Your job contains 1 sequence.
>027058
MAGTAATVNLSSAPYLLRRSSFTTLSSKPSVLPMRPRSKFPRIYAFSSNDIKVGSNIEVD
GAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKETKQFTYKD
GSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFEVPITVQLTVVDV
DPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTRA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027058
(229 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2077888 - symbol:AT3G08740 species:3702 "Arabi... 836 1.9e-83 1
TIGR_CMR|CHY_1872 - symbol:CHY_1872 "translation elongati... 490 8.8e-47 1
TIGR_CMR|BA_4421 - symbol:BA_4421 "translation elongation... 470 1.2e-44 1
UNIPROTKB|P64034 - symbol:efp "Elongation factor P" speci... 461 1.0e-43 1
TIGR_CMR|CJE_0655 - symbol:CJE_0655 "translation elongati... 453 7.3e-43 1
TIGR_CMR|CPS_0972 - symbol:CPS_0972 "translation elongati... 449 1.9e-42 1
UNIPROTKB|P0A6N4 - symbol:efp "protein chain elongation f... 443 8.4e-42 1
UNIPROTKB|Q9KNS1 - symbol:efp "Elongation factor P" speci... 415 7.8e-39 1
TIGR_CMR|VC_2660 - symbol:VC_2660 "elongation factor P" s... 415 7.8e-39 1
TIGR_CMR|CBU_1816 - symbol:CBU_1816 "translation elongati... 409 3.4e-38 1
TIGR_CMR|GSU_1752 - symbol:GSU_1752 "translation elongati... 403 1.5e-37 1
TIGR_CMR|SPO_1244 - symbol:SPO_1244 "translation elongati... 327 1.6e-29 1
TIGR_CMR|DET_0714 - symbol:DET_0714 "translation elongati... 326 2.1e-29 1
TIGR_CMR|APH_0547 - symbol:APH_0547 "translation elongati... 302 7.3e-27 1
TIGR_CMR|GSU_0465 - symbol:GSU_0465 "translation elongati... 301 9.4e-27 1
TIGR_CMR|ECH_0777 - symbol:ECH_0777 "translation elongati... 291 1.1e-25 1
TIGR_CMR|DET_0870 - symbol:DET_0870 "translation elongati... 289 1.8e-25 1
TIGR_CMR|SO_2328 - symbol:SO_2328 "translation elongation... 281 1.2e-24 1
TIGR_CMR|NSE_0196 - symbol:NSE_0196 "translation elongati... 279 2.0e-24 1
UNIPROTKB|P0A6N8 - symbol:yeiP "predicted dehydrogenase, ... 246 6.3e-21 1
TIGR_CMR|CPS_1465 - symbol:CPS_1465 "elongation factor P-... 239 3.5e-20 1
UNIPROTKB|Q9KSP7 - symbol:VC_1209 "Elongation factor P-li... 210 4.1e-17 1
TIGR_CMR|VC_1209 - symbol:VC_1209 "elongation factor P fa... 210 4.1e-17 1
DICTYBASE|DDB_G0273555 - symbol:DDB_G0273555 "Elongation ... 123 5.6e-06 1
DICTYBASE|DDB_G0273411 - symbol:DDB_G0273411 "Elongation ... 123 5.6e-06 1
>TAIR|locus:2077888 [details] [associations]
symbol:AT3G08740 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0043043 "peptide biosynthetic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0045036 "protein
targeting to chloroplast" evidence=RCA] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 GO:GO:0009570 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM EMBL:AY063783 EMBL:AY117274
EMBL:AY086204 IPI:IPI00529257 RefSeq:NP_566333.1 UniGene:At.27166
ProteinModelPortal:Q8VZW6 SMR:Q8VZW6 IntAct:Q8VZW6 STRING:Q8VZW6
PaxDb:Q8VZW6 PRIDE:Q8VZW6 EnsemblPlants:AT3G08740.1 GeneID:820021
KEGG:ath:AT3G08740 TAIR:At3g08740 InParanoid:Q8VZW6
PhylomeDB:Q8VZW6 ProtClustDB:CLSN2688175 ArrayExpress:Q8VZW6
Genevestigator:Q8VZW6 Uniprot:Q8VZW6
Length = 236
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 161/237 (67%), Positives = 195/237 (82%)
Query: 1 MAGTAA-TVNLSSAP-----YXXXXXXXXXXXXKPSVLPMRPRS-KFPRIY-AFSSNDIK 52
MAG A +V+ SS P Y P+V + PR+ +FPRI+ + S+NDIK
Sbjct: 1 MAGRAIFSVSCSSTPSLCIPYSTASFSSMNRLALPAVR-ISPRTNRFPRIHCSMSANDIK 59
Query: 53 VGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADVFKE 112
G+NIEVDGAPWRVLEFLHVKPGKGAAFVRTK+RNY++G+TVERTFRAGI+VEEA+++KE
Sbjct: 60 AGTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVEEANIYKE 119
Query: 113 TKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFEVPIT 172
TKQFTYKDGS FVFMDLTT+EE RLNE+D+G+K KWLKEGMDC LL+WK K+IDF++PIT
Sbjct: 120 TKQFTYKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPIT 179
Query: 173 VQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTRA 229
V+L VVDVDPGL+GDT GGSKPAT++TGA+V VPLF+N+G+EI VDTRTG YM RA
Sbjct: 180 VKLKVVDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236
>TIGR_CMR|CHY_1872 [details] [associations]
symbol:CHY_1872 "translation elongation factor P"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:YP_360692.1
ProteinModelPortal:Q3AAZ2 SMR:Q3AAZ2 STRING:Q3AAZ2 GeneID:3728801
KEGG:chy:CHY_1872 PATRIC:21276839
BioCyc:CHYD246194:GJCN-1871-MONOMER Uniprot:Q3AAZ2
Length = 185
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/182 (51%), Positives = 127/182 (69%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
S+ND + G IE+DG ++V+EF HVKPGKG+ FVR+KLRN M+G +E+TF AG V +
Sbjct: 3 STNDFRTGLTIELDGEVYQVIEFQHVKPGKGSPFVRSKLRNLMTGAVIEKTFNAGEKVPK 62
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
A V + Q+ Y DG F MD+ T+++ L + GD ++KE + +LF+K K+I
Sbjct: 63 AHVDRREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKVIG 122
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
E+P V+L V+D PG+KGDTASGGSKPATL+TG VV VP FV +GD + +DTRTGQY+
Sbjct: 123 VELPNFVELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQYI 182
Query: 227 TR 228
R
Sbjct: 183 KR 184
>TIGR_CMR|BA_4421 [details] [associations]
symbol:BA_4421 "translation elongation factor P"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
HOGENOM:HOG000010049 RefSeq:NP_846649.1 RefSeq:YP_021063.1
RefSeq:YP_030351.1 ProteinModelPortal:Q6KMS8 IntAct:Q6KMS8
DNASU:1087775 EnsemblBacteria:EBBACT00000009430
EnsemblBacteria:EBBACT00000016529 EnsemblBacteria:EBBACT00000019526
GeneID:1087775 GeneID:2818617 GeneID:2852323 KEGG:ban:BA_4421
KEGG:bar:GBAA_4421 KEGG:bat:BAS4101
BioCyc:BANT260799:GJAJ-4158-MONOMER
BioCyc:BANT261594:GJ7F-4301-MONOMER Uniprot:Q6KMS8
Length = 185
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 87/183 (47%), Positives = 129/183 (70%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
S ND + G I VD W+VL+F HVKPGKGAAFVR+KLRN +G+ E+TFRAG VE+
Sbjct: 3 SVNDFRTGLTIAVDNGLWQVLDFQHVKPGKGAAFVRSKLRNLRTGSVQEKTFRAGEKVEK 62
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
A + Q+ Y G VFMD T+E++ L E + + K+LKE M+ +++ ++G+++
Sbjct: 63 AHIENRRMQYLYASGEAHVFMDNGTYEQIELGEKQIERELKFLKENMEVSIMTYQGEVLG 122
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
E+P TV+L V + +PG+KGDTAS +KPATL+TG VV VP+F+N G+ ++++T G+Y+
Sbjct: 123 VELPNTVELQVTETEPGIKGDTASNVTKPATLETGLVVQVPIFINEGEMLIINTGEGKYV 182
Query: 227 TRA 229
+RA
Sbjct: 183 SRA 185
>UNIPROTKB|P64034 [details] [associations]
symbol:efp "Elongation factor P" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 PIR:B70658
RefSeq:NP_217050.1 RefSeq:NP_337105.1 RefSeq:YP_006515975.1
ProteinModelPortal:P64034 SMR:P64034 PRIDE:P64034
EnsemblBacteria:EBMYCT00000003586 EnsemblBacteria:EBMYCT00000071126
GeneID:13319253 GeneID:888437 GeneID:925712 KEGG:mtc:MT2609
KEGG:mtu:Rv2534c KEGG:mtv:RVBD_2534c PATRIC:18127492
TubercuList:Rv2534c Uniprot:P64034
Length = 187
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 89/179 (49%), Positives = 120/179 (67%)
Query: 50 DIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV 109
D K G + +DG W + EF HVKPGKG AFVRTKL+N +SG V++TF AG+ V+ A V
Sbjct: 6 DFKNGLVLVIDGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVKVDTATV 65
Query: 110 FKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFEV 169
+ + Y+DGS FVFMD +E+ L E VGD ++L EGM + F G + E+
Sbjct: 66 DRRDTTYLYRDGSDFVFMDSQDYEQHPLPEALVGDAARFLLEGMPVQVAFHNGVPLYIEL 125
Query: 170 PITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTR 228
P+TV+L V +PGL+GD +S G+KPATL TGA +NVPLF+N GD++ VD+R G Y+ R
Sbjct: 126 PVTVELEVTHTEPGLQGDRSSAGTKPATLQTGAQINVPLFINTGDKLKVDSRDGSYLGR 184
>TIGR_CMR|CJE_0655 [details] [associations]
symbol:CJE_0655 "translation elongation factor P"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:YP_178670.1
ProteinModelPortal:Q5HVL5 STRING:Q5HVL5 GeneID:3232022
KEGG:cjr:CJE0655 PATRIC:20043030 BioCyc:CJEJ195099:GJC0-671-MONOMER
Uniprot:Q5HVL5
Length = 189
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 84/185 (45%), Positives = 123/185 (66%)
Query: 45 AFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITV 104
++S D+K G IE+DG P++++E+ HVKPGKG AFVR K+++++ G +E+TF AG
Sbjct: 3 SYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIKSFIDGKVLEKTFHAGDKC 62
Query: 105 EEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKI 164
E ++ +T Q+ Y DG FMD T+E+V +++ DVG+ KKW+ +GM ++LF GK
Sbjct: 63 EAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGEAKKWMLDGMMVDVLFHNGKA 122
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
I EVP V+L +++ P KGDT KPATL+TGAVV +P V G+ I VDT G+
Sbjct: 123 IGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGAVVQIPFHVLEGEVIRVDTVRGE 182
Query: 225 YMTRA 229
Y+ RA
Sbjct: 183 YIERA 187
>TIGR_CMR|CPS_0972 [details] [associations]
symbol:CPS_0972 "translation elongation factor P"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM RefSeq:YP_267721.1 STRING:Q487P4
GeneID:3520133 KEGG:cps:CPS_0972 PATRIC:21465221
BioCyc:CPSY167879:GI48-1058-MONOMER Uniprot:Q487P4
Length = 191
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 88/184 (47%), Positives = 118/184 (64%)
Query: 46 FSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVE 105
FS+N K G I +DG P +LE VKPGKG AF R K+R +SG +E+TF++G TVE
Sbjct: 4 FSTNQFKAGLKIMLDGEPCNILENELVKPGKGQAFSRVKIRKLVSGKVLEKTFKSGETVE 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKII 165
ADV + + Y DG + FM+ TFE++ E +G+ KWL EG C + W G I
Sbjct: 64 GADVMEVELAYLYADGEFWHFMNNETFEQIGAEEKALGETVKWLVEGDICTITLWNGTPI 123
Query: 166 DFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQY 225
V++ + + DPGLKGDTA G KPATL TGAVV VPLFV IG+++ +DTR+G+Y
Sbjct: 124 TVTAANFVEIDITETDPGLKGDTAGTGGKPATLATGAVVRVPLFVQIGEKVRIDTRSGEY 183
Query: 226 MTRA 229
++RA
Sbjct: 184 VSRA 187
>UNIPROTKB|P0A6N4 [details] [associations]
symbol:efp "protein chain elongation factor EF-P"
species:83333 "Escherichia coli K-12" [GO:0043043 "peptide
biosynthetic process" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] HAMAP:MF_00141 InterPro:IPR001059
InterPro:IPR011768 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 UniPathway:UPA00345 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0043022 GO:GO:0003746 EMBL:U14003 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 EMBL:X61676 PIR:S34443
RefSeq:NP_418571.1 RefSeq:YP_492290.1 PDB:3A5Z PDBsum:3A5Z
ProteinModelPortal:P0A6N4 SMR:P0A6N4 DIP:DIP-31834N IntAct:P0A6N4
PaxDb:P0A6N4 PRIDE:P0A6N4 EnsemblBacteria:EBESCT00000001595
EnsemblBacteria:EBESCT00000016420 GeneID:12931782 GeneID:948661
KEGG:ecj:Y75_p4034 KEGG:eco:b4147 PATRIC:32123863 EchoBASE:EB2023
EcoGene:EG12099 OMA:DSAKWLQ BioCyc:EcoCyc:EG12099-MONOMER
BioCyc:ECOL316407:JW4107-MONOMER BioCyc:MetaCyc:EG12099-MONOMER
Genevestigator:P0A6N4 Uniprot:P0A6N4
Length = 188
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/183 (48%), Positives = 116/183 (63%)
Query: 46 FSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVE 105
+ SND + G I +DG P+ V VKPGKG AF R KLR ++GT VE+TF++ + E
Sbjct: 4 YYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLRRLLTGTRVEKTFKSTDSAE 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKII 165
ADV + Y DG + FM+ TFE++ + +GD KWL + +C + W G+ I
Sbjct: 64 GADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGDNAKWLLDQAECIVTLWNGQPI 123
Query: 166 DFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQY 225
P V+L +VD DPGLKGDTA G KPATL TGAVV VPLFV IG+ I VDTR+G+Y
Sbjct: 124 SVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRSGEY 183
Query: 226 MTR 228
++R
Sbjct: 184 VSR 186
>UNIPROTKB|Q9KNS1 [details] [associations]
symbol:efp "Elongation factor P" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
PIR:F82047 RefSeq:NP_232288.1 ProteinModelPortal:Q9KNS1
DNASU:2615677 GeneID:2615677 KEGG:vch:VC2660 PATRIC:20084340
Uniprot:Q9KNS1
Length = 188
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 84/182 (46%), Positives = 112/182 (61%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
S+N+ K G I +D P +LE +VKPGKG AF R ++R ++G +E+TF++G T E
Sbjct: 5 STNEFKGGLKIMLDNEPCVILENEYVKPGKGQAFNRVRIRKLLTGKVLEKTFKSGDTAEV 64
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
ADV + Y DG + FM+ +TFE++ + VG+ KWL E C L W G I
Sbjct: 65 ADVVDIDLDYLYNDGEFYHFMNNSTFEQLAADAKAVGENAKWLVENNTCMLTLWNGNPIA 124
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
P V+L V + DPG+KGDT G KPATL TGAVV VPLFV IG+ I VDTR+ +Y+
Sbjct: 125 VTPPNFVELEVTETDPGVKGDTQGTGGKPATLSTGAVVRVPLFVQIGEVIKVDTRSAEYV 184
Query: 227 TR 228
R
Sbjct: 185 GR 186
>TIGR_CMR|VC_2660 [details] [associations]
symbol:VC_2660 "elongation factor P" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059
InterPro:IPR011768 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 UniPathway:UPA00345 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529
PIR:F82047 RefSeq:NP_232288.1 ProteinModelPortal:Q9KNS1
DNASU:2615677 GeneID:2615677 KEGG:vch:VC2660 PATRIC:20084340
Uniprot:Q9KNS1
Length = 188
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 84/182 (46%), Positives = 112/182 (61%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
S+N+ K G I +D P +LE +VKPGKG AF R ++R ++G +E+TF++G T E
Sbjct: 5 STNEFKGGLKIMLDNEPCVILENEYVKPGKGQAFNRVRIRKLLTGKVLEKTFKSGDTAEV 64
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
ADV + Y DG + FM+ +TFE++ + VG+ KWL E C L W G I
Sbjct: 65 ADVVDIDLDYLYNDGEFYHFMNNSTFEQLAADAKAVGENAKWLVENNTCMLTLWNGNPIA 124
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
P V+L V + DPG+KGDT G KPATL TGAVV VPLFV IG+ I VDTR+ +Y+
Sbjct: 125 VTPPNFVELEVTETDPGVKGDTQGTGGKPATLSTGAVVRVPLFVQIGEVIKVDTRSAEYV 184
Query: 227 TR 228
R
Sbjct: 185 GR 186
>TIGR_CMR|CBU_1816 [details] [associations]
symbol:CBU_1816 "translation elongation factor P"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:NP_820795.1
PDB:3TRE PDBsum:3TRE ProteinModelPortal:Q83AR4 PRIDE:Q83AR4
GeneID:1209727 KEGG:cbu:CBU_1816 PATRIC:17932367
BioCyc:CBUR227377:GJ7S-1789-MONOMER Uniprot:Q83AR4
Length = 188
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 80/183 (43%), Positives = 117/183 (63%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
S+N+ + G + VDG P +++ VKPGKG AF R K RN +G +ERTF++G T+
Sbjct: 5 STNEFRGGLKVMVDGDPCSIIDNEFVKPGKGQAFNRVKFRNLKTGRVLERTFKSGETLPA 64
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
ADV + Q+ Y DG + FM +E+ ++ V + K+WLKE C + W G +
Sbjct: 65 ADVVEVEMQYLYNDGEFWHFMTSENYEQHAASKEAVAEAKQWLKEEALCMVTMWNGVPLS 124
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
E P V+L + + +PG++GDTA+GG+K A L+TGAVV VPLF+N G+ I VDTR G+Y+
Sbjct: 125 VEPPNFVELKITETEPGVRGDTATGGTKRAKLETGAVVRVPLFLNEGEIIKVDTRRGEYV 184
Query: 227 TRA 229
+RA
Sbjct: 185 SRA 187
>TIGR_CMR|GSU_1752 [details] [associations]
symbol:GSU_1752 "translation elongation factor P"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 RefSeq:NP_952802.1 ProteinModelPortal:Q74CC2
GeneID:2685359 KEGG:gsu:GSU1752 PATRIC:22026349 OMA:DYVFMDM
ProtClustDB:PRK00529 BioCyc:GSUL243231:GH27-1728-MONOMER
Uniprot:Q74CC2
Length = 187
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 77/179 (43%), Positives = 119/179 (66%)
Query: 50 DIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV 109
D+K G + +DGAP+ V+ F KPGKG A RTK+RN ++G ++RT+R+G T E A +
Sbjct: 6 DLKKGLKLTLDGAPYLVIAFEFSKPGKGQALYRTKMRNMITGVILDRTYRSGETFEPARL 65
Query: 110 FKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFEV 169
+ Q+ YK+ + + FMD TFE+V+++E VGD K +L + ++ ++L + K I +
Sbjct: 66 EERRMQYLYKEDTHYTFMDNQTFEQVQMDEDAVGDAKNFLIDNLEVDILLFGEKAIGVTL 125
Query: 170 PITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTR 228
P V L VV DP +KGDT+ SKPAT++TG ++ VP F+ G+ I++DTR+G+Y TR
Sbjct: 126 PNFVNLRVVQTDPWVKGDTSGSDSKPATVETGYILRVPPFIEEGEMIVIDTRSGEYSTR 184
>TIGR_CMR|SPO_1244 [details] [associations]
symbol:SPO_1244 "translation elongation factor P"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
TIGRFAMs:TIGR00038 PROSITE:PS01275 ProtClustDB:PRK00529
HOGENOM:HOG000010048 RefSeq:YP_166490.1 ProteinModelPortal:Q5LU15
GeneID:3193034 KEGG:sil:SPO1244 PATRIC:23375789 OMA:EEGMTDV
Uniprot:Q5LU15
Length = 187
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 65/183 (35%), Positives = 110/183 (60%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
+ N+I+ G+ +E +G W ++ HVKPGKG AF + +LRN +G+ + FR+ VE
Sbjct: 5 NGNEIRPGNVLEHNGGLWAAVKVDHVKPGKGGAFAQVELRNLRNGSKLNERFRSADKVER 64
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
+ ++ +QF Y+ M VFMD T+E++ L +G+++ +L++GM + F++ + ++
Sbjct: 65 VRLEQKDQQFLYESDGMLVFMDAETYEQIELPADLLGERRPFLQDGMTILVEFYESEALN 124
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
+P V +V+ +P +KG TA+ KPA LD G V VP FV + I+V+T T +Y
Sbjct: 125 ATLPQKVTCKIVETEPVVKGQTAANSFKPAVLDNGVKVMVPPFVGQDEMIVVNTETMEYS 184
Query: 227 TRA 229
RA
Sbjct: 185 ERA 187
>TIGR_CMR|DET_0714 [details] [associations]
symbol:DET_0714 "translation elongation factor P"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
ProtClustDB:PRK00529 OMA:NDIRPGQ RefSeq:YP_181455.1
ProteinModelPortal:Q3Z8J4 STRING:Q3Z8J4 GeneID:3229937
KEGG:det:DET0714 PATRIC:21608491 BioCyc:DETH243164:GJNF-715-MONOMER
Uniprot:Q3Z8J4
Length = 186
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 69/183 (37%), Positives = 112/183 (61%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
+ N++K I+ + ++V++ HVK K A +R KL++ G T+E+TF++
Sbjct: 3 TGNELKKSCIIQQENGLFQVMDIQHVKM-KHTALLRLKLKDIRDGHTMEQTFQSDEKFNL 61
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIID 166
++ QF Y D +++ FMD TFE++ LN++ +GD +L E ++ ++ + I
Sbjct: 62 VNLEYRHMQFLYNDENVYHFMDDKTFEQIALNKSVLGDAVNYLLENGSVRVMTFQEEAIG 121
Query: 167 FEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYM 226
E+P +V L + +PG KGDTA+ +KPATL+TG VV VPLF+N D I VDTR+GQY+
Sbjct: 122 VELPASVNLKIAHTEPGFKGDTAATTTKPATLETGLVVQVPLFINNEDLIRVDTRSGQYL 181
Query: 227 TRA 229
+A
Sbjct: 182 GKA 184
>TIGR_CMR|APH_0547 [details] [associations]
symbol:APH_0547 "translation elongation factor P"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0003746 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043
eggNOG:COG0231 KO:K02356 InterPro:IPR020599 InterPro:IPR013185
InterPro:IPR013852 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 RefSeq:YP_505139.1
STRING:Q2GKG2 GeneID:3931310 KEGG:aph:APH_0547 PATRIC:20949754
HOGENOM:HOG000010048 OMA:NDIRPGQ BioCyc:APHA212042:GHPM-571-MONOMER
Uniprot:Q2GKG2
Length = 188
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/181 (34%), Positives = 106/181 (58%)
Query: 49 NDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEAD 108
NDI+ G ++ +GA + V++ +H +PGKG A+++ +L+N +G + FRA V A
Sbjct: 6 NDIRPGQVLDHNGALYLVVKTMHTQPGKGGAYIQAELKNLKTGAKYQERFRADGYVNRAI 65
Query: 109 VFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFE 168
+ + + Q+ + D S M+ +E++ + +GDK +L+E M LLF KG++I +
Sbjct: 66 IEEVSFQYIFGDSSSLTLMNTENYEQISIPVELLGDKSVYLQENMILTLLFHKGQVISAK 125
Query: 169 VPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTR 228
VP V L VV+ + +KG TAS K A L+ G V+VP F+ +G++I++ T Y R
Sbjct: 126 VPDYVVLEVVEAESVIKGQTASSSYKSAVLENGRRVSVPPFIKVGEKIVIYTPDDTYYER 185
Query: 229 A 229
A
Sbjct: 186 A 186
>TIGR_CMR|GSU_0465 [details] [associations]
symbol:GSU_0465 "translation elongation factor P"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043
RefSeq:NP_951524.1 ProteinModelPortal:Q74FY7 GeneID:2686244
KEGG:gsu:GSU0465 PATRIC:22023676 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 OMA:EADFERH ProtClustDB:PRK14578
BioCyc:GSUL243231:GH27-448-MONOMER InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 Uniprot:Q74FY7
Length = 187
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 62/185 (33%), Positives = 113/185 (61%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPG-KGAA-FVRTKLRNYMSGTTVERTFRAGITV 104
+++D K G I++D +P +L+ P +GA+ V+T+ RN ++G +++TFR+G V
Sbjct: 3 TTSDFKRGLVIKLDNSPCLILDVHFQSPSARGASTMVKTRYRNLLTGQVLDKTFRSGDKV 62
Query: 105 EEADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKI 164
EEAD + Q+ Y DG VFMD+ T+E+ ++ + +L +G + L ++ ++
Sbjct: 63 EEADFERHKGQYLYADGDRGVFMDMETYEQFEMDAESFQVIQPYLLDGTEVVLGLFQERL 122
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
+ + P V+LT+ D P +K TA+ +K ATL+TG + VP ++ +G++I VDTR +
Sbjct: 123 VSVDPPQVVELTITDTPPVIKNATATAQTKEATLETGLTLQVPPYLEVGEKIKVDTRDCR 182
Query: 225 YMTRA 229
+++RA
Sbjct: 183 FISRA 187
>TIGR_CMR|ECH_0777 [details] [associations]
symbol:ECH_0777 "translation elongation factor P"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] HAMAP:MF_00141 InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231 KO:K02356
InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 ProtClustDB:PRK00529 OMA:FMDNEDY
HOGENOM:HOG000010048 RefSeq:YP_507575.1 ProteinModelPortal:Q2GG58
STRING:Q2GG58 GeneID:3927069 KEGG:ech:ECH_0777 PATRIC:20576982
BioCyc:ECHA205920:GJNR-780-MONOMER Uniprot:Q2GG58
Length = 189
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 62/182 (34%), Positives = 106/182 (58%)
Query: 49 NDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEAD 108
+DI+ G +E + A + V++ +H +PGKG A+++ +++N +G FRA ++ A
Sbjct: 6 SDIRPGHVLEHNNALYLVVKVMHTQPGKGGAYIQAEMKNLKTGAKQYERFRADGDIKRAI 65
Query: 109 VFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFE 168
V + Q+ Y DGSM M L T+E++ +++ +GDK +L++ + L+F+ G+II +
Sbjct: 66 VDESDYQYIYGDGSMITIMHLKTYEQLTISKDILGDKSIYLQDNIIITLVFYNGEIISAK 125
Query: 169 VPITVQLTVVDVDPGLKGDTASGGS-KPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMT 227
VP V L VV+ + +KG T S + K A L+ ++VP F+ GD I+V T Y
Sbjct: 126 VPDYVTLQVVETEAVIKGQTVSSSAYKVAMLENNQRISVPTFIKPGDRIVVYTPDDSYYE 185
Query: 228 RA 229
RA
Sbjct: 186 RA 187
>TIGR_CMR|DET_0870 [details] [associations]
symbol:DET_0870 "translation elongation factor P"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR013852 InterPro:IPR008991
Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 RefSeq:YP_181596.1 ProteinModelPortal:Q3Z853
STRING:Q3Z853 GeneID:3229818 KEGG:det:DET0870 PATRIC:21608799
OMA:DTFEQHY ProtClustDB:CLSK837229
BioCyc:DETH243164:GJNF-871-MONOMER Uniprot:Q3Z853
Length = 188
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 62/179 (34%), Positives = 97/179 (54%)
Query: 50 DIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEADV 109
++ I +D P+ V + +KPGKG+A R K RN M G +ERT+ +G ++EADV
Sbjct: 5 EVSKNKKILLDEIPYNVDDVDFMKPGKGSAVYRIKFRNLMDGGILERTYHSGDKLKEADV 64
Query: 110 FKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFEV 169
Q+ Y + ++FM+ TFE+ + E +G + +LK+GM + I+ +
Sbjct: 65 ATYDMQYLYHENGNYIFMNTDTFEQHYMTEDRMGSRGVFLKDGMVIPVQLLGDAPIEITL 124
Query: 170 PITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQYMTR 228
P V+L +V+ +T + +KPA L G + VP F+ GD I VDTRTG Y+ R
Sbjct: 125 PNFVELEIVETSMSTGKETVTAQNKPAKLSNGMEIGVPTFIKAGDIIKVDTRTGAYVER 183
>TIGR_CMR|SO_2328 [details] [associations]
symbol:SO_2328 "translation elongation factor P"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00141
InterPro:IPR001059 InterPro:IPR011768 InterPro:IPR015365
Pfam:PF01132 Pfam:PF09285 SMART:SM00841 UniPathway:UPA00345
GO:GO:0005737 GO:GO:0003746 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
HOGENOM:HOG000010047 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
PROSITE:PS01275 OMA:DYVFMDM ProtClustDB:PRK00529 RefSeq:NP_717918.1
ProteinModelPortal:Q8EEP9 GeneID:1170052 KEGG:son:SO_2328
PATRIC:23524279 Uniprot:Q8EEP9
Length = 186
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 56/184 (30%), Positives = 106/184 (57%)
Query: 47 SSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEE 106
++++++ G+ I +G+PW V + + G+ AA V+ KL+N + + E TF+ +++
Sbjct: 3 TAHEVRPGNVIMFEGSPWVVQKTETTRSGRNAAIVKLKLKNLLLNSGTETTFKGEDKIDD 62
Query: 107 ADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMD--CNLLFWKGKI 164
+ + ++Y M+VFMD + + + ++GD ++ +GM+ C + F+ GK
Sbjct: 63 IILDRLDCTYSYFADPMYVFMD-AEYNQYDVEAENLGDAAAYIVDGMEETCQVTFYDGKA 121
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
I E+P T+ V+ +P +GDT+ KPAT+ G ++V FV +GD+I +DTRTG+
Sbjct: 122 ISVEMPTTIVREVIYTEPSARGDTSGKVMKPATITGGGTISVADFVKVGDKIEIDTRTGE 181
Query: 225 YMTR 228
+ R
Sbjct: 182 FKKR 185
>TIGR_CMR|NSE_0196 [details] [associations]
symbol:NSE_0196 "translation elongation factor P"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] InterPro:IPR001059 InterPro:IPR011768
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
UniPathway:UPA00345 GO:GO:0005737 GO:GO:0003746 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0043043 eggNOG:COG0231 KO:K02356 InterPro:IPR020599
InterPro:IPR013185 InterPro:IPR008991 Pfam:PF08207
PIRSF:PIRSF005901 SUPFAM:SSF50104 TIGRFAMs:TIGR00038
ProtClustDB:PRK00529 HOGENOM:HOG000010048 RefSeq:YP_506091.1
ProteinModelPortal:Q2GEK5 STRING:Q2GEK5 GeneID:3932195
KEGG:nse:NSE_0196 PATRIC:22680491 OMA:AIELPQR
BioCyc:NSEN222891:GHFU-227-MONOMER Uniprot:Q2GEK5
Length = 191
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/181 (34%), Positives = 104/181 (57%)
Query: 49 NDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAGITVEEAD 108
NDI+VG+ +E + ++VL+ HVKPGKG AFV ++++ + V FR+ V +A
Sbjct: 8 NDIRVGNVLEYKNSLYQVLKREHVKPGKGGAFVNVEMKSIDGASKVNHRFRSDEVVFKAF 67
Query: 109 VFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMDCNLLFWKGKIIDFE 168
+ ++ + +K+G V M L+T+E+ ++ D K+LKE + LL KI+ +
Sbjct: 68 LEEDECHYLFKEGDAIVLMSLSTYEQFSVDADLFVDVDKYLKEEVVVKLLRHGDKIVGVK 127
Query: 169 VPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAV-VNVPLFVNIGDEILVDTRTGQYMT 227
V + TV + +P +KG T + KPA L+ G + V VP F+ +GD+I+V T G Y+
Sbjct: 128 VQDNLAYTVEETEPYIKGQTVTSSYKPAILNGGLLKVMVPPFIKVGDQIVVKTEDGTYVG 187
Query: 228 R 228
R
Sbjct: 188 R 188
>UNIPROTKB|P0A6N8 [details] [associations]
symbol:yeiP "predicted dehydrogenase, NAD-dependent"
species:83333 "Escherichia coli K-12" [GO:0043043 "peptide
biosynthetic process" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003746 "translation elongation factor activity" evidence=IEA]
InterPro:IPR001059 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:U00007
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 HOGENOM:HOG000010049 OMA:FMDNEDY
ProtClustDB:PRK04542 HAMAP:MF_00646 InterPro:IPR011897
TIGRFAMs:TIGR02178 EMBL:D21148 PIR:B64986 RefSeq:NP_416676.4
RefSeq:YP_490411.1 ProteinModelPortal:P0A6N8 SMR:P0A6N8
MINT:MINT-1302160 PaxDb:P0A6N8 PRIDE:P0A6N8
EnsemblBacteria:EBESCT00000000640 EnsemblBacteria:EBESCT00000015053
GeneID:12931472 GeneID:946674 KEGG:ecj:Y75_p2134 KEGG:eco:b2171
PATRIC:32119697 EchoBASE:EB1970 EcoGene:EG12035
BioCyc:EcoCyc:EG12035-MONOMER BioCyc:ECOL316407:JW5362-MONOMER
Genevestigator:P0A6N8 Uniprot:P0A6N8
Length = 190
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 58/186 (31%), Positives = 101/186 (54%)
Query: 48 SNDIKVGSNIEVDGAPWRVLEFLHVKP-GKGAAFV-RTKLRNYMSGTTVERTFRAGITVE 105
+N+IK G + +G V + P +GAA + + + + +G VE F+ V+
Sbjct: 4 ANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVD 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEG-M-DCNLLFWKGK 163
+ + F+Y DG+ +VFMD + + + ++ ++ EG M D +L W G+
Sbjct: 64 TVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQ 123
Query: 164 IIDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTG 223
++ E+P TV L +V+ PG+KG +AS +KPATL TG V+ VP +++ G++I +
Sbjct: 124 LLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHIEER 183
Query: 224 QYMTRA 229
+YM RA
Sbjct: 184 RYMGRA 189
>TIGR_CMR|CPS_1465 [details] [associations]
symbol:CPS_1465 "elongation factor P-like protein YeiP"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR001059
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
GO:GO:0005737 GO:GO:0003746 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 RefSeq:YP_268207.1 ProteinModelPortal:Q485Q8
STRING:Q485Q8 GeneID:3522353 KEGG:cps:CPS_1465 PATRIC:21466137
HOGENOM:HOG000010049 OMA:FMDNEDY ProtClustDB:PRK04542
BioCyc:CPSY167879:GI48-1546-MONOMER HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 Uniprot:Q485Q8
Length = 191
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 55/185 (29%), Positives = 100/185 (54%)
Query: 48 SNDIKVGSNIEVDGAPWRVLEFLHVKP-GK-GAAFVRTKLRNYMSGTTVERTFRAGITVE 105
++DIK + IE +G V + P G+ G + R +L + ++G V+ TF+A +
Sbjct: 4 ASDIKKNAAIEHNGKVLIVRDITRSVPQGRAGGSLYRMRLYDVVTGGKVDETFKAEDMLN 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWL-KEGMDCNLLFWKGKI 164
AD+ + F+Y DG +VFMD + LN+ + D+ ++ +E +++
Sbjct: 64 FADLSRRPSMFSYIDGEEYVFMDNEDYTPYNLNKESIADEILFIDEETQGISVIIVDDAP 123
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
+ +P +V+L + + DP +KG +AS +KPA L TG + VP ++ GD++ V+T +
Sbjct: 124 VGIALPASVELLITETDPSIKGASASARTKPALLSTGLTIQVPEHISTGDKVKVNTEERK 183
Query: 225 YMTRA 229
+M RA
Sbjct: 184 FMGRA 188
>UNIPROTKB|Q9KSP7 [details] [associations]
symbol:VC_1209 "Elongation factor P-like protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR001059 InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285
SMART:SM00841 GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 OMA:FMDNEDY ProtClustDB:PRK04542 HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 PIR:D82229 RefSeq:NP_230854.2
ProteinModelPortal:Q9KSP7 DNASU:2614642 GeneID:2614642
KEGG:vch:VC1209 PATRIC:20081506 Uniprot:Q9KSP7
Length = 188
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/185 (24%), Positives = 98/185 (52%)
Query: 48 SNDIKVGSNIEVDGAPWRVLEFLHVKPGK--GAAFVRTKLRNYMSGTTVERTFRAGITVE 105
++++K G I +G + + PG G+ + + + +G V+ +++ ++
Sbjct: 4 ASELKKGFAIISNGKTLLIKDIEVTTPGGRGGSKIYKLRCTDLNTGARVDERYKSDDVLD 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMD-CNLLFWKGKI 164
++ K F+Y DG +VFM+ + + ++ D+ ++ E + +++ G+
Sbjct: 64 TVEMNKRPISFSYIDGDEYVFMNNDDYTPYNFKKDEIEDELLFITEEIQGMSVVLVDGEA 123
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
+ E+P +V++ + + DP +KG +AS +KPA + TG VV VP ++ GD I+++T +
Sbjct: 124 VAIELPSSVEMVIEETDPSIKGASASSRTKPARMPTGLVVQVPEYIATGDRIVINTAERK 183
Query: 225 YMTRA 229
+M RA
Sbjct: 184 FMNRA 188
>TIGR_CMR|VC_1209 [details] [associations]
symbol:VC_1209 "elongation factor P family protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR001059
InterPro:IPR015365 Pfam:PF01132 Pfam:PF09285 SMART:SM00841
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0043043 eggNOG:COG0231
KO:K02356 InterPro:IPR020599 InterPro:IPR013185 InterPro:IPR013852
InterPro:IPR008991 Pfam:PF08207 PIRSF:PIRSF005901 SUPFAM:SSF50104
PROSITE:PS01275 OMA:FMDNEDY ProtClustDB:PRK04542 HAMAP:MF_00646
InterPro:IPR011897 TIGRFAMs:TIGR02178 PIR:D82229 RefSeq:NP_230854.2
ProteinModelPortal:Q9KSP7 DNASU:2614642 GeneID:2614642
KEGG:vch:VC1209 PATRIC:20081506 Uniprot:Q9KSP7
Length = 188
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/185 (24%), Positives = 98/185 (52%)
Query: 48 SNDIKVGSNIEVDGAPWRVLEFLHVKPGK--GAAFVRTKLRNYMSGTTVERTFRAGITVE 105
++++K G I +G + + PG G+ + + + +G V+ +++ ++
Sbjct: 4 ASELKKGFAIISNGKTLLIKDIEVTTPGGRGGSKIYKLRCTDLNTGARVDERYKSDDVLD 63
Query: 106 EADVFKETKQFTYKDGSMFVFMDLTTFEEVRLNETDVGDKKKWLKEGMD-CNLLFWKGKI 164
++ K F+Y DG +VFM+ + + ++ D+ ++ E + +++ G+
Sbjct: 64 TVEMNKRPISFSYIDGDEYVFMNNDDYTPYNFKKDEIEDELLFITEEIQGMSVVLVDGEA 123
Query: 165 IDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLFVNIGDEILVDTRTGQ 224
+ E+P +V++ + + DP +KG +AS +KPA + TG VV VP ++ GD I+++T +
Sbjct: 124 VAIELPSSVEMVIEETDPSIKGASASSRTKPARMPTGLVVQVPEYIATGDRIVINTAERK 183
Query: 225 YMTRA 229
+M RA
Sbjct: 184 FMNRA 188
>DICTYBASE|DDB_G0273555 [details] [associations]
symbol:DDB_G0273555 "Elongation factor P"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0273555
dictyBase:DDB_G0273411 EMBL:AAFI02000010 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 SUPFAM:SSF50104 RefSeq:XP_644592.1 RefSeq:XP_644659.1
ProteinModelPortal:Q557H6 PRIDE:Q557H6 EnsemblProtists:DDB0168187
EnsemblProtists:DDB0217192 GeneID:8618956 GeneID:8619021
KEGG:ddi:DDB_G0273411 KEGG:ddi:DDB_G0273555 eggNOG:NOG285017
InParanoid:Q557H6 OMA:ENGRSCK ProtClustDB:CLSZ2431227
Uniprot:Q557H6
Length = 222
Score = 123 (48.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 42 RIYAFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAG 101
R ++++K G IE +++ + +H K F+ T ++N + G+ FR+
Sbjct: 30 RFQEIEASELKKGMWIEHKSKLFQIEKVVHQKVAMRGGFIITDMKNVIDGSKSNIKFRSA 89
Query: 102 ITVEEADVFKETKQF--TYKDGSMFVF--MDLTTFEE-----VRLNETDVGDKKKWLKE- 151
+E D+ + T F T KDG FVF +D EE V N + + +L
Sbjct: 90 ENIELVDLSRSTYNFVETIKDGKAFVFRRIDSEGDEEDDEDFVCTNISQLDGYSPYLSLF 149
Query: 152 GMDCNLLF--WKGKIIDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLF 209
G D F + G +IDF+ P + LT+ V L+ + + G P++
Sbjct: 150 GEDTEFHFRTYNGNVIDFKGPTQIDLTIRSVSD-LQNNNV------LHFENGRSCKGPIY 202
Query: 210 VNIGDEILVDTRTGQYMTR 228
+ GD++ + ++T+
Sbjct: 203 LKPGDKVQIRLPEEVFITK 221
>DICTYBASE|DDB_G0273411 [details] [associations]
symbol:DDB_G0273411 "Elongation factor P-like
protein" species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0273555
dictyBase:DDB_G0273411 EMBL:AAFI02000010 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR013185 InterPro:IPR008991
Pfam:PF08207 SUPFAM:SSF50104 RefSeq:XP_644592.1 RefSeq:XP_644659.1
ProteinModelPortal:Q557H6 PRIDE:Q557H6 EnsemblProtists:DDB0168187
EnsemblProtists:DDB0217192 GeneID:8618956 GeneID:8619021
KEGG:ddi:DDB_G0273411 KEGG:ddi:DDB_G0273555 eggNOG:NOG285017
InParanoid:Q557H6 OMA:ENGRSCK ProtClustDB:CLSZ2431227
Uniprot:Q557H6
Length = 222
Score = 123 (48.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 47/199 (23%), Positives = 86/199 (43%)
Query: 42 RIYAFSSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKLRNYMSGTTVERTFRAG 101
R ++++K G IE +++ + +H K F+ T ++N + G+ FR+
Sbjct: 30 RFQEIEASELKKGMWIEHKSKLFQIEKVVHQKVAMRGGFIITDMKNVIDGSKSNIKFRSA 89
Query: 102 ITVEEADVFKETKQF--TYKDGSMFVF--MDLTTFEE-----VRLNETDVGDKKKWLKE- 151
+E D+ + T F T KDG FVF +D EE V N + + +L
Sbjct: 90 ENIELVDLSRSTYNFVETIKDGKAFVFRRIDSEGDEEDDEDFVCTNISQLDGYSPYLSLF 149
Query: 152 GMDCNLLF--WKGKIIDFEVPITVQLTVVDVDPGLKGDTASGGSKPATLDTGAVVNVPLF 209
G D F + G +IDF+ P + LT+ V L+ + + G P++
Sbjct: 150 GEDTEFHFRTYNGNVIDFKGPTQIDLTIRSVSD-LQNNNV------LHFENGRSCKGPIY 202
Query: 210 VNIGDEILVDTRTGQYMTR 228
+ GD++ + ++T+
Sbjct: 203 LKPGDKVQIRLPEEVFITK 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 229 217 0.00090 112 3 11 22 0.39 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 595 (63 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.25u 0.11s 17.36t Elapsed: 00:00:01
Total cpu time: 17.25u 0.11s 17.36t Elapsed: 00:00:01
Start: Thu May 9 21:31:00 2013 End: Thu May 9 21:31:01 2013