sbjct: 67 RKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMREL 126
Query: 133 SKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVK 192
SKEM KAG+IEE + D ++ D +DK+L I + P V +
Sbjct: 127 SKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPE 186
Query: 193 QSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
+ AA E++ ++E+ LE +++RLA +RS
Sbjct: 187 PEPPGAMAASEDE------EEEEALEAMQSRLATLRS 217
>FB|FBgn0037231 [details] [associations]
symbol:vps24 "Charged multivesicular body protein 3"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 EMBL:AE014297
GO:GO:0006911 GO:GO:0015031 eggNOG:COG5491
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:AY058381
RefSeq:NP_649451.1 UniGene:Dm.20141 SMR:Q9VN02 IntAct:Q9VN02
MINT:MINT-896357 STRING:Q9VN02 EnsemblMetazoa:FBtr0078958
GeneID:40542 KEGG:dme:Dmel_CG9779 UCSC:CG9779-RA CTD:40542
FlyBase:FBgn0037231 InParanoid:Q9VN02 OrthoDB:EOG4Z614S
GenomeRNAi:40542 NextBio:819274 Uniprot:Q9VN02
Length = 223
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 88/224 (39%), Positives = 143/224 (63%)
Query: 10 PKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQEL 69
P +P++ +++W K+R+E ++RQIR IQREE+ V++++K AA++ND + LA+E+
Sbjct: 8 PSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVILAKEI 67
Query: 70 VRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATM 129
V +RK +NR+Y +KA +NSI M + ++ R G L KS EV++ + +L++ PE+A M
Sbjct: 68 VNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPELAGIM 127
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA-GETA-AQLP-EAV 186
++ SKEM KAG+IEE +++ +D+ +S VDKVL I G+ A LP EA
Sbjct: 128 RDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEITDGKLGEAPLPPEAT 187
Query: 187 RKERVKQSAQTSRAAQEEDAVAEGIDDE-KELEEIRARLAKVRS 229
+ K SA +R E+D D+E +EL+E+++RLA +RS
Sbjct: 188 PAD--KASASAARVEAEQD------DEEGEELQEMQSRLASLRS 223
>DICTYBASE|DDB_G0284769 [details] [associations]
symbol:vps24 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0284769 GenomeReviews:CM000153_GR EMBL:AAFI02000071
GO:GO:0015031 GO:GO:0000815 eggNOG:COG5491 KO:K12193 OMA:MSKEMMK
RefSeq:XP_638395.1 ProteinModelPortal:Q54P63 STRING:Q54P63
PRIDE:Q54P63 EnsemblProtists:DDB0234036 GeneID:8624764
KEGG:ddi:DDB_G0284769 InParanoid:Q54P63 ProtClustDB:CLSZ2437297
Uniprot:Q54P63
Length = 207
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 74/189 (39%), Positives = 115/189 (60%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L++ W+R+LR+E R ++ Q+R I +EK + IK+ K D SAK+LA+E+V
Sbjct: 7 KPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTLAKEIV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
SRK R+Y KAQMNS+SM L ++A+ + G+L KS E+MK++N+L+K PE+ M
Sbjct: 67 NSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKSTEIMKMMNDLIKLPELNKVMM 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAI--AGETAAQLP-EAVR 187
EMTKAG++EE ++D D + V+K++ I +G + P E +
Sbjct: 127 AMGSEMTKAGIMEEMISDVFD--MQGEDLEEEAEMEVNKIMDEILVSGPQVSSAPLETHQ 184
Query: 188 KERVKQSAQ 196
+E V Q Q
Sbjct: 185 QEEVVQEKQ 193
>WB|WBGene00020866 [details] [associations]
symbol:T27F7.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0015031
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0019915
eggNOG:COG5491 GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
KO:K12193 OMA:MSKEMMK EMBL:FO081509 NextBio:881441
RefSeq:NP_494919.1 ProteinModelPortal:Q9GYK4 SMR:Q9GYK4
IntAct:Q9GYK4 STRING:Q9GYK4 PaxDb:Q9GYK4 EnsemblMetazoa:T27F7.1.1
EnsemblMetazoa:T27F7.1.2 EnsemblMetazoa:T27F7.1.3 GeneID:173863
KEGG:cel:CELE_T27F7.1 UCSC:T27F7.1.1 CTD:173863 WormBase:T27F7.1
InParanoid:Q9GYK4 Uniprot:Q9GYK4
Length = 208
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/183 (37%), Positives = 113/183 (61%)
Query: 5 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKS 64
M + K +P++ +R+ QRK+RQE R+++RQ+ IQREE+ V K IK+AAK+ D
Sbjct: 1 MGLFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLI 60
Query: 65 LAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPE 124
LA+ +++SRK +++++ +KAQ+NS+ M + E +A R G L KS EVMK + L+K PE
Sbjct: 61 LAKSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPE 120
Query: 125 VAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPE 184
+ TM+E S EM K G+IEE + + +++ ++ V+ +L + + P
Sbjct: 121 IMKTMREMSAEMMKLGIIEEMIEETLES-VEPAGLEEKAQEEVENILWEVTQGELGKAPL 179
Query: 185 AVR 187
AV+
Sbjct: 180 AVK 182
>UNIPROTKB|G4MKS3 [details] [associations]
symbol:MGG_06670 "Charged multivesicular body protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:CM001231 KO:K12193 RefSeq:XP_003709375.1
ProteinModelPortal:G4MKS3 EnsemblFungi:MGG_06670T0 GeneID:2684843
KEGG:mgr:MGG_06670 Uniprot:G4MKS3
Length = 234
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/237 (34%), Positives = 127/237 (53%)
Query: 1 MEKVMNMIKPKPNPQQLLRDWQRKLRQECRNIER---QIRDIQREEKNVQKAIKDAAKRN 57
ME + ++ KP+PQ +R +RQ R ++R Q++ ++ + KN+ A A RN
Sbjct: 1 METLKSLFV-KPDPQAQMRKCNAMIRQNIRKLDRDIAQVKQVETKTKNLIVAADKRAARN 59
Query: 58 DLSSA------KSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAE 111
+A ++ A+ELVR+RKT RL +KAQ++S+ M + E+ A+ + G + S
Sbjct: 60 PAQAAQAQKEVRAFARELVRARKTSARLVTSKAQLSSVQMQVNEAFAVRKIEGSIRASVG 119
Query: 112 VMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXX--VDK 169
VM+ VN+L++ PE+A TMQ+ S E+ KAG+IEE V ++ A D+ VDK
Sbjct: 120 VMREVNSLVRLPELAGTMQQLSVELMKAGIIEEMVQESFPEA-DALAEYEEEAGEGEVDK 178
Query: 170 VLTAIAG---ETAAQLPEA-VRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRA 222
VL I ET +LP A V +E + AQ +EED A LE +R+
Sbjct: 179 VLGEILKDKTETTGKLPTAPVSQEPIPAKAQEDEE-EEEDTQAMMDQMRNRLEALRS 234
>ASPGD|ASPL0000002845 [details] [associations]
symbol:vps24 species:162425 "Emericella nidulans"
[GO:0071467 "cellular response to pH" evidence=IMP;IPI] [GO:0043936
"asexual sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0030448 "hyphal growth" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 EMBL:BN001301 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 OMA:MSKEMMK EMBL:AACD01000115
OrthoDB:EOG4F7RVD RefSeq:XP_664524.1 ProteinModelPortal:Q5AXR0
STRING:Q5AXR0 EnsemblFungi:CADANIAT00007726 GeneID:2870630
KEGG:ani:AN6920.2 Uniprot:Q5AXR0
Length = 228
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 72/227 (31%), Positives = 119/227 (52%)
Query: 12 PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLS---------SA 62
P+PQ +R + +R R ++R I ++ + ++ I +A+KR + A
Sbjct: 11 PDPQTQMRKCNQLIRANTRQLDRDIAQLKALDGKTRQTIVNASKRAQRNPARAKQANLEA 70
Query: 63 KSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKA 122
K LA+ELVR R+ RL ++AQ+ S+ M + E+ A+ + G L KS +MK VN L++
Sbjct: 71 KMLARELVRVRRQTTRLTTSRAQLQSVQMQVNEAFAVRKIQGSLQKSTGIMKDVNTLIRL 130
Query: 123 PEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQL 182
P+++ATM + + E+ +AG+IEE V+DA+ VDK+L I +Q+
Sbjct: 131 PQLSATMHQLATELVRAGIIEEMVDDAIPNNELLEDEEAEADEEVDKILQEILQGKLSQV 190
Query: 183 PEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
E V+ ER + Q A+EE D E L ++R RL ++S
Sbjct: 191 DE-VKPERPLEEPQQ---AEEEFE-----DQEAALAQMRGRLEALKS 228
>POMBASE|SPAC9E9.14 [details] [associations]
symbol:vps24 "ESCRT III complex subunit Vps24"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006900 "membrane budding" evidence=IC]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IMP] [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
PomBase:SPAC9E9.14 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0012505 GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 GO:GO:0006900 OMA:MKIVNNL PIR:T39221
RefSeq:NP_594587.1 ProteinModelPortal:O14296 STRING:O14296
EnsemblFungi:SPAC9E9.14.1 GeneID:2542234 KEGG:spo:SPAC9E9.14
OrthoDB:EOG4F7RVD NextBio:20803301 Uniprot:O14296
Length = 231
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 63/224 (28%), Positives = 126/224 (56%)
Query: 12 PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVR 71
P PQ+ R WQ +R+E R ++RQ+ ++ K + +K AK++D+++ + LA+E+ R
Sbjct: 11 PTPQEQNRKWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRILAKEIAR 70
Query: 72 SRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQE 131
+ + RL E+KA + S+S+ L + +A+ + G + S ++M+ V++L++ P+++ TM+
Sbjct: 71 ANRHGKRLAESKALLGSLSLQLNDQMAMLKIQGTMQSSTKIMQDVSSLIRLPQLSETMRN 130
Query: 132 FSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXX--VDKVLTA--IAGETAAQLPEAV- 186
S E+TKAGV+EE ++ D V ++LT + + + +A
Sbjct: 131 LSMELTKAGVLEEMRDEMFLPVEDDEELMDLADEDEEVQEILTKYNVIPAPSEKAADAAT 190
Query: 187 -RKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVRS 229
R++ +KQ+ + +D+ ID+E +L +IR +L ++S
Sbjct: 191 HREQSLKQALPSLSNGIAKDSTE--IDEE-QLLDIRDKLDALKS 231
>TAIR|locus:2024107 [details] [associations]
symbol:VPS2.3 "vacuolar protein sorting-associated
protein 2.3" species:3702 "Arabidopsis thaliana" [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003027 GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12192 OMA:DPQKTLK
EMBL:AY052238 EMBL:AY060501 IPI:IPI00517467 PIR:D86170
RefSeq:NP_563696.1 UniGene:At.26425 ProteinModelPortal:Q941D5
SMR:Q941D5 IntAct:Q941D5 PRIDE:Q941D5 EnsemblPlants:AT1G03950.1
GeneID:839362 KEGG:ath:AT1G03950 TAIR:At1g03950 InParanoid:Q941D5
PhylomeDB:Q941D5 ProtClustDB:CLSN2687652 Genevestigator:Q941D5
Uniprot:Q941D5
Length = 210
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 65/218 (29%), Positives = 112/218 (51%)
Query: 5 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKS 64
MN+ KPNP+++LR+ +R++ Q R IE++I +Q EEK + IK AK + + K
Sbjct: 1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60
Query: 65 LAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPE 124
LA++L+R R+ + L ++AQM I+ H A + + + M ++ M +
Sbjct: 61 LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAK 120
Query: 125 VAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPE 184
A M+EF K+ + + E ++D++D ALD+ ++VL I + A+QL
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180
Query: 185 AVRKERVKQSAQTSRAAQEEDAVAEGIDD-EKELEEIR 221
A + + + A ED + GID+ EK L +R
Sbjct: 181 APKGKIGGKKA--------EDVGSSGIDELEKRLAALR 210
>SGD|S000001524 [details] [associations]
symbol:VPS24 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815
"ESCRT III complex" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0070676 "intralumenal vesicle formation" evidence=IMP]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
SGD:S000001524 GO:GO:0015031 GO:GO:0012505 EMBL:BK006944
GO:GO:0045324 GO:GO:0000815 EMBL:X71621 eggNOG:COG5491
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219 KO:K12193
GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4F7RVD EMBL:Z28041
EMBL:AY557901 PIR:S37862 RefSeq:NP_012883.1
ProteinModelPortal:P36095 SMR:P36095 DIP:DIP-7295N IntAct:P36095
MINT:MINT-468346 STRING:P36095 PaxDb:P36095 EnsemblFungi:YKL041W
GeneID:853825 KEGG:sce:YKL041W CYGD:YKL041w OMA:NIDRQIR
NextBio:975014 Genevestigator:P36095 GermOnline:YKL041W
Uniprot:P36095
Length = 224
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 63/222 (28%), Positives = 122/222 (54%)
Query: 12 PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVR 71
P+P++ R + LR+ RNIE+ +R++ + Q+ IK +AK+ND+ + + A+EL +
Sbjct: 11 PDPKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQ 70
Query: 72 SRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQE 131
K +R+Y ++AQ++S+ M + E++ + + SA +M+ VN+L++ P++ TM E
Sbjct: 71 INKQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIE 130
Query: 132 FSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERV 191
KE+ K+G+I E V+D +++ D VD+ + I + + + + V
Sbjct: 131 LEKELMKSGIISEMVDDTMESVGD---VGEEMDEAVDEEVNKIVEQYTNE-----KFKNV 182
Query: 192 KQSAQTSRAAQEEDAVA--EGIDDEKE--LEEIRARLAKVRS 229
Q AA EE+ E +D+E + + E+R RL +++
Sbjct: 183 DQVPTVELAANEEEQEIPDEKVDEEADRMVNEMRERLRALQN 224
>TAIR|locus:2054612 [details] [associations]
symbol:VPS2.1 species:3702 "Arabidopsis thaliana"
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005771 "multivesicular body" evidence=IDA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0005771 GO:GO:0000815
eggNOG:COG5491 KO:K12191 OMA:MEWLFGK EMBL:AC006420 EMBL:AY090953
EMBL:AY088685 EMBL:AJ628449 EMBL:AJ628450 EMBL:AJ628451
EMBL:AJ628452 EMBL:AJ628453 EMBL:AJ628454 EMBL:AJ628455
EMBL:AJ628456 EMBL:AJ628457 EMBL:AJ628458 EMBL:AJ628459
EMBL:AJ628460 EMBL:AJ628461 EMBL:AJ628462 EMBL:AJ628463
EMBL:AJ628464 EMBL:AJ628465 EMBL:AJ628466 EMBL:AJ628467
EMBL:AJ628468 EMBL:AJ628469 EMBL:AJ628470 EMBL:AJ628471
EMBL:AJ628472 EMBL:AJ628473 EMBL:AJ628474 EMBL:AJ628475
EMBL:AJ628476 EMBL:AJ628477 EMBL:AJ628478 EMBL:AJ628479
EMBL:AJ628480 EMBL:AJ628481 EMBL:AJ628482 EMBL:AJ628483
EMBL:AJ628484 EMBL:AJ628485 EMBL:AJ628486 EMBL:AJ628487
EMBL:AJ628488 EMBL:AJ628489 EMBL:AJ628490 EMBL:AJ628491
EMBL:AJ628492 EMBL:AJ628493 EMBL:AJ628494 EMBL:AJ628495
EMBL:AJ628496 EMBL:AJ628497 EMBL:AJ628498 EMBL:AJ628499
EMBL:AJ628500 EMBL:AJ628501 EMBL:AJ628502 EMBL:AJ628503
EMBL:AJ628504 EMBL:AJ628505 EMBL:AJ628506 EMBL:AJ628507
EMBL:AJ628508 EMBL:AJ628509 EMBL:AJ628510 EMBL:AJ628511
EMBL:AJ628512 EMBL:AJ628513 EMBL:AJ628514 EMBL:AJ628515
EMBL:AJ628516 EMBL:AJ628517 EMBL:AJ628518 EMBL:AJ628519
EMBL:AJ628520 EMBL:AJ628521 EMBL:AJ628522 EMBL:AJ628523
EMBL:AJ628524 EMBL:AJ628525 EMBL:AJ628526 EMBL:AJ628527
EMBL:AJ628528 EMBL:AJ628529 EMBL:AJ628530 EMBL:AJ628531
EMBL:AJ628532 EMBL:AJ628533 EMBL:AJ628534 EMBL:AJ628535
EMBL:AJ628536 EMBL:AJ628537 EMBL:AJ628538 EMBL:AJ628539
EMBL:AJ628540 EMBL:AJ628541 EMBL:AJ628542 EMBL:AJ628543
EMBL:AJ628544 EMBL:AJ628545 EMBL:AJ628546 IPI:IPI00528753
PIR:D84478 RefSeq:NP_565336.1 UniGene:At.20774
ProteinModelPortal:Q9SKI2 SMR:Q9SKI2 IntAct:Q9SKI2 STRING:Q9SKI2
PaxDb:Q9SKI2 PRIDE:Q9SKI2 EnsemblPlants:AT2G06530.1 GeneID:815211
KEGG:ath:AT2G06530 TAIR:At2g06530 InParanoid:Q9SKI2
PhylomeDB:Q9SKI2 ProtClustDB:CLSN2688018 Genevestigator:Q9SKI2
Uniprot:Q9SKI2
Length = 225
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 64/228 (28%), Positives = 117/228 (51%)
Query: 4 VMNMIKPK-PNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSA 62
+MN I K P +LLR+ +R L + R IER+ + +Q +EK + IK AK+ + +
Sbjct: 1 MMNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAV 60
Query: 63 KSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMK 121
K +A++L+R+R + + Y+ K+Q+ +S+ + +++ + +G K + M +N M
Sbjct: 61 KVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMN 119
Query: 122 APEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQ 181
P + MQEF ++ K ++ E + DA+D AL+ V +VL I + +
Sbjct: 120 LPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQE 179
Query: 182 LPEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELE-EIRARLAKVR 228
L A V A ++ Q E A G +D ++ +++ARL +R
Sbjct: 180 LVNAP-SGAVAVPAAKNKVVQAE---ATGAEDSGGIDSDLQARLDNLR 223
>TAIR|locus:2163396 [details] [associations]
symbol:VPS2.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AB017065 EMBL:AB024024 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 EMBL:AK227410 EMBL:BT005848
IPI:IPI00548186 IPI:IPI00892046 RefSeq:NP_001119371.1
RefSeq:NP_199269.1 UniGene:At.30067 ProteinModelPortal:Q0WTY4
IntAct:Q0WTY4 STRING:Q0WTY4 PaxDb:Q0WTY4 PRIDE:Q0WTY4
EnsemblPlants:AT5G44560.1 GeneID:834483 KEGG:ath:AT5G44560
TAIR:At5g44560 InParanoid:Q0WTY4 OMA:APKGRIG PhylomeDB:Q0WTY4
ProtClustDB:CLSN2916725 Genevestigator:Q0WTY4 Uniprot:Q0WTY4
Length = 222
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 64/225 (28%), Positives = 108/225 (48%)
Query: 5 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKS 64
MN+ K K P+ LR +R++ R IER+I +Q EEK + IK AK + ++ K
Sbjct: 1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI 60
Query: 65 LAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPE 124
LA++LVR R+ + L ++AQ+ ++ H A + + + M +N M +
Sbjct: 61 LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 120
Query: 125 VAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPE 184
A +++F K+ + + E +++A+D LD ++VL I A+QL
Sbjct: 121 QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 180
Query: 185 AVRKERVKQSAQTSRAAQEEDAVAEGIDDEK-ELEEIRARLAKVR 228
A K R+ T AA A + E E++E+ RLA +R
Sbjct: 181 AP-KGRIA----TKTAAPPASTAATNKNSESSEVDELEKRLASLR 220
>CGD|CAL0003689 [details] [associations]
symbol:VPS2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0006623 "protein targeting to
vacuole" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689 GO:GO:0006623
EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 63/226 (27%), Positives = 115/226 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K PQ+ LR QR L + R + R+I +Q++EK + IK +AK +SSAK A++L+
Sbjct: 12 KLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAKDLI 71
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVG-HLNKSAEVMKLVNNLMKAPEVAATM 129
R++ V++ K Q+ +IS+ + +SV + + + + V+ +N M P+++
Sbjct: 72 RTKSYVSKFTSMKTQLQAISLRI-QSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSRIA 130
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQL------- 182
QEF+KE +EF++DA+D A+ VD++L+ + E L
Sbjct: 131 QEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLKDT 190
Query: 183 PEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVR 228
P + ++Q A +R A+ A D E ++++ARL ++
Sbjct: 191 PTGINAGNIEQ-ADRARVAEAVGANGASSHDADE-DDLQARLDSLK 234
>UNIPROTKB|Q5A501 [details] [associations]
symbol:VPS2 "Putative uncharacterized protein DID4"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689
GO:GO:0006623 EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 63/226 (27%), Positives = 115/226 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K PQ+ LR QR L + R + R+I +Q++EK + IK +AK +SSAK A++L+
Sbjct: 12 KLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAKDLI 71
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVG-HLNKSAEVMKLVNNLMKAPEVAATM 129
R++ V++ K Q+ +IS+ + +SV + + + + V+ +N M P+++
Sbjct: 72 RTKSYVSKFTSMKTQLQAISLRI-QSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSRIA 130
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQL------- 182
QEF+KE +EF++DA+D A+ VD++L+ + E L
Sbjct: 131 QEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLKDT 190
Query: 183 PEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIRARLAKVR 228
P + ++Q A +R A+ A D E ++++ARL ++
Sbjct: 191 PTGINAGNIEQ-ADRARVAEAVGANGASSHDADE-DDLQARLDSLK 234
>UNIPROTKB|F1NR65 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005739 GO:GO:0005634 GO:GO:0015031
GeneTree:ENSGT00550000074737 OMA:DPQKTLK IPI:IPI00591923
EMBL:AADN02042324 Ensembl:ENSGALT00000024990 Uniprot:F1NR65
Length = 214
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 58/199 (29%), Positives = 98/199 (49%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + K LA++LV
Sbjct: 7 KKTVDDIIKEQNRELRGTQRTITRDRAALEKQEKQLELEIKKMAKTGNKEACKVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
+ RK NR Y +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 QLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D+ V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAVAE 209
SA TS+A+ D E
Sbjct: 187 GLPSASTSKASTISDEEIE 205
>DICTYBASE|DDB_G0292400 [details] [associations]
symbol:vps2B "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0292400 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0010008 EMBL:AAFI02000190 eggNOG:COG5491 KO:K12191
OMA:MEWLFGK RefSeq:XP_629585.1 ProteinModelPortal:Q54DB1
STRING:Q54DB1 EnsemblProtists:DDB0234176 GeneID:8628645
KEGG:ddi:DDB_G0292400 ProtClustDB:CLSZ2429397 Uniprot:Q54DB1
Length = 198
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 51/182 (28%), Positives = 98/182 (53%)
Query: 5 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKS 64
M + + P+++LR+ QR L + R I+R+ +Q +EK + IK AK+ ++SAK
Sbjct: 1 MFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKI 60
Query: 65 LAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAP 123
+A++LVR+R + + YE K Q+ ++S+ + +++ + + K + M +N M P
Sbjct: 61 MAKDLVRTRYHIQKFYEMKTQLQAVSLRI-QTLQSTQAMAEAMKGVTKAMITMNRQMNLP 119
Query: 124 EVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLP 183
+ M EF ++ K + EE +ND +D ++ +++VL I + A+QL
Sbjct: 120 QFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLV 179
Query: 184 EA 185
+A
Sbjct: 180 DA 181
>UNIPROTKB|Q5F3A2 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628 KO:K12192
OrthoDB:EOG469QW1 EMBL:AJ851748 IPI:IPI00591923
RefSeq:NP_001025963.1 UniGene:Gga.9706 ProteinModelPortal:Q5F3A2
STRING:Q5F3A2 GeneID:418461 KEGG:gga:418461 InParanoid:Q5F3A2
NextBio:20821640 Uniprot:Q5F3A2
Length = 214
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/199 (28%), Positives = 98/199 (49%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++E+ ++ IK AK + + K LA++LV
Sbjct: 7 KKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
+ RK NR Y +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 QLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D+ V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAVAE 209
SA TS+A+ D E
Sbjct: 187 GLPSASTSKASTISDEEIE 205
>UNIPROTKB|F1MKH9 [details] [associations]
symbol:F1MKH9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:DAAA02033043 IPI:IPI00699405
Ensembl:ENSBTAT00000025656 Uniprot:F1MKH9
Length = 184
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 59/180 (32%), Positives = 99/180 (55%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
KP P++L+ +W K+R DI REE+ V++++ DAA+ + + LA+E+
Sbjct: 10 KP-PEELVSEWSLKIRN----------DIHREEEKVKQSMNDAARNDQKNVCMVLAKEM- 57
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RSRK +++L +KA MNS+ V TV L K+ EVMK V +L+K E+ AT+
Sbjct: 58 RSRKAMSKLCTSKAHMNSVLT----GVKNQPTVVLLQKNTEVMKAVQHLVKILEIQATVW 113
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA----GETAAQLPEAV 186
E SKE KAG+IE+ + D ++ + +D++L I G+ +++P+ +
Sbjct: 114 ELSKETMKAGIIEKILEDTFESMGNQEEMKEAAAIEIDRILFDITIGALGKAPSKVPDVL 173
>FB|FBgn0039402 [details] [associations]
symbol:vps2 "vps2" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014297 GO:GO:0015031 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 FlyBase:FBgn0039402 EMBL:BT003747
RefSeq:NP_651455.1 UniGene:Dm.10330 SMR:Q9VBI3 IntAct:Q9VBI3
MINT:MINT-1674416 STRING:Q9VBI3 EnsemblMetazoa:FBtr0084967
GeneID:43164 KEGG:dme:Dmel_CG14542 UCSC:CG14542-RA CTD:43164
InParanoid:Q9VBI3 GenomeRNAi:43164 NextBio:832507 Uniprot:Q9VBI3
Length = 256
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 54/204 (26%), Positives = 102/204 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K +P ++LR QR L + R+++R+ ++++EK + IK AK + + K +A++LV
Sbjct: 8 KISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVKIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ + KA + ++S+ + +++ T+ K + M+ +N + P++ +
Sbjct: 68 RTRRYAKKFMLMKANIQAVSLKI-QTLKSQNTMAQAMKGVTKAMQNMNRQLNLPQIQKIL 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAV 186
Q+F K+ + EE +NDA+D A++ V +VL + GE LP A
Sbjct: 127 QDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLGDLPSAS 186
Query: 187 RKERVKQSAQTSRAAQEEDAVAEG 210
+ A AQ+ AVA G
Sbjct: 187 GSLSIAGGA----GAQKAQAVAAG 206
>WB|WBGene00007216 [details] [associations]
symbol:C01A2.4 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 KO:K12192 EMBL:Z81029 PIR:T18795
RefSeq:NP_493357.2 ProteinModelPortal:O02208 SMR:O02208
IntAct:O02208 STRING:O02208 PaxDb:O02208 EnsemblMetazoa:C01A2.4.1
EnsemblMetazoa:C01A2.4.2 GeneID:182050 KEGG:cel:CELE_C01A2.4
UCSC:C01A2.4 CTD:182050 WormBase:C01A2.4 InParanoid:O02208
OMA:EVERNRT NextBio:916198 Uniprot:O02208
Length = 207
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 52/178 (29%), Positives = 94/178 (52%)
Query: 5 MNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKS 64
MN+ KP+P++L R +R+LR+ R++E R + R EK +++ IK A + +A+
Sbjct: 1 MNIFS-KPDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARH 59
Query: 65 LAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPE 124
LA++LV+ R + A+++ + ++A+ + + + MK +N M +
Sbjct: 60 LAKQLVQLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEK 119
Query: 125 VAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQL 182
VAA M+EF K G+ EE +ND +D+ LD+ V++VL I E ++L
Sbjct: 120 VAANMREFQMAQEKMGLTEEMMNDTLDSILDAPGDADEQDAIVNQVLDEIGIEMNSKL 177
>UNIPROTKB|Q9UQN3 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0016197 "endosomal transport" evidence=TAS] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0031902
GO:GO:0015031 GO:GO:0008219 GO:GO:0016197 Orphanet:803
GO:GO:0016044 HOGENOM:HOG000177218 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK EMBL:AF151842
EMBL:AL080122 EMBL:AK296072 EMBL:CR533456 EMBL:AK222654
EMBL:AC123511 EMBL:AC130885 EMBL:BC001553 IPI:IPI00550181
PIR:T12468 RefSeq:NP_001231573.1 RefSeq:NP_054762.2
UniGene:Hs.476930 PDB:2JQK PDBsum:2JQK ProteinModelPortal:Q9UQN3
SMR:Q9UQN3 IntAct:Q9UQN3 MINT:MINT-1430090 STRING:Q9UQN3
PhosphoSite:Q9UQN3 DMDM:73917746 PaxDb:Q9UQN3 PRIDE:Q9UQN3
DNASU:25978 Ensembl:ENST00000263780 Ensembl:ENST00000471660
GeneID:25978 KEGG:hsa:25978 UCSC:uc003dqp.4 GeneCards:GC03P087360
HGNC:HGNC:24537 HPA:HPA035069 MIM:600795 MIM:609512 MIM:614696
neXtProt:NX_Q9UQN3 Orphanet:275864 PharmGKB:PA142672112
InParanoid:Q9UQN3 PhylomeDB:Q9UQN3 ChiTaRS:CHMP2B
EvolutionaryTrace:Q9UQN3 GenomeRNAi:25978 NextBio:47630
ArrayExpress:Q9UQN3 Bgee:Q9UQN3 CleanEx:HS_CHMP2B
Genevestigator:Q9UQN3 GermOnline:ENSG00000083937 Uniprot:Q9UQN3
Length = 213
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 54/197 (27%), Positives = 95/197 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + K LA++LV
Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACKVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAV 207
SA TS+A ++ +
Sbjct: 187 SLPSASTSKATISDEEI 203
>ZFIN|ZDB-GENE-040426-2539 [details] [associations]
symbol:chmp2bb "chromatin modifying protein 2Bb"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2539
GO:GO:0015031 GeneTree:ENSGT00550000074737 EMBL:CR762462
IPI:IPI00493945 Ensembl:ENSDART00000125682 ArrayExpress:F1QLN0
Bgee:F1QLN0 Uniprot:F1QLN0
Length = 263
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 56/217 (25%), Positives = 104/217 (47%)
Query: 4 VMNMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAK 63
VM + K ++++ ++LR R I R ++++EK ++ IK AK + + K
Sbjct: 49 VMTSLFKKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACK 108
Query: 64 SLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAP 123
LA++LV+ RK R Y +++ S+S + + G + + + M+ VN M
Sbjct: 109 VLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPK 168
Query: 124 EVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLP 183
+ T+Q F KE K + EE +ND +D + V++VL I E + ++
Sbjct: 169 KTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMA 228
Query: 184 EAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEI 220
A R SA T++A D +++ D E++L+ +
Sbjct: 229 HAPSAARKTPSAATAKA----DGISDE-DIERQLKAL 260
>UNIPROTKB|E2R417 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
KO:K12192 OMA:DPQKTLK EMBL:AAEX03016386 EMBL:AAEX03016387
RefSeq:XP_544799.3 ProteinModelPortal:E2R417 SMR:E2R417
Ensembl:ENSCAFT00000012434 GeneID:487675 KEGG:cfa:487675
NextBio:20861232 Uniprot:E2R417
Length = 213
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/197 (26%), Positives = 95/197 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV
Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAV 207
SA TS+A ++ +
Sbjct: 187 SLPSASTSKATISDEEI 203
>UNIPROTKB|F2Z5Q1 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739 GO:GO:0005634
GO:GO:0015031 GeneTree:ENSGT00550000074737 OMA:DPQKTLK
EMBL:CU633644 ProteinModelPortal:F2Z5Q1 SMR:F2Z5Q1
Ensembl:ENSSSCT00000013128 Uniprot:F2Z5Q1
Length = 213
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/197 (26%), Positives = 95/197 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV
Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAV 207
SA TS+A ++ +
Sbjct: 187 SLPSASTSKATISDEEI 203
>MGI|MGI:1916192 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=ISO] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1916192 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
ChiTaRS:CHMP2B EMBL:AK004506 EMBL:AK084111 EMBL:BC042626
EMBL:BC055809 IPI:IPI00222386 RefSeq:NP_081155.1 UniGene:Mm.432944
ProteinModelPortal:Q8BJF9 SMR:Q8BJF9 STRING:Q8BJF9
PhosphoSite:Q8BJF9 PaxDb:Q8BJF9 PRIDE:Q8BJF9
Ensembl:ENSMUST00000004965 GeneID:68942 KEGG:mmu:68942
UCSC:uc007zqj.1 InParanoid:Q8BJF9 NextBio:328237 Bgee:Q8BJF9
CleanEx:MM_CHMP2B Genevestigator:Q8BJF9
GermOnline:ENSMUSG00000004843 Uniprot:Q8BJF9
Length = 213
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/197 (26%), Positives = 95/197 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV
Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAV 207
SA TS+A ++ +
Sbjct: 187 SLPSASTSKATISDEEI 203
>WB|WBGene00012903 [details] [associations]
symbol:vps-2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0009792 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AL110485 RefSeq:NP_496717.1
ProteinModelPortal:Q9U2F6 SMR:Q9U2F6 IntAct:Q9U2F6 STRING:Q9U2F6
PaxDb:Q9U2F6 EnsemblMetazoa:Y46G5A.12.1 EnsemblMetazoa:Y46G5A.12.2
EnsemblMetazoa:Y46G5A.12.3 GeneID:174908 KEGG:cel:CELE_Y46G5A.12
UCSC:Y46G5A.12.1 CTD:174908 WormBase:Y46G5A.12 InParanoid:Q9U2F6
NextBio:885996 Uniprot:Q9U2F6
Length = 237
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/178 (28%), Positives = 89/178 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P +LLR QR L + R ++R+ ++ +EK V IK+ AK+N + S K +A++LV
Sbjct: 8 RKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVKVMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
R+R+ + + KA + ++S+ + + + + M+ +N + P++ M
Sbjct: 68 RTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQKIMM 127
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEA 185
EF K+ + EE + DA+D AL V++VL + GE A LP A
Sbjct: 128 EFEKQSEIMDMKEEVMGDAIDDALGDAGDEEETDQIVNQVLDELGIQMGEEMAGLPSA 185
>ZFIN|ZDB-GENE-070628-3 [details] [associations]
symbol:chmp2ba "chromatin modifying protein 2Ba"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-070628-3 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 GeneTree:ENSGT00550000074737
HOVERGEN:HBG102628 KO:K12192 OrthoDB:EOG469QW1 EMBL:CR361551
IPI:IPI00509438 RefSeq:NP_001116769.1 UniGene:Dr.144266
Ensembl:ENSDART00000055866 GeneID:569532 KEGG:dre:569532
OMA:SADEEEC NextBio:20889725 Uniprot:B0UXH0
Length = 216
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 54/201 (26%), Positives = 96/201 (47%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ ++LR R I R ++R+E+ ++ IK AK + + K LA++LV
Sbjct: 7 KKTVDDIIKEQSKELRGTQRQITRDRAALERQERQMEMEIKKMAKTGNREACKILAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
+ RK NR Y +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 QLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQTVNKRMDPKKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
+F KE K G+ E+ +N +D D V++VL I E + ++ A +
Sbjct: 127 DFQKENMKMGMTEDMLNSTLDEIFDESADEEECQDIVNQVLDEIGIEISGKMVRAPSTGK 186
Query: 191 VKQSAQT--SRAAQEEDAVAE 209
+ A S+ A DA E
Sbjct: 187 ILPGASPAKSKTATISDAEIE 207
>UNIPROTKB|Q5ZHN1 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 EMBL:AJ721103 IPI:IPI00594797 RefSeq:NP_001074361.1
UniGene:Gga.7026 ProteinModelPortal:Q5ZHN1 STRING:Q5ZHN1
PRIDE:Q5ZHN1 GeneID:776036 KEGG:gga:776036 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 InParanoid:Q5ZHN1 KO:K12191
OrthoDB:EOG4HMJBJ NextBio:20922661 Uniprot:Q5ZHN1
Length = 220
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 54/213 (25%), Positives = 107/213 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + K +A++LV
Sbjct: 8 RKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVKKFITMRANVQAVSLKI-QTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKE 189
EF K+ + EE +NDA+D A+ V +VL + +L +
Sbjct: 127 MEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELA-TLPPP 185
Query: 190 RVKQSAQTSRAAQEEDAVAEGIDD-EKELEEIR 221
+A RAA+ A+A+ D E+ L+ +R
Sbjct: 186 GGSLAAGEGRAAEAAAALADADADLEERLKNLR 218
>UNIPROTKB|Q3SX42 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 EMBL:BC104514 IPI:IPI00696266
RefSeq:NP_001030549.1 UniGene:Bt.19768 ProteinModelPortal:Q3SX42
STRING:Q3SX42 Ensembl:ENSBTAT00000010436 GeneID:615954
KEGG:bta:615954 CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628
InParanoid:Q3SX42 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
NextBio:20899880 Uniprot:Q3SX42
Length = 213
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 52/197 (26%), Positives = 95/197 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
K ++++ R+LR R I R ++++EK ++ IK AK + + + LA++LV
Sbjct: 7 KKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLV 66
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQ 130
RK R + +++ S+S + + G ++ +A+ M+ VN M + TMQ
Sbjct: 67 HLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQ 126
Query: 131 EFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKER 190
F KE K + EE +ND +D D V++VL I E + ++ +A R
Sbjct: 127 NFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAR 186
Query: 191 VKQSAQTSRAAQEEDAV 207
SA TS++ ++ +
Sbjct: 187 SLPSASTSKSTISDEEI 203
>ZFIN|ZDB-GENE-040426-2922 [details] [associations]
symbol:bc2 "putative breast adenocarcinoma marker"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-2922 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191
OrthoDB:EOG4HMJBJ EMBL:BC045320 IPI:IPI00492134 RefSeq:NP_998682.1
UniGene:Dr.75361 ProteinModelPortal:Q7ZW25 STRING:Q7ZW25
PRIDE:Q7ZW25 GeneID:798901 KEGG:dre:798901 InParanoid:Q7ZW25
NextBio:20933600 ArrayExpress:Q7ZW25 Uniprot:Q7ZW25
Length = 220
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 50/213 (23%), Positives = 107/213 (50%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P+++LR QR L + R+++R+ + ++++EK + IK AK+ + + K +A++LV
Sbjct: 8 RKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVKKFIMMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKE 189
EF ++ + EE +NDA+D A+ V +VL + G T + +
Sbjct: 127 MEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDEL-GLTLSDELSNLPAT 185
Query: 190 RVKQSAQTSRAAQEEDAVAEGIDD-EKELEEIR 221
S + A+ + +A+ D E+ L +R
Sbjct: 186 GGSLSVAAGKKAEPQPTLADADADLEERLNNLR 218
>UNIPROTKB|E2RIU2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 CTD:27243 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AAEX03000690 RefSeq:XP_850536.1
ProteinModelPortal:E2RIU2 Ensembl:ENSCAFT00000003684 GeneID:476364
KEGG:cfa:476364 NextBio:20852037 Uniprot:E2RIU2
Length = 222
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 52/215 (24%), Positives = 106/215 (49%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + + +A++LV
Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAV 186
EF ++ + EE +NDA+D A+ V +VL + + + LP
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 187 RKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIR 221
V S + + AA A+ D E+ L+ +R
Sbjct: 187 GSLSVAASGKKAEAAASALVDADA-DLEERLKNLR 220
>UNIPROTKB|O43633 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0016197 GO:GO:0016044
EMBL:CH471135 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ EMBL:AF042384
EMBL:AJ277113 EMBL:AY364248 EMBL:BT007298 EMBL:CR457002
EMBL:AK311974 EMBL:BC002502 IPI:IPI00004416 RefSeq:NP_055268.1
RefSeq:NP_940818.1 UniGene:Hs.12107 ProteinModelPortal:O43633
SMR:O43633 DIP:DIP-48533N IntAct:O43633 MINT:MINT-5005843
STRING:O43633 PhosphoSite:O43633 OGP:O43633 PaxDb:O43633
PeptideAtlas:O43633 PRIDE:O43633 DNASU:27243
Ensembl:ENST00000312547 GeneID:27243 KEGG:hsa:27243 UCSC:uc002qti.3
GeneCards:GC19M059062 HGNC:HGNC:30216 HPA:HPA041153 HPA:HPA042031
MIM:610893 neXtProt:NX_O43633 PharmGKB:PA142672111
InParanoid:O43633 OMA:MEWLFGK PhylomeDB:O43633 ChiTaRS:CHMP2A
GenomeRNAi:27243 NextBio:50143 Bgee:O43633 CleanEx:HS_CHMP2A
Genevestigator:O43633 GermOnline:ENSG00000130724 Uniprot:O43633
Length = 222
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 52/215 (24%), Positives = 106/215 (49%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + + +A++LV
Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAV 186
EF ++ + EE +NDA+D A+ V +VL + + + LP
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 187 RKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIR 221
V + + AA A A+ D E+ L+ +R
Sbjct: 187 GSLSVAAGGKKAEAAASALADADA-DLEERLKNLR 220
>SGD|S000001485 [details] [associations]
symbol:DID4 "Class E Vps protein of the ESCRT-III complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0000815 "ESCRT III complex" evidence=IDA] [GO:0045324 "late
endosome to vacuole transport" evidence=IPI] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000001485 GO:GO:0015031
EMBL:BK006944 GO:GO:0045324 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 GO:GO:0043162 OrthoDB:EOG4WT0M1
GO:GO:0045053 EMBL:Z28002 PIR:S37812 RefSeq:NP_012924.2 PDB:2V6X
PDBsum:2V6X ProteinModelPortal:P36108 SMR:P36108 DIP:DIP-1916N
IntAct:P36108 MINT:MINT-404147 STRING:P36108 PaxDb:P36108
EnsemblFungi:YKL002W GeneID:853868 KEGG:sce:YKL002W CYGD:YKL002w
EvolutionaryTrace:P36108 NextBio:975133 Genevestigator:P36108
GermOnline:YKL002W GO:GO:0070676 Uniprot:P36108
Length = 232
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 53/214 (24%), Positives = 108/214 (50%)
Query: 14 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSR 73
PQ+ L+ QR L + R +ER+ R ++ ++K + IK +AK +++AK A++LVR+R
Sbjct: 14 PQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTR 73
Query: 74 KTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFS 133
+ + KAQ+ +IS+ + + + ++++ ++ +N M P++ EF
Sbjct: 74 NYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFE 133
Query: 134 KEMTKAGVIEEFVNDAVDTAL-DSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVK 192
K+ G +EF+++A+D + D V+KVL I + +QL ++ + V
Sbjct: 134 KQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQL-QSTPQNLVS 192
Query: 193 QS--AQTSRAAQEEDAVAEGIDDEKELEEIRARL 224
+ A+T+ E + ++++ARL
Sbjct: 193 NAPIAETAMGIPEPIGAGSEFHGNPD-DDLQARL 225
>MGI|MGI:1916203 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1916203 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK EMBL:AK005267 EMBL:BC012230 IPI:IPI00119020
RefSeq:NP_081161.1 UniGene:Mm.295670 ProteinModelPortal:Q9DB34
SMR:Q9DB34 STRING:Q9DB34 PaxDb:Q9DB34 PRIDE:Q9DB34
Ensembl:ENSMUST00000005711 GeneID:68953 KEGG:mmu:68953
UCSC:uc009ffc.2 GeneTree:ENSGT00550000074737 InParanoid:Q9DB34
NextBio:328271 Bgee:Q9DB34 CleanEx:MM_CHMP2A Genevestigator:Q9DB34
GermOnline:ENSMUSG00000033916 Uniprot:Q9DB34
Length = 222
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 51/215 (23%), Positives = 105/215 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + + +A++LV
Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAV 186
EF ++ + EE +NDA+D A+ V +VL + + + LP
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 187 RKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIR 221
V + + A A A+ D E+ L+ +R
Sbjct: 187 GSLSVAAGGKKAEATASALADADA-DLEERLKNLR 220
>RGD|1305050 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1305050 GO:GO:0005829
GO:GO:0015031 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
GeneTree:ENSGT00550000074737 EMBL:BC167093 EMBL:CH474090
IPI:IPI00360875 RefSeq:NP_001102376.1 UniGene:Rn.203178 SMR:B2RZB5
STRING:B2RZB5 Ensembl:ENSRNOT00000030931 GeneID:365191
KEGG:rno:365191 UCSC:RGD:1305050 NextBio:686824
Genevestigator:B2RZB5 Uniprot:B2RZB5
Length = 222
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 51/215 (23%), Positives = 105/215 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + + +A++LV
Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAV 186
EF ++ + EE +NDA+D A+ V +VL + + + LP
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTG 186
Query: 187 RKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIR 221
V + + A A A+ D E+ L+ +R
Sbjct: 187 GSLSVAAGGKKAEATASALADADA-DLEERLKNLR 220
>UNIPROTKB|Q3T0U5 [details] [associations]
symbol:CHMP2A "Chromatin modifying protein 2A" species:9913
"Bos taurus" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK GeneTree:ENSGT00550000074737 EMBL:DAAA02047921
EMBL:BC102258 IPI:IPI00705335 RefSeq:NP_001029722.1 UniGene:Bt.5624
STRING:Q3T0U5 Ensembl:ENSBTAT00000018429 GeneID:523847
KEGG:bta:523847 InParanoid:Q3T0U5 NextBio:20873841 Uniprot:Q3T0U5
Length = 222
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 52/220 (23%), Positives = 107/220 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELV 70
+ P++LLR QR L + R ++R+ + ++ +EK + IK AK+ + + + +A++LV
Sbjct: 8 RKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLV 67
Query: 71 RSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAATM 129
R+R+ V + +A + ++S+ + +++ ++ K + M +N +K P++ M
Sbjct: 68 RTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIM 126
Query: 130 QEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKE 189
EF ++ + EE +NDA+D A+ V +VL + +L
Sbjct: 127 MEFERQAEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVAQVLDELGLSLTDELSNL---P 183
Query: 190 RVKQSAQTSRAAQEEDAVAEG-IDDEKELEEIRARLAKVR 228
S + ++ +A A +D + +LEE RL +R
Sbjct: 184 STGGSLSVAAGGKKAEATASALVDADADLEE---RLKNLR 220
>FB|FBgn0035589 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
EMBL:AE014296 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
eggNOG:NOG268821 KO:K12192 OMA:DPQKTLK EMBL:AY061433
RefSeq:NP_647947.1 UniGene:Dm.850 SMR:Q9VRJ5 STRING:Q9VRJ5
EnsemblMetazoa:FBtr0077166 GeneID:38599 KEGG:dme:Dmel_CG4618
UCSC:CG4618-RA FlyBase:FBgn0035589 InParanoid:Q9VRJ5
OrthoDB:EOG4MPG6C GenomeRNAi:38599 NextBio:809457 Uniprot:Q9VRJ5
Length = 212
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 47/180 (26%), Positives = 94/180 (52%)
Query: 6 NMIKPKPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSL 65
N+ KP ++ R+ R LR+ R+IER+ R ++ EE+ ++ I+ A + + + L
Sbjct: 4 NIFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRIL 63
Query: 66 AQELVRSRKTVNRLYENKAQMNSI---SMHLGESVAIARTVGHLNKSAEVMKLVNNLMKA 122
A++LV RK +R Y ++ SI + ++G ++A++ +G +A+ M +N +M+
Sbjct: 64 AKQLVEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMG---TTAKTMGEMNKVMRP 120
Query: 123 PEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQL 182
+ T+++F K + +E +ND +D L+ V+KVL I E + ++
Sbjct: 121 EAIGETVRQFQAANMKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKM 180
>ASPGD|ASPL0000001940 [details] [associations]
symbol:AN6898 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0015031 EMBL:BN001301 GO:GO:0000815 OMA:MEWLFGK GO:GO:0070676
EnsemblFungi:CADANIAT00007700 Uniprot:C8V2X5
Length = 226
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 14 PQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSR 73
P + LR QR L + R ++R+ ++ +EK + + IK +AK + + K A++LVR+R
Sbjct: 14 PAERLRKHQRALDRTQRELDRERTKLENQEKKLIQDIKKSAKNGQIGACKIQAKDLVRTR 73
Query: 74 KTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFS 133
+ + + Y+ + Q+ +IS+ + + + + + + ++ +N M P + EF
Sbjct: 74 RYIQKFYQMRTQLQAISLRIQTVRSNEQMMQSMKGATMLLGSMNRQMNLPALQRIAMEFE 133
Query: 134 KEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---GETAAQLPEAVRKER 190
+E +E ++DA+D A V +VL I + + P ++KE
Sbjct: 134 RENDIMDQRQEMMDDAIDEATGIEGEEEEGEDIVKEVLDEIGVDLSQALGETPSGIQKES 193
Query: 191 VKQSAQTSRAAQEEDAV-AEGIDDEKELEEIRARLAKVR 228
V + R AQ A A G D+ +L+ ARL +R
Sbjct: 194 VSEG----RVAQAIGAGGAGGASDDDDLQ---ARLDSLR 225
>POMBASE|SPAC4F8.01 [details] [associations]
symbol:did4 "ESCRT III complex subunit Did4" species:4896
"Schizosaccharomyces pombe" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC4F8.01 EMBL:CU329670
GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491 HOGENOM:HOG000177218
KO:K12191 OMA:MEWLFGK GO:GO:0006900 PIR:T38831 RefSeq:NP_593871.3
ProteinModelPortal:O14177 STRING:O14177 EnsemblFungi:SPAC4F8.01.1
GeneID:2543521 KEGG:spo:SPAC4F8.01 OrthoDB:EOG4WT0M1
NextBio:20804531 GO:GO:0045053 Uniprot:O14177
Length = 210
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 43/173 (24%), Positives = 87/173 (50%)
Query: 13 NPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRS 72
+PQ+ LR QR L + R ++R+ + + E+ + + IK +AK + +A+ A++L+R
Sbjct: 13 SPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLMRL 72
Query: 73 RKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEF 132
R + ++ K Q+ +IS+ L + + + + ++ +N M P +A Q+F
Sbjct: 73 RNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMARITQQF 132
Query: 133 SKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEA 185
+E +E +++ +D AL+ V+KVL I + + LP+A
Sbjct: 133 ERENEIMEQRQEMIDENMDDALEEDDEEEADEL-VNKVLDEIGVDLSQGLPDA 184
>DICTYBASE|DDB_G0290087 [details] [associations]
symbol:vps2A "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0290087 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0000815 eggNOG:COG5491 KO:K12191 EMBL:AAFI02000152
RefSeq:XP_635908.2 ProteinModelPortal:Q54GK9 STRING:Q54GK9
EnsemblProtists:DDB0234032 GeneID:8627474 KEGG:ddi:DDB_G0290087
OMA:QDMFEDD Uniprot:Q54GK9
Length = 206
Score = 149 (57.5 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/199 (24%), Positives = 97/199 (48%)
Query: 11 KPNPQQLLRDWQRKLRQECRNIERQIRDIQREEKNVQKAIKDAAK--RNDLSSAKSLAQE 68
K P+Q L+D +R+L + R ++R++ ++ E+ IK AK RND AK +A +
Sbjct: 8 KKTPEQELKDSKRELSKGQREMDRELNRLKIVEQEYIGKIKQLAKAGRND--EAKRMAND 65
Query: 69 LVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNLMKAPEVAA 127
LV+ R + R+ K ++++S ++ +T+ + SA + M +N ++
Sbjct: 66 LVKLRGQMERMRATKTTLSAVSTKT-TTIKANQTMANAMASATKAMSTMNKQTDLVQLQK 124
Query: 128 TMQEFSKEMTKAGVIEEFVNDAV-DTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAV 186
TM E+ K+ + + EE + D D +D + KV+ + + ++P
Sbjct: 125 TMMEYEKQTQRVEMTEEMMQDMFEDDEVDEEADDI-----LSKVVDEVCLDNYQKMPSVA 179
Query: 187 RKERVKQSAQTSRAAQEED 205
+K+ + S++TS E++
Sbjct: 180 QKD-LPYSSKTSTFKTEDE 197
>UNIPROTKB|C9J0A7 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOGENOM:HOG000177218 EMBL:AC123511 EMBL:AC130885 HGNC:HGNC:24537
ChiTaRS:CHMP2B IPI:IPI00947040 ProteinModelPortal:C9J0A7
STRING:C9J0A7 PRIDE:C9J0A7 Ensembl:ENST00000494980
ArrayExpress:C9J0A7 Bgee:C9J0A7 Uniprot:C9J0A7
Length = 183
Score = 133 (51.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/169 (24%), Positives = 73/169 (43%)
Query: 47 QKAIKDAAKRNDLSSAKSLAQELVRSRKTVNRLYENKAQMNSISM-HLGESVA---IART 102
+K + D K + + + ++R R + + E + ++ M +G A +A+
Sbjct: 7 KKTVDDVIKEQN-RELRGTQRAIIRDRAALEK-QEKQLELEIKKMAKIGNKEACKVLAKQ 64
Query: 103 VGHLNKSAE----VMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXX 158
+ HL K M+ VN M + TMQ F KE K + EE +ND +D D
Sbjct: 65 LVHLRKQKTRTFATMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSD 124
Query: 159 XXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRAAQEEDAV 207
V++VL I E + ++ +A R SA TS+A ++ +
Sbjct: 125 DEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEI 173
>RGD|1306781 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1306781 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737
IPI:IPI00766292 Ensembl:ENSRNOT00000000904 Uniprot:F1M8B7
Length = 107
Score = 118 (46.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 111 EVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKV 170
+ M+ VN M + TMQ F KE K + EE +ND +D D V++V
Sbjct: 1 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQV 60
Query: 171 LTAIAGETAAQLPEAVRKERVKQSAQTSRAAQEEDAV 207
L I E + ++ +A R SA TS+A ++ +
Sbjct: 61 LDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEI 97
>UNIPROTKB|I3LSS2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0015031 GeneTree:ENSGT00550000074737
Ensembl:ENSSSCT00000030728 OMA:FITMRAN Uniprot:I3LSS2
Length = 167
Score = 120 (47.3 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 37/165 (22%), Positives = 77/165 (46%)
Query: 61 SAKSLAQELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLNKSA-EVMKLVNNL 119
+ + +A++LVR+R+ V + +A + ++S+ + +++ ++ K + M +N
Sbjct: 3 AVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKI-QTLKSNNSMAQAMKGVTKAMGTMNRQ 61
Query: 120 MKAPEVAATMQEFSKEMTKAGVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIA---G 176
+K P++ M EF ++ + EE +NDA+D A+ V +VL +
Sbjct: 62 LKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVAQVLDELGLSLT 121
Query: 177 ETAAQLPEAVRKERVKQSAQTSRAAQEEDAVAEGIDDEKELEEIR 221
+ + LP V S + + AA A+ D E+ L+ +R
Sbjct: 122 DELSNLPSTGGSLSVAASGKKAEAAASALVDADA-DLEERLKNLR 165
>TAIR|locus:2007883 [details] [associations]
symbol:VPS46.1 "vacuolar protein sorting 46.1"
species:3702 "Arabidopsis thaliana" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
[GO:0032509 "endosome transport via multivesicular body sorting
pathway" evidence=IGI] [GO:0040007 "growth" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002684 GO:GO:0040007 GO:GO:0015031
GO:GO:0000578 eggNOG:COG5491 KO:K12197 GO:GO:0032509 OMA:AKMATIT
EMBL:AY085606 EMBL:AK118350 IPI:IPI00533081 RefSeq:NP_173215.1
UniGene:At.41817 IntAct:Q8LE58 STRING:Q8LE58
EnsemblPlants:AT1G17730.1 GeneID:838349 KEGG:ath:AT1G17730
TAIR:At1g17730 InParanoid:Q8LE58 ProtClustDB:CLSN2682103
Genevestigator:Q8LE58 Uniprot:Q8LE58
Length = 203
Score = 120 (47.3 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 42/203 (20%), Positives = 90/203 (44%)
Query: 24 KLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSRKTVNRLYENK 83
+L+ ++++RQ R ++EE++ + +K A ++ ++ A+ A+ +R R
Sbjct: 13 ELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLS 72
Query: 84 AQMNSISMHL---GESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAG 140
++++++ L + I +++ ++ KS E NL K E TM F K+
Sbjct: 73 SRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSE---TMDSFEKQFVNME 129
Query: 141 VIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRA 200
V EF+ D A+ V+ ++ +A + ++ + Q A +
Sbjct: 130 VQAEFM----DNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGL-----PQPAGHAIP 180
Query: 201 AQEEDAVAEGIDDEKELEEIRAR 223
+ E+ V E D + L E++AR
Sbjct: 181 TKTEEKVEED-DLTRRLAELKAR 202
>UNIPROTKB|P0C149 [details] [associations]
symbol:SNF7 "Vacuolar-sorting protein SNF7" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 GO:GO:0010008
EMBL:CM001236 eggNOG:NOG291419 KO:K12194 OrthoDB:EOG4TMVBN
RefSeq:XP_003719742.1 ProteinModelPortal:P0C149 STRING:P0C149
EnsemblFungi:MGG_04095T0 GeneID:2677595 KEGG:mgr:MGG_04095
Uniprot:P0C149
Length = 226
Score = 119 (46.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 52/210 (24%), Positives = 100/210 (47%)
Query: 32 IERQIRDIQREEKNVQKAI--KDAAKRNDLSSAKSLAQELVRSRKT-VNRLYENKAQMNS 88
+ Q+ +Q+ EK++Q I +DA R ++S+ K+ A+ ++ +KT + L + +Q+ +
Sbjct: 27 LRSQLDMLQKREKHLQNQISEQDAIARKNISTNKNAAKAALKRKKTHEHSLDQTLSQIGT 86
Query: 89 ISMHLG--ESVAI-ARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEF------SKEMTKA 139
+ + ES I T+ + K+ + M+ ++ + +V TM + S+E+ A
Sbjct: 87 LEQQINAIESANINMETLEAMKKAGKAMEDIHGKLTVEKVDETMDKLREQNALSEEIVNA 146
Query: 140 GVIEEFVNDAVDTA-LDSXXXXXXXXXXVDKVL---TAIAGETAAQLPEAVRKERVKQSA 195
+ N+A+D A L+ +K+L T + +LP A E +K A
Sbjct: 147 ITNNQLGNEAIDDADLEDELEAMEQEQLDEKILKTGTGPVSDAIQRLPAAANGE-LKGKA 205
Query: 196 QTSRAAQEEDAVAEGIDDEKELEEIRARLA 225
T EED D+E EL +++A +A
Sbjct: 206 TTV----EED------DEEAELRKLQAEMA 225
>TAIR|locus:2032607 [details] [associations]
symbol:VPS46.2 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS;RCA] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0032509 "endosome transport via
multivesicular body sorting pathway" evidence=IGI] [GO:0040007
"growth" evidence=IGI] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002684 GO:GO:0040007 GO:GO:0015031 GO:GO:0009793
EMBL:AC008017 GO:GO:0000578 KO:K12197 OMA:EHLFNLK GO:GO:0032509
ProtClustDB:CLSN2682103 UniGene:At.22952 UniGene:At.71264
EMBL:AY059851 EMBL:AY081673 IPI:IPI00527973 PIR:G96755
RefSeq:NP_565053.1 ProteinModelPortal:Q9SSM4 IntAct:Q9SSM4
STRING:Q9SSM4 PRIDE:Q9SSM4 EnsemblPlants:AT1G73030.1 GeneID:843634
KEGG:ath:AT1G73030 TAIR:At1g73030 InParanoid:Q9SSM4
PhylomeDB:Q9SSM4 ArrayExpress:Q9SSM4 Genevestigator:Q9SSM4
Uniprot:Q9SSM4
Length = 203
Score = 113 (44.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 44/202 (21%), Positives = 86/202 (42%)
Query: 25 LRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSRKTVNRLYENKA 84
L+ ++++RQ R ++EEK + +K A ++ ++ A+ A+ +R R +
Sbjct: 14 LKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLAS 73
Query: 85 QMNSISMHL---GESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGV 141
+++++ L + I +++ ++ KS E NL K E TM F K+ V
Sbjct: 74 RLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSE---TMDSFEKQFVNMEV 130
Query: 142 IEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRAA 201
EF+ +A+ + + +V E + LP Q A +
Sbjct: 131 QAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLP---------QPAGHAIPT 181
Query: 202 QEEDAVAEGIDDEKELEEIRAR 223
+ E+ V E D + L E++AR
Sbjct: 182 KTEEKVDED-DLSRRLAELKAR 202
>FB|FBgn0036805 [details] [associations]
symbol:Chmp1 "Chmp1" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031 eggNOG:COG5491 KO:K12197
GeneTree:ENSGT00550000074957 OMA:AKMATIT EMBL:AY060798
RefSeq:NP_649051.3 UniGene:Dm.3851 STRING:Q95SH2
EnsemblMetazoa:FBtr0075092 GeneID:40036 KEGG:dme:Dmel_CG4108
UCSC:CG4108-RA CTD:40036 FlyBase:FBgn0036805 InParanoid:Q95SH2
OrthoDB:EOG4GTHW3 GenomeRNAi:40036 NextBio:816669 Uniprot:Q95SH2
Length = 203
Score = 108 (43.1 bits), Expect = 0.00032, P = 0.00032
Identities = 39/200 (19%), Positives = 92/200 (46%)
Query: 25 LRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSR-KTVNRLYENK 83
L+ + +ER + ++EEK + K A ++ ++ A+ A+ +R + + VN L
Sbjct: 13 LKFAVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYL-RMS 71
Query: 84 AQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEM----TKA 139
A++++++ + ++ + G + + M M ++++ M++F + ++
Sbjct: 72 ARVDAVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQS 131
Query: 140 GVIEEFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSR 199
V+E ++D V T++ VD +L +A E +L + QS S
Sbjct: 132 SVMEGTMSDTVTTSVPQGD--------VDNLLQQVADEAGLELNMELPSGVQSQSVGAST 183
Query: 200 A-AQEEDAVAEGIDDEKELE 218
A +QE+D + + + ++ E
Sbjct: 184 AVSQEQDELTQRLARLRQAE 203
>ASPGD|ASPL0000059049 [details] [associations]
symbol:AN0166 species:162425 "Emericella nidulans"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0051455 "attachment of spindle microtubules to kinetochore
involved in homologous chromosome segregation" evidence=IEA]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0000778
"condensed nuclear chromosome kinetochore" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031617 "NMS complex"
evidence=IEA] InterPro:IPR005549 Pfam:PF03800 GO:GO:0005634
GO:GO:0051301 GO:GO:0007067 EMBL:BN001308 GO:GO:0000777
EMBL:AACD01000005 KO:K11548 eggNOG:NOG274471 RefSeq:XP_657770.1
ProteinModelPortal:Q5BH14 STRING:Q5BH14 GeneID:2875944
KEGG:ani:AN0166.2 HOGENOM:HOG000175733 OrthoDB:EOG4FV08B
Uniprot:Q5BH14
Length = 463
Score = 107 (42.7 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 49/203 (24%), Positives = 98/203 (48%)
Query: 25 LRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDLSSAKSLAQELVRSRKTVNRLYEN-K 83
L E + +E+++ +++R K + +K+ +RND KS +EL R+++ V E K
Sbjct: 178 LYTENQEMEQRLEEMRRVLKANEAEVKEKVRRND--ELKSRLRELGRTQEKVAETLERVK 235
Query: 84 AQMNSISMHLGESVAIARTVGHLNKSAEVMKLVNNLMKAPEVAATMQEFSKEMTKAGVIE 143
A+ L E + RTV EV KL +M++P A++Q E++++ + E
Sbjct: 236 AEKARQQNLLKEKME--RTV---RTRQEVEKLRPYVMESP---ASLQSSLTELSESLLRE 287
Query: 144 EFVNDAVDTALDSXXXXXXXXXXVDKVLTAIAGETAAQLPEAVRKERVKQSAQTSRAAQE 203
+ DA++ + V + A +L E + E K+ + SRA++
Sbjct: 288 KNQIDAMEKRARALQTSSDTFTVVSNDVQA-----CIKLLEDIAVELQKEEDEESRASRN 342
Query: 204 EDAVAEGIDDEKELEEIRARLAK 226
++A++E ++ +E+E+ L +
Sbjct: 343 KEAISERGNNVREVEQTEKLLQR 365
Score = 43 (20.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 6 NMIKPKPNPQQLLRDWQRKL 25
++IKP P Q++ +W +L
Sbjct: 54 DLIKPNPQQVQMVLEWFAEL 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.123 0.316 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 219 0.00092 112 3 10 23 0.44 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 601 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.08u 0.14s 39.22t Elapsed: 00:00:02
Total cpu time: 39.08u 0.14s 39.22t Elapsed: 00:00:02
Start: Thu May 9 21:06:16 2013 End: Thu May 9 21:06:18 2013