BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027060
(229 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTC5|YIDE_SCHPO Putative uridine kinase C227.14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC227.14 PE=3 SV=1
Length = 235
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 109 IVGLAGPPGAGKSTLAAEVVR--------RINKIWPQKASSFDSQD------PKEAHARR 154
++GLAG PG+GKSTL A + + I KI P + ++ P++A A R
Sbjct: 31 LIGLAGGPGSGKSTLCAILAKAWNERFGSEIVKIIPMDGFHYSLEELDRFDNPEKARALR 90
Query: 155 GAPWTFNPLLLLNCLKNLR--NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLF 212
GA WTF+ L + ++ ++ +YAPSFDH +GDPV DDI V +++++I +GNYL
Sbjct: 91 GAEWTFDADLFYSLVRLMKKITDRELYAPSFDHAIGDPVVDDICVEPKNRILIFEGNYLL 150
Query: 213 LDGGVWKDVSSMFDEK 228
L+ W D ++D K
Sbjct: 151 LNKPPWSDACKLYDIK 166
>sp|P11664|YGGC_ECOLI Uncharacterized protein YggC OS=Escherichia coli (strain K12)
GN=yggC PE=4 SV=2
Length = 237
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 43/175 (24%)
Query: 78 VEARCMDEVYDALAQRLLPTSALASNVNVKH--IVGLAGPPGAGKSTLAAEVVRRINKIW 135
++A+ +E + + + LL A VN + +V L PPG GKSTL W
Sbjct: 12 IQAQYQNEEIENVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTT--------FW 63
Query: 136 PQKASSFDSQDPK-------------------EAHARR---GAPWTFNPLLLLNCLKNLR 173
A QDP+ +AH R GAP TF+ + +NLR
Sbjct: 64 EYLAQ----QDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFD---VAKLTENLR 116
Query: 174 N--QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMFD 226
+G P +D DPVED + V +VIV+GN+L LD W +++S D
Sbjct: 117 QVVEGDCTWPQYDRQKHDPVEDALHVTA--PLVIVEGNWLLLDDEKWLELASFCD 169
>sp|C5DNG5|YFH7_LACTC ATP-dependent kinase YFH7 OS=Lachancea thermotolerans (strain ATCC
56472 / CBS 6340 / NRRL Y-8284) GN=YFH7 PE=3 SV=1
Length = 347
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 77/202 (38%), Gaps = 51/202 (25%)
Query: 75 IPVVEARCMDEVYDAL-----AQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVV- 128
IP E + + +V + Q P + N + +VG+ G P + + A +
Sbjct: 81 IPKFEEKSLHDVQNGFFNHVQDQDFQPKKFVDKNDGSEVVVGIGGLPNSIRVENVAPLEP 140
Query: 129 ----RRINKIWPQKA--------SSFDSQDPKEAHARRGAPWTFN--------PLLLLNC 168
+I KI P FD DP EAH RRG+P TF+ LL C
Sbjct: 141 SNHDYKIAKIVPMDGFHLSRRHLDHFD--DPVEAHRRRGSPPTFDSNNCLQLCKLLAKTC 198
Query: 169 L--------KNLRNQG---------------SVYAPSFDHGVGDPVEDDILVGLQHKVVI 205
K + G S+Y P FDH + DP V ++++
Sbjct: 199 TIKPTLPVNKTTADTGTLFDKISDTFSESVPSIYVPGFDHALKDPSTGQHCVDAFTRIIV 258
Query: 206 VDGNYLFLDGGVWKDVSSMFDE 227
++G YL LD W+D+ F +
Sbjct: 259 LEGLYLLLDEDNWRDIYPTFKD 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 85 EVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
E + LA ++L + N + V + GPPG+GKST++ ++ IN +
Sbjct: 4 ETAEGLADQVLKFLSDKLETNYRVAVIVVGPPGSGKSTISEKLCHEINSRY 54
>sp|C5DXG0|YFH7_ZYGRC ATP-dependent kinase YFH7 OS=Zygosaccharomyces rouxii (strain ATCC
2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229)
GN=YFH7 PE=3 SV=1
Length = 375
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 27/114 (23%)
Query: 137 QKASSFDSQDPKEAHARRGAPWTFNPLLLLNCLKNLRNQGS------------------- 177
Q SSF Q+P+EAH RRG+P TF+ K L +
Sbjct: 195 QCLSSF--QNPQEAHKRRGSPPTFDSNNFAQLCKTLAQTCTIKPGSCDAKSCFEFMAKTY 252
Query: 178 ------VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMF 225
+ P FDH + DP D + ++VI++G YL D W+ V +
Sbjct: 253 DPHFPCIKIPGFDHSLKDPTPDQFCLNGHTRIVILEGLYLLYDKENWQRVHEIL 306
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 88 DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRIN 132
DALA + + N + + + GPPG+GKST+A ++ R+IN
Sbjct: 40 DALANEAIGLLDQCKDDNYRVCILIVGPPGSGKSTVAQDLSRQIN 84
>sp|B2G996|COAA_LACRJ Pantothenate kinase OS=Lactobacillus reuteri (strain JCM 1112)
GN=coaA PE=3 SV=1
Length = 307
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----PKEAHARRGA- 156
S + + +I+G+AG GKST+A + +NK+ P K + D P RRG
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKRVELMTTDGFLYPNAELKRRGIM 137
Query: 157 -----PWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-N 209
P +++ LL L +++ + V AP++ H V D D LV ++IV+G N
Sbjct: 138 DRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDKPLVIDSPDILIVEGIN 197
Query: 210 YLFLDGGVWKDVSSMFD 226
L L VS FD
Sbjct: 198 TLQLPSNQQLYVSDYFD 214
>sp|A5VLY5|COAA_LACRD Pantothenate kinase OS=Lactobacillus reuteri (strain DSM 20016)
GN=coaA PE=3 SV=1
Length = 307
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----PKEAHARRGA- 156
S + + +I+G+AG GKST+A + +NK+ P K + D P RRG
Sbjct: 78 STMRIPYIIGIAGSVAVGKSTIARLISILLNKMLPDKRVELMTTDGFLYPNAELKRRGIM 137
Query: 157 -----PWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-N 209
P +++ LL L +++ + V AP++ H V D D LV ++IV+G N
Sbjct: 138 DRKGFPESYDMERLLKFLNDVKAGEPVVKAPTYSHQVYDVQLDKPLVIDSPDILIVEGIN 197
Query: 210 YLFLDGGVWKDVSSMFD 226
L L VS FD
Sbjct: 198 TLQLPSNQQLYVSDYFD 214
>sp|P43591|YFH7_YEAST ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YFH7 PE=1 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQTI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|A7A245|YFH7_YEAS7 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
YJM789) GN=YFH7 PE=3 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQTI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|B5VI33|YFH7_YEAS6 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
AWRI1631) GN=YFH7 PE=3 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQTI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|C7GYB3|YFH7_YEAS2 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
JAY291) GN=YFH7 PE=3 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQKI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|B3LUL5|YFH7_YEAS1 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=YFH7 PE=3 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQTI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|C8Z7U0|YFH7_YEAS8 ATP-dependent kinase YFH7 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=YFH7 PE=3 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 29/106 (27%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNLRNQG---------------------------- 176
+DP+ AH RRG+P TF+ L K L
Sbjct: 175 KDPQTAHKRRGSPSTFDSNNFLQLCKILAKTSLCKVSSHHKFYSTSSVFEKLSKTFSQTI 234
Query: 177 -SVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDV 221
++ P F+H + DP D + ++VI++G YL D WK +
Sbjct: 235 PDIFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKI 280
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 105 NVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDP 147
N + V L G PG+GKST+A E+ + IN +K +F S+ P
Sbjct: 22 NYRVCVILVGSPGSGKSTIAEELCQIIN----EKYHTFLSEHP 60
>sp|B2GEA0|COAA_LACF3 Pantothenate kinase OS=Lactobacillus fermentum (strain NBRC 3956 /
LMG 18251) GN=coaA PE=3 SV=1
Length = 307
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 24/152 (15%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAH 151
S+ + +I+G+AG GKST A + + ++ P + + D +
Sbjct: 78 SSRRIPYIIGIAGSVAVGKSTTARLLQILLKRLMPDRRIEMITTDGFLYPNAELKRRGIM 137
Query: 152 ARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-N 209
AR+G P +++ LL + ++ + V AP++ H V D +ED + ++IV+G N
Sbjct: 138 ARKGFPESYDMDRLLTFMNDVNAGEDQVTAPTYSHSVYDVMEDHPQTIYKPDILIVEGIN 197
Query: 210 YL------------FLDGGVWKDVSSMFDEKW 229
L F D V+ D + EKW
Sbjct: 198 VLQLPTTQRLFVSDFFDFSVYVDADASLVEKW 229
>sp|Q1WRY7|COAA_LACS1 Pantothenate kinase OS=Lactobacillus salivarius (strain UCC118)
GN=coaA PE=3 SV=1
Length = 306
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----PKEAHARR------G 155
V I+G+AG GKST A + +++++P K + D P + RR G
Sbjct: 82 VPFILGIAGSVAVGKSTTARLLQSLLSEVYPDKKVQLITTDGFLYPNQELKRRNLMERKG 141
Query: 156 APWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-NYL--- 211
P +++ LL + +++N AP + H V D V+ + ++IV+G N L
Sbjct: 142 FPESYDMRRLLRFVNDVKNNLPAKAPVYSHKVYDIVKGQYEIVESPDILIVEGINVLQLP 201
Query: 212 ---------FLDGGVWKDVSSMFDEKW 229
F D ++ D E+W
Sbjct: 202 TNQQIYVSDFFDFSIYVDAEESLIEEW 228
>sp|Q750K6|YFH7_ASHGO ATP-dependent kinase YFH7 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YFH7 PE=3 SV=1
Length = 334
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 27/97 (27%)
Query: 151 HARRGAPWTFNPLLLLNCLKNL----------RNQGS---------------VYAPSFDH 185
H RRGAPWTF+ L K L R +G + P FDH
Sbjct: 166 HKRRGAPWTFDSNNYLQLCKLLAATCKWKPAKRPKGETLMETICDTFAQCPVISYPGFDH 225
Query: 186 GVGDPVEDD-ILVGLQHKVVIVDGNYLFLDGGVWKDV 221
DPV D +L G +V+I DG YL D W +
Sbjct: 226 AAKDPVRDQHVLTGFT-RVLIFDGLYLLYDQENWAHI 261
>sp|B3W953|COAA_LACCB Pantothenate kinase OS=Lactobacillus casei (strain BL23) GN=coaA
PE=3 SV=1
Length = 308
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----PKEAHARR 154
+ N + I+G+AG GKST A + +++ +P+K + D P RR
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKRVQQMTTDGFLYPNAELERR 135
Query: 155 GA------PWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVD 207
G P +++ LL++ + N++N G++ AP + H + D V + + + ++IV+
Sbjct: 136 GILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIVPGEYELIDRPDILIVE 195
Query: 208 G-NYL------------FLDGGVWKDVSSMFDEKW 229
G N L + D ++ D + E+W
Sbjct: 196 GINVLQLPSKQPIYVSDYFDFSIYVDANPDLIEQW 230
>sp|Q036Y4|COAA_LACC3 Pantothenate kinase OS=Lactobacillus casei (strain ATCC 334)
GN=coaA PE=3 SV=1
Length = 308
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 99 ALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----PKEAHARR 154
+ N + I+G+AG GKST A + +++ +P+K + D P RR
Sbjct: 76 GMQRNPHTPFIIGIAGSVAVGKSTTARLLQLLLSRAYPEKRVQQMTTDGFLYPNAELERR 135
Query: 155 GA------PWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVD 207
G P +++ LL++ + N++N G++ AP + H + D V + + + ++IV+
Sbjct: 136 GILDRKGFPESYDMELLIHFMNNVKNASGALRAPKYSHQIYDIVPGEYELIDRPDILIVE 195
Query: 208 G-NYL------------FLDGGVWKDVSSMFDEKW 229
G N L + D ++ D + E+W
Sbjct: 196 GINVLQLPSKQPIYVSDYFDFSIYVDANPDLIEQW 230
>sp|Q38ZE2|COAA_LACSS Pantothenate kinase OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=coaA PE=3 SV=1
Length = 309
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G+AG GKST A + +++++P K + D K ++G P
Sbjct: 87 IIGIAGSVAVGKSTTARLLQLLLSRVYPDKTVQMITTDGFLYSTSELKQKGILDKKGFPE 146
Query: 159 TFN-PLLL--LNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-NYL--- 211
+++ P L+ LN +KN N V AP + H + D + D+ + ++IV+G N L
Sbjct: 147 SYDMPQLISFLNAVKN--NVAPVKAPKYSHQIYDIIPDEFDIIDDPDILIVEGINVLQLP 204
Query: 212 ---------FLDGGVWKDVSSMFDEKW 229
F D V+ D + EKW
Sbjct: 205 TTEQIYVSDFFDFSVYVDANPSLIEKW 231
>sp|Q839J7|COAA_ENTFA Pantothenate kinase OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=coaA PE=3 SV=1
Length = 307
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 24/145 (16%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G+AG GKST A + R + + + ++ + D + R+G P
Sbjct: 85 IIGIAGSVAVGKSTTARLLQRILARTFKRRNVQLITTDGFLYPNKVLEEQGIMDRKGFPE 144
Query: 159 TFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-NYL----- 211
+++ L+N L +++ + + AP + H V D +E + + Q ++IV+G N L
Sbjct: 145 SYDMEKLINFLNEVKSGKDEIKAPVYSHSVYDVIEGEYELIQQPDILIVEGINTLQLPAN 204
Query: 212 -------FLDGGVWKDVSSMFDEKW 229
F D ++ D EKW
Sbjct: 205 QQIYVSDFFDFSIFVDADPALIEKW 229
>sp|Q5M4T8|COAA_STRT2 Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=coaA PE=3 SV=1
Length = 306
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G++G GKST + + + + +P+ + D K R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKVDMVTTDGFLFPNQVLIDKGILNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDG 215
+++ LLLN L ++N G V P + H + DI+ GL K I N+L ++G
Sbjct: 146 SYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK--ISQPNFLIVEG 195
>sp|Q5M079|COAA_STRT1 Pantothenate kinase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=coaA PE=3 SV=1
Length = 306
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G++G GKST + + + + +P+ + D K R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKVDMVTTDGFLFPNQVLIDKGILNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDG 215
+++ LLLN L ++N G V P + H + DI+ GL K I N+L ++G
Sbjct: 146 SYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK--ISQPNFLIVEG 195
>sp|Q03L30|COAA_STRTD Pantothenate kinase OS=Streptococcus thermophilus (strain ATCC
BAA-491 / LMD-9) GN=coaA PE=3 SV=1
Length = 306
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G++G GKST + + + + +P+ + D K R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLQRTFPKAKVDMVTTDGFLFPNQVLIDKGILNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDG 215
+++ LLLN L ++N G V P + H + DI+ GL K I N+L ++G
Sbjct: 146 SYDMPLLLNFLDTVKNGGDVNIPVYSHEIY-----DIVPGLTQK--ISQPNFLIVEG 195
>sp|P54556|COAA_BACSU Pantothenate kinase OS=Bacillus subtilis (strain 168) GN=coaA PE=3
SV=2
Length = 319
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 103 NVNVKH--------IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD-------- 146
NV +KH I+G+AG GKST A + + ++++ + S + D
Sbjct: 77 NVFLKHPHSAKIPFIIGIAGSVAVGKSTTARILQKLLSRLPDRPKVSLITTDGFLFPTAE 136
Query: 147 --PKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKV 203
K +R+G P +++ LL L +L++ + SV AP + H D E V Q +
Sbjct: 137 LKKKNMMSRKGFPESYDVKALLEFLNDLKSGKDSVKAPVYSHLTYDREEGVFEVVEQADI 196
Query: 204 VIVDG 208
VI++G
Sbjct: 197 VIIEG 201
>sp|A1SF33|COAA_NOCSJ Pantothenate kinase OS=Nocardioides sp. (strain BAA-499 / JS614)
GN=coaA PE=3 SV=1
Length = 329
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKAS-SFDSQD----PKEAHARRGA------P 157
++GLAG GKST A V++ + WPQ + + + D P RRG P
Sbjct: 102 VIGLAGSVAVGKST-TARVLQEMLAHWPQHPNVALVTTDGFLYPNAELERRGLLERKGFP 160
Query: 158 WTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
+++ LL + ++++ + V AP++ H V D V D+ +V + +VIV+G
Sbjct: 161 ESYDRRALLKFVVDIKSGKDEVLAPTYSHLVYDVVPDEKVVIRRPDIVIVEG 212
>sp|Q9Z7H0|URK_CHLPN Uridine kinase OS=Chlamydia pneumoniae GN=udk PE=3 SV=1
Length = 222
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 111 GLAGPPGAGKSTLAAEVVRRINKIWPQKASSF--DSQDPKEAH----ARRGAPW----TF 160
G+ G GAGK+TL + I +I+ + S D+ +H R W F
Sbjct: 10 GITGGSGAGKTTLT----QNIKEIFGEDVSVICQDNYYKDRSHYTPEERANLIWDHPDAF 65
Query: 161 NPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLF 212
+ LL++ +K L+N V AP FD +G+ + +I KV++V+G +F
Sbjct: 66 DNDLLISDIKRLKNNEIVQAPVFDFVLGNRSKTEIETIYPSKVILVEGILVF 117
>sp|Q6CNA8|YFH7_KLULA ATP-dependent kinase YFH7 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YFH7 PE=3 SV=1
Length = 353
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 87 YDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
YDAL + L N N + +G+ GPPG+GKST+A ++ +IN +
Sbjct: 4 YDALVDQALQLLEQNINKNYRVCIGIIGPPGSGKSTVAEKLKEKINSRY 52
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 34/83 (40%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLK--------------------NLRNQGSVYA---- 180
+DP AH RRG+P+TF+ L K N N S++
Sbjct: 165 KDPTVAHLRRGSPFTFDSNNFLQLCKVLSKTCSLDPNYHSTGPETVNEDNTNSLFDNVTN 224
Query: 181 ----------PSFDHGVGDPVED 193
P FDH + DPV D
Sbjct: 225 SFIDLPEISFPGFDHAIKDPVAD 247
>sp|Q9KDD8|URK_BACHD Uridine kinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM
18197 / FERM 7344 / JCM 9153 / C-125) GN=udk PE=3 SV=1
Length = 211
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINK---IWPQKASSFDSQDPKEAHARRGA----PWTFN 161
I+G+AG G+GK+T+A E+ + N+ + ++ + + Q R P F+
Sbjct: 7 IIGVAGGTGSGKTTVAKEIFYQFNEKSIVLIEQDAYYKDQSQLSLEERLQTNYDHPLAFD 66
Query: 162 PLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
LL+ L +L N ++ P +D+ + + ILV + V+I++G L D
Sbjct: 67 NDLLIEHLHSLLNGQAIEKPVYDYKLHTRSNEVILVEPK-DVIILEGILLLED 118
>sp|A8AX56|COAA_STRGC Pantothenate kinase OS=Streptococcus gordonii (strain Challis /
ATCC 35105 / CH1 / DL1 / V288) GN=coaA PE=3 SV=1
Length = 306
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRGAPW 158
I+G++G GKST + + +++ + + D + R+G P
Sbjct: 86 IIGVSGSVAVGKSTTSRLLQILLSRTFENAKVELVTTDGFLYPNSVLQEHDLLNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGN--------- 209
++N LLLN L +L+N + P + H + D V D VIV+G
Sbjct: 146 SYNMELLLNFLDHLKNGQNYQVPVYSHEIYDIVPDQTQTIQVADFVIVEGINVFQNPQNE 205
Query: 210 --YL--FLDGGVWKDVSSMFDEKW 229
Y+ F D ++ D EKW
Sbjct: 206 RLYITDFFDFSIYVDAEVENIEKW 229
>sp|Q9VC99|UCK_DROME Probable uridine-cytidine kinase OS=Drosophila melanogaster
GN=CG6364 PE=3 SV=1
Length = 260
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 83 MDEVYDALAQRLLPTSALASNVNVK--HIVGLAGPPGAGKSTLAAEVVRRINKI---WPQ 137
M ++ +A RL A+N VK ++G+AG +GKST+ +++ ++ + Q
Sbjct: 1 MQDLRNADTLRLPNGDGAAANDEVKSPFLIGVAGGTASGKSTVCKKIMEQLGQAEMDHTQ 60
Query: 138 KASSFDSQD--------PKEAHARRGA-----PWTFNPLLLLNCLKNLRNQGSVYAPSFD 184
+ SQD ++A A++G P FN L+ + L+N+ V PS+D
Sbjct: 61 RQVVSISQDSFYRELTPAEKAKAQKGLFNFDHPDAFNEELMYSTLQNILKGHKVEIPSYD 120
Query: 185 HGVGDPVEDDILVGLQHKVVIVDGNYLF 212
+ +++LV VV+ +G +F
Sbjct: 121 YRTNSLDFENVLVIYPADVVLFEGILVF 148
>sp|A7TQF3|YFH7_VANPO ATP-dependent kinase YFH7 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=YFH7 PE=3 SV=1
Length = 359
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 33/114 (28%)
Query: 145 QDPKEAHARRGAPWTFNPLLLLNCLKNL-----------RNQGS---------------- 177
+DP AH RRG+P TF+ L K L R Q S
Sbjct: 177 KDPVNAHRRRGSPSTFDSNNFLQLCKLLAETSNTKIPLSRFQNSDNDDVDAVWEKLAKTF 236
Query: 178 ------VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSMF 225
+Y P FDH + DP + + +++I +G YL D W + +
Sbjct: 237 TSDVQDIYIPGFDHSLKDPTSNQYCINGFTRIMIFEGLYLLYDQENWSKIYQVL 290
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 88 DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQ 137
D L L A + N + + + GPPG+GKST+A E+ R+N ++ +
Sbjct: 5 DGLVSDSLKLLADRVDKNYRISLVIVGPPGSGKSTIANELCERLNSMFHE 54
>sp|P37101|KPPR_SYNY3 Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=prk PE=2 SV=1
Length = 332
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQK---------ASSFDSQDPKEAHARRGAPWT 159
++G+AG G GKST +RR+ ++ ++ S D Q K A P
Sbjct: 10 LIGVAGDSGCGKSTF----LRRLTDLFGEEFMTVICLDDYHSLDRQGRKAAGVTALDPRA 65
Query: 160 FNPLLLLNCLKNLRNQGSVYAPSFDHGVG--DPVEDDILVGLQHKVVIVDGNY------- 210
N L+ +K L++ S+ P ++H G DP E +KVV+++G +
Sbjct: 66 NNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPPEK----VEPNKVVVIEGLHPLYDERV 121
Query: 211 -LFLDGGVWKDVSSMFDEKW 229
+D GV+ D+S W
Sbjct: 122 RELVDFGVYLDISEEVKINW 141
>sp|Q03PP4|COAA_LACBA Pantothenate kinase OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=coaA PE=3 SV=1
Length = 307
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 24/148 (16%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD----------PKEAHARRG 155
V I+G+AG GKST A + +N + + + D + AR+G
Sbjct: 82 VPFIIGIAGSVAVGKSTAARLLEVLLNHYFTDQRIQLITTDGFLYSNEELKKRNLMARKG 141
Query: 156 APWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG-NYL-- 211
P +++ L+ L +++ + + AP + H V D V D + V+IV+G N L
Sbjct: 142 FPESYDMTALIQFLNDVKAGKELIKAPVYSHKVYDIVPDQFDYIMHPDVLIVEGINTLQL 201
Query: 212 ----------FLDGGVWKDVSSMFDEKW 229
F D ++ D E W
Sbjct: 202 PTNEQIYVSDFTDFSIYVDADPTLIESW 229
>sp|Q1D9X8|COAA_MYXXD Pantothenate kinase OS=Myxococcus xanthus (strain DK 1622) GN=coaA
PE=3 SV=1
Length = 317
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 102 SNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQK-------ASSF----DSQDPKEA 150
S V +I+ +AG GKST A +++ + K WP F D ++
Sbjct: 83 STQKVPYIIAIAGSVAVGKST-TARILQALLKRWPDHPRVELVTTDGFLFPNDVLTERDL 141
Query: 151 HARRGAPWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
R+G P +++ L+ L L+ + V AP + H V D V + V Q ++I++G
Sbjct: 142 MKRKGFPESYDRRALVRFLAELKAGRAEVAAPVYSHLVYDVVPGEAQVVRQPDILILEG 200
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 100 LASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQ--KASSFDSQDPKEAHARRGA 156
L+ +V GL GP GAGKST+A + + IWP K + D P A ARRG
Sbjct: 26 LSFSVARGECFGLLGPNGAGKSTIARML---LGMIWPDRGKITVLDEPVPSRARARRGV 81
>sp|Q9K8X7|COAA_BACHD Pantothenate kinase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=coaA PE=3
SV=1
Length = 316
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINKIWPQK-------ASSF----DSQDPKEAHARRGAP 157
I+GLAG GKST A +++++ K WP+ F ++ + + ++G P
Sbjct: 90 IIGLAGSVAVGKST-TARLLQKLLKAWPEHHHVDLVTTDGFLYPNETLEARGLMDKKGFP 148
Query: 158 WTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
+++ L+ L +++ + V AP + H + VE D V + +VIV+G
Sbjct: 149 ESYDLPALIRFLSDVKAGEPYVKAPVYSHLTYNIVEGDYQVVHEPDIVIVEG 200
>sp|C0ZAS6|URK_BREBN Uridine kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=udk PE=3 SV=1
Length = 214
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRINK---IWPQKASSFDSQ---DPKE-AHARRGAPWTFN 161
++G+AG G+GK+T+A E+ R+ ++ S + Q P+E A P+ F+
Sbjct: 6 LIGVAGGSGSGKTTVAKELYRQFQNDSVTMIEQDSYYKDQSHLSPEERALTNYDHPFAFD 65
Query: 162 PLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLD 214
LLL L+ L ++ P +D V + + I V + V+I++G + D
Sbjct: 66 NDLLLAHLQELMQGKAIQKPIYDFKVHNRKPEQIQVDPK-DVIILEGMLILED 117
>sp|C0M9A7|COAA_STRE4 Pantothenate kinase OS=Streptococcus equi subsp. equi (strain 4047)
GN=coaA PE=3 SV=1
Length = 306
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 109 IVGLAGPPGAGKST---LAAEVVRRINKIWPQKASSFD-------SQDPKEAHARRGAPW 158
I+G++G GKST L ++ R +K + + D + R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLARTHKTSTVELVTTDGFLYPNSTLIKNNMLNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG---------N 209
++N LLLN L ++ + AP + H + D V D +I++G N
Sbjct: 146 SYNMELLLNFLDTVKGGQTASAPVYSHEIYDIVPDQQQTFTNPDFLIIEGINVFQNQQNN 205
Query: 210 YLFL----DGGVWKDVSSMFDEKW 229
L++ D ++ D S E+W
Sbjct: 206 RLYMSDYFDFSIYIDADSHHIEQW 229
>sp|B4U2S2|COAA_STREM Pantothenate kinase OS=Streptococcus equi subsp. zooepidemicus
(strain MGCS10565) GN=coaA PE=3 SV=1
Length = 306
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 109 IVGLAGPPGAGKST---LAAEVVRRINKIWPQKASSFD-------SQDPKEAHARRGAPW 158
I+G++G GKST L ++ R +K + + D + R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLARTHKTSTVELVTTDGFLYPNSTLIKNNMLNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG---------N 209
++N LLLN L ++ + AP + H + D V D +I++G N
Sbjct: 146 SYNMELLLNFLDTVKGGQTASAPVYSHEIYDIVPDQQQTFTNPDFLIIEGINVFQNQQNN 205
Query: 210 YLFL----DGGVWKDVSSMFDEKW 229
L++ D ++ D S E+W
Sbjct: 206 RLYMSDYFDFSIYIDADSHHIEQW 229
>sp|C0MG55|COAA_STRS7 Pantothenate kinase OS=Streptococcus equi subsp. zooepidemicus
(strain H70) GN=coaA PE=3 SV=1
Length = 306
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 109 IVGLAGPPGAGKST---LAAEVVRRINKIWPQKASSFD-------SQDPKEAHARRGAPW 158
I+G++G GKST L ++ R +K + + D + R+G P
Sbjct: 86 IIGISGSVAVGKSTTSRLLQLLLARTHKTSTVELVTTDGFLYPNSTLIKNNMLNRKGFPE 145
Query: 159 TFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG---------N 209
++N LLLN L ++ + AP + H + D V D +I++G N
Sbjct: 146 SYNMELLLNFLDTVKGGQTASAPVYSHEIYDIVPDQQQTFTNPDFLIIEGINVFQNQQNN 205
Query: 210 YLFL----DGGVWKDVSSMFDEKW 229
L++ D ++ D S E+W
Sbjct: 206 RLYMSDYFDFSIYIDADSHHIEQW 229
>sp|Q3SWF3|COAA_NITWN Pantothenate kinase OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=coaA PE=3 SV=1
Length = 318
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 86 VYDALAQRLLPTSALASNVN---VKHIVGLAGPPGAGKSTLAAEVVRRINKIW-PQKASS 141
+Y A QRL ++ V +I+G+AG GKST A V++ + W P+
Sbjct: 65 IYVAAMQRLFVAQRQFLGIHDRKVPYIIGVAGSVAVGKST-TARVLQALLARWSPRPKVE 123
Query: 142 FDSQD----PKEAHARRGA------PWTFNPLLLLNCLKNLR-NQGSVYAPSFDHGVGDP 190
+ D P RRG P +++ +LL+ L +++ + V AP + H D
Sbjct: 124 LVTTDGFLLPNAVLERRGLMQKKGFPESYDLPMLLSFLSDIKAGRAPVRAPVYSHLTYDI 183
Query: 191 VEDDILVGLQHKVVIVDGNYLFLDGGVWKD------VSSMFD 226
V D + ++IV+G + G + +D VS FD
Sbjct: 184 VPDSWIEVSHPDILIVEGVNVLQTGPLPRDGRAIPVVSDFFD 225
>sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5 OS=Arabidopsis thaliana GN=UKL5 PE=2
SV=1
Length = 465
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 109 IVGLAGPPGAGKSTLAAEVVRRIN--KIWPQKASSFDSQDPKEA-----HARRGAPWTFN 161
++G+AG +GK+T+ ++ +++ ++ SF KE P FN
Sbjct: 31 VIGVAGGTASGKTTVCNMIMSQLHDQRVVLVNQDSFYHSLTKEKLNKVHEYNFDHPDAFN 90
Query: 162 PLLLLNCLKNLRNQGSVYAPSFDHGVGDPVE 192
+LL+C++ LR+ V PS+D + +E
Sbjct: 91 TEVLLSCMEKLRSGQPVNIPSYDFKIHQSIE 121
>sp|Q59YV0|LONP2_CANAL Lon protease homolog 2, peroxisomal OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=CaO19.6973 PE=3 SV=1
Length = 1258
Score = 36.2 bits (82), Expect = 0.17, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 81 RCMDEVYDALAQRLLPT--SALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQK 138
+ + E ++ +++P+ S S N I+ LAGPPG GK++LA + + + + Q+
Sbjct: 693 KSITEAKTNVSTKMVPSNESIQVSKNNKSPIIMLAGPPGTGKTSLAKSIASALGRNF-QR 751
Query: 139 ASSFDSQDPKEAHARRGAPWTFNPLLLLNCLKNLR 173
S +D E R P LL+ L+ R
Sbjct: 752 ISLGGIKDESEIRGHRRTYVGAMPGLLIQALRKSR 786
>sp|O58012|Y274_PYRHO Putative GTPase PH0274 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0274
PE=3 SV=1
Length = 317
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 108 HIVGLAGPPGAGKSTLAAEVVRR 130
HIVG+ GPPGAGKSTL ++++
Sbjct: 48 HIVGITGPPGAGKSTLLDKLIKE 70
>sp|A1T0P0|COAA_PSYIN Pantothenate kinase OS=Psychromonas ingrahamii (strain 37) GN=coaA
PE=3 SV=1
Length = 322
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 31/159 (19%)
Query: 101 ASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKAS-SFDSQD-----PKEAHAR- 153
+ N NV +I+G+AG GKST A +++ I WP+ + + D +E AR
Sbjct: 88 SKNENVPYIIGIAGSVAVGKST-TARILQAILSHWPEHPRVALVTTDGFLRPNRELVARN 146
Query: 154 ----RGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
+G P +F+ L++ + +++ + + AP + H D + D L + +VI++G
Sbjct: 147 IMHKKGFPESFDTKALIDFVAAIKSGKELISAPIYSHLTYDILPDKKLHLEKPDIVILEG 206
Query: 209 --------NY----------LFLDGGVWKDVSSMFDEKW 229
NY F+D ++ D + +KW
Sbjct: 207 LNVLQSASNYPDHPQRTFVSDFVDFSIFVDAETQLLKKW 245
>sp|Q2NWS4|COAA_SODGM Pantothenate kinase OS=Sodalis glossinidius (strain morsitans)
GN=coaA PE=3 SV=1
Length = 316
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 106 VKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQ-KASSFDSQD----------PKEAHARR 154
+ +I+G+AG GKST A V++ + WP+ + + D ++ ++
Sbjct: 87 IPYIIGIAGSVAVGKST-TARVLQALLSRWPEHRTVELVTTDGFLHPNSVLKQRDLMKKK 145
Query: 155 GAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDG 208
G P +++ L+N + +++ V AP + H + D V D+ V Q ++I++G
Sbjct: 146 GFPESYDIRSLVNFVSKVKSGTPRVTAPVYSHLIYDVVPDEQKVISQPDILILEG 200
>sp|A3CMP3|COAA_STRSV Pantothenate kinase OS=Streptococcus sanguinis (strain SK36)
GN=coaA PE=3 SV=1
Length = 306
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 109 IVGLAGPPGAGKSTLA---------------AEVVRRINKIWPQKASSFDSQDPKEAHAR 153
I+G++G GKST + E+V ++P K + + + R
Sbjct: 86 IIGVSGSVAVGKSTTSRLLQILLSRTFSNATVELVTTDGFLFPNK-----TLEDHDILNR 140
Query: 154 RGAPWTFNPLLLLNCLKNLRNQGSVYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLF 212
+G P ++N LLL+ L +++N P + H D V +I VIV+G +F
Sbjct: 141 KGFPESYNMELLLSFLDSIKNGQDFQIPVYSHETYDIVPQEIQEVKAADFVIVEGINVF 199
>sp|A7Z6C4|COAA_BACA2 Pantothenate kinase OS=Bacillus amyloliquefaciens (strain FZB42)
GN=coaA PE=3 SV=1
Length = 319
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 103 NVNVKH--------IVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQD-------- 146
NV +KH I+G+AG GKST A + + ++++ + S + D
Sbjct: 77 NVFLKHPHSAKIPFIIGIAGSVAVGKSTTARILQKLLSRLPDRPKVSLVTTDGFLYPTAE 136
Query: 147 --PKEAHARRGAPWTFNPLLLLNCLKNLRN-QGSVYAPSFDHGVGDPVEDDILVGLQHKV 203
K +R+G P +++ LL L ++++ + V AP + H D E + V +
Sbjct: 137 LKRKNLLSRKGFPESYDVKALLEFLNDIKSGKERVEAPVYSHLTYDREEGAVEVVEGADI 196
Query: 204 VIVDG 208
VI++G
Sbjct: 197 VIIEG 201
>sp|Q75JI3|NSF_DICDI Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1
Length = 738
Score = 35.4 bits (80), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 78 VEARCMDEVYDALAQRLLPTSALASNVNVKHIVG--LAGPPGAGKSTLAAEVVRRINKIW 135
++A D A + R+ P A+ + V H+ G L GPPG GK+ +A ++ + +N
Sbjct: 227 LDAEFRDIFRRAFSSRIFP-PAIVKKLGVNHVKGMLLYGPPGTGKTLIARQIGKMLNGRE 285
Query: 136 PQKAS 140
P+ S
Sbjct: 286 PKVVS 290
>sp|Q07PZ0|PHNC1_RHOP5 Phosphonates import ATP-binding protein PhnC 1 OS=Rhodopseudomonas
palustris (strain BisA53) GN=phnC1 PE=3 SV=1
Length = 279
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 12/88 (13%)
Query: 95 LPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQDPKEA---- 150
L ++ ++ IVGL GP GAGKSTL +R +N++ P S D +
Sbjct: 16 LALKGVSLHIGAGDIVGLIGPSGAGKSTL----IRCVNRLVPPTGGSIRLGDTELTRLGG 71
Query: 151 ----HARRGAPWTFNPLLLLNCLKNLRN 174
ARR F L+ L + N
Sbjct: 72 ADLRRARRRIGMIFQEFALIERLTVMEN 99
>sp|Q6FUM2|YFH7_CANGA ATP-dependent kinase YFH7 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YFH7 PE=3
SV=1
Length = 345
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 28/107 (26%)
Query: 146 DPKEAHARRGAPWTFNPLLLLNCLKNLRNQG----------------------------S 177
DP+ AH RRG+ TF+ L + + S
Sbjct: 169 DPQWAHLRRGSSLTFDSNNFLKLCEIMAKTSRIFPSIGYDGDDFTAFDAISSSFDCSVPS 228
Query: 178 VYAPSFDHGVGDPVEDDILVGLQHKVVIVDGNYLFLDGGVWKDVSSM 224
V P FDH + DP + + ++VI +G YL + W + ++
Sbjct: 229 VEVPGFDHSLKDPQPSQHTISFKSRIVIFEGLYLLYNKENWSKIYNI 275
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 90 LAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIW 135
L + ++ + N + +V + GPPG+GKST+A ++ IN +
Sbjct: 7 LKEEVIASYREICKENYRLLVFIVGPPGSGKSTIAEKLKDAINTSY 52
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,442,109
Number of Sequences: 539616
Number of extensions: 3681764
Number of successful extensions: 23125
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 219
Number of HSP's that attempted gapping in prelim test: 22927
Number of HSP's gapped (non-prelim): 349
length of query: 229
length of database: 191,569,459
effective HSP length: 113
effective length of query: 116
effective length of database: 130,592,851
effective search space: 15148770716
effective search space used: 15148770716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)