Query 027054
Match_columns 229
No_of_seqs 118 out of 1172
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:32:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhi_A Cathepsin B-like cystei 100.0 7.4E-52 2.5E-56 362.5 17.1 204 5-215 103-318 (325)
2 3cbj_A Cathepsin B; cathepsin 100.0 1.7E-50 5.8E-55 345.4 16.8 208 4-213 37-261 (266)
3 3pbh_A Procathepsin B; thiol p 100.0 3.3E-50 1.1E-54 351.2 16.5 205 5-211 95-316 (317)
4 8pch_A Cathepsin H; hydrolase, 100.0 3.4E-49 1.2E-53 328.5 15.8 185 4-210 28-219 (220)
5 3qsd_A Cathepsin B-like peptid 100.0 1.3E-48 4.4E-53 331.7 18.5 203 5-210 34-254 (254)
6 2xu3_A Cathepsin L1; hydrolase 100.0 2.1E-48 7.3E-53 323.8 17.7 183 5-208 28-219 (220)
7 3i06_A Cruzipain; autocatalyti 100.0 3.9E-48 1.3E-52 321.2 18.5 182 5-209 28-214 (215)
8 1m6d_A Cathepsin F, catsf; pap 100.0 1.4E-48 4.9E-53 323.6 15.4 180 5-209 28-213 (214)
9 3kwz_A Cathepsin K; enzyme inh 100.0 3E-48 1E-52 321.7 16.0 181 4-208 27-214 (215)
10 3qt4_A Cathepsin-L-like midgut 100.0 4.1E-48 1.4E-52 339.1 16.3 182 5-208 142-328 (329)
11 3ovx_A Cathepsin S; hydrolase, 100.0 5.5E-48 1.9E-52 320.8 15.6 183 4-208 28-217 (218)
12 2b1m_A SPE31; papain-like, sug 100.0 1.1E-47 3.8E-52 324.4 17.4 187 4-215 28-230 (246)
13 1deu_A Procathepsin X; cystein 100.0 4.6E-48 1.6E-52 332.0 14.0 195 4-211 68-277 (277)
14 3p5u_A Actinidin; SAD, cystein 100.0 1.6E-47 5.5E-52 318.5 15.8 185 4-211 27-219 (220)
15 3f5v_A DER P 1 allergen; aller 100.0 1.2E-47 3.9E-52 319.7 14.9 179 4-208 36-221 (222)
16 1ppo_A Protease omega; hydrola 100.0 2.4E-47 8.3E-52 316.6 16.2 180 4-208 27-214 (216)
17 2o6x_A Procathepsin L1, secret 100.0 9.7E-48 3.3E-52 334.7 14.4 183 5-209 119-306 (310)
18 1iwd_A Ervatamin B; cysteine p 100.0 3.4E-47 1.2E-51 315.5 17.0 178 4-208 27-213 (215)
19 1cqd_A Protein (protease II); 100.0 2.6E-47 8.9E-52 317.5 15.7 179 4-208 29-216 (221)
20 1xkg_A DER P I, major mite fec 100.0 2.6E-47 8.8E-52 331.9 15.9 182 5-213 117-306 (312)
21 1yal_A Chymopapain; hydrolase, 100.0 4E-47 1.4E-51 315.8 15.9 180 4-208 27-214 (218)
22 3u8e_A Papain-like cysteine pr 100.0 4.9E-47 1.7E-51 316.0 15.8 179 4-208 27-218 (222)
23 1s4v_A Cysteine endopeptidase; 100.0 6.4E-47 2.2E-51 316.7 16.4 187 5-214 29-224 (229)
24 1cs8_A Human procathepsin L; p 100.0 2E-47 6.8E-52 333.5 13.6 183 5-208 124-315 (316)
25 3qj3_A Cathepsin L-like protei 100.0 4.6E-47 1.6E-51 332.9 15.5 180 5-208 143-330 (331)
26 2c0y_A Procathepsin S; proenzy 100.0 3.1E-47 1.1E-51 332.1 14.0 181 5-208 126-314 (315)
27 1by8_A Protein (procathepsin K 100.0 3.4E-47 1.1E-51 331.8 12.2 180 5-208 127-313 (314)
28 2cio_A Papain; hydrolase/inhib 100.0 3.2E-46 1.1E-50 309.1 17.3 175 5-208 28-210 (212)
29 3pdf_A Cathepsin C, dipeptidyl 100.0 2E-46 6.7E-51 339.2 17.4 186 5-213 237-439 (441)
30 3ioq_A CMS1MS2; caricaceae, cy 100.0 1.6E-46 5.5E-51 311.0 15.1 177 4-208 27-210 (213)
31 2fo5_A Cysteine proteinase EP- 100.0 2E-46 6.7E-51 319.2 15.5 189 5-214 31-229 (262)
32 2bdz_A Mexicain; cysteine prot 100.0 4.8E-46 1.6E-50 308.4 17.1 177 4-209 27-211 (214)
33 1o0e_A Ervatamin C; plant cyst 100.0 5.4E-46 1.9E-50 306.9 17.0 172 5-208 28-206 (208)
34 2oul_A Falcipain 2; cysteine p 100.0 2.3E-46 7.9E-51 315.6 14.7 179 4-208 44-239 (241)
35 1pci_A Procaricain; zymogen, h 100.0 2.2E-46 7.6E-51 327.5 13.7 179 5-208 134-320 (322)
36 3f75_A Toxopain-2, cathepsin L 100.0 2.7E-46 9.3E-51 311.7 13.5 182 4-208 33-223 (224)
37 3bwk_A Cysteine protease falci 100.0 3.5E-46 1.2E-50 314.8 14.0 179 4-208 46-241 (243)
38 3tnx_A Papain; hydrolase, cyto 100.0 8E-44 2.7E-48 314.8 15.0 174 6-208 180-361 (363)
39 2wbf_X Serine-repeat antigen p 100.0 5.1E-43 1.7E-47 298.8 16.7 204 5-214 37-263 (265)
40 3ois_A Cysteine protease; alph 100.0 1.1E-39 3.7E-44 281.9 9.5 180 4-194 80-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 6.2E-30 2.1E-34 230.6 8.7 99 115-218 309-432 (453)
42 2e01_A Cysteine proteinase 1; 100.0 6E-29 2E-33 224.4 11.5 98 115-217 313-432 (457)
43 3pw3_A Aminopeptidase C; bleom 99.9 8.1E-24 2.8E-28 187.2 11.5 204 6-216 38-374 (383)
44 1pxv_A Cysteine protease; hydr 96.6 0.023 7.8E-07 44.4 10.3 66 113-196 98-164 (183)
45 1cv8_A Staphopain; cysteine pr 96.4 0.074 2.5E-06 41.4 11.9 103 20-194 51-153 (174)
46 1x9y_A Cysteine proteinase; ha 95.7 0.14 5E-06 44.1 12.0 68 113-198 274-342 (367)
47 3erv_A Putative C39-like pepti 93.4 0.16 5.5E-06 41.7 6.5 61 112-179 130-196 (236)
48 1dki_A Pyrogenic exotoxin B zy 86.0 1.9 6.4E-05 37.7 7.1 63 114-200 289-352 (371)
49 3bb7_A Interpain A; cysteine p 85.3 1.6 5.6E-05 37.3 6.2 60 115-193 239-298 (321)
50 4d8b_A Streptopain; papain fol 82.7 2.3 8E-05 35.3 5.9 56 114-193 171-226 (261)
51 2r9f_A Calpain-1 catalytic sub 47.5 62 0.0021 27.5 7.6 28 154-181 245-275 (339)
52 2nqa_A Calpain 8; calpain, cal 36.9 1E+02 0.0035 25.9 7.3 28 154-181 240-270 (326)
53 1ziv_A Calpain 9; cysteine pro 28.8 98 0.0034 26.2 5.9 28 154-181 244-274 (339)
54 3bow_A Calpain-2 catalytic sub 25.4 1.8E+02 0.0063 27.1 7.6 28 154-181 260-290 (714)
55 1y08_A Hypothetical protein SP 23.3 1E+02 0.0035 26.1 4.7 61 115-193 221-282 (323)
No 1
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=7.4e-52 Score=362.52 Aligned_cols=204 Identities=46% Similarity=0.955 Sum_probs=169.1
Q ss_pred hchHHHHhccc-cccCC-CCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCC-CCCCCCC-------
Q 027054 5 RTNRDALSSSP-YVSLQ-NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYF-DSTGCSH------- 74 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~-~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~-~~~~~~~------- 74 (229)
-|+..|||+.. ++++. .++||||+|+||+. ..+.||+||++..||+|++++|+++|++|||. +. |.+
T Consensus 103 Fsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~-~~~~GC~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~--c~~~~~~~~~ 179 (325)
T 3hhi_A 103 VAAASAMSDRFCTMGGVQDVHISAGDLLACCS-DCGDGCNGGDPDRAWAYFSSTGLVSDYCQPYPFPH--CSHHSKSKNG 179 (325)
T ss_dssp HHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCG-GGBCTTBCBCHHHHHHHHHHTCBCBTTTSCCSSCC--CBSSSCCTTC
T ss_pred HHHHHHHHHHHHHHhCCCccccCHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHhCCCcccccCCcccc--cccccccccc
Confidence 35667777755 44665 89999999999997 24689999999999999999999999999996 33 332
Q ss_pred -CCCC-CCCCCcccccccccccccccccceeEeeeEEeCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCc
Q 027054 75 -PGCE-PAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDV 152 (229)
Q Consensus 75 -~~c~-~~~~~~~~~~~c~~~~~~~~~~~~~~i~~y~~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~ 152 (229)
..|. +...++.|...|... .+...+.+.+..|.+ .++++||++|+++|||+|+|.++++|++|++|||..+++..
T Consensus 180 ~~~C~~~~~~~~~c~~~c~~~--~~~~~~~~~~~~y~v-~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~~~~~~ 256 (325)
T 3hhi_A 180 YPPCSQFNFDTPKCDYTCDDP--TIPVVNYRSWTSYAL-QGEDDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQY 256 (325)
T ss_dssp CCBGGGCCCCCCCCCSSCSST--TSCCCCBCEEEEEEE-CSHHHHHHHHHHHCCEEEEEEEEHHHHTCCSSEECCCSCCE
T ss_pred CCCCCCcccCCcchhhccccc--ccccceEEeecceEe-CCHHHHHHHHHHCCCEEEEEEeccccccccCceecCCCCCC
Confidence 4455 345566777777632 234455667788888 88899999999999999999999999999999998887776
Q ss_pred cCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCchh
Q 027054 153 MGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLV 215 (229)
Q Consensus 153 ~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~~~ 215 (229)
.++|||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++|.+++..
T Consensus 257 ~~~HaV~iVGyG-~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g~p~~~~~~ 318 (325)
T 3hhi_A 257 LGGHAVRLVGWG-TSNGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAGIPLAPNTA 318 (325)
T ss_dssp EEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEEEEC-----
T ss_pred CCCEEEEEEEEE-ecCCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEeecCCCCcc
Confidence 679999999999 78899999999999999999999999999999999999999999998753
No 2
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.7e-50 Score=345.38 Aligned_cols=208 Identities=46% Similarity=1.053 Sum_probs=168.5
Q ss_pred hhchHHHHhccccc-cC--CCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccC-------CCCccCCCCCCC-
Q 027054 4 TRTNRDALSSSPYV-SL--QNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVT-------EECDPYFDSTGC- 72 (229)
Q Consensus 4 ~~~~~~a~~s~~~~-~~--~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~-------e~~~PY~~~~~~- 72 (229)
+-|++.+||+.... ++ ..++||||+|+||+....+.||+||++..||+|++++|+++ |++|||... .|
T Consensus 37 Afa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~y~~~~Gi~~~~~Y~~~e~~~PY~~~-~~~ 115 (266)
T 3cbj_A 37 AFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIP-PCE 115 (266)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHHHHHHHHHTCBCBCCSTTCCCSSSCCCSC-CCS
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHHHHHHHHHhCcCcCccccccccccCcccc-ccc
Confidence 34666777776543 43 57999999999999522368999999999999999999999 999999742 12
Q ss_pred -----CCCCCCCCCCCccccccccccc-ccccccceeEeeeEEeCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEE
Q 027054 73 -----SHPGCEPAYPTPKCVRKCVKKN-QLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK 146 (229)
Q Consensus 73 -----~~~~c~~~~~~~~~~~~c~~~~-~~~~~~~~~~i~~y~~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~ 146 (229)
....|.....++.|...|.... ..+...+.+.+..|.++.++++||++|+++|||+++|.+.++|+.|++|||.
T Consensus 116 ~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~ 195 (266)
T 3cbj_A 116 AHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ 195 (266)
T ss_dssp CCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSCCEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEEC
T ss_pred ccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeeeeEEeCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEe
Confidence 1245655455667777775321 1122233445556667788899999999999999999998899999999998
Q ss_pred ccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCc
Q 027054 147 HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKN 213 (229)
Q Consensus 147 ~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~ 213 (229)
..++...++|||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++|.+.+
T Consensus 196 ~~~~~~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgI~~~~~~~~p~~~~ 261 (266)
T 3cbj_A 196 HVTGEMMGGHAIRILGWG-VENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQ 261 (266)
T ss_dssp CCSSCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCCCC
T ss_pred cCCCCccCCeEEEEEEec-ccCCceEEEEEcCCCCccCCCCEEEEEcCCCcccccCceEEEEeeccc
Confidence 876666679999999999 678899999999999999999999999999999999999999998765
No 3
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=3.3e-50 Score=351.24 Aligned_cols=205 Identities=47% Similarity=1.036 Sum_probs=169.6
Q ss_pred hchHHHHhcccc-ccC--CCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCc-------cCCCCCCC--
Q 027054 5 RTNRDALSSSPY-VSL--QNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD-------PYFDSTGC-- 72 (229)
Q Consensus 5 ~~~~~a~~s~~~-~~~--~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~-------PY~~~~~~-- 72 (229)
-|+..|||+... +++ ..++||+|+|+||+....+.||+||++..||+|++++|+++|+.| ||... .|
T Consensus 95 Fsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~Gi~te~~Y~~~~~c~PY~~~-~c~~ 173 (317)
T 3pbh_A 95 FGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIP-PCEH 173 (317)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHTCEEBBCSTTCCCBSSCCCSC-CCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCCcchhccCCCCCcCcccC-cccc
Confidence 456677777553 344 389999999999986335689999999999999999999999888 99753 22
Q ss_pred ----CCCCCCCCCCCcccccccccccc-cccccceeEeeeEEeCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEc
Q 027054 73 ----SHPGCEPAYPTPKCVRKCVKKNQ-LWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKH 147 (229)
Q Consensus 73 ----~~~~c~~~~~~~~~~~~c~~~~~-~~~~~~~~~i~~y~~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~ 147 (229)
..+.|.....++.|...|..... .+...+.+....|.++.++++||++|+++|||+|+|.++++|++|++|||..
T Consensus 174 ~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GVy~~ 253 (317)
T 3pbh_A 174 HVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQH 253 (317)
T ss_dssp CCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEEEEGGGGGEEEEEECC
T ss_pred cccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEEecccccCCCCcEEcc
Confidence 23456555566778777764432 2333444555566788889999999999999999999999999999999998
Q ss_pred cCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecC
Q 027054 148 ITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSS 211 (229)
Q Consensus 148 ~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~ 211 (229)
+++...++|||+||||| ++++.+|||||||||++||++|||||.|+.|.|||++.+++++|.+
T Consensus 254 ~~~~~~~~HaV~iVGyG-~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~p~~ 316 (317)
T 3pbh_A 254 VTGEMMGGHAIRILGWG-VENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRT 316 (317)
T ss_dssp CSCCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECCBCC
T ss_pred CCCCCCCCEEEEEEEEE-EeCCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeeecCC
Confidence 87777789999999999 7789999999999999999999999999999999999999999975
No 4
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=3.4e-49 Score=328.49 Aligned_cols=185 Identities=30% Similarity=0.610 Sum_probs=155.2
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..+||+.. +++++.++||||+|+||+....+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 28 Afa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 95 (220)
T 8pch_A 28 TFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQ------------ 95 (220)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccCC------------
Confidence 346677777765 44778999999999999964457899999999999999988 9999999999664
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCC---ccCCc
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD---VMGGH 156 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~---~~~~H 156 (229)
. ..|..... ...+.+..|. ++ .++++||++|+++|||+++|.+.++|+.|++|||..+.+. ..++|
T Consensus 96 -~----~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy~~~~~~~~~~~~~H 166 (220)
T 8pch_A 96 -D----DHCKFQPD----KAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNH 166 (220)
T ss_dssp -C----CCCCCCGG----GEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEECCSSCCCSTTTCCE
T ss_pred -C----CCCCCCCC----cceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcccCCcCCCCCCcCCc
Confidence 1 22332221 2345667777 54 5789999999999999999999889999999999876432 25799
Q ss_pred EEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeec
Q 027054 157 AVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPS 210 (229)
Q Consensus 157 av~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~ 210 (229)
||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++|.
T Consensus 167 aV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 167 AVLAVGYG-EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPL 219 (220)
T ss_dssp EEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEEC
T ss_pred EEEEEEEE-ccCCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEeec
Confidence 99999999 778999999999999999999999999999999999999998885
No 5
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.3e-48 Score=331.66 Aligned_cols=203 Identities=47% Similarity=0.971 Sum_probs=163.1
Q ss_pred hchHHHHhccccc-cC--CCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCc-------cCCCCCCCC-
Q 027054 5 RTNRDALSSSPYV-SL--QNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECD-------PYFDSTGCS- 73 (229)
Q Consensus 5 ~~~~~a~~s~~~~-~~--~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~-------PY~~~~~~~- 73 (229)
-|+..+||+.+.+ ++ ..++||||+|+||.. ..+.||+||++..||+|++++|+++|+.| ||... .|.
T Consensus 34 Faa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~-~~~~GC~GG~~~~a~~yi~~~Gi~~e~~y~~~~~c~PY~~~-~c~~ 111 (254)
T 3qsd_A 34 FGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCE-SCGLGCEGGILGPAWDYWVKEGIVTGSSKENHAGCEPYPFP-KCEH 111 (254)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCT-TSBCTTBCBCHHHHHHHHHHTCBCBCCCTTTCCSSSCCSSC-CCBC
T ss_pred HHHHHHHHHHHHHHhCCCccccCCHHHHHhhhc-CCCCCCCCCCHHHHHHHHHHcCCCcccccccCcCcCCcccc-cccc
Confidence 4566777776543 44 689999999999986 34689999999999999999999998887 99632 121
Q ss_pred -----CCCCCCC-CCCcccccccccccc-cccccceeEeeeEEeCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEE
Q 027054 74 -----HPGCEPA-YPTPKCVRKCVKKNQ-LWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYK 146 (229)
Q Consensus 74 -----~~~c~~~-~~~~~~~~~c~~~~~-~~~~~~~~~i~~y~~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~ 146 (229)
...|... ..++.|...|..... .+...+.+....|.++.++++||++|+++|||+++|.+.++|++|++|||.
T Consensus 112 ~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~ 191 (254)
T 3qsd_A 112 HTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYK 191 (254)
T ss_dssp SSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEEC
T ss_pred cccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecCCcHHHHHHHHHHcCCEEEEEEeccccccccCCeec
Confidence 1234321 124556667764322 133334444555677778999999999999999999999999999999999
Q ss_pred ccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeec
Q 027054 147 HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPS 210 (229)
Q Consensus 147 ~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~ 210 (229)
.+++...++|||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++|.
T Consensus 192 ~~~~~~~~~Hav~iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~rg~n~CgI~~~~~~~~p~ 254 (254)
T 3qsd_A 192 HITGETLGGHAIRIIGWG-VENKAPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVTAGRIN 254 (254)
T ss_dssp CCSSCEEEEEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSSEEEEECC
T ss_pred cCCCCCCCCeEEEEEEEe-ecCCeeEEEEEeCCCCCcccCCeEEEEcCCCeecCCCceEeeccC
Confidence 887766679999999999 778999999999999999999999999999999999999999983
No 6
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=2.1e-48 Score=323.79 Aligned_cols=183 Identities=27% Similarity=0.534 Sum_probs=151.4
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHH-HcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~-~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. +++++.++||+|+|+||.....+.||+||++..||+|++ +.|+++|++|||.+.
T Consensus 28 fa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~------------- 94 (220)
T 2xu3_A 28 FSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEAT------------- 94 (220)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHHTCEEBTTTSCCCSS-------------
T ss_pred HHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHhCCcccccccCCccc-------------
Confidence 45667777755 446788999999999999744478999999999999996 789999999999664
Q ss_pred CcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEcc-CCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHI-TGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~-~~~~~~~Hav~ 159 (229)
. ..|..... ...+++..|. ++.++++||++|+++|||+++|.+. ++|++|++|||..+ ++...++|||+
T Consensus 95 ~----~~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~ 166 (220)
T 2xu3_A 95 E----ESCKYNPK----YSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 166 (220)
T ss_dssp C----CCCCCCGG----GEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCSSCCCEEEE
T ss_pred C----cCccCCCC----CcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCCCCCCeEEE
Confidence 1 12332211 2346677777 6668899999999999999999997 58999999999876 44456899999
Q ss_pred EEEecc---cCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 160 LIGWGT---SDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~---~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|||||+ ++++++|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 167 iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~ 219 (220)
T 2xu3_A 167 VVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 219 (220)
T ss_dssp EEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred EEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeee
Confidence 999995 456889999999999999999999999997 8999999998654
No 7
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=3.9e-48 Score=321.20 Aligned_cols=182 Identities=27% Similarity=0.536 Sum_probs=149.4
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc---CccCCCCccCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH---GVVTEECDPYFDSTGCSHPGCEPA 80 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~---Gi~~e~~~PY~~~~~~~~~~c~~~ 80 (229)
-|++.+||+.. +++++.++||||+|+||+. .+.||+||++..||+|++++ |+++|++|||.....
T Consensus 28 fa~~~ale~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~~~gGi~~e~~yPY~~~~~--------- 96 (215)
T 3i06_A 28 FSAIGNVECQWFLAGHPLTNLSEQMLVSCDK--TDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEG--------- 96 (215)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS--SSCGGGCCCHHHHHHHHHHHSTTEEEC-CCSCCCCTTS---------
T ss_pred HHHHHHHHHHHHHhCCCCCccCHHHHhccCC--CCCCCCCCCHHHHHHHHHHhccccccccCccCCcCCCC---------
Confidence 45667777765 4466889999999999986 57899999999999999986 799999999965411
Q ss_pred CCCcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEE
Q 027054 81 YPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
..+.| ..... ...+++..|. ++.++++||++|+++|||+++|.+ ++|++|++|||... .....+|||+
T Consensus 97 -~~~~C----~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~-~~f~~Y~~Giy~~~-~~~~~~HaV~ 165 (215)
T 3i06_A 97 -ISPPC----TTSGH----TVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDA-SSWMTYTGGVMTSC-VSEQLDHGVL 165 (215)
T ss_dssp -CCCCC----CCSSC----CEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECC-TTGGGCCSSEECSC-CCSCCCEEEE
T ss_pred -CCCcc----ccCCc----ccceEecceEEeCChHHHHHHHHHHCCCEEEEEEc-hHHhcCCCCcccCC-CCCccCcEEE
Confidence 11223 32221 2346777777 777889999999999999999999 79999999999753 3344699999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEee
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 209 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p 209 (229)
||||| ++++++|||||||||++||++|||||+|+.|.|||++++++++.
T Consensus 166 iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 166 LVGYN-DSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp EEEEE-SSSSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred EEEEe-ccCCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 99999 77889999999999999999999999999999999999997653
No 8
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-48 Score=323.58 Aligned_cols=180 Identities=24% Similarity=0.505 Sum_probs=148.6
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. +++++.++||||+|+||.. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 28 fa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~i~~~~Gi~~e~~yPY~~~------------- 92 (214)
T 1m6d_A 28 FSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGH------------- 92 (214)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHHTCBCBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhcCcccccCcCcCCC-------------
Confidence 45666777754 4577889999999999996 46899999999999999986 8999999999654
Q ss_pred CcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEcc---CCCccCCcEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHI---TGDVMGGHAV 158 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~---~~~~~~~Hav 158 (229)
. ..|..... ...+++..+. ++.++++||++|+++|||+++|.+. +|++|++|||... ++...++|||
T Consensus 93 ~----~~C~~~~~----~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~-~f~~Y~~Giy~~~~~~c~~~~~~HaV 163 (214)
T 1m6d_A 93 M----QSCQFSAE----KAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAV 163 (214)
T ss_dssp C----CCCCCCGG----GCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTH-HHHHCCSSEECCCGGGSCTTCCCEEE
T ss_pred C----CcCCCCcc----cceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEec-hhhhcCCceecCCCCcCCCCcCCEEE
Confidence 1 12332211 1224455665 7778899999999999999999986 5999999999753 4444579999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEee
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 209 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p 209 (229)
+||||| ++++++|||||||||++||++|||||.|+.|.|||++.++++++
T Consensus 164 ~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 164 LLVGYG-QRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp EEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred EEEEEe-ecCCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 999999 67889999999999999999999999999999999999997764
No 9
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=3e-48 Score=321.73 Aligned_cols=181 Identities=29% Similarity=0.576 Sum_probs=151.0
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|++.+||+.. +++++.++||+|+|+||.. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 27 Afa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 92 (215)
T 3kwz_A 27 AFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQ------------ 92 (215)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTCEEBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhCCccccccCCCccC------------
Confidence 346667777755 4477889999999999996 57999999999999999887 9999999999754
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCC-CccCCcE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITG-DVMGGHA 157 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~-~~~~~Ha 157 (229)
. ..|..... ....++..|. ++ .++++||++|+++|||+++|.+. ++|+.|++|||..+.+ ...++||
T Consensus 93 -~----~~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~~Ha 163 (215)
T 3kwz_A 93 -E----ESCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHA 163 (215)
T ss_dssp -C----CCCCCCGG----GEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTCCCEE
T ss_pred -C----CccccCCC----CceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCChhhCE
Confidence 1 12332221 2345667777 54 47899999999999999999997 6999999999987644 4568999
Q ss_pred EEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 158 VKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 158 v~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|+||||| ++++++|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 164 V~iVGyg-~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~ 214 (215)
T 3kwz_A 164 VLAVGYG-IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPK 214 (215)
T ss_dssp EEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEEC
T ss_pred EEEEEEe-ccCCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeee
Confidence 9999999 778999999999999999999999999997 9999999999543
No 10
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=4.1e-48 Score=339.05 Aligned_cols=182 Identities=29% Similarity=0.576 Sum_probs=153.5
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPT 83 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~ 83 (229)
-|+..+||+.. +++++.++||||+|+||+....+.||+||++..|++|++++|+++|++|||.+. .
T Consensus 142 Faa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~-------------~ 208 (329)
T 3qt4_A 142 FSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYGNAGCDGGWMDSAFSYIHDYGIMSESAYPYEAQ-------------G 208 (329)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCTTBCCCHHHHHHHHHHSCBCBTTTSCCCSS-------------C
T ss_pred HHHHHHHHHHHHHHcCCcccCCHHHHHHhccccCCCCCCCCChhHHHHHHHHcCCCcHHHeeeecC-------------C
Confidence 35667777755 457889999999999999744578999999999999999999999999999765 1
Q ss_pred cccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCC-CccCCcEEEE
Q 027054 84 PKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-DVMGGHAVKL 160 (229)
Q Consensus 84 ~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~-~~~~~Hav~i 160 (229)
+ .|..... ...+++..|. ++ .++++||++|+++|||+|+|.+..+|++|++|||..+.+ ...++|||+|
T Consensus 209 ~----~C~~~~~----~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~i 280 (329)
T 3qt4_A 209 D----YCRFDSS----QSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDELQFYSGGLFYDQTCNQSDLNHGVLV 280 (329)
T ss_dssp C----CCCCCGG----GCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEECCCGGGTTEEEEEECCSSCCSSCCCEEEEE
T ss_pred C----CCCCCcc----cceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEecChhhhhccCceeecCCCCCCcCCEEEEE
Confidence 2 2332221 2345677887 55 578999999999999999999988999999999988644 4568999999
Q ss_pred EEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 161 IGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 161 VGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|||| ++++.+|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 281 VGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp~ 328 (329)
T 3qt4_A 281 VGYG-SDNGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYPA 328 (329)
T ss_dssp EEEE-EETTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEEE
T ss_pred EEEE-eeCCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEee
Confidence 9999 778999999999999999999999999998 9999999999654
No 11
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=5.5e-48 Score=320.77 Aligned_cols=183 Identities=26% Similarity=0.549 Sum_probs=152.3
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcC-CCCCCCCCCCCChHHHHHHHHH-cCccCCCCccCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACC-GFLCGDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPA 80 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~-~~~~~~gC~Gg~~~~Al~~~~~-~Gi~~e~~~PY~~~~~~~~~~c~~~ 80 (229)
+-|++.+||+.+ +++++.++||+|+|+||+ ....+.||+||++..|++|+++ .|+++|++|||.+.
T Consensus 28 Afa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~----------- 96 (218)
T 3ovx_A 28 AFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM----------- 96 (218)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSS-----------
T ss_pred HHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHHhCCcCcccccCccCC-----------
Confidence 346677777765 457788999999999999 3334799999999999999976 79999999999664
Q ss_pred CCCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcE
Q 027054 81 YPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHA 157 (229)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Ha 157 (229)
...|..... ....++..|. ++ .++++||++|+++|||+++|.+. ++|+.|++|||..+.+...++||
T Consensus 97 ------~~~C~~~~~----~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~~Ha 166 (218)
T 3ovx_A 97 ------DQKCQYDSK----YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHG 166 (218)
T ss_dssp ------CCCCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCCSCCCEE
T ss_pred ------CCcccCCCc----cceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCCcccCcE
Confidence 123332221 3446677777 54 47889999999999999999986 48999999999887656668999
Q ss_pred EEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 158 VKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 158 v~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|+||||| ++++++|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 167 V~iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~ 217 (218)
T 3ovx_A 167 VLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPE 217 (218)
T ss_dssp EEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred EEEEEEe-ccCCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeee
Confidence 9999999 667899999999999999999999999997 9999999999654
No 12
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.1e-47 Score=324.44 Aligned_cols=187 Identities=27% Similarity=0.575 Sum_probs=151.6
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|++.++|+.. +++++.++||+|+|+||+. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 28 Afa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~------------ 93 (246)
T 2b1m_A 28 AFSATGAIEAAHAIATGNLVSLSEQELIDCVD--ESEGCYNGWHYQSFEWVVKHGGIASEADYPYKAR------------ 93 (246)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSBTTTBCCHHHHHHHHHHTTCBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCcCccccccccCC------------
Confidence 345667777755 4577889999999999996 57899999999999999997 9999999999665
Q ss_pred CCcccccccccccccccccceeEeeeE---E-eC-CcHHHHHHHHHh---CCCEEEEEEecCcccccCCceEEcc-CCCc
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAY---R-IN-SDPEDIMAEIYK---NGPVEVSFTVYEDFAHYKSGVYKHI-TGDV 152 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y---~-~~-~~~~~ik~~L~~---~gPV~v~~~~~~~f~~y~~Giy~~~-~~~~ 152 (229)
.+.|... .. ...+++..| . ++ .++++||++|++ +|||+++|.+ ++|+.|++|||..+ ++..
T Consensus 94 -~~~C~~~----~~----~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~-~~f~~Y~~Giy~~~~c~~~ 163 (246)
T 2b1m_A 94 -DGKCKAN----EI----QDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA-KDFHFYSGGIYDGGNCSSP 163 (246)
T ss_dssp -CCCCCGG----GC----CCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC-TTGGGCCSSEECCTTCCSS
T ss_pred -CCcCcCC----CC----CCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc-chhhcccceeecCCCCCCC
Confidence 1223222 11 223566677 5 54 578899999998 6999999999 99999999999874 5444
Q ss_pred c-CCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEeecCCchh
Q 027054 153 M-GGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGLPSSKNLV 215 (229)
Q Consensus 153 ~-~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~p~~~~~~ 215 (229)
. .+|||+||||| ++++++|||||||||++||++|||||+|+. |.|||++.+++++.....|.
T Consensus 164 ~~~~HaV~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~~~~~~ 230 (246)
T 2b1m_A 164 YGINHFVLIVGYG-SEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIEKSETL 230 (246)
T ss_dssp CCCCEEEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECCC----
T ss_pred CcCceEEEEEEEe-ccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEecCCCCC
Confidence 3 79999999999 668999999999999999999999999997 89999999998887665554
No 13
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=4.6e-48 Score=332.00 Aligned_cols=195 Identities=29% Similarity=0.659 Sum_probs=154.1
Q ss_pred hhchHHHHhcccc-ccC-C--CCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSPY-VSL-Q--NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEP 79 (229)
Q Consensus 4 ~~~~~~a~~s~~~-~~~-~--~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~ 79 (229)
+-|++.+||+.+. +++ + .++||+|+|+||+. ..||+||++..||+|++++|+++|++|||.+.. ..|..
T Consensus 68 Afa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---~~gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~----~~C~~ 140 (277)
T 1deu_A 68 AHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---AGSCEGGNDLSVWDYAHQHGIPDETCNNYQAKD----QECDK 140 (277)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS---SEETBEECHHHHHHHHHHTCBCBGGGSCCCSSC----CCCCH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC---CCCCCCCCHHHHHHHHHHcCCCcCccCCCcCCC----CCccc
Confidence 3456677777553 333 3 58999999999996 389999999999999999999999999997652 11211
Q ss_pred CCCCcccc--cccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCc
Q 027054 80 AYPTPKCV--RKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGH 156 (229)
Q Consensus 80 ~~~~~~~~--~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~H 156 (229)
...+..|. ..|.... ....+++..|. +. ++++||++|+++|||+++|.++++|+.|++|||...++...++|
T Consensus 141 ~~~~~~~~~~~~c~~~~----~~~~~~i~~y~~v~-~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~GIy~~~~~~~~~~H 215 (277)
T 1deu_A 141 FNQCGTCNEFKECHAIR----NYTLWRVGDYGSLS-GREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYINH 215 (277)
T ss_dssp HHHSEEEEETTEEEECS----SCCCBCEEEEEEEC-SHHHHHHHHHHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCE
T ss_pred cccccccccCccccccc----CcceEEeceeEecC-CHHHHHHHHHHcCCEEEEEecccccccCcCcEECCCCCCCcCCe
Confidence 00000111 0222211 12346777887 54 57899999999999999999988999999999988766666899
Q ss_pred EEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCC--------ccCcCcceeEEeecC
Q 027054 157 AVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN--------ECGIEEDVVAGLPSS 211 (229)
Q Consensus 157 av~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n--------~cgi~~~~~~~~p~~ 211 (229)
||+||||| ++++++|||||||||++||++|||||+|+.| .||||+.+++++|.+
T Consensus 216 aV~iVGyg-~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgIe~~~~~~~p~~ 277 (277)
T 1deu_A 216 VVSVAGWG-ISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV 277 (277)
T ss_dssp EEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTTTSCEEEEEECC
T ss_pred EEEEEEec-ccCCccEEEEEeCCCCccCCCcEEEEEcCCCcccccccccceeccccEeecccC
Confidence 99999999 6689999999999999999999999999998 999999999999963
No 14
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.6e-47 Score=318.49 Aligned_cols=185 Identities=28% Similarity=0.600 Sum_probs=152.5
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..+||+.. +++++.++||||+|+||+....+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 27 Afa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 94 (220)
T 3p5u_A 27 AFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINNGGINTEANYPYTAE------------ 94 (220)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHHTCBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccccccC------------
Confidence 346667778755 45778999999999999984447899999999999999987 8999999999665
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAV 158 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav 158 (229)
.+.|+..... .+.+++..|. ++ .++++||++| .+|||+++|.+. ++|+.|++|||...+... .+|||
T Consensus 95 -~~~C~~~~~~-------~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV 164 (220)
T 3p5u_A 95 -EGQCNLDLQQ-------EKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGIFTGPCGTA-VDHAV 164 (220)
T ss_dssp -CCCCCHHHHT-------CCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSEECCCCCCS-CCEEE
T ss_pred -CCCcCcCCCC-------CceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCceECCCCCCc-cceEE
Confidence 1223322111 2345677887 54 5778899988 789999999996 689999999998766544 59999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCC---ccCcCcceeEEeecC
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN---ECGIEEDVVAGLPSS 211 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n---~cgi~~~~~~~~p~~ 211 (229)
+||||| ++++++|||||||||++||++|||||+|+.| .|||++.++++++.+
T Consensus 165 ~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~~~ 219 (220)
T 3p5u_A 165 TIVGYG-TEGGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVKYY 219 (220)
T ss_dssp EEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEECSC
T ss_pred EEEEEe-cCCCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEEec
Confidence 999999 7889999999999999999999999999987 999999999877654
No 15
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.2e-47 Score=319.73 Aligned_cols=179 Identities=26% Similarity=0.501 Sum_probs=150.3
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
+-|++.+||+.. +++++.++||||+|+||.. +.||+||++..||+|++++|+++|++|||.+.
T Consensus 36 Afa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~---~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~------------- 99 (222)
T 3f5v_A 36 AFSGVAATESAYLAYRQQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQHNGVVQESYYRYVAR------------- 99 (222)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHHHHCEEBGGGSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC---CCCCCCCCHHHHHHHHHHcCCCchhhCCCccc-------------
Confidence 346667777755 4477889999999999997 79999999999999999999999999999764
Q ss_pred CcccccccccccccccccceeEeeeEE-e-CCcHHHHHHHHHh-CCCEEEEEEe--cCcccccCCceEEcc-CCCccCCc
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-I-NSDPEDIMAEIYK-NGPVEVSFTV--YEDFAHYKSGVYKHI-TGDVMGGH 156 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~-~~~~~~ik~~L~~-~gPV~v~~~~--~~~f~~y~~Giy~~~-~~~~~~~H 156 (229)
. ..|.... ...+++..|. + ..++++||++|++ +|||+++|.+ .++|++|++|||... ++...++|
T Consensus 100 ~----~~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~~~~~~~H 170 (222)
T 3f5v_A 100 E----QSCRRPN-----AQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYH 170 (222)
T ss_dssp C----CCCCCCS-----SCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSSCEEE
T ss_pred C----CCccCCc-----CcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCCCCCccCc
Confidence 1 1233111 3456777787 5 5788999999999 9999999998 468999999977543 44566899
Q ss_pred EEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEe
Q 027054 157 AVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 208 (229)
Q Consensus 157 av~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~ 208 (229)
||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++
T Consensus 171 aV~iVGyg-~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 171 AVNIVGYS-NAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVI 221 (222)
T ss_dssp EEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred EEEEEEEe-ccCCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEe
Confidence 99999999 7789999999999999999999999999999999999999654
No 16
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=2.4e-47 Score=316.61 Aligned_cols=180 Identities=26% Similarity=0.515 Sum_probs=148.9
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
+-|+..++|+.. +++++.++||+|+|+||+. .+.||+||++..||+|++++|+++|++|||.+.
T Consensus 27 Afa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~------------- 91 (216)
T 1ppo_A 27 AFSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAK------------- 91 (216)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS--SSCTTBCCCHHHHHHHHHHHCBCBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHccCCceecCHHHHHhccC--CCCCCCCCCHHHHHHHHHHhCcCccccCCccCC-------------
Confidence 345666777754 5577889999999999996 478999999999999999999999999999665
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
.+.|...+. ....+++..|. ++ .++++||++|++ |||+++|.++ ++|++|++|||..+++.. .+|||+
T Consensus 92 ~~~C~~~~~-------~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~ 162 (216)
T 1ppo_A 92 QGTCRAKQV-------GGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGTK-VDHAVT 162 (216)
T ss_dssp CCCCCGGGC-------CSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSEECCSCCSC-CCEEEE
T ss_pred CCCcCCCCC-------CCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCceECCCCCCC-CCEEEE
Confidence 122322211 02346777887 55 478899999987 9999999996 799999999998766554 599999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
||||| ++++++|||||||||++||++|||||+|+. |.|||++++++++
T Consensus 163 iVGyg-~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~ 214 (216)
T 1ppo_A 163 AVGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 214 (216)
T ss_dssp EEEEE-EETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEE
T ss_pred EEEee-ccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEe
Confidence 99999 667899999999999999999999999985 8999999999654
No 17
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=9.7e-48 Score=334.65 Aligned_cols=183 Identities=27% Similarity=0.554 Sum_probs=152.6
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPT 83 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~ 83 (229)
-|+..+||+.. ++++..++||+|+|+||+....+.||+||++..||+|+++.|+++|++|||.+. .
T Consensus 119 fa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~-------------~ 185 (310)
T 2o6x_A 119 FSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESSYPYTAV-------------E 185 (310)
T ss_dssp HHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGGCCCHHHHHHHHTTSCBCBTTTSCCCSS-------------C
T ss_pred HHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCCCCCHHHHHHHHHHCCcCchhcCCCCCC-------------C
Confidence 45666777755 457789999999999999633478999999999999999889999999999764 1
Q ss_pred cccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEcc-CCCccCCcEEEE
Q 027054 84 PKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHI-TGDVMGGHAVKL 160 (229)
Q Consensus 84 ~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~-~~~~~~~Hav~i 160 (229)
+ .|..... ...+++..|. ++ .++++||++|+++|||+|+|.+.++|+.|++|||..+ ++...++|||+|
T Consensus 186 ~----~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~i 257 (310)
T 2o6x_A 186 G----QCRYNKQ----LGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGIYQSQTCSPLRVNHAVLA 257 (310)
T ss_dssp C----CCCCCGG----GCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCCHHHHTEEEEEECCSSCCTTCCCEEEEE
T ss_pred C----CccCCCC----CCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecchhhhhCCCceecCCCCCCCCCCEEEEE
Confidence 2 2332211 2346778887 65 5889999999999999999999889999999999865 444467999999
Q ss_pred EEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEee
Q 027054 161 IGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGLP 209 (229)
Q Consensus 161 VGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~p 209 (229)
|||| ++++++|||||||||++||++|||||.|+. |.|||++.+++++.
T Consensus 258 VGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 258 VGYG-TQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp EEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred EEEe-ccCCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 9999 668999999999999999999999999997 89999999986553
No 18
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=3.4e-47 Score=315.54 Aligned_cols=178 Identities=27% Similarity=0.590 Sum_probs=147.7
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..++|+.. +++++.++||+|+|+||+. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 27 Afa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 92 (215)
T 1iwd_A 27 AFSAVAAVESINKIRTGQLISLSEQELVDCDT--ASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAV------------ 92 (215)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTCBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHhcCCccccChhHeEECcC--CCCCCCCCCHHHHHHHHHHhCCcccccccCccCC------------
Confidence 345667777754 4577889999999999996 37899999999999999987 9999999999654
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecC-cccccCCceEEccCCCccCCcEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKSGVYKHITGDVMGGHAV 158 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~-~f~~y~~Giy~~~~~~~~~~Hav 158 (229)
.+ .|.... .+.+++..|. ++ .++++||++|.+ |||+++|.+.. +|+.|++|||...++. ..+|||
T Consensus 93 -~~----~C~~~~-----~~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV 160 (215)
T 1iwd_A 93 -QG----SCKPYR-----LRVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGPCGT-AQNHGV 160 (215)
T ss_dssp -CC----CCCTTC-----CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEE
T ss_pred -CC----CCCCCC-----CceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceECCCCCC-cCCEEE
Confidence 12 232221 1345677777 54 467899999976 99999999987 8999999999876654 469999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
+||||| ++++++|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 161 ~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 213 (215)
T 1iwd_A 161 VIVGYG-TQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPT 213 (215)
T ss_dssp EEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred EEEEEe-ccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeee
Confidence 999999 668899999999999999999999999987 8999999998654
No 19
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-47 Score=317.47 Aligned_cols=179 Identities=26% Similarity=0.601 Sum_probs=147.7
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..+||+.. ++++..++||||+|+||.. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 29 Afa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~------------ 94 (221)
T 1cqd_A 29 AFSTVAAVEGINQIVTGDLISLSEQQLVDCTT--ANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQ------------ 94 (221)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTSBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHhcCCeeeeccceeEECCC--CCCCCCCCCHHHHHHHHHHhCCccccccCCccCC------------
Confidence 345667777754 5577889999999999996 36899999999999999987 9999999999664
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAV 158 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav 158 (229)
.+ .|..... .+.+++..|. ++ .++++||++|++ |||+++|.+. ++|+.|++|||...++. .++|||
T Consensus 95 -~~----~C~~~~~----~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV 163 (221)
T 1cqd_A 95 -DG----ICNSTVN----APVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTGSCNI-SANHAL 163 (221)
T ss_dssp -CC----CCCSSSC----CCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCCCCC-CCCEEE
T ss_pred -CC----CcCCCCC----CceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCccccCCCCC-cCCeEE
Confidence 11 2332211 2346777887 54 468899999965 9999999997 69999999999886654 479999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
+||||| ++++++|||||||||++||++|||||+|+. |.|||++++++++
T Consensus 164 ~iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 216 (221)
T 1cqd_A 164 TVVGYG-TENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216 (221)
T ss_dssp EEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred EEEEEc-ccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEE
Confidence 999999 668899999999999999999999999973 8999999998544
No 20
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-47 Score=331.94 Aligned_cols=182 Identities=25% Similarity=0.477 Sum_probs=153.9
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPT 83 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~ 83 (229)
-|+..+||+.. +++++.++||||+|+||+. ..||+||++..||+|+++.|+++|++|||.+. .
T Consensus 117 Fsa~~alE~~~~i~~g~~~~LSeq~lvdC~~---~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~-------------~ 180 (312)
T 1xkg_A 117 FSGVAATESAYLAYRDQSLDLAEQELVDCAS---QHGCHGDTIPRGIEYIQHNGVVQESYYRYVAR-------------E 180 (312)
T ss_dssp HHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC---SSTTBCCCHHHHHHHHHHHCEEBGGGSCCCSS-------------C
T ss_pred HHHHHHHHHHHHHHhCCCCCcCHHHHHhccC---CCCCCCCCHHHHHHHHHHcCCCccccCCccCC-------------C
Confidence 45666777755 4577899999999999993 38999999999999999999999999999765 1
Q ss_pred cccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHh-CCCEEEEEEecC--cccccCCceEEcc-CC-CccCCc
Q 027054 84 PKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYK-NGPVEVSFTVYE--DFAHYKSGVYKHI-TG-DVMGGH 156 (229)
Q Consensus 84 ~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~-~gPV~v~~~~~~--~f~~y~~Giy~~~-~~-~~~~~H 156 (229)
+. |. ... ...+++..|. ++ .++++||++|++ +|||+|+|.++. +|+.|++|||..+ +. ... +|
T Consensus 181 ~~----C~-~~~----~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~H 250 (312)
T 1xkg_A 181 QS----CR-RPN----AQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPN-YH 250 (312)
T ss_dssp CC----CC-CCS----SCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCE-EE
T ss_pred CC----CC-CCC----CceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccCCcEEcCCCCCCCcC-ce
Confidence 22 33 111 2356778887 65 588999999999 999999999987 8999999999875 43 335 99
Q ss_pred EEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCc
Q 027054 157 AVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKN 213 (229)
Q Consensus 157 av~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~ 213 (229)
||+||||| ++++++|||||||||++||++|||||+|+.|.|||++.+++++|..+.
T Consensus 251 aV~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~~~~~ 306 (312)
T 1xkg_A 251 AVNIVGYS-NAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVILGQTG 306 (312)
T ss_dssp EEEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEECTTCC
T ss_pred EEEEEEEe-ccCCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeeccCCC
Confidence 99999999 668999999999999999999999999999999999999988887654
No 21
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=4e-47 Score=315.76 Aligned_cols=180 Identities=28% Similarity=0.553 Sum_probs=148.5
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
+-|+..++|+.. ++++..++||+|+|+||.. .+.||+||++..||+|++++|+++|++|||.+.
T Consensus 27 Afa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~------------- 91 (218)
T 1yal_A 27 AFSTIATVEGINKIVTGNLLELSEQELVDCDK--HSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAK------------- 91 (218)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHCBCBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHhcCCccccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcCCCccccccccCC-------------
Confidence 345666777754 5577889999999999994 579999999999999999999999999999664
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
.+.|..... ....+++..|. ++ .++++||++|++ |||+++|.++ ++|+.|++|||..+++.. .+|||+
T Consensus 92 ~~~C~~~~~-------~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~-~~HaV~ 162 (218)
T 1yal_A 92 QYKCRATDK-------PGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGPCGTK-LDHAVT 162 (218)
T ss_dssp CCCCCGGGC-------CSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSEECCSCCSC-CCEEEE
T ss_pred CCCcccCcC-------CCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCceECCCCCCC-CCEEEE
Confidence 122322111 02346777887 55 478899999976 9999999996 799999999998766554 699999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
||||| ++++++|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 163 iVGyg-~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 214 (218)
T 1yal_A 163 AVGYG-TSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPF 214 (218)
T ss_dssp EEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEE
T ss_pred EEEee-ccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEE
Confidence 99999 667899999999999999999999999985 8999999999655
No 22
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=4.9e-47 Score=315.99 Aligned_cols=179 Identities=23% Similarity=0.504 Sum_probs=143.3
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|++.+||+.. +++++.++||||+|+||+. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 27 Afa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 92 (222)
T 3u8e_A 27 AFGATGAIEGIDAITTGRLISVSEQQIVDCDT--XXXXXXGGDADDAFRWVITNGGIASDANYPYTGV------------ 92 (222)
T ss_dssp TTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC--------CCCHHHHHHHHHHHTCBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHHcCCCcccCHHHHHhccC--cccccCCCCHHHHHHHHHHcCCccchhcCCCccc------------
Confidence 345667777755 4577889999999999997 37999999999999999998 9999999999754
Q ss_pred CCcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEecC-cccccCC-ceEEcc-CCC--ccCC
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKS-GVYKHI-TGD--VMGG 155 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~~-~f~~y~~-Giy~~~-~~~--~~~~ 155 (229)
. ..|..... ..+++..|. ++.++++||++| .+|||+++|.+.. +|+.|++ |||..+ +.. ..++
T Consensus 93 -~----~~C~~~~~-----~~~~i~~~~~v~~~~~~i~~~l-~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~~~~~ 161 (222)
T 3u8e_A 93 -D----GTCDLNKP-----IAARIDGYTNVPNSSSALLDAV-AKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDPATVD 161 (222)
T ss_dssp -C----CCCCCCSC-----CCBCCCEEEECCSCHHHHHHHH-HHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCGGGCC
T ss_pred -C----CccccCCC-----CeEEEccEEEeCCcHHHHHHHH-hCCCEEEEEEecChhhhcEeCCceECCCcccCCCCcCC
Confidence 1 23332221 145677777 667889999999 5699999999975 9999999 999884 433 2579
Q ss_pred cEEEEEEecccCC-CceEEEEEcCCCCCCCCCCeEEEEeCCC----ccCcCcceeEEe
Q 027054 156 HAVKLIGWGTSDD-GEDYWILANQWNRSWGADGYFKIKRGSN----ECGIEEDVVAGL 208 (229)
Q Consensus 156 Hav~iVGyg~~~~-~~~ywivkNSWG~~WG~~Gy~~i~~~~n----~cgi~~~~~~~~ 208 (229)
|||+||||| +++ +++|||||||||++||++|||||+|+.| .|||++.+++++
T Consensus 162 HaV~iVGyg-~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~ 218 (222)
T 3u8e_A 162 HTVLIVGYG-SNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPT 218 (222)
T ss_dssp EEEEEEEEE-ESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEE
T ss_pred EEEEEEEEe-ecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEE
Confidence 999999999 555 8999999999999999999999999987 999999999654
No 23
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=6.4e-47 Score=316.71 Aligned_cols=187 Identities=28% Similarity=0.538 Sum_probs=150.9
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. ++++..++||+|+|+||.. ..+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 29 fa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~------------- 94 (229)
T 1s4v_A 29 FSTIVAVEGINQIKTNKLVSLSEQELVDCDT-DQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAY------------- 94 (229)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-SSCCTTBCBCHHHHHHHHHHHTCBCBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHcCCCCCcCHHHHHhhCC-CCCCCCCCCCHHHHHHHHHHhCCccccccCCccCC-------------
Confidence 45666777754 4577889999999999996 246899999999999999987 9999999999654
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEe-cCcccccCCceEEccCCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~-~~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
. ..|..... ..+.+++..|. ++ .+++.||++|++ |||+++|.+ .++|+.|++|||..+++.. .+|||+
T Consensus 95 ~----~~C~~~~~---~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~-~~HaV~ 165 (229)
T 1s4v_A 95 D----GTCDVSKE---NAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTGSCGTE-LDHGVA 165 (229)
T ss_dssp C----CCCCHHHH---TCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCCC-CCEEEE
T ss_pred C----CCCCCCCC---CCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCcEECCCCCCC-CCeEEE
Confidence 1 22332110 12346777887 54 477899999976 999999999 5799999999998766543 599999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEeecCCch
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGLPSSKNL 214 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~p~~~~~ 214 (229)
|||||++.++++|||||||||++||++|||||+|+. |.|||++++++++.....|
T Consensus 166 iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~~ 224 (229)
T 1s4v_A 166 IVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224 (229)
T ss_dssp EEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSCC
T ss_pred EEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCCC
Confidence 999994444899999999999999999999999985 8999999999776655544
No 24
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=2e-47 Score=333.49 Aligned_cols=183 Identities=27% Similarity=0.540 Sum_probs=151.5
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHH-HcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~-~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. +++++.++||+|+|+||+....+.||+||++..||+|++ +.|+++|++|||.+.
T Consensus 124 Fsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~------------- 190 (316)
T 1cs8_A 124 FSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEAT------------- 190 (316)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCCCCCCCHHHHHHHHHHhCCcCchhccCCCCC-------------
Confidence 45666777755 457789999999999999633478999999999999997 689999999999765
Q ss_pred CcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEcc-CCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHI-TGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~-~~~~~~~Hav~ 159 (229)
.+ .|..... ...+++..|. ++.++++||++|+++|||+|+|.+. ++|++|++|||..+ ++...++|||+
T Consensus 191 ~~----~C~~~~~----~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~ 262 (316)
T 1cs8_A 191 EE----SCKYNPK----YSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 262 (316)
T ss_dssp CC----CCCCCGG----GEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEE
T ss_pred CC----CcCCCCc----cceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCChhhccccCceECCCCCCCCCCCEEEE
Confidence 11 2332211 2346677777 6668899999999999999999997 58999999999876 55446899999
Q ss_pred EEEec---ccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 160 LIGWG---TSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg---~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
||||| +++++++|||||||||++||++|||||.|+. |.|||++.+++++
T Consensus 263 iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~ 315 (316)
T 1cs8_A 263 VVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 315 (316)
T ss_dssp EEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEC
T ss_pred EEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEee
Confidence 99999 4447899999999999999999999999997 8999999998643
No 25
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4.6e-47 Score=332.90 Aligned_cols=180 Identities=31% Similarity=0.606 Sum_probs=152.2
Q ss_pred hchHHHHhccc-cccCC--CCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQ--NLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPA 80 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~--~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~ 80 (229)
-|+..+||+.. ++++. .++||+|+|+||+. .+.||+||++..||+|++++ |+++|++|||.+..
T Consensus 143 Faa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~---------- 210 (331)
T 3qj3_A 143 FSSTGAIESQMKIANGAGYDSSVSEQQLVDCVP--NALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMAD---------- 210 (331)
T ss_dssp HHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCT--TSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSC----------
T ss_pred HHHHHHHHHHHHHHhCCCcccCcCHHHHhhhcc--CCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCC----------
Confidence 35667777755 45677 89999999999997 37999999999999999998 99999999997651
Q ss_pred CCCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCC-CccCCcE
Q 027054 81 YPTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG-DVMGGHA 157 (229)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~-~~~~~Ha 157 (229)
..|..... ...+++..|. ++ .++++||++|+++|||+|+|.+..+|++|++|||..+.+ ...++||
T Consensus 211 -------~~C~~~~~----~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~Ha 279 (331)
T 3qj3_A 211 -------GNCHYDPN----QVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYYNPTCETNKFTHA 279 (331)
T ss_dssp -------CCCCCCTT----SEEECCSEEEEESSCCHHHHHHHHHHHCCEEEEECCCTTGGGEEEEEECCTTCCSSCCCEE
T ss_pred -------CCCCCCcc----cceeEeeEEEEeCCCCHHHHHHHHHhCCCEEEEEEcccccccccCceEeCCCCCCCcCCEE
Confidence 23332221 3456777887 65 488999999999999999999987799999999988644 4568999
Q ss_pred EEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 158 VKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 158 v~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|+||||| ++++.+|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 280 V~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~ 330 (331)
T 3qj3_A 280 VLIVGYG-NENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPT 330 (331)
T ss_dssp EEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred EEEEEEe-ccCCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcCCceeeee
Confidence 9999999 778999999999999999999999999998 9999999999654
No 26
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=3.1e-47 Score=332.15 Aligned_cols=181 Identities=26% Similarity=0.559 Sum_probs=150.3
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcC-CCCCCCCCCCCChHHHHHHHHH-cCccCCCCccCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACC-GFLCGDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~-~~~~~~gC~Gg~~~~Al~~~~~-~Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
-|+..+||+.. +++++.++||||+|+||+ ....+.||+||++..||+|+++ .|+++|++|||.+.
T Consensus 126 fs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~------------ 193 (315)
T 2c0y_A 126 FSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAM------------ 193 (315)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccCCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccC------------
Confidence 45666777755 447889999999999999 4335799999999999999985 79999999999765
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEcc-CCCccCCcE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHI-TGDVMGGHA 157 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~-~~~~~~~Ha 157 (229)
.+ .|..... ...+.+..|. ++ .++++||++|+++|||+|+|.+. ++|++|++|||..+ ++. .++||
T Consensus 194 -~~----~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~-~~~Ha 263 (315)
T 2c0y_A 194 -DQ----KCQYDSK----YRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ-NVNHG 263 (315)
T ss_dssp -CC----CCCCCGG----GEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCS-CCCEE
T ss_pred -CC----CcccCCc----ccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCC-cCCEE
Confidence 12 2332211 2345677777 65 48899999999999999999997 69999999999877 444 67999
Q ss_pred EEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 158 VKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 158 v~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
|+||||| ++++++|||||||||++||++|||||.|+. |.|||++.+++++
T Consensus 264 V~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~ 314 (315)
T 2c0y_A 264 VLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPE 314 (315)
T ss_dssp EEEEEEE-EETTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred EEEEEEe-ecCCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEee
Confidence 9999999 668999999999999999999999999995 9999999999654
No 27
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=3.4e-47 Score=331.81 Aligned_cols=180 Identities=29% Similarity=0.577 Sum_probs=149.5
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHH-HcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFV-HHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~-~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. +++++.++||||+|+||+. .+.||+||++..||+|++ +.|+++|++|||.+..
T Consensus 127 Fs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~------------ 192 (314)
T 1by8_A 127 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE------------ 192 (314)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT--TSCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSC------------
T ss_pred HHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCC------------
Confidence 35666777755 4478899999999999996 579999999999999998 5799999999997651
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEcc-CCCccCCcEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHI-TGDVMGGHAV 158 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~-~~~~~~~Hav 158 (229)
+ .|..... ...+.+..|. ++ .++++||++|+++|||+|+|.+. ++|+.|++|||..+ ++...++|||
T Consensus 193 -~----~C~~~~~----~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV 263 (314)
T 1by8_A 193 -E----SCMYNPT----GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAV 263 (314)
T ss_dssp -C----CCCCCGG----GCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEE
T ss_pred -C----CcCCCCc----cceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeChHHhhhccCceecCCCCCCCCCCeEE
Confidence 1 2322111 1234567776 65 48899999999999999999997 69999999999876 5544679999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC-CccCcCcceeEEe
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS-NECGIEEDVVAGL 208 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 208 (229)
+||||| ++++.+|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 264 ~iVGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~ 313 (314)
T 1by8_A 264 LAVGYG-IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPK 313 (314)
T ss_dssp EEEEEE-EETTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEEC
T ss_pred EEEEEe-ccCCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEee
Confidence 999999 668999999999999999999999999995 9999999998643
No 28
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=3.2e-46 Score=309.09 Aligned_cols=175 Identities=25% Similarity=0.490 Sum_probs=144.5
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPT 83 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~ 83 (229)
-|+..+||+.. +++++.++||||+|+||+. .+.||+||++..||+|++++|+++|++|||.+. .
T Consensus 28 fa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~-------------~ 92 (212)
T 2cio_A 28 FSAVVTIEGIIKIRTGNLNQYSEQELLDCDR--RSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGV-------------Q 92 (212)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHTCBCBTTTSCCCSS-------------C
T ss_pred HHHHHHHHHHHHHhcCCccccCHHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCcCcccccCCcCC-------------C
Confidence 45666777755 4577889999999999996 478999999999999999999999999999664 1
Q ss_pred cccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecC-cccccCCceEEccCCCccCCcEEEE
Q 027054 84 PKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKSGVYKHITGDVMGGHAVKL 160 (229)
Q Consensus 84 ~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~-~f~~y~~Giy~~~~~~~~~~Hav~i 160 (229)
+.|...+.. .+.+++..|. ++ .+++.||++|++ |||+++|.+.. +|+.|++|||..+++. ..+|||+|
T Consensus 93 ~~C~~~~~~-------~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~-~~~HaV~i 163 (212)
T 2cio_A 93 RYCRSREKG-------PYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGPCGN-KVDHAVAA 163 (212)
T ss_dssp CCCCTTTTC-------SCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS-CCCEEEEE
T ss_pred CCcCCCCCC-------CceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCceecCCCCC-CCCEEEEE
Confidence 223222210 2345677777 54 477899999976 99999999975 8999999999876655 46999999
Q ss_pred EEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 161 IGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 161 VGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
|||| + +|||||||||++||++|||||+|+. |.|||++++++++
T Consensus 164 VGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (212)
T 2cio_A 164 VGYG-P----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 210 (212)
T ss_dssp EEEE-T----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEE
T ss_pred EEec-C----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEE
Confidence 9999 2 9999999999999999999999986 8999999998654
No 29
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=2e-46 Score=339.17 Aligned_cols=186 Identities=35% Similarity=0.745 Sum_probs=149.4
Q ss_pred hchHHHHhccc-cccCCC--CCCCHHHHhhcCCCCCCCCCCCCChHHH-HHHHHHcCccCCCCccCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQN--LSLSVNDLLACCGFLCGDGCDGGYPISA-WRYFVHHGVVTEECDPYFDSTGCSHPGCEPA 80 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~--~~lS~Q~l~dC~~~~~~~gC~Gg~~~~A-l~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~ 80 (229)
-|+..|||+.. ++++.. ++||||+|+||+. .+.||+||++..| ++|++++|+++|++|||.+.
T Consensus 237 Fsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~--~~~GC~GG~~~~aa~~yi~~~Gi~tE~~yPY~~~----------- 303 (441)
T 3pdf_A 237 FASMGMLEARIRILTNNSQTPILSPQEVVSCSQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGT----------- 303 (441)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHTTHHHHHTCBCBGGGSCCCSS-----------
T ss_pred HHHHHHHHHHHHHhccCCCccccCHHHHHhhcc--CCCCCCCCchhHHHHHHHHhcCCCcHHHeeeccc-----------
Confidence 35667777765 345544 5699999999996 4799999999987 89999999999999999764
Q ss_pred CCCcccccccccccccccccceeEeeeEE-e-----CCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCC---
Q 027054 81 YPTPKCVRKCVKKNQLWRNSKHYSISAYR-I-----NSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGD--- 151 (229)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~-----~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~--- 151 (229)
.+. |..... ...+.+..|. + ..++++||++|+++|||+|+|.+.++|++|++|||..+.+.
T Consensus 304 --~~~----C~~~~~----~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGVy~~~~~~~~~ 373 (441)
T 3pdf_A 304 --DSP----CKMKED----CFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPF 373 (441)
T ss_dssp --CCC----SCCCSS----CCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSEECCC---CCC
T ss_pred --CCC----CCCccc----cceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCceEecCCCCccc
Confidence 112 221110 1123344555 3 35789999999999999999999999999999999876432
Q ss_pred ---ccCCcEEEEEEeccc-CCCceEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCc
Q 027054 152 ---VMGGHAVKLIGWGTS-DDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKN 213 (229)
Q Consensus 152 ---~~~~Hav~iVGyg~~-~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~ 213 (229)
..++|||+|||||++ +++.+|||||||||++||++|||||+|+.|.|||++.++++.|..+.
T Consensus 374 ~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~P~~~~ 439 (441)
T 3pdf_A 374 NPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPKL 439 (441)
T ss_dssp CCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEEECCCC
T ss_pred CCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEeeccCCC
Confidence 347999999999954 47899999999999999999999999999999999999999998653
No 30
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-46 Score=311.03 Aligned_cols=177 Identities=29% Similarity=0.561 Sum_probs=144.5
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
+-|++.+||+.. +++++.++||||+|+||+. .+.||+||++..||+|++++|+++|++|||.+.
T Consensus 27 Afa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~~~~~~Gi~~e~~yPY~~~------------- 91 (213)
T 3ioq_A 27 TFSSVAAVEGINKIVTGQLLSLSEQELLDCER--RSYGCRGGFPLYALQYVANSGIHLRQYYPYEGV------------- 91 (213)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHCEEBGGGSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHcCCCchhccCcCCC-------------
Confidence 346677777765 4577899999999999997 578999999999999999999999999999655
Q ss_pred CcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKL 160 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~i 160 (229)
.+.|...+.. ...+++..|. ++.+.+.++++++.+|||+++|.++ ++|+.|++|||...+. ...+|||+|
T Consensus 92 ~~~C~~~~~~-------~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~-~~~~HaV~i 163 (213)
T 3ioq_A 92 QRQCRASQAK-------GPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCG-TSIDHAVAA 163 (213)
T ss_dssp CCCCCGGGCC-------SCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCC-SCCCEEEEE
T ss_pred CCCCCCCccC-------CceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCC-CccCceEEE
Confidence 2233322211 3356778887 6554455555666789999999997 7999999999988554 346999999
Q ss_pred EEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 161 IGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 161 VGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
|||| .+|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 164 VGyg-----~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~ 210 (213)
T 3ioq_A 164 VGYG-----NDYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPT 210 (213)
T ss_dssp EEEE-----TTEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEE
T ss_pred EecC-----CCeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeE
Confidence 9999 39999999999999999999999987 8999999999654
No 31
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2e-46 Score=319.19 Aligned_cols=189 Identities=26% Similarity=0.526 Sum_probs=150.9
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..++|+.. +++++.++||||+|+||... .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 31 Faa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~-~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~------------- 96 (262)
T 2fo5_A 31 FSTVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAA------------- 96 (262)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS-SCCGGGCBCHHHHHHHHHHTTCEEBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC-CCCCCCCCCHHHHHHHHHHcCCcCchhcCCCcCc-------------
Confidence 35566777754 45778999999999999962 47899999999999999997 9999999999664
Q ss_pred Ccccccccccccccccccc-eeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEE
Q 027054 83 TPKCVRKCVKKNQLWRNSK-HYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAV 158 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~-~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav 158 (229)
.+.|...+. +...+ .+++..|. ++ .+++.||++|++ |||+++|.++ ++|++|++|||...++.. .+|||
T Consensus 97 ~~~C~~~~~-----~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~Y~sGVy~~~c~~~-~~HaV 169 (262)
T 2fo5_A 97 RGTCNVARA-----AQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTGECGTE-LDHGV 169 (262)
T ss_dssp CCCCCHHHH-----HHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCCC-CCEEE
T ss_pred cCccCCccc-----ccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhccCCceECCCCCCc-CCEEE
Confidence 123332210 01123 56778887 55 577899999987 8999999997 699999999998766554 59999
Q ss_pred EEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCC----ccCcCcceeEEeecCCch
Q 027054 159 KLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN----ECGIEEDVVAGLPSSKNL 214 (229)
Q Consensus 159 ~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n----~cgi~~~~~~~~p~~~~~ 214 (229)
+|||||++.++++|||||||||++||++|||||+|+.| .|||+..+++++....+|
T Consensus 170 ~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~ 229 (262)
T 2fo5_A 170 AVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKP 229 (262)
T ss_dssp EEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---
T ss_pred EEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCC
Confidence 99999954469999999999999999999999999864 599999999777665555
No 32
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=4.8e-46 Score=308.43 Aligned_cols=177 Identities=32% Similarity=0.603 Sum_probs=146.2
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
+-|+..+||+.. +++++.++||||+|+||.. .+.||+||++..||+|++++|+++|++|||.+..
T Consensus 27 Afa~~~~le~~~~i~~~~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~Gi~~e~~yPY~~~~------------ 92 (214)
T 2bdz_A 27 AFSTVATIEGINKIITGQLISLSEQELLDCER--RSHGCDGGYQTTSLQYVVDNGVHTEREYPYEKKQ------------ 92 (214)
T ss_dssp HHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHCEEBTTTSCCCSSC------------
T ss_pred HHHhHHHHHHHHHHhcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCCccccCCCCCCC------------
Confidence 345667777765 5577889999999999996 4689999999999999999999999999996651
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
+.|...+.. ...+++..|. ++ .++++||++|++ |||+++|.+. ++|++|++|||..+++. .++|||+
T Consensus 93 -~~C~~~~~~-------~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Giy~~~~~~-~~~HaV~ 162 (214)
T 2bdz_A 93 -GRCRAKDKK-------GPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGIYEGPCGT-NTDHAVT 162 (214)
T ss_dssp -CCCCTTTCC-------SCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCSCCS-CCCEEEE
T ss_pred -CCCCCCCCC-------CceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCceecCCCCC-CCCeEEE
Confidence 223221110 2346677787 54 578899999987 9999999998 69999999999887654 4799999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEee
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGLP 209 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~p 209 (229)
||||| + +|||||||||++||++|||||+|+. |.|||++.+++++.
T Consensus 163 iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 163 AVGYG-K----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEC-S----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred EEEcC-C----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 99999 2 9999999999999999999999986 89999999986543
No 33
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=5.4e-46 Score=306.86 Aligned_cols=172 Identities=27% Similarity=0.530 Sum_probs=143.7
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHc-CccCCCCccCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHH-GVVTEECDPYFDSTGCSHPGCEPAYP 82 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~-Gi~~e~~~PY~~~~~~~~~~c~~~~~ 82 (229)
-|+..+||+.. +++++.++||||+|+||.. .+.||+||++..||+|++++ |+++|++|||.+.
T Consensus 28 fa~~~~le~~~~i~~g~~~~lS~q~l~dC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~------------- 92 (208)
T 1o0e_A 28 FSTVSTVESINQIRTGNLISLSEQELVDCDK--KNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAV------------- 92 (208)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHHTCBCBTTTSCCCSS-------------
T ss_pred HHHHHHHHHHHHHhcCCceecCHHHhhhhcC--CCCCCCCCCHHHHHHHHHHhCCcCcccccCccCC-------------
Confidence 45666777754 4577899999999999995 57899999999999999987 9999999999664
Q ss_pred CcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecC-cccccCCceEEccCCCccCCcEEE
Q 027054 83 TPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 83 ~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~-~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
. ..|... ...+++..|. ++ .++++||++|++ |||+++|.+.. +|++|++|||..+++. ..+|||+
T Consensus 93 ~----~~C~~~------~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~-~~~HaV~ 160 (208)
T 1o0e_A 93 Q----GPCQAA------SKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIFSGPCGT-KLNHGVT 160 (208)
T ss_dssp C----CCCCCC------CCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEECCCCCS-CCCEEEE
T ss_pred C----CcCCCC------CceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceECCCCCC-cCCEEEE
Confidence 1 223321 2345677777 54 477899999976 99999999975 8999999999876654 4699999
Q ss_pred EEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC--CccCcCcceeEEe
Q 027054 160 LIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS--NECGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~--n~cgi~~~~~~~~ 208 (229)
||||| + +|||||||||++||++|||||+|+. |.|||++.+++++
T Consensus 161 iVGyg-~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~ 206 (208)
T 1o0e_A 161 IVGYQ-A----NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPT 206 (208)
T ss_dssp EEEEC-S----SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEE
T ss_pred EEEeC-C----CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeee
Confidence 99999 2 9999999999999999999999997 8999999998654
No 34
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=2.3e-46 Score=315.56 Aligned_cols=179 Identities=27% Similarity=0.594 Sum_probs=146.2
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHH-cCccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~-~Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..+||+.. ++++..++||||+|+||+. .+.||+||++..||+|+++ .|+++|++|||.+..
T Consensus 44 AFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~--~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~----------- 110 (241)
T 2oul_A 44 AFSSIGSVESQYAIRKNKLITLSEQELVDCSF--KNYGCNGGLINNAFEDMIELGGICPDGDYPYVSDA----------- 110 (241)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT--TSCTTBCBCHHHHHHHHHHTTSBCBTTSSCCCTTS-----------
T ss_pred HHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCcCccccCCCcCCC-----------
Confidence 346667777765 4577889999999999996 3789999999999999998 699999999997651
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
+. .|..... ...+++..|. ++ .++++||++| |||+++|.+.++|+.|++|||...++.. ++|||+
T Consensus 111 --~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~ 177 (241)
T 2oul_A 111 --PN---LCNIDRC----TEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEGIFDGECGDQ-LNHAVM 177 (241)
T ss_dssp --CC---CCCTTSS----SCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSSBCCSCBCSS-CCEEEE
T ss_pred --CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCcEEcCcCCCC-CCEEEE
Confidence 11 1322111 2345677776 54 4788999999 9999999998899999999998755444 799999
Q ss_pred EEEecccC---------CCceEEEEEcCCCCCCCCCCeEEEEeCCCc----cCcCcceeEEe
Q 027054 160 LIGWGTSD---------DGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~~~---------~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~----cgi~~~~~~~~ 208 (229)
|||||++. ++.+|||||||||++||++|||||+|+.|. |||++++++++
T Consensus 178 iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 239 (241)
T 2oul_A 178 LVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPL 239 (241)
T ss_dssp EEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEE
T ss_pred EEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEe
Confidence 99999432 278999999999999999999999999877 99999999765
No 35
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=2.2e-46 Score=327.55 Aligned_cols=179 Identities=26% Similarity=0.501 Sum_probs=147.9
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPT 83 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~ 83 (229)
-|+..+||+.. +++++.++||+|+|+||+. .+.||+||++..||+|++++|+++|++|||.+. .
T Consensus 134 Faa~~alE~~~~i~~g~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~-------------~ 198 (322)
T 1pci_A 134 FSAVATVEGINKIRTGKLVELSEQELVDCER--RSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAK-------------Q 198 (322)
T ss_dssp HHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT--TSCGGGCBCHHHHHHHHHHHCBCBTTTSCCCSS-------------C
T ss_pred HHHHHHHHHHHHHHcCCccccCHHHHHhhcC--CCCCCCCCCHHHHHHHHHHhCCCchhhCCCCCC-------------C
Confidence 35666777754 4578899999999999996 579999999999999999999999999999765 1
Q ss_pred cccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEEE
Q 027054 84 PKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKL 160 (229)
Q Consensus 84 ~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~i 160 (229)
+.|...+.. ...+++..|. ++ .++++||++|++ |||+|+|.++ ++|++|++|||..+++.. .+|||+|
T Consensus 199 ~~C~~~~~~-------~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~-~~HaV~i 269 (322)
T 1pci_A 199 GTCRAKQVG-------GPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGPCGTK-VDGAVTA 269 (322)
T ss_dssp CCCTTTTCC-------SCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECTTCHHHHTEEEEEECCSCCSC-CCEEEEE
T ss_pred CCCCCCCCC-------CceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEecccccccccCCeEeCCCCCCC-CCEEEEE
Confidence 222221110 1235677777 55 478899999987 9999999996 799999999998766554 5999999
Q ss_pred EEecccCCCceEEEEEcCCCCCCCCCCeEEEEeCC----CccCcCcceeEEe
Q 027054 161 IGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGS----NECGIEEDVVAGL 208 (229)
Q Consensus 161 VGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 208 (229)
|||| +++|.+|||||||||++||++|||||.|+. |.|||++.+++++
T Consensus 270 VGyg-~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~ 320 (322)
T 1pci_A 270 VGYG-KSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 320 (322)
T ss_dssp EEEE-EETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEEC
T ss_pred EEEe-ccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEE
Confidence 9999 667999999999999999999999999996 8999999999543
No 36
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=2.7e-46 Score=311.71 Aligned_cols=182 Identities=25% Similarity=0.537 Sum_probs=148.2
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHH-cCccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~-~Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|++.+||+.. +++++.++||+|+|+||+....+.||+||++..|++|+++ .|+++|++|||.+.
T Consensus 33 Afa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~------------ 100 (224)
T 3f75_A 33 AFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVLDSGGICSEDAYPYLAR------------ 100 (224)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHHHHTCBCBTTTSCCCSS------------
T ss_pred HHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHHHhCCccccccCCCcCC------------
Confidence 346667777755 4467899999999999997434799999999999999997 79999999999765
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecC-cccccCCceEEccCCCccCCcEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYE-DFAHYKSGVYKHITGDVMGGHAV 158 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~-~f~~y~~Giy~~~~~~~~~~Hav 158 (229)
.+ .|..... ....++..|. ++ .++++||++|. +|||+++|.+.. +|++|++|||++.+ ...++|||
T Consensus 101 -~~----~C~~~~~----~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~Giy~~~~-~~~~~Hav 169 (224)
T 3f75_A 101 -DE----ECRAQSC----EKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEGVFDASC-GTDLDHGV 169 (224)
T ss_dssp -CC----CCCGGGS----CCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEEEECCCC-CCCCCEEE
T ss_pred -CC----CCCcCCC----CceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccceECCCC-CCccCeEE
Confidence 11 2322211 2234566777 53 57889999998 899999999975 89999999998444 45579999
Q ss_pred EEEEecccC-CCceEEEEEcCCCCCCCCCCeEEEEeCC---CccCcCcceeEEe
Q 027054 159 KLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGS---NECGIEEDVVAGL 208 (229)
Q Consensus 159 ~iVGyg~~~-~~~~ywivkNSWG~~WG~~Gy~~i~~~~---n~cgi~~~~~~~~ 208 (229)
+|||||+++ ++++|||||||||++||++|||||+|+. |.|||++++++++
T Consensus 170 ~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~ 223 (224)
T 3f75_A 170 LLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPV 223 (224)
T ss_dssp EEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEE
T ss_pred EEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeee
Confidence 999999443 7899999999999999999999999998 9999999999653
No 37
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=3.5e-46 Score=314.79 Aligned_cols=179 Identities=27% Similarity=0.599 Sum_probs=146.5
Q ss_pred hhchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHH-cCccCCCCccCCCCCCCCCCCCCCCC
Q 027054 4 TRTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVH-HGVVTEECDPYFDSTGCSHPGCEPAY 81 (229)
Q Consensus 4 ~~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~-~Gi~~e~~~PY~~~~~~~~~~c~~~~ 81 (229)
+-|+..+||+.. ++++..++||+|+|+||.. .+.||+||++..||+|+++ .|+++|++|||.+..
T Consensus 46 Afa~~~alE~~~~i~~~~~~~lSeq~lvdC~~--~~~gC~GG~~~~a~~y~~~~~Gi~~e~~yPY~~~~----------- 112 (243)
T 3bwk_A 46 AFSSVGSVESQYAIRKKALFLFSEQELVDCSV--KNNGCYGGYITNAFDDMIDLGGLCSQDDYPYVSNL----------- 112 (243)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCT--TSCGGGCCCHHHHHHHHHHTTSBCBTTTSCCCTTS-----------
T ss_pred HHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhCCcccccccCCcCCC-----------
Confidence 346667777765 4577889999999999996 3689999999999999998 699999999997641
Q ss_pred CCcccccccccccccccccceeEeeeEE-eC-CcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEE
Q 027054 82 PTPKCVRKCVKKNQLWRNSKHYSISAYR-IN-SDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVK 159 (229)
Q Consensus 82 ~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~-~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~ 159 (229)
+. .|..... ...+++..|. ++ .++++||++| |||+++|.+.++|+.|++|||...++.. ++|||+
T Consensus 113 --~~---~C~~~~~----~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~Giy~~~c~~~-~~HaV~ 179 (243)
T 3bwk_A 113 --PE---TCNLKRC----NERYTIKSYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGGFYDGECGAA-PNHAVI 179 (243)
T ss_dssp --CC---CCCGGGC----SSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSSSCCCCCCSS-CCEEEE
T ss_pred --CC---cCCCCCC----ccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCceecCCCCCc-CCeEEE
Confidence 11 1322111 2345677776 54 4788999999 9999999998899999999998755544 799999
Q ss_pred EEEecccC---------CCceEEEEEcCCCCCCCCCCeEEEEeCCCc----cCcCcceeEEe
Q 027054 160 LIGWGTSD---------DGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGL 208 (229)
Q Consensus 160 iVGyg~~~---------~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~----cgi~~~~~~~~ 208 (229)
|||||++. ++.+|||||||||++||++|||||+|+.|. |||++++++++
T Consensus 180 iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 241 (243)
T 3bwk_A 180 LVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPL 241 (243)
T ss_dssp EEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEE
T ss_pred EEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEe
Confidence 99999432 278999999999999999999999999877 99999999765
No 38
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=8e-44 Score=314.76 Aligned_cols=174 Identities=26% Similarity=0.513 Sum_probs=137.6
Q ss_pred chHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCCc
Q 027054 6 TNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTP 84 (229)
Q Consensus 6 ~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~~ 84 (229)
|+..+||+.. +++++.++||||+|+||.. .+.||+||++..|++|++++|+++|++|||.+.. +
T Consensus 180 sa~~alE~~~~i~tg~~~~LSeQ~LvdC~~--~~~GC~GG~~~~a~~yi~~~Gi~~e~~yPY~~~~-------------~ 244 (363)
T 3tnx_A 180 SAVSTIESIIKIRTGNLNEYSEQELLDCDR--RSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQ-------------R 244 (363)
T ss_dssp HHHHHHHHHHHHHHSCCCCBCHHHHHHHCT--TSCTTBCCCHHHHHHHHHHTCBCBTTTSCCCSSC-------------C
T ss_pred hhcccHHHHHHHHcCCCCCcCHHHHhcccC--CCCCCCCCChHHHHhHHHhcCccccccCCCcCcC-------------C
Confidence 5566677755 5578999999999999997 5689999999999999999999999999996641 1
Q ss_pred ccccccccccccccccceeEeeeEE-e-CCcHHHHHHHHHhCCCEEEEEEe-cCcccccCCceEEccCCCccCCcEEEEE
Q 027054 85 KCVRKCVKKNQLWRNSKHYSISAYR-I-NSDPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLI 161 (229)
Q Consensus 85 ~~~~~c~~~~~~~~~~~~~~i~~y~-~-~~~~~~ik~~L~~~gPV~v~~~~-~~~f~~y~~Giy~~~~~~~~~~Hav~iV 161 (229)
.|...+.. .....+..|. + ..++..++.+| ..|||+|++.+ .++|++|++|||..+++.. .+|||+||
T Consensus 245 ~c~~~~~~-------~~~~~~~~~~~~~~~~e~~l~~~v-~~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~-lnHaV~iV 315 (363)
T 3tnx_A 245 YCRSREKG-------PYAAKTDGVRQVQPYNEGALLYSI-ANQPVSVVLEAAGKDFQLYRGGIFVGPCGNK-VDHAVAAV 315 (363)
T ss_dssp CCCGGGGC-------SCSBCCCEEEEECSSCHHHHHHHH-TTSCEEEEECCCSHHHHTEEEEEECCCCCSC-CCEEEEEE
T ss_pred CcccCCCC-------CceeeccceEEcchhhHHHHHHHH-HcCCcEEEEEecchhhhCCCCCEECCCCCCC-CCeEEEEE
Confidence 12111111 1223445555 4 34555555555 77999999986 5789999999998877654 59999999
Q ss_pred EecccCCCceEEEEEcCCCCCCCCCCeEEEEeCCC----ccCcCcceeEEe
Q 027054 162 GWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSN----ECGIEEDVVAGL 208 (229)
Q Consensus 162 Gyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n----~cgi~~~~~~~~ 208 (229)
||| ++|||||||||++||++|||||.||.| .|||++.+++++
T Consensus 316 GyG-----~~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi 361 (363)
T 3tnx_A 316 GYG-----PNYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 361 (363)
T ss_dssp EEE-----TTEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred EcC-----CCcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence 999 469999999999999999999999874 599999999644
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=5.1e-43 Score=298.84 Aligned_cols=204 Identities=23% Similarity=0.368 Sum_probs=141.1
Q ss_pred hchHHHHhccc-cccCCCCCCCHHHHhhcCCCCCCCCCCCCC-hHHHHHHHHHcC-ccCCCCccCCCC---CCCCCCCCC
Q 027054 5 RTNRDALSSSP-YVSLQNLSLSVNDLLACCGFLCGDGCDGGY-PISAWRYFVHHG-VVTEECDPYFDS---TGCSHPGCE 78 (229)
Q Consensus 5 ~~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~~~~~gC~Gg~-~~~Al~~~~~~G-i~~e~~~PY~~~---~~~~~~~c~ 78 (229)
-|++.+||+.. +++++.++||||+|+||+....+.||+||+ +..++++++++| +++|++|||... ..|......
T Consensus 37 Faa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~~~Ggi~~e~~yPY~~~~~~~~C~~~~~~ 116 (265)
T 2wbf_X 37 FASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIEDYGFLPAESNYPYNYVKVGEQCPKVEDH 116 (265)
T ss_dssp HHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHHHHCCCCBTTTSCCCGGGTTSCCCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHHHcCCCCCccccCCcCCCCCCCCCCcccc
Confidence 35566777755 446688999999999999744579999986 556678888887 899999999642 233321100
Q ss_pred CCCCCcccccccccccccccccceeEeeeEE-eCC-----c----HHHHHHHHHhCCCEEEEEEecCcccccC-CceE-E
Q 027054 79 PAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INS-----D----PEDIMAEIYKNGPVEVSFTVYEDFAHYK-SGVY-K 146 (229)
Q Consensus 79 ~~~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~-----~----~~~ik~~L~~~gPV~v~~~~~~~f~~y~-~Giy-~ 146 (229)
... .......+.... ....+++..|. +.. + +++||++|+++|||+++|.+. +|+.|+ .|++ .
T Consensus 117 ~~~-~~~~~~~~~~~~----~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~GPV~v~i~~~-~f~~y~~~g~~~~ 190 (265)
T 2wbf_X 117 WMN-LWDNGKILHNKN----EPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKGSVIAYIKAE-NVMGYEFSGKKVK 190 (265)
T ss_dssp CCC-TTTTCEECCCCC----SSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHSCEEEEECGG-GGCSGGGGSSSEE
T ss_pred ccc-cccccccccccC----CCceeecCCceEeeccccccchhhHHHHHHHHHHhcCCEEEEEEcc-cccccccCCcEEc
Confidence 000 000000000000 01122344554 322 3 478999999999999999984 677774 4432 3
Q ss_pred ccCCCccCCcEEEEEEeccc--CCC--ceEEEEEcCCCCCCCCCCeEEEEe-CCCccCcCcceeEEeecCCch
Q 027054 147 HITGDVMGGHAVKLIGWGTS--DDG--EDYWILANQWNRSWGADGYFKIKR-GSNECGIEEDVVAGLPSSKNL 214 (229)
Q Consensus 147 ~~~~~~~~~Hav~iVGyg~~--~~~--~~ywivkNSWG~~WG~~Gy~~i~~-~~n~cgi~~~~~~~~p~~~~~ 214 (229)
..++...++|||+|||||++ +++ ++|||||||||++||++|||||+| +.|.|||+..+..++|.+..|
T Consensus 191 ~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~Cgi~~~~~~~~~~~~~~ 263 (265)
T 2wbf_X 191 NLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTHCHFNFIHSVVIFNVDLP 263 (265)
T ss_dssp CCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTTCSSCSCCEEEEECEECC
T ss_pred CCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCccCcceeEEEEeccccCC
Confidence 34555567999999999953 355 689999999999999999999986 579999999999999887665
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=1.1e-39 Score=281.87 Aligned_cols=180 Identities=23% Similarity=0.307 Sum_probs=140.6
Q ss_pred hhchHHHHhccccccCCCCCCCHHHHh--hcCCC--CCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCC----CCCCC
Q 027054 4 TRTNRDALSSSPYVSLQNLSLSVNDLL--ACCGF--LCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDST----GCSHP 75 (229)
Q Consensus 4 ~~~~~~a~~s~~~~~~~~~~lS~Q~l~--dC~~~--~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~----~~~~~ 75 (229)
+-|++.+||+...+++..++||+|+|+ +|... ....+|+||++..||+|++++|+++|++|||.+.. .|..+
T Consensus 80 AFAa~~alE~~~~~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~Gi~~e~~yPY~~~~~~~~~C~~~ 159 (291)
T 3ois_A 80 ANALAAAIQFERIHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGDTPADPRTEEFP 159 (291)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHTCCCBGGGSCCCCCCCCTTTCSCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHhCCCCHhhCCCCCCcccccccccc
Confidence 346677788777778888899999999 67641 12356899999999999999999999999997662 33332
Q ss_pred CCCCCCCCcccccccccccccccccceeEeeeEE-eCCcHHHHHHHHHhCCCEEEEEEecCcccccCC--ceEEccCC--
Q 027054 76 GCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYR-INSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKS--GVYKHITG-- 150 (229)
Q Consensus 76 ~c~~~~~~~~~~~~c~~~~~~~~~~~~~~i~~y~-~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~--Giy~~~~~-- 150 (229)
.+.+. +..+...|... ...+++..|. ++.++++||++|+++|||+++|.++++|+.|++ |||..+.+
T Consensus 160 ~~~~~--~~~p~~~C~~~------~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~ 231 (291)
T 3ois_A 160 PGAPA--SKKPSDQCYKD------AQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKND 231 (291)
T ss_dssp TTCGG--GSCCCHHHHHH------HGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTS
T ss_pred ccccc--cCCCCHHHHhh------cccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCC
Confidence 11110 11112334322 3456778887 777899999999999999999999999999998 99987643
Q ss_pred CccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEeC
Q 027054 151 DVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRG 194 (229)
Q Consensus 151 ~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~ 194 (229)
...++|||+||||| ++++|||||||||++||++|||||+|+
T Consensus 232 ~~~~~Hav~iVGy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 232 TLEGGHAVLCVGYD---DEIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp CEEEEEEEEEEEEE---TTTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred CCcCCeEEEEEEEe---CCCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 33469999999999 678999999999999999999999997
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=99.96 E-value=6.2e-30 Score=230.60 Aligned_cols=99 Identities=20% Similarity=0.285 Sum_probs=80.3
Q ss_pred HHHHHHHHhCCCEEEEEEecCcccccCCceEEccCC----------------------CccCCcEEEEEEec--ccCCCc
Q 027054 115 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITG----------------------DVMGGHAVKLIGWG--TSDDGE 170 (229)
Q Consensus 115 ~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~----------------------~~~~~Hav~iVGyg--~~~~~~ 170 (229)
+.++.+|..+|||.+++.+.. +.++++|||+..+. +...+|||+||||| .+++|+
T Consensus 309 ~~~~~al~~g~PV~~~~Dv~~-~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~~s~~~HAmlivGyg~~~d~~G~ 387 (453)
T 2cb5_A 309 KMVAASIKDGEAVWFGCDVGK-HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGESLMTHAMTFTAVSEKDDQDGA 387 (453)
T ss_dssp HHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTTSCCCCEEEEEEEEEECTTSCSC
T ss_pred HHHHHHHHcCCCEEEEEEeCh-hhccCCcEEcCccccchhhcCccccccCHHHHhhccCCCCCeEEEEEEeccccccCCC
Confidence 455578889999999999975 34459999986543 23468999999999 666787
Q ss_pred -eEEEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCchhhhc
Q 027054 171 -DYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 218 (229)
Q Consensus 171 -~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~~~~~~ 218 (229)
+|||||||||++||++|||+|+++ .++.+...++...+-.++.+
T Consensus 388 ~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vvV~k~~l~~~~ 432 (453)
T 2cb5_A 388 FTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVVVDRKHVPEEV 432 (453)
T ss_dssp EEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEEEEGGGSCHHH
T ss_pred ccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEEechhhCCHHH
Confidence 999999999999999999999998 78888887777666655443
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=99.96 E-value=6e-29 Score=224.41 Aligned_cols=98 Identities=18% Similarity=0.248 Sum_probs=81.0
Q ss_pred HHHHHHHHhCCCEEEEEEecCcccccCCceEEccC--------------------CCccCCcEEEEEEecccCCCc--eE
Q 027054 115 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT--------------------GDVMGGHAVKLIGWGTSDDGE--DY 172 (229)
Q Consensus 115 ~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~--------------------~~~~~~Hav~iVGyg~~~~~~--~y 172 (229)
+.++.+|..++||.+++.+.. |++|++|||+..+ +....+|||+|||||.+++|+ +|
T Consensus 313 ~~~~~aL~~g~PV~~~~Dv~~-~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s~~~HAmlivGyg~d~~G~~p~y 391 (457)
T 2e01_A 313 KLVVKRLQNNKAVFFGSHTPK-FMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHESLMTAAMLITGCHVDETSKLPLR 391 (457)
T ss_dssp HHHHHHHHTTCCEEEEECTTT-TEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSCCCCEEEEEEEEEECTTTCCEEE
T ss_pred HHHHHHHHhCCCEEEEEEcCH-hHcccCceecccccchhhcCcccccCHHHhhccCCCCCCeEEEEEEEEeccCCCccCE
Confidence 556778889999999999975 7788999997654 233468999999999656888 89
Q ss_pred EEEEcCCCCCCCCCCeEEEEeCCCccCcCcceeEEeecCCchhhh
Q 027054 173 WILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKE 217 (229)
Q Consensus 173 wivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~p~~~~~~~~ 217 (229)
||||||||++||++|||+|+++ .++.++..++...+-.++.
T Consensus 392 W~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~ivV~k~~lp~~ 432 (457)
T 2e01_A 392 YRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIVVDINELPKE 432 (457)
T ss_dssp EEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEEEEGGGSCHH
T ss_pred EEEEeCccCCcCCCceEEeehh----hHhhccEEEEechhhCCHH
Confidence 9999999999999999999997 6888888777766555543
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.90 E-value=8.1e-24 Score=187.20 Aligned_cols=204 Identities=16% Similarity=0.131 Sum_probs=125.0
Q ss_pred chHHHHhccc-cccCCCCCCCHHHHhhcCCC----------CCCCCCCCCChHHHHHHHHHcCccCCCCcc----CCCCC
Q 027054 6 TNRDALSSSP-YVSLQNLSLSVNDLLACCGF----------LCGDGCDGGYPISAWRYFVHHGVVTEECDP----YFDST 70 (229)
Q Consensus 6 ~~~~a~~s~~-~~~~~~~~lS~Q~l~dC~~~----------~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~P----Y~~~~ 70 (229)
|+..++|+.. +++++.++||+|+|++|+.. ..+.||+||++..|+++++++|+++|++|| |...
T Consensus 38 Sa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~Givpe~~YP~~~~~~~~- 116 (383)
T 3pw3_A 38 SSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETFGLVPEEEMRPGMMYADT- 116 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHTCCCBGGGSCTTGGGTCS-
T ss_pred HhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHcCcCcHHhCCCCCCCCcc-
Confidence 4556666644 44678999999999999741 125799999999999999999999999999 2111
Q ss_pred CCCC-------------CCCC--CCC-----CC---------------ccccc-------ccccccccccc-----ccee
Q 027054 71 GCSH-------------PGCE--PAY-----PT---------------PKCVR-------KCVKKNQLWRN-----SKHY 103 (229)
Q Consensus 71 ~~~~-------------~~c~--~~~-----~~---------------~~~~~-------~c~~~~~~~~~-----~~~~ 103 (229)
...+ .... ... .. +..+. ..++. ..++. ..++
T Consensus 117 s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~TP~-~F~~~v~~~~~dyV 195 (383)
T 3pw3_A 117 LSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYTPK-SFFESTGLKASDYV 195 (383)
T ss_dssp SCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEECHH-HHHHHHTCCGGGEE
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcCHH-HHHHHhCCCccceE
Confidence 0000 0000 000 00 00000 00000 00000 0001
Q ss_pred Eee---------eEEe--C----------CcH----HHHHHHHHhCCCEEEEEEecCcccccCCceEEccC---------
Q 027054 104 SIS---------AYRI--N----------SDP----EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHIT--------- 149 (229)
Q Consensus 104 ~i~---------~y~~--~----------~~~----~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~--------- 149 (229)
.+. .|.+ . -.. +.+.+.|..+.||..+-.|.+.++. +.||...+.
T Consensus 196 ~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~-~~Gi~~~~~~~~~~~~~g 274 (383)
T 3pw3_A 196 SLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT-RDGVAVMPDDEKVQELSG 274 (383)
T ss_dssp EEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC-TTSEECCBCHHHHHHHSS
T ss_pred EEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC-CCceeeCcchhhHHHhcC
Confidence 110 1111 1 112 3455567779999999999875555 788773210
Q ss_pred -------------------------------------CCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEE
Q 027054 150 -------------------------------------GDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIK 192 (229)
Q Consensus 150 -------------------------------------~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~ 192 (229)
....-+|||+|||||.+++|++||+||||||++||++|||+|+
T Consensus 275 ~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~yw~vkNSWg~~~g~~Gy~~m~ 354 (383)
T 3pw3_A 275 SDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEYYMVKNSWGTNSKYNGIWYAS 354 (383)
T ss_dssp CCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEEEEEECSBCSCSTTTTEEEEE
T ss_pred cchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceEEEEEeCCCCCCCcCCeEEec
Confidence 0112369999999997678899999999999999999999999
Q ss_pred eCCCccCcCcceeEEeecCCchhh
Q 027054 193 RGSNECGIEEDVVAGLPSSKNLVK 216 (229)
Q Consensus 193 ~~~n~cgi~~~~~~~~p~~~~~~~ 216 (229)
++ =+..+...++...+-.++
T Consensus 355 ~~----wf~e~~~~ivV~k~~lp~ 374 (383)
T 3pw3_A 355 KA----FVRYKTMNIVVHKDALPK 374 (383)
T ss_dssp HH----HHHHHEEEEEEEGGGSCH
T ss_pred HH----HHHhhcEEEEechHhCCH
Confidence 76 455555555555444443
No 44
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.59 E-value=0.023 Score=44.45 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=49.6
Q ss_pred cHHHHHHHHHhCCCEEEEEEe-cCcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEE
Q 027054 113 DPEDIMAEIYKNGPVEVSFTV-YEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 191 (229)
Q Consensus 113 ~~~~ik~~L~~~gPV~v~~~~-~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i 191 (229)
+.+++|+.|-++.||.+...- .++ ......+||++||||- ..++.++.+|-|=|- +|++-+
T Consensus 98 s~neV~~~i~~Nk~I~v~~~~v~e~------------~~~~~~gHA~av~Gya-~~~~~~~y~~WNPW~-----~~~~~~ 159 (183)
T 1pxv_A 98 SYNQVDQLTKDNVGIMILAQSVSQN------------PNDPHLGHALAVVGNA-KINDQEKLIYWNPWD-----TELSIQ 159 (183)
T ss_dssp CHHHHHHHHHTTCCEEEEEECCCSS------------TTSCCCEEEEEEEEEE-EETTEEEEEEECTTC-----SSCEEE
T ss_pred CHHHHHHHHhcCCcEEEEccccccC------------CCCccCceeEEEEeee-ecCCCeEEEEeCCcc-----CCcEee
Confidence 557899999999999988763 232 1122358999999999 555889999999885 377777
Q ss_pred EeCCC
Q 027054 192 KRGSN 196 (229)
Q Consensus 192 ~~~~n 196 (229)
+.+++
T Consensus 160 ~a~S~ 164 (183)
T 1pxv_A 160 DADSS 164 (183)
T ss_dssp ETTCC
T ss_pred cCCCC
Confidence 76644
No 45
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.36 E-value=0.074 Score=41.41 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=70.8
Q ss_pred CCCCCCHHHHhhcCCCCCCCCCCCCChHHHHHHHHHcCccCCCCccCCCCCCCCCCCCCCCCCCcccccccccccccccc
Q 027054 20 QNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVHHGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRN 99 (229)
Q Consensus 20 ~~~~lS~Q~l~dC~~~~~~~gC~Gg~~~~Al~~~~~~Gi~~e~~~PY~~~~~~~~~~c~~~~~~~~~~~~c~~~~~~~~~ 99 (229)
....+|+++|..+ |..+...++|+++.|-. - -+.
T Consensus 51 ~yPn~S~~~l~~~----------~~t~~e~iky~~s~g~~-~---~~~-------------------------------- 84 (174)
T 1cv8_A 51 LHPNLQGQQFQFT----------GLTPREMIYFGQTQGRS-P---QLL-------------------------------- 84 (174)
T ss_dssp HCSSCCHHHHHHC----------CCCHHHHHHHHHHTTCC-C---EEE--------------------------------
T ss_pred HCCCCCHHHHhhc----------CCCHHHHHHHHHHcCCC-h---hhh--------------------------------
Confidence 4578999999953 55778899999887631 0 010
Q ss_pred cceeEeeeEEeCCcHHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCC
Q 027054 100 SKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQW 179 (229)
Q Consensus 100 ~~~~~i~~y~~~~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSW 179 (229)
.-..+.+++++++.++.|+.+...-.++. .....+||++||||-...++.+|.++-|=|
T Consensus 85 ---------n~~ls~~eV~~~~~~nk~i~i~~~~ve~~------------~~~~~gHAlav~Gy~~~~ng~~~y~~WNPW 143 (174)
T 1cv8_A 85 ---------NRMTTYNEVDNLTKNNKGIAILGSRVESR------------NGMHAGHAMAVVGNAKLNNGQEVIIIWNPW 143 (174)
T ss_dssp ---------SSCCCHHHHHHHHHTTCCEEEEEEESSCB------------TTBCCEEEEEEEEEEEETTSCEEEEEECTT
T ss_pred ---------cCCCCHHHHHHHHhcCCceEEEcccccCC------------CCCCCceeEEEEeeeeecCCceEEEEeCCc
Confidence 01124478999999999998888743211 112357999999999556788999999988
Q ss_pred CCCCCCCCeEEEEeC
Q 027054 180 NRSWGADGYFKIKRG 194 (229)
Q Consensus 180 G~~WG~~Gy~~i~~~ 194 (229)
= ++++-++.+
T Consensus 144 ~-----~~~~~~s~~ 153 (174)
T 1cv8_A 144 D-----NGFMTQDAK 153 (174)
T ss_dssp C-----SSCEEEETT
T ss_pred c-----CCcEEecCC
Confidence 4 455555544
No 46
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=95.75 E-value=0.14 Score=44.06 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=48.9
Q ss_pred cHHHHHHHHHhCCCEEEEEEec-CcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEE
Q 027054 113 DPEDIMAEIYKNGPVEVSFTVY-EDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKI 191 (229)
Q Consensus 113 ~~~~ik~~L~~~gPV~v~~~~~-~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i 191 (229)
+.+++++.+-.+.||.+.+... ++ ......+||++||||.. .++.+|.++-|=|=. +++-+
T Consensus 274 s~deVk~~id~Nk~I~v~~~~v~~~------------~n~~~~gHAlavvGyA~-~~~~~~y~~WNPW~~-----~~~~~ 335 (367)
T 1x9y_A 274 SYNQVDQLTKDNVGIMILAQSVSQN------------PNDPHLGHALAVVGNAK-INDQEKLIYWNPWDT-----ELSIQ 335 (367)
T ss_dssp CHHHHHHHHHTTCCEEEEEEETTSC------------SSSCCCSEEEEEEEEEE-ETTEEEEEEECTTCS-----SCEEE
T ss_pred CHHHHHHHHhcCCcEEEEccccccC------------CCCccCceeEEEEeccc-cCCCcEEEEecCccC-----Cceee
Confidence 5578999999999999988742 22 11223589999999984 448899999998843 36666
Q ss_pred EeCCCcc
Q 027054 192 KRGSNEC 198 (229)
Q Consensus 192 ~~~~n~c 198 (229)
+..++..
T Consensus 336 sa~S~~i 342 (367)
T 1x9y_A 336 DADSSLL 342 (367)
T ss_dssp ETTCCEE
T ss_pred cCCCCeE
Confidence 6554433
No 47
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=93.45 E-value=0.16 Score=41.72 Aligned_cols=61 Identities=20% Similarity=0.348 Sum_probs=37.2
Q ss_pred CcHHHHHHHHHhCCCEEEEEEecCcccccC---CceEEccCCC---ccCCcEEEEEEecccCCCceEEEEEcCC
Q 027054 112 SDPEDIMAEIYKNGPVEVSFTVYEDFAHYK---SGVYKHITGD---VMGGHAVKLIGWGTSDDGEDYWILANQW 179 (229)
Q Consensus 112 ~~~~~ik~~L~~~gPV~v~~~~~~~f~~y~---~Giy~~~~~~---~~~~Hav~iVGyg~~~~~~~ywivkNSW 179 (229)
.+.++|+++|.++.||+|-... +|.-.. --.|..+.+. ....|+|+|+||+ .+..+|...+
T Consensus 130 ~sl~~L~~~I~~G~PVIv~~t~--~~~p~~~~~~~~W~~~~G~~~~~~~~H~VVl~GYd-----~~~vyi~DP~ 196 (236)
T 3erv_A 130 KSIEELYKSVKAGQPVVIITNA--TFAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYD-----QESVYIRDPL 196 (236)
T ss_dssp SCHHHHHHHHHTTCCEEEEEET--TSSCCCGGGCEEEEETTEEEEECTTEEEEEEEEEC-----SSEEEEECTT
T ss_pred CCHHHHHHHHHCCCeEEEEEeC--CcccccccccceeecCCCceeeccCCeEEEEEEEe-----CCEEEEECCC
Confidence 4789999999999999997764 222111 0112111111 1247999999999 2344455544
No 48
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=86.04 E-value=1.9 Score=37.69 Aligned_cols=63 Identities=25% Similarity=0.488 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEe
Q 027054 114 PEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 193 (229)
Q Consensus 114 ~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~ 193 (229)
.+.|++.|.+++||...-.-. .++||.+|-||+ +.+||-|-=.||-. .+|||.+..
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~----~~~~~H~NwGWgG~--~nGyy~l~~ 344 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGAD----GRNFYHVNWGWGGV--SDGFFRLDA 344 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEEC----SSSEEEEECSSTTT--TCEEEESCC
T ss_pred HHHHHHHHHcCCCEEEEeecC------------------CCceEEEECccc----CCCeEEEEeCcCCC--CCcceeccC
Confidence 357899999999996543211 158999999998 24688887666643 699999864
Q ss_pred -CCCccCc
Q 027054 194 -GSNECGI 200 (229)
Q Consensus 194 -~~n~cgi 200 (229)
..+.-|+
T Consensus 345 l~p~~~g~ 352 (371)
T 1dki_A 345 LNPSALGT 352 (371)
T ss_dssp C-------
T ss_pred CCCCCccc
Confidence 3333344
No 49
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=85.26 E-value=1.6 Score=37.32 Aligned_cols=60 Identities=23% Similarity=0.359 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEe
Q 027054 115 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 193 (229)
Q Consensus 115 ~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~ 193 (229)
+.|++.|.+++||...-.-. ++. ...++||.+|-||. . ..||-|-=.||-. .+|||.+..
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~-~~~------------~~~~GHafV~DGY~-~---~~~~H~NwGWgG~--~nGyy~l~~ 298 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP-GSM------------GQDAGHAFVIDGYN-K---AGLVSVNWGWNGD--VDGYYKIDL 298 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEEC-T---TSCEEEECSSTTT--TCEEECCTT
T ss_pred HHHHHHHHhCCCEEEEEecC-CCC------------CCCCceEEEEcccc-C---CCeEEEecCCCCC--CCceEeccC
Confidence 57899999999987643221 110 02368999999999 2 3688887777632 499998874
No 50
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=82.69 E-value=2.3 Score=35.26 Aligned_cols=56 Identities=25% Similarity=0.478 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEEEEEecccCCCceEEEEEcCCCCCCCCCCeEEEEe
Q 027054 114 PEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKR 193 (229)
Q Consensus 114 ~~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~~ywivkNSWG~~WG~~Gy~~i~~ 193 (229)
.+.|+++|.+..||..+-.- ..++||.+|-||. . .+|+-|-=.||-. .+|||.+..
T Consensus 171 ~~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~-~---~~~~H~NwGWgG~--~nGYy~l~~ 226 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGAD-G---RNFYHVNWGWGGV--SDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEE-S---SSCEEEECSSTTT--TCEEECTTC
T ss_pred HHHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccc-c---CCEEEEEcCCCCC--CCceeeccc
Confidence 36899999999999877532 1358999999998 2 3577776555521 699999864
No 51
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=47.53 E-value=62 Score=27.49 Aligned_cols=28 Identities=18% Similarity=0.305 Sum_probs=21.5
Q ss_pred CCcEEEEEEeccc---CCCceEEEEEcCCCC
Q 027054 154 GGHAVKLIGWGTS---DDGEDYWILANQWNR 181 (229)
Q Consensus 154 ~~Hav~iVGyg~~---~~~~~ywivkNSWG~ 181 (229)
.+||-.|++.... ..+.....|||-||.
T Consensus 245 ~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 245 RGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE 275 (339)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred CCceEEEeEEEEEecCCCceEEEEEeCCCCC
Confidence 5899999998732 123578999999995
No 52
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=36.91 E-value=1e+02 Score=25.89 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=21.3
Q ss_pred CCcEEEEEEecccC---CCceEEEEEcCCCC
Q 027054 154 GGHAVKLIGWGTSD---DGEDYWILANQWNR 181 (229)
Q Consensus 154 ~~Hav~iVGyg~~~---~~~~ywivkNSWG~ 181 (229)
.+||-.|++..... .+.....|||=||.
T Consensus 240 ~~HaYsVl~v~~v~~~~~~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 240 KSHAYSVTGVEEVNFQGHPEKLIRLRNPWGE 270 (326)
T ss_dssp SSCCEEEEEEEEEEETTEEEEEEEEECTTCC
T ss_pred cCceEEEEEEEEEecCCCceEEEEecCCCcC
Confidence 58999999987321 23578999999995
No 53
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=28.83 E-value=98 Score=26.20 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=21.9
Q ss_pred CCcEEEEEEeccc---CCCceEEEEEcCCCC
Q 027054 154 GGHAVKLIGWGTS---DDGEDYWILANQWNR 181 (229)
Q Consensus 154 ~~Hav~iVGyg~~---~~~~~ywivkNSWG~ 181 (229)
.+||-.|++.... .++.....|||-||.
T Consensus 244 ~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 244 KGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred cCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 5899999998732 134678999999996
No 54
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=25.40 E-value=1.8e+02 Score=27.10 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=20.8
Q ss_pred CCcEEEEEEecccC---CCceEEEEEcCCCC
Q 027054 154 GGHAVKLIGWGTSD---DGEDYWILANQWNR 181 (229)
Q Consensus 154 ~~Hav~iVGyg~~~---~~~~ywivkNSWG~ 181 (229)
.+||-.|++..... .+.....|||=||.
T Consensus 260 ~~HaYsvl~~~~v~~~~~~~~lv~lrNPWg~ 290 (714)
T 3bow_A 260 KGHAYSVTGAEEVESSGSLQKLIRIRNPWGQ 290 (714)
T ss_dssp TTSCEEEEEEEEEEETTEEEEEEEEECTTSC
T ss_pred CCceEEEeeeEEeecCCCceEEEEEECCCCC
Confidence 58999999987311 23567789999995
No 55
>1y08_A Hypothetical protein SPY0861; cysteine proteinase, papain-like fold with major insertions, hydrolase; 1.93A {Streptococcus pyogenes} SCOP: d.3.1.12 PDB: 2avw_A 2au1_A
Probab=23.27 E-value=1e+02 Score=26.13 Aligned_cols=61 Identities=18% Similarity=0.158 Sum_probs=37.4
Q ss_pred HHHHHHHHhCCCEEEEEEecCcccccCCceEEccCCCccCCcEEEEEEecccCCCc-eEEEEEcCCCCCCCCCCeEEEEe
Q 027054 115 EDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGE-DYWILANQWNRSWGADGYFKIKR 193 (229)
Q Consensus 115 ~~ik~~L~~~gPV~v~~~~~~~f~~y~~Giy~~~~~~~~~~Hav~iVGyg~~~~~~-~ywivkNSWG~~WG~~Gy~~i~~ 193 (229)
+.||.+|..+++|.++.... ....+|+|++=|++.+++|. .+..|--|=-. =..|-.|...
T Consensus 221 e~ike~L~~g~aiGLs~~~~----------------~~~~~H~ItvWGAE~De~Gnl~aIYvTDSDD~--~~vGmKRY~V 282 (323)
T 1y08_A 221 DLIKKELTEGKALGLSHTYA----------------NVRINHVINLWGADFDSNGNLKAIYVTDSDSN--ASIGMKKYFV 282 (323)
T ss_dssp HHHHHHHHTTCEEEEEECC-------------------CCCEEEEEEEEEECTTSCEEEEEEECTTSC--TTTCEEEEEE
T ss_pred HHHHHHHhcCCeEEEEeecc----------------CcCCCcEEEEeeeEecCCCCEEEEEEecCCCc--cccceEEEEE
Confidence 68999999988988776421 01138999999998666554 44444433222 2245545444
Done!