Query 027051
Match_columns 229
No_of_seqs 196 out of 614
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 06:27:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027051.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027051hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ayu_A Nucleosome assembly pro 100.0 4.6E-50 1.6E-54 373.5 12.3 159 5-163 182-366 (417)
2 3fs3_A Nucleosome assembly pro 100.0 3.8E-49 1.3E-53 360.0 13.5 171 5-175 108-307 (359)
3 2zd7_A VPS75, vacuolar protein 100.0 2.4E-46 8.2E-51 331.2 10.0 153 3-164 49-223 (264)
4 2e50_A Protein SET; histone ch 100.0 1.8E-45 6.2E-50 318.9 10.4 139 3-159 73-222 (225)
5 3kyp_A Pfnaps, nucleosome asse 100.0 4.3E-45 1.5E-49 310.0 3.8 140 3-161 43-192 (193)
6 2ayu_A Nucleosome assembly pro 99.3 7.3E-13 2.5E-17 123.4 3.7 58 169-226 80-137 (417)
7 3fs3_A Nucleosome assembly pro 99.3 2.5E-12 8.4E-17 117.5 6.0 57 171-227 41-97 (359)
8 2e50_A Protein SET; histone ch 99.1 7.2E-11 2.5E-15 101.9 5.6 56 171-226 18-73 (225)
9 2jo8_A Serine/threonine-protei 80.1 3 0.0001 27.5 4.6 35 188-222 12-46 (51)
10 2q2f_A Selenoprotein S; anti-p 58.5 21 0.00071 25.9 5.3 36 177-212 38-77 (89)
11 1z8u_A Alpha-hemoglobin stabil 53.2 34 0.0011 25.2 5.8 48 143-206 38-85 (102)
12 3bhp_A UPF0291 protein YNZC; N 52.0 15 0.00051 24.9 3.5 38 179-217 4-41 (60)
13 2ke4_A CDC42-interacting prote 50.5 24 0.00081 26.0 4.7 34 171-209 5-38 (98)
14 2jvd_A UPF0291 protein YNZC; s 48.1 17 0.00057 24.1 3.1 38 179-217 4-41 (54)
15 2p2u_A HOST-nuclease inhibitor 42.2 43 0.0015 26.8 5.5 45 181-225 18-62 (171)
16 2hep_A UPF0291 protein YNZC; S 37.6 32 0.0011 24.8 3.6 38 179-217 4-41 (85)
17 2wt7_B Transcription factor MA 32.9 99 0.0034 22.4 5.6 20 199-218 71-90 (90)
18 2akf_A Coronin-1A; coiled coil 31.3 57 0.002 18.9 3.2 26 177-202 4-29 (32)
19 1kil_E Complexin I snare-compl 30.7 1.1E+02 0.0037 19.7 5.8 38 180-217 10-47 (49)
20 3g9g_A Suppressor of yeast pro 30.4 68 0.0023 27.9 5.2 32 180-215 47-78 (287)
21 2zqm_A Prefoldin beta subunit 29.6 1.4E+02 0.0048 21.4 6.2 41 179-219 73-113 (117)
22 3rk3_E Complexin-1; snare prot 28.8 1.3E+02 0.0046 20.1 5.9 41 178-218 11-51 (63)
23 1xpp_A TA1416, DNA-directed RN 24.9 1E+02 0.0034 23.2 4.6 70 138-210 31-104 (115)
24 3aco_A Pacsin2, protein kinase 24.0 80 0.0027 27.4 4.5 16 201-216 50-65 (350)
25 4afl_A P29ING4, inhibitor of g 23.3 1.1E+02 0.0036 22.0 4.4 27 171-197 10-36 (104)
26 2x3v_A Syndapin I, protein kin 22.8 88 0.003 26.8 4.5 16 201-216 41-56 (337)
27 1l4a_E Synaphin A; snare, snar 21.2 87 0.003 22.0 3.3 41 178-218 15-55 (79)
28 3abh_A Pacsin2, protein kinase 21.1 53 0.0018 27.9 2.7 15 201-215 50-64 (312)
29 2v0o_A FCHO2, FCH domain only 20.5 56 0.0019 26.9 2.7 19 200-218 38-56 (276)
30 3tjj_A Peroxiredoxin-4; thiore 20.1 22 0.00076 29.8 0.0 16 84-99 224-239 (254)
No 1
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=100.00 E-value=4.6e-50 Score=373.54 Aligned_cols=159 Identities=38% Similarity=0.685 Sum_probs=142.5
Q ss_pred cCCCCchHHHHHhcChhHHhhcchhhHHHhccchhceeeEccC-CCceEEEEEe--CCCCcccCceEEEEEEEecC----
Q 027051 5 EKGVPNFWLTAMKNNSLLAQEITKADEEALKYLIDIKSSRLVC-CPEFKLEFFF--GPNPYFKNYVLAKKFIMIDE---- 77 (229)
Q Consensus 5 i~~IP~FW~~vl~N~~~l~~~I~~~De~iL~~L~dI~ve~~~d-~~~f~l~F~F--~~NpYF~N~vLtK~y~~~~~---- 77 (229)
++|||+||+|||+||++|+.||+++|++||+||+||+|++..+ ++||+|+|+| .+||||+|++|||+|++..+
T Consensus 182 ~kgIP~FWltalkN~~~lse~I~e~De~iLk~L~DI~Ve~~~d~~~gF~L~F~F~~~~NpYF~N~vLtKtY~~~~e~~~~ 261 (417)
T 2ayu_A 182 VKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRPGFKLLFRFDSSANPFFTNDILCKTYFYQKELGYS 261 (417)
T ss_dssp CSSCTTHHHHHHHTSTTGGGTCCHHHHTGGGGEEEEECCBCCSSSCEEEEEEEECTTTCSSBCCSEEEEEEEEESSCCSS
T ss_pred ccCCccHHHHHHHcChHHHHhhhhhhHHHHhhccceEEEEccCCCcceEEEEEeCCCCCccccCCeEEEEEEEeccCCCC
Confidence 5899999999999999999999999999999999999999876 5699999999 99999999999999999753
Q ss_pred Cceeeeceeeceeeeec-CCCcccccccCCCC----------------cccccccccCCCCCCC--ccccHHHHHhhhhh
Q 027051 78 VKLIFDEAIGSKIKWYP-EKCLTRECSTRKPK----------------KSFFNFFKSLEFPFYD--ESIDVKLLHQLEHD 138 (229)
Q Consensus 78 ~~~~~~~~~~t~I~Wk~-gkdlt~~~~~kk~~----------------~SFF~fF~~~~~p~~~--~~~dee~~~~l~~D 138 (229)
|..++.+++||+|+||+ |||||+++++||++ .||||||+++..|+++ ++.+++++++|+.|
T Consensus 262 g~~~~~~~egt~I~WK~~GknlT~k~~kkKqr~K~~~~~R~v~k~v~~~SFFnfFspp~~p~~dede~~~ee~e~~l~~D 341 (417)
T 2ayu_A 262 GDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIESFFNFFDPPKIQNEDQDEELEEDLEERLALD 341 (417)
T ss_dssp SSCEEEEEEECCCCBSCTTTCTTEEEEECCC---------CCEEEEECCCGGGGGSCSCSCCCTTSSSTTHHHHHHHHHH
T ss_pred CCcccccccCcceeeecCCCCcchhhhhhcccccCCCcccccccCCCCCCceeecCCCCCCCccccccchHHHHHHHHHH
Confidence 44555679999999999 99999998876653 2999999999988765 23456799999999
Q ss_pred hHHHHHhhhccccchhhhhccccCC
Q 027051 139 YKIGVTIKKEIVCHAISWFCGDATC 163 (229)
Q Consensus 139 ~eig~~i~d~IiP~al~yy~g~~~~ 163 (229)
|+||++|+++|||+||.||||++.+
T Consensus 342 feIG~~Ikd~IiP~AV~yftGea~~ 366 (417)
T 2ayu_A 342 YSIGEQLKDKLIPRAVDWFTGAALE 366 (417)
T ss_dssp HHHHHHHHHTTTTTHHHHHHSHHHH
T ss_pred HHHHHHHHhhccccHHHHhcccccc
Confidence 9999999999999999999997765
No 2
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=100.00 E-value=3.8e-49 Score=359.99 Aligned_cols=171 Identities=30% Similarity=0.521 Sum_probs=127.5
Q ss_pred cCCCCchHHHHHhcChhHHhhcchhhHHHhccchhceeeEcc----CCCceEEEEEeCCCCcccCceEEEEEEEec---C
Q 027051 5 EKGVPNFWLTAMKNNSLLAQEITKADEEALKYLIDIKSSRLV----CCPEFKLEFFFGPNPYFKNYVLAKKFIMID---E 77 (229)
Q Consensus 5 i~~IP~FW~~vl~N~~~l~~~I~~~De~iL~~L~dI~ve~~~----d~~~f~l~F~F~~NpYF~N~vLtK~y~~~~---~ 77 (229)
.+|||+||++||+||++++.+|+++|+++|+||+||+|++.. +++||+|+|+|++||||+|++|+|+|++.. +
T Consensus 108 ~kgIP~FWltvl~Nhp~ls~~I~e~De~iL~yL~DI~Ve~l~~~~~~~~gfkI~F~F~eNpYF~N~vLtKey~l~~~~~~ 187 (359)
T 3fs3_A 108 TPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKEGFILSFYFATNPFFSNSVLTKTYHMKCVDCD 187 (359)
T ss_dssp STTSTTHHHHHHHTSHHHHTTCCHHHHHHHTTEEEEEEEECC-------CEEEEEEECSCSSBCCSEEEEEEEEC-----
T ss_pred cCCCCcHHHHHHHhchHHHHhccHhHHHHHhhcceeEEEEeccCCCCCCceEEEEEeCCCCcccCCEEEEEEEEeccCCC
Confidence 359999999999999999999999999999999999999863 356999999999999999999999999974 3
Q ss_pred CceeeeceeeceeeeecCCCcccccccCCCC----------------cccccccccCCCCCCCcc------ccHHHHHhh
Q 027051 78 VKLIFDEAIGSKIKWYPEKCLTRECSTRKPK----------------KSFFNFFKSLEFPFYDES------IDVKLLHQL 135 (229)
Q Consensus 78 ~~~~~~~~~~t~I~Wk~gkdlt~~~~~kk~~----------------~SFF~fF~~~~~p~~~~~------~dee~~~~l 135 (229)
|+|++..++||+|+||+|||+|+++++||++ .||||||+++.+|++++. ..++++++|
T Consensus 188 ~dp~~~~se~t~I~WK~GKdlT~k~~~kKqr~K~t~~~R~v~k~~~~eSFFnfFspp~~p~~de~~~~de~~~~~~e~~l 267 (359)
T 3fs3_A 188 NEPVLLHTEATVIDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHEVAQLEMII 267 (359)
T ss_dssp ---CEEEEEECCCCBCTTCCTTCC----------------------CCCGGGGSCCBCC------------CHHHHHHHH
T ss_pred CCcccccceeeeeeEeCCCccchhhhhhhccccCCCCceeeeccCCCCCceeeCCCCCCCCcccccccchhhhHHHHHHH
Confidence 4676678999999999999999987655432 399999999998876531 123588999
Q ss_pred hhhhHHHHHhhhccccchhhhhccccCCccccccccccCC
Q 027051 136 EHDYKIGVTIKKEIVCHAISWFCGDATCGRRTKRKIEYDN 175 (229)
Q Consensus 136 ~~D~eig~~i~d~IiP~al~yy~g~~~~~~d~~~~~~~~~ 175 (229)
+.||+||++|+++|||+||.||||++.++++++-.++.+-
T Consensus 268 ~~DfeIGe~Ikd~IiP~av~yftGea~e~e~~~~~~d~~~ 307 (359)
T 3fs3_A 268 EGDYEVALTIKERIIPYAVDYYLGIIIESESNSIVSDVDS 307 (359)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTTCC--------------
T ss_pred HHhHHHHHHHHhceecChHHhhCCcccccccCCccccccc
Confidence 9999999999999999999999999998776555444443
No 3
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=100.00 E-value=2.4e-46 Score=331.19 Aligned_cols=153 Identities=16% Similarity=0.217 Sum_probs=130.2
Q ss_pred cccCCCCchHHHHHhcChhHHhhcchhhHHHhccchhceeeEc------cCCCceEEEEEeCC-CCcccCceEEEEEEEe
Q 027051 3 NEEKGVPNFWLTAMKNNSLLAQEITKADEEALKYLIDIKSSRL------VCCPEFKLEFFFGP-NPYFKNYVLAKKFIMI 75 (229)
Q Consensus 3 e~i~~IP~FW~~vl~N~~~l~~~I~~~De~iL~~L~dI~ve~~------~d~~~f~l~F~F~~-NpYF~N~vLtK~y~~~ 75 (229)
++|+|||+||++||+||++++.+|+++|++||+||+||+|+++ ++++||+|+|+|++ ||||+|++|||+|++.
T Consensus 49 eII~~IP~FWltal~n~~~l~~~I~e~De~iL~~L~dI~v~~~~~~~~~~~~~gf~i~F~F~~~NpyF~N~vLtK~y~~~ 128 (264)
T 2zd7_A 49 AYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIK 128 (264)
T ss_dssp HHHTTCTTHHHHHHHHSTTGGGGSCGGGHHHHTTEEEEEEEEGGGTCTTSCTTCEEEEEEECCBTTTBCCEEEEEEEEEE
T ss_pred HHHhcchhHHHHHHHcChHHHhhcCHhhHHHHHhcCceEEEEecccccCCCCCceEEEEEeCCCCCCccCCeEEEEEEec
Confidence 5789999999999999999999999999999999999999995 45679999999999 9999999999999998
Q ss_pred cC--C-ceeeeceeeceeeeecCC-CcccccccCCCC-----------cccccccccCCCCCCCccccHHHHHhhhhhhH
Q 027051 76 DE--V-KLIFDEAIGSKIKWYPEK-CLTRECSTRKPK-----------KSFFNFFKSLEFPFYDESIDVKLLHQLEHDYK 140 (229)
Q Consensus 76 ~~--~-~~~~~~~~~t~I~Wk~gk-dlt~~~~~kk~~-----------~SFF~fF~~~~~p~~~~~~dee~~~~l~~D~e 140 (229)
.+ | .+.+.+|+||+|+||+|+ ++|++++++|++ .|||+||+++..++.+ .+..|++
T Consensus 129 ~~~dg~~~~~~~s~~t~I~WK~g~~~~~~~~~~kk~~~~~~~~~r~~~~SFF~fF~~~~~~~~~---------~~~~d~e 199 (264)
T 2zd7_A 129 KGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGK---------EFPHGDS 199 (264)
T ss_dssp CCSSSCCCCEEEECCCCCCCCGGGGGGCTTTCSCSSSHHHHHHHHHHHTSHHHHTTCCSSSTTS---------SSTTHHH
T ss_pred ccCCCCCCCceeEeecccccCCCccccchhhhhhccccccccccCCCCCCcceecCCCCCCccc---------cccCchh
Confidence 64 3 233358999999999976 456655544321 3999999998876543 1456899
Q ss_pred HHHHhhhccccchhhhhccccCCc
Q 027051 141 IGVTIKKEIVCHAISWFCGDATCG 164 (229)
Q Consensus 141 ig~~i~d~IiP~al~yy~g~~~~~ 164 (229)
||++|+++|||+||.||+|++.++
T Consensus 200 ig~~Ikd~I~P~al~yf~g~~~d~ 223 (264)
T 2zd7_A 200 LASLFSEEIYPFCVKYYAEAQRDL 223 (264)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhccCHHHHhccccccc
Confidence 999999999999999999987754
No 4
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=100.00 E-value=1.8e-45 Score=318.85 Aligned_cols=139 Identities=27% Similarity=0.531 Sum_probs=108.4
Q ss_pred cccCCCCchHHHHHhcChhHHhhcchhhHHHhccchhceeeEccCC-CceEEEEEeCCCCcccCceEEEEEEEecCCcee
Q 027051 3 NEEKGVPNFWLTAMKNNSLLAQEITKADEEALKYLIDIKSSRLVCC-PEFKLEFFFGPNPYFKNYVLAKKFIMIDEVKLI 81 (229)
Q Consensus 3 e~i~~IP~FW~~vl~N~~~l~~~I~~~De~iL~~L~dI~ve~~~d~-~~f~l~F~F~~NpYF~N~vLtK~y~~~~~~~~~ 81 (229)
++|+|||+||++||+||+.++.+|+++|+++|+||+||+|++.+++ .||+|+|+|++||||+|++|||+|++..+|++
T Consensus 73 eII~~IP~FW~tal~n~~~l~~~i~e~De~iL~~L~dI~v~~~~d~~~gf~i~F~F~~N~yF~N~vLtK~y~~~~~g~~- 151 (225)
T 2e50_A 73 ELIAKIPNFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHMNESGDP- 151 (225)
T ss_dssp HHHTTSTTHHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEEEC--------
T ss_pred HHHhccccHHHHHHhcChhhhhhccHhHHHHHHhcCeeEEEEccCCCCceEEEEEeCCCCCccCCEEEEEEEecCCCCc-
Confidence 5789999999999999999999999999999999999999998765 49999999999999999999999999988877
Q ss_pred eeceeeceeeeecCCCcccccccCCC----------CcccccccccCCCCCCCccccHHHHHhhhhhhHHHHHhhhcccc
Q 027051 82 FDEAIGSKIKWYPEKCLTRECSTRKP----------KKSFFNFFKSLEFPFYDESIDVKLLHQLEHDYKIGVTIKKEIVC 151 (229)
Q Consensus 82 ~~~~~~t~I~Wk~gkdlt~~~~~kk~----------~~SFF~fF~~~~~p~~~~~~dee~~~~l~~D~eig~~i~d~IiP 151 (229)
+++||+|+||+|+|+|++..++++ ..|||+||+++..|+ +++||++|+++|||
T Consensus 152 --~s~~t~I~Wk~gkd~t~~~~~kk~~~~~~r~~~~~~SFF~fF~~~~~~~---------------~~eige~ikd~i~P 214 (225)
T 2e50_A 152 --SSKSTEIKWKSGKDMTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDAG---------------ADELGEVIKDDIWP 214 (225)
T ss_dssp --CEEECCCCBCSSCCC----------------------CGGGGC---------------------CHHHHHHHHHTTTT
T ss_pred --ccCCCcceecCCCCccchhhhhcccccCcccCCCCCCcceecCCCCCCc---------------hhHHHHHHHhCccc
Confidence 689999999999999988654432 249999999986553 24899999999999
Q ss_pred chhhhhcc
Q 027051 152 HAISWFCG 159 (229)
Q Consensus 152 ~al~yy~g 159 (229)
+||.||+-
T Consensus 215 ~av~yy~~ 222 (225)
T 2e50_A 215 NPLQYYLV 222 (225)
T ss_dssp CSHHHHCC
T ss_pred cHHHHhcC
Confidence 99999983
No 5
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=100.00 E-value=4.3e-45 Score=309.97 Aligned_cols=140 Identities=20% Similarity=0.389 Sum_probs=114.5
Q ss_pred cccCCCCchHHHHHhcChhHHhhcchhhHHHhccchhceeeEccC-CCceEEEEEeCC--CCcccCceEEEEEEEecCCc
Q 027051 3 NEEKGVPNFWLTAMKNNSLLAQEITKADEEALKYLIDIKSSRLVC-CPEFKLEFFFGP--NPYFKNYVLAKKFIMIDEVK 79 (229)
Q Consensus 3 e~i~~IP~FW~~vl~N~~~l~~~I~~~De~iL~~L~dI~ve~~~d-~~~f~l~F~F~~--NpYF~N~vLtK~y~~~~~~~ 79 (229)
++|++||+||++||+|||+++.++ +.|+++|+||+||+|++..+ +.||+|+|+|++ ||||+|++|||+|++..+|.
T Consensus 43 ~iI~~IP~FW~t~l~n~~~ls~i~-~~De~~L~~L~di~v~~~~~~~~gf~i~F~F~~n~N~yF~N~vLtK~y~~~~~g~ 121 (193)
T 3kyp_A 43 EIIQKIPGFWANTLRKHPALSDIV-PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDNNQE 121 (193)
T ss_dssp HHHHTSTTTTHHHHTTSSSSTTSS-CHHHHTTCCCCEECCBCCSSSSCCCEEEEECSCCSSCSCSCEEEECCCCCC----
T ss_pred HHhcCCccHHHHHHHcCchHHHHH-HhhHHHHcCcceEEEEEccCCCCceEEEEEEcCCCCccccCceEEEEEEEcCCCC
Confidence 578899999999999999999865 79999999999999998755 459999999998 89999999999999988776
Q ss_pred eeeeceeeceeeeecCCCcccccccCCC-------CcccccccccCCCCCCCccccHHHHHhhhhhhHHHHHhhhccccc
Q 027051 80 LIFDEAIGSKIKWYPEKCLTRECSTRKP-------KKSFFNFFKSLEFPFYDESIDVKLLHQLEHDYKIGVTIKKEIVCH 152 (229)
Q Consensus 80 ~~~~~~~~t~I~Wk~gkdlt~~~~~kk~-------~~SFF~fF~~~~~p~~~~~~dee~~~~l~~D~eig~~i~d~IiP~ 152 (229)
+ .++||+|+||+|+|+|+++.++|+ ..||||||+++..|++ ++||++|+++|||+
T Consensus 122 ~---~~~~t~I~Wk~gk~~t~~~~~kr~~~~~~~~~~SFF~wF~~~~~~~~---------------~eige~ikd~i~P~ 183 (193)
T 3kyp_A 122 K---VVECTRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFEWFTTDELQDK---------------PDVGELIRREIWHN 183 (193)
T ss_dssp C---CCCCCCCCCCSSCCCCC--------------CCCTTTTCCSSCCTTT---------------TCTTHHHHTTTTTC
T ss_pred e---eeccceeeeecCCCcchhhhhccccccccCCcchHhhhcCCCCcCCc---------------hHHHHHHHhCeeeC
Confidence 5 368999999999999987766554 2599999999887654 48999999999999
Q ss_pred hhhhhcccc
Q 027051 153 AISWFCGDA 161 (229)
Q Consensus 153 al~yy~g~~ 161 (229)
||+||+|+.
T Consensus 184 ~l~yy~ge~ 192 (193)
T 3kyp_A 184 PLSYYLGLE 192 (193)
T ss_dssp HHHHHC---
T ss_pred HHHHhCCCC
Confidence 999999974
No 6
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=99.30 E-value=7.3e-13 Score=123.40 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=55.5
Q ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhcccc
Q 027051 169 RKIEYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQPLDTKVSY 226 (229)
Q Consensus 169 ~~~~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~pl~~~r~~ 226 (229)
..+||..+||+.|++||.||++||.+|++|+++|.+|+.+||+||.++|+|||.||+.
T Consensus 80 ~~~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PLy~KR~e 137 (417)
T 2ayu_A 80 QDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSR 137 (417)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3488999999999999999999999999999999999999999999999999999974
No 7
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=99.28 E-value=2.5e-12 Score=117.50 Aligned_cols=57 Identities=14% Similarity=0.091 Sum_probs=51.6
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhccccc
Q 027051 171 IEYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQPLDTKVSYH 227 (229)
Q Consensus 171 ~~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~pl~~~r~~~ 227 (229)
.++..+||+.|++||++|++||.++++|+++|.+|+.+||+||.+||+|||.||+..
T Consensus 41 ~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qPLyeKR~eI 97 (359)
T 3fs3_A 41 DDKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREA 97 (359)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999999999999853
No 8
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=99.09 E-value=7.2e-11 Score=101.87 Aligned_cols=56 Identities=27% Similarity=0.296 Sum_probs=51.3
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhcccc
Q 027051 171 IEYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQPLDTKVSY 226 (229)
Q Consensus 171 ~~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~pl~~~r~~ 226 (229)
.|.....++++++||++|++||.++++|+++|.+|+.+||+||.++|+|||.||+.
T Consensus 18 ~~~~~~~~~~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~e 73 (225)
T 2e50_A 18 DGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSE 73 (225)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 56777899999999999999999999999999999999999999999999999974
No 9
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=80.15 E-value=3 Score=27.46 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 027051 188 LRKIEIELNKLEAEFLEKRRKEEANYVKLCQPLDT 222 (229)
Q Consensus 188 l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~pl~~ 222 (229)
+.+||....-|...+..|+.+|...|+.+=||+..
T Consensus 12 ~eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIld 46 (51)
T 2jo8_A 12 VEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILD 46 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHH
Confidence 34667777888999999999999999999999854
No 10
>2q2f_A Selenoprotein S; anti-parallel coiled-coil, endoplasmic reticulum, membrane, selenocysteine, transmembrane, structural genomics; HET: MSE; 1.50A {Homo sapiens}
Probab=58.49 E-value=21 Score=25.92 Aligned_cols=36 Identities=28% Similarity=0.330 Sum_probs=31.0
Q ss_pred cchhhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Q 027051 177 AAGNLVQKIESLR----KIEIELNKLEAEFLEKRRKEEAN 212 (229)
Q Consensus 177 l~~~v~~~~~~l~----~~q~~~~~~~~~~~~e~~~le~~ 212 (229)
-|..|.+|-+||. ..|++.|..-++|.++...||..
T Consensus 38 dPd~vv~RQEAl~aaRlRMQEeldAqAe~~keKQkqlEEe 77 (89)
T 2q2f_A 38 EPDVVVKRQEALAAARLKMQEELNAQVEKHKEKLKQLEEE 77 (89)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999884 68999999999999999988864
No 11
>1z8u_A Alpha-hemoglobin stabilizing protein; alpha haemoglobin, AHSP, oxidation, interaction, electron transport; HET: HEM; 2.40A {Homo sapiens} SCOP: a.7.11.1 PDB: 1y01_A* 1w0b_A 3ovu_A* 1w09_A 1w0a_A 3ia3_A* 1xzy_A
Probab=53.19 E-value=34 Score=25.16 Aligned_cols=48 Identities=25% Similarity=0.379 Sum_probs=34.1
Q ss_pred HHhhhccccchhhhhccccCCccccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027051 143 VTIKKEIVCHAISWFCGDATCGRRTKRKIEYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKR 206 (229)
Q Consensus 143 ~~i~d~IiP~al~yy~g~~~~~~d~~~~~~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~ 206 (229)
.++.++.+-.-+.||.....+ +...|-.||++||.+.+-|-+.|+.+-
T Consensus 38 vtvV~DWvnfYinyy~~~~~G----------------eqqEqdrAlqel~qeL~tl~~pFL~KY 85 (102)
T 1z8u_A 38 VTVVEDWMNFYINYYRQQVTG----------------EPQERDKALQELRQELNTLANPFLAKY 85 (102)
T ss_dssp HHHHHHHHHHHHHHHTTTCCS----------------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc----------------cHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 345566555567777765444 345566799999999999999998543
No 12
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=52.01 E-value=15 Score=24.89 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027051 179 GNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLC 217 (229)
Q Consensus 179 ~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~ 217 (229)
.....||+.|-..+++ ..|..+=.+|+++|.+.|.+-+
T Consensus 4 ~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~f 41 (60)
T 3bhp_A 4 NAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGF 41 (60)
T ss_dssp HHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH
Confidence 4578899999999987 7888888899999999998754
No 13
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=50.49 E-value=24 Score=26.00 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=25.8
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027051 171 IEYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKRRKE 209 (229)
Q Consensus 171 ~~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~l 209 (229)
.++...||++.|++ .||...++|+.+..+|..+-
T Consensus 5 ~~d~s~LPpeqRkk-----kL~~Ki~el~~ei~ke~~~r 38 (98)
T 2ke4_A 5 TEDFSHLPPEQQRK-----RLQQQLEERSRELQKEVDQR 38 (98)
T ss_dssp CSCSSSSCHHHHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred chhhccCCHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 34567899998874 68888888888887776553
No 14
>2jvd_A UPF0291 protein YNZC; solution structure, construct optimization, cytoplasm, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis}
Probab=48.13 E-value=17 Score=24.15 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027051 179 GNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLC 217 (229)
Q Consensus 179 ~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~ 217 (229)
.....||+.|-..+++ ..|..+=.+|+++|.+.|.+-+
T Consensus 4 ~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~f 41 (54)
T 2jvd_A 4 NAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGF 41 (54)
T ss_dssp HHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH
Confidence 4568899999999987 7888888899999999998765
No 15
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=42.17 E-value=43 Score=26.78 Aligned_cols=45 Identities=16% Similarity=0.209 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhccc
Q 027051 181 LVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQPLDTKVS 225 (229)
Q Consensus 181 v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~pl~~~r~ 225 (229)
+..-+..+..+|.+..++++..-.|+.++.++|.+.-.||-.+..
T Consensus 18 ~~~alr~ia~l~r~~~~i~~~~n~eI~~ik~~~~~~~~~l~~~i~ 62 (171)
T 2p2u_A 18 AEGALAEIATIDRKVGEIEAQMNEAIDAAKARASQKSAPLLARRK 62 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556677889999999999999999999999999999876544
No 16
>2hep_A UPF0291 protein YNZC; SR384, structure, autostructure, northeast structural genomics consortium, PSI-1, protein structure initiative, NESG; NMR {Bacillus subtilis} SCOP: a.2.21.1
Probab=37.62 E-value=32 Score=24.78 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=32.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027051 179 GNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLC 217 (229)
Q Consensus 179 ~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~ 217 (229)
.....||+.|-..+++ ..|..+=.+|+++|...|.+-+
T Consensus 4 ~~~i~RINeLakK~K~-~GLT~eEk~EQ~~LR~eYl~~f 41 (85)
T 2hep_A 4 NAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGF 41 (85)
T ss_dssp SHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH
Confidence 3578899999999988 7888888899999999998755
No 17
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=32.91 E-value=99 Score=22.38 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 027051 199 EAEFLEKRRKEEANYVKLCQ 218 (229)
Q Consensus 199 ~~~~~~e~~~le~~y~~~~~ 218 (229)
-+.+..|+.++-.||.+||.
T Consensus 71 ~~~~~~e~d~~k~k~~~L~~ 90 (90)
T 2wt7_B 71 VSRLARERDAYKVKSEKLAN 90 (90)
T ss_dssp HHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45678899999999999873
No 18
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=31.26 E-value=57 Score=18.88 Aligned_cols=26 Identities=15% Similarity=0.248 Sum_probs=18.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHH
Q 027051 177 AAGNLVQKIESLRKIEIELNKLEAEF 202 (229)
Q Consensus 177 l~~~v~~~~~~l~~~q~~~~~~~~~~ 202 (229)
|..++|+--...++||+..|.||.--
T Consensus 4 lee~~r~l~~ivq~lq~r~drle~tv 29 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLEETV 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666788898888887643
No 19
>1kil_E Complexin I snare-complex binding region; helix bound to four helix bundle, membrane protein; 2.30A {Rattus norvegicus} SCOP: h.1.15.1
Probab=30.74 E-value=1.1e+02 Score=19.67 Aligned_cols=38 Identities=18% Similarity=0.102 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 027051 180 NLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLC 217 (229)
Q Consensus 180 ~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~ 217 (229)
....|++||++-.+.+.+-..++..||..+...-...|
T Consensus 10 ~e~E~~eAlreaEe~Rk~Kh~kmE~eRE~mRq~IRdKY 47 (49)
T 1kil_E 10 KEEERQEALRQAEEERKAKYAKMEAEREVMRQGIRDKY 47 (49)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44678999999999999999999999888777666555
No 20
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=30.42 E-value=68 Score=27.87 Aligned_cols=32 Identities=6% Similarity=0.256 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027051 180 NLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVK 215 (229)
Q Consensus 180 ~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~ 215 (229)
-++.|+..-+.+-++. +.|.+||+++|..|.+
T Consensus 47 iL~~Rl~~~k~i~keL----~~f~kERa~IEe~Yak 78 (287)
T 3g9g_A 47 TIRIRLSQVKLLNKDF----YLLFKELANLKRNYAQ 78 (287)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 4677777555554433 4678888888888874
No 21
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=29.64 E-value=1.4e+02 Score=21.36 Aligned_cols=41 Identities=27% Similarity=0.285 Sum_probs=24.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 027051 179 GNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQP 219 (229)
Q Consensus 179 ~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~p 219 (229)
+.+..|++.|..--+...+-...-.++..+|++++..++++
T Consensus 73 ~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~~~~~ 113 (117)
T 2zqm_A 73 AELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQSALRP 113 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 45666776665555544444555566666777777666654
No 22
>3rk3_E Complexin-1; snare proteins, membrane fusion, membrane protein-exocytosis transport protein complex, membrane protein-exocytosis COMP; 3.50A {Homo sapiens} PDB: 3rl0_g
Probab=28.82 E-value=1.3e+02 Score=20.13 Aligned_cols=41 Identities=20% Similarity=0.123 Sum_probs=32.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027051 178 AGNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQ 218 (229)
Q Consensus 178 ~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~ 218 (229)
......|.+||++-.+.+.+-..++..||..+...-...|.
T Consensus 11 ~kke~E~~eAlrq~Ee~Rk~Kh~kME~ERE~mRQ~IRdKY~ 51 (63)
T 3rk3_E 11 AKKFEEAQEALRQAEEERKAKYAKMEAEREAVRQGIRDKYG 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567789999999999988888999998887776666553
No 23
>1xpp_A TA1416, DNA-directed RNA polymerase subunit L; structural genomics, protein structure initiative, MCSG; 1.60A {Thermoplasma acidophilum} SCOP: d.74.3.2
Probab=24.94 E-value=1e+02 Score=23.21 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=40.2
Q ss_pred hhHHHHHhhhccccchhhhhccccCC---cccccccc-ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027051 138 DYKIGVTIKKEIVCHAISWFCGDATC---GRRTKRKI-EYDNPAAGNLVQKIESLRKIEIELNKLEAEFLEKRRKEE 210 (229)
Q Consensus 138 D~eig~~i~d~IiP~al~yy~g~~~~---~~d~~~~~-~~~~~l~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le 210 (229)
|--+|-.|+..|.-+|==-|.|=..+ ...--=-. -+... |.++. .+||+.|.+..+.+..+|.+++....
T Consensus 31 DHTLgNlLr~~Llkdp~V~fAgY~vpHPle~~~~lrIqT~~~~-p~eaL--~~al~~L~~~~~~l~~~f~~a~~~~~ 104 (115)
T 1xpp_A 31 DNTLLRTLVEEILKDDQVDEARYYIKHPVIDNPQIYVRVKSGK-PQSAI--KRAVRKLSKLYEDLGTQFQKEFQRYE 104 (115)
T ss_dssp CHHHHHHHHHHHTTCTTEEEEEEECSSTTTSCCEEEEEESSSC-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHhcCCCeEEEEeecCCCCCCccEEEEEeCCCC-hHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44678787777766554333331111 11000000 01122 55554 46999999999999999999777553
No 24
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=24.02 E-value=80 Score=27.37 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHh
Q 027051 201 EFLEKRRKEEANYVKL 216 (229)
Q Consensus 201 ~~~~e~~~le~~y~~~ 216 (229)
.|.+||+++|..|.+-
T Consensus 50 ~f~keRa~IE~eYak~ 65 (350)
T 3aco_A 50 NCLHERARIEKAYAQQ 65 (350)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5666666666666543
No 25
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=23.33 E-value=1.1e+02 Score=22.03 Aligned_cols=27 Identities=7% Similarity=0.151 Sum_probs=20.9
Q ss_pred cccCCCcchhhHHHHHHHHHHHHHHHH
Q 027051 171 IEYDNPAAGNLVQKIESLRKIEIELNK 197 (229)
Q Consensus 171 ~~~~~~l~~~v~~~~~~l~~~q~~~~~ 197 (229)
.++.++||.+++++++-+|+|-.+..+
T Consensus 10 ld~ie~LP~El~r~~~~irelD~~~~~ 36 (104)
T 4afl_A 10 LDSIENLPFELQRNFQLMRDLDQRTED 36 (104)
T ss_dssp HHSGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999998876554433
No 26
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=22.84 E-value=88 Score=26.80 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHh
Q 027051 201 EFLEKRRKEEANYVKL 216 (229)
Q Consensus 201 ~~~~e~~~le~~y~~~ 216 (229)
.|.+||+++|..|.+-
T Consensus 41 ~f~keRa~iE~eYak~ 56 (337)
T 2x3v_A 41 SCVQERAKIEKAYAQQ 56 (337)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555555555543
No 27
>1l4a_E Synaphin A; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=21.18 E-value=87 Score=21.99 Aligned_cols=41 Identities=12% Similarity=0.038 Sum_probs=19.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 027051 178 AGNLVQKIESLRKIEIELNKLEAEFLEKRRKEEANYVKLCQ 218 (229)
Q Consensus 178 ~~~v~~~~~~l~~~q~~~~~~~~~~~~e~~~le~~y~~~~~ 218 (229)
......|++||++-.+.+.+-..++..||..+...-...|.
T Consensus 15 ~k~~~E~~eAlrqaEE~Rk~Kh~kmE~ERE~mRq~IRdKY~ 55 (79)
T 1l4a_E 15 EEEAAAIEEARREAEERRKEKHRKMEEEREEMRQTIRDKYG 55 (79)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34456789999999888888888888888877766655553
No 28
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=21.10 E-value=53 Score=27.89 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHH
Q 027051 201 EFLEKRRKEEANYVK 215 (229)
Q Consensus 201 ~~~~e~~~le~~y~~ 215 (229)
.|.+||+++|..|.+
T Consensus 50 ~f~keRa~iE~eYak 64 (312)
T 3abh_A 50 NCLHERARIEKAYAQ 64 (312)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566666666666654
No 29
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=20.53 E-value=56 Score=26.91 Aligned_cols=19 Identities=26% Similarity=0.471 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 027051 200 AEFLEKRRKEEANYVKLCQ 218 (229)
Q Consensus 200 ~~~~~e~~~le~~y~~~~~ 218 (229)
..|.+||+++|..|.+--+
T Consensus 38 ~~f~~eRa~iE~eYak~L~ 56 (276)
T 2v0o_A 38 ADFVRERATIEEAYSRSMT 56 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3677777777777766433
No 30
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=20.08 E-value=22 Score=29.84 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=1.0
Q ss_pred ceeeceeeeecCCCcc
Q 027051 84 EAIGSKIKWYPEKCLT 99 (229)
Q Consensus 84 ~~~~t~I~Wk~gkdlt 99 (229)
...+|+|+|++|.++-
T Consensus 224 ~~~~cp~~W~~g~~~~ 239 (254)
T 3tjj_A 224 HGEVAPAGWKPGSETI 239 (254)
T ss_dssp HC--------------
T ss_pred cCccccCCCCCCCcee
Confidence 4679999999997653
Done!